LOCUS       DATIAS010000001         3979 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1771440, whole genome shotgun sequence.
ACCESSION   DATIAS010000001 DATIAS010000000
VERSION     DATIAS010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1771440"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VLA74_00005"
     CDS             complement(<1..1015)
                     /locus_tag="VLA74_00005"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49116.1"
                     /translation="MDNDFSNYLIDVINKGSLSLMLSIGHRTKLFDVLSTLPPSTIEE
                     IASKSKLNQRYIREWLGGMVTGKIIEYDPVNNKFWLSKEKAQYLTRENNIYNFAASIQ
                     WIPMLAQVEDEIVECFAKGGGVPYSSYKRFDEVMAEESYQTVVVGLIDYILPLVPNLI
                     FDLKQGIKVLDIGCGKGKAVNVMAKHFPRSTFYGYDLSKEAIDEATKEAKHMKNSNVF
                     FKVHDVMDLTFKDKFDLISAFDAIHDQPRPDLVLKNIYQSLSDKGVFLMQDILASTPL
                     KDNISHPLGTFLYTISCLHCMSVSLSQNGAGLGAMWGKEKAVSMLTEAGFSNVEVKTL
                     PHDF"
     gene            complement(1392..1622)
                     /locus_tag="VLA74_00010"
     CDS             complement(1392..1622)
                     /locus_tag="VLA74_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49117.1"
                     /translation="MTVLKISQIEVDEENQQWWFVEPYDEIFKEYDNIDGYPAHIIDK
                     VEEIISNKIGNKKVKVTVFSYKDIIGTYDILD"
     gene            1985..2350
                     /locus_tag="VLA74_00015"
     CDS             1985..2350
                     /locus_tag="VLA74_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49118.1"
                     /translation="MISNQDVSANVRISFNVIPLDDINGKYGFPLFKSYSSYANALID
                     QLEVEMQNSDPTFQLVEKHSDKYLIDGNQASGILSRYSYSLGNTTGMLNLYAIDKTND
                     LLLMYKYILIQIHIFYIYP"
     gene            complement(3118..>3979)
                     /locus_tag="VLA74_00020"
     CDS             complement(3118..>3979)
                     /locus_tag="VLA74_00020"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49119.1"
                     /translation="NQVSSGYIEYDPSTEKYFLPPEHALALSDPNSPIYIQGAFKAIK
                     SYFKDEEEFIKMFKNERTFSWLDHHPSMAEGFAEFFKAGYLGNLLNLWIPSIENGKIH
                     EKLEQGIKVADVGCGYGISTILMAKAFPNSEFIGFDFHKESIEKANNLAKQENLNNVK
                     FEISSASEFLGTNYDFITLFDCLHDMGDPQGALTHVLKTINKEEGVCMIVEPYSQNKL
                     EDNINPISKTFYAASTLICVPNSLAFNGPALGAQAGEERIRDIVRKSGFSHFKRAIDT
                     PINIVYEIKP"
BASE COUNT         1305 a          652 c          537 g         1485 t
ORIGIN      
        1 gaaagtcatg aggtaatgtt tttacttcaa cattagaaaa tcctgcttct gttaacatgg
       61 agactgcttt ttcttttccc cacatagcac ccaacccagc accattttgg gacaacgaca
      121 cactcataca gtgaagacaa gaaattgtat aaagaaatgt tcccagtgga tgcgaaatat
      181 tatctttcaa tggcgttgac gcaagaatat cctgcataag aaaaactcct ttatctgaaa
      241 gagactgata aatatttttt aagaccaggt caggtctggg ctgatcgtgt attgcatcaa
      301 atgctgaaat taaatcaaat ttatctttaa atgttaaatc catcacgtca tgaactttaa
      361 aaaatacatt tgaattcttc atatgttttg cttcttttgt agcttcatca atagcctctt
      421 tagagagatc gtatccgtaa aatgtactcc ttggaaaatg ctttgccatc acattaactg
      481 cttttccctt accacatcca atatcaagga ctttaattcc ctgtttaaga tcaaaaataa
      541 gattaggaac taaaggcaaa atataatcaa tcagacctac cactactgtt tgatagcttt
      601 cctctgccat tacttcatca aatcgtttgt atgaagaata tggaacacct ccaccttttg
      661 caaagcattc aacaatttca tcttctactt gagctaacat ggggatccac tgtatagatg
      721 ctgcaaaatt atatatgtta ttttctctag ttaaatattg agctttttct tttgaaagcc
      781 agaatttgtt attcactgga tcatattcga tgatctttcc agttaccatt cctccaagcc
      841 attccctaat atatctctga tttagctttg actttgatgc aatctcttca attgttgaag
      901 gtggaagtgt agataataca tcaaataact ttgtcctatg gccgatagat aacataagag
      961 atagagaacc tttgttaatc acatcaatca gatagttgga gaaatcatta tccatattac
     1021 ataatccacc tattattcag acttttattt atttcgaagt cttattggat gttagtaaaa
     1081 taacactttg tctagtataa ctaaaatcaa tatttcaatg aaaacaaatc ctctttttac
     1141 gtcaaatgtg cttcacaaat cactggctaa atggtgatat tagtacttct agttttacaa
     1201 gtgaaaattt gatcaaatta atttcttatt gataattcac tttactatac ttttaagttt
     1261 cctagatatg taattcattg attatgaatt cgggtagcta ttgagatttt actacaaaaa
     1321 atgttaattt tgtgattatg aggaaaaatt taatcgagaa aaatatctaa cttatttcaa
     1381 gttgttagtt tttaatctaa tatatcgtac gtgcctatga tatctttata agaaaacaca
     1441 gtaactttta cttttttatt tccaatttta tttgaaatta tttcttctac tttatctatt
     1501 atatgagcgg ggtaaccatc gatattatca tattctttga aaatttcgtc atatggttcc
     1561 acaaaccacc attgctggtt ttcctcatca acttctattt gcgaaatttt tagtactgtc
     1621 atttagtttt caattattta taagtatcat tttatataaa attttaagtt ttcaattgaa
     1681 attcctttta cgtcaaattt ggttcgcaaa ctattgaccc aattaaactc tggcctcgaa
     1741 tccttagaga taaattggaa agtaataata atattttaaa tggtaaaaat ataattagta
     1801 actttatttt tcacattact tttttttgtc tgcttaagtc cccattcatt ttatagttcc
     1861 tgaaaatatc aaatggcttg attataatga tcctgaaggt ctatttactt tagaatttcc
     1921 tgatgaaact gactggaaaa ttgaaaagat agaaaatgaa aaaccttctt tctttaataa
     1981 agtcttgata tctaatcaag atgtttctgc aaatgtacga atatcgttta acgttatacc
     2041 acttgatgat attaatggca agtacggttt tccattattc aagtcttatt cttcttatgc
     2101 taacgccttg atagatcaat tggaggttga aatgcaaaat agcgatccaa cttttcaact
     2161 cgtcgaaaaa cattccgaca aatatttgat agacggaaat caagcatcag gaattttgtc
     2221 tagatattca tattctttgg gaaatactac aggcatgttg aacttgtacg caatagataa
     2281 gacaaatgat cttctattaa tgtataagta tattttgatt caaattcata tattctatat
     2341 ttacccatag ctgaaaaaat actagactct attaaaatta ataaattgaa taaaatttag
     2401 taacttaatg aattttcata agattaatta ctatctgcaa agatcacgtt aatttttttt
     2461 ataaaacatg cctatcatga ttttaatcat taaaaaaatc attattatat tggatatgtc
     2521 tttatttttt catcgactat gttcctattt acttccctaa gattttgact agttttccta
     2581 ttacattttg ccttctatat tgatttgaaa aatatattta aatacaaata gcaaaaagta
     2641 ttctctaggg tcaatataaa aataaccaga ttttgcatcc tatgaagatt gtaagcgata
     2701 catgaatgtt tagcttaatt caacaatgat atctttattt acaaacaaat tatgctacaa
     2761 cgaaataaac tgttttacat catcacgtta ttgcagtcta tgccttctgc atactgaatt
     2821 tgcttgatag taaatggatt ccactactcg atttaatgaa aaaacgattt cagcagtaca
     2881 tctctgtctt gtgttttttt aggtgcttgt atccataata ggcaattttt cgaatacatg
     2941 tacccgttca ttacgtactc tacaacattt cttctgatag atatacaggt tcaatatgca
     3001 atttgtttta attgatgtag taattatata caattatata atcacataat attataggta
     3061 attacttatt tgaaattttt tagtaaaaaa agtagagctt ggaaatactt tataaaatta
     3121 tggtttaatt tcgtatacaa tatttattgg tgtatctata gctcttttaa aatgtgaaaa
     3181 accactcttc cttactatat ctctgatcct ttcctctccc gcctgtgcac ctagggctgg
     3241 tccattaaaa gctagcgaat ttggtacaca tattagtgta gaggcagcat aaaatgtttt
     3301 agatattgga tttatattat cttcaagttt attttgcgaa taaggttcaa ctatcataca
     3361 aactccttcc tctttattga ttgtttttaa tacatgagtc aatgcacctt gaggatctcc
     3421 catatcatga agacaatcaa acaatgttat aaaatcataa ttggtaccta gaaattctga
     3481 tgctgaagat atctcaaatt ttacattgtt taaattctct tgttttgcaa gattatttgc
     3541 tttttcaatt gattctttgt ggaaatcgaa ccctataaat tcggaatttg gaaaagcttt
     3601 tgccatcagt attgtactta ttccataacc acatcctaca tctgccactt tgatcccttg
     3661 ctcaagtttt tcatgaattt ttccattttc tatcgacggt atccataaat ttaataagtt
     3721 acctaaatat ccagctttaa agaattcggc aaaaccctct gccatagatg gatgatgatc
     3781 caaccacgag aaagttcttt catttttgaa catttttata aattcttctt catctttaaa
     3841 gtaagatttt attgctttaa atgcgccctg gatatagatg ggactattag ggtcagataa
     3901 tgcaagtgca tgttcgggag gtaaaaaata tttttccgtt gaaggatcat attctatata
     3961 tccactagaa acttgattt
//
LOCUS       DATIAS010000002         2053 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1635314, whole genome shotgun sequence.
ACCESSION   DATIAS010000002 DATIAS010000000
VERSION     DATIAS010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635314"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VLA74_00025"
     CDS             <1..316
                     /locus_tag="VLA74_00025"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSF49120.1"
                     /translation="NLNHISPDMSRYIIEFAFGEIYNRKGLDLKAREIVTISSLLTMG
                     NAKPQLKSHIHGALNIGCSREEILEIMIQISLYSGFPAALNGLEVMKNVFDERDKKGT
                     YP"
     gene            1283..1648
                     /locus_tag="VLA74_00030"
     CDS             1283..1648
                     /locus_tag="VLA74_00030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49121.1"
                     /translation="MVAIWSLLSNLTLLNDVFAEIPNNTTTKSIKNTSDSFENVLSNL
                     PLVINITKNSNATDTVIDFVIDEVNSSVVDSSILQQIAQERIPLLIETLKNTNATSIV
                     AEYVLNATKASVLENNQIE"
     gene            complement(1704..>2053)
                     /locus_tag="VLA74_00035"
     CDS             complement(1704..>2053)
                     /locus_tag="VLA74_00035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HSF49122.1"
                     /translation="YSKGITGPPRPGRKIGISGDTRPTLKLTNFFKNSDVLIYEATFL
                     HKDIEKAKESFHSTAFEAALLAKNSNIKKLILTHFSARYRDIAPIESEARKIFENVYI
                     ANDLDVFIIPYTK"
BASE COUNT          701 a          322 c          284 g          746 t
ORIGIN      
        1 gaatttaaat catatttcac cagacatgtc tcgatatatc atagagttcg cttttggaga
       61 aatatataat agaaaaggtt tggatctcaa agcaagagaa attgttacaa tatcttctct
      121 tttaaccatg ggtaatgcaa aaccacaatt aaagtcacat attcatggtg ctttaaatat
      181 tggttgctcg cgtgaagaaa ttctagaaat aatgatccag atatctttat attctggatt
      241 tcctgctgct ttaaatggat tagaagttat gaaaaatgta ttcgatgaac gagacaaaaa
      301 gggaacctat ccataaataa acgagacaat aattcctaat aattatattt ttgcattgta
      361 cctacaactt tctattacaa taccactact tgattattcc ttcactttaa ttctttttac
      421 taattgctac ttagaactta atacgaaaaa tagccaactt tcaaattgac gtcctcgttc
      481 agtaaatatg atttgccatc tttaagaatg acgcataccc ttatctggtt catcttttat
      541 taatttcaat acaatatttt tctgccaatt acgaagttca ctggatcaca gtgtattgat
      601 caagacgtta acgaagtgtt agaattgttt ttagcaattt tatttcagaa cattgtattt
      661 caaaatatag ttcttctatc tccgctttgg taaacccaat cattaatgga caatctgaat
      721 ttaggaattt ttagtgaata ttgtatatca atcaaaattc taaattcacg atacccataa
      781 aaaaattccg ataaaaattg ttacttccca atttcactgc aaggcaatcg aataacttga
      841 ctcggacaag ttctatgatc taattcgata gcatttttct ggtgtattat gtcttattac
      901 ctgagatatg ctaccatttt gattgtcaac agtgggtttg atcttggaat gatgataaga
      961 tgacaacttt tcttcctttc aacataattt ctaattaatt aattaaaaaa ctataacttc
     1021 agattgaata attcatctta tttttcacat ttcttatact aaggtgaatt ttctttggtt
     1081 tagataagaa tatataaaat tctgcactag actgtcatca ctaaatgtat aaaaagttaa
     1141 accttatatt aaaattgttc ttagcgttaa gaagtgttaa aattatgtta ccacatagtc
     1201 aaaaaataaa ttagaaaaat taataaattt ctaaattagt aataccttaa tgaacatgcg
     1261 agtaatacat aaattaattg tcatggttgc aatatggtct ctgctctcaa atttgactct
     1321 attaaatgat gtatttgcag aaataccaaa taatactaca acgaaatcta ttaaaaatac
     1381 ttctgattct tttgaaaatg ttctatctaa tttgccactg gtaataaata ttacgaagaa
     1441 ttctaatgca acagatacag ttatcgattt cgttatcgat gaggtaaata gtagtgtggt
     1501 agatagttca atattgcaac aaatagcaca ggaaagaatc ccactattaa tcgagacgtt
     1561 gaagaataca aatgctacga gtattgtggc agaatacgtt cttaacgcaa caaaagccag
     1621 cgttttagaa aataatcaga tcgaataata ttattttttc ttttcatcga tttttatctg
     1681 attgcttttt attatttttc tccctattta gtatagggaa ttataaaaac atccaaatcg
     1741 tttgcaatat atacattttc aaagatcttt ctagcttcgc tttctatcgg agcgatatcc
     1801 ctgtatcttg cactaaaatg tgttaatatt agttttttaa tattagaatt cttcgctagc
     1861 aaagcagctt cgaaagcagt tgagtgaaaa ctttcttttg ccttctcgat atccttgtgt
     1921 aaaaaagtcg cttcatatat taaaacatct gaatttttga agaaatttgt caattttaat
     1981 gtaggtctcg tatctcctga tattcctatt tttcttccag gtcgcggtgg ccctgtaata
     2041 ccttttgaat ata
//
LOCUS       DATIAS010000003         2446 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_681823, whole genome shotgun sequence.
ACCESSION   DATIAS010000003 DATIAS010000000
VERSION     DATIAS010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681823"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..632)
                     /locus_tag="VLA74_00040"
     CDS             complement(<1..632)
                     /locus_tag="VLA74_00040"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF49123.1"
                     /translation="MKIRFERNRTLTFIVMYSLYLYFLGLILRNTSKALAIFRDDNKR
                     SYVSVWNWVQRFGSCQIYKRKRVSAFIIDETVIQIGNQHFWLWICIEPIHSSVLGVDI
                     SEERNMLIAEKFIRSLVSQYGRHTVYTDGGTWYPEACKVLGLKHYLHSPFQKSLMERV
                     NQYFKDRTESFDDYYPCIANECNLFHVYNWLQFFISMYNDTIANNNNCFE"
     gene            885..1202
                     /locus_tag="VLA74_00045"
     CDS             885..1202
                     /locus_tag="VLA74_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49124.1"
                     /translation="MYSLYLYFLGLSLRNTSKALVIFKDEKRSYVSVWNWIQRFGSLQ
                     IYKRKRVTAFIIDETVIQIGSQHFWLWIAIEPIHSSVLGIYISEERNMLCLLLKNSFD
                     LLY"
     gene            1163..1498
                     /locus_tag="VLA74_00050"
     CDS             1163..1498
                     /locus_tag="VLA74_00050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49125.1"
                     /translation="MLVAEKFIRSLVLNYGKHTVYTDGGTWYDVEAYHVLRLKHYLYS
                     SIEKSLMERVNQYLKDRIESFDDYYPCMQIECNLLHVQNWIQFFVSMYNDTIANNNNY
                     FELEEVNIS"
     gene            complement(1665..>2446)
                     /locus_tag="VLA74_00055"
     CDS             complement(1665..>2446)
                     /locus_tag="VLA74_00055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49126.1"
                     /translation="RIISILNSSENFAYVGDYEEEGYNDYDDIIRYDWIEKLDVTSSK
                     TNYLIGNNIEKQEEDIDDNELEETRRVQLNTILWLPNSSFASSSLSSNKKKKYSRKSN
                     KNEEFVPYRVLGNLSIKGKIMNVSCMSDKLLKKCNDIINNIAGKYLIYLGDKYTELQH
                     DTKENELDVNLKQKSKDNNMISHASEKDLYKYSTEDEIPPAITKQIDGFFEKYYENWI
                     NMKIPYLDNMAPLEIINTKEGREKIEDILRDIENEYARSAI"
BASE COUNT          831 a          390 c          330 g          895 t
ORIGIN      
        1 aactcaaaac aattattatt atttgctatt gtatcattat acatagatat gaagaattgt
       61 aaccagttat acacgtgaaa tagattgcat tcatttgcga tacatggata gtaatcatca
      121 aaagattcag ttctatcctt gaaatactgg ttaactcttt ccatcagact tttctgaaat
      181 ggtgaatgta aatagtgttt caatcctaat accttacatg cttctggata ccatgtaccg
      241 ccatctgtgt aaactgtatg tcttccatat tgtgatacaa gagatctaat gaatttttca
      301 gcaataagca tatttctctc ctctgaaatg tcgacgccaa gcacagaact atgaattggt
      361 tcaatacata tccatagcca gaaatgctgg ttaccaattt gaataacagt ttcatctatt
      421 atgaaggctg atactctttt tcttttatag atctgacagg atccaaacct ttgaacccag
      481 ttccatacag aaacataact tctcttattg tcgtctctaa atatcgctaa ggccttggaa
      541 gtatttctta aaattagacc aagaaagtat agataaagag aatacataac aataaaggtt
      601 agggttctgt ttctctcaaa tctaattttc atatcataaa gagaacgtgc ctagctatag
      661 cttttactgc ttaacttaac agagccgatt ttaaatataa aatacacgtt aaaactaatt
      721 ttctattgca gtttaaaaaa acaatagcag tatttctcaa aagtaaaata tttgtcatct
      781 ttttaggctc tgttaagtta agcagtaaaa gctatagcta ggcatgttct ctttataata
      841 tgaaaattag atttgagaga aacagaacac ccacttttat cataatgtat tctctttatc
      901 tatactttct tggtttgagt ttaagaaata cttctaaagc gttagtcatt ttcaaagatg
      961 aaaaaagaag ttacgtgtct gtctggaact ggattcagag gtttggttct ttgcagatct
     1021 ataaaaggaa aagagtaaca gcattcataa tagatgaaac tgttattcag attggtagcc
     1081 aacacttttg gttgtggata gcaattgaac caattcactc ttcagtgctt ggaatctaca
     1141 tttcagaaga gagaaatatg ctatgcttgt tgctgaaaaa ttcattcgat ctcttgtatt
     1201 aaactatgga aaacatacag tttacacaga cggtggtaca tggtatgatg ttgaagcata
     1261 tcatgtactg agattgaaac actatctata ttcttcaata gagaaaagtc taatggaaag
     1321 agtcaaccag tatttgaaag acagaataga aagttttgat gactattatc catgtatgca
     1381 aattgaatgc aatctattac atgtacaaaa ttggatacaa ttttttgtat ctatgtataa
     1441 tgatacaata gcaaataata ataattattt tgagttagag gaggtgaata tatcttaaat
     1501 taacagagcc cattttatta tcatttaaca ggatttattc atacggtata agttttttga
     1561 taataaacca ataatacaaa taatttttaa tcaaccaacc aatcaatcaa ttaatcaaca
     1621 cccaaccttt ttctaatctt ttcaacagga aaaaaaggca aatctcatat agcagatctt
     1681 gcatattcat tttcaatatc tctaagtatg tcttctattt tttctctacc ttcttttgtg
     1741 ttaataattt caagtggggc catgttatcc aaatatggta ttttcatatt aatccagttc
     1801 tcataatatt tttcaaaaaa accatctatt tgttttgtta ttgcaggtgg gatctcatct
     1861 tcagtactat atttgtaaag atctttttcc gaggcatgac taatcatatt attatcttta
     1921 gacttttgct tcaaattaac atctaattca ttttcttttg tatcgtgttg taattcagta
     1981 tatttatctc ctagatatat aagatattta ccagcaatat tattaattat gtcattacat
     2041 ttttttaata atttatcgga catacatgaa acattcataa tttttccttt aatcgacaaa
     2101 ttaccaagaa ccctatatgg aacaaattct tcatttttgt tacttttacg tgaatacttt
     2161 tttttcttat ttgaagacaa agaagaagaa gcaaaagaag aattaggcaa ccataatatt
     2221 gtatttaatt gcactcttcg tgtttcctct aattcattat catcaatatc ttcttcttgt
     2281 ttttcaatat tattaccaat tagataattt gttttactac tggtaacatc taacttttca
     2341 atccagtcat atcgtattat atcatcataa tcattatatc cttcttcttc ataatctcca
     2401 acatacgcaa agttttctga agagtttaat attgatatta tcctac
//
LOCUS       DATIAS010000004         4866 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1771896, whole genome shotgun sequence.
ACCESSION   DATIAS010000004 DATIAS010000000
VERSION     DATIAS010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4866
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1771896"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VLA74_00060"
     CDS             complement(<1..358)
                     /locus_tag="VLA74_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49127.1"
                     /translation="MVFKTIFLKLGNPSNTNINISEHDYTLLFANIAAILGHSDYFAA
                     RELSKEINSIFYFYLKFFEGLNKKNIDNVISLENNLQTLDGMGKNKERPAELMKLVHL
                     DIHHMMQNIYSLKIKQP"
     gene            complement(792..1679)
                     /locus_tag="VLA74_00065"
     CDS             complement(792..1679)
                     /locus_tag="VLA74_00065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49128.1"
                     /translation="MKSMGFKIISSISLSLTLTLVLFYGNANAHTFSNDESASFLITI
                     DEIKAQGDLIQVAIDSKDTKSITSHMNKLKDLYSEDIKEEIAEKNKRISTEIYSIINS
                     LNSTNYDELDIKSKIQDLNDVLDESISIRLPVGVENNSTVQALRFAGLINSIDKYYEK
                     AFHKEPISMAQKNEMKKDHSSIMPMNSKYNQTSVIDSTAYDTTKKLLITLKSVFDSIL
                     KQADLKSGDNYLNIINNGIENLTSSINDKKPYEEAMKIIHGIIQPALQEKFNLALEQS
                     LSTKPSNNTKEHLSNMTVH"
     gene            2068..2208
                     /locus_tag="VLA74_00070"
     CDS             2068..2208
                     /locus_tag="VLA74_00070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49129.1"
                     /translation="MDFKTTQAIMYCTKCDEYVVVETNETRSEYFRCSKCSTELIPVL
                     DN"
     gene            complement(2292..2639)
                     /locus_tag="VLA74_00075"
     CDS             complement(2292..2639)
                     /locus_tag="VLA74_00075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49130.1"
                     /translation="MLIKAFPITYDRKRAESAFELLLRHRESELKQIAEDIGYPTSGN
                     HWQEKILLFCLDIDKCFLDLSKEGIQDDEVFKCMNLLKVMAKNKTNIEIQKIQNLAYT
                     ISADFKSFYEKQS"
     gene            complement(2971..3720)
                     /locus_tag="VLA74_00080"
     CDS             complement(2971..3720)
                     /locus_tag="VLA74_00080"
                     /inference="COORDINATES: protein motif:HMM:NF013587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AN1-type zinc finger domain-containing protein"
                     /protein_id="HSF49131.1"
                     /translation="MKCSICGVDNEISFTCNYCKETFCPDHRLPMNHTCRFLKQYIEK
                     RKPMNYNEQRGYKHSNFLRKMLNFRSSRTELYHLGIATILVLLVGLSLTGYRHISYEF
                     ILIFISAFLIHELAHKLLAQLYGSWAEFRAEISGLLITAISAIPFFPFKFIAPGAVVI
                     GDLTRNKFGRVALIGPLTNLIMGFSFLMLSYLFPYYPYFSVGASFNAWISIFNLIPFG
                     VLDGQKIFNWNKIVWICAIISASILFIISYG"
     gene            3890..4225
                     /locus_tag="VLA74_00085"
     CDS             3890..4225
                     /locus_tag="VLA74_00085"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HSF49132.1"
                     /translation="METTNLQKFEKRTENTVRLLAFLEAKKGKGDELWKILHGLIEPT
                     IKEPGNIAYVPHRSIDNPEFFMFDEICEDQNAFEEHFKQPHMQNLEERINPMLEKPLE
                     LRTYYEIKL"
     gene            complement(4248..>4866)
                     /locus_tag="VLA74_00090"
     CDS             complement(4248..>4866)
                     /locus_tag="VLA74_00090"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HSF49133.1"
                     /translation="IIISAHYDDRMEALNNTKARAPGADDNASGVSALLEVARILSNI
                     NLQNNIQIVFFSGEEQGQWGSKSYVKALHTNNTKIDLLVNLDMIGFPPPGELNKEYVI
                     IEYDEWNKVPTNNIDSKKTAEFMKQIALHYTNLIPRLQNLSNSDFNPFEALGYTVIGL
                     HDGGEKYNPHYHKSSDSPDTIDIEYLAAITKLTLATILKLNTNLK"
BASE COUNT         1680 a          693 c          739 g         1754 t
ORIGIN      
        1 ttggttgttt tatttttaag gaataaatat tttgcatcat atgatgaata tctaggtgaa
       61 cgagtttcat aagttcagca ggtcgctctt tatttttacc cataccatct aaagtttgta
      121 aattattttc caagcttata acattgtcaa tatttttctt atttaatccc tcaaagaatt
      181 taagataaaa ataaaatatt gaatttattt cttttgataa ctcccttgca gcaaaataat
      241 ctgaatgacc taatatcgca gcaatatttg cgaacagtaa tgtgtaatca tgttcactga
      301 tattgatatt tgtatttgag ggattaccta gttttaaaaa tattgtcttg aacaccatcc
      361 tttaattcag atgagttaat aaatacaagt aaattagaca tatttgtaac gtcaaaattt
      421 agattcagat atgaggcata cttatttaac ataatatcaa ctagtgtact tattgctaaa
      481 gcattagtag tagcgtttgt cgaatataca tctttatttt atctatctat aaaatcttgg
      541 tcaggtatga actcatcatt aaagtaacgg agatcggtaa ttttaggagg catttcatca
      601 agatgatcta atgataatgt atattggatg gaaaatattt tgttgcaaat tttaatttca
      661 attcgtatgc tttactttgg aaataaaata gtgtcatcca gggtaaaact atgggcataa
      721 gagtaatcaa tttgaaaatt gatcaacaat agaaaaatta gaaatgaaag tagaaaagat
      781 ttatacaatt cctaatgaac cgtcatatta gacaaatgtt cttttgtatt attactaggt
      841 ttagttgata aagattgctc tagggcgagg ttaaattttt cctgtaacgc aggttgaatt
      901 ataccatgaa ttattttcat agcttcttca tagggttttt tatcatttat tgaggatgtg
      961 agattttcaa ttccattatt tattatgttc aaataattat ctccactttt taaatcagcc
     1021 tgttttaata ttgagtcaaa aacagatttc aatgtaatca ataatttttt tgtggtatcg
     1081 tatgctgttg aatcaatgac tgaagtttga ttatactttg aattcatagg cataattgag
     1141 ctatgatcct tcttcatttc attcttctgt gccatactta ttggttcttt gtgaaatgct
     1201 ttttcataat atttatctat agaattaatg agtccagcaa atcttagtgc ttgaacagta
     1261 gaattatttt caactccgac cggtagtctt atcgatattg attcatctaa cacatcgttc
     1321 aagtcttgta ttttagactt gatatctagc tcatcataat ttgtggaatt aagtgaattt
     1381 atgattgaat agatttcagt agagattctc ttattctttt ccgctatctc ttcctttatg
     1441 tcttcactat aaagatcttt tagtttgttc atgtgggatg taatggattt tgtatctttg
     1501 ctatctatcg ccacttgaat tagatctccc tgggctttaa tttcatctat ggttataaga
     1561 aatgaggcac tttcatcgtt actaaaagta tgtgcattag cattgccata aaacaaaaca
     1621 agtgttaagg ttaaagatag agatatagaa ctaattatct taaatcccat acttttcatg
     1681 atattaattt gaatataagt cttaaggaac ttatggaaca tccatgaaat catagaactt
     1741 tataactatg aagatatatt aattacaaga ttttgtccct taaaaattaa taaaacatga
     1801 aaatactttc tctaattaag acttattatt tactttattt tttactttat attttaattt
     1861 cactatcgtc attaaaagta atgaaattat ttttcacaaa taaggatata gatctatggc
     1921 ttttattttc aagttttcct gagaacttaa aagagagtaa atcttttttc ctcatcctat
     1981 aattattatt tcttttttat gaccttctca gtataatttg taaatattta tagacaaatt
     2041 taaaagaaag gaatgagtac tatatatatg gactttaaaa ctacgcaggc aatcatgtat
     2101 tgtactaaat gcgatgaata tgtagttgta gagaccaatg aaacgagatc tgaatacttc
     2161 agatgttcga aatgttctac cgagttgatt ccagtacttg ataattagga aaatgaatgg
     2221 tcttttaatg ccataaactt ttttctttgt aataaaaaaa attcctttat attaaaacta
     2281 caaaaaaatg tctaggattg tttttcataa aacgacttga aatctgccga aattgtgtat
     2341 gcaagattct gaattttttg aatttctata ttagttttat ttttggccat taccttcagc
     2401 aggttcatac atttaaatac ttcatcatcc tgaatgccct cttttgataa gtcaagaaaa
     2461 catttgtcta tatcaaggca gaataataag atcttctctt gccaatgatt tcctgaagta
     2521 ggataaccta tatcttctgc aatctgtttt agctcgcttt ctctatgacg caataagagt
     2581 tcgaaagcag attcagctct ttttctatcg taagttatgg gaaaagcctt gatcaacatc
     2641 ttttagttta ttcaaaggtg ttaatattat ttttgctgaa attaatatat caagtacaga
     2701 ggattgtagt aacagaacca tacagttcaa ttatctatca cgacaatggc tgctggcaac
     2761 acaatacaag aattaaattt cctgtccttg gttttacaaa cttgcatgaa agaggttctc
     2821 aaaataacat acttaattta atttaggaca atttcatatt aatagcaaag agtaaaatcc
     2881 aaaaatgaat aaacgaaaaa acaggagacc taataatatg aaataaaatt taaaatttac
     2941 agtaggttta acagtaaata aattttgata ctagccatat gaaattataa agagaattga
     3001 tgcagaaatt atagcacata tccagacaat tttattccaa ttaaagatct tttgtccatc
     3061 caagacgcca aatggaatta aattaaaaat agaaatccat gcattaaaac tggctcctac
     3121 actaaaatag ggataatacg gaaataaata tgataacata agaaaggaaa agcccataat
     3181 caaatttgtt aaaggaccta ttaatgcaac tcttccaaac ttatttcgtg ttaaatcacc
     3241 aataacaacc gcgcctggtg caatgaactt gaatgggaaa aaagggattg cagaaattgc
     3301 agttattaac aaaccagaaa tttcagccct aaattctgcc cagcttccgt acaattgcgc
     3361 tagtaattta tgtgccaatt cgtgtatgag aaatgcactt ataaaaatga gaataaattc
     3421 gtacgatatg tgtctataac cagttagaga taagcctact aatagcacta gtattgttgc
     3481 tatacctaaa tgatacaatt cggttcttga agatctgaag ttcagcatct ttcttagaaa
     3541 gttagaatgt ttatagcctc gttgttcgtt ataattcatc ggtttccttt tttcgatgta
     3601 ttgtttaaga aatcgacagg tatgattcat tggcagtcga tgatctggac aaaatgtttc
     3661 tttacaataa ttgcaggtaa atgaaatttc attatcaact ccacaaatag aacacttcat
     3721 aataataata ttgatataaa tgatctatga attgctatta aatacttttg gtaactggaa
     3781 tagtagttaa caaactgaaa tgataacata gaataaatta tgagttcaat atattatgta
     3841 tttaagaata ttagttattt atttattata tttgacaata tattattgta tggagacaac
     3901 taatttgcag aaatttgaaa aaagaacaga gaatacagta aggttactag catttcttga
     3961 agcaaaaaag ggaaaaggag atgaattatg gaaaatttta catggcttaa tagaaccaac
     4021 aattaaagaa cctggaaata tagcttacgt gccacatagg tcgatagata atccggaatt
     4081 ttttatgttt gacgaaattt gtgaagacca aaatgctttt gaagaacatt tcaaacaacc
     4141 gcatatgcag aatttagaag aaagaattaa tccaatgcta gaaaaacctc tagaattaag
     4201 aacatattat gaaataaagt tgtaaaatcc tcgagtgttt tgactaatta ttttaagttt
     4261 gtattgagtt tcagtattgt ggctagtgtc agctttgtaa tggccgctaa atattcaata
     4321 tcaatagtat ctggactatc agatgattta tggtaatgtg ggttgtactt ttcacctcca
     4381 tcatgtaaac ctattactgt atatccaagt gcttcaaatg gattgaaatc actattacta
     4441 agattttgta atctgggaat aagatttgtg taatgtaaag ctatttgttt cataaactct
     4501 gctgtttttt tagaatctat attattcgta gggactttgt tccactcgtc atattcaatt
     4561 atcacatatt ctttatttag ttcacctgga ggtgggaatc caatcatatc taagttgact
     4621 agtagatcaa tctttgtatt attggtatga agagccttta catagctttt tgatccccat
     4681 tgtccttgtt cttcaccaga gaaaaataca atttgaatat tgttttgtaa attaatatta
     4741 gaaagtattc gagctacttc tagcagggca gagacaccgc tagcattatc gtccgcacca
     4801 ggagctctag ccttagtatt gtttagtgcc tccattctgt cgtcataatg tgccgaaatt
     4861 attata
//
LOCUS       DATIAS010000005         5469 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_784, whole genome shotgun sequence.
ACCESSION   DATIAS010000005 DATIAS010000000
VERSION     DATIAS010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5469
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(279..641)
                     /locus_tag="VLA74_00095"
     CDS             complement(279..641)
                     /locus_tag="VLA74_00095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49134.1"
                     /translation="MTYREMAGKTKKNDEKNDEHSIDSPIPNPFTSMIEFWQKYSTNW
                     MEQYGEFIKDIQRIGELQKESLKNTQRMSELYKELVGTVENMNLLYKESVKITERMTR
                     YWVDYSKSFFQKEKEGSD"
     gene            complement(805..1524)
                     /locus_tag="VLA74_00100"
     CDS             complement(805..1524)
                     /locus_tag="VLA74_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49135.1"
                     /translation="MIIIQSTILLILLLPLELFGQNTIPKAIENTNLDNIETKYSESE
                     QDKGITIGTIKEYAEVISIFLEVIIIILLAKTVKDFAELAKVSKLQTEVRFRPWVGPH
                     GGIEFMRSDNDNKQYFIKIKNFGEIPASKVTAISIVADSVPKKDFLSTVTKNNFFDSK
                     NKENNVDKFSIGPLLPGMEKKYWVFIKEAMIKNAKEGTSDLFISFYFSYDFAGGKSGY
                     GMISKFDKNTDTFVHIDMWID"
     gene            2651..4237
                     /locus_tag="VLA74_00105"
     CDS             2651..4237
                     /locus_tag="VLA74_00105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49136.1"
                     /translation="MPIPGIDVLLGRKISKKEIEDNNLFLLIGPRAVGKTTYCKTFLA
                     ESLANNNHVIYISSNIMLKQFRNFFPNVKSDTILSNSLFVNPFLKEDIDDLNIHNKLN
                     IDNKLFSTLKEVEQRFLEIDKDSKNDKEQNSRIPDHLETSKDKENLAYIDSSTSKDSY
                     SNDIVLVLDSISHLCTIFDEKDVLRFINLLSLFLKSKGIKSIFTVNNLTLDENIIEKV
                     STLFDTILEMKIEEGKNTEDSKRMIRIASFTGEKIPSKWVNIHTNGNGRLLFQGPSSS
                     KKVSLICSVCKKPITENPVFHQDMAFHKNHLEVYVKLHGIYGDSGMTNIGQSTVLNAN
                     FFFIDIVGLSNPLLSVRKQIQKIELLNNLISICPAFRKNTEKKVLATGDGMAIGFISN
                     PEAPLELSIQLHNELRKHNENAFDDDSKLGIRIGLASGSVFIVNDINNNQNIWGPGII
                     FARRVMDIGDGWHILLEGALAENLILLDHKYKEIIHYIGDHQIKHGQVIKMYSAYDDK
                     NFGNSELPQKFQSLTKKVAF"
     gene            4545..5438
                     /locus_tag="VLA74_00110"
     CDS             4545..5438
                     /locus_tag="VLA74_00110"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSF49137.1"
                     /translation="MKKCIAFHSYKGGTGKSTMSSNIAALLTRRGLNVLLLDMDVYAP
                     SLQTYFNTSPDKWINDFLFEVADFDEVVYDLTNKVENFSEQFNHNENLRMGKLFVSFS
                     NSSKNEIAKLDGAIRSDSSKVELLRKFIHIKEEMASKKNIDYIIIDTSPGIRYWSINS
                     LAIADMILLSLKMDGIDIAGTRRMASEIYSTFMKLGVKSYLLLNRVAGYCLPPNLQGH
                     SYTPESNYAVVLNEQSETIEKLKKDLAMDVMSSVPCYCDIQFDSREFMTVLKHPKHPF
                     TAKMNELIDKIENLELKGDNE"
BASE COUNT         1937 a          806 c          803 g         1923 t
ORIGIN      
        1 atttttttgt ttgtcttggg ttcctaaaag aaatttagag atttctataa ttttcatata
       61 atatttagga ttggtcaaaa aatagatttt atcatacgaa aatacctttc ataaatgata
      121 tctaatgaat atttctatgc atttttacgt tacgattttt ttgatatatt cacatctaca
      181 taaataaaga agctacaaaa cagatgtgct tatgaatata aaatttatta atattttcca
      241 tgcattttgt aagactttag tatcaaatat aatttatttt agtcggaccc ttctttttct
      301 ttttgaaaga aagattttga ataatctacc caatatctgg tcattctttc tgtaattttt
      361 acagattctt tgtataatag attcatattt tcgacggtac ctactaattc tttatataat
      421 tcactcatcc tttgagtatt tttcagagat tctttctgta actccccaat ccgttggatg
      481 tcttttataa attctccata ttgttccatc caatttgttg aatatttttg ccaaaattct
      541 atcatggaag taaaaggatt aggaatagga ctatctattg agtgttcgtc atttttttca
      601 tcattttttt tagttttacc ggccatctct ctatatgtca aaatattata gacatccaag
      661 atttaattct ttttttaaga aatttaaaac aagtagatca aaattactgc taaaatctta
      721 gaattatttc ttttgtcgaa gacaatatta aaaggaaata taagaagacg tctcatacta
      781 ccaaaaacga atagtttcat gcatctagtc tatccacata tcgatatgaa caaaagtgtc
      841 tgtattttta tcaaatttac ttatcattcc atatccgctt tttccaccag caaagtcata
      901 ggaaaagtaa aatgatataa atagatcaga tgttccctct tttgcgtttt ttatcattgc
      961 ttcttttatg aaaacccagt attttttctc cataccggga aggagaggtc caatactgaa
     1021 tttatcaaca ttattttctt tatttttact atcgaaaaaa ttgtttttcg ttacggttga
     1081 caaaaaatct tttttgggca ccgaatctgc tactatggaa attgctgtaa ctttagatgc
     1141 gggtatttct ccaaaatttt ttattttaat aaaatactgc ttgttatcat tatcacttct
     1201 cataaattct attccaccat gaggacctac ccaaggtcta aaccttactt ctgtttgtaa
     1261 tttactcacc ttagctaact ctgcgaaatc ttttaccgtt ttcgctaaaa gtatgataat
     1321 tattacttca agaaaaatac ttattacttc cgcatattcc tttatagttc ctattgttat
     1381 tcctttatcc tgttcagatt cagaatactt agtttctata ttgtctaggt ttgtattttc
     1441 tatggccttg ggtatggtgt tttgaccaaa tagttcaagc ggcaacaaaa gaatcaaaag
     1501 tatagttgat tgtataataa tcaaacaaat taatttactc caattttttt gtttgtagtc
     1561 agttaacaat agctttattc attgttggta tcaagttcgc ttacttattt ttttccaaat
     1621 ttccttcaaa tctttccttt ctatatataa atcgtttcgc gcagaaaata cttcagatgc
     1681 aagatgcaag aacaatgata gaataataaa gcatgaaact atgacaaaag aaccagcgat
     1741 ttttataaaa ctattttgct gctgactatt ttaatatcgt attccactag aatatataca
     1801 atgtaaatta tcttttagga tgttttgata taataatgcg aatacatatc tggtttattt
     1861 ttttggctta tttttatgaa tttttaataa aattttttat tgatcatagt ttgtaaactt
     1921 gacctttttt cataattaga aagctatagc catattcatc atttctagga caattcgtta
     1981 tacatttgct aaattacggc gtattatatg aaaagccatt attgttcagg tcttttactg
     2041 gattgcaatt atcgcaattg attcaatata caatcaatta gaatgaaaat atccaatata
     2101 ttagataaaa catttatcca aacagaagaa aatgagatgt atagatgcag gaagaaagac
     2161 atttcaaaaa ttcagtaaag gacagatttc taatatatct tgtatattac aaatcataca
     2221 caagtaacta attcattatc atgatttttg tttgacctag atcataggaa catatataga
     2281 gatgtacgat atgaacctag taaaaagtta tgttccgata cctcaaaagt tataccatct
     2341 tacaagaaga ttaggaactt tagatagagg aattagagat ttgctatgta gaatttaaag
     2401 atagtatatt ttgaataaaa cactaagaga tggccggagt taattacatt caaaataaag
     2461 tgtgtatttt atctaattgc aaaagatgta ccggtattat atttttgatg gagactgtta
     2521 tacgtatttt aaaatcctta ttttactacc agtaatcctg taaaaaatat agcagcgaca
     2581 attttatttc aaaaatatat tcttaaacta ataacttaac tataaatatt caggtcaatc
     2641 tctgataatt atgcctattc ctggtattga cgtcttattg ggaagaaaaa tatcaaagaa
     2701 agagatagaa gacaataatc ttttcttact gataggtcca agggctgtcg gcaagacaac
     2761 ttattgtaaa acttttttgg ctgaatccct ggctaataat aaccatgtga tttacataag
     2821 ttccaatatt atgttaaaac aatttcgaaa tttctttcct aatgttaaat cagatacaat
     2881 tctttctaat tctctttttg tcaatccttt tctaaaagag gacatagatg atttaaatat
     2941 tcacaataaa ttaaacatag ataataaatt attctcaact cttaaagaag tcgagcaaag
     3001 atttttagaa atagataaag atagtaaaaa tgataaagaa caaaactcgc gtatccctga
     3061 tcatctggaa acatcaaaag ataaggaaaa tctcgcctat attgatagtt caacaagtaa
     3121 agatagttat agtaatgata ttgttttagt actagattca atttcacatc tatgtacaat
     3181 ttttgatgaa aaagacgtat tacgttttat taatctatta tctctctttc taaaaagcaa
     3241 aggaatcaaa tccatattta cggtaaataa tttaacactt gatgagaaca ttattgaaaa
     3301 agtgagtacc ttatttgata caatactgga aatgaagata gaggaaggta aaaacactga
     3361 agatagtaaa agaatgatcc gaatagcctc gttcacagga gaaaaaatac cttcaaaatg
     3421 ggtcaatatc catactaacg gtaatggaag attgcttttt caaggaccgt cttcatcaaa
     3481 gaaagtatcc ctaatctgta gcgtgtgcaa gaaaccaatt actgaaaatc cagtttttca
     3541 ccaagatatg gcttttcata aaaatcattt agaagtctat gttaaattgc atggaattta
     3601 tggagactct ggaatgacca acataggaca gtccacagtt ctgaatgcaa actttttctt
     3661 tatagatata gtaggacttt caaatccgtt gttatctgta agaaagcaga tacagaagat
     3721 agaattacta aacaatttga tatctatctg tcctgctttt cgaaaaaata ctgaaaaaaa
     3781 agtgttggca acgggtgatg gtatggcaat aggattcatc tcaaaccctg aagctcctct
     3841 tgaactaagt atccagttgc ataatgaact acgcaagcac aacgaaaatg cttttgatga
     3901 tgattccaaa cttgggatca gaattggctt ggcgtctggg tccgtgttta ttgtcaatga
     3961 tattaacaat aatcagaata tttggggtcc tggtattata tttgcaagaa gagttatgga
     4021 tataggcgat ggatggcata ttttgttaga aggagcactg gcagaaaatt taatactact
     4081 agatcataaa tataaagaaa tcattcatta tatcggagac catcagataa aacatggtca
     4141 ggtgataaaa atgtattctg catatgatga caaaaatttt gggaattctg aattacctca
     4201 aaagttccag tctttgacaa aaaaagtagc attttaattt aaaaatgatt ataaaacaaa
     4261 catcataata ttgaaagaag attgtaccta ttaaataaga ttaggtatac caataagcct
     4321 tttttttcta atcaaatttg ctaattatct tatcttacag agtaaaatct atctacaatc
     4381 gagtttatgt ataatgtcaa actatagcga ctaactaaat ttcttatatt ctgaaaaaaa
     4441 tggaaaatat gttttcaaat gtctaatcta tttatgagtc aaatttattc ctaaccatcc
     4501 taatatatga aaattttaat aaacactact caattacaat tttattgaaa aaatgcattg
     4561 ccttccattc ttacaagggt ggtacaggta agtctactat gagttcaaat atcgcagctc
     4621 tactaacccg tagaggactg aacgttttgc ttttggatat ggatgtttac gcgccgagcc
     4681 tgcaaactta ttttaacaca tctccggata aatggatcaa tgactttctt tttgaagtag
     4741 ctgattttga tgaggttgta tatgatctta ccaacaaagt agagaatttc tctgagcaat
     4801 tcaatcataa cgaaaattta agaatgggta aactttttgt ttccttctct aattcttcaa
     4861 aaaacgagat agcaaaactt gatggtgcta tacgtagcga ctcgtcaaaa gtagaattat
     4921 tgagaaaatt tattcatatt aaagaagaaa tggcatcaaa aaagaatatt gactatatta
     4981 taattgatac aagcccagga ataagatatt ggtcaataaa ttctctggct attgcagaca
     5041 tgattttact ctctttaaaa atggatggta tagatatagc gggaactaga agaatggcta
     5101 gtgaaattta ttccacattc atgaaattag gagttaaatc atatcttctt ttgaatagag
     5161 ttgcaggcta ttgtcttccc ccaaatcttc aagggcattc atatacacca gagagcaatt
     5221 atgctgtggt tctaaatgaa caatctgaaa ccatcgagaa attgaaaaaa gatcttgcta
     5281 tggatgtaat gagtagcgtg ccgtgttatt gtgatattca atttgatagt agagaattta
     5341 tgactgtatt gaaacatcca aaacaccctt tcacggccaa gatgaacgaa ctgatagata
     5401 aaatagaaaa tcttgaattg aaaggggata acgaataaat ccaatttata attcttttaa
     5461 aaaattatt
//
LOCUS       DATIAS010000006         2183 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_954791, whole genome shotgun sequence.
ACCESSION   DATIAS010000006 DATIAS010000000
VERSION     DATIAS010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954791"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(383..1171)
                     /locus_tag="VLA74_00115"
     CDS             complement(383..1171)
                     /locus_tag="VLA74_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49138.1"
                     /translation="MNSTKFFISVSGTLLLISILASTTTIWQSSVYAQSLGEGTGNTT
                     TVSNSTTSPLKNIGNATAGIVKMDISKLKTVLSTPFTIISGISLIPGLQVSGVNFGDT
                     DISVTVKQIVSGGNATNMTTPVTVTAIRVPVSDLEDLLSLVKDSGLLENKAATSIPGI
                     SNANPLSGLLGGSGDLIGGAQNSDKPLSSVRPFQLLKDIQFGTGSIVGGDWTYPRTIS
                     MGLLDIGSLFGIENNASGPASAHIITIFVVPYVGVTNLSSVPLH"
     gene            complement(1429..1872)
                     /locus_tag="VLA74_00120"
     CDS             complement(1429..1872)
                     /locus_tag="VLA74_00120"
                     /inference="COORDINATES: protein motif:HMM:NF012290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HSF49139.1"
                     /translation="METITKLLIVSVMVVLLGTFLMYGVESNEPNSEIKSLEDALWWC
                     VATVTTVGYGDIVPVTSLGRYVAIVYMGFGISMITILLSTITSNFYKKRIESVERKKD
                     KEELDFFRKAVMDKLSELEKKQNQCLDLFHQLYIKDHEKTNNKNV"
BASE COUNT          788 a          352 c          284 g          759 t
ORIGIN      
        1 atgaatctcc ataaacttct gacaaggata aaattggaaa tagacctaaa aagaaaaatg
       61 tcactcctaa aataacaact aatgatttag cattaataga tataaaagaa ccagtggaat
      121 ccacataaca attatttaaa ttctgcttaa ttaacattat acaaataatt tctgtttttt
      181 cttttcaata aatattagaa acaaaattct gaattttatt ttaaaaataa ttaaaattat
      241 tctgacattt tctaattatt ctacttttcg aaattcaata caatatctct ttaaaaaaga
      301 caaaaaaatt taaacaataa tcagaaataa attgtaaaaa tataacaatt actatgaagt
      361 ggttattata ctaatcatta acttagtgta atgggacact agatagatta gtaacaccta
      421 cataaggaac tacaaagata gttattatat gagcagaagc aggtccgcta gcattgtttt
      481 ctattccaaa caatgagcct atgtctagca atcccatact aatagtccgt ggatatgtcc
      541 aatctccacc tacaatgctc ccagttccaa actgaatatc ttttaacaac tgaaatggtc
      601 ttactgaact taatggtttg tcgctattct gtgcacctcc aattagatca cctgacccac
      661 caagaagacc acttaaagga ttagcattgc taatacctgg aatgctagtt gcagctttat
      721 tctcaagtaa tcctgaatct ttgactagag ataaaagatc ttcaaggtca cttacaggta
      781 ccctaatcgc tgttacagtt actggcgtag tcatgttagt agcattacct ccacttacaa
      841 tttgtttcac agttacagaa atatcagtat ctccaaagtt gactccacta acttgaagtc
      901 cagggattaa gcttattcct gaaattattg tgaaaggtgt agaaagtaca gtctttaatt
      961 tagaaatgtc catctttaca attcctgcag tagcattccc tatatttttt aaaggacttg
     1021 ttgtagaatt ggaaacagta gtagtatttc ctgttccttc tcccagggat tgagcatata
     1081 cagatgattg ccatatcgtt gttgttgatg ctaatataga aatcaataat aaagtacctg
     1141 aaacggaaat gaaaaatttt gtagaattca tatatgaaca ttgaagattt gtctattaaa
     1201 taagtaaatc gtttttttca tcataatact tgaaagagct ttatcatcca taaactaatc
     1261 aaacaaaaat attaaaaaat tgggcttaca tgttgacttg tttatacttt ttttaagaat
     1321 gtatccttca agtataggtt taacaggatg aggatcagta aaaataaagt aattgaaata
     1381 acatatttat aaataatcat attttgttca taccattcaa aattagtatc atacattttt
     1441 attatttgtc ttctcatggt cttttatata taattgatga aataaatcta aacattgatt
     1501 ctgttttttt tctaattctg ataacttgtc catcactgct tttctaaaga aatccaattc
     1561 ttccttgtcc ttttttcttt ctacactttc aattcttttc ttgtaaaaat tacttgtaat
     1621 tgttgataac aaaatggtta tcattgaaat tccaaaaccc atatacacaa ttgctacata
     1681 tctacctaag ctggttactg gaactatatc accatatcct acagtagtaa cggtcgctac
     1741 acaccaccat aaggcatctt ctaaggattt tatttctgaa ttgggttcat tagactccac
     1801 accatacatt aaaaaagttc ctaacaggac taccattaca gaaactatca ataattttgt
     1861 tattgtctcc ataactcgac tttatcaagg atatttgtta agtttactca taaattgaag
     1921 tcaaaatacc gatatttttt attctctggg atatctatta ataataattc aagatttgaa
     1981 aaaatatcta gtcacatggt tataataatt catgtaaaaa ataccaaaaa aaagaaaatc
     2041 gaaattgagt taaagtaggt aatttattct taaatgaaga gttaaatgtc atgtacagta
     2101 ctagattggc aattatagta aactaccatt tgcctctttg agaattattt ctgatagata
     2161 gagctttagc tgagtgtata ata
//
LOCUS       DATIAS010000007         3959 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_137690, whole genome shotgun sequence.
ACCESSION   DATIAS010000007 DATIAS010000000
VERSION     DATIAS010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3959
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137690"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..491
                     /locus_tag="VLA74_00125"
     CDS             <1..491
                     /locus_tag="VLA74_00125"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HSF49140.1"
                     /translation="GYSAILMANFLLSINYNDDDNDNATTEIIVICLEIDKNLANIAK
                     KNIEKAGLSDKIKVINGDALEIIPKLNNNHYRFDLVFIDAVKNQYLEYLKLVEENDLM
                     NKEAAVVVADNVLIYENEMRDYLDYVRNSGRYNSYTTETTLEFTKNVKDALEVSIRAN
                     LD"
     gene            complement(961..1125)
                     /locus_tag="VLA74_00130"
     CDS             complement(961..1125)
                     /locus_tag="VLA74_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49141.1"
                     /translation="MTLSSYYKKDFHFVIVGTVKGESKEGALEILKTIIKKNEEIKDI
                     SELHIFGKTL"
     gene            1271..2101
                     /locus_tag="VLA74_00135"
     CDS             1271..2101
                     /locus_tag="VLA74_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49142.1"
                     /translation="MASEEKTRHRLTLKFFIFSMIIAIIIANAIVIFSDSYSKHSISL
                     WILNITAAIASILGIIAICRYGIHGLHGKSYLFLTLGLISWFSADFTLLYDYYALGIE
                     EQRLVTTTDALWFAGYGFLALHLCITLRSLHIVIKSKVVIVVSIITVLFISYNLVNLL
                     SHDFHIDDDFIVIIVTILYPILDFILIIPSSIILVTLRKDYEQNIPWFLSSLSLLVNA
                     IADDGYVNDFVTGNSENLWFWELFYITDFIIMSGALFWYNKFHISNAIRNVKLSNHHE
                     "
     gene            complement(2339..>3959)
                     /locus_tag="VLA74_00140"
     CDS             complement(2339..>3959)
                     /locus_tag="VLA74_00140"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HSF49143.1"
                     /translation="EDQIEAVNAWIDNNFRGTILYSTGTGKTEIALECAKRFAFVSTS
                     SLSSPPPPLPFLNILLIVPRIILIDQNIKRLVSYGIPKEKIGAYFGEKKEIREITVCT
                     YQSIIRNLDIIRRSNIVIFDEVHLIRDTAKIFRKIFDVVIEDHKKAILGLTATLDETD
                     LSKYHTILTLLPPVKRYPIRKAVNDKRLAKPIVIPLKVNLTEKEQNDYDTYTSKIKKI
                     SNRFKKYDAESMTVLLRKGGFVSGMAKAWFSNVRKRKLLLSCAENKLLSAVNLITTKF
                     PNEKIMIFSETIDSITKLRDMLESQGTKSMIIDSNISSRKRQEILNQWGIEFYPLLSV
                     HTLEIGFDIPQVRIEIILATTSNMNQVIQRIGRVIRKYEGKDLALIYVIYVSDTKDDN
                     IHDVVKKAISTDLLKHKKEEEQGHKKNNTEINEKDILINNDKNSKRIKKEVKGKRLEK
                     AYNIIESTLYEPMIVELKEEEQQKHNDENEQNLNQNQREKRRLFRVRSSNKEKNKYYD
                     VDIENGTCTCPDFKFKLNKCKHIVATELFLF"
BASE COUNT         1265 a          540 c          539 g         1615 t
ORIGIN      
        1 acggatattc agctattttg atggcaaact ttctattaag tataaattat aatgatgatg
       61 acaatgacaa tgctactaca gaaattattg ttatctgttt ggaaatagac aagaaccttg
      121 caaatattgc aaaaaagaat atagagaaag caggactatc agataaaata aaagtaatta
      181 atggcgacgc tttggagatt attcctaaac ttaataataa tcattataga tttgacttag
      241 ttttcataga tgcagtcaaa aaccaatatc tggaatatct taaacttgta gaagaaaatg
      301 acttaatgaa taaagaagca gcagtagtag ttgctgataa tgttttgata tatgaaaatg
      361 aaatgagaga ttatttagat tatgttagaa attctggtcg atacaatagt tatacaacag
      421 aaactacttt agaatttacc aaaaatgtta aagatgctct tgaagtaagt ataagagcaa
      481 atttagacta ggtagaattt gcttaaatct taatgatctg ttaacattag gattctttta
      541 tatttatcta gttagatggt catgtaaaat ctctatgtag tagggttcta ctaccatttt
      601 atatttagct tttatttaaa ttgctttaaa tcatggatta aaatcatatt ctaaagtaaa
      661 aaagaataac aaggctatag aagattgacc attgaggtat atacgacatt cggattgatt
      721 gtcatattat caatttatta tccataattg actatttaat aatttgagat aatttaatca
      781 tcatggtctt tgtcatagtc tgaagataca atttactaag aggtttttat gatttaatat
      841 atcctgccat gactactctg tattttaaag ttataatata tttattagct ataatattca
      901 gaaaatttta taatctattt tgaggttatg attaaattaa agtatatatc ttttatttat
      961 ctagagagtt tttccaaaaa tgtgaagttc acttatgtct tttatctctt catttttctt
     1021 tataattgtc ttgagaattt ccaaggctcc ttctttagat tcacctttta ctgtcccaac
     1081 aattacaaaa tgaaagtctt ttttgtagta ggaagatagt gtcattgtta gtttaactga
     1141 taatattatg actaataaag ttataacatt agtggaacaa acttccttac gttttttgat
     1201 atataaaatt ttatagaaag aaatagttca taaatatata gtactattgt tattgttttg
     1261 tcaataatct ttggcttcag aagaaaagac tagacacaga ttaacattaa agttttttat
     1321 tttctcaatg ataatagcta taataattgc aaatgctatt gtaatatttt cagattcata
     1381 cagtaagcat tctatttctc tttggatatt aaatataact gcagctattg cttcgatttt
     1441 aggtattatc gctatttgta gatatggaat tcatggactc catggtaaat catatttgtt
     1501 tcttacactt ggccttatat cttggttttc tgctgatttt acacttttat atgattatta
     1561 tgcattagga atagaagaac aaagacttgt aactactaca gatgctttat ggtttgctgg
     1621 atatggattt cttgctttac atttgtgtat aacattacgt tccttacata ttgtaataaa
     1681 atccaaagtt gttattgtag tatcaattat tacagtgctc tttattagtt ataatttagt
     1741 taatcttctt tctcatgatt ttcatattga tgatgatttt atagtcataa tagtaactat
     1801 tttgtatcct attctagatt ttatattaat cataccctct tcaataatac ttgtaacatt
     1861 gcggaaagat tatgaacaga atattccatg gtttctttcc tcattatcat tattagtcaa
     1921 tgcaatagca gatgatggat atgttaatga ttttgtaaca ggcaattcag aaaatctttg
     1981 gttttgggag ctcttctata taacagattt tattataatg tcaggtgcat tattttggta
     2041 taataaattt catatttcga atgctataag aaatgtaaaa ttgagcaatc atcatgaata
     2101 ggtacatacg tgtataaata tttatcagta ttttttatat atttagccta tgaaagaaat
     2161 gactaaagtt gaaatttgaa ttttctttta cataaaactt aacctgagca taactaatca
     2221 aaatatgatg ccaaaatttg gaaaacatta gatgatatta attgtcagaa caaagttata
     2281 taataataat ctattttgtt gtcgttgtta tttctacttc tgttattctt cttactattt
     2341 aaaacaagaa taattccgtt gcaacaatat gtttacattt atttagttta aatttaaaat
     2401 caggacacgt acaggtacca ttttctatat caacatcata gtacttattt ttttccttat
     2461 tactacttct aaccctaaac aatcttcttt tttctctttg attttgattg agattttgtt
     2521 cattttcatc attatgtttc tgttgttctt cctcttttaa ttcaactatc ataggttcgt
     2581 atagagtaga ttctattatg ttgtatgcct tttcaagtct tttccctttt acttcttttt
     2641 ttattctttt tgaatttttg tcattgttaa taagaatatc tttttcattt atttcggtat
     2701 tatttttttt atgtccctgt tcttcttctt ttttatgttt caaaagatct gttgatatag
     2761 ccttctttac tacatcatgt atattatcat ctttagtgtc tgatacatat attacataga
     2821 ttaatgccaa atctttaccc tcgtactttc gtataactct ccctattctc tgtatgactt
     2881 gattcatatt agaggttgta gctaagataa tttctattct aacctgtggt atatcaaatc
     2941 ctatttctaa ggtatgtact gataagagtg gataaaattc tattccccat tgattcaaga
     3001 tttcctgtct ctttctagaa cttatgttac tatcaattat cattgatttt gtaccttgtg
     3061 actctaacat atctctaagt ttagtaatag aatctatagt ttcactaaat atcatgattt
     3121 tttcatttgg aaattttgtg gttatcagat ttactgctga caataattta ttttctgcac
     3181 aacttaacaa tagttttctt tttctcacat ttgagaacca tgcttttgcc attccactaa
     3241 cgaaacctcc ttttcttaac aatactgtca tagactcggc atcatatttt ttaaaacggt
     3301 ttgatatttt ctttatttta gaagtatatg tatcatagtc gttttgttct ttttctgtaa
     3361 ggttgacctt taaaggaata actattggtt ttgcaagtct tttatcatta acagcctttc
     3421 ttataggata tcttttgact ggtggtaata atgtaagaat tgtatgatat ttagaaaggt
     3481 ctgtttcatc aagggttgca gtaagaccaa gaatagcttt tttatgatcc tctataacta
     3541 catcaaatat ttttctaaat atttttgctg tatctcttat caaatggact tcatcaaaaa
     3601 tcactatatt agatctccta ataatatcta gatttctaat tatgctttga taagtacata
     3661 cggttatctc tcttatctct tttttttcac caaaatatgc tcctattttt tcctttggta
     3721 taccatatga tacaagtcgt ttaatgttct ggtcgattaa aatgatccta ggaacaatta
     3781 ataggatatt tagaaatgga agaggaggag gaggagaaga tagagaggat gtagatacaa
     3841 aagcaaatct ttttgcgcat tcaagagcta tttccgtctt tccagtccca gtactatata
     3901 gtattgtacc tctaaagtta ttatcaatcc atgcatttac tgcttcgatt tgatcttct
//
LOCUS       DATIAS010000008         3664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1500071, whole genome shotgun sequence.
ACCESSION   DATIAS010000008 DATIAS010000000
VERSION     DATIAS010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500071"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..636)
                     /locus_tag="VLA74_00145"
     CDS             complement(127..636)
                     /locus_tag="VLA74_00145"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF49144.1"
                     /translation="MVNDIESTATDNKIAQNHFKKILIGVDGSEKSFDAAEYAINLAK
                     KYKSELLLIVNILQIEPWYYGEYPHSWGKPEVLEEKYKKEKQEMQNILNKIKDKSDKL
                     NLNSKADVIMTPRTTNPSIALVDYSERNNVDLIVVGTRGRTGFKKMLLGSVASGVVTY
                     AHCPVLVIK"
     gene            845..1798
                     /gene="arsB"
                     /locus_tag="VLA74_00150"
     CDS             845..1798
                     /gene="arsB"
                     /locus_tag="VLA74_00150"
                     /inference="COORDINATES: protein motif:HMM:TIGR00832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HSF49145.1"
                     /translation="MAEIEFANVSLPIAIVLLMMMYPITLKVKYSELLNFKKNAKVMA
                     FTLTINWAIQPFVMAFIAWLFMSVIFSSIITEKLHKEYMMGMIILGLAPCTAMTLVWT
                     YLAKANLSCALLQVSINDLIILVLYVPLGVFLLGATGFSVPLDTLFVSILLYVAIPLG
                     LAALTRRVTIKTEGEEWLETHIIEKVDKITPIGLLVTLVLIFIFQGDKIINFPYHLIL
                     IAIPLILHTYLIFSIGYFGSKKLKIPYPEAAPTAFIGASNFFELAVAVSTILFGVHSG
                     VTLAITVGVLVEVPVMLSLVQIMKRKKAKFQFDISEPSNKF"
     gene            1852..2037
                     /locus_tag="VLA74_00155"
     CDS             1852..2037
                     /locus_tag="VLA74_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49146.1"
                     /translation="MSITVPLAPIFQHPNITSLESTSDLEEGDFTIYEMSSCKNDKSK
                     SKDSLEIIDHYTISKVS"
     gene            2403..2651
                     /locus_tag="VLA74_00160"
     CDS             2403..2651
                     /locus_tag="VLA74_00160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49147.1"
                     /translation="MGKKKKEIKIIKNNSENYTFINDNILDNINNINAEVDVIDGNDN
                     SNKKHDTRIDKKIDSKQMNNKGRKIIGKSMQGHSPIYE"
     gene            complement(2777..3283)
                     /locus_tag="VLA74_00165"
     CDS             complement(2777..3283)
                     /locus_tag="VLA74_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49148.1"
                     /translation="MSYATKHKYLIIMSLFIFFSKYKNYILFNRNLIISGIVAFFAGA
                     IFTQLYSEYDLNNFRNSFITLTIEYGVYIPLFAMLYYIDNKNKYLDNLTNKKNYSLIK
                     QDIKKLLTAFSISEIVFSISKILIHYQLLQISVEPYKASMVGSICAWIIFFVVINYSI
                     KTVKLFKK"
     gene            complement(3319..>3664)
                     /locus_tag="VLA74_00170"
     CDS             complement(3319..>3664)
                     /locus_tag="VLA74_00170"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49149.1"
                     /translation="VNTVIADGAYDNNNNFQHLSFKGIKPVIKVRKNSRFRKTNHYQR
                     NKTVKIQKTDLVKWKDSVGYGQRWIAETIFSCMKRMFGREYVTAIRFENMIKEMILKV
                     SLYNLFQSLTIT"
BASE COUNT         1255 a          538 c          481 g         1390 t
ORIGIN      
        1 attaattatt gtgatgtttt attctaaaat atgctatgct aatctaaagg agacatatgt
       61 gaccactctc ctattcttgc aaaaaaagaa ttgaaaataa tatcattatt aaataattca
      121 tatacactac tttataacta atactggaca atgtgcatat gttactactc cactagccac
      181 actcccaagc agcattttct tgaagcctgt tcttcctctt gttcctacaa caatgagatc
      241 aacgttattt ctttcagagt agtctaccaa tgctattgat ggattagttg tacgaggagt
      301 cataattaca tctgctttag aatttagatt gagtttatca gatttatctt ttattttgtt
      361 tagaatattc tgcatctctt gcttttcttt tttgtatttt tcttcaagta cttcaggttt
      421 tccccaacta tgtggatatt caccataata ccaaggctct atttgaagaa tatttacaat
      481 tagtaacaat tcacttttgt attttttggc taaatttatt gcatattcag cagcatcaaa
      541 tgacttttca gacccgtcta ctccaattag aattttttta aaatggtttt gtgctatttt
      601 gttatcagta gcagtacttt caatatcatt aaccaattta gatacaaggt aatagtaata
      661 ttaaataaaa atttataatg acaatattgc aataatacat atataactcg aaaggaacct
      721 aaaatttcaa aaatttacaa aaaggaactg gatgtattta acaaatatct ctctcgatat
      781 gggtagcaat ttgtattgta tctggaacct tactaggata tctttttcct tatctatcta
      841 ctccttggca gagattgagt ttgctaatgt ctcacttcct atagcaatag tacttttaat
      901 gatgatgtat ccaattacgc taaaggtaaa atattcagaa ctgttgaact ttaagaaaaa
      961 tgcaaaggtt atggctttca cattgaccat aaattgggca atccaacctt ttgtaatggc
     1021 ttttattgct tggttgttta tgtctgttat tttttcttct ataattactg aaaaattaca
     1081 taaagaatac atgatgggta tgataattct tggacttgct ccttgtacag caatgacact
     1141 tgtatggaca taccttgcta aggctaatct tagctgtgca ctacttcaag tatcaataaa
     1201 tgatctaatt atccttgttc tttatgttcc tcttggtgtg tttttgcttg gagccactgg
     1261 gttttctgtt cctcttgaca ctctttttgt ttcaatttta ctgtatgttg caataccttt
     1321 gggattagcc gcattaacac gacgggtaac aatcaagaca gagggagaag aatggcttga
     1381 aactcatata attgaaaaag ttgataaaat tactcctatt ggtcttttgg taactctagt
     1441 tcttattttt attttccaag gtgataagat catcaatttt ccttatcact tgatattaat
     1501 tgcaattcct cttatacttc acacttatct aatcttttca ataggatact tcggatcaaa
     1561 aaagttgaaa ataccttatc cggaagcagc acctaccgct ttcattggcg caagtaactt
     1621 ttttgaactt gcagtagcag tatctacaat tttgttcggt gtacattctg gtgttacttt
     1681 agcaattacc gttggtgttt tggttgaagt tcctgtaatg ctgtctcttg tacaaattat
     1741 gaaaaggaaa aaagcaaaat ttcaatttga tatttcagaa ccttcaaata aattttgatg
     1801 ctctacattc atataattat tttgttatgt aaacataaga gtggatatta gatgtctatc
     1861 acggttcctt tagcaccaat ttttcaacat ccaaatataa catctttgga atcaacaagt
     1921 gatttagaag aaggagattt tacaatatat gaaatgtcat cgtgtaagaa cgataaaagt
     1981 aaaagtaaag actctttaga aataattgac cattatacca tatccaaagt aagttaattt
     2041 tattaaaact tttttattat attgtttttt tattatcttt acaaaaaatt tttaaatatt
     2101 atactgaata aataataaat atcttaatgt aaatataatt tttcaaagaa gacaaaaaac
     2161 tctcaaatct atgctcagcc attgcctgtc tcatttatgg tattaactga aataaaactt
     2221 tatatttaat ctccttttat tttaaaatgt cgtattttat cagtccttga ataaaattat
     2281 ttttttctct atgtataaca atttaattag ttaatcaaaa ttaactacaa taattcattc
     2341 tgttcattca ttaacgttga ttcatagatt gatagtaaat gtaaagatcg ggtatatgaa
     2401 aaatgggtaa gaaaaaaaag gaaattaaaa taataaagaa taatagtgaa aattatactt
     2461 tcattaatga taatatttta gacaatataa ataatattaa tgcagaagtt gatgttattg
     2521 atggtaatga caattcaaat aaaaagcatg atactagaat tgacaaaaag atagattcaa
     2581 aacaaatgaa taacaaaggc agaaaaatta taggaaaaag tatgcaaggg cattcaccaa
     2641 tatatgaata gtttataatt taatatgaaa accaatattt attattaaag aaattttttc
     2701 atctttcata actctaatat tatatcggag atttcattac tgtttatttt attactgcat
     2761 atagcagcat aatcttttat ttcttaaaga gtttaactgt ttttatgcta taatttatta
     2821 ctacaaaaaa tataatccaa gcacatattg atcctaccat agacgcctta tatggttcaa
     2881 ctgatatctg aagcaactgg taatgaatca atatttttga tattgaaaat actatttctg
     2941 agatggagaa agcagttaac aattttttaa tatcttgttt gattaaagaa taattctttt
     3001 tattggttaa attgtctaaa tatttatttt tattatcaat ataatataac atagcaaata
     3061 atggaatata aactccatac tcaattgtca atgtaataaa tgaatttctg aaattattta
     3121 gatcatattc tgaatataat tgtgtaaata tggctccagc aaaaaatgct actattcctg
     3181 aaataattaa attcctatta aagagaatat aatttttata tttactaaag aaaataaata
     3241 aactcattat tattaaatat ttatgctttg ttgcgtaact catctagata atcaaatcta
     3301 tcctactgag attgataatt atgtaatagt tagactctga aacaagttat acaacgatac
     3361 ttttagtatc atttctttta tcatgttctc aaatcttata gcagtaacat attctctacc
     3421 aaacattctc ttcatgcagg agaagatagt ttctgcaatc catctctgtc catagcctac
     3481 actatctttc catttaacaa gatcagtttt ctgtatcttt accgtcttgt ttctctgata
     3541 gtgattggtc tttctaaacc tggaattctt tcttaccttt attactggtt tgattccttt
     3601 aaatgacaga tgctgaaaat tattgttatt atcataggca ccatctgcaa ttactgtgtt
     3661 tact
//
LOCUS       DATIAS010000009         3311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_138204, whole genome shotgun sequence.
ACCESSION   DATIAS010000009 DATIAS010000000
VERSION     DATIAS010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138204"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..334)
                     /locus_tag="VLA74_00175"
     CDS             complement(<1..334)
                     /locus_tag="VLA74_00175"
                     /inference="COORDINATES: protein motif:HMM:NF012274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde 3-phosphate dehydrogenase
                     NAD-binding domain-containing protein"
                     /protein_id="HSF49150.1"
                     /translation="MLKLNLAINGFGRIGRSFLKSSLLDKEFNDIIEIKAINDLANLK
                     ELSHLFKYDSTFGKFEGDIEIDETNKILIINKDKRINIISESDPSKLPWKELNIFFVL
                     ESSGKFNDK"
     gene            423..893
                     /locus_tag="VLA74_00180"
     CDS             423..893
                     /locus_tag="VLA74_00180"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF49151.1"
                     /translation="MNENKKFSKILVPIDGSEHSFHASQVALNIAEKFNAKVICLYVI
                     VSPSPQEYVNLTGLVTPKQIERIIDSAKEESKDWFERIKNSAKEDKMQIEITTEVILT
                     GLAAYGEIIQFAEKEKIDLIVIGTRGRTGFKKVLLGSIASGVVTYAHCPVMVVK"
     gene            1564..2019
                     /locus_tag="VLA74_00185"
     CDS             1564..2019
                     /locus_tag="VLA74_00185"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF49152.1"
                     /translation="MNKFTKILAPIDGSIPSMDAANYALSLAKKFSSELYIVSVVPSK
                     VKYGDSSGFFGMVPPKYFDNYKKEAEIWFDEVKKRLEDSEIKNIKINTEVITSPLSIS
                     GTILEYAENLNIDLIVMGTKGRTGFKKLLVGSTAQEIVTYAHCPVLVVR"
     gene            2234..3076
                     /locus_tag="VLA74_00190"
     CDS             2234..3076
                     /locus_tag="VLA74_00190"
                     /inference="COORDINATES: protein motif:HMM:NF021287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HSF49153.1"
                     /translation="MDEKEEVIAEMRHDVNLTSNDGKTLVYSMPEFKNIVLKDPVLIA
                     GFPGPGLVGSISVNYLIEKLQMKQIGCVESEFIIPGVIYYDGRLRHPFRLYSNQEGSL
                     CVLVCEAPILIRGISSVLNLVMKWCNNNNVQEVLVLGGFSRPGLDNSKREPYIFSSIN
                     EDSVQKTSFDRKIITTYLEPTTFIGGIPGGLLSSSLANNIPCTALFIPSRDDLPDAEG
                     AAIIIDEINKITKDEKLKVDTSQLRQEGENLKKRMLEFIESLRKEVSRVQKASGETEP
                     IIYG"
BASE COUNT         1224 a          457 c          543 g         1087 t
ORIGIN      
        1 ctttgtcgtt aaactttcct gatgattcca atacaaaaaa tatgtttaat tccttccatg
       61 gaagtttaga gggatcgctt tcagaaatga tatttatcct tttatcttta tttattatca
      121 atatcttatt agtttcgtct atttcaatat ctccttcaaa ttttccaaat gtagaatcat
      181 acttgaagag atgagatagt tcctttaagt ttgcaagatc gttaatcgcc tttatttcaa
      241 tgatatcatt aaattctttg tcaagaagag atgattttag aaagctacgt cctattctcc
      301 caaaaccatt gatagctagg tttaacttta acatattacc gataccattg ttctttctat
      361 taatgtattt tctaatacaa tcaataaata taatttattt actagataat cacaagagca
      421 ttatgaatga aaataaaaaa ttttcaaaaa ttttagttcc cattgatggt tctgaacatt
      481 catttcacgc atctcaagta gcccttaaca tagcagaaaa atttaatgca aaagtcattt
      541 gtttatatgt tattgtatcc ccatcgccac aagaatatgt taacttgact ggacttgtta
      601 cgccaaaaca gatcgaaagg ataattgata gcgcaaagga agaatccaag gactggtttg
      661 aaaggatcaa gaattcggca aaggaagaca agatgcagat tgaaataaca acagaagtta
      721 ttttgaccgg tttggctgca tatggtgaaa taatccaatt tgctgaaaag gaaaaaatag
      781 atttgatagt tattggcaca agagggagaa ctggatttaa aaaggtactc ttgggtagta
      841 ttgcatcagg agtagtaact tatgctcatt gccccgttat ggtggtaaaa taaacaatat
      901 tggcagttca aaaaaaattc atataaatga atttaatgaa ctcaaataaa aaattctatt
      961 ttgtttatta tgttgattaa atgaacaacg catcgaacca ttacaaatcg taatgctatg
     1021 tagggtaaaa aatatcaaaa atgtaatttc ttcaaaatta aaaacatttt ttttggaatt
     1081 gtcggattgt gtcttatatc tattttcgac atgatttgaa catagaatat tctatctata
     1141 tcctcgttcc caccttcaga cccagatatc acattacctt ggattaatat tgtgctaatt
     1201 tttttggtga tttatttggt tgatgtcgat aaagggtcca agattgtgtg tttggaaaca
     1261 tatttaacat aaatattttt gttctatatg agaaatatca aaaaaaggcg aaagattttt
     1321 tttccctaca aataacactt ctaaattcag catcagtttc cattgcagat aatggctttt
     1381 acttcctttc aaatgtagaa taagaagtaa ataatcattc tataaggatt accagagata
     1441 ttttttgatt atttgtgtat taataatggt aagtatttca atttaattct taaacttaaa
     1501 gtaaaatgta aaagataata ataaatgtaa aagataataa tgataggtgt actaatcaaa
     1561 tatatgaata aattcacaaa gatactagcg ccaattgatg ggtcaatacc ttctatggat
     1621 gctgcaaatt atgccctatc actcgcaaaa aaattttcct ccgaattata tatcgtatca
     1681 gtagtaccgt ctaaggtaaa atatggagat tcttctggtt ttttcggtat ggttcctcct
     1741 aaatactttg ataattataa aaaggaagct gaaatatggt ttgatgaagt aaaaaaacga
     1801 ttagaagata gtgaaattaa aaatataaag ataaatacag aagtaataac aagtccactt
     1861 tccatttctg gcactatttt ggaatatgcc gaaaatttga acatagatct tatcgttatg
     1921 ggaaccaaag gtagaacagg attcaaaaaa ttattagtag gaagtaccgc acaagaaata
     1981 gtaacttatg cacattgccc agtattagta gttagataaa ccctttttaa ttattttatt
     2041 aatagattca aaacgaacac aatattaaca aaatgtaatt atcagttctt ttgaagtatt
     2101 tcatataaat taaaagtgac aatctctacc atagtaggta gggtatccac taatacattc
     2161 cattatagaa ctatcaagaa agagatggcc gattaaataa tcattatatg tgacaaagtt
     2221 aacaattatg taaatggacg agaaagaaga agtaatagct gagatgagac atgatgtaaa
     2281 tcttacatca aatgatggta aaactcttgt atattctatg cctgaattta aaaacattgt
     2341 attgaaagat cctgttttga ttgcaggatt tcctggtcct ggactggtgg gttctatatc
     2401 tgtaaattac ctcatagaaa aattgcagat gaaacagatt ggatgtgtag aatctgagtt
     2461 tatcattcct ggagttattt attatgatgg aagattgaga cacccattta gactctattc
     2521 aaatcaagaa ggctccttat gtgtactagt atgtgaagca ccaattttga taagaggaat
     2581 aagttccgtc ttaaatctcg taatgaaatg gtgtaataat aataacgtac aggaagttct
     2641 ggtgctaggg ggattttcta gacctggtct ggataattca aagagagaac cctatatatt
     2701 ttcaagtata aacgaagata gcgtacaaaa aacaagtttt gatagaaaaa taatcacgac
     2761 ttatctagaa cccacgactt ttatcggagg aatacctggg ggtttattat catcatctct
     2821 tgcaaacaac atcccatgta ctgcattatt cattccctca cgagatgacc tcccagacgc
     2881 ggaaggtgct gccatcataa tagatgaaat aaataaaata actaaggatg aaaaactaaa
     2941 agtggataca tctcaattga gacaagaagg agaaaatttg aaaaaaagaa tgttagaatt
     3001 tatagaatct ctccgtaaag aagtttctcg agtacagaaa gcatcggggg agacagagcc
     3061 aattatttat ggataagcag aaaaaaatat tataatattt tctagcgata tccagtaggt
     3121 tgtgttaatt tacagactgg atgattattc aaaagatgaa acaggatatt attagttata
     3181 aatcgattaa attatttttt aaagtaaaaa ttgactcaaa atggatacac attatatgat
     3241 taatcaaata atttgtatta ttttttgaga gtatataagg aaatgaaatt accctatgta
     3301 agttaaattg a
//
LOCUS       DATIAS010000010         2069 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1364715, whole genome shotgun sequence.
ACCESSION   DATIAS010000010 DATIAS010000000
VERSION     DATIAS010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1364715"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VLA74_00195"
     CDS             complement(<1..220)
                     /locus_tag="VLA74_00195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49154.1"
                     /translation="MNLSINVLEKTDQKIILKFNNIPRQYLNAIRRIAISEVPTLAID
                     DVVILENSSVMHDEAIAHRLGLIPLRTEL"
     gene            complement(395..586)
                     /locus_tag="VLA74_00200"
     CDS             complement(395..586)
                     /locus_tag="VLA74_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49155.1"
                     /translation="MPNDTKCSICNNQISVFRYKAMGQWNIQGYLCGDCYSKKLIEHY
                     IPEYIPTKEDSSSYNKNPK"
     gene            827..1321
                     /locus_tag="VLA74_00205"
     CDS             827..1321
                     /locus_tag="VLA74_00205"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF49156.1"
                     /translation="MGLNEKIIFLGILGMGAAVGVISYFAFSDLSPSPGDTKSIYRQE
                     LPPPTAQATAKTEKVDPSTVKADVTLTILEGAATQGNPDYDPDELSVKKGNIIKVENV
                     DLVPHTVTNGAGPNDPNSAKIFDTSLIMGGESGILQTEEIDAGEHIYYCTVHPYMTGT
                     LKIG"
     gene            1464..>2069
                     /gene="sufC"
                     /locus_tag="VLA74_00210"
     CDS             1464..>2069
                     /gene="sufC"
                     /locus_tag="VLA74_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HSF49157.1"
                     /translation="MVFLEVKDLNVSIDGKKILNGLNLEIDKNEVHAIMGVNGSGKST
                     FANVLLGHPKYSITSGDIIVKGKSILKLSTDERAKQGIFLGFQYPIEISGVGYSHFLR
                     NAYNTLNKSLLEDQKDREVFLTVKEFHEYVKKNLNNVGLDPSFLGRYLNEGFSGGEKK
                     RSEVMQMLVLKPNIAILDEPDSGLDIDSVKAVADAINTLIAT"
BASE COUNT          751 a          262 c          324 g          732 t
ORIGIN      
        1 ttaattcggt tcttaaagga attaatccca atctatgagc tattgcctca tcatgcataa
       61 ccgatgaatt ctctagaata actacatcat caattgctaa tgttggaact tcgcttattg
      121 cgatccttct gatagcattc aaatattgtc ttgggatatt attaaatttt agtattattt
      181 tttgatctgt tttttctaaa acatttatag ataagttcaa tagtatttca agatttttga
      241 ccaatgcact cttaaaaatc taccgaccgt aacaatatga cctggtgatt gatattaata
      301 gtttaagtaa tatattaatt acattgaagg atcataattg caaattctga aatataattc
      361 catacgatgt ttcaatatta gtgaagtata tttattattt aggattttta ttatagctgc
      421 tactatcttc ttttgtagga atatattcag gaatatagtg ttctattagc ttttttgaat
      481 aacaatcacc acataagtat ccttggatat tccattgccc cattgcttta tatctaaaaa
      541 cagaaatttg attgttgcaa atagaacatt ttgtatcatt aggcatttct ttaattattt
      601 ttattattat aaatacgata ataataattg tgttaattaa ttaaagtata ttattaatga
      661 aaaacttgta aaatacctga aatttatcct acacatcatg tattaatttt caattaatag
      721 aagatatgat aatcttaatt tgtataaaag taatgatcac acacttgatt atcatttatt
      781 tttaaaaaaa ttaattaaga tctaattcga atccataatc agttaaatgg gacttaatga
      841 aaagattatt ttcttaggaa tattaggaat gggtgcggcc gtaggagtaa tttcatattt
      901 tgcattttct gatctttccc cttcaccagg agatacaaaa tcaatctata gacaggagct
      961 acctccaccg acagcacaag ctactgcaaa gacagaaaag gtagaccctt caactgttaa
     1021 agcggatgta acactaacga ttcttgaagg agctgcaact caaggtaatc cagactatga
     1081 tccagatgaa ctttcagtta aaaaaggcaa tataataaaa gttgaaaatg ttgatttggt
     1141 tcctcataca gttacaaatg gtgcaggccc taatgatcca aattcagcaa aaatatttga
     1201 tactagtttg attatgggag gagaatcggg aattttacaa acagaagaaa ttgatgcagg
     1261 tgagcatata tactattgta cagttcatcc ctacatgact ggaacgttaa agattggata
     1321 aatgataaaa agaccagtta ctttattttt ttatattata ggatatttgt agattttgaa
     1381 gattagatac attttttagt atttgatgta attttcaaat aatgatatgc ttatatatgt
     1441 aattaagaaa attatattat atcatggttt ttttagaggt taaagatctt aatgtaagta
     1501 tcgatggaaa aaagatacta aatggtttaa atttagaaat tgataaaaat gaagtacatg
     1561 ctataatggg tgtaaacgga tctggaaaaa gtacctttgc aaatgtactt ttaggtcatc
     1621 caaaatattc tattacttct ggagatatta ttgttaaagg aaaaagcatt ttgaaattat
     1681 ctaccgacga aagggcaaag caaggaatat ttttgggatt tcaatatcct attgaaattt
     1741 caggtgtagg ttatagtcat tttttaagaa atgcttataa cactttaaac aaatcattat
     1801 tggaagatca aaaggataga gaagtttttc ttactgttaa agaatttcat gaatatgtta
     1861 aaaaaaatct taataatgtt ggcttagatc cttcttttct tggaagatat ctaaatgaag
     1921 gattttcagg aggagaaaag aaaagatcag aagttatgca aatgttggta ttaaagccaa
     1981 atatagctat attagacgaa ccagactctg gtttagatat tgattcagta aaagcagttg
     2041 ccgatgcaat aaatacatta attgctaca
//
LOCUS       DATIAS010000011         2843 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1228693, whole genome shotgun sequence.
ACCESSION   DATIAS010000011 DATIAS010000000
VERSION     DATIAS010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1228693"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VLA74_00215"
     CDS             complement(<1..454)
                     /locus_tag="VLA74_00215"
                     /inference="COORDINATES: protein motif:HMM:NF014075.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-hydroxymethylpterin diphosphokinase MptE-like
                     protein"
                     /protein_id="HSF49158.1"
                     /translation="MGYSTEEDQKAAYLLSNLIKRKFLDPKVLDKKINGKRILVIGAG
                     PNLELYTSFIKKNKSYIKIVADGAVKFLIDNNIKPDIVVTDLDGDLRYLIKAEKLGAI
                     IVIHAHSDNIDLMEKYVRKFRRIIGTTQVMPVPHVFNYGGFTDGDRCVF"
     gene            638..1792
                     /locus_tag="VLA74_00220"
     CDS             638..1792
                     /locus_tag="VLA74_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase X catalytic domain-containing protein"
                     /protein_id="HSF49159.1"
                     /translation="MELTRQEEMALKGEYGEGLGLSYKILVAIGNANNASKLIPIKWA
                     HISGVNFNTIGEAGVKFLSGLDKKNKVTVTTTLNPMGFDSRKDNNLSDYFKSNQMSII
                     NSYLSLGIKPSFTCIPYEIFDLPNKGEIVSFAESNAAVFVNSMLGIKTNKESALSSLA
                     SAITGKTPYSDLLIDELRKPKISIQPEINIETELDYGLLGYFAGKITNESCIGLETNF
                     KNLDIVKSKALSAGIGTSGRAGMFNNTNNDCERVSFGKTELDQVKDDLNTSEKGELIV
                     FGSPQLGIDELNLLVHLIEGKKFRKPCKIFCPRSVTEMECNSEIIKRLRNAGADIICD
                     SCTCLTPLITKNDYDSIVTNSIKCAYYMKHSNKIDVSLKDMETITKEYCE"
     gene            1801..2208
                     /locus_tag="VLA74_00225"
     CDS             1801..2208
                     /locus_tag="VLA74_00225"
                     /inference="COORDINATES: protein motif:HMM:NF014091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF126 domain-containing protein"
                     /protein_id="HSF49160.1"
                     /translation="MIKINCKKIVGGKADGLALLSHRPINMLSMLDTKSGRIKDEDHD
                     LFNQIVKDRILILPNCIGSSVGAYIFYSLKINGVSPKAIICTNRCDIITASGCAISNI
                     PLVDGTGSSFKSLDNNTKVTVDADKQIIIIHTI"
     gene            complement(2372..2596)
                     /locus_tag="VLA74_00230"
     CDS             complement(2372..2596)
                     /locus_tag="VLA74_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain-containing protein"
                     /protein_id="HSF49161.1"
                     /translation="MSIDVTVQVLKENIGKNIVIKLKGDKVVKGILEKFDQHMNLVLS
                     DATEYKAEEATKLGNLLLKGDNIIIISPQE"
BASE COUNT         1082 a          390 c          413 g          958 t
ORIGIN      
        1 ggaatacaca cctatcacca tcagtaaatc ctccataatt aaatacatgt ggaacaggca
       61 ttacttgggt tgttcctata attctcctaa atttacgtac atatttttcc attaaatcta
      121 tattatcact atgagcatga attactataa ttgctccaag tttttctgct tttattaaat
      181 aacgaagatc accatctaaa tctgtcacca ctatatcagg tttgatgtta ttatctatta
      241 aaaattttac tgctccatct gcaacaatct tgatgtatga tttatttttc ttgataaaag
      301 aagtataaag ctctaaattc ggtccagcac caataaccaa tattcgttta ccatttatct
      361 ttttatccaa aactttagga tcaagaaatt ttctttttat taaattagat aataaatacg
      421 cagctttttg atcttcttct gtactataac ccattttctg tcggataact tgataatacg
      481 ggaaccagat tacaaattgc acatatatta taattaataa cttattaata gactatatgt
      541 taaagcattt taaatgaaga ctatctatca tttacatttt taaataacca caagaacttt
      601 taaatgacaa tatatatttt attaatgaat ttaataaatg gaactaacta gacaagaaga
      661 gatggcttta aaaggagaat acggagaagg attagggcta tcttataaaa tacttgttgc
      721 aataggaaat gctaacaatg catcaaaact aattcctata aaatgggctc acatttcagg
      781 agttaatttt aatacgatag gagaagctgg agtgaaattt ctttcaggtt tagataaaaa
      841 aaataaagtt acagttacaa caactctaaa ccccatggga tttgactcta ggaaagacaa
      901 taacctttca gattatttta aatcaaatca aatgtcaatt ataaattctt atttatcttt
      961 aggtataaag ccttctttca catgtatacc ttatgaaatt ttcgatctgc caaataaagg
     1021 agaaatagtt agttttgcag aaagtaatgc tgcagtattt gtaaattcca tgttaggaat
     1081 taaaactaac aaagagagcg ctctaagctc attagcaagt gcaatcactg gtaagactcc
     1141 gtactcagat ttattaattg atgaacttag aaaaccaaaa attagtattc aaccagaaat
     1201 aaatatagaa acagaattag attatggact attaggttat tttgctggga aaataactaa
     1261 cgaaagttgt ataggattgg aaactaattt taaaaattta gatattgtaa agtcaaaagc
     1321 cctatcagca ggaattggaa catcaggtag ggctggaatg tttaataata caaataatga
     1381 ttgtgaaaga gtatcttttg gaaaaacaga gcttgatcaa gtaaaagacg atttaaatac
     1441 ttctgaaaag ggagaattaa tagtatttgg aagccctcaa ttaggtatag atgaattaaa
     1501 tttgcttgtc catttaatcg aaggaaaaaa atttagaaaa ccatgtaaaa tattttgtcc
     1561 tcgttctgta acagaaatgg aatgtaatag tgaaataata aaaagattaa gaaatgcagg
     1621 tgcagatatt atttgtgatt cctgtacatg cttaacaccg ctaataacaa aaaatgatta
     1681 cgattcaatt gtaactaata gtataaaatg tgcgtactat atgaaacatt caaacaaaat
     1741 agatgtctct ttgaaagata tggaaaccat aacaaaagaa tattgtgagt aatttcttta
     1801 atgataaaga taaattgtaa aaaaatagtt ggcggaaagg cagatggttt agcattatta
     1861 tcgcatagac caattaatat gctctcaatg ttagatacga aatctggaag gataaaagat
     1921 gaagatcatg atttatttaa tcaaatagtt aaagatagaa ttcttatttt acctaattgt
     1981 attggaagta gtgtaggagc ttatattttt tattcattaa aaatcaacgg tgtcagtcca
     2041 aaggcaatta tttgtactaa tagatgcgac attataactg catcaggttg tgcaatatca
     2101 aatatacctc ttgtagatgg aacaggctca agttttaaat cattagataa taataccaaa
     2161 gttacggttg atgcagataa acagataatt ataatacaca caatttaatt ttcggaatat
     2221 caatcagtac tactatcggt gcatggcaat cgatgggcga actgatcatg tataacatga
     2281 aatgaagacc aaagtccatg caccgataaa ataatagata gaaaaattaa tacttcatga
     2341 ttatcgcaag aaaaacaaaa aatattttgt attattcttg tggagagatt attattatat
     2401 tatctccttt aagaagtaga tttcctaatt tagtagcctc ttcagcctta tattctgtag
     2461 catcacttag gactagattc atatgttgat cgaatttttc taatatacct ttaactactt
     2521 tatcgccttt tagtttaatt actatgttct ttccaatatt ttcctttaat acttgtacag
     2581 ttacatcaat agacaatatg atatcatcat aaattacaat atataattta atagatctat
     2641 tttttattaa aaagtttcta tatgaaatag acaattataa aagatatgag aatataataa
     2701 ataagaatag ttcgacttta tccattaaca ttaacaataa gttatctaca taacattaac
     2761 atcatgaggt tgactttcaa tataaccagc tgtagtaatt cgtacaaatt cagcattttg
     2821 ttgcatttca ttaatggttt ttg
//
LOCUS       DATIAS010000012         3181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1501011, whole genome shotgun sequence.
ACCESSION   DATIAS010000012 DATIAS010000000
VERSION     DATIAS010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501011"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            573..1061
                     /locus_tag="VLA74_00235"
     CDS             573..1061
                     /locus_tag="VLA74_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49162.1"
                     /translation="MRYSIDLSKEKRTRILCVLYCYERNYYKYKRKISLQLEQIQKER
                     TDSAIWLEVQTLKDRMSGLYRALNDKIQHPHTKTSDLSNLVSTAESISINIMKLESAS
                     ITAIQQSNILESHVNTQLPSKSKYKELPKISYVDNNQIESKALEESNISENINNDITY
                     ND"
     gene            complement(1091..1996)
                     /locus_tag="VLA74_00240"
     CDS             complement(1091..1996)
                     /locus_tag="VLA74_00240"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSF49163.1"
                     /translation="MKYYLGCSGWSYDEWKGPFYNPKDLDNRYWLSYYSQIFDFVEID
                     STFYKIPSTFMVNNWNKRTSDSFRFAVKFPKVITHDKRLKDVGKDIEQFYDAMEPLYK
                     KILVFLIQLPPSLQISEGLDLIKSLQYILDPSFRYAIEVRHHSWFNELFYNYMKEKNY
                     CLVWSQQDILVTPPVLTTDFIYLRLIGDRSIDERDFGKIKKDRTKEMQLWTNILKDIQ
                     KNEKNVKTAIIAANNHYAGFGPKTAKLFEEMINLKNHIRSFPNVDYKIPFKDLSQTEK
                     EKQNFRIYKQLRSKTRQTDISDFFK"
     gene            2498..2671
                     /locus_tag="VLA74_00245"
     CDS             2498..2671
                     /locus_tag="VLA74_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49164.1"
                     /translation="MFVSHNIERYDDYGYFQRGDKVTACVENFDENNYRDCDTATVNK
                     FGIADFNLKAAPY"
     gene            complement(2695..2922)
                     /locus_tag="VLA74_00250"
     CDS             complement(2695..2922)
                     /locus_tag="VLA74_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49165.1"
                     /translation="MSNSFELLTGSITDIQKKYEILSDIVTEMGGRVHGSQSHIVTPN
                     NALQLIVYYEVPEGMRDEVKNKFENTTTKLS"
BASE COUNT         1112 a          442 c          456 g         1171 t
ORIGIN      
        1 gttatctaca acatcaaaat caagtaatac ttcacctctt tttactagag actcgttgta
       61 atttctccag ttcatcatat aatatgacta gaataggtta gctaaatgtg ttaggaagag
      121 gaaattacgc aacaaagtat agaaatgtgt tactttattt tgttttattt aaaagataat
      181 tttatcacct aaattttaat aagtattttt acatcccttt gattgaaatt tagcgtatac
      241 attattattc ataataaaaa agattaattt tctggatttg aaatatagac attaagtata
      301 agaaattgta cgagttatta ttttcagata aaaccacgtt tcaagagaat aaatgtaaac
      361 agaataattg actaatgctg atagaatgac tatcaaatca aacatactaa ctgatagaca
      421 aaaaaaaacc aacaatgata aattctgaat ttgtatttgt cttcatcata tttatttatg
      481 tgaatgtgtc ataatatgtc tggtttcagt gagtgataaa ataaagtgat cagcaaacaa
      541 cagtatgagg cacacttgca gatggcgaat gcatgagata cagtatagac ttgtcaaagg
      601 agaaaaggac aaggatatta tgcgtgctgt attgttatga gagaaattat tacaaataca
      661 agagaaagat atcattacag ttagaacaaa tacagaaaga acgaactgac agtgcaatat
      721 ggttagaagt ccaaactctt aaagatcgta tgtcaggttt atatcgtgca ttaaatgata
      781 aaatccagca tccacatact aaaactagtg atttgtctaa tttagtatct acagcagaat
      841 caatatcaat aaatattatg aaacttgaat cagcaagtat taccgctata caacaatcca
      901 acatattaga aagtcacgta aatacacaac taccttcaaa atccaaatac aaagaacttc
      961 caaaaataag ttatgttgat aataatcaaa tagaatcaaa ggctttagaa gaaagtaata
     1021 ttagtgaaaa tattaataac gatattactt acaacgatta atttaatata ctatctaaat
     1081 tgtagttata tcatttaaag aaatcagaaa tatcagtttg tctagtcttt gaacgtaatt
     1141 gtttatatat tctaaaattt tgtttttctt tttcagtttg acttaaatcc ttgaaaggta
     1201 ttttgtaatc tacattagga aatgatctta tatgattttt caaatttatc atttcttcaa
     1261 ataacttcgc agtctttggc ccaaatcctg cataatgatt gtttgctgct ataatggcag
     1321 ttttaacatt tttttcattt ttttggatat ctttcagtat atttgtccac aattgcattt
     1381 ctttggttct atcttttttt atttttccaa agtctctttc atcaatactt ctatcaccta
     1441 ttagtctcaa atatataaaa tctgtagtta agactggcgg agtaactaaa atatcttgtt
     1501 gactccatac aagacaataa ttcttttctt tcatataatt ataaaaaagt tcattgaacc
     1561 aactgtgatg tcttacttct atcgcatatc taaaagaagg atccaatatg tattgtaaac
     1621 tctttatcaa atcaagacct tctgaaattt gtagagatgg aggtaactgt atcaaaaaaa
     1681 caaggatctt tttatataat ggttccatag catcgtaaaa ctgctctatg tcttttccta
     1741 catcttttaa ccgcttatca tgggtaataa cttttggaaa ttttacagca aacctgaaac
     1801 tatcggaggt tcttttattc cagttgttaa ccatgaatgt agagggtatt ttataaaaag
     1861 tagaatctat ttcaacaaaa tcaaatattt gagaataata ggaaagccaa tatctattat
     1921 ctagatcttt aggattgtag aatggccctt tccattcatc ataactccat cccgaacatc
     1981 ctagataata tttcattaca ttctttattt aacacaagaa agcaaaaata gtttttttaa
     2041 aatgtaatag tttctttttc tatgtttttt tcttcatcta tttacttgat ggcattttat
     2101 aatttactat tttttacgtt tggctaattt ttgtctaagg gcttgttcaa gaaagtcggt
     2161 agcagtaata cctaaatcta tcgctgcttt ctttacttct ttacatatat tttagcaaaa
     2221 aaatactctg aaattattag agaattttct taccttaacc ttaaataatt ctataaattt
     2281 attatagatg aatgttacag ttatttctat ctatgggatt aataataggc gtaattttct
     2341 tgataaacat taattctatt gatgcaacga gcaatagtat atacgatagg gggtactcta
     2401 cctttttgcc tttcacttag aaaataaagg aattggtgat gatgttgcga ttacagtaga
     2461 aggtgaaaat ggacaatcgc tacactggag gactacattg tttgtaagtc ataatataga
     2521 aagatatgat gattatggtt attttcaacg aggcgataaa gttactgcat gcgtagaaaa
     2581 ttttgatgaa aataattatc gcgattgtga taccgctact gtaaacaaat ttggtattgc
     2641 tgatttcaat ttaaaagcag caccatatta atattaaatc agtgttgaat ctttctaaga
     2701 taatttagta gtagtgtttt caaacttatt ttttacttca tctctcatac cttctggaac
     2761 ttcataatag acaattaatt gtaaagcatt atttggagta acaatgtgag attgtgagcc
     2821 atgtacccta cctcccattt cagttactat atcagataat atctcgtatt tcttttgaat
     2881 atctgttatt gaaccagtaa gcaactcgaa ggaattagac atttttagtt taggttgttg
     2941 acttccataa tatgattttt tagagtaata ataatttggt ttgatattac ttgcagtaat
     3001 tgttggggtt gaattagtat tacttacttg ttttttatta ggtaatacct aaggttttgg
     3061 aacagtttta acgagaatat ttgtcaacat atgaaatata tttttgtatc tattgttgaa
     3121 tctgaattct atctctttta gagatacaga tgaaaatact gttttggtac tcctctataa
     3181 t
//
LOCUS       DATIAS010000013         4011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1774007, whole genome shotgun sequence.
ACCESSION   DATIAS010000013 DATIAS010000000
VERSION     DATIAS010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774007"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1983
                     /locus_tag="VLA74_00255"
     CDS             <1..1983
                     /locus_tag="VLA74_00255"
                     /inference="COORDINATES: protein motif:HMM:NF044439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSF49166.1"
                     /translation="YNDFLALKNVYSKGNTDNSLNSDQIIDNNNNKNRIKNGKKELVI
                     KIATGDYDSQGKDLLDADIVILTNEKLDALIRNDTELLSNVGLFVIDEIHLIGDKDRG
                     PTLEIMLTKIKKFYHEAQILALSATVSNSKEIAEWLDCTLLESNWRPTTLIEGIYDQG
                     IIRTNNNKKSKINHNSSISSAPVDIAVDSVENGGQVIIFADTRKRAASLAAKSAEGIF
                     SLLDKKQKEKAANLASKLAKISDDTELTKNLITLISKGVGFHHAGLGHVAREKIEEYF
                     KNGTIKLLASTPTLAAGVNLPARRVILSSILRYDYDYGSNVPISILEYKQLCGRAGRP
                     QYDTFGEAIIVSESGMNSEDLYDHYILGTPEPIKSKLFNEKSLRFHILSTISTIPGIK
                     KTELYELFSNTLFAQNTKKSNIIFKLDSVLEYLEEYEFIKCKNDRYIATAFGKQTSIL
                     YIDPLSAMEFKNTLNSISEIKKSLDSGQYENITICFLHLISECSDFYPKLALRKKDMD
                     IFYTTIRKYSNDLIYDLNENNCSRSFLGLCEWINETSDRSLSDKLAIDPGDMHRISES
                     GEWLIHSLYEFAKLFKREDLLPIISDLRTRIKYGIKKELLSLVKIEGIGRIRARALHD
                     SGIVNLTILKSTPESTLSKISKIGPTVAKKIKKQFN"
     gene            2291..3229
                     /locus_tag="VLA74_00260"
     CDS             2291..3229
                     /locus_tag="VLA74_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine-1-phosphate transferase"
                     /protein_id="HSF49167.1"
                     /translation="MPRAIKSLTYKGKVVQDYHKPQKPNIPRPAGPILIMGIIIPMII
                     IYLFTFSMEILAILFTTIIAFCVGYIDDKKVMPGWFKPIALIVSALPIIILGVYDTNL
                     NLIFGNAFIPILYIPLILIAIPVVGNTINSIDVLNGVVSGFMLITCIPLIISVYIFGN
                     IEVFVSAISLFFINLAFYKYHKFPSKIFPGDSGTLMLGAMYGAIAIIGKSELIAIIAL
                     LPAIFNSFLFLSSVKRVVEHREITTRPTFLTDDFKLDASKDKKAPITLLRLILVDGPL
                     TEKELATKIFKLGIFSSCLALISIVIQYYFVIGIGR"
BASE COUNT         1512 a          567 c          574 g         1358 t
ORIGIN      
        1 tataatgatt ttttagcttt aaaaaatgtt tattctaagg ggaatacaga taattcttta
       61 aattcggatc aaattattga taataataat aataaaaaca gaataaaaaa tggaaaaaaa
      121 gaactcgtaa taaagatagc gactggagat tatgactcac agggaaaaga tctattggat
      181 gcagatattg ttatattaac taatgaaaaa cttgatgcac taatacgaaa cgatactgag
      241 ctattatcta atgtaggact ttttgttata gatgaaatac acttaatagg agataaagat
      301 cgaggtccaa ctcttgagat aatgttgaca aagataaaaa agttctatca tgaagcacaa
      361 atactagcac tcagtgcaac tgtatcaaat tcaaaagaga ttgctgaatg gttggactgt
      421 acattactag aaagcaattg gagaccaaca actctaatag aggggatata tgatcagggg
      481 ataattcgta caaataataa caaaaaatct aaaataaatc ataattcatc aatatcatct
      541 gccccggtag atatagcagt ggattctgta gaaaatggag gacaagtaat tatttttgca
      601 gatacccgaa aaagagcagc ttcactagca gctaaatcag cagaaggaat ttttagttta
      661 ctcgataaaa aacaaaagga aaaagctgca aaccttgcat ccaaattagc taaaatatcc
      721 gacgatacag aacttacaaa aaaccttata accttaattt caaaaggtgt aggttttcat
      781 catgcaggat tgggacatgt agcacgggaa aaaattgaag aatattttaa aaacggaaca
      841 attaagctat tagcttctac tccgacattg gccgcaggag taaatcttcc tgcaagaaga
      901 gtaatattgt ctagtatttt gagatatgat tatgattatg gttcaaatgt tccgataagt
      961 attcttgaat ataaacaatt atgtggacga gctggtaggc cacaatatga cacatttgga
     1021 gaagcgataa ttgtatcaga atctggaatg aattcagaag atctttatga tcattatatt
     1081 cttggaaccc ctgaacctat taaatctaaa ttatttaatg aaaaatcatt acgtttccat
     1141 attcttagta ctatatcaac tattccaggg ataaaaaaga cagaactcta tgaactgttc
     1201 tccaatactc tatttgccca aaataccaag aaatctaaca ttatatttaa acttgatagt
     1261 gtattagaat accttgaaga gtatgaattt ataaaatgta aaaatgatag gtatattgca
     1321 acagcattcg gaaaacaaac ttctatctta tatatcgatc ccctttcagc tatggaattt
     1381 aaaaatacac ttaattcaat ttctgagatt aaaaaatctc tggattcagg tcaatatgag
     1441 aatattacta tttgcttttt acatttgatt tccgagtgtt cagattttta tccaaaacta
     1501 gcactaagaa aaaaagacat ggatattttt tatacgacta tcagaaaata ttctaatgat
     1561 ctaatatatg atctaaatga aaataattgt tctcgcagct ttcttggatt gtgcgaatgg
     1621 ataaatgaaa ctagtgatag atccttgagt gataaattag caatagatcc tggtgatatg
     1681 cacagaattt ctgaatctgg tgaatggtta atacattctt tatatgaatt tgcaaaatta
     1741 ttcaagagag aagatctact tccaataatt tctgatctta gaactcgaat aaaatacggt
     1801 ataaagaagg aattactatc gttggtaaag atagaaggta taggaagaat aagagcacgt
     1861 gcacttcatg attctggaat agtcaatcta acaatactta aatcaacacc agaatccact
     1921 ttatctaaaa tatccaaaat tggaccaaca gttgccaaga aaatcaaaaa acaattcaat
     1981 taaacataat tacaatatta ttattcctca ataatacaat ctcataaaac ttaatagtaa
     2041 aacaaaaata gaaatcattc tatcattaaa taaagaaact gatatgaaaa tcaaaaatat
     2101 tatttttaac attgataaca tttcttcata taaaaaagaa caatctgaaa aaaaatacaa
     2161 aaatataaca tcaaaaagag ttatctagtg aatataaaaa atgataattt tgaatgatag
     2221 ttctgtactt acgtttatta tttatacaat aatttcttct gtatgctctt ttttcatcgt
     2281 gtattttttt atgccccgtg caattaaatc tcttacctac aaaggaaaag tagtacaaga
     2341 ctatcataaa ccacaaaaac caaatattcc aagacctgcc ggtccaatct taattatggg
     2401 gataataata cctatgataa tcatttatct atttaccttt agtatggaaa ttttggcaat
     2461 cttgtttaca actataattg cattttgtgt tggttatatt gatgataaaa aagttatgcc
     2521 aggatggttc aaaccaattg ctttaattgt ttcagcatta ccaattatta ttttgggtgt
     2581 atatgataca aacctcaatc ttatttttgg taacgcattt atcccaattt tatatatccc
     2641 attaattcta attgcaattc ccgtggtagg aaatacaatt aattccattg atgttttaaa
     2701 tggtgttgta agtggattca tgttaataac gtgtatccca ttgataatca gtgtctacat
     2761 atttggaaat attgaagtat ttgtatcagc catctctctt ttttttatta atttagcttt
     2821 ctataaatat cataaatttc caagtaagat ctttccaggc gattcaggta ccctgatgct
     2881 tggagcaatg tatggtgcta tagcaataat aggaaaatca gagctaattg caattattgc
     2941 attacttcct gctatcttta attcattttt atttctctca agtgttaaaa gagttgttga
     3001 acatagagag atcactacaa gacctacatt tttaacagat gattttaaac tggatgcatc
     3061 aaaagataaa aaagctccaa ttacactttt aagacttatt cttgtagatg gtccactaac
     3121 agaaaaagaa ttagccacca agattttcaa actaggaatt ttttcatcgt gtttagcatt
     3181 aatttcaata gtaatacaat attattttgt tataggaata ggtagataat cgtatggttt
     3241 caaatcttat atcgttgatt gcattatttt ggtgtaccat tttagcaata tcttttttct
     3301 tggtgatttt tgtcgctcct atggaaatta taatttttaa tactagaact gatctttata
     3361 ttacatcaat agttcaagct ctaatagcta ttttatttgt gttattacta atagttattc
     3421 tcaattatct caagagagtg tatattcgaa gaaaattgaa attatgagaa aataaaatca
     3481 tatccctgta tcaacttaat tctttaacat attctatata ttgattgttt tatttttatg
     3541 tatacatatt aattgaatca tattctaagc cggaaaatga atatataaaa aatagcgata
     3601 atttcaaacc tacccttgcg agttacaata attgtttcca cttttttttg ttgcattagt
     3661 ttaactgctg atgcaactga taaattttca ttcaataaaa caattgttta tgcatataag
     3721 aaaatacaga acgttctaat ggttcaatca ttcattatcc tcaattcgaa atattctact
     3781 gatttgtgta gtaatcctat caataaaact agctaaaatt ttaccaatat taataatcag
     3841 ataatttgta aatgcacaat acaagtaatc cactaatact ctatgatact attagcagtc
     3901 atatataaat gatagaatgg taataggatg attatatata taaaccgata tctttattca
     3961 ggtttagtta tcaaattaat atgatcagtt aatgttaaaa aatgatgatg a
//
LOCUS       DATIAS010000014         4973 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_683975, whole genome shotgun sequence.
ACCESSION   DATIAS010000014 DATIAS010000000
VERSION     DATIAS010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4973
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_683975"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(445..861)
                     /locus_tag="VLA74_00265"
     CDS             complement(445..861)
                     /locus_tag="VLA74_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49168.1"
                     /translation="MSNKKIVFASMLAAILATGLLALNPSMKGIAQAQMYDSQYGYDN
                     SYNNYYPDPKSSHVEIQKISCVDSNINVNGIDVTQIPSDNLGPSAANEGGAADAANTQ
                     NGNGLGDRINFDKNLVNICINLNFNNQERIPFDTIS"
     gene            896..1018
                     /locus_tag="VLA74_00270"
     CDS             896..1018
                     /locus_tag="VLA74_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49169.1"
                     /translation="MEGTLSNLVIFEVSEIIIVKRIAIDLQVENEIVTVAISLE"
     gene            1233..2195
                     /locus_tag="VLA74_00275"
     CDS             1233..2195
                     /locus_tag="VLA74_00275"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF49170.1"
                     /translation="MNSKNDISGIHHITAICSDPQKNIDFYTKLLGLRLVKLTVNFDD
                     PSTYHLYYGDEIGHPGTILTFFPWSKAPKGYRGTGQAVTTSFLVPQNSIEYWRNRLKN
                     NDVCFEEPTKRFEDEQVIRLYDPDGLELELVAHSSADKNDERFWKEGPISYENGIRGF
                     YSVSLSEEGYERTSEILCELGYKMIANEGNRFRYQLENAQGVTGSKILDVLCLPYTPN
                     GIIGIGTVHHIAFRTPSDEKQKSIRDSIIKIRLNPTPVLDRTYFHSVYFREPGGVLFE
                     VATDPPGFTVDQKIQDLGKRLMLPRWLEPVREKLERILPKIDLF"
     gene            2232..2897
                     /locus_tag="VLA74_00280"
     CDS             2232..2897
                     /locus_tag="VLA74_00280"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49171.1"
                     /translation="MIRSNDFGFTHIYSSSNDLREDDSNKKKLTFVLLHGTGGNEEDL
                     MFLGKEIEPNASLLSPRGKVLENGMPRFFRRLSEGVFDLEDLKFRTYELADFIQNCSS
                     YYEFNLQNTVAIGFSNGANIAASMVLLRPEVLHGAILFRAMVPLIPVYTPDLSNKKIL
                     LSAGLNDPIVPRIETENLYKIFEKNNAIITLKWQSSGHNLIQEDILIARNWISNNFSA
                     EKQ"
     gene            3185..4363
                     /locus_tag="VLA74_00285"
     CDS             3185..4363
                     /locus_tag="VLA74_00285"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSF49172.1"
                     /translation="MYNHTHERDIENVLILQGGGSLGAFACGVCKAFAKKDIKFDIVA
                     GTSIGAINGAITTGSKNDNPEKDLEDFWMELAQSSYNIIPDVFSFDYDDQNHQFNIKK
                     SSAASLNAALFGVPKFFVPRWMNWNMYMCNPSKDFPLQSSNWTYIYDNTLLEKTLDKY
                     IDFRKLSPDTKQSNKNGQNGNNNNTRLIITAVDVLSAEPIIFDSYKMQIQMKHLLATI
                     GYPQYGFPWIEVNDRLYAWDGSLLSNTPIREVMTASPSKDKNIFVVENFPKKIGKLPS
                     DMSEVQSRAKDIMFTDKDQSLEKMSRLITRHINLIETLYDVFKEHDSSKIDKDIINYV
                     EKEHKILVEKYGAKILNIKRISRENNKRPYPMQNADFSVNTIKELIVEGENKALESLK
                     "
BASE COUNT         1793 a          756 c          832 g         1592 t
ORIGIN      
        1 aaagtcacaa aataaaatat caaataaaat aacttgttga cgtgtacaga ccgtttaatg
       61 aaatattttt tgaatttaat taaaaataaa tggtatcagc agatatcaat tgataataaa
      121 agatagataa gtgaaaatac aataccatac catttattaa ccactttttt aattgaatct
      181 cggactggaa gttccaggtt tgaataaatt tgaaaaactt aaattttcta tcgaaactga
      241 agaaattctg aaattaattt taacatataa aaagatcatt ttattcttca aaaattaatt
      301 atacgagggt gaacccgaga aaattacggg ccgtcgggag ttgaataggc acggcttccg
      361 tgttcactaa cagaatatcg ctggagtaat agattaatta atttggataa ttaaaaaaga
      421 aaagaaagat agttaaattt agtcctatga tatggtatca aaaggtattc tttcttggtt
      481 gttaaagttg aggttgatac atatatttac caagttctta tcaaagttta ttcggtcacc
      541 aagtccgtta ccattttgtg tatttgctgc gtctgctgct cctccttcat ttgcggctga
      601 cgggccaaga ttgtcactag gtatctgggt aacatctata ccgtttacat ttatgttact
      661 atctacacat gatattttct gtatttctac atgagaactc tttggatctg gataataatt
      721 gttataacta ttatcatatc cgtattggct gtcgtacatt tgtgcttgtg caattccttt
      781 cattgatggg tttagagcca gtagacctgt agcaagtatt gctgccaaca ttgaggcaaa
      841 tactatcttt ttgttgctca ttacgttgtt gaatacgatt ttaatatatc taaggttgga
      901 aggaacatta tctaatcttg taatatttga agtttcagaa ataatcatag taaaaagaat
      961 agcaattgat cttcaggtag aaaatgaaat cgtcacagta gctatatcgc tcgagtaata
     1021 gtaataaata aatgaataaa tacaatcatt tatttacaat tataataatt tataataatt
     1081 taattcgcat agatttactg tataagataa cgaaattgaa aaagtcggat ctatcgcatg
     1141 atactatact ttgtatattt tcgatgttta taggcgactc tatataacta gaaaaacaaa
     1201 taaaaaatga tgaaggtgtt gaaacaaaag ttatgaattc caaaaatgat atatctggaa
     1261 tacaccacat tactgccatt tgcagcgatc cacaaaaaaa tattgatttt tatacaaaat
     1321 tgttgggact tcgactagtc aaattaactg taaactttga tgatcctagt acgtatcacc
     1381 tctactatgg cgatgaaata ggtcatccgg gaactattct gacattcttt ccatggtcca
     1441 aagccccaaa aggttataga ggtacaggtc aggctgttac aacatctttt ctagtacctc
     1501 aaaactccat tgaatactgg agaaatcgtc taaagaataa tgatgtttgt tttgaagaac
     1561 ctacaaaacg gtttgaagat gagcaagtaa taagactata cgatccagat ggtctagaat
     1621 tggaacttgt cgcgcattca tcagctgaca aaaatgatga aaggttttgg aaggagggac
     1681 ccatttcata cgaaaacggt ataagagggt tttattctgt aagtctatct gaagaaggat
     1741 acgaacgtac ttcagaaatt ttatgtgagt taggatacaa aatgatagca aatgaaggaa
     1801 atcgtttccg ctatcaatta gaaaatgcac aaggtgtaac aggctcaaaa atactggatg
     1861 tcctttgcct accttatact cctaatggaa ttattggaat aggaacagtt catcatattg
     1921 catttagaac tccatcagat gaaaaacaaa aatctattag agatagtatc ataaaaattc
     1981 gcctaaatcc tacacctgta ctcgacagaa catattttca ttctgtatat tttagggaac
     2041 caggtggtgt tctatttgaa gttgctacag acccaccagg atttacagta gatcagaaga
     2101 tacaagacct aggaaaaaga ctcatgttac caagatggct tgaacctgta agagaaaaat
     2161 tggaaaggat tttaccaaag atcgatctat tctgaaaaca ataaaaattc tcaaaatgaa
     2221 aagggactac aatgataagg tcaaacgact ttggatttac acatatttat tcttcttcta
     2281 acgatctcag agaagatgac agtaataaaa agaaactaac atttgtatta ttgcatggta
     2341 caggtggcaa tgaagaagac cttatgtttc ttggcaagga aatagaaccc aatgcatctc
     2401 tactaagtcc tcgaggcaaa gtattggaaa atggtatgcc ccgtttcttt agaagattat
     2461 ccgagggagt atttgattta gaagatctta aatttagaac atatgagctt gcagacttta
     2521 ttcaaaattg ttcatcatat tatgaattta acttgcaaaa tacagttgca attggatttt
     2581 caaatggagc taatattgct gctagtatgg ttcttcttcg tccagaagtg ctacatggtg
     2641 caattctttt cagagccatg gttcccctaa ttcctgttta tactccagat ctttcaaaca
     2701 aaaaaatcct attatctgca ggattaaatg atccgatagt accaaggatc gaaacagaaa
     2761 atctttataa aatatttgag aaaaataatg caatcataac cttaaagtgg caatcatcag
     2821 gtcacaatct aattcaagag gatatattga ttgcaaggaa ttggatctcg aataattttt
     2881 cagctgagaa gcaatagtta acaattccgt tattagaacc aaaacaaaaa gaaaccaaaa
     2941 ctgatgacat ttttgatttt caattcattt ttctgattca cagtattttt ggtcgggtgg
     3001 acctaattag ataactaact aacgtcacaa tggcagaagt ggtttatgca ataaatcata
     3061 cttaatttgc ccttttactg tcttattcgt agatttgcta gctcaaagaa ataaacaaac
     3121 gaaagatgac ttttgttttt cgaaaaagca aaatatcgag ttctctataa ataaattaaa
     3181 aacaatgtat aaccacacac atgaaagaga tatagaaaat gtattaatat tacagggtgg
     3241 aggttcgtta ggagcttttg cgtgtggagt atgtaaagca tttgcaaaaa aagatataaa
     3301 atttgatata gtagcaggaa catcgatagg agcaattaac ggagcgataa ctactggaag
     3361 taaaaatgac aatcctgaaa aagatttaga agatttttgg atggagcttg cccaaagtag
     3421 ttataatata atacctgacg tattttcttt tgattatgat gatcaaaatc atcagtttaa
     3481 tatcaagaaa tcatctgcag catcattaaa tgcagcttta tttggagttc caaagttctt
     3541 tgttcccaga tggatgaatt ggaatatgta tatgtgtaat ccttcaaagg attttccttt
     3601 acagtcatca aattggactt atatatacga taatacttta ctagaaaaaa cgctagacaa
     3661 gtacatagat ttcagaaaac tctctccgga tacaaaacaa agcaataaaa atggtcaaaa
     3721 tggtaacaat aataacacac gtcttataat cactgccgtt gatgttcttt ccgctgaacc
     3781 aataatattt gacagttaca aaatgcaaat acagatgaaa catctcttag ctacaattgg
     3841 atatcctcaa tacggatttc catggataga ggtaaatgac agactatatg catgggatgg
     3901 atcattgtta agcaatactc cgatacgaga agttatgacg gcttctccaa gtaaagataa
     3961 aaatatcttt gtagttgaga attttcctaa aaaaatagga aagcttccat ctgatatgag
     4021 tgaagttcaa tcccgagcca aagatataat gtttacagat aaggaccaga gtcttgaaaa
     4081 aatgtccaga ctcataacta ggcatattaa tttgattgaa acgttatatg acgtttttaa
     4141 ggaacatgat tcttcaaaga tagacaaaga tattattaat tacgttgaaa aagagcataa
     4201 aatattggta gaaaaatatg gcgccaaaat cctaaatatc aaaagaatca gtcgagaaaa
     4261 caataagaga ccgtatccaa tgcaaaatgc tgacttttct gttaatacta ttaaagagct
     4321 gattgtcgaa ggagagaata aagctctgga gagtttaaaa taactatctg attaagtagt
     4381 aaatttgaga aaaaaatact ttgttagcgt ctatcgcaaa attaccttgc tttgtaatga
     4441 cctacttggt agttgcacaa tactatggta gcatctgttc ttctaatatg ttataagtaa
     4501 ttcagagtca attaatcctt gaatatgttc tctctataac taacgttact atttgatgtc
     4561 tatctctaca caatttcttt ttcttttaaa tgcaattcaa tatgtatctt tctatagttt
     4621 catttttgat ttctttagaa taataagctt gatcaaaaca taaatcctca ttcttttttc
     4681 tcatatcatt atttttttat ggttggaaat tatgtctcaa ccagatatag atattctagg
     4741 cgagttagag acgccattta tgagagaacc gaatactccc tattgattgc ttcaacttac
     4801 cagccgagta taataaaggt tagattactg ctcagaatat tcacaaagcg ataaatcttt
     4861 gaactcgttc ggtatttttt ctatcaccat aatcagataa tttagatatt aatttattat
     4921 ttgatatgag atctaaactt caataataat agtattaata tactctttat cat
//
LOCUS       DATIAS010000015         2256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_820416, whole genome shotgun sequence.
ACCESSION   DATIAS010000015 DATIAS010000000
VERSION     DATIAS010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820416"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="VLA74_00290"
     CDS             complement(<1..679)
                     /locus_tag="VLA74_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF49173.1"
                     /translation="MITSGKRIVLTADRSLMTNYRGNFLYGFIACGPYELVPEFVFDK
                     LFCPSVETDKESGEVKVAQCGLRRIEGALLKEYNREEIFLAHPEMLNKCIGPETKVVG
                     INVMDPLGMAPVTTTMSPEKLSYVAMKFKKMCASIIQLKKKYNFKVVVGGNGAWELAK
                     PDRMKIHGIDTVVIGEADELALDLFHDLEQGDAPELLHTFVRNIDNIPKIKGPTINSL
                     IEAMRGCG"
     gene            complement(776..1201)
                     /locus_tag="VLA74_00295"
     CDS             complement(776..1201)
                     /locus_tag="VLA74_00295"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSF49174.1"
                     /translation="MNIEKSVGAVIKYQTSPSKIKDPEFLLLRNRRGYWGFPQGHKEE
                     GETEIQTLFREVYEETGINSLNILSFIGRIKYSFFKGEGIKSRKEVSFYYATTNVRDI
                     TLSNEHDDFIWATFSEALTYLNRKQLKSIMIEGHEKGLY"
     gene            1290..1363
                     /locus_tag="VLA74_00300"
     tRNA            1290..1363
                     /locus_tag="VLA74_00300"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1324..1326,aa:Ala,seq:ggc)
     gene            1416..2117
                     /locus_tag="VLA74_00305"
     CDS             1416..2117
                     /locus_tag="VLA74_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49175.1"
                     /translation="MYFINWERKITRTKLGNSIVVVKRNKSFTSLRQFILIFCFTLMS
                     ICSGNPANPPEIGKRILDNESSESRNKLKLIGINCPKLFSITDEEIIEEYIDGGNLYS
                     FFTIEKSNDLALQVGKITGKLHNNGLVFVDNKCQNFLVTKEKELIRIDLGFIQKSDSV
                     FAQSMDIGSFLASILDLEPQRYRLLEKEFLIGYRIMTNKKIPYLSIILRNILALGFGY
                     SHKNMLKNMLNKNYP"
BASE COUNT          768 a          358 c          306 g          824 t
ORIGIN      
        1 gtccacatcc tctcatagct tcaatcaatg aattaatagt aggtcctttt attttgggaa
       61 tattatcaat attacgtaca aatgtgtgta acagctcagg agcatcacct tgttctaaat
      121 catgaaataa atctaaagct aattcatctg cttctcctat tacaacagta tcaattccat
      181 gaattttcat tctatctggt tttgctagtt cccatgctcc atttcctcct accacaactt
      241 taaaattgta ttttttcttt aattgtataa ttgaagcaca cattttctta aatttcattg
      301 ctacatagga taatttttct ggtgacattg ttgttgtaac tggtgccata cccaaaggat
      361 ccattacatt aattccaaca acctttgttt caggccctat acatttattt aacatttctg
      421 gatgtgctaa aaaaatttct tctctattat actccttaag taaagctcct tctattcttc
      481 ttaatccaca ttgagcaact ttaacttccc cagattcttt atccgtttca acacttggac
      541 aaaaaagttt atcaaaaaca aattctggaa caagttcata tggtccacag gctataaaac
      601 cataaagaaa atttcctcga taattagtca ttaaactcct gtctgcagtt aaaactattc
      661 tcttaccaga agtgatcatt ataataatcc tcttacctca tcctcataga atcagatata
      721 aattgattat cataagctta ctattatcta gtgtcgtatt actcgataca attattcaat
      781 ataatccttt ttcatgtccc tctatcatta ttgatttcaa ttgctttcta ttaagatagg
      841 ttaaagcttc tgaaaatgtt gcccaaataa aatcatcgtg ttcattagaa agggttatat
      901 ctcgaacatt agtagtagca taatagaaac taacttcttt tcttgatttg atgccttcgc
      961 ctttaaaaaa cgaatatttt attcttccga taaaagataa tatatttaaa gaatttattc
     1021 ctgtttcctc atatacctct ctaaatagag tttgaatttc agtttctcct tcttccttat
     1081 gaccttgtgg aaatccccaa tatcctcgac gatttcttaa taatagaaat tcaggatctt
     1141 ttattttact tggcgatgtt tgatatttta tgaccgcacc aactgatttt tctatattca
     1201 cactacatta attttttaga aaacagaatt ataatattgt ttcttaaaaa tattaatatc
     1261 gaattaagtt ttatttttaa taatgttggg ggccggtcgt ctagtctggt aggatacggc
     1321 attggcattg ctgagatcgt gggttcgaat cccacccggt ccactaataa tttattaata
     1381 aaaattatta atgaattaag atattcaaaa atcagttgta ttttatcaat tgggaaagaa
     1441 aaattactag aaccaaatta ggaaatagta tagtagtagt aaaaagaaat aaatccttta
     1501 cgagtcttag gcaattcatt ttaatttttt gttttacttt aatgtccatt tgttccggca
     1561 atccagctaa tccgcctgaa atcggaaaga gaatattaga taatgaaagt tctgaatcac
     1621 gaaataaatt gaaactaatt ggaattaatt gcccaaaact cttttctatt actgatgagg
     1681 aaataattga agaatatatt gatggtggaa atttatattc tttttttact atagaaaaat
     1741 caaatgatct tgctttacaa gtaggaaaaa ttactggaaa attacataat aatggtttgg
     1801 tatttgtaga taacaaatgt cagaattttt tagtaaccaa agaaaaagaa ttaataagaa
     1861 ttgatcttgg atttattcaa aaaagtgatt cagtatttgc tcaaagtatg gatataggta
     1921 gttttttggc aagtatctta gatttagaac cccaaagata tagactatta gaaaaagagt
     1981 ttttgatagg atatagaata atgacaaata aaaaaatacc atacttgtca attattttaa
     2041 gaaatatact cgcattagga tttggttata gtcataagaa tatgttaaaa aatatgttaa
     2101 ataagaatta tccttagata ggaggaagtt cctgtctttt gtcaaatcct cctgaaccaa
     2161 atttgcaata aaaacattga tcacagtgca tgtatggtat tttttggata attattgctc
     2221 ctagctttaa agcaaatttc gtcataagtc tatgct
//
LOCUS       DATIAS010000016         3545 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_956934, whole genome shotgun sequence.
ACCESSION   DATIAS010000016 DATIAS010000000
VERSION     DATIAS010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3545
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956934"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VLA74_00310"
     CDS             complement(<1..434)
                     /locus_tag="VLA74_00310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49176.1"
                     /translation="MKYFRNILKKFLNQIKLAYISIEVGNSLKSNSLVNYQRTKKKIP
                     ILKDVIGHYNNLIDISKTLGSKNISVIDTIKSYDIFSATGTVGSSSSNIYFPNVASNG
                     FLPFYLDLINLQKYIKDKFQTPFGDLLNNNVFSVFVSDVSNFA"
     gene            complement(810..1217)
                     /locus_tag="VLA74_00315"
     CDS             complement(810..1217)
                     /locus_tag="VLA74_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49177.1"
                     /translation="MTKLTKEDILEGTRKRITVSLEEYDGKEVIVRPLSDSEVSKIIS
                     IIGPLSLSENEKKKDDMNLDIDIHKNIEALRLATEIGLVEPKLTKEEIQSMKFGVPER
                     IGTIILEISGVSSSSPSPSSPSSSEALKKKSRK"
     gene            complement(1332..1742)
                     /locus_tag="VLA74_00320"
     CDS             complement(1332..1742)
                     /locus_tag="VLA74_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49178.1"
                     /translation="MSSSPLLIAASTSKLTIDGKDVPGVQSLDFKISRNRQNIHSVSS
                     DERIGAYYGALYVQGSIKIRSAFPDLDKKLYETIPKLKHFQIMIELHPQGSDQLVKKI
                     TFDECYVEDKVFGMDATGVAITTYNFTSTRIREE"
     gene            complement(1761..3140)
                     /locus_tag="VLA74_00325"
     CDS             complement(1761..3140)
                     /locus_tag="VLA74_00325"
                     /inference="COORDINATES: protein motif:HMM:NF016845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HSF49179.1"
                     /translation="MVRVIPGVEINVVKEIVPQQLYPAGVVGMIGTANEGPVGTSVTV
                     TSYREFLEYFGPEEAGFTLHKEVKKAFLNGVFQVVATRVGGDHSYPASAVLKSNNSKK
                     KESMKLVARELGEKGNKIQVKVMRGATENTVRLEISAKNHLPEEYENLSLLKDNDFYI
                     EKILNENSRIVTAQLLSEPSLENIPIPQEVSLSGGQMGPPSIADYEQALEQLELEENI
                     DVVYVTDNWDPEIHALVDAHCQNMSIGKEPKPLGPRIGIGTVAPNELVNDIIKRTTRL
                     ASDRFILVAPYGLAGGVAGLISKLSYYESPTFKPLTGVSSLERRFTPSEQMKLLTNGI
                     LPIDSVRGRGIILVKGITTSKEQISVMRIADRSVRGVKNVSDLFIGTLNNERGRLALK
                     ERITEFLIGMEREGSIVPTTDGSQPAFIVDVYSSQSDFAQGIVRTDIAVRPVRAMDYI
                     YATVNVKAY"
BASE COUNT         1106 a          633 c          467 g         1339 t
ORIGIN      
        1 gcaaaattgg acacatcaga aacaaaaact gaaaaaacgt tattatttaa taaatcccca
       61 aatggagttt gaaatttatc ttttatatat ttctgtaaat tgataagatc aagataaaat
      121 ggtaagaatc cattgcttgc aacattagga aaatagatat tgctactact acttccaact
      181 gttcctgttg ctgaaaatat atcatatgat tttatagtat caataactga aatatttttt
      241 gatcctaatg tttttgaaat atcaataaga ttgttataat gacctataac atctttaagt
      301 ataggtattt tttttttggt tctttgataa ttaactagac tattactttt aagagaattc
      361 cctacttcta tacttatata ggctaattta atctgattta gaaatttttt taatatgttt
      421 cgaaaatatt tcaaattata gatgtaagat ttagtagtat tgttaatttt tgaaattgaa
      481 aaactattta ttaaaatctt attataattg ttaataatat ttttttttaa aaacttggac
      541 gtgtcataag aatattttac taacttctca cagttaccaa tatacaacat cttcaaatat
      601 acatcatccc tcttggttga aaactatacg agttatacct tggtctgcta gatatgatgt
      661 ttcttcggct tgacgtctca attttaatga gtaaagaaga aaattaattt gatctctagt
      721 aagatctcca gcaaaattgg ctaatttata gttaagatct agacaaagta tagagagttc
      781 tcttccttct tgagtttgta caaaagattc tatttcctgg attttttttt taaagcctca
      841 gaagacgaag gagacgaagg agaaggagaa gaggaagaca ctccactaat ttccaatatt
      901 attgttccaa ttctttctgg aacaccaaac ttcatagatt gaatttcttc ctttgttaat
      961 ttgggttcaa caagaccaat ctctgttgct aatcgtaatg cctctatatt tttatgtata
     1021 tctatatcca gattcatatc atcttttttc ttttcattct ctgaaaggga aagaggcccg
     1081 attatagata ttattttaga aacttcagaa tcagagagag gtctaactat aacttcttta
     1141 ccgtcatatt cttcaagcga tactgtaatc ctttttctag ttccttctaa aatatcctct
     1201 ttggtcaatt ttgtcatata atatttcaca ttttataatt ttaataggat taaagtaata
     1261 tctctagctt tactctattc tttccttcct tatttcttta cttactttct cttgtctcct
     1321 tcttcctctc tttattcttc ccttattctc gtagaagtaa aattatatgt agtaatagct
     1381 actcctgttg catccattcc aaatacctta tcttcaacat agcattcatc aaacgtaatt
     1441 tttttgacca attgatcaga accttgagga tgtaattcaa tcattatttg aaaatgtttg
     1501 agttttggta tggtttcgta cagtttttta tctaaatcag ggaatgctga tcttattttt
     1561 atggaacctt ggacatataa cgcaccataa taagctccaa ttctttcatc agaacttact
     1621 gaatgtatat tttgcctatt ccttgaaatt ttaaaatcta gtgattgtac accaggaaca
     1681 tctttaccgt ctatagttag cttacttgtg cttgctgcaa ttaataatgg tgatgatgac
     1741 atttttcaca aactcctctt ttaatatgcc tttacattta cagtagcata aatataatcc
     1801 attgcacgaa ctggtctaac tgctatatcc gttctcacta taccctgtgc aaaatcagac
     1861 tgagaagagt acacatcaac aataaatgct ggctgagatc catcagtagt tggtacaata
     1921 gatccttctc tttccatccc tataagaaat tcagttattc tctcttttaa tgctaatctg
     1981 ccacgttcat tattcagtgt cccaatgaaa aggtcagaca catttttgac cccacggaca
     2041 gaacgatccg ctattctcat aacactaatc tgttccttac ttgtggtaat tcccttgact
     2101 aagataatac ctcttcctct aactgaatca atcggtaata ttccatttgt caagagtttc
     2161 atttgttcag aaggagtaaa tcttctttct agactggata caccagtcaa tggtttgaat
     2221 gtaggtgatt cataataact gagtttactg atcagtccgg caacacctcc agctaaccca
     2281 tagggagcta ctagaataaa tcgatcacta gctagccgtg ttgttctctt tataatatca
     2341 ttaaccaact catttggtgc cacagtacct attcctattc taggtccaag aggttttggt
     2401 tctttcccta tactcatatt ttgacaatga gcatcaacaa gagcatgtat ttcaggatcc
     2461 caattatcag taacatatac tacatctatg ttttcttcta actccaactg ttccaatgct
     2521 tgttcataat ctgctataga aggtggcccc atctgtcctc cactaagtga tacttcttgc
     2581 ggaattggaa tattttctaa tgatggttcg ctcaacaatt gtgcagttac aattcgagaa
     2641 ttttcattta aaatcttctc tatataaaag tcattatctt ttaacagtga taggttttca
     2701 tattcttcag ggagatgatt tttagcagaa atttctagac ggacagtatt ctccgttgct
     2761 cctctcataa ctttaacctg tattttgtta cccttctccc ctaattctct agctactaat
     2821 ttcattgact cttttttttt gctattatta ctctttagta ctgctgaggc aggataacta
     2881 tgatcccctc caacccttgt ggcaacaact tgaaaaactc cattaagaaa tgcttttttt
     2941 acctctttat gaagcgtaaa tcctgcttct tccggtccaa aatattcgag aaattctcta
     3001 taacttgtga cagtcacaga tgttcccaca ggtccttcgt tagcagtgcc tatcatgccg
     3061 acaacaccag caggatacaa ttgttgaggt acaatttctt taacaacgtt aatttctaca
     3121 ccaggtatta ctcttaccat gtacaaatct ttaagaaaaa agtaatatat aacaattttc
     3181 ttgtaattat agaataatta tattattttg atcgtttgtt taaattatta aaaattgatt
     3241 gatatatctg tcgatctttt acaagatctc tatattttta acaatgataa taattgcctt
     3301 atttaaaaag gaaaatgaat ttaaaagaat gttaccgaat taatatctaa aatataatat
     3361 ttctaaatat agtttgtacc tttctttatc catccaacag tataataagc gttttttata
     3421 gcaatattac caaagataat attgtctttc caacctatag caagaatatt tagtttatat
     3481 attatatatt taatagcaaa tttctataac attatcttta gctttattat tagttattac
     3541 gttat
//
LOCUS       DATIAS010000017         2580 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_547956, whole genome shotgun sequence.
ACCESSION   DATIAS010000017 DATIAS010000000
VERSION     DATIAS010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_547956"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VLA74_00330"
     CDS             <1..250
                     /locus_tag="VLA74_00330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49180.1"
                     /translation="NEKAEIFKKIEPYLTFLNIPQLERQGADLQTKIEELQIINQSLR
                     DNDKVKEDALAHLSDQLVVLSERIQQLEIKQSYYPNIS"
     gene            665..1573
                     /locus_tag="VLA74_00335"
     CDS             665..1573
                     /locus_tag="VLA74_00335"
                     /inference="COORDINATES: protein motif:HMM:NF018400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1186 domain-containing protein"
                     /protein_id="HSF49181.1"
                     /translation="MSLDSSSNTTVAKNNIQDLIERFSRLGPNTDFNIIEQLLSRKDE
                     SLPYIIDIAQDDKYWFPEDGEYASWTPVCALHLLSVIGGTEAINAFIKSVKEYYDDTA
                     DWITEDMPAILANFGIEAFENIRNMLLNKDEVDMFVRAGAARALFLISEKYPDTREKS
                     IKALRDAISFENDEVARSCFMYELVHFKDHDSLPFIEFYFKNDMINDGWMILDDVYQY
                     YYESGSDSNSSLGNTMAKDSLDIFKDSPDNFYRNSNTGKYLPSTKSNNDYQPPSKKIL
                     KKEVGRNDPCPCGSGKKYKKCCLKIV"
     gene            complement(1966..>2580)
                     /locus_tag="VLA74_00340"
     CDS             complement(1966..>2580)
                     /locus_tag="VLA74_00340"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HSF49182.1"
                     /translation="FGRLLCYLYKEHENYNLKLIKEGWSPYFEKYGRSRLYHKELNNA
                     EMLAQSKDLLIWNIIENESGHTRGNYTQLKNWWNTRALVVEDYRNHGISAGVLSVRLD
                     YDKILLAAENEDEETILCDLQDGINKWTGGGALIYAGSKYHKFNLWIPDRTEENAIEI
                     INLVEKRYSGQGRGYVYVKGKVTKYNNIPQIILTSSNQLSDFPL"
BASE COUNT          969 a          381 c          353 g          877 t
ORIGIN      
        1 taatgaaaaa gccgagattt tcaagaaaat tgaaccatat ttgacttttc taaatattcc
       61 acaattggaa agacaaggag cagatttaca aaccaagata gaagaactac agataataaa
      121 tcaatcatta agagataatg ataaagtaaa agaagacgca ttagctcatt tatcagatca
      181 actagtagtt ctaagtgaaa gaatacaaca attggaaatc aagcaatctt attatcctaa
      241 tatttcttag tttcgataaa taatctgtat tcttcattct caattcaagt ctataatctt
      301 gaattaagtt ttaatttact ctacaaggaa cttaaaatat tgtctctctc gggtcccaaa
      361 atattttcaa cgtgtgacaa cctcatatga cagtgtcaca cgctgaaaca aaattatccc
      421 tagaggcaga gataaaaata catcaaatta attttttaat tctatattac taagttgaat
      481 tcaatcatgt tctatgtatc tcaattgagt tatttgaaaa tttcaaaatg attatcatag
      541 agatgggata aaatattgtt gttctctatt atattatgat aaattctaaa taaattaaac
      601 cataactcct aaaaatcaat ctacctaaaa ataataagaa agtatagaca ttatattata
      661 tagtgtgtca ttagatagct cctcaaatac tactgttgca aagaataata ttcaagatct
      721 aatagaaaga ttttcccgcc ttggacctaa tacagatttt aatataattg aacaactttt
      781 atcaagaaag gatgaatcat taccttatat tatcgatata gctcaagatg acaaatattg
      841 gtttcctgaa gatggtgaat atgcatcatg gactccagta tgtgctctac atttgttatc
      901 tgttattggt ggaacagaag caatcaatgc tttcatcaaa tctgtcaaag aatattatga
      961 tgatacggca gactggataa cagaagatat gccggcgata ctggctaatt ttggtattga
     1021 agcatttgaa aatattagaa atatgctact taataaagat gaggtagata tgtttgtaag
     1081 agcaggagct gcaagagcac tatttttgat ttctgaaaaa tatccagata caagagaaaa
     1141 atcgataaaa gcattaagag atgcaatatc ttttgaaaat gatgaagtag ccagaagctg
     1201 ttttatgtat gaactggtac actttaaaga tcatgattcg ttacctttta tagagtttta
     1261 ttttaaaaat gatatgatca atgatggttg gatgatcctt gatgatgtat atcaatatta
     1321 ttatgaaagt ggtagtgatt ctaatagtag tttaggcaat accatggcaa aagattcgct
     1381 tgatattttc aaagatagtc ctgacaattt ttatagaaat agcaatacag gaaaatattt
     1441 accatctaca aaaagtaata atgattatca gccaccatca aagaaaatac taaaaaaaga
     1501 agtaggaaga aacgatcctt gtccttgcgg tagtggcaaa aaatataaaa aatgttgtct
     1561 taaaattgtt tagacttatg tacgattata aatgaattgt tgcaagacat atcagtgatt
     1621 ttgaaaaata aaaaaaagat agattataat aatatcattt taaaatattc tatttagata
     1681 caaattactt tatacatatg acaattagat taagcgaaca aaatttctta tataaaatag
     1741 gaaatcataa taacaagcat aactgtacaa cattttggca agataaatac taaaaaaatt
     1801 cttcctctct ccatctaaaa taatttcatc gtgtgacatt gtcacaccaa aactgtcaca
     1861 cgctgaaagt aaatttaccc ccagagactg acaaactttt taattgtaag atgagaattc
     1921 aatcttttaa gtatatatca ataattaatt actaataaaa agaaattaaa gaggaaaatc
     1981 tgataattga ttcgaagatg ttaagataat ttgtggaata ttattgtatt tggtaacttt
     2041 tcctttaaca taaacatacc ctctaccttg acctgaatat cttttttcta caagattgat
     2101 tatttctata gcattctcct cagtgcgatc tggtatccat agattgaact tgtgatattt
     2161 agaacctgca tatatcaaag caccaccacc tgtccattta tttattccat cttgaagatc
     2221 acataatata gtttcttcat cttcgttttc tgctgctaaa agtatcttat cataatctaa
     2281 tcttacagat aaaactcctg cacttatgcc atgatttcta taatcttcaa ctactaatgc
     2341 tctagtattc caccaattct ttagttgtgt ataatttcca cgtgtatgtc ctgattcatt
     2401 ttctattata ttccatatta acaaatcttt tgattgcgct aacatttctg cattgtttaa
     2461 ttctttatga tataatctgg atctaccgta tttttcaaaa taaggactcc atccttcctt
     2521 aattagtttt agattataat tctcatgttc tttatataaa taacataata aacgaccaaa
//
LOCUS       DATIAS010000018         6158 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1910664, whole genome shotgun sequence.
ACCESSION   DATIAS010000018 DATIAS010000000
VERSION     DATIAS010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6158
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1910664"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VLA74_00345"
     CDS             <1..475
                     /locus_tag="VLA74_00345"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF49183.1"
                     /translation="NNVGKGMKIVGNLYYYFFDYYSELKQMVLDLGLTDYITFEINAS
                     LDKLLSIIRESRVYFHPMIGEHFGMSVLEAMAAGLIPVVPNEGGLIEFVPQEYQFNTI
                     EQAAEIIMYVFNHLPRTERIKISDDINKFSNYHYIEGFQNILNELLPRRRNNNVC"
     gene            1288..2127
                     /locus_tag="VLA74_00350"
     CDS             1288..2127
                     /locus_tag="VLA74_00350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HSF49184.1"
                     /translation="MAARTIWKGSISFGLVNIPIQVFVATQKDEFSSFNQLDEKGHKI
                     KYKKWCPVEKREVSWSEIKKGYEITKDNYVILEKQDLDNIKLKTTHTIEIKEFIDSED
                     FDPLFIEKNYYIGPDIGTTKKKNISPSSSKAYSLFVKILNETNKIAIGKVVFRDREHL
                     VALRSYQRGLVLHQLKYLDEIRPMDEIEGISNSQQPKVEDNELSLGKTLVDTLTRQQF
                     DIGKYSDAYAKELEKLIEAKSKGQKITVEEDEEKLADTTNLVEALKASISTKSRPRRQ
                     KRN"
     gene            2660..4195
                     /locus_tag="VLA74_00355"
     CDS             2660..4195
                     /locus_tag="VLA74_00355"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HSF49185.1"
                     /translation="MLEEYNKKRNFGRTPEPRGNKKQLKDNKSRSFVVQKHDATKLHY
                     DFRLEDTKEGILKSWAIPKGISLDPKIKRLAILTEDHPLDYLLFEGVIPEGSYGAGTV
                     IVWDTGTYTSEIELSEQFNKGKITFTLFGQKLKGKFTLIRTHLAKGKEGNQWLLMKSA
                     DEFESKEDLTITKPRSVLTSRINEDLVEEKQKEEKKEKESSKKKENNKIYFTQTIKKS
                     NNHLNDITAFPNHHQQQKRFDEFPTKIKPMLSTLVDKPFNSIDWVFEIKWDGVRSILF
                     FNKIKRILEFRSRNDQLLTHRYPELVDALTSPLPSSLSQLSINCKTSVILDGEIVVLD
                     NKTGLPSFQNHQKRMNVDSDREIEILSKQIPATYYFFDILYINGKNLQDLPFLERRLI
                     LSETIKENTRIKISDFIEEVGTEVFDKTKSMGLEGIIAKNKTGKYVQGRRSRDWLKIK
                     HIKTQDCVIIGYTKGEGNRKIILVLFFLQLMIKKISYDLLVILEVDLIFSNFNRYMIN
                     FRK"
     gene            4309..5475
                     /gene="ligD"
                     /locus_tag="VLA74_00360"
     CDS             4309..5475
                     /gene="ligD"
                     /locus_tag="VLA74_00360"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HSF49186.1"
                     /translation="MRSPIFLRFREDKISKECILEMEKYTNTVIETVEVESSKENKSN
                     GYYKIKESSNNYFDSSFSNLDKIFWDKTTIHPQLTKKDLIEYYKKISNHILPYLKDRP
                     LSLNRYPDGIKGKSFYHKNWNQNNKPTYVQTVKVYSESRKENIINYIICNNKETLLWL
                     ANLGCIEMHPWYSRIKDFDACKQRNDILSDEKCGLNFPDFIVFDLDPYIYSGKEIKGQ
                     QEPEYNFKAFQATVDVAYRLKELFDELNLESYVKTSGKTGLHIFVPIVNLYTYDQTKS
                     FAEIIGKILSRRYPGKITMEWDTTKRTGKVFFDYNQNARGKTIASIFSPRPTDLTTVS
                     VPVRWEDLTNVVPTDFTILNVPEILNNQISNPWIDIMKKKQNLNELLENVKEIF"
     gene            5620..5829
                     /locus_tag="VLA74_00365"
     CDS             5620..5829
                     /locus_tag="VLA74_00365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49187.1"
                     /translation="MIEKEEIVNARFTILLRIIITLTTITIIPILISDSESQQEQGVT
                     PVDSQMLLIKHYRVIQLKIRICQLV"
BASE COUNT         2469 a          827 c          928 g         1934 t
ORIGIN      
        1 taacaatgta ggcaaaggaa tgaaaattgt tggaaatctt tactattatt tttttgatta
       61 ttactcagaa cttaagcaga tggttctaga tcttggtttg actgactata ttacatttga
      121 aattaatgct agcttagata agcttctttc tatcatacga gaatccagag tatactttca
      181 tccaatgata ggagagcatt ttggcatgtc agtattagaa gctatggctg ctggattaat
      241 cccagtggtt ccaaatgaag gtggccttat agaatttgtt ccacaagaat atcaatttaa
      301 tacaatagaa caggctgctg aaattataat gtatgttttt aatcatttgc caaggacaga
      361 gcgaattaag ataagcgatg atataaataa attctcaaat tatcactata ttgagggatt
      421 tcaaaacata ttaaatgaat tattacctcg aagaaggaat aataatgtct gctagtgtaa
      481 acattatatt tttaatgaac aagacagtca catatatcct cttcatttaa ctgtttttgc
      541 tactaacaat cattatttga tgattgtgta ataaatgaga ttgttatttt gttggtaatt
      601 atatacgaga aactgaattg aaaaaatgta ctttgtggta agaagatatc tagaacttta
      661 actttagcaa ttgtatttgc tatggtatag aatgtaatag tatagatatc ataaatttgc
      721 ttggagtgta tataattttg ttaaatcttc tctgcttaga atacaattga agatgcaaat
      781 gtctaatcta tacccagatt atttaataca aaaaaaccta ttatgaaatc tccttttttt
      841 attatttttt ccttttccac aaatacaata ccggtataga ttagaaaaag attttcaggt
      901 aattaggatc agctggaatt gaatattttt atttacagtt aaattattca ttaaaaattt
      961 caaatccttt aatggtaata gaaacttcat aaaaatatta ttcctaataa tcaaaccgtt
     1021 attgaacatt gaaaccgtgt ctattcaact cccgacgggc catacttttc tagggtccac
     1081 tatcttttca tgaaaagatg taaaaatgaa aaatgaatct acctaatatc atatgggatt
     1141 tagaactcca taaaatataa taattttcgt gtagttaaag aaaatgaaaa atttttcttg
     1201 ataatcatac tattaaatct tttacctaca ggtatccatt tctttgttcc ataggccttt
     1261 aaaagtttat agcttatatg attagtaatg gctgctcgaa ctatatggaa aggaagtatc
     1321 tcttttgggc tagttaacat accaattcag gtttttgtag ctacacaaaa agacgaattc
     1381 tcatctttta accaattaga tgaaaaaggt cacaaaatta aatacaagaa atggtgtcct
     1441 gtagaaaaaa gagaagtttc ttggtctgaa ataaaaaagg gatatgaaat tacaaaagat
     1501 aattatgtaa ttttagaaaa acaagattta gataatatca aattaaaaac tacacataca
     1561 atagaaatta aggaattcat tgattcagag gactttgacc ctctatttat tgaaaaaaac
     1621 tattatattg gtcctgatat aggaacaaca aagaagaaaa acatatctcc atccagtagt
     1681 aaagcatatt ctctatttgt taagatactt aatgaaacta ataaaatagc aataggtaag
     1741 gttgtgttta gagacagaga acatttagtt gctttaagat catatcaaag aggtcttgta
     1801 ttgcatcaac taaaatatct agatgaaata agacctatgg atgagattga aggtatttct
     1861 aatagtcaac agcctaaggt cgaggataat gaattatctt taggaaagac actagttgat
     1921 accttaacta ggcaacaatt tgatataggt aaatactcgg atgcctatgc taaagaatta
     1981 gagaaactaa tagaagcaaa atctaaaggg caaaagatca ctgttgagga agatgaagaa
     2041 aaattagctg atactacaaa tctagtagaa gcacttaaag ctagtattag cacaaaatcc
     2101 agaccacgta gacaaaagag gaattagaga cattaaaaga aaaatacaat ataatatatc
     2161 tacaacagaa aaatatataa aaactatgat gaggatactg acctctacta caaaattaga
     2221 attaaattag tataatgtca ccataaaaaa tacaaatatt atctttcaag atatcaaaaa
     2281 tatgaattct gtgaaaataa aaatgaatca aaaatataca atattatttt tgtatattta
     2341 ttataaaaaa ataggcaaga ggctaattaa aaataaattt ggagttacat tcttatcatg
     2401 tccattacta gaatgaatct attacaaata actattgtaa tcaaaatcca aaactccaag
     2461 tcgatgtatt tatcaaagat tgaaccaata tgatctacta aagatagagt taaaggttgc
     2521 ttcatggtct aacattctaa atgaaattat ttactatttg agtaatataa aaatagttac
     2581 cttttggtat gatgttattg actcattcta tcattaatga tccaactctt tcttatatgc
     2641 tatagactag ctgacgtgta tgttagaaga atataataaa aaaagaaatt ttggaaggac
     2701 tcctgaacca cgaggaaaca aaaaacagct taaagataat aaaagtagga gttttgtagt
     2761 acaaaagcat gatgctacca aattacatta tgactttaga cttgaagata caaaagaagg
     2821 aatattaaaa tcttgggcta taccaaaagg tatttcactt gaccccaaaa taaaaaggct
     2881 tgctattcta acagaagatc atccattgga ttatttactc tttgagggtg taatacctga
     2941 gggcagttat ggagcaggta ctgtaattgt atgggatacg ggtacatata catctgagat
     3001 agaattatct gaacaattca ataaagggaa aatcactttt actttatttg gtcagaaact
     3061 aaaggggaaa tttacattaa tcaggaccca tttagctaaa ggaaaagaag gaaaccaatg
     3121 gcttttgatg aaatcagctg atgagtttga atctaaagaa gatttaacta ttacaaaacc
     3181 aagatctgtt ttgaccagca gaataaatga ggatttagta gaagaaaaac aaaaagaaga
     3241 aaaaaaggaa aaagaatctt ccaaaaaaaa agagaacaat aaaatttatt ttactcagac
     3301 gatcaaaaaa agtaataatc atttaaatga tattactgct tttcctaatc atcatcaaca
     3361 acaaaagaga tttgatgaat ttccaaccaa aattaaacca atgctatcaa cattagtaga
     3421 taagcccttc aacagcatag actgggtttt tgaaatcaaa tgggatggag ttcgatctat
     3481 tctcttcttt aacaagataa aaaggatact ggaatttcga tctagaaatg accaattact
     3541 tactcataga tatccagaat tagtagatgc attaacttcc ccattgccat catcattgtc
     3601 tcagttatct ataaactgta agacatcagt aattttggat ggtgaaattg ttgtattaga
     3661 caataaaaca ggactgccaa gttttcaaaa tcatcagaaa agaatgaatg ttgattctga
     3721 cagagaaatt gaaattctgt ctaagcaaat acctgcaacc tattactttt ttgatattct
     3781 ttatattaat ggaaagaatt tacaagattt accattttta gagagacgat tgattctttc
     3841 tgaaactata aaggaaaata ccagaataaa gatatctgat tttattgaag aagtgggtac
     3901 ggaagtcttc gataaaacta aaagtatggg attagaagga ataatagcca aaaataaaac
     3961 cggaaaatat gtacaaggta gacgatctag agattggtta aaaataaaac atattaaaac
     4021 tcaagactgt gttattatag gttacactaa aggagaagga aatagaaaaa ttattttggt
     4081 tctcttcttc ttgcagttaa tgataaagaa aataagttac gatttgttgg tcatactgga
     4141 agtggattta attttcagca acttcaacag atatatgata aacttcagaa aataagaatc
     4201 gaaaaatgtc caattgaata tattccctac actaaccgaa atcctttttg gattaaacca
     4261 gaattagtag tagaaataaa atatagtaat tggactaatg aaaaaattat gagatctcct
     4321 atctttctta gatttagaga agataaaata tcaaaagaat gtattttgga aatggaaaaa
     4381 tatactaaca cggtaataga aacagtcgaa gtagaatcat ctaaagaaaa taagtctaac
     4441 ggttattata aaataaaaga aagcagcaat aattattttg attcttcctt ctctaatctt
     4501 gataaaatat tctgggataa aacaacgatt catcctcaac ttacaaaaaa agacttaatt
     4561 gagtattata aaaaaattag taatcatatt ctaccttacc ttaaagatag gcccttatca
     4621 ctaaatagat accctgatgg aattaaagga aaatcattct accacaaaaa ctggaatcaa
     4681 aataataaac caacatatgt acagacagta aaagtttatt cagaatcaag aaaagaaaat
     4741 attatcaact atattatatg caataacaaa gaaactctat tatggcttgc aaatttgggt
     4801 tgcatagaaa tgcatccatg gtatagtaga attaaggatt ttgatgcttg taaacaaaga
     4861 aatgatatct tatctgatga aaaatgtggt ttaaattttc ctgattttat agtttttgac
     4921 ttagatccat acatatattc aggaaaggaa ataaaaggtc aacaagaacc agaatataat
     4981 ttcaaagcat tccaagcaac agttgatgta gcttatagac taaaagaatt atttgatgaa
     5041 ctaaatttag aatcttacgt aaaaacgtca ggaaaaacag gattgcatat ttttgttcct
     5101 attgttaatt tatacactta tgatcaaact aaatcttttg cagaaattat aggtaaaatt
     5161 ctaagcagaa gatatccagg aaaaattact atggaatggg atactactaa aagaacaggt
     5221 aaggtattct ttgattataa tcaaaatgct agaggaaaga caatagcatc aattttttca
     5281 ccaaggccta ctgatttaac tactgtctcg gtccctgtta gatgggaaga tttaacaaat
     5341 gtggttccaa cagattttac aattctcaat gttcctgaaa tactaaacaa tcagatatca
     5401 aatccatgga tagacatcat gaaaaagaaa caaaacttaa atgaactcct ggaaaatgtt
     5461 aaagaaattt tttgatataa aactagacta ttataagtaa attagaaaaa gaaaaataaa
     5521 taaatatttt atttatattg taattttcaa ttttatcaat ctaatttcta ataactttct
     5581 atgaatgttt gatatgtatg tttcaattaa taaatgaaga tgatagaaaa agaagaaata
     5641 gttaatgcta gatttacaat attattaaga ataataatta cactaaccac tataactata
     5701 ataccgattt tgataagtga tagtgaaagc caacaagaac aaggagttac gccagttgat
     5761 tcccagatgt tactaatcaa acattacaga gttatccaac tgaaaataag gatatgtcaa
     5821 ctggtttaga aaataaaacc agtaacaatt agtgattata aaagatggca atactttgct
     5881 aaaactttag tagcaaatta gttataatta ttatttttat caatacactc aatcagaaat
     5941 agtggcaaaa gtgtctcaca atcctcttag ccatttactt ctatttatga tatcgaacac
     6001 tgaaattgtg gttattctgt agaaccaaga gacatatgtc atccctctcc tacaacaaca
     6061 ggtattaata atattctgtc cagtttaagt acttttacca atctagcata acacccagta
     6121 tctctctttc cagagtacct ttcttcggga tagtatcc
//
LOCUS       DATIAS010000019         3521 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1501577, whole genome shotgun sequence.
ACCESSION   DATIAS010000019 DATIAS010000000
VERSION     DATIAS010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501577"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..209)
                     /locus_tag="VLA74_00370"
     tRNA            complement(join(114..157,178..209))
                     /locus_tag="VLA74_00370"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(151..153),aa:Pro,seq:ggg)
     gene            complement(295..837)
                     /locus_tag="VLA74_00375"
     CDS             complement(295..837)
                     /locus_tag="VLA74_00375"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSF49188.1"
                     /translation="MFFYGAYIIWDRKFDFLKSVMVAPISREIIFIGKTVGGMTNSLI
                     QVFMLLIIGFFIGIDYTFISLLQIIFVSIILSFLLTALGLGLGSHMHSLEGFQMIVSF
                     VVFHLFFLSGALFPLDNLPDWLSFLTIIDPATYAVDALRNSILGIATYSFELDLLLLF
                     CSTIITTLFGILSFRKMRAV"
     gene            complement(1150..1290)
                     /locus_tag="VLA74_00380"
     CDS             complement(1150..1290)
                     /locus_tag="VLA74_00380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49189.1"
                     /translation="MKSIDNVESVEFSQPTLDDVFYTVTEGAINEVPEGGFMERYAQY
                     DK"
     gene            complement(1406..1780)
                     /locus_tag="VLA74_00385"
     CDS             complement(1406..1780)
                     /locus_tag="VLA74_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49190.1"
                     /translation="MLEILFINPRSFFLDEPTLGLDPNSRKSMWIYIQKLVKEEKITI
                     ILTTHYMEEADKLCNRIGFINKGKIIAIDTPEQLKRRIKNDNTGKYIGDTIKLYFKAK
                     EEEEDNSNENNFNNSNETIVKN"
     gene            complement(1839..2072)
                     /locus_tag="VLA74_00390"
     CDS             complement(1839..2072)
                     /locus_tag="VLA74_00390"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSF49191.1"
                     /translation="MLTTLLKPTSGTVEINGYDIVKNSSKVRKNIGIVFQAPSSDDML
                     TGFENLKIHSYLYGVPSKIRLYRIEELLKLVGL"
     gene            2276..2467
                     /locus_tag="VLA74_00395"
     CDS             2276..2467
                     /locus_tag="VLA74_00395"
                     /inference="COORDINATES: protein motif:HMM:NF024412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49192.1"
                     /translation="MIKRNTEESICHKTKDEEGVPYRTIAKNLGVNYRNVYEWIKKYR
                     ESGLDGIRNKRERMEVENQ"
     gene            2464..2631
                     /locus_tag="VLA74_00400"
     CDS             2464..2631
                     /locus_tag="VLA74_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49193.1"
                     /translation="MISSDRNKEMIKDTVLNKSPKTFGYLKNTWSIRLLATYLSSLLK
                     MNVSVLCRHGG"
     gene            2613..2771
                     /locus_tag="VLA74_00405"
     CDS             2613..2771
                     /locus_tag="VLA74_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49194.1"
                     /translation="MQTWRIIHDLGIVYKQPKLELEKGDDYEEKKNKIERYKKISAAL
                     LKKDSTWI"
     gene            2818..3078
                     /locus_tag="VLA74_00410"
     CDS             2818..3078
                     /locus_tag="VLA74_00410"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49195.1"
                     /translation="MKRGEQQKILHKGSNDKVNVFITLLYSLNGIKFNTSKTRNSNDF
                     INHLKSIKRYVLKRNVKRFIIVIDNASFHVSNKTKQETVMIS"
BASE COUNT         1323 a          561 c          487 g         1150 t
ORIGIN      
        1 agtaaaagag gatgctttag ctagtttatc agatcaacta ctattcttaa ccgaaagaat
       61 tcaagaaata gaaagaaaac aatcaaaata atattgtaaa tatgtctatg gaaagggttc
      121 tgtgggattt gaacccacga ccgccagcgc cccaggctta taccttcata ttgaagttgg
      181 tatcctggac caagctagac gatagcccct ctttttaaat ttatgaatta agctattacc
      241 tttattaaat gtagatcatt gttgttctca tcatttccat taccttaatc ttttttatac
      301 tgctctcatt tttctaaatg ataatattcc aaataatgta gttataatag tagaacagaa
      361 taaaagcaat aaatctaatt caaatgaata agttgctatt cctaatattg aatttcttaa
      421 agcatcaacg gcatatgtag ccggatcaat tatagttaaa aatgaaagcc aatcaggtag
      481 attatctaaa ggaaataaag caccacttaa aaagaataga tgaaaaacaa caaaactaac
      541 gatcatctga aaaccttcta aactatgcat atggcttcca aggccaagac ctaaagcagt
      601 aagtaaaaag gataatataa tagaaacaaa aattatctgt aaaagagaaa taaatgtata
      661 atcaattcca ataaaaaatc ctataataag taacataaac acttgaatca aagaatttgt
      721 cattccacca actgttttac caataaaaat tatttcacga cttattggag ctaccattac
      781 actttttaaa aaatcaaatt ttctatccca tataatataa gctccataaa aaaacagatg
      841 taaaaataat tgacatgctt ataattcctg gaaaaataaa ttgttgataa ttcacatcta
      901 ttgataaagt tgttgttgat cctaaacctg atccaactat aaacaaccat agtaatgggg
      961 tgaataagga tgcaactagt ctacttcttt ctctcaaata aaccttaaat tctcgtaacc
     1021 aaattgctta gacatttaag aaattatttt ttagtgtatt tattagtatt tgatttaatg
     1081 acatatcttt tgatttataa taatatatac aaaatatgta cagagatgta atacaataga
     1141 cttttattat tatttgtcat attgcgcata tctctccata aatcctcctt ctggaacttc
     1201 atttattgca ccttcagtaa cagtataaaa tacatcatct aaagttggtt gtgaaaattc
     1261 tactgattct acattatcaa tagatttcaa tatgataggt aaattatggt taatgtcatc
     1321 tacttgtaaa ataattacta aataattttt tccgtcaagt cttttttgtt ctattttttt
     1381 gacaaattta aatgatttta aaatcttaat ttttaactat tgtctcatta ctattgttaa
     1441 aattattctc atttgaattg tcttcttctt cttcttttgc tttaaagtac aatttgatag
     1501 tatccccgat atattttcca gtattatcat tcttaatcct gcgctttagt tgttctggag
     1561 tatctatagc aattattttg cccttgttta taaagccaat tctgttacac aatttatcag
     1621 cttcttccat ataatgtgta gtcaaaatta tggtaatttt ttcttcttta actagttttt
     1681 gaatatagat ccacatcgac tttctactat taggatcaag tcctaatgta ggttcatcta
     1741 aaaaaaatga ccttgggttt atgaataaga tctcgagcaa tttccaagcg cctacgcatt
     1801 ccaccagaat atttctttac aataccgtct tttctttctt acagtccaac taattttaat
     1861 aattcctcta ttctgtaaag tcttattttt gatggaactc catataaata agaatgaatt
     1921 tttaaatttt caaaaccagt tagcatatcg tcactacttg gcgcctgaaa tacaattcca
     1981 atgttttttc tcactttaga agaatttttt acaatatcat atccgttaat ttctacagtt
     2041 ccactagttg gttttagaag ggttgttaac atgtgaataa tggtagtttt tccagcacca
     2101 ttctgaccaa gttaagtctc taatctttta tcaacattat gctatccatt tagcataaat
     2161 atagaaatag atttagcttt gttatacatc tttcaacttg tgccaaataa tcctctcaga
     2221 ctagaattat ctactgtaca gaaaaaggaa ttattttcat tcatgaagag tactcatgat
     2281 aaagaggaat acagaagaga gcatctgtca taaaacaaaa gatgaagaag gagtaccata
     2341 cagaacaata gccaaaaatc ttggtgtcaa ttaccgtaat gtgtatgaat ggataaaaaa
     2401 atatagagaa tctggtttgg atggaataag aaataaaaga gaaagaatgg aggtagaaaa
     2461 ccagtgatat cttctgacag aaacaaagaa atgattaaag acacagtatt gaacaaatca
     2521 cccaagacat ttggctatct caaaaatacc tggagtatca gacttttagc tacatatctt
     2581 tcctcactat tgaaaatgaa tgtgtcagtc ctatgcagac atggaggata attcatgatt
     2641 taggtatagt atacaaacag ccaaaacttg aactggaaaa aggtgatgat tatgaggaaa
     2701 agaagaacaa gatagagagg tacaagaaga tatcggcagc tcttttaaaa aaagattcta
     2761 cttggatttg aagatgaaac atggttacat ctgcaaccat acataactag aacatacatg
     2821 aaaagaggag aacagcaaaa gatactccat aaaggatcta acgataaagt caatgtattc
     2881 attacacttc tctattcact aaatggaatc aaattcaata caagcaaaac gagaaacagt
     2941 aatgatttca taaaccatct aaaaagcatt aaaagatatg tactaaagag aaatgtcaaa
     3001 cgattcatca ttgtaataga caatgcatca tttcatgtaa gcaacaagac aaaacaagaa
     3061 acagtaatga tttcataaac catctaaaaa gcatcaaaag atatgtacta aagagaaatg
     3121 tcaaacgatt catcattgta atagacaatg catcatttca tgtaagcaac aagacaaaac
     3181 agtatataga aaaacagtca tactggctaa ctgtactatt tctaccaaca cgagctccat
     3241 tcctaaatat agtagaaaca aaagtaaaca gaaatctgaa aaaagatgta tgtgccaatt
     3301 acaattacga aacagaagag aatctattat gtactgtaag aaggtatctt agatgttttg
     3361 gtagttggcc taagatagat acttaacagt tatgtagtca tactcattac tcctatctgt
     3421 aaaatatcag ttatccttct accatgtttc tcattgtagt tgtatgtcca gtcagatact
     3481 gcttttccaa tatctggttc atttctaaag gtagaattgt t
//
LOCUS       DATIAS010000020         5880 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_820822, whole genome shotgun sequence.
ACCESSION   DATIAS010000020 DATIAS010000000
VERSION     DATIAS010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5880
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820822"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..606
                     /gene="rpl7ae"
                     /locus_tag="VLA74_00415"
     CDS             199..606
                     /gene="rpl7ae"
                     /locus_tag="VLA74_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7Ae"
                     /protein_id="HSF49196.1"
                     /translation="MSKPYYVKFQVPKDLVTAIYEAVRVSKESGKVRKGTNETTKAIE
                     RGVCKLAVIAEDVEPPEVVAHLPIICEERNTPYVFVPSKQQLGESLGISVGSAAATII
                     DAGDSQHIVDEIINTLKNQNPKTDKQQQQQQQQ"
     gene            631..846
                     /locus_tag="VLA74_00420"
     CDS             631..846
                     /locus_tag="VLA74_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S28e"
                     /protein_id="HSF49197.1"
                     /translation="MSKTVDEKIVPAEVIQIVGRTGIAGEVIQVRVKVLDGKDKGRIL
                     TRNVKGAVRMNDILILRETEREARKIK"
     gene            916..1131
                     /locus_tag="VLA74_00425"
     CDS             916..1131
                     /locus_tag="VLA74_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24e"
                     /protein_id="HSF49198.1"
                     /translation="MSRTAASLRNCFFCGERIQSGTGIMLVKNDGSIQWTCSNKCKKN
                     LRILKRDPRKFKWTKKYVKGGLKGSKG"
     gene            1223..1639
                     /gene="ndk"
                     /locus_tag="VLA74_00430"
     CDS             1223..1639
                     /gene="ndk"
                     /locus_tag="VLA74_00430"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HSF49199.1"
                     /translation="MSEQTLIVIKPDAFSRKLTGKILARFEDKGFVIKQLKTFNFTKE
                     RAEEFYSAHKNKPFFDDLVAFISSSTVVSCILEGENAINTVRLMIGSTRSFDAQPGTI
                     RGDYGLGVTDNIIHASDSYESFIKESQVIFDSSIPK"
     gene            1636..3489
                     /gene="infB"
                     /locus_tag="VLA74_00435"
     CDS             1636..3489
                     /gene="infB"
                     /locus_tag="VLA74_00435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00491.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HSF49200.1"
                     /translation="MNLRQPVVVVLGHVDSGKTSLLDKIRGTGVQAREAGGITQHIGA
                     SFFPIETIKKITGVLYEKLAKADEKIPGLLFIDTPGHEVFANLRSRGGSAADIAIVVA
                     DVNKGFEPQTLESIEILKKRKVPFVVALNKIDMISGWRTLGVAGKKSSKKTSVSTRYS
                     NKDIKLPFITEEIKDQDANILTQLDEKIYTVVGSLSRLGYTSEAFWRVKEFDKELAIV
                     PISAVTGVGIPELLTVLVGLTQQYMKKRLERRSDQVRGIVLEVNEEPGLGQSANIILL
                     DGTLRQGDMVMVSKRDEIVVTKLKALLLPKLLDEMRDPRDKFRSVDEVVSAAGLKIVS
                     PDLDGVLAGTPIYVVNSKSEEETIRSLIESEVKGTFISNTDSNGVILKCDTLGSLEAI
                     IDMLKKEHIPIQTADIGNITRRDVLASYAVKEKDRYVGVILGFNVKVLEDATKEAFER
                     NVTIFNENIIYNLIRSYTDWVQYQRDHADSIIFNEIPPICKFQFMKGFVFRRNDPAVF
                     GAEILVGKLRQKVNVINEDGAKIGTIHQIQDKGKNIEEATKGMQVAVSIRGPTIGRQI
                     NEGELFLTDLSSKQAKLLLEGFEHRLNEEEKDIFETILRLKRAKDQAFGYL"
     gene            complement(3836..4045)
                     /locus_tag="VLA74_00440"
     CDS             complement(3836..4045)
                     /locus_tag="VLA74_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49201.1"
                     /translation="MSDNLDEIKEEEFRILYINELRSKHSLYEDKLEEEFRRVKQQIM
                     KTPGRKGEQIKLEEINNEILRRLSK"
     gene            4656..4859
                     /locus_tag="VLA74_00445"
     CDS             4656..4859
                     /locus_tag="VLA74_00445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49202.1"
                     /translation="MSSLIIESYQNSTVNTILDDIGKKYTIDTSKDRLSKDASIQEIK
                     FKYRTYSECVKMLYKKVQDLQEI"
     gene            complement(4856..5131)
                     /locus_tag="VLA74_00450"
     CDS             complement(4856..5131)
                     /locus_tag="VLA74_00450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49203.1"
                     /translation="MKVTLYRYIFIFSEKIYLYYSINSITVIRIIQNILSVRHLIKWS
                     YIITCKKCGHISMEKLSKEKAKELLHAHIGGSQNCTSGDIELMKVRT"
     gene            5522..5686
                     /locus_tag="VLA74_00455"
     CDS             5522..5686
                     /locus_tag="VLA74_00455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49204.1"
                     /translation="MLKCKTCGQVFPGLYVPEGSTDSYKSANTNTETLYTCSRGHQNK
                     YNSPDYTDLS"
     gene            5690..>5880
                     /locus_tag="VLA74_00460"
     CDS             5690..>5880
                     /locus_tag="VLA74_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49205.1"
                     /translation="MSLTKVVLVSYPDDFRLQEAKNLVESSFAEKKYKIVKVVTHKFL
                     NHSKFGLGSGKADEIKNLV"
BASE COUNT         2114 a          849 c         1042 g         1875 t
ORIGIN      
        1 ttcgaattag tttataaaaa aggaattaat gtctagcgga aaagaatctg atttatagaa
       61 aatgcaatga atgatttaaa aaatatcaaa tgttttgtat ctataaacga ttcctcaaaa
      121 gaattctgaa gtgaggtaac gttttaatat gctatatttt gtagaaagat ggatgatccc
      181 aaagggtgat attaactaat gagtaaacca tattatgtta aatttcaagt tccaaaggat
      241 ttagtaacag ctatttacga ggcagttaga gtttctaaag aaagtggaaa agtaagaaaa
      301 ggaacaaatg aaacaactaa agctatcgaa cgtggggtat gcaaattggc cgtgatagca
      361 gaggatgtcg aaccccccga agttgttgct catcttccaa ttatatgtga agaaagaaac
      421 acaccttatg tttttgtccc aagtaaacag caactaggtg aatctcttgg catttctgta
      481 ggctctgctg cagctacgat aatagatgcg ggtgattctc aacatattgt tgacgaaata
      541 attaacactt taaagaatca gaatcccaaa acagataaac aacaacaaca acagcaacaa
      601 caatagttag ttctgaggtg aaaatgttct atgagtaaga ctgtggatga aaagatagtt
      661 cctgccgaag ttattcagat tgttggtagg acgggaattg ctggagaggt tattcaggtc
      721 agagtaaagg tattagacgg caaagacaag ggaaggatac tcacgagaaa tgtaaaaggc
      781 gcagttcgca tgaatgatat tcttatactc cgagaaaccg aacgggaggc aagaaagatc
      841 aagtaataac aaaagtggtg gaaccgtaat gttattaaat tataaacagc tacattgtgt
      901 tttaggtaac taaaaatgag tagaacagct gcatctttac gtaattgttt cttctgtggt
      961 gaacgtattc agtctggaac tggtattatg ctagtcaaaa atgatggctc cattcaatgg
     1021 acctgttcaa ataaatgtaa aaaaaatctt agaattctaa aaagagaccc taggaaattc
     1081 aaatggacaa agaaatacgt aaaaggcgga ttaaaaggtt ctaaaggata agcgtatagc
     1141 taaataaata attataatca ttaaaggaaa aaataaagct tagtttcgaa aaaaaaaata
     1201 atcaaatagg gagatgaatt tgatgtctga acaaacgtta attgttatta aaccagatgc
     1261 gttttccaga aaattgactg gaaaaatcct ggcacgattt gaagataagg gttttgttat
     1321 aaagcaacta aaaaccttta attttacaaa agagagagca gaagagtttt attctgcaca
     1381 caaaaataaa ccatttttcg acgaccttgt cgcttttatt tcatcatcta cggtggtatc
     1441 ttgcattttg gaaggtgaaa acgctataaa cactgttaga cttatgatcg gttctactag
     1501 atcttttgac gcccaaccag gtactattcg tggcgattat ggtctgggag taactgataa
     1561 tattatacac gcgtcagact cttatgaaag cttcataaaa gagtcacaag tgatttttga
     1621 tagtagtata cctaagtgaa tttaaggcag cccgttgttg tagttttggg tcacgtagac
     1681 tcaggaaaga cctcattgct agataaaatt agaggaacag gagtccaagc tagagaggca
     1741 ggtggaatca cacaacacat cggtgcgagt ttttttccaa ttgaaacgat aaaaaaaata
     1801 acgggagttc tatatgagaa acttgccaaa gcagatgaaa agattcctgg tctattattt
     1861 atcgatactc ctggacatga agtctttgca aatcttcgaa gcagaggagg ttctgctgca
     1921 gatatagcta ttgttgtggc agatgtgaat aaaggatttg aacctcaaac gcttgaaagt
     1981 atcgagattt taaagaaaag aaaagttcca ttcgttgtag cgctaaataa aatcgacatg
     2041 atctcaggat ggagaacatt aggagtggca ggaaaaaaaa gttcaaaaaa aacaagcgtt
     2101 agcacccgtt atagtaataa agatatcaaa ttaccattca ttactgaaga gataaaagat
     2161 caagacgcga acattcttac acaattagat gaaaaaattt acacagttgt gggatctctt
     2221 tcgagattag gatatacctc tgaagcattc tggagagtaa aagagtttga taaggaactt
     2281 gcgatagttc ctataagtgc tgttactggg gttgggatac cagaactctt gactgtatta
     2341 gttggactaa cccagcaata tatgaaaaaa agattagaac gacgatctga tcaagtaagg
     2401 ggaatagttc ttgaagtcaa cgaagaacca ggcttaggac aatctgccaa cataattctg
     2461 ttggatggta ctttaagaca gggtgacatg gttatggttt ctaaacgaga tgagattgta
     2521 gtaacaaaat taaaagcatt acttcttcca aaactattag atgaaatgag ggacccccgt
     2581 gataaattta gatcggtcga tgaagttgtc tcagcggctg gattaaaaat tgtctctccc
     2641 gaccttgatg gagttcttgc aggtactcct atatatgttg taaatagtaa aagcgaggag
     2701 gaaacaataa ggtcattaat agaatctgag gtcaagggaa cattcattag caatacagac
     2761 tctaatggcg tgattttaaa atgcgatacg cttggttctc ttgaagctat aattgatatg
     2821 cttaaaaagg aacatattcc aatccagact gcagatattg gtaatattac aaggagggat
     2881 gttcttgcat cctatgcggt taaagaaaag gatcgatatg tcggtgtgat cttggggttc
     2941 aatgttaaag ttctggaaga tgcgactaag gaggcttttg aaagaaatgt taccattttt
     3001 aatgaaaata taatatataa tttaattagg tcgtatactg actgggttca gtaccagcga
     3061 gatcatgctg attcaataat atttaatgaa ataccaccaa tatgtaaatt ccaattcatg
     3121 aaaggatttg tattccgacg aaacgatcct gcagtatttg gtgctgaaat tctcgttggg
     3181 aaattaaggc aaaaagttaa cgttataaac gaagatggtg caaaaatcgg aacgattcac
     3241 caaatccaag ataagggaaa gaatattgaa gaggctacaa agggaatgca ggttgcagtt
     3301 tcgattcgtg gacctactat aggaagacag ataaacgaag gtgaattatt tttaactgat
     3361 ctttcaagta aacaggccaa acttttgtta gaggggtttg aacacaggtt gaacgaagag
     3421 gaaaaggata tctttgaaac cattcttcga ctcaaaagag caaaagatca ggcttttggt
     3481 tatctttaat ataataacta atcgtacaca atataattaa ctgatgtaaa tgatgtattt
     3541 atttaatggt gatcgaaatt aaattgaatt ttatattacg gtaatattcc tgtatcacta
     3601 ttattatcaa tctccaaata aatattaaaa gaaagtaaga aaaacatcat ttgcagaata
     3661 gttgaaggta cgaaagatcc agtaatttac tagaatgtta aaaaaaattt aaatgttatt
     3721 ggcagaactt aaatttcatt atgttgtatc agagaatcaa ataccattga tatagttgta
     3781 ttttgttatg ttttatttat acccagatgt taatgttaga attttgtgca ctcaattatt
     3841 tagacaacct tctaagaatc tcattattta tttcttccag ttttatttgt tcaccctttc
     3901 gtcctggagt tttcatgatt tgttgtttaa cccttctaaa ttcttcttct aatttatctt
     3961 catacaaaga gtgtttgcta cgtaattcgt taatatacaa tattctaaat tcttcttctt
     4021 ttatttcgtc taaattgtct gacataatat atatattata tttgatacta tatttaaagt
     4081 atctattttt tagaaattta tttattttat cttgattaat cttataagat ttacaaaggc
     4141 acttataaat aattcaattt taacttttga tccatttctt ctataacttt tttttatttt
     4201 tatcctactt gcctatatta tatttcccca ctttattata attgaagtag ttgtaaaagt
     4261 aattatctat acaaatcaca gcagagttgt tacaatttgt ctagtaattt attatcaata
     4321 tatcaaatta gcatcccgat actattgata ttatcaagcc gttcgacgaa tataattttt
     4381 ctttatatat aatctaaatt gattgtatga gacaaacata aaatctgatg atttgacctt
     4441 ttggataata ctagagcttt gttaacttaa gggagggaat ctactagcca aaaataaaaa
     4501 attcatttaa aatcgagtaa taaacatatt taaaaataat atctaattta ttatttcaac
     4561 aggttaccat agtcatccca aggatatgat taaaaatata aatataaatt gaaataaata
     4621 cagtaatata tatacaatag aacaaattat atattatgtc aagtcttatc attgaatcat
     4681 atcaaaattc aactgtaaac acaatcctgg atgatattgg taaaaaatac accattgata
     4741 cttcaaaaga tcgactaagc aaagatgcat ctattcaaga aatcaaattt aagtatagga
     4801 cttactctga atgtgtaaaa atgttgtata aaaaagtaca agatttgcaa gaaatttagg
     4861 tccgtacctt cattagttca atgtcacctg atgtacagtt ttgtgaaccg ccaatgtgag
     4921 catgtaaaag ttcttttgct ttttccttag atagcttttc catagaaata tggccacatt
     4981 ttttacatgt aataatataa ctccacttaa tcaaatgtct aacactaaga atgttttgta
     5041 ttatccttat aactgttata gaattaatag aataatagag ataaattttc tctgaaaata
     5101 tgaaaatata tctgtatagt gttactttca ttttctcatt tagccttctt cagctgtcct
     5161 ctccagacat tctctttaca acaccgtcca ctagaatata accattatat agaacttgaa
     5221 gcaggaatat tctttattct acccataaat tctaacctcc tattaatcta agcgattcgt
     5281 tttttagaat attatttcaa taaagcaagc aagaaaatat cttgagattc atctcttcct
     5341 ccctggtagg ttcgtctgtt aagtatattt tattagaaag cacggcttat tgatgcttct
     5401 attttacttc agctttagtg tatttaattt actattttca ggtaatgtat ctaaatataa
     5461 gtataataat gtcgaacgcc tattataata tagaggatag cgaattaaaa tgccgatgct
     5521 tatgttaaaa tgtaaaacct gcggtcaggt ttttccagga ctttatgttc ctgagggaag
     5581 tactgattct tacaaatcag ctaatacaaa tactgagact ctttatacct gttcaagggg
     5641 acatcagaat aaatataatt ccccagatta tacggatttg tcgtaatttt tgagccttac
     5701 caaagtagta ctagtatcat atccagatga ttttagatta caagaggcta aaaatctagt
     5761 agaatcatca tttgcagaaa aaaaatataa aattgtgaaa gtggttactc ataaattttt
     5821 aaaccattct aaatttggtc ttggttctgg taaagcagat gaaattaaaa atttagtcaa
//
LOCUS       DATIAS010000021         2082 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_3403, whole genome shotgun sequence.
ACCESSION   DATIAS010000021 DATIAS010000000
VERSION     DATIAS010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3403"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..737)
                     /locus_tag="VLA74_00465"
     CDS             complement(135..737)
                     /locus_tag="VLA74_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49206.1"
                     /translation="MNSNIESENNNNNCDNNKLSIIWTNRFMYAVIIQGAIIVGLTIF
                     LVFSQISFLKPEISRVIAAGGAGTWFTFGYIMYVVVGVIGVAVSALFYYYVEQILEKP
                     YNKRLTKLLAWTHILLMNLGTTLAMGLLMYAGYIGGAGMLPQNVGGKGFNAGQAHEIL
                     ALFIEPISFAIMILLLGIILGGLGFLLTYNRKGTKSRQII"
     gene            849..1946
                     /locus_tag="VLA74_00470"
     CDS             849..1946
                     /locus_tag="VLA74_00470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49207.1"
                     /translation="MKITNVYYIVLSIIVIFPTSMAWAEEKTNLNNSSLVPSSSISLN
                     RTNVDFATNIEFIKGHLSAAISNKEIGNNELAQTHTFHPIHEIYTLIRDQISSADTEL
                     NNTLINSLNNLTSIVFTSTSAEFTDLASSIKSLLDKAIIKTVPENEIADIKFNMSTLI
                     NLLKTAESEYGIGIENGTITNIAEYQDAQGFVSSANELFNKTINNLNEAMTNKFTEIK
                     DSFDQLNTSMSNKEDAKQISTIVNKVTNAIPTILNVQAKDLAILVSTEKESTELIDNI
                     RNLLGQSIEKIKNGDYQIAESLVIEAYLDNFEFLEGEIAKHDESLLKDTEVLLREQLR
                     DLIQGKASLDDIQKMVDNINTKLNEIEKLLQ"
BASE COUNT          807 a          305 c          278 g          692 t
ORIGIN      
        1 tttttttgtt atcgtataac ttattatatc atttttattc atgtaatatg aaaaagagac
       61 taaaagattt aattttttat taatgtaaaa cattcaatta aaataagatg aataataaat
      121 atagtgaata ttctttatat tatttgtctt gattttgtac cttttctatt gtatgtcaat
      181 agaaaaccta atcctcctag tattatcccc aaaagtaata tcataattgc aaaagatatg
      241 ggttcaatga aaagagccaa tatttcgtgt gcttgtccag cattaaatcc ttttcctcca
      301 acattttgtg gaagcattcc tgctccgcct atatatccag catacattaa cagacccatg
      361 gccaatgttg ttccaagatt cataagcaat atatgtgtcc aagctagtag tttagttagg
      421 cgtttgttat agggcttttc taatatctgt tcaacataat agtagaataa agcagagaca
      481 gcaactccta ttaccccaac aaccacatac ataatataac caaaagtaaa ccaagtcccc
      541 gcacctccag ctgcaattac tcttgaaatt tctggtttta gaaaagatat ttgactaaaa
      601 acaagaaaaa ttgttaaacc aacaatgatt gctccttgaa tgatgacagc atacataaat
      661 cgattagtcc atattataga taatttgtta ttatcacagt tattgttatt attttcgctt
      721 tctatatttg aattcatttt tttcctcttt atttatgtat acttccctac aatatagaaa
      781 tagattatgg ttataatgtt gcagaaaaaa caatatattt aaatatagtt tgagacgcct
      841 ggcttattgt gaaaataaca aatgtttatt atattgtact atcaattatt gtcatatttc
      901 ctacatcaat ggcatgggca gaagaaaaaa ctaatctcaa taattcttct ttagtaccat
      961 catcttcaat ttcattaaac agaacaaatg ttgattttgc tacaaatatt gaatttataa
     1021 aggggcattt atctgctgca atttcaaata aagaaatagg aaataatgaa cttgcacaga
     1081 cacatacatt tcatccaata catgaaatat atacattgat tagagatcaa atatcatctg
     1141 cagatactga attaaataat acattaataa attcattaaa caatctaaca tccatagttt
     1201 ttacatccac atctgctgaa tttactgatt tggcgtcctc tatcaaaagt ttattagata
     1261 aagcaataat taagactgta ccagaaaatg agattgctga tataaaattc aatatgagta
     1321 ctttgattaa tttacttaaa actgctgaat cagaatatgg tataggaata gaaaatggta
     1381 caattacaaa tatagcagag tatcaagatg ctcaagggtt cgtttcatct gccaacgaac
     1441 tgttcaataa aacaattaac aatctaaatg aagcaatgac taataaattt acagaaatta
     1501 aagattcatt tgatcaatta aatacatcta tgagcaataa agaagatgca aaacagattt
     1561 ccacaatagt aaataaggta acaaatgcta taccaactat actaaatgta caggccaagg
     1621 atcttgcaat tcttgtttca acagagaaag aatcaaccga attaatagat aatattcgta
     1681 atctattagg ccaatctatt gaaaagataa agaatggcga ttatcagatt gctgaatctt
     1741 tagtaataga agcatattta gataactttg aatttttaga gggcgaaata gcaaaacacg
     1801 atgaatcact tttgaaggat actgaagttc tattacgaga acaactacgt gacctcatac
     1861 aaggaaaagc cagtctagat gatatacaaa aaatggtaga taatataaat actaaattaa
     1921 atgaaataga aaaattatta caataaaatt tttttaattt tttaaggtat ttaaattaaa
     1981 ttgatcgagt gatccagcta tatattccta gaaattaata tcaactagaa tttatgatac
     2041 ttgggttttt ctaaggatta taaaaatcaa gagaatagaa ta
//
LOCUS       DATIAS010000022         5043 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1229699, whole genome shotgun sequence.
ACCESSION   DATIAS010000022 DATIAS010000000
VERSION     DATIAS010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5043
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1229699"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VLA74_00475"
     CDS             <1..739
                     /locus_tag="VLA74_00475"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSF49208.1"
                     /translation="IQKFDKNGKFLLKFGKRGNGPGEFLQPESIAIDKNDNVFVVDYV
                     TSHIQKFDNNGNFITMWGSKGNGTNQFMKPWGIGVDSKGYVYVGDQENPVIQKFDNNG
                     NFIKKWGSYGPKAAQFVHIHDITLDSADNVYVTDGRDNSRVEKFDSNGNFITMWGSKG
                     SDKGQFIEDHGIAVDKSGYVYVADTRNVRVQKFDSSGNFITMWGSLGCKNDQFLIPHD
                     ITISPDGNIYVSDSGNVHFRQNYMCSP"
     gene            1874..3238
                     /locus_tag="VLA74_00480"
     CDS             1874..3238
                     /locus_tag="VLA74_00480"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSF49209.1"
                     /translation="MNNTIEYPPGPKDLFPYTIARKFLRDPLKTLTNLSETYGDISHF
                     KFGKQDVYFLNNPNYIEEVLVTNYKNFIKSRGLQVSKRLLGTGLLTSEGIYHDKQRHL
                     IQPTFSLKRIRSYADVMIKKTLNSCEKWNKGSILDIHKEMTQLTLEIICKTVLSYDIK
                     PEDDEVGDSLLTCMEYFNRLLMPFGELIEKIPILPINKGFQKAKGNLDSIVFRIIDEH
                     RVKLEKNEQKDKDLLFTLLQAQDDDSGIEKMTDQQLRDEVMTIFLAGHETTANALTWT
                     FYLLSEHPIIDARLQEEIHSIFSDKIDLSFNDISKLGYTAKVLTESMRLYPPAWALGR
                     QAINDCKIGKYIIRSGSIILMSQYVMHRNQNYFPQPNTFCPDRWTDEFKKTLPRFSYF
                     PFGGGIRGCVGEPFAWMEAIIITAVINRLWKMNSTSSNKVALKPLITLRPKYGMHLKI
                     TRRE"
     gene            complement(3494..4729)
                     /locus_tag="VLA74_00485"
     CDS             complement(3494..4729)
                     /locus_tag="VLA74_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49210.1"
                     /translation="MKIYKTKKNFQYLVAASLVFILAISLSCILEFKNTYSYPENGEK
                     LMGVNMKGKYTSLNYERFPNVTIMNGYYDDSFKLIKSMGLNHVRYVLYWEAYENNQKL
                     FLQELENVASLADKWGLNIIYDNHQFHTSSWLDENRGTGFPHFLFDKNIYLYNSETKS
                     SGNATKLWWTNWWDRNIVHENNKTDGWILQANFLKNITRLLDSHNSTVGYEILNEPQI
                     FSQDQWSKIGKYYAFMINEIRKQTNKIVVIDMTIPIKFDDAAINLTSENMVKIIPKDD
                     KSIFKISLYGIPMNNNYQEKKLELLENVSKLAQVPLYVGEWNNVLRDKTSTTDKTDTS
                     KINAAKSDLTQNESDFFVDKFKKLNIRGWAFWNWNYIDTPPKNFNLIHLTKDGDIVPT
                     KYFYILKNSVEKLYNNPVF"
     gene            complement(4853..>5043)
                     /locus_tag="VLA74_00490"
     CDS             complement(4853..>5043)
                     /locus_tag="VLA74_00490"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HSF49211.1"
                     /translation="ITINGNNQNSLAVSGTINNLDLQGTLKGRNISDLITLMESGNTY
                     VNVHSEPYPDGEIRGQIT"
BASE COUNT         1694 a          785 c          813 g         1751 t
ORIGIN      
        1 tattcagaaa tttgataaaa atggtaaatt cttgttgaaa tttggtaaga gaggcaatgg
       61 acctggtgaa tttttacagc cagaaagtat tgctatagat aagaatgata atgtatttgt
      121 agttgattat gttacttcac atatccaaaa gtttgacaat aatggtaact ttattacaat
      181 gtggggatct aaaggaaatg gaacaaatca attcatgaaa ccatggggaa taggagtcga
      241 ttctaaaggt tatgtttatg taggtgatca ggaaaatcca gtcatccaaa aatttgataa
      301 caatggaaat tttattaaga aatggggttc gtatggaccc aaagcagcac aatttgttca
      361 tattcatgat attaccttgg attcagcgga taatgtctat gtaactgatg gcagagataa
      421 ttctagagtt gaaaaatttg atagtaacgg taacttcatt actatgtggg gatctaaagg
      481 aagtgataag ggtcaattca tagaagacca tgggatagca gtagataaat ctggatatgt
      541 atatgtagca gatacaagaa atgtaagagt acaaaagttt gacagcagtg gtaacttcat
      601 tacaatgtgg ggatcccttg gatgtaaaaa tgaccaattt ttaatacccc atgatataac
      661 aattagtcca gatggaaaca tatatgtaag tgatagtgga aatgtacatt tcagacaaaa
      721 ttatatgtgc agtccttagt cataggttat taacaggatc attttcattc agatacggag
      781 ccctctttgg aagctatttt atagtaaata gtctttgtat acatttacat attcttatgt
      841 aattttgagt atatcaaata aaggattaca ttatacaagt acagtccttt tccacctatt
      901 ttttattatg taacttgaga ttttcatgat cgcttatctt aataggtcga atttattcgg
      961 ttatagaaag catataactc ttcccattca cccttatcac ggatttgtat cgagaatctc
     1021 tttcttccat cataatgtct gatttttttt cttaacctgc aaaaatgaat atcttgttta
     1081 taccttggtt gtattatatt atgtttcatc taaagtacca gcaccacttt tttgagactt
     1141 tatgctactt gtttgtagtt ctttacctgt ttcttccatt gatcatattt atgtgcatat
     1201 tcgagttcta tttttggttt ttgcatctaa tacccacata ttttagtgtc ttttgatgtt
     1261 agaaattaat ttcgatatat aaagttcttc agtgagacaa tttccagtga cctgagagtc
     1321 aaactctttc ttacacgacc aaaaatggtt ggttcattag aagtacaaaa atataatctc
     1381 tctattttca tttgttataa ggacttttta ctacctgtgt gtttcattta ccaagtcact
     1441 agtttttgtc ctcagcttga taggtatctc tacagactta attaatactc acatactgtt
     1501 gcttctctaa atgtttaaaa gttctaccat tatttgtatt gatcattaga tttaacctcc
     1561 gataatgtcg actgcctgta atattttttc atcaatcggt agtatttttt tatcaataac
     1621 cttagaccct tcttctttgc tgaagggaga ttgagatttt tagaaccaag taaatataat
     1681 tatgatgttt tgatgtaaga tttatctatc caagaatcta gacattgcaa ttagtatggt
     1741 gattataaag atggaatcaa tttggccacc atgcttagac tcttttagca gcattctgaa
     1801 catcccggaa cgagattgtc tgcctagtac ccaagataaa acaatatatg aatacaaaac
     1861 agaagtacat tgaatgaata atactattga atatccacca ggtcccaaag atttatttcc
     1921 atataccatt gctcggaaat ttctacgaga tcctcttaaa acattaacta acttatctga
     1981 aacttatggt gacatatctc actttaaatt tggtaaacag gatgtctatt tcctgaataa
     2041 tcctaattac attgaagaag tattagtaac taattacaag aattttatta aaagtagagg
     2101 attgcaggta tcaaaacgtc tgttgggcac aggtttgctt actagtgagg gtatttatca
     2161 tgataaacaa cgacacttaa tacaaccaac attttccctc aagagaatca gatcatacgc
     2221 tgacgtgatg ataaaaaaaa ctctaaatag ctgtgaaaag tggaataagg gatcaatact
     2281 agatatacat aaagagatga cccaacttac cttggaaatt atttgtaaaa cagtattaag
     2341 ttatgatatt aaaccggagg acgatgaagt aggagattca cttctaactt gtatggagta
     2401 tttcaataga cttttaatgc catttggtga attaattgaa aaaatcccaa ttttgcctat
     2461 caataaggga tttcaaaaag ccaaaggaaa tctagattca atagttttca ggataatcga
     2521 cgaacataga gtaaaattag agaaaaatga gcaaaaagat aaggatttat tatttactct
     2581 tctacaggca caagacgatg attcgggtat tgaaaagatg actgaccaac aattaagaga
     2641 tgaagtaatg accatatttt tggcaggaca tgaaacaact gcaaatgcgc ttacgtggac
     2701 attttatttg ttatccgaac atcctatcat cgatgcaaga cttcaagaag agattcattc
     2761 gatttttagc gacaaaatag atttatcatt taatgatatt tcgaaactgg gatatactgc
     2821 aaaagtactg acagagtcta tgagacttta cccacctgca tgggctttag gacgtcaagc
     2881 gattaatgat tgcaaaattg gaaaatacat tattaggtcg ggttctataa tcttgatgag
     2941 ccaatatgta atgcatcgta atcaaaatta ttttccacag cctaacacgt tttgtcctga
     3001 tcgttggact gatgaattta agaaaaccct gccaagattt agctattttc cctttggtgg
     3061 tggaattaga ggctgcgtcg gagaaccatt cgcatggatg gaagcaatta tcatcacagc
     3121 tgtcataaac agactgtgga agatgaatag tacatcatca aataaggtcg ctttgaaacc
     3181 attgataaca ttgcgaccaa agtacggaat gcatctgaaa ataaccagaa gggaataaaa
     3241 gaaatataat tttatcatac acaaaagtac agtgtatcta cgaataagca atatgcaaag
     3301 aggatcattc aggtcaatca caatgcacaa acagtgtcta acagatctgg ataagaaaat
     3361 ttaggttttt aaacgaacaa ttcgtggata tattttaaaa tattcgattt ttatctcaat
     3421 aacaaatcca agtcaagacg gtagctgaaa aaatttaaaa aaagaggaaa tactttttat
     3481 acactacatc aaactaaaaa acaggattat tatataattt ttcaacagaa ttttttaaga
     3541 tataaaaata ttttgttggc actatatctc cgtcctttgt taaatgaatc aaattaaaat
     3601 tctttggggg tgtatcaata taattccaat tccaaaacgc ccaacctcgt atatttaatt
     3661 ttttgaattt atctacaaaa aaatctgatt cattttgtgt caagtcactt ttagcagcat
     3721 ttattttact ggtatctgtt ttatctgtgg tactagtttt atctcttaac acgttgttcc
     3781 attctcctac gtatagtgga acttgtgcta atttagagac attctctagt agttctaact
     3841 ttttttcttg ataattatta ttcattggga taccatacag tgatatttta aaaatcgact
     3901 tgtcatcttt tgggataatt tttaccatat tttcagaggt aagattaata gctgcatcgt
     3961 caaactttat cggaatagtc atatcgatta ctactatttt gttcgtctgt ttcctgatct
     4021 cattaatcat aaaagcgtaa tattttccaa tttttgacca ctgatcttgt gaaaaaattt
     4081 gcggttcatt aagtatctca tatccaactg tgctattatg actatcaagt aatctggtaa
     4141 tgtttttcag gaaattagcc tgaagaatcc acccgtctgt tttattattc tcgtgcacta
     4201 tatttctatc ccaccaattc gtccaccata gtttagtggc attacctgag ctctttgttt
     4261 ctgaattgta gagataaata tttttatcaa agaggaaatg cgggaatcca gtacctctat
     4321 tttcatcaag ccaacttgag gtatgaaatt gatgattatc atatattata tttaatcccc
     4381 atttgtctgc aagagatgcc acattttcta attcttgtaa aaataatttc tgattatttt
     4441 catatgcttc ccaatataac acgtatctaa catgattcaa tcccatactt ttgataagct
     4501 tgaagctatc atcataatag ccattcataa tagtcacatt aggaaatctt tcgtaattca
     4561 aactagtata ttttcctttc atgtttactc ccataagttt ttcaccattt tcaggatatg
     4621 agtatgtatt tttaaattct aaaatgcaag ataaagaaat tgctagtata aaaacaagtg
     4681 acgctgctac tagatattgg aaattttttt tagtcttata aattttcaaa atatgcatgt
     4741 tatacttttt taaataataa atgttattaa taaaaattat taacgactat cgtacattga
     4801 cagcataaat agttgaataa agtttgacaa ttttaaaaaa atttgaagta tcttatgtta
     4861 tttgacccct gatttcaccg tcaggataag gctcgctgtg aacatttacg taggtatttc
     4921 cactttccat taaagtaatc aggtctgaaa tattccttcc tttaagggtt ccttgcaaat
     4981 ccaggttatt gattgttcca cttacggcaa gagaattttg gttgtttcca ttaattgtta
     5041 tag
//
LOCUS       DATIAS010000023         2894 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_140234, whole genome shotgun sequence.
ACCESSION   DATIAS010000023 DATIAS010000000
VERSION     DATIAS010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2894
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140234"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="VLA74_00495"
     CDS             <1..420
                     /locus_tag="VLA74_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49212.1"
                     /translation="MTTILEDNRMTREEIKSKVAEFKTNHPKYATIVQEIPNLDLKET
                     FRAYFVAGVLERILKAHARNLVEEKITGKSSSPLEEYMTEEEIKTKGSEIKAKHPKFA
                     TIVQEMSNLDLKQTVKGYIAAEILQRLLKVHGRNLVE"
     gene            834..1376
                     /locus_tag="VLA74_00500"
     CDS             834..1376
                     /locus_tag="VLA74_00500"
                     /inference="COORDINATES: protein motif:HMM:NF042555.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HSF49213.1"
                     /translation="MNNHLILNMKAEQFSKNILELDPGIRFAGVVEKSGHMYGGGMRE
                     GLEDYLKGRNPELNLAQTAYVVDLRRMFSPELGALKCVFFDYDKVKIFNIPVKDHVLV
                     LSANKGTNTDYIIEKVEQYVKSVEAELSLYPPSNIIDSEKKEMLRNLYESSIPDDMIA
                     DQLDLDINTVRSLIQEIASK"
     gene            complement(1704..2078)
                     /locus_tag="VLA74_00505"
     CDS             complement(1704..2078)
                     /locus_tag="VLA74_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49214.1"
                     /translation="MSSVGIMTLFSSVQISILLILPYPPFGLSTITVMPMASFLLIIG
                     LLFSAQSLSFDRQLLSELGKYIKNRPNLFLQNIGTIEWTKNVEKIVQQIENKQPIDKE
                     LRFSALTKIDIQNYIYKVLDEL"
     gene            complement(2232..2588)
                     /locus_tag="VLA74_00510"
     CDS             complement(2232..2588)
                     /locus_tag="VLA74_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49215.1"
                     /translation="MSQAEWFTTYLQYENLKDMLSVVLYTSQSFMTITPLLYNITYQN
                     KEILFIHTGIVGGVISHYHVIQAKPNKRFIELNKMTGDFNFIDNIGNNTQSIYIPIVK
                     LIKSTLRFPIDDLDEV"
BASE COUNT         1043 a          395 c          454 g         1002 t
ORIGIN      
        1 atgacgacca ttttagaaga taatagaatg acaagagaag aaattaagtc aaaagtagca
       61 gaatttaaaa caaaccatcc aaagtatgct acaattgttc aagaaattcc taatctagac
      121 ctgaaagaaa ctttcagagc ttattttgta gcgggagttt tagagagaat actaaaagcc
      181 catgccagaa atctagttga ggaaaaaata actggtaaga gtagttcacc gttagaggaa
      241 tatatgacag aagaagaaat taagacaaaa ggatcagaaa tcaaggcaaa acatccaaaa
      301 tttgctacaa ttgttcaaga aatgtcgaat cttgatctca aacaaactgt taaaggatat
      361 attgctgctg agattttaca aagattatta aaagtccacg gcagaaatct agttgaatag
      421 aaaataatgt aacaatagtg ttacattatt ttttaattcc taaacatcat taatatattt
      481 ctaatcagat tttctctttt tactaaaaca ttggactctt atttttgcac cgatatcggt
      541 gttactcccg acgggcccgt agttttcttg gttcactatc acaaatttac ttgaattaca
      601 ttaatgaata ctttttttac agtaaatagt aattcatgtg tcattactat gtatagggct
      661 aagtatttca gcagttagga gagtaaaatt catgtaaaaa tgaaattatg aatccatcgt
      721 cattcctaca aacgtgttct taaatatgtt actttctaat ttggatttaa cggatacctt
      781 cataattagt taatacaaaa acaactgatg cagccagtac agaaagacta aatatgaaca
      841 atcacttaat attgaatatg aaagcagagc agttctcaaa aaatatttta gaactagatc
      901 ctggtattag atttgctggg gtagtggaaa agtcaggaca tatgtatgga ggaggtatga
      961 gagaaggcct tgaggattat cttaagggaa gaaatcctga attgaatttg gctcaaactg
     1021 cttatgttgt tgacttgaga agaatgtttt caccagaatt aggtgcttta aaatgtgttt
     1081 tttttgatta tgataaagta aagatattta acattccagt caaagatcat gtactggtac
     1141 tttcagcaaa caagggaacc aatacagact atattattga gaaggtcgaa caatatgtta
     1201 aatcagttga agcagagcta tcgctatatc caccttctaa tataatagac agtgaaaaga
     1261 aagaaatgtt gagaaatctt tatgaatcta gtattccgga tgatatgatt gctgatcagc
     1321 tagaccttga tatcaataca gtcagaagcc ttattcagga aatagccagt aagtaacctc
     1381 ctaaattccc ctctcttcct acaacttatt gatggccatg taaatactcg aaaagtctaa
     1441 atggttttta ctatatgaat atagtaatac gtcacttaag ataaggatat agttatggct
     1501 atttttaact tatctatgag gtttacaagt ttcgaatatt tgtattatgt acatttttct
     1561 tgactcataa taattccttt tttcaattag aattttcaat atctttttta tttatcttat
     1621 ccatataaga gtaagccttt gaccgatttc atcattgatt tttttgaaag ggatagacat
     1681 aatcattttt catttctttt actttagagt tcatcaagaa ctttataaat ataattttgt
     1741 atatctattt ttgtgagagc tgaaaatcta agttccttat caataggttg tttgttttca
     1801 atttgttgga caattttttc cacattcttt gtccattcta ttgttccaat attctgaaga
     1861 aataaatttg gtctattttt tatatatttt cctaattctg aaagtaattg tctgtcaaag
     1921 gaaagcgatt gagcagaaaa tagtaatcct attatcagta aaaacgacgc cataggcata
     1981 actgtaattg tagatagacc gaatggagga taaggtaaaa ttagcagaat agaaatttga
     2041 acactgctaa ataatgtcat tataccaact gatgacaata ttaaataata ttttatatga
     2101 atattttgta tattttttgc catgtaaata aacggtaatg caaaaaagaa acctccaata
     2161 tggttttaaa attagttggc catctcacag atgatctata acagaggtag atcttttgcc
     2221 aagtatatac attaaacttc atccaaatca tctatcggaa atctaagtgt agattttatc
     2281 aattttacta taggaatata aattgattga gtgttattac caatattatc tataaagttg
     2341 aagtctcctg tcattttatt taattcaata aacctcttat ttggtttagc ttgaattacg
     2401 tgataatgag aaataacgcc tccaactatt cctgtgtgaa taaacagtat ttctttattt
     2461 tgatatgtaa tattataaag taatggggtt atagtcataa aggattgcga tgtatagagt
     2521 acaacactta acatatcttt aagattttcg tattgtaaat atgttgtaaa ccattcagct
     2581 tgtgacatat aataagtaat gtcagaggtt tattttatac ttataataat cctcttcgtt
     2641 tctgaatttt ttatattatt tgataaatta ttatagaatt tgctgttttc ctatagactg
     2701 gtatatttac caaacctttt ccaaatacaa tataatggaa tgccggaaag cataatggaa
     2761 ttactaagaa aataaaaata aaaacaaaag aaattgaatt taggtctaat gaagggatag
     2821 caataatata ttatacttta atctaatttg catcacatgg tctgtacaat ctgtagaatg
     2881 aattgtcgac aaaa
//
LOCUS       DATIAS010000024         4056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_822630, whole genome shotgun sequence.
ACCESSION   DATIAS010000024 DATIAS010000000
VERSION     DATIAS010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4056
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_822630"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1211)
                     /locus_tag="VLA74_00515"
     CDS             complement(<1..1211)
                     /locus_tag="VLA74_00515"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSF49216.1"
                     /translation="MGDDEISQLIKKKGYGKSNKIALLLIPLILSAFTHTWNLLDFPN
                     LHIDEGHYMRKTMSTLQGEGLQPQDRYFAPYFGQILMAGIMGLIGYPDSFNPSPTENS
                     IETLYLVPRLIMSLFAVIDTFLVFKITERRYGIKIAFIASILFAVVPYGWALRRIFLE
                     SIQLPLLLTSILLVLYLKQPSDQAKNTLGFRNISLILLSGAFLGLSIFTKIPVFTMIP
                     LIGYLVYTNSANKKLKSLGLWFIPVFLIPLLWPAHAYSIGQLNIWIDDVLHQTQRESK
                     PLVNSFTSFAESDPVLFILGISGLIYAAIRKDFFILLFSIPFLLFLYWIDFVSSFHFI
                     PLMPVFSIAGAKLIVELSDRIPNLRFRKITPYAVTSAIAIFGLITIIILFSIDANSSV
                     IKAQAVAIDYML"
     gene            complement(1287..2090)
                     /locus_tag="VLA74_00520"
     CDS             complement(1287..2090)
                     /locus_tag="VLA74_00520"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HSF49217.1"
                     /translation="MQTNHHQDTYKTKSMFTLSIIIPTYNESGNIIKLLDKIKENLYH
                     NIFTEIIVVDDSSPDGTGNIVQNYIDNDDDYKKKKNSFKENINYSIHVLNRKEKNGLI
                     PAILEGVKFSQGDYILVMDADFSHPPEIIPQMVEKLLDDSNSIVIASRYIKNGAIVGW
                     PFKRRLISKGAAIIAKIGLHVNNVTDPMSGFFAVPRSLMENLQIDTKGYKILLEILVK
                     SKHMHIYEIPYTFTDRKSGKSKMGYNVIFDYIGSVWQLYNYGRKKYEKK"
     gene            2416..3537
                     /locus_tag="VLA74_00525"
     CDS             2416..3537
                     /locus_tag="VLA74_00525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49218.1"
                     /translation="MYYYNIHDIIKLKSEINLQELEYFASKEFSETDITLSVNSFSRD
                     PDMSKMRTKRKLIAKNFESGSKSYEIKYTEHFGRCGAQFQINVDWNKLQILINELISK
                     SKHVTYVNLIEPLLRFLFLSKGYILLHSACMSTPDGIGFFLSAPPDTGKTTTVIKCVK
                     KGFSFLSDDMTIISLPNQALCFPKSMTISAHTYKTAIDAQSVEQKQDGANESNDKKGM
                     RIRSVIHSKTGRSLMHKLADHNVPIFTINTIGQTKIKPPKYHIRDIIKEAKIQDKTMI
                     SFLFFLEKGEEGQNVEKVDKISTDDALKRAIENSDDAFLFPPYSDLIKYVRIEGKTAY
                     DLLEEEKKMMRELLSGIECNVLKSSGRRWTEMILQKFNQ"
     gene            complement(3689..>4056)
                     /locus_tag="VLA74_00530"
     CDS             complement(3689..>4056)
                     /locus_tag="VLA74_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HSF49219.1"
                     /translation="EALETLPICLAENAGMDPIDTMAELRAKQGKGIKWTGIDVRNAT
                     IADMYKLNILEPVVIKEQIIKSATEASCMLLRIDDVIASSKSKAPPGGMGGGMGGMGG
                     MGGMGGMGGMGGMGGMDME"
BASE COUNT         1433 a          645 c          651 g         1327 t
ORIGIN      
        1 agcatatagt ctatcgccac ggcctgcgct tttatgactg aagaattggc atcgatagag
       61 aaaagaatga ttatagtaat caacccaaat atcgctattg cagatgttac agcatatggt
      121 gttatttttc tgaatcttaa atttggaata cgatcggata attcgactat tagttttgca
      181 cctgctattg aaaataccgg catcaaagga ataaaatgaa aagaagacac aaaatcaatc
      241 caatataaaa atagcaaaaa tgggatacta aataacaaga tgaaaaaatc tttcctaata
      301 gccgcataga taagaccact aattcccaat atgaataaaa ctgggtccga ttctgcaaaa
      361 gatgtgaacg aatttacaag aggcttgctt tctctttgag tttggtgtaa cacatcatca
      421 atccagatat ttaattgacc tatagaatat gcatgtgctg gccataacaa gggaataaga
      481 aaaactggaa taaaccaaag tccaagactt tttagctttt tgttagcact atttgtatat
      541 acaagataac ctataagtgg aatcattgta aaaaccggaa tctttgtaaa tatagataaa
      601 cctaaaaatg cacctgaaag aagaattaaa gagatatttc tgaatcccaa tgtatttttc
      661 gcctggtcag atggctgttt caaataaagt actaggagaa tcgaagtcaa cagtaacggt
      721 aattgtatag attcgagaaa tattcttctt agtgcccaac cgtaaggtac aactgcaaaa
      781 agaatcgacg caataaatgc aattttgata ccatatcttc tttctgttat tttaaaaaca
      841 agaaatgtat ctatcactgc aaaaaggctc ataattaatc gtggaacgag ataaagagtt
      901 tcaatagaat tttcagtagg tgaaggattg aacgaatctg gatatccgat taatcccata
      961 ataccagcca tgagtatttg accaaaataa ggagcaaaat aacgatcctg tggttgaaga
     1021 ccttcgccct gtaaggtaga catggttttt ctcatgtaat gtccctcgtc aatatgcaaa
     1081 tttggaaagt caagtaaatt ccaagtgtgg gtaaaggcac ttaatattaa tggaataaga
     1141 agtaatgcaa tcttgttgct cttaccatat cctttctttt taatcagttg acttatttca
     1201 tcatcaccca acacaaataa ttttatgatt atatatactc aaaatgatat atatttgtca
     1261 catagtgaga ataaatgtaa tcagatttat ttcttttcgt atttttttct tccgtaatta
     1321 tataactgcc aaactgaacc aatataatca aaaataacat tataacccat cttactttta
     1381 cctgattttc tatccgtaaa tgtatatgga atttcgtaga tgtgcatatg ttttgattta
     1441 acgagaattt ctaataggat cttgtaaccc ttcgtgtcaa tttgtaaatt ttccattaaa
     1501 gatcgtggca cagcaaagaa tccagacatt ggatctgtga cgttattgac atgtaaccca
     1561 atttttgcga ttatcgcagc acctttgctg attagtcttc ttttaaatgg ccagccaact
     1621 attgctccat tttttatata tcttgatgca ataactattg aattagaatc atctaataac
     1681 ttttcaacca tttgaggaat aatttctgga ggatgtgaaa agtctgcatc cataacaagt
     1741 atataatcac cctgggagaa ttttacacct tcaagaatag caggaatcaa tccattcttt
     1801 tcttttctat taagaacgtg tattgaatag ttaatattct ctttaaatga attttttttt
     1861 ttcttgtaat catcatcatt gtctatataa ttttgaacaa tatttcctgt accatctgga
     1921 gaactatcat caactacaat aatttcggta aagatattat gataaagatt ttctttgatc
     1981 ttgtctaata atttgataat atttccagat tcattataag tgggaataat tatcgataaa
     2041 gtgaacatac ttttagtttt atatgtatct tgatgatgat tagtttgcac cctagttcta
     2101 tagtttcaat cggtgtatta aaattatcgt gagtaaattt gataacattt ttttatatat
     2161 tttttaacta agaaaattat actcattttt taaaagaatc atataaaaat tcatacttat
     2221 ttttatttat tttatagaaa tataaatata tttacaaaag tgaggatgca aattcttttt
     2281 attttaaaat attgtaaaat tattctaaaa tacaacatac cacaatacat gaggacatta
     2341 aagaatattg aagattgtta tataagatat agtaatacta tttaaattca atctaaaatt
     2401 attaattttg catatttgta ttactataat attcatgaca taatcaagct taaatctgag
     2461 ataaatttac aggaattgga gtattttgca tcaaaagaat tcagtgaaac ggatatcaca
     2521 ttgtctgtca attccttttc tagagatcca gatatgtcaa aaatgcgtac aaaaagaaaa
     2581 ttaattgcga aaaacttcga atctggaagt aagtcttatg agataaaata taccgagcat
     2641 tttggaaggt gtggtgcaca attccagata aatgttgatt ggaataaact ccagattttg
     2701 attaacgagt taatttcaaa gtcaaagcat gttacctatg ttaatttgat tgaacctctg
     2761 ttgagatttc tctttctttc taagggttat atccttttac actctgcttg tatgtcaacg
     2821 cctgatggta ttggtttttt tctttctgcc ccacctgata caggaaagac aactactgtc
     2881 atcaaatgtg taaaaaaagg attttccttt ttatcggatg atatgactat aataagtcta
     2941 cctaaccagg cactatgttt tccaaaatct atgactatta gtgcacacac ttacaaaacg
     3001 gctattgatg cacagtctgt agaacagaag caagatggag caaatgaaag taatgataaa
     3061 aaaggaatga ggattagaag tgtaattcat tcaaaaacag gaaggagttt gatgcacaag
     3121 ctagctgacc ataatgtccc aatttttaca ataaatacaa taggacagac aaaaataaaa
     3181 cctccaaaat atcatataag agatatcata aaagaagcta agattcaaga caagacaatg
     3241 ataagcttcc tttttttctt ggaaaaaggg gaagaaggac agaatgtcga gaaagtagac
     3301 aagatatcaa ctgatgatgc tttaaaaaga gcaatagaga atagtgatga tgcttttctg
     3361 tttcctccat atagcgattt aataaaatac gttaggatcg aaggtaaaac agcctacgat
     3421 ttattagagg aggaaaagaa gatgatgaga gaattattgt caggtattga gtgtaacgta
     3481 ctgaagagca gcggaagaag gtggacagaa atgatccttc aaaaatttaa tcaatgaaat
     3541 attttgtttg atttttatgt aataggaaaa tctacatcga gaaaatttaa aagaatttca
     3601 aaatagctaa ggaaaggtaa acaagaaacg aatctttgtt tataacaaca gattatacaa
     3661 aatatatcaa aataaaagat ggcggatttt actccatatc catgccgccc atgccgccca
     3721 tgccgcccat gccgcccatg ccgcccatgc cgcccatgcc gcccatgccg cctcccattc
     3781 ctcctggggg ggcctttgat ttggatgatg caataacatc gtctattctt aagagcatac
     3841 acgaggcttc agttgcagat tttattattt gttctttaat cacaactggt tctaaaatat
     3901 ttagtttgta catatctgct atcgtagcat ttcgtacatc tatccctgtc catttaattc
     3961 ctttaccttg cttagctctc aattctgcca ttgtatcaat tggatccata ccagcatttt
     4021 ctgcaagaca gattggaagt gtttctaacg cttctg
//
LOCUS       DATIAS010000025         2030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1776461, whole genome shotgun sequence.
ACCESSION   DATIAS010000025 DATIAS010000000
VERSION     DATIAS010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776461"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..452)
                     /locus_tag="VLA74_00535"
     CDS             complement(57..452)
                     /locus_tag="VLA74_00535"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSF49220.1"
                     /translation="MTINKEPKSLGMPWEKEYGYSQAVKVGDTIYIAGQVSHDDKGKI
                     VGRKDMEAQMRQAYNNIQKILEQYGATMDNVVEEILFVTDMETAFAAATKCRREIFSG
                     TPIVASTIVQIQRLAFPELMIEIRCIAKL"
     gene            1325..1735
                     /locus_tag="VLA74_00540"
     CDS             1325..1735
                     /locus_tag="VLA74_00540"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF49221.1"
                     /translation="MKLNKIVETCIYTSNLEEMKNFYINYLGLDLVSEEKGRHVFLKA
                     GKSMLLIFNPENTLNNSNSIFPIHGAMTTPSILHFAFEIKKDDYENWKNLLQMKKISI
                     DKELEMRNSKSIYFHDPSGNIVELITDNFWPVEG"
BASE COUNT          735 a          284 c          299 g          712 t
ORIGIN      
        1 cagtggtatt ttattatctt tctccaatct tttctttaag cactttgtaa agaggattac
       61 aacttggcta tacatctaat ctcgatcata agttcaggaa atgccagacg ctgaatttgc
      121 acaatggtgc ttgccacaat aggagtgcca gaaaagatct ctcttctgca cttggttgct
      181 gctgcgaagg ctgtttccat atctgtaaca aagagtattt cctctactac attgtccata
      241 gttgctccat attgttctag aatcttctgg atgttgttat aagcctgtcg catctgagcc
      301 tccatatctt tgcgtccaac aattttgcct ttgtcatcat gacttacttg tccagcaata
      361 tagatagtat ctccgacctt cactgcctgg gagtaaccat actctttctc ccaaggcata
      421 cctaggctct ttggctcctt gtttattgtc attatatgtc ttctttaaaa atattattta
      481 tttattcatt attatttttc cttattttca ataggggttt ttatttttca taattagata
      541 tagcatttat tcaccattcc aatctttaaa cgttgtttct tcaaatgagg gattgataat
      601 aattccaaaa ataaatcata cagatataat aaaggatagc tgtcaatatg caatatttta
      661 aatgatactt aattgatctt taaagttaga tatactatta attaatatag atctgctata
      721 agatcgatac aatttgattt aatagctggt ctcactttat agatggattt aaatcctact
      781 gagaaggata caaaaatgta ttaaatctat ataaatttag aaatggcatt aatgcaattg
      841 aatatgacta gtaattatat aaatgaacat gaatacgaga tctcagatat gatgtttatg
      901 ataaataaga tgaaagaagc aaacaagacg aaatagttat agaatatttc ttattataaa
      961 aggtgattaa agaataatag aacaaacact atttcattat tgttaataat aaatcctttc
     1021 taattaatta ttaagttata ttttcaaaat atatctaaaa aaagaagatt taaatcattt
     1081 attctataat agtctatgtg ccaaagcggc caaattcagt tttattttct ttttctgttg
     1141 cagggcttgt atctatagct atataattta ttgaatgatt atagacatat atggatctaa
     1201 tacttgataa tggagaaaat atgatgatta agaaaaatgt aacttcctca ttcgcttaaa
     1261 ttatattaca aatacaatta agaaaataat ttatattaaa tttataaatc aaacagaata
     1321 aacaatgaaa cttaacaaaa ttgttgaaac ttgtatctat acatctaact tggaggaaat
     1381 gaaaaatttt tatattaatt atttgggttt ggacttggta tcagaagaaa aaggaagaca
     1441 tgtattttta aaggcaggaa aaagtatgct tttgattttt aatccagaaa acacattaaa
     1501 taattcaaac agtatatttc ccatacatgg agctatgact acaccatcta ttcttcactt
     1561 tgcttttgaa attaaaaaag atgactatga gaattggaag aacctcttac agatgaagaa
     1621 aattagtatc gacaaagaat tagaaatgag aaacagtaag tcaatctatt ttcatgatcc
     1681 atcaggtaat atagttgaat taatcacaga taatttttgg ccagtagaag gttgaaatta
     1741 ggaataatga gtctttattg cttactgtaa gacaaaaaat aatcttgaat ataaacactg
     1801 ttttccatta atttgtcgtg attaggtgtt gtacttacat acataggtta caatttcatt
     1861 tacacacatg ggtaacactt tctagtctgc taggaagtgt atgaaaaata gaattacaaa
     1921 taaaatttaa tttaatacat gagaaagaat ggactggaga tactgtaact gacatctgca
     1981 tacgatatca gatatccaga aagatatact acaagtggaa gaacaggtac
//
LOCUS       DATIAS010000026         2222 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_959173, whole genome shotgun sequence.
ACCESSION   DATIAS010000026 DATIAS010000000
VERSION     DATIAS010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_959173"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /gene="aspS"
                     /locus_tag="VLA74_00545"
     CDS             <1..867
                     /gene="aspS"
                     /locus_tag="VLA74_00545"
                     /EC_number="6.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004815 - aspartate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006422 - aspartyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA(Asn) ligase"
                     /protein_id="HSF49222.1"
                     /translation="TFLSDEKFIEVNTPKIIATASEGGTALFPIFYYEREAFLAQSPQ
                     IYKEQLTMAFEKVFEIGPIFRAEPSRTNRHLSEATSIDVECAFVDYNDIMLLLEKMIR
                     FIIKSLSEDDLIKNSTELDIDQKIKDNKKPFPRLKYSELIEKLRNIGERVRWGDDLSP
                     QLLKKLDDDQLNNNFYFITDWPIAAKPFYVKENQNDSQICESFDLMYGSLEISSGSTR
                     ISNKEILIDRMKKKGLNLNSFDYHLRIFSYGVPPHAGCGIGLERLLMTLTKIDNIRDA
                     ILYPRDIDRLAP"
     gene            910..1188
                     /gene="gatC"
                     /locus_tag="VLA74_00550"
     CDS             910..1188
                     /gene="gatC"
                     /locus_tag="VLA74_00550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HSF49223.1"
                     /translation="MITKDQLKHLSKLSKIELTENEFETYTKQIEKIIKYLDKLDEIS
                     FEEAESLSSLPLTKLSDLREDAIIEPTTSIDKISKHLKDKFVKGPVMS"
     gene            1190..>2222
                     /locus_tag="VLA74_00555"
     CDS             1190..>2222
                     /locus_tag="VLA74_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSF49224.1"
                     /translation="MSNLYTLNVEQVTNGIKNREFTCEEYVSQLVERIKKIDSKINSF
                     ITINENAVTQAQHIDRKIRSGSTVGSLAGIVVGVKDNISTAGLKTTCASKMLSDYVPP
                     YDATVIKRLKDKNAIIIGKLNLDEFAMGSTTEWSHYGLTRNPWNLDYVCGGSSGGSAA
                     SIAAQLCTVSLGSDTGGSVRCPASFCSVIGFKPTYGLVSRYGLISYSNSLEQIGPIGK
                     TVSDIRNIMKVISGKDTNDNTTIDTKKNNNNNNYYDYNNDNKKYNQKIGLLKELINGA
                     DKPVYECIYSAVDKLNEFGFTCEDSSLNSTEYALASYYTIATAEASSNLARFDNIRYG
                     FELNPDDYEW"
BASE COUNT          877 a          281 c          393 g          671 t
ORIGIN      
        1 acttttcttt cagacgagaa atttatagag gtcaatacac ctaaaataat agcaacagct
       61 tcagagggag gaactgccct tttcccaata ttctattatg agagggaagc atttttggct
      121 cagagtcctc aaatatacaa agaacaactt acaatggctt ttgaaaaagt ctttgaaata
      181 ggtccaattt ttagagcaga gccttctcgt actaataggc atttatcaga agctacgtcg
      241 atagatgttg aatgcgcttt tgttgactat aacgatatta tgctattatt ggaaaaaatg
      301 atcagattta ttataaaatc attatctgag gatgatttga ttaagaatag tactgaacta
      361 gacattgatc aaaaaatcaa agataacaaa aaaccttttc ctaggctcaa atactcagaa
      421 ttaattgaaa aattgagaaa tataggagaa agagtaagat ggggagacga tttatctcct
      481 cagttactta aaaaacttga tgacgatcag ttaaataata atttttactt tataacagat
      541 tggcctatag cagctaaacc attttatgtg aaagagaatc aaaatgattc acaaatttgt
      601 gaatcctttg atttaatgta tggatcatta gaaatatcat ctggaagcac aagaattagt
      661 aataaagaaa ttcttataga tagaatgaag aaaaaaggat taaatttgaa ttcatttgac
      721 tatcatttga gaatatttag ttatggcgtg cctccacatg ctgggtgtgg aataggattg
      781 gaacggctat taatgactct cacaaaaata gataatattc gtgatgctat attatatcca
      841 agagatattg atagactggc accatagagg aaggagaaaa agaaaaggga gaaaagatga
      901 taaactaaaa tgattacaaa agatcaatta aaacatctaa gtaaactttc aaagatagaa
      961 ttaacagaaa atgaatttga aacttatact aaacaaattg aaaagataat aaagtattta
     1021 gataaattgg atgaaatttc atttgaggaa gctgaatcat tatcatcatt acctttaaca
     1081 aaattgtcag atttaaggga agacgctatt atagaaccaa ctaccagtat tgataaaatt
     1141 tctaaacatc ttaaggataa atttgtaaaa ggtccagtta tgagttaata tgtcaaatct
     1201 ttatacgctt aatgttgaac aagttacaaa tggaattaag aatagagaat ttacatgcga
     1261 agaatatgta tcccaactag tggaaagaat aaagaaaatt gatagtaaaa taaattcttt
     1321 cataacaata aatgaaaatg cagttactca agcacaacat atagacagaa aaataagatc
     1381 aggttcgaca gtaggctctt tagctggaat tgtagtagga gttaaagata atataagtac
     1441 agcaggcttg aaaacaacat gtgcttcaaa aatgctatct gattatgttc caccatatga
     1501 tgctactgtt ataaagagat taaaggataa aaatgcaata ataataggaa aattaaacct
     1561 cgatgaattt gcaatgggat caactactga atggagtcat tacggattaa ctaggaatcc
     1621 ttggaattta gattatgttt gtggaggatc ttctggtggt agtgcagcaa gtattgcagc
     1681 acaattatgt actgtatcac tgggatctga tactggtggt tctgttcgtt gtcccgctag
     1741 tttttgttct gtgattggat ttaaacctac atacggattg gttagtagat atggacttat
     1801 ttcctattct aacagtctgg aacagatcgg tccgatagga aagactgtat cagatatcag
     1861 aaatatcatg aaagttatat caggaaaaga tactaatgat aacacaacga tagatacaaa
     1921 aaaaaataat aataacaata actattatga ttataataat gataataaaa aatataatca
     1981 aaaaattggt ttattaaaag aattaataaa tggagctgat aagcctgtat atgaatgcat
     2041 ttattctgca gtagataaat taaatgaatt tggatttaca tgtgaagatt catccttaaa
     2101 ttcaacagaa tatgctcttg catcatatta tacaattgct acagctgaag ctagcagcaa
     2161 tctagcaagg tttgataata taagatatgg atttgaatta aatcctgacg attatgaatg
     2221 ga
//
LOCUS       DATIAS010000027         2646 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_959478, whole genome shotgun sequence.
ACCESSION   DATIAS010000027 DATIAS010000000
VERSION     DATIAS010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_959478"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..1842)
                     /locus_tag="VLA74_00560"
     CDS             complement(70..1842)
                     /locus_tag="VLA74_00560"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF49225.1"
                     /translation="MNNTLSQVIFGVGIVLAISALAAIFISSISLENENLQSSVTPPT
                     TTQSVSLNENETTSTKSSSKTNNVITSINIAQGSAAEQVTQFYDPNPAGISDGSKITW
                     INNDITMHTATASDGSFDTGLIQAGSSGSAIVKGKGNIPYSCTLHPWMKASLNIAGSN
                     TKNNTESNIINSNAGALETNASTTEDQSQSKSISVPTVNDTNLKVTPIISGLSMPTTM
                     AFLGPDDFLVLQKGGTVMRITNGTISNDPLLNVTVPTELTQGMLGITTSKNSKLNTTY
                     VFLYYTEGVKKPANGQNQTNVIEAVGNRVYRYELVDDKLVNPLLLLKLPAKQNFMDNG
                     GYLRIGPDNNLYLTVGAITGNNISDVETLTQNFVNGTPVDGRAGILRITQDGDSVLNE
                     KGNGLLGDSYPLNLYYGYGLKDSFGIDFDPITGNLWDAEPGRFISDEINMIEPGFNGG
                     FEALQGQSIYVPAAAVNLVDFNGTGKYRDPEFVWTQKIVPVGLKFLTSNKLGEKYQND
                     LFVGSFLNGKIYHFDLTDDRNHLVVPDSFVNKQMATWNSTGAHDITFGEGFGGISSLN
                     VGPDGYLYVISFTNGVIYKIMPTQ"
     gene            2318..>2646
                     /locus_tag="VLA74_00565"
     CDS             2318..>2646
                     /locus_tag="VLA74_00565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49226.1"
                     /translation="MSGIELAAEMGYGVPWLKLVLTIAILIATAFFIYVLLSTKFNHV
                     ALKGFDKAKYQLNKYHAERYWGIFVAGILIWFWVLGYPWMPPVAFEKALNENENQDVH
                     IVKITAG"
BASE COUNT          900 a          409 c          403 g          934 t
ORIGIN      
        1 caaaaaaact ttcaaaataa aaaaattgaa gtatgatttg ctattctaga attcaaattg
       61 gtaaaactgc tattgagttg gcattatctt atagatcaca ccgttagtaa atgaaataac
      121 atacaaataa ccatctggtc ctacattaag actactaata cctccaaaac cttctccaaa
      181 agttatatca tgagccccag tagaattcca tgttgccatc tgtttattaa caaaagaatc
      241 aggaactacc aaatggtttc tatcatctgt tagatcaaaa tgataaattt taccattaag
      301 aaaactacct acgaataaat cattttgata tttttcacca agcttatttg aagttaaaaa
      361 ttttaagcca acaggaacta ttttctgtgt ccaaacaaat tccggatctc gatattttcc
      421 agtaccatta aaatctacaa gatttactgc tgctgcagga acatagatgc tttgaccttg
      481 gagtgcttca aatccgccat taaaacctgg ttcaatcatg tttatttcat cactaataaa
      541 tcgacctggt tcagcatccc ataaattacc agttatagga tcaaagtcta tgccaaagct
      601 atcttttagt ccatagccat agtacagatt caatggatag ctgtctccaa gtaaaccatt
      661 acctttttca tttaggactg agtctccatc ttgggtaatc ctaagtattc cagctctacc
      721 atctacaggt gtgccattta caaaattttg tgttagagtt tcaacatctg aaatattatt
      781 accagtaatt gctcctacag ttaaatatag attattatct gggcctattc taagatatcc
      841 accattatcc ataaaatttt gttttgctgg caactttaag agtaataaag gattgactaa
      901 cttgtcatct actaattcat atcgatagac tctatttcct actgcttcta taacatttgt
      961 ttgattttgt ccattagctg gttttttgac accttcagta taataaagaa aaacatatgt
     1021 tgtatttaat ttggaattct ttgaagtagt tatacccaac attccctgag tcaattctgt
     1081 tggaacagtc acatttagaa gcggatcatt agagattgtt ccatttgtta ttctcattac
     1141 agttcctcct ttttgtaata caagaaaatc atcaggacca agaaatgcca ttgttgtagg
     1201 catgctaagc ccagaaatta ttggcgtaac tttaagatta gtatcattaa cagttggaac
     1261 agaaattgat tttgattgac tctgatcttc tgttgtggat gcattagttt ccaaagctcc
     1321 agcattagaa ttgataatat ttgattctgt attatttttt gtatttgatc ctgctatgtt
     1381 gagagaggct ttcatccaag gatgaagggt acagctatat ggaatattcc ctttgccttt
     1441 tacaattgca gatccagatg atcctgcttg tatgagacca gtatcaaaag atccgtcaga
     1501 agcagttgct gtatgcattg taatatcatt atttatccaa gtaattttag agccatcaga
     1561 tattccagca ggatttggat cataaaattg cgtaacttgt tctgcagcag aaccttgagc
     1621 aatatttatt gaagttataa cattattcgt tttacttgaa gatttagtag atgtagtctc
     1681 attttcatta agagaaacag attgtgttgt agtagggggt gttacacttg attgtaagtt
     1741 ttcattctct aaagaaatac tactaataaa gatggcagct aaagcagata ttgctaaaac
     1801 tattcctact ccgaatataa cctgagataa ggtgttattc aattatatta taaaactata
     1861 gtaatggtta aaaagatttt ctaatataga catataataa actaacaagt ttaacaatat
     1921 cacttacaaa caataactaa atataattat aacttttctg atattcaact gcggttcaac
     1981 ctctagaaaa ctctatatat ctaatgatga ttggtagaat gtacaaagaa cttatttcat
     2041 tgattatatt attcaagtaa tattgtttaa attttatttg ttggagaaca tcttatgata
     2101 ataaattcga taaatttaaa gaatagtgct attttgctaa aagttctatt ataacaaaaa
     2161 gaaatctaat ataattttaa ttaaggaagt atactttaga aaagtagtaa acataacata
     2221 cactaaattt aaaaattgat ttgtttatta ttttttgttt acatgataat aataaagaaa
     2281 ctttttatat tttgaattaa ctattgtaat agtttcaatg agtggaatag aacttgcagc
     2341 cgaaatggga tatggagttc catggttaaa actcgtttta actatagcaa tattaattgc
     2401 tacagctttt tttatttacg ttttactttc tacaaaattc aatcatgtcg cattgaaggg
     2461 ttttgataag gcaaaatatc aacttaataa atatcatgca gaaagatatt gggggatttt
     2521 tgttgcaggg atattgattt ggttttgggt gttaggatat ccctggatgc cacctgttgc
     2581 gtttgaaaag gcattaaatg aaaatgaaaa tcaagatgtt catattgtaa aaataactgc
     2641 tggtca
//
LOCUS       DATIAS010000028         2331 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1777564, whole genome shotgun sequence.
ACCESSION   DATIAS010000028 DATIAS010000000
VERSION     DATIAS010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1777564"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VLA74_00570"
     CDS             complement(<1..262)
                     /locus_tag="VLA74_00570"
                     /inference="COORDINATES: protein motif:HMM:NF013350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HSF49227.1"
                     /translation="MSNIKIGVLGIQGDIEENILSTEEALKNQNLQGTVESVRYSESI
                     EELDGLILPGGESTVIGSLLSIHGKVFQTIEKRITEGMPVLGT"
     gene            complement(259..1230)
                     /gene="pdxS"
                     /locus_tag="VLA74_00575"
     CDS             complement(259..1230)
                     /gene="pdxS"
                     /locus_tag="VLA74_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HSF49228.1"
                     /translation="MTISLEAIEFEPKGIKFKSLPNEQLVQGTTLIKRGFAHMQKHGV
                     IMDVTNVEQAQIAEDAGAVAVMVLDKLPYDVRKAGGVARTASIKVIEAIMDEITIPLM
                     AKCRIGHISEAKILEVIGVDMIDESEVLTPADEENHIWKWDYTTPFVNGAKNLGEALR
                     RIEEGSSMIRTKGEPGTGNIAEAVRHIKQVNNDIRKLRSFYIDKDEQELIKFSRELKV
                     SYSLIKETAKISKLPVVNFAAGGISTPADAALVMNLGCDGVFVGSGIFKAEDPEQRAK
                     SVVLATTYYDDPKIIMEAQKLVDEKKSLVGLDTKSLELRMQERGPTI"
     gene            complement(1338..1958)
                     /locus_tag="VLA74_00580"
     CDS             complement(1338..1958)
                     /locus_tag="VLA74_00580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49229.1"
                     /translation="MSSSLGNNSQTSFYLNGSIFSLIFIGDKIHINDNDNFGSLLNLE
                     KEKENTNFVDFLTNSLIDIISKGDSSFPLGQVLSNSNITAYNNPDTLKKLLLLNGSWN
                     LDVRNGNIVSFDAKISTINKDGMSPHIYEILNLVVNNNIPIKLSQNDSTIIEGRADII
                     TPNNIKNIDLYLILQEDTISIILEPKILGNDYNGQPIYGLTSYMKN"
     gene            complement(2140..>2331)
                     /locus_tag="VLA74_00585"
     CDS             complement(2140..>2331)
                     /locus_tag="VLA74_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49230.1"
                     /translation="LNEILELSYSTAEHHPYWNIIYNTSEIAKTTLDNWDENFSHDQI
                     QEMIWRNSEIKNTLSRLEK"
BASE COUNT          752 a          392 c          282 g          905 t
ORIGIN      
        1 atgttcctaa tactggcata ccttcagtaa ttctcttttc tatagtttga aagactttac
       61 cgtgaataga tagtaagctt ccaattactg tactttcacc acctggtaat attaaaccat
      121 ctaattcctc tatggattca gaatagcgaa ctgattctac tgttccctgt aagttttgat
      181 tttttaatgc ttcttctgtt gataatatgt tttcttctat atctccttga attcctaata
      241 cccctatctt aatattgctc aaatagtagg acctctttct tgcatacgta attcaagact
      301 tttagtatct agacctacta acgatttttt ttcatctact aatttttgag cttccataat
      361 tatcttagga tcatcataat atgttgtagc taacactact gactttgctc tttgttctgg
      421 atcttcagct ttaaaaatac cagaaccgac gaaaacacca tcacaaccta aattcataac
      481 taatgctgca tcagcaggag ttgatatacc accagctgca aaatttacta cgggtaattt
      541 agatatttta gcagtttctt taattaatga ataagaaact ttgagttcac gggaaaattt
      601 aattaattct tgttcgtctt tgtcaatata aaaagatcga agttttctga tgtcattatt
      661 aacttgttta atatgcctga ccgcctctgc aatattccct gttccaggtt cacctttagt
      721 cctaatcata gaacttcctt cttctattcg tctcagcgcc tcacctaggt tctttgcacc
      781 atttacaaaa ggagtcgtat agtcccattt ccatatgtgg ttttcctcgt ctgcaggtgt
      841 aagaacttca ctctcatcta tcatatcaac acctatcact tcaagtatct ttgcctcaga
      901 tatatgcccg atcctacatt ttgccataag tggtattgta atttcatcca ttattgcttc
      961 aataacttta atacttgcag ttctagctac tcctccagcc tttctaacat catatggtaa
     1021 tttatctaaa accatgactg caacagcacc agcatcttct gcaatttgtg cttgttctac
     1081 attagtaaca tccataataa caccatgttt ttgcatatga gcaaaacctc gttttattaa
     1141 tgtggttcct tgaactaatt gttcattagg taaactctta aatttgatgc ccttgggctc
     1201 aaactcaatt gcctcaagag aaattgtcat tattttaaat tattagaaag catctattat
     1261 agctttagtt tttagtgtac ttggcattgt aaagaaagtt gtcagtaatt atttgaaata
     1321 gtaattggct aaatatacta atttttcata taactagtta atccataaat aggttgtcca
     1381 ttgtaatcat ttcctaatat tttaggttcc aaaataatac ttattgtatc ttcttgcaaa
     1441 attaaataaa ggtctatgtt tttaatatta ttaggagtta ttatatctgc tctaccttct
     1501 ataatagtac tatcattttg agataattta ataggtatat tattatttac aactagattt
     1561 agaatttcat aaatatgtgg agacattccg tctttattga ttgtagatat tttagcatca
     1621 aaggacacaa tattcccatt tcttacatct aaattccaac taccattaag aagcagtagt
     1681 ttttttaaag tatcaggatt attatatgct gtaatatttg aatttgaaag tacttgtcct
     1741 aaaggaaaac ttgaatcacc tttagaaata atatctatta aactatttgt taaaaaatct
     1801 acaaagtttg tattttcttt ttctttctct aaatttaaaa gactaccaaa gttgtcatta
     1861 tcattaatat gaatcttatc tccaataaaa attaaagaaa aaatagaacc gtttagataa
     1921 aaagatgttt gagaattatt tcctaaacta ctagacaaat ttaaaattgg atttgatcct
     1981 ccaaaataca gaaatttaaa taatattaaa aaagctaaag tgattacaaa taatattata
     2041 atccatttca ttaaataaat ctttaatatt tttaatacta ttaaatttat atggttatta
     2101 ttattgatag caataataaa ttaaaaaata gtgttactat tatttttcta atctacttag
     2161 agtattttta atttcactgt ttctccaaat catttcttgt atttgatcat gactaaaatt
     2221 ttcatcccaa ttatctagtg tagtttttgc tatttcagaa gtattatata ttatattcca
     2281 atagggatga tgttcagctg tggaatatga taattctaat atttcattta a
//
LOCUS       DATIAS010000029         3045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1641126, whole genome shotgun sequence.
ACCESSION   DATIAS010000029 DATIAS010000000
VERSION     DATIAS010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1641126"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..1275)
                     /gene="priX"
                     /locus_tag="VLA74_00590"
     CDS             complement(205..1275)
                     /gene="priX"
                     /locus_tag="VLA74_00590"
                     /inference="COORDINATES: protein motif:HMM:NF033412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase noncatalytic subunit PriX"
                     /protein_id="HSF49231.1"
                     /translation="MITSTVEKQDREKKVNDGIDFLLSHFEGRQRLFPRKMSTFASKG
                     KQFTVYNKEQILNACIISNFLDCRINAYPVLEERLFQAPNIIFIDLDLSSDLKKLDKN
                     LEKTLKIIKQKLDGFNPTVLWTGNGYHIYIVLDVRPLELIEELRELSNESSKQFLRFA
                     ESTFTNNKKDSQHNPSFKSCLLRIPGTINSKNGLKVKIIQRFDENNIPSPGNQLLREF
                     RLYLADVDIRKSRMIKFNKSAGNHYIESQYKSSASIHYKWIEKLLETPIEDGRKYTLW
                     KILCPYLVNVRKLQYESSYQILDTWLEICNKSRNLDFNPDIEIKVKLSNVKHYNPISI
                     KVLKEDNNNLYLLIKKLIINTT"
     gene            complement(1256..2059)
                     /locus_tag="VLA74_00595"
     CDS             complement(1256..2059)
                     /locus_tag="VLA74_00595"
                     /inference="COORDINATES: protein motif:HMM:NF012364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HSF49232.1"
                     /translation="MQLALKNLINGIYGLFGTDFFDFADYKVAELTTAFGRDVLQYMR
                     EIAKEVYGFKVIYGDTDSIFVTNIKNENLIEKFITECLIVDEVDVEVDKVFTKFLITK
                     KKHYIGIYTEPSKEPEIKGMEGIKSDRPPWIKKLERQFALDIKNNIKPIVNLQKEYRR
                     MEEGQVPIEELQIKLVLQKNAEEYPENSLQRKLSLEKGGNLQQGDSIIYYKSNKTGGG
                     TINPLSYSRNKYLEMFESIFEDVLTVMGFDFKRDVVGFTSLSINDNLNR"
     gene            complement(2050..2952)
                     /locus_tag="VLA74_00600"
     CDS             complement(2050..2952)
                     /locus_tag="VLA74_00600"
                     /inference="COORDINATES: protein motif:HMM:NF015154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HSF49233.1"
                     /translation="MRLQDKESGTFSGRDSNLKVIDSVCKYYDIPSIISFDKRGIPYV
                     RGYDYHIENDYYLQQNKFNYYYHIDLYNVYKKPLVKSIIYSNRYKDLSLESVSQAILK
                     ESKFENLKGSDIFHISKEKLLQYVTQDATLVMKLSKHNNYEILDLMNAISIITDLPFD
                     RVCHAGISSWWGNIIKREFGEPRQQLLQKKSYTGGYVIEPTKGYYQQPVYVLDVKSLY
                     PTMMINQNISFDTVNCDCCKYDLEARVSPDIMKLINENLSYDNSRQDRYWICKKKTEL
                     FLSSLLNSEMKDSDNRNKAILQCN"
BASE COUNT          944 a          482 c          365 g         1254 t
ORIGIN      
        1 aaaatactaa ttagaatgga tgtagatcta ttttgtactg ctagtttgtt ggtttggatg
       61 attgtctttc accaaaacat catacaccaa tagactagct ttattcgtta tgaaaatgga
      121 ataattatga cccagcctca tatatataat atattacaga ttttaatttt attttagaat
      181 ttcaataaca agactttcga atagtcatgt tgtatttata attaattttt ttattaacaa
      241 atacaaattg ttgttatctt cctttaatac tttaatagag attggattat aatgtttaac
      301 attacttagc ttaactttga tttctatatc tggattgaaa tctaaatttc ttgatttatt
      361 acaaatttct agccatgtat ctaatatttg atatgatgat tcatattgta gttttctaac
      421 atttaccaaa tatggacaca atattttcca tagggtatat tttcttccat cttctatagg
      481 agtttctaat aatttttcaa tccatttgta atgtattgat gctgatgatt tatattgact
      541 ttcaatataa tgatttcctg ccgatttgtt aaactttatc attctgctct ttctaatatc
      601 aacatctgct aaatacaatc tgaattccct taacagctga ttgccgggtg agggaatatt
      661 attttcatcg aatctttgaa ttatttttac ttttaaacca tttttagaat tgattgttcc
      721 tggaattctt aacaaacatg atttgaaaga aggattatgt tgagaatctt ttttattatt
      781 tgtaaatgtg gattcagcaa atcttaaaaa ttgtttagat gattcatttg ataattctct
      841 taattcttct atcaactcta atggtctaac atctaaaact atgtaaatat gataaccatt
      901 gccggtccag agaactgttg gattgaatcc atctaatttc tgttttatta tctttaatgt
      961 tttctctaaa tttttatcta gtttttttaa atcagatgat aaatctaaat ctatgaatat
     1021 tatatttggc gcttgaaata atctttcttc taaaactgga tatgcattaa ttcggcaatc
     1081 taagaaattt gatataatac atgcattaag aatttgttcc ttattatata cagtaaattg
     1141 ttttccttta cttgcaaaag tagacatctt tcgtggaaat aatctttgcc taccttcaaa
     1201 atgagatagt aaaaagtcga tgccatcatt tactttcttt tctctatctt gtttttcaac
     1261 ggttgaggtt atcatttatg gataaacttg taaatccaac aacatctctt ttgaaatcaa
     1321 aacccattac agtaagaaca tcttcaaaaa tagattcaaa catctctaga tatttgtttc
     1381 tgctataaga taatggattg attgtgccgc cacctgtttt atttgattta taatatatta
     1441 tggaatctcc ttgctgtaga ttgccgcctt tttctaaact caactttctt tgtaatgaat
     1501 tttctggata ttcttcagca tttttctgta atacaagttt aatctgtaat tcttcaattg
     1561 gtacttgacc ttcttccatt cttctgtatt ctttttgcag atttactatt ggtttaatgt
     1621 tattttttat atctaatgca aactgtcttt ccaatttttt aatccaagga ggtctatcag
     1681 attttatacc ttccatgcct ttgatttctg gttctttact aggttcagta taaattccaa
     1741 tataatgttt cttttttgta attaaaaatt ttgtaaatac tttatcaact tcaacatcaa
     1801 cttcatcaac tatcaagcat tctgtaatga acttttcaat taaattttca ttctttatat
     1861 tggtaacaaa aatactatca gtatctccat agataacttt aaacccataa acctctttag
     1921 cgatttctct catatactgt aaaacatctc ttccaaatgc agtagttagc tcggctactt
     1981 tataatccgc aaagtcaaaa aagtctgttc caaacaaacc ataaattcca tttatcaaat
     2041 tcttgagcgc taattgcatt gaagtattgc cttgttcctg ttgtctgaat ctttcatctc
     2101 tgaatttagt aaggagctga ggaataattc tgttttcttt ttacatatcc agtatctatc
     2161 ttggcgcgaa ttatcatatg atagattttc atttattaat ttcataatat ctggagaaac
     2221 tcttgcttct aaatcgtact tacaacaatc acaattgaca gtatcaaaac taatattttg
     2281 atttatcatc attgttggat atagtgactt tacatctaaa acatatactg gttgttgata
     2341 atatcctttt gtcggttcta ttacatatcc gcctgtataa cttttctttt gtaataattg
     2401 ttgtcttggt tctccaaatt ctctttttat tatattaccc caccatgaag aaatgcccgc
     2461 atgacaaact ctatcaaatg gtagatcagt aataatagaa atagcattca tcaaatctaa
     2521 gatttcataa ttattgtgct ttgaaagttt cattacaagg gtagcatctt gagtaacata
     2581 ttgcaatagt ttctcttttg aaatatggaa aatatcagaa cctttcaaat tctcgaattt
     2641 actttctttt aaaattgctt gagatacaga ttccaaactt aagtccttgt atctattgct
     2701 ataaataatt gattttacta atggtttttt gtatacattg taaaggtcga tatgatagta
     2761 atagttaaac ttgttttgtt gtaaatagta atcattttca atatgataat cataacctct
     2821 tacatatggt atacctcttt tatcaaaaga tattattgaa ggaatatcat aatacttgca
     2881 gactgaatca atgactttta aattagaatc tctgcctgaa aaggtgccgc tttctttatc
     2941 ttgtagtctc attcattcat tcattcattc attcattcat tcattcattc attcattcat
     3001 tcattcattc attcattcat tcattcattc attcattcat tcatt
//
LOCUS       DATIAS010000030         2064 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_960573, whole genome shotgun sequence.
ACCESSION   DATIAS010000030 DATIAS010000000
VERSION     DATIAS010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_960573"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..790)
                     /locus_tag="VLA74_00605"
     CDS             complement(203..790)
                     /locus_tag="VLA74_00605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49234.1"
                     /translation="MLTENNYYQKSSKLYIVYCSLAGLIAGWAISGLLTIVDFISQTP
                     PGTFFGVIGISLGFYDPSIAQYIGFVLHLLTGLTAGNIFGQVSLFWKGLSPYNSQHGI
                     LMGMIVGILLWAILFLPLATFIIQPRLDSFASSMVPNQYVYSIASHFQDLYYIIIGGS
                     FIFHLVYGALLGYIAGRMSEVGIFQQQKRQNIREK"
     gene            933..1133
                     /locus_tag="VLA74_00610"
     CDS             933..1133
                     /locus_tag="VLA74_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49235.1"
                     /translation="MNFIKNITYGFVGGTYGVTSLGVIDGGHIFAIASVALGGAAMVS
                     ALIVRNQIKRKELDKKLAIKMR"
     gene            1198..1899
                     /locus_tag="VLA74_00615"
     CDS             1198..1899
                     /locus_tag="VLA74_00615"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF49236.1"
                     /translation="MKYNNISQLKAEILYERYQYNTSIKRGQDFLLNHVDSKLFLVVM
                     YADLVGSTKMSMALPVERMAKIIKAFSHELSSVVESYNGFVLKYVGDAVIAFFPSGFN
                     KYLSCDTAFQCANSMINVIENGINPILEKDKDNYPKLAVKIGIDEGENLAIQYEFDKS
                     SPIDLIGYPMNVAAKITSLTGPNKISVGNNVYKLIHPTLQSKFQEMRIKKGTNEWKYI
                     DLENNLLPYKVYTTN"
BASE COUNT          820 a          274 c          293 g          677 t
ORIGIN      
        1 tccattatat agaaaattgg tttcatctat agaaatatca tgtaaaaatt aaacaaaaat
       61 aaatattata atagatgatt tatcttttca attatattta taattataat tgaaatctca
      121 tatcccattc acctttaata gtagtgagat tagtaaagga acttcttagt aaatgtacag
      181 tttcaatata tctatgaaat ccttattttt ctcttatatt ttgtcgcttt tgttgttgaa
      241 aaattcctac ctcggacatt ctacctgcaa tatatccaag taatgcccca tagacaagat
      301 gaaatataaa tgaacctcca attataatgt aatacaagtc ttggaaatga gatgcaatac
      361 tatatacata ttggttaggt accatagaac tagcaaaaga gtcgagtcgc ggttggataa
      421 taaaagtagc aagtggtaga aacaatatag cccataataa tatcccaact atcattccca
      481 tcagaattcc atgttgagaa ttataaggtg ataagccttt ccaaaataaa gatacttgtc
      541 caaatatatt acctgccgtt agtcctgtta acaaatgcaa aacaaatcct atatattgag
      601 ctatactagg atcataaaat cctaaagaaa taccaataac tccaaagaaa gtaccgggtg
      661 gagtttgaga tataaaatca actattgtaa gtaatccaga tattgcccat cctgcaatta
      721 atccagcaag agaacaataa actatataga gttttgatga tttttgataa taattatttt
      781 cagttagcat atatatgtta caataaagag atattatata aatagtgcct attatcttta
      841 atatagtgcc taacagcttt tataagaaaa aagttagcac tattaaaaat attagacact
      901 agtttatata ttacaaaaca gtataatatc atatgaattt cataaagaac ataacttatg
      961 gatttgtagg tggaacatat ggagtaacca gtttaggtgt aatcgatggt ggtcatatat
     1021 ttgctattgc aagtgtggca ctaggtggag ctgccatggt ttctgcttta atagtgagaa
     1081 atcaaataaa aagaaaggaa ttagacaaaa aattagctat aaaaatgaga taataataaa
     1141 ataaatacaa taaccaaact acatcatatt ttttatttta taataaataa caataaaatg
     1201 aaatacaaca atatttcaca attaaaagca gagattctat acgagcgtta tcaatacaat
     1261 acatcaataa agagaggaca agactttctt ctcaatcatg ttgattctaa actttttctt
     1321 gtggtaatgt atgctgattt agtaggttca acaaagatga gtatggcttt accagtagaa
     1381 agaatggcaa agataatcaa agccttttca catgaattgt catctgttgt tgaaagttat
     1441 aatggatttg tattaaagta tgtaggagat gcagttattg cgttctttcc aagcggcttt
     1501 aacaaatatc tatcttgtga tactgcattc caatgtgcaa attcaatgat taatgtaata
     1561 gaaaatggta ttaatccaat tttagaaaaa gataaagata attatccaaa attagctgtt
     1621 aaaataggaa tagatgaagg agaaaattta gctatacaat atgaatttga taaaagctca
     1681 cctattgatc ttataggata tcctatgaat gtagcagcaa agataacttc cctaactgga
     1741 ccaaacaaaa tatctgttgg aaataatgta tacaaattga tacatcctac attacaatca
     1801 aaatttcagg aaatgaggat aaaaaaggga actaatgaat ggaaatatat tgatctggaa
     1861 aataatttat tgccatacaa agtttataca actaattaaa gatttgtatt taactatctg
     1921 atgatacttt tttaaaataa tccttcaaaa gagattagat ttaaagagtt attactacat
     1981 tataataata ttaatttaat agatttcatt cattaaacac gaagaacttt ataaatatca
     2041 atgttcatct tcttttattc tatt
//
LOCUS       DATIAS010000031         3261 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1233478, whole genome shotgun sequence.
ACCESSION   DATIAS010000031 DATIAS010000000
VERSION     DATIAS010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1233478"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VLA74_00620"
     CDS             <1..447
                     /locus_tag="VLA74_00620"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSF49237.1"
                     /translation="ELDMKILTELTKDASISVPQLSKKLNINSSVLYSRIKRLSKRSL
                     IKKFTIIVNENMLGLNIKATVGINRDPKRKEPIHQELLLIPEVRSLSEVTGRFDMIVN
                     VNASTLEELHNVVIERIGKIEGIQNTETFVEMQRTEKDPDYSKHSD"
     gene            526..726
                     /locus_tag="VLA74_00625"
     CDS             526..726
                     /locus_tag="VLA74_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49238.1"
                     /translation="MLSITQIFSMLERKILDMYQTLLLAKKTSKDDYSTHMRFILLSM
                     GVVGTLGFVIKLIGEFLTSAPK"
     gene            1022..1405
                     /locus_tag="VLA74_00630"
     CDS             1022..1405
                     /locus_tag="VLA74_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49239.1"
                     /translation="MDQKSDIKLQIFEQIIYPNEEIHGRIELSYDGRFDSVVINSQIE
                     NSNDIFNYVELNGKKINHPYARLSIFRKEIGDRNTIEFTAITKHIPSTSSGLSRVKFR
                     TSIIQEHKEIANYILFRDIKKEKTV"
     gene            complement(1407..1880)
                     /locus_tag="VLA74_00635"
     CDS             complement(1407..1880)
                     /locus_tag="VLA74_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF49240.1"
                     /translation="MERVQQTNLGGLAIIFFIIAITISIAFYQFIYLNELNAKPQVSE
                     EISNPPQSAEVSIVEGAALPTNSKFFDPKDARATLEIDNKIVWTNHDTTAHTVTTDND
                     YHDKLSGKFDSMETIGLVPPGGIFEFVFTEDGEFPYHCEPHPWMTGMVTVVKNYS"
     gene            complement(1987..>3261)
                     /locus_tag="VLA74_00640"
     CDS             complement(1987..>3261)
                     /locus_tag="VLA74_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HSF49241.1"
                     /translation="HMRNIHYHASNAMVMMAILHMYYQYFSGRYKIRNEILWVTGILI
                     GVLTILEAFTGYDIIFSERAELAISIAASLTNSIPILGPDMRDAFFGSGFHDFILRFY
                     AFHVFFLPIVLIGLMALHFPRFMVFDVPMVMALSGAVMITGGVFPVDMGLKFDPNVPP
                     GITVPEWYLTGLYAFLRSQYDKFVTGVAWPGLFIFTLLIIPFIDRYKKFSWKDRPIIT
                     AIGITSIAQIVVTTYWGFYIDPDRTKSLLERLVIDPIFLYSVMIALVPLSFGFTYLMI
                     KLVKNAEASAKKQPKKSEGTITLPEKWIYYVFIALIGFQIYLNIAAYYAVLNGMKNIS
                     LFIIGIIMLVFAGMFHIYRHGRSNANNPPPPPIPFREKIKSDKQKSLEDSSIPKDQLS
                     YENQTKGKGLINTLFGKGKKSRSSFEKMWNRE"
BASE COUNT         1175 a          540 c          533 g         1013 t
ORIGIN      
        1 gagcttgata tgaaaatatt gacagagctt actaaagatg caagtatttc ggtaccgcag
       61 cttagtaaga aattaaacat caattcctcg gtactttaca gcagaattaa acgtttatcc
      121 aaaagaagtc tgataaagaa atttacgatt attgtaaatg aaaacatgct aggtctaaat
      181 attaaggcta ctgttggaat aaatcgtgat cctaaaagaa aagaaccaat tcaccaagaa
      241 ttacttctca ttccagaagt aagatccctt tcagaggtga caggcaggtt tgatatgatt
      301 gtaaatgtta atgccagtac attagaggag ctgcataatg tggtaataga gagaattggc
      361 aaaattgaag ggatccagaa tactgaaact tttgtagaaa tgcaaagaac agaaaaagat
      421 ccagactatt caaagcattc agattaattg caaatggttt tatagattat aaaatagcaa
      481 catgtagtta aattcaaata aagctaaaac ttagatagga aggtattgtt aagtataact
      541 caaatttttt caatgttgga acgtaaaatt ttagatatgt atcagacatt attgctagca
      601 aaaaaaacat caaaagacga ctattctact cacatgcgat tcatcctttt atcaatgggt
      661 gtagtaggca ctttaggatt tgttataaag ttaatcggag aatttttaac atcagctcca
      721 aagtaaaagt aaatttatca aagttttttg ctcatagagg caaattatcg ttctaaatta
      781 tacatatttg ttaccaatca agaataaatg tccgaaaata attaacgggc ccggagggct
      841 tcgatccctc gacttccggc tatcttctta gtactattag aaggcaggcg ctctatccat
      901 gctgagctac gagcccaatt cattacagac tatctgaaac ctgcaaattt aaagattatc
      961 aattatttta taaaagcata agtaattaag ataaataaaa tcaaatctat gcaatcacta
     1021 tatggatcag aagagcgata taaaactaca gatatttgag cagattattt atccaaatga
     1081 agagattcat ggaaggatcg aattgagtta tgatggcaga tttgattcag ttgtaataaa
     1141 ttcgcaaatt gaaaattcaa atgacatttt taattatgtc gaactcaatg gaaaaaaaat
     1201 taatcatcca tatgctagac tttcaatttt tagaaaagaa ataggagata gaaatactat
     1261 agaatttaca gcaataacca aacacatccc ctccacatca tctggtttga gtagagtaaa
     1321 attcagaaca tcaattattc aagaacataa agaaattgca aattatatat tgtttcgaga
     1381 tataaagaaa gaaaaaacgg tataggttag gagtagttct ttacaactgt taccatacca
     1441 gtcatccaag gatgtggttc acagtgatat ggaaattcac cgtcttcagt aaaaacgaac
     1501 tcaaaaattc caccaggtgg taccaaacct attgtttcca ttgaatcaaa ttttccagat
     1561 aatttatcat gataatcgtt gtccgtagtg actgtatggg cagtagtatc atgatttgtc
     1621 catactattt tgttatcaat ttctagagta gctcttgcgt cttttggatc gaaaaattta
     1681 gaattagttg gcaatgcagc tccttcgact atagatactt cagctgattg aggaggattt
     1741 gaaatttctt ctgaaacttg tggcttagca tttaattcat ttagataaat gaattgataa
     1801 aaggcaatac taattgtaat agcaataata aagaaaataa tagctaatcc gcccagattt
     1861 gtttgttgta ctctctccat tttcttaacg cctatttgtt ataccttagc taataataga
     1921 acataattta aattttaata ttttctgtat ttggtagaga aaaaaatgat atttaatata
     1981 atgtagttat tctctattcc acatcttttc aaaactgcta cgcgattttt ttcctttccc
     2041 aaataacgta tttattaacc ccttgccttt tgtctgattt tcatatgata attggtcctt
     2101 tggaattgaa ctatcctcta aggatttttg cttatctgat tttattttct ctctaaaagg
     2161 aataggtgga ggtgggggat tattagcatt tgatctacca tgtctatata tatggaacat
     2221 tcctgcgaag accaacataa taatacctat tataaataga gagatatttt tcataccatt
     2281 tagaacagcg taatatgcag caatatttag ataaatttgg aaaccaataa gtgcaatgaa
     2341 tacataatag atccattttt ccggcagtgt tattgttccc tctgatttct ttggttgttt
     2401 tttagcactg gcttcagcat ttttcaccaa ttttatcatc aaatatgtaa atccaaaaga
     2461 gagaggaacc aaggcgatca ttacactata aagaaatata ggatctataa ccaatctttc
     2521 aagaagagat ttggttctgt ccggatctat gtaaaatccc caataagttg taacaactat
     2581 ctgagcaata cttgttatac ctattgcggt aataataggt ctatctttcc atgaaaattt
     2641 tttgtaccta tcaatgaaag gtattattaa tagagtaaat ataaacaacc ctggccaggc
     2701 aacccccgta acaaatttat cgtattgtga ccttagaaat gcatatagac cagttagata
     2761 ccactcagga actgtaattc ctggcgggac attaggatca aactttaacc ccatatcaac
     2821 aggaaataca ccccctgtta tcattactgc cccagataac gccatcacca ttggaacatc
     2881 aaacaccata aaccgaggga agtgaagagc cattagcccg atcagcacaa taggcagaaa
     2941 aaacacatgg aatgcataaa aacgcaatat gaaatcatgg aaaccagatc caaaaaacgc
     3001 atcccgcatg tcaggaccaa gaatcgggat agaattagtc aaagatgcag caattgaaat
     3061 agcaagttca gctctttcac taaagattat atcgtaacct gtaaatgctt caagaatagt
     3121 cagaacccca atgagaatac ctgttaccca taaaatttcg tttctgattt tatatctccc
     3181 actaaagtat tggtagtaca tatgaagaat tgccatcatt accattgcat tagaagcatg
     3241 atagtgaatg tttctcatat g
//
LOCUS       DATIAS010000032         3977 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_825187, whole genome shotgun sequence.
ACCESSION   DATIAS010000032 DATIAS010000000
VERSION     DATIAS010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3977
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825187"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(827..2851)
                     /locus_tag="VLA74_00645"
     CDS             complement(827..2851)
                     /locus_tag="VLA74_00645"
                     /inference="COORDINATES: protein motif:HMM:NF013647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit I"
                     /protein_id="HSF49242.1"
                     /translation="MSTLLKPAPMARIAVIGLKKYRQQIISILHEMNVIQLEPLSKEA
                     DSFLMSEHESDLHREISDQLLRVRGLINTLPSTTVQRKTSFSSFEELIKTIKSIDIDG
                     QIASLEREKENLLTEMKAAENNIKLLEEFSFFPEDLKILNLSFARSFFGRVATEKLDA
                     FKNTLESKDIPIILYSQEEKKLTYFVLVIPPHLPSDILASAVNVHGVHLESVPKLKGK
                     PREIIHDQQKIYNDLSSKLNQINLQLTEISKSHYTFLKGAEEQLEIENKKLEVIENLK
                     GTNDAFALEGWIPRSKLENVKTAFSKYSEGTLIYELETKESPPTLLENPKRFKVFESF
                     IRFYSLPSGTEFDPTLIFGLFFPIFYGLMIGDVGYGLVILLVSLWVIRRVQGGKRDLN
                     IMPRFLRNFAKTILRPTQMVKLAKVMIPGCIITIILGFLFDLYFGFHLNAYLFSYLND
                     TFGLNLPHEGAFLNPIGTFGLRKLLLLSGYIGLGMVSFGLVLGILNSLREGLIKHVIS
                     KVGWLLFGWGIALIGLALINHVNINPLDSVQGIAYFALIFGGVGLMFYGEGVRALMEL
                     PSIISHILSYTRIVGILLASVILAHVIDFIFLRSLDQSIAYSILGIMIFIIGHLFNII
                     IGVFEPGIQGARLIYVEFFSKFYHGSGRQFKPFGSKRKFTIDQYNIEERK"
     gene            complement(2868..3200)
                     /locus_tag="VLA74_00650"
     CDS             complement(2868..3200)
                     /locus_tag="VLA74_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49243.1"
                     /translation="MSTFSQKKYLEHLKLIKEAEDKVQTEIETHRKLVEEEINRLQED
                     FESTIETSKLEGKKIIEKSIEQARENATKEANKIIDDAKTKSKTISFHSDPQIIKNII
                     EILLSDIK"
     gene            complement(3206..3352)
                     /locus_tag="VLA74_00655"
     CDS             complement(3206..3352)
                     /locus_tag="VLA74_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49244.1"
                     /translation="MQNNKNNKRIFANAEQRKFYQIARAFKIGNILATIVIISIIGKY
                     FLGI"
     gene            complement(3342..>3977)
                     /locus_tag="VLA74_00660"
     CDS             complement(3342..>3977)
                     /locus_tag="VLA74_00660"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016471 - vacuolar proton-transporting
                     V-type ATPase complex [Evidence IEA];
                     GO_function: GO:0008553 - P-type proton-exporting
                     transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit D"
                     /protein_id="HSF49245.1"
                     /translation="LEYIRTKRRILIAKKGLKLLKLKRQALILEFFNTSKTAAALRGN
                     LQSELIKGYETIRMAEMLAGSMRLENEAMKMSQMANLQVLSKSIMGVHIPKIVGGQKN
                     LLAEHLLELPTSINESIRVFQRIHNIVLEIAEKETALRKLLYEIERTKRKSNAIENVF
                     IPKLLSALKFITFRLDEMERDTFIMLKTVKRKMGERQEIISKEAEVEINAE"
BASE COUNT         1343 a          639 c          540 g         1455 t
ORIGIN      
        1 atcttatcaa atgttaaaca tgtcgttctg ctccaataat aatgataata tatggtaata
       61 gaatctggtt aataccttta tctataccaa agataatatc tatattgatt gtcttgtacc
      121 ttattacata actcctgttc cgatctatca gctaggtttt attctagact tgatttatga
      181 caaattggaa attatataca atgatctagt aaaaaataaa taagatatta ctagattttt
      241 aataacaaag aaaaaaacca gcaaagaaga atgaaaaaaa gaaagtagaa aatttgtata
      301 tctaacctcg tcaatttgtt tggttatgtg acaataattt ttatccatca tatgtaaaaa
      361 gactaaaagt atgtatgaac ttttgtagaa aaaaggctga tttatattcc ttattaaagt
      421 aacataaaaa gaatggttaa caagttgata tcatattgag tataataaag taatttattt
      481 tctagtattt taattttgtt atattcaaag acaaagtaaa gtttggagaa aatcatggta
      541 taaaatatta ggaaattaat tggtagatta atcaaatttg aataagtgaa tctgataata
      601 attagatttt ttaaaagaaa taaagatctt attaaatata gactcataag gttattttat
      661 attatttatt taataataaa ttataaactc ataggattta gaaatatata gattatttat
      721 ttttagtaat ctatacaagc attcattttg atacattaaa aaacttatcg ttaatgtatt
      781 gaattaataa ataataatta tacaaacgta aaaaaaatta tcatttctat tttctctctt
      841 caatattata ttgatcaata gtgaactttc ttttgcttcc aaacggttta aactgccttc
      901 cactaccgtg ataaaatttg gagaaaaatt caacataaat caatcttgct ccctgtattc
      961 ccggttcaaa gactccgata ataatattaa aaagatgacc tatgataaat atcataattc
     1021 ctaaaatact gtaagctatg gattgatcta aagatcgaag aaatataaag tcaataacat
     1081 gagccagtat aactgaggca agcaatattc ctacaattct agtatatgaa agtatgtgac
     1141 taattataga cggcaattcc ataagtgctc taaccccttc tccatagaac atcaaaccaa
     1201 ctcctccaaa aattaacgca aagtatgcaa taccttgcac agaatctaat ggattgatat
     1261 ttacatggtt tataagagct aatccaatta aggcaatacc ccagccaaat aatagccagc
     1321 cgactttact aattacatgt tttatgagac cttctcgcag actgttaagt attcccaata
     1381 caagtccaaa agaaaccata cccaatccaa tatatccact aagtagcaat agtttacgta
     1441 aaccgaatgt tccaatagga tttaaaaacg caccttcatg gggtaagttt aatccaaaag
     1501 tatcatttaa gtatgaaaaa agataagcat ttagatgaaa tccaaaataa aggtcaaata
     1561 aaaatcccaa tataatagta ataatacaac ctggaatcat aactttggct agtttcacca
     1621 tttgagtagg gcgtaatatt gtcttggcaa aatttcttaa aaatctcggc ataatgttta
     1681 gatcacgttt tccaccttgg acccttctta ttacccatag agaaacaaga agtattacta
     1741 atccatatcc tacatcacca atcattaagc cataaaatat aggaaaaaat aatccaaaaa
     1801 tcaaagttgg atcaaattct gttccagatg gcaaagagta gaatcgaata aaggattcaa
     1861 aaactttaaa tctttttgga ttttcaagaa gcgtaggcgg actttcttta gtctctaatt
     1921 catatatgag agttccttca ctatactttg aaaatgctgt ttttacattc tctaactttg
     1981 atctaggaat ccaaccttcc aatgcaaatg catcattagt acctttcagg ttttctatta
     2041 cttctagttt tttattttct atttctagct gctcttctgc acctttcaga aatgtataat
     2101 gtgactttga aatttcagtc aattgaaggt taatttggtt taattttgaa gaaaggtcat
     2161 tataaatttt ttgctgatcg tgaataattt ctcttggttt tcctttgagt tttggtactg
     2221 attctagatg tactccatgt acattgaccg ctgaggcaag tatatctgaa ggtaaatgtg
     2281 gaggaataac caaaacaaaa taggtaagtt ttttctcttc ctgagaatat aatataatag
     2341 gtatgtcttt tgattctaag gtatttttaa atgcatctag cttttctgtc gcaactcgac
     2401 caaaaaatga tcgtgcaaag gataggttta aaatttttaa atcttcagga aaaaacgaaa
     2461 attcttcaag gagtttaata ttattttcgg ctgctttcat ttctgtcaac agattttctt
     2521 tttctctttc taatgatgca atttgaccat cgatatctat tgatttgatt gttttaataa
     2581 gttcctcaaa agaagaaaaa ctagtttttc tttgtacagt tgttgatgga agggtattaa
     2641 tcaatcctct aacccgaagc aattgatctg aaatttctct gtgtaaatca ctttcatgct
     2701 cactcatgag aaatgaatcg gcttctttgg aaagcggctc tagttgaata acattcattt
     2761 catgtaaaat cgatataatc tgctgtctat atttttttag gcctattact gctattcgag
     2821 ccattggagc aggtttgagt aatgtactca tcttccagta cctctcctca ttttatatca
     2881 gaaagcaaaa tttctattat gttctttatt atctgtggat ctgaatgaaa agagatggtt
     2941 ttggatttag tttttgcatc atctataatt ttattagctt ccttggtagc attctctcta
     3001 gcttgttcaa tgcttttttc tattattttt tttccctcta gttttgatgt ttcaatagta
     3061 ctttcaaaat cctcttgtaa acgattgatt tcctcttcaa ctaattttct atgagtttca
     3121 atttctgttt gtactttatc ctcagcttct ttaattagtt tcagatgttc gagatacttt
     3181 ttttgcgaga atgtagacat atcttctata ttcctaaaaa atattttcca ataattgaaa
     3241 ttataacaat tgtggcaaga atatttccaa tcttgaaagc ccttgctatc tgataaaatt
     3301 ttctttgttc tgcatttgca aagattctct tattattttt attattctgc attaatctct
     3361 acttctgcct ccttggaaat tatttcttgt ctttctccca tctttctctt tactgtcttg
     3421 agcataatga aagtatctcg ttccatttca tctagtctaa aagtaataaa ctttaatgcg
     3481 gacaacaatt ttggaataaa gacattttct attgcattag atttacgttt agtcctctca
     3541 atctcataga gaagttttct taaagccgtt tccttttctg caatctctaa cacaatatta
     3601 tgaattctct gaaaaactct tattgattcg ttgatagagg taggcaactc taataaatgt
     3661 tcagcaagta aatttttctg acctcccaca atcttgggaa tatgaacgcc cataatactc
     3721 tttgacaaca cttgtaaatt tgccatttgt gacattttca ttgcttcatt ctccagtctc
     3781 atagaacccg ccagcatttc agccattcta atggtttcat atccctttat taattcagac
     3841 tgtaaatttc cacgtaaagc agctgcagtc ttgcttgtat taaaaaattc aagaattaat
     3901 gcttgtcgtt ttagctttaa aagttttaaa ccttttttag caataagaat tctacgtttt
     3961 gtacgaatat actcaag
//
LOCUS       DATIAS010000033         3182 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_961529, whole genome shotgun sequence.
ACCESSION   DATIAS010000033 DATIAS010000000
VERSION     DATIAS010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961529"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(289..516)
                     /locus_tag="VLA74_00665"
     CDS             complement(289..516)
                     /locus_tag="VLA74_00665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49246.1"
                     /translation="MKPRFKKDNIPRLVKRFIKVYPEDEPPFCYLLCDVETGLVYESS
                     GEKQMCKEHKTQIKYNMDTHRFYCLDNKIRE"
     gene            800..2032
                     /locus_tag="VLA74_00670"
     CDS             800..2032
                     /locus_tag="VLA74_00670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49247.1"
                     /translation="MSKPIENEENLHLSVKEAFNRGIIRGQSQSNFFDFFDFIGNPFD
                     PSILINNHKQIVKSTRIIITKLAERIGACHKNERHLILVGPECSGRTTILKIIENFLN
                     KGFNENFSLYVNASDRWSGFSTEEVENDENSDRIDNFQQWIKEVDFHNSRIILVDDAD
                     SFISNAIQYCNAIRFDGFKIPTFIYCITNLTYSYIITNERLKKIFGDVFWLGIREEEE
                     IIKIILESTRNTLKSNTKQLTLFDDYSLDQIVNYSLGLPGLTSFFILSCLKMAYQANV
                     NKIERKIIERVAYIEGFTLAKKIVDRNLNLDGTKYKILVEILRQYYIDGERVERKKVI
                     SQFSNMARSTLAYHFKDLINENIIKQDRIGLRVYYTIQKPIRCALELIDLDSVEIERK
                     NESDAKKMVNIDSSIGDV"
     gene            2036..3070
                     /locus_tag="VLA74_00675"
     CDS             2036..3070
                     /locus_tag="VLA74_00675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49248.1"
                     /translation="MQSFNNQGNEVEFSSIFPFRINNIFPPNSSRFIEPIHTEETYNY
                     GSSDFDSAFRIFTDCLLQEPFHFEPNNYQSGYAIPSILNLKVVAIPYYEILDEIISQN
                     VTDKGKIGQVIQQTTNIKSQKLKYIIDANTFANGNIILVCKVKSVDEAHDFLSNYLKA
                     IGFKKNYKICDFIYNESASIMQQLLVSLYDYWPPNQSQITSIKIGGKTISANYSGRGK
                     YDLRLEEVNEEIKNRIINGDHIENITLKPSIGITGTRFRKSVPKITINEQGIINCKAN
                     INFENFIIVKWFIEETIRIIKQLNKDKKPKPSYSKLEDFFTTDTYSLKDSDISIYDNS
                     LKINNNKNLS"
BASE COUNT         1223 a          422 c          449 g         1088 t
ORIGIN      
        1 ataataatat tttaagaatt taaaggataa aaattaagat aactctttct caatatcgaa
       61 agatttatcc tttctttttt atttgttatt tgttattaat cgctctttct gccaccaccg
      121 tgagatgctt ttccaccttc acttgcaact ctttttcttg tcttttcatc tggagaggct
      181 aaatcctcta ttgtcattat tactcattgt gcaagctatt ggtatatagt taatataata
      241 gttagagaca aattttttat tagtatattt aaataagata ttattatatt attctcttat
      301 tttgttgtca agacaataaa agcgatgagt atccatatta tattttatct gtgtcttgtg
      361 ttccttacac atctgtttct caccacttga ctcatatacc aagccagttt caacatcaca
      421 tagaaggtaa caaaaaggag gttcatcttc aggatatacc ttgataaaac gctttactaa
      481 tctaggaata ttatcttttt tgaaacgagg tttcattccc ttttctttat aaaatcctgg
      541 agtttattat taacaggttt cttcaatttt ttcttgttct tttcaatttc taaatatata
      601 agtaataaaa ttaataacta aaatttagaa gcaaatttta agatcagttt agaagcaaat
      661 tttaagatca gagtaatatt tatgagtttt tttaatatta aattttttac tgatgctaat
      721 actacaataa aaagcatttt ttatagaaaa ctttatacta accaagttct attaagtcaa
      781 tagagtcgag aaaatcgaat tgtctaaacc tattgagaat gaagaaaatt tacatttatc
      841 agttaaagaa gcttttaatc gaggtataat aagaggtcaa tctcagtcaa actttttcga
      901 ctttttcgat tttattggta atccatttga tcccagtatc ttaataaaca atcacaaaca
      961 aatagttaaa agtaccagaa tcataataac taaattagct gaaagaatag gtgcttgcca
     1021 taaaaatgaa agacatctta ttttagtagg tccagaatgt tctggtagaa caacaatctt
     1081 gaaaataatt gaaaatttct taaataaagg ttttaatgaa aatttttctt tatatgttaa
     1141 tgcatcagat agatggtcag gattttcaac agaggaagtg gaaaatgatg agaattcaga
     1201 cagaatcgat aattttcaac aatggataaa agaggttgat ttccataata gtagaataat
     1261 tcttgttgat gatgccgatt cattcatttc aaatgcaata caatattgca atgcaataag
     1321 attcgatgga tttaagattc caactttcat ctattgcatt actaatttaa catattcgta
     1381 tataataacc aatgaaagac taaaaaaaat atttggagat gttttttggc ttggtataag
     1441 ggaagaagaa gaaataataa aaattatcct tgaatctaca agaaatacgt taaaatcaaa
     1501 taccaaacaa ttaactttgt ttgatgatta ttctttagat caaatagtta attactctct
     1561 tggattacct ggattaacaa gtttctttat tctatcatgc ttaaagatgg catatcaagc
     1621 taatgttaac aaaatagaaa gaaaaattat tgaaagagta gcatatattg aaggattcac
     1681 tttagccaaa aaaattgtag atcgaaactt aaatttagat ggtactaaat ataagattct
     1741 agttgaaatt ctaagacagt attatattga tggggaaaga gtagagcgga aaaaggtcat
     1801 ttctcaattc tcaaatatgg caagatctac tcttgcttat cattttaaag atttgattaa
     1861 tgagaatata atcaaacaag accgtatagg actgcgagtt tattatacta tacaaaaacc
     1921 tatcagatgt gcattagaac taatagattt agattcagta gaaatagaga gaaaaaatga
     1981 atctgatgcg aagaaaatgg taaatattga ttcaagcatt ggagatgtat aagaattgca
     2041 atccttcaat aaccaaggaa atgaagtaga attttcttct atttttccat ttagaatcaa
     2101 taatattttt ccacctaata gttctaggtt cattgaacct atacatacag aggaaacata
     2161 taattatggt agttcggatt ttgattctgc atttagaatc tttacagatt gtcttttaca
     2221 agaaccattt cattttgagc ctaataatta tcagtcaggc tatgcaattc cttctatttt
     2281 aaatctcaaa gttgtggcaa ttccttatta tgaaattctt gatgaaatta taagtcagaa
     2341 tgtaactgat aaaggaaaaa taggtcaagt aatacaacag acaacaaaca ttaaatctca
     2401 aaagttaaaa tacatcattg atgcaaatac ctttgcaaat ggtaacataa ttttagtttg
     2461 taaagtcaaa tctgtagatg aggctcatga ctttctttcc aattatttaa aagcaatagg
     2521 atttaagaaa aattacaaga tttgtgattt tatttataat gaatcagcta gtattatgca
     2581 acaattactt gtatctctct acgactattg gccaccaaat cagagccaga taacatctat
     2641 aaaaatagga gggaagacaa tttcagctaa ttattcagga agaggaaaat atgatttaag
     2701 gttagaagaa gttaatgaag aaataaagaa tcggattatt aatggtgacc acatagagaa
     2761 tataacatta aaaccgtcaa ttggcattac aggaacaaga ttcagaaaat ctgtaccaaa
     2821 gatcactata aatgaacaag gaattattaa ttgcaaagca aatatcaatt ttgaaaattt
     2881 tatcatagta aagtggttta ttgaagaaac tatccgtata ataaaacaac taaataaaga
     2941 taaaaagcca aaaccatctt attcaaaact tgaagatttc tttacaacag acacatattc
     3001 tctcaaagat tcagatattt caatttatga taattcacta aaaattaaca ataataaaaa
     3061 tctttcttag ggagaagatg tttgataaat aacgatttca acgcacagtc taaaaataat
     3121 actgatataa atataaccaa taacaatatt gagaatgtca attctggcac tgatactttt
     3181 gt
//
LOCUS       DATIAS010000034         3275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_7787, whole genome shotgun sequence.
ACCESSION   DATIAS010000034 DATIAS010000000
VERSION     DATIAS010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7787"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VLA74_00680"
     CDS             complement(<1..481)
                     /locus_tag="VLA74_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49249.1"
                     /translation="MAPAISNSNLSYGQDFEESSDEESYDDEESSDDDDEDSSDDDDE
                     DSYDDGDSYDDDDGDSSDDEDSSDDEDSSDEDNEATNLDYYSPQSDLLGSQVDTTDSQ
                     QLLDFQLPATGCQSDEQYNPQTGNCEPTCSSDEQYNPQTGNCEPTCSSDEQYNPQTGN
                     "
     gene            1522..2622
                     /locus_tag="VLA74_00685"
     CDS             1522..2622
                     /locus_tag="VLA74_00685"
                     /inference="COORDINATES: protein motif:HMM:NF017773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49250.1"
                     /translation="MVTSELESFSQVSPNIFEKIYADTKSNLSYNLPIVSTRGDFDLT
                     NGKLIGYSPIAYKSSNIPGLQNDVCPQEPNKTAIYIHGFGVNGKTYASENALEIFSRV
                     NMSLYKSLNNNNNITLNNIGFNWDSDITNKEKGWEIAKDVAKNNGLKLAQFILDFKNK
                     CPDTDIRLIAHSLGSRVVLSSIDILSNHPEWNDKNFTVKSVHLLAAAVDDEEISKNAY
                     DIVKDPTNGYSMNVTELKYPSLDKLKTSFGQAIEEEVGRFYNFYSPKDDSLEFIYKLN
                     EKDNALGLTGAEDGISIPRNYNETDVQKELKPFCDADGHNSCDYPYNIVLNSIPSEGD
                     NHFGYIGFRYANGTLKDDGAMDVVMKNWLSAE"
BASE COUNT         1212 a          448 c          470 g         1145 t
ORIGIN      
        1 agtttcctgt ctgtggatta tactgttcat ctgatgaaca tgttggttcg cagtttcctg
       61 tctgtggatt atactgttca tctgatgaac atgttggttc gcagtttcct gtctgtggat
      121 tatactgttc atctgattga cagccagtag ccggtaattg aaaatctaat agttgctggg
      181 agtcagtagt atctacttga gaacctaata gatcagactg aggagagtaa taatcaagat
      241 tcgttgcttc attatcctca tcagaactat cttcatcatc agaactatct tcatcatcag
      301 aactatctcc atcatcatca tcgtaactat ctccatcatc gtaactatct tcatcatcat
      361 catcagaact atcttcatca tcatcatcag aactctcttc atcatcgtaa ctctcttcat
      421 cagaactctc ttcaaaatct tgaccatatg acaggttact attacttata gcaggtgcca
      481 taattaaaaa aaaagataaa aaaattaaaa aaataatatt tttgcattta gtatacaaaa
      541 aagctatttt attattttta tacttagttt gaaataataa tataatatta acaatagata
      601 aaataaatct agttgttaaa gatgaaaata tcattattat ctcaatataa ttagttatcc
      661 ataattctat ttaggatttt tgatgatgtt attcgaaatg cataaatttc gagaaatagt
      721 attgttcgtc attgttggta ttaatttttt tagcataatc aaatacaata tatttcgatt
      781 ccttaaaaag atctattatg acggtaactt ggaatagaaa aacaataaca aagataattt
      841 tagttgctgt tgtttatggt ttatagttca atattctgga ttcaacagct tactagaaag
      901 ataaaacata tccaaaagat tttattcctg tgtgggaaat attagtaata ctaacttata
      961 tcgatttttg ctttgttgaa tacatttaaa agtcatttcc tgttatctat tatcttatcc
     1021 aactagcaaa ccccttgttg cgtatgatct gtctacggta aggttttttc tgttgaatgg
     1081 ggatatgtgt aagctgtttg tatatgtgaa ccatataatg agctttgata gatgtttgca
     1141 aaattattct gaatacgaaa tgataaatcg atatcacaga aaaacacgac ttgaatattt
     1201 gataaataga gtaaagaatg atttaaaaga attagatcaa ataccctacg aatatcaaaa
     1261 acaaattaag ttaaggattt ttaaatatct acattaatca taataatttt tcggcgcctc
     1321 aaaagttttc taaaatattt tttaggtctt aaccttaaaa ggtataatta aattcagtta
     1381 ctatttcaaa ttatgttatt aaaggaaaga taaattatca atgataatat cattaatata
     1441 gtacaaaaat ttttgtttat tatgaataaa aagtcatcta taatttttgt attactttgt
     1501 ttttcagtta tatttgcatt aatggtgact tctgagttag aatcattttc acaagtttca
     1561 cctaacattt ttgaaaaaat atatgcggat acaaagagta atttgtccta taacctacca
     1621 atcgtctcta ctagaggaga ttttgatctt acaaatggga aattgatagg atatagtcct
     1681 attgcctaca agtcttcaaa tattccagga ttgcaaaatg atgtatgtcc tcaagagcct
     1741 aataaaacag ccatctatat acatggattt ggtgtaaatg gaaaaacata tgcttcagaa
     1801 aatgccttag aaatatttag tagagtaaat atgtctttgt ataagtctct aaataataat
     1861 aataatatca ctcttaataa tatcggtttt aattgggatt cagatataac aaataaagaa
     1921 aaaggatggg aaattgctaa agatgtagct aaaaataatg gattaaagtt agcacaattt
     1981 attttagatt ttaagaataa atgtcctgat actgatatta gacttattgc ccattccttg
     2041 ggttctaggg ttgtacttag cagcatagac attctcagta atcatccaga atggaatgat
     2101 aaaaatttca cagtaaaatc tgttcattta ctagctgcag cagtagatga tgaagaaata
     2161 tccaaaaatg cctatgatat agttaaagat ccaacaaatg gatatagcat gaatgtaact
     2221 gaattaaaat atccgtcgtt ggataaatta aaaacctcat ttggacaagc tatagaagag
     2281 gaggtaggac gattttataa tttttacagt cctaaagatg actcactaga gtttatctat
     2341 aaattaaatg agaaggataa tgctcttgga ttaactggag cagaagatgg aatatctata
     2401 cctagaaatt ataacgaaac agatgttcaa aaagagctaa aacctttttg tgatgcggat
     2461 ggacacaata gttgcgatta cccttacaat attgttttaa actcaatacc ttctgaagga
     2521 gataaccatt ttggatatat tggttttaga tatgctaatg gtactttaaa agatgatgga
     2581 gcaatggatg tagttatgaa aaactggtta tcagcagaat aataaaatta taactagtag
     2641 aatattttac ttatctcttt tattgttcaa atactttaac tggtcccact ttatagaagg
     2701 gttcaaatcc cacacattta gatgaataac agtactgaac ccatttgaaa ttagctggtc
     2761 ccatttaacc tttataatta agaatagtaa ggtaacatat tgaatacatc tatttaagta
     2821 tcgaatccat atcataaata ggaccaagta gatactaacc ctttcagtta tcttggtagt
     2881 aatcattcaa ttgaattcat ttaaaactaa aagtaattac attatttaat cctaaaatta
     2941 aatttatgca ttttggagat gatttttaaa acagaaaatg gaaacctgcg atcaatgctt
     3001 ccaatcgcta gtaatttatt caaaaaggca ataaaaaata attcacgaat catagaggtt
     3061 agatcgaatt aaataatcat tttttacatt ctagaaaaca aattatgtaa aaaatcatta
     3121 tagaaaatag tgaaataatt ctatcaaatt gaaaaataac catatctttg agcaaattca
     3181 tattgatgat aacaagattc ataatatatc tacagtattt cattttttct taaataaata
     3241 aatttattat atataatatt gcttaatata tactg
//
LOCUS       DATIAS010000035         2513 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_825495, whole genome shotgun sequence.
ACCESSION   DATIAS010000035 DATIAS010000000
VERSION     DATIAS010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825495"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(645..1724)
                     /gene="amrS"
                     /locus_tag="VLA74_00690"
     CDS             complement(645..1724)
                     /gene="amrS"
                     /locus_tag="VLA74_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HSF49251.1"
                     /translation="MQSSNTVLGKEAELAMKVDNDRIKCTACARYCQIPEGKIGLCGI
                     RGVVDNKLFLFSYGRVISGNIDPIEKKPVSHYMPGTSIYSIATTGCNWLCKYCQNYDI
                     SQRRKIEGIEMSPYKVIETAKKYGVEGIAYTYNEPSIFMEFAKDCGLQAHKNNIFNIF
                     VSNGYLTPESVNMAKSFLDCITVDFKGSGEQSFVKKYIGIPSSDPIFQSLKEIKNHTD
                     IHIEITDLIVPEVGDDLIAARKLCKFIYDELGDETPIHFLRFHPDYKMMEFPFTPIET
                     LEKHCDVARNEGLKYVYIGNVPGHKLEHTYCPECGMIAIQRHGFDIISWNLDKKNRCR
                     NCSNHISIIGKPKKIGIRNRFQIIN"
BASE COUNT          842 a          409 c          353 g          909 t
ORIGIN      
        1 tttgagtacc cataccagta agagtaattt tagtatcgtc gatttccttt atagcatcat
       61 atacagctgc aatgtcttta ctcatacctg ttgttttatt atttaggcgt attggtatta
      121 tactaatttc tgcagtaatt accattttgt cattcaattc ataaataata tgttactatg
      181 aatatttata ccaatatttt atatttactt gaataggtca agattttaag gcaattaatg
      241 tattttgtat agttatacta agaaattatg aatataaaaa gtattaaaat ccaggtaatg
      301 ctctattttt gcaagacttg aacaacattt gtattagaat aaggcattca cagctaaatc
      361 tattttctta tattaaacgc tgccagttaa gacaacagga tgtagtatca tgttttgtat
      421 gaccaccatc tttcttagaa gtgctgcaga ggaaattgat aaacttggcc caccgtaata
      481 taaagtgaaa gaatgttgta tacctgcggg attcaactat actaaaaaaa tttttctaga
      541 agatccattt aattcctaat ataaaattac agggtgatat ttatttaatg actgttttat
      601 ctatttctaa tattttacta gctacttatg tttttcaaca tcaattagtt aataatttgg
      661 aatctatttc ttattcctat ttttttaggt ttaccaatta tcgagatatg gttagaacaa
      721 tttctgcatc tattcttttt atcaagattc cacgaaatga tatcaaatcc atgacgttgt
      781 attgcaatca ttccacattc tggacaatag gtgtgttcta gtttatgtcc aggtacattt
      841 ccaatataaa catattttag accttcattt ctagcaacat cacaatgctt ttcaagtgtt
      901 tcaataggag taaatggaaa ttccatcatc ttataatctg gatgaaatcg taaaaaatgt
      961 atcggcgttt catcccctaa ttcatcatat ataaatttac ataattttct tgcagctatt
     1021 aaatcgtcac ctacttctgg aacaataaga tctgtgatct cgatatgaat atctgtatgg
     1081 tttttaattt ctttaagaga ttgaaaaatt ggatcagaag aaggaattcc tatatacttc
     1141 ttaacgaaac tttgttctcc actaccctta aaatcaacag ttatgcaatc taggaagctt
     1201 ttagccatgt taacagattc aggagtaaga taaccgttgg agacaaaaat gttgaaaata
     1261 ttatttttgt gtgcttgtaa tccacagtct ttggcaaatt ccataaaaat tgatggttca
     1321 ttatatgtat acgcaatccc ttctactccg tatttttttg cagtctctat tactttgtag
     1381 ggtgacattt ctataccttc aatctttctt ctctgagaga tatcgtaatt ctgacaatat
     1441 ttacataacc agttgcaacc agtagtagcg atcgaataaa ttgatgtccc aggcatataa
     1501 tgtgatacag gttttttttc gatagggtca atattacctg aaataactct cccgtaagag
     1561 aatagaaata atttgttgtc gactactccg cgaattccac ataatccaat ttttccctct
     1621 ggtatttgac aatatcttgc acaggcagta cattttattc tgtcattatc tactttcatg
     1681 gccaactccg cttcttttcc taaaaccgtg ttacttgatt gcaatttgta tattgttact
     1741 gtatataata aacgatctta aaaatgttaa aaaaagttat ttttctatat aaagtcaata
     1801 aattatttac aattattttt gaaagttttt tttttttggt tatatttcca tattagattt
     1861 ctaggcaagg cagatatcct aatcaactgt caatcaggta atgaaatcgt tgttgctaaa
     1921 aagtataaag tctatagata tataatgtat taacatgtaa tataatttat agaatctagg
     1981 atactatagt cgaaataata tttgacacaa tcgatcaact agagaacata gttcctgcgt
     2041 ttttccaaat gtatattcgt tcatatcctg tatctataac gagaatcttt tagtctcata
     2101 tatgctgata aaagacactt cgtaatcaac aataaacact ctagaaactt atcaatcaat
     2161 caaaccataa aaacaagaaa cttagagctt atcaaaagaa tgataggaac atatccagca
     2221 agtacgggta cagacttaca acatcatctg gaccatcttt aacaatttat cgtttactta
     2281 taaacagatg aaaatacgaa ctgtttgaca ttctatcaat ctatctaact ataaccatct
     2341 ttaaaaaata attttagttg atatagtagt tggagagatg gatagagcaa gcattgtgca
     2401 aatgatgata tccgtcctaa tggagctaat gactagatat ccgtccgtca cttacagttc
     2461 tttttccctc caacaccacc gaaataagtg taaaaatctc gatagtgggg aaa
//
LOCUS       DATIAS010000036         8411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_689116, whole genome shotgun sequence.
ACCESSION   DATIAS010000036 DATIAS010000000
VERSION     DATIAS010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8411
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689116"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..379
                     /locus_tag="VLA74_00695"
                     /pseudo
     CDS             71..379
                     /locus_tag="VLA74_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(686..1072)
                     /locus_tag="VLA74_00700"
     CDS             complement(686..1072)
                     /locus_tag="VLA74_00700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49252.1"
                     /translation="MSTTIKNKNYMKRYPVFIISLSTVATIFVSFSLISQQTYAEDYK
                     LNISIKNDDGANTKADLSIKTDDDTEETTVKLNEDSENIKEEISGNPGDKVKVCLEDD
                     DFKDCQTKNLSKDEDSTLKFKLEYKA"
     gene            complement(1897..2484)
                     /locus_tag="VLA74_00705"
     CDS             complement(1897..2484)
                     /locus_tag="VLA74_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49253.1"
                     /translation="MSNQKTESNNKQIKNKREEETNKIVQEQQQEEEQQTQQIKGDTI
                     ATTSTISSTKNEVTISKINDNQKIDKTFFDKRLEITNRYQQQIIKAIKATTDNYNQLQ
                     KNILNTYQSAFSKFINNAPDNNKSCNFAVLEQVKVYSKINQSIIDSAINSTRTIHEFL
                     AEYTEIFNKSIELGQEYYYSDEIKNYFKFKRIERI"
     gene            2625..3533
                     /locus_tag="VLA74_00710"
     CDS             2625..3533
                     /locus_tag="VLA74_00710"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HSF49254.1"
                     /translation="MFTLTTSLPDESWCTSLLRKIRWNDYVICPRCQSYNIKKDGLYR
                     SYQKYFCKQCDRGFNDKTGTVFHYSHIPLKTWFLAMYLYFVLWPGCSIREISLEVVVP
                     YPRCYRFIRTIMEKISSSSPYTKLDGKVESDEFYIKAGLKGRSYHDEIVKSAGRKPRK
                     RGLKPWRGRGTFYKDHPMITCIHQRNGSTYFDVPLLQSLLDIVCTRVQYGSTIFTDEY
                     RAYDQLEEHGFVHRSVIHSQKEYADGIVHVNNCECRSNLYQLWIRKFMGVNRYNLQTY
                     SKTFQFIHNNRTKRREQRFMEILCYQ"
     gene            3952..5001
                     /locus_tag="VLA74_00715"
     CDS             3952..5001
                     /locus_tag="VLA74_00715"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49255.1"
                     /translation="MRDINNNGCTNPIYNGHIMLLYEDKNKRNNLIIDYINEGLKNGC
                     LCIYASVDLDNSTDISLIDSLSSRIINYEENIQNENLQFINFKSYYQSVLKGDLTPFE
                     NLKAKLEDTLPKRLSEGKKDKILVFADAACHLSETRNFNECIVLEKWWQDANLDWARN
                     NKNITVVCPHPNYVFKEESEHKGIKNKISDSHDTTIDIEDEHYLQYFYDLIHQNRQIR
                     ILIAESESDLRSVYQVYLNEYLKDMGFEVVVVKSGSECIEYLLDSKDKGKEEGGFDIV
                     ILDSHLPDIKGIDVIKQIRKEMPNQRIVFTTTHSFSEIKNIIDSCRINKRDILLKPFY
                     FTKLLSIINPLVTIK"
     gene            complement(5267..5671)
                     /locus_tag="VLA74_00720"
     CDS             complement(5267..5671)
                     /locus_tag="VLA74_00720"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49256.1"
                     /translation="MIFIVIVQNYAISLDNKKRILVVDDEPDICLVLKIVLEKAGFLA
                     DYYYNAILALDEFKSNFYDLIILDIQMPDINGLQLCREIRKRDKKVKICFLTATETIF
                     DIEYKFTPVYTFIRKPIENKELIRIINDLLNN"
     gene            5857..7008
                     /locus_tag="VLA74_00725"
     CDS             5857..7008
                     /locus_tag="VLA74_00725"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HSF49257.1"
                     /translation="MSIKKMTVIIFNIGITIFCILLLFYYSPQLINNNNVAFASPSSS
                     DKTVSIMAVGDSIGYNINHEDLTNLETIIHQNTDIFIFNLEGLLAKDSSFLDNNHSIE
                     DCKGFPSYQSTFVTDSTFVDYLKLASITIANLANNHVFDCGPKGIEETKRVLMEKDIL
                     SVGAGQNLKEACEPLVIQSNKGLRIVFVSYNFILEDLVSAQTNRAGGASIDNCNHDYD
                     KIRLQNQADLIIASIHLGIWSPNVSKEQIDVVQYLFDSGVDIVIGHSPHIPQAILKTT
                     TTDEGGKEEEKLAFFNLGNFILRPDYNMPSEAHITIVPELDIDTESNLMSVTIYPVTI
                     DNEGIPHLEERWNNGIINKVTKTSAEGFGTSINIRENIGQISVKLQHLE"
     gene            7419..8276
                     /locus_tag="VLA74_00730"
     CDS             7419..8276
                     /locus_tag="VLA74_00730"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF020227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSF49258.1"
                     /translation="MSKEKIALVTGCSTGIGYITSLTLARNGFYTYATMRNLDKSANI
                     KEISSKESLPIEVLQLDVANDESTKNAMEVLKAEKNRIDVLVNNAGYGLIGSIEEISI
                     KELKAQFETNLFGMVRMIQSALPLMRNQKESGRIINLSSIGGILGYPLSAAYSSTKFA
                     VEGLIESMRYEVEPFGIKTILIEPAFVIDTNFHNNVKVPEKTTSGSYSSPYKEFTQKL
                     FENYWNVQNEYQTKAEDVAKIILEAAISDNPKQRYQVGKYSEMMVKTKYTYSDSECKN
                     IMQKQFFSQ"
BASE COUNT         3112 a         1096 c         1231 g         2972 t
ORIGIN      
        1 agtggtttgc agaccaccac caccataacc atcatcatca tcatctacaa taaataccca
       61 acaacaacaa caacacatct gtcttgacaa gggttatgac tatcctgaag tatacgagtt
      121 acttgaagaa tatggttata ctatgcatat ttgtaagaga ggagaagact acaataatgg
      181 taacaaaata aagaagggaa aaagaagaat gataccaaaa tacagagcaa gaagatgggt
      241 agttgagaga acacactcat ggatgaatag attcaggcga ttattgatta gatgggaaaa
      301 gaaggaggat aactatattg caatattaca ttttgtctgt gcttggataa catataatag
      361 aggaggtgtt ttcggatagg ctctaaatca accatgagct tcttatcttt gtgggtgtta
      421 tgtggcaaat ctaacaccca cctttcaaca tccaaagatt caacagaacc attttttata
      481 aacataataa gcaaagtatt atcaatcgag ttcatctaca tatacagcta gctagtctgg
      541 agtagagaat cttccatgta gtagggctaa ctgctattac ataatattta gcttttatta
      601 tttagaaact aaaatttaag taatatatta aattaccaat taataaaaaa ttatgatgtt
      661 ttaaattatt attaaaatct tattcttaag ctttatattc taatttgaat ttgagagtgc
      721 tgtcttcatc ttttgacaaa tttttagtct gacagtcttt gaaatcatca tcttctaaac
      781 atactttaac tttatctcct gggttgcctg atatttcttc ttttatattt tctgaatctt
      841 catttaattt tactgttgtt tcttctgtat catcatctgt tttgatagac aagtctgctt
      901 ttgtgttggc accatcatcg ttttttatcg atatatttag tttataatct tctgcataag
      961 tttgttgaga tatcaaagaa aaggaaacaa agatggttgc tacagttgat agagatataa
     1021 taaagacagg atatcgcttc atatagttct tattctttat tgtagtactc ataattctta
     1081 ttagttatta ttttataaga atatttgaaa acacatattt agaaaaaaat tctatatcaa
     1141 atacagaata ttattctaat tttcttaaat cataatatct attatttaga taatgatatg
     1201 cataattata aaatgtaatc attaagataa tctttttttt ataaaaattt ttttctccca
     1261 aaaaaatctt tagaaagtat tattgtattt gatattgtca tatgaaatgt ttatctctta
     1321 aacaaccttt cgcagaccta ctataccact tagcatatat tttctaatca aatcgctttt
     1381 ggaatgcttt aaagtatttt aacattgcat atattaaaca cgatagcaaa tattttttcc
     1441 tgtttatatg atattataag taaatagaat tagaaaatat aggctaattg gtatagctcg
     1501 gtgaaaagac aatagagtta agaaaatgga gtaccaaatt tagaggtaaa tttcttgttc
     1561 atgcttcaaa aaatatagat atagaagctt gtgaaagact agatattgat attgatacga
     1621 ttacaaaagg tgcaataatt ggttctgctt ttttatatga tgttaaagag tataaaaaaa
     1681 gaagagttta acaaagataa acaaaaacat ttttctattc tattattagt aaatattttg
     1741 atggatacaa atacggtttc ttagttaaag atgctagaat gtttaaagaa tcggttccct
     1801 attcaggtaa acttgagttc tttgaagttg atgattctat aataatatga attcataata
     1861 aattcatttt gatattttaa caataagaaa ttggttttaa attctttcta ttctcttaaa
     1921 tttaaagtaa tttttaattt catcactata gtagtattct tgtccaagtt ctattgattt
     1981 attaaatatt tctgtatatt ctgctaagaa ttcatgaatt gttctagtac tattaattgc
     2041 actatctata atgctttggt taattttgct atatactttt acttgttcta aaactgcaaa
     2101 attacaagat ttgttgttgt ctggtgcatt atttataaat tttgaaaatg ctgactgata
     2161 agtattaaga atattctttt gtaattggtt atagttgtca gtggttgctt tgattgcttt
     2221 aataatttgt tgttgatatc tgtttgtaat ttctaacctt ttatcaaaaa atgttttgtc
     2281 tattttttga ttatcattaa ttttactaat agtaacttca tttttagtac ttgaaatagt
     2341 ggatgttgtt gctatagtat ctccttttat ttgttgggtt tgttgttctt cttcttgttg
     2401 ttgttcttgt acaatcttgt tggtttcttc ttctctttta tttttaattt gtttattatt
     2461 gctttcagtt ttctgattag acatttttgt cagtaatttg tataatgaag tatttaacaa
     2521 attctaataa attagaatgt taaaagtaaa ttattgatat tatcttcgct cttatttctg
     2581 aatgtttcag ccaaccttaa agctggataa cacctaatta agatgtgttt acattaacta
     2641 cctctcttcc tgatgaaagt tggtgtacca gtttgctgag aaagattaga tggaatgact
     2701 atgtaatatg tccacgttgc cagtcttata acataaagaa ggatggtctc tacaggtcat
     2761 atcaaaagta cttttgcaag cagtgtgata gaggattcaa cgataaaact ggtaccgtat
     2821 ttcattattc acatatacca ttaaagacat ggtttttggc aatgtatcta tactttgtac
     2881 tctggcctgg atgttcaata agagaaatat cgcttgaagt agtagtacca tatccaagat
     2941 gttacagatt tatcagaaca attatggaaa aaatatcttc ttcctctcct tacactaaac
     3001 tcgatggtaa ggtcgagagc gatgaattct atatcaaagc aggactcaaa ggtagatcgt
     3061 atcatgatga gatagtaaaa tcagcaggac gaaaacccag aaaaagagga ctaaaaccat
     3121 ggagaggtag aggtacattt tacaaggatc atccaatgat aacctgtatt catcaaagga
     3181 atggatctac atattttgat gttcctttac tacagtcact tcttgatatc gtctgtacca
     3241 gagtgcagta tggttccaca atatttacag atgaatatag ggcatatgac cagctggaag
     3301 aacatggatt cgtacacaga agtgtaatcc attcgcagaa agaatatgct gatggtattg
     3361 tacatgtgaa taactgtgaa tgcagaagta acttgtacca attatggata agaaagttca
     3421 tgggtgtaaa caggtacaat ttacaaacat attccaagac atttcagttt attcataaca
     3481 atagaaccaa gagaagagag caaagattca tggaaattct ttgctatcag tagctgaaac
     3541 attcagaaat aagagcgatt atctttaata taattataaa aaattgatag tataaattta
     3601 ataataaatc gtcaatgaat tgttaattaa atatattctt catcttagca ttctaatata
     3661 taactagtaa tacgttggga tgatatggaa atttcagtac aattcctatt tacataaatt
     3721 gtaaataaca attaaattat ttgatattat ctagataaat tctaattttt acatatatta
     3781 tttagattga taaaatctat tatactataa cagatatatc tccaccacat tgtattagaa
     3841 taattgcaaa gcattttcta aacatataat tttattctaa acatataatg atattctaaa
     3901 tacaatgtgg tcgtactcat tatatactaa taatcataaa taaagactat aatgagagat
     3961 attaacaata atggttgtac taatcccata tacaacggac atataatgtt attatatgaa
     4021 gataagaata agcgtaataa tctcataata gattatatta atgaaggcct aaaaaacggc
     4081 tgtttatgta tatatgcatc tgtagattta gataattcta ctgatatttc tctgatagat
     4141 agtttatctt ctagaataat aaattatgaa gagaatatac aaaatgaaaa tctacaattt
     4201 atcaatttta aatcttatta tcaatctgta cttaaaggag acttgacacc atttgaaaat
     4261 ttgaaagcaa aattagaaga tacactgcct aagcgtttat ctgaaggaaa aaaagataaa
     4321 atactagttt ttgcagatgc agcttgtcat ttatcagaga ctaggaattt taatgaatgt
     4381 atagttttgg aaaaatggtg gcaagacgct aacctagatt gggcaagaaa taacaaaaat
     4441 attactgttg tatgtcctca tcctaactat gtctttaagg aagaatcaga acataaaggg
     4501 ataaaaaata aaattagtga ttctcatgat actacaattg atatagaaga cgaacattat
     4561 ttgcaatact tttatgattt aattcatcaa aatagacaaa taagaatact tattgcagaa
     4621 tcagagtctg atttacgttc tgtttaccaa gtatacttga atgaatattt aaaagatatg
     4681 ggatttgaag ttgtagttgt taaaagtggt agcgaatgta ttgaatattt attagattca
     4741 aaagataaag gaaaagaaga aggaggcttt gatattgtca tattagattc acatcttcct
     4801 gatataaaag gaattgatgt tatcaaacag atacgtaaag aaatgccaaa tcaaagaatt
     4861 gtatttacca caactcattc ttttagtgaa ataaaaaata tcatagattc atgtagaata
     4921 aacaaaagag atatactttt aaagcctttt tatttcacaa aattactttc tataatcaat
     4981 ccactagtaa ccattaaata aacatattga aaatctagaa taacaaaaaa atattataga
     5041 aatactatta gcttgtattt agcttttatt attagaaact taacaattta gttttttatt
     5101 agaaatagaa ataagaaata aaaatttatt cataagataa ttaatgaaaa cctaaatgtg
     5161 aatccatcta agcgatttgt tgctgtcttt gatttagatt ctggaactag aaaattttct
     5221 agttaatatt aatattacca aagaatcata actaatctta ctatttttag ttatttaata
     5281 aatcattaat tattctaatt aattctttat tttctatagg ttttctaata aaagtataga
     5341 ctggagtaaa tttgtattca atatcaaata tggtttcagt tgctgtcaaa aaacatattt
     5401 ttactttttt atctcttttt cttatttctc tacatagttg aagtccatta atatctggca
     5461 tttgtatatc tagtattatt aaatcataga aattagactt gaattcatca agtgctaaaa
     5521 tagcattata atagtaatct gctaaaaatc cagctttttc taaaactatc tttagcacta
     5581 aacaaatatc tggttcatca tcgactacta atattctttt tttattatct aaactaatag
     5641 cataattttg tacaattact ataaaaatta tttactataa caatttaatt aattaataat
     5701 aaagtatgtt gtaataatcc aaactaaagt tctaaaaaaa gactaacgta gagatactac
     5761 gacctttttt tagctttatt ctttgaaact ttgtttaaga agctttttgt tataattctt
     5821 attttcaatt ttataaatga ctaaattata attatattgt caattaagaa aatgacagtc
     5881 attattttta atattggaat aacaattttt tgtatcttac tgctcttcta ctactcacct
     5941 cagttaataa ataacaataa tgttgcattt gctagtcctt cctcttctga caagacagtt
     6001 tctataatgg cagtaggcga ctctatagga tacaatataa atcatgaaga cttaacaaat
     6061 ctagagacta tcatacatca gaatactgat atattcatct ttaatttaga aggactttta
     6121 gcaaaagatt cttccttctt agataataat cattctattg aagattgcaa aggttttcct
     6181 tcttatcagt caacttttgt gaccgattca acatttgtag attatctcaa attagcttca
     6241 ataactatag caaatttggc taataaccat gtttttgact gtgggccaaa aggtattgag
     6301 gaaacaaaaa gagtattgat ggaaaaagat attctttcgg taggagctgg acaaaatttg
     6361 aaagaagcgt gtgagccatt agttattcag tccaataaag ggctgagaat agtatttgtg
     6421 tcatacaatt ttatattaga agatttagtt tcggcacaaa ctaatcgtgc aggtggagca
     6481 agtattgaca attgtaatca tgactatgat aaaataagac tacagaatca agctgacctt
     6541 atcatagcat caatacattt aggtatttgg tctcctaatg tgagcaaaga acaaattgat
     6601 gttgttcaat atctttttga ttcaggtgta gatatagtaa taggacattc accacatata
     6661 ccacaagcaa tattaaaaac aacaacaaca gacgaaggag gaaaagaaga agaaaagtta
     6721 gctttcttta atctaggtaa ttttattctt agacctgact ataatatgcc ttcagaggca
     6781 catataacta ttgtaccaga gttagatata gatacagaaa gcaatttaat gagtgtaaca
     6841 atatatcctg ttacaattga taatgagggt atacctcatt tagaagaaag gtggaataat
     6901 gggataataa ataaggttac caaaacttct gcagagggtt ttggcacctc aataaatatc
     6961 cgtgagaata taggtcaaat atcagttaaa ctacaacatc tagaataaat ttatctttat
     7021 aacaaattaa tttgaaaatg gaagaagata aaaatctata tttgaaatat gatgcttttt
     7081 tgtttaattt ttaatacact taacatatac tataattttt atctatctag acattttctt
     7141 ctattgataa attaaaagat ttaattgata tttgcaaaac agaattcatc tacatattga
     7201 gataagctac caggaataga attgtccatg tagtaggatt ctactacctt gtatttagct
     7261 tttattatta gaaacttatt ttaaaatcat tgtttaatct aataaaaata aatcatcatc
     7321 catagataaa ttaattttat gtcattatat acacatgata gatagaaaag taaggaaatc
     7381 ttaaagactt tgtattgatt taacttcatt aaccaacaat gtcaaaagaa aaaattgctt
     7441 tagtaacagg atgctcaaca gggataggat atataacatc tttgacactt gcaagaaacg
     7501 gattttatac ttatgcaact atgcgcaatc ttgacaaatc agcaaatatc aaagaaatat
     7561 cctctaagga atcattgccg atagaggtct tacagcttga tgtagctaat gatgaatcaa
     7621 caaaaaatgc tatggaagta ttaaaagctg aaaaaaatag aatagatgta cttgtaaata
     7681 atgcaggcta tggattaata ggctcaattg aagaaatttc aattaaagag ttgaaagcac
     7741 agtttgaaac taatttgttt ggaatggtta gaatgatcca atctgcatta ccgttgatga
     7801 gaaatcaaaa agaaagcggc aggataatta atttaagttc tattggcggt attttgggat
     7861 atccattaag tgctgcgtac agtagtacca aatttgcagt agaagggtta attgaatcca
     7921 tgagatatga agtagaacca tttggaataa agactatact tatagaacct gcttttgtaa
     7981 tagatacaaa ttttcataac aacgtaaagg tccctgaaaa aactacctca ggttcctatt
     8041 catcaccata caaagaattt actcaaaagc tttttgaaaa ctactggaat gttcaaaatg
     8101 aataccaaac taaagcagag gacgttgcaa aaataatact ggaggcagcg atatctgaca
     8161 atcctaaaca aagatatcag gtagggaaat atagtgaaat gatggttaaa acaaaatata
     8221 catattcaga ttcagaatgt aaaaatataa tgcaaaaaca attcttcagt cagtaatcaa
     8281 tctttctatc tatatagttg ctgattcttt catctattca attactcaaa atattgaaat
     8341 ataactgatc ggtttacgat ttaagaatta caaatgaagg atagaactga aaattttgat
     8401 gattactatc c
//
LOCUS       DATIAS010000037         2758 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_689542, whole genome shotgun sequence.
ACCESSION   DATIAS010000037 DATIAS010000000
VERSION     DATIAS010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689542"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1417
                     /locus_tag="VLA74_00735"
     CDS             <1..1417
                     /locus_tag="VLA74_00735"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSF49259.1"
                     /translation="PSLLNVSTMFVSYPIFLTYTNNTLLDFSHSYTTKDLYEIVRTQQ
                     EEEATSQENFIGTTYAAISISKMGELMKNQISLKNNSSVSILDRDGKLIYSSSEKFYN
                     LLQDGKINETLIQSQYDPPNSILLPKIKDLVLSGKSGNTDLIDKNGNMSTISYTPVRI
                     DDQNVFYVVLSIPHVFAHEVNDLISQQQNFTMGSLILTVSIVIILVVMQGLFNNTLKK
                     VVAKKTADLKSTILLLEKSNEQLKQHDILQKEFINIAAHELRTPTQSLTGYIEMIDTF
                     PENFKKYLEPLKRNAKRLSILIEDILDVTRIEAGTLKLDKSKFDLNEKVNNVINDLTV
                     GIESVKNHKINLIFLQPKEPIMVFADKVRIYQVVNNLLTNAVKFTQEGTVITTIEKEH
                     DKEENKEFAVVRIKDTGHGIHSDILPRLFQKFASKSISGTGLGLYIAKSIVEAHGGKI
                     WGMNNKDGKGAEFGFSLEIKS"
     gene            2010..2237
                     /locus_tag="VLA74_00740"
     CDS             2010..2237
                     /locus_tag="VLA74_00740"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF49260.1"
                     /translation="MSHKYKSKISIIFSILEACIDGKRRSHMISKFALSHSKFKFYSD
                     FLLEKGFLFIDDGGLMKVTKKGKSFLERLMN"
BASE COUNT         1049 a          387 c          441 g          881 t
ORIGIN      
        1 accttcttta ttaaacgtgt ccaccatgtt tgtttcgtat ccaatttttt taacttacac
       61 aaataatact ctattagatt ttagtcatag ttacacaacc aaagatttat atgaaattgt
      121 tagaacccag caagaagaag aagcaacatc tcaagaaaat ttcataggca caacatatgc
      181 agcaataagt atatctaaaa tgggcgaact aatgaaaaat caaatttcac taaaaaataa
      241 ttcctcggta tctattcttg acagggatgg taaactaatt tattcttcca gcgaaaaatt
      301 ttacaacctt ttacaggatg gcaaaataaa cgagacactt atccaaagtc aatatgatcc
      361 tcccaactca atacttttac ctaaaataaa ggacttggtc ctgtctggaa aatctggtaa
      421 tacagattta atcgataaaa atggaaatat gtcgacaata tcatacactc ccgtgcgtat
      481 tgatgatcaa aatgtatttt acgttgtact ttctataccc catgtttttg ctcatgaagt
      541 taatgatctt atttcacagc aacaaaactt taccatggga tcgctaattt taactgtaag
      601 tatagtaatt attctcgttg ttatgcaagg attattcaat aataccttga aaaaagtagt
      661 agcaaaaaaa acggctgacc taaaaagtac aatcctatta ttagaaaaaa gtaatgagca
      721 attaaaacaa catgacatac tgcaaaaaga attcattaac atagcagccc atgaattaag
      781 aacacctact caatcgttaa ccggatatat cgaaatgata gacacttttc ctgaaaattt
      841 taaaaaatat cttgaaccac tgaaaagaaa tgcaaagaga ttgtctatac tcattgaaga
      901 tatattagat gttacaagaa ttgaagctgg aactttaaaa cttgataaat ctaaatttga
      961 tttgaatgaa aaagtaaata acgtaataaa tgatttaaca gtaggtatag aatcagtaaa
     1021 aaatcataaa ataaatctta tttttctgca gccgaaagaa cctatcatgg tatttgctga
     1081 caaggtaagg atctatcaag tggtcaataa tttattaaca aatgcagtaa agtttacgca
     1141 agaaggaact gttataacaa caatagaaaa agaacatgac aaagaagaaa ataaagaatt
     1201 tgctgttgta aggataaagg atacaggtca tggaatacat tccgacattc tacctaggct
     1261 ctttcagaaa tttgcttcca aatcaatttc tgggactgga cttggcttat atattgcaaa
     1321 aagtattgtt gaagctcatg gtggaaaaat atggggtatg aataacaaag atggaaaagg
     1381 agcagaattt ggattttctt tggaaataaa atcataaaag aaagttgagg attcataata
     1441 tcgatcatca aatagtatga tcttagtcgg tgcttgatga ttggtaatat aatatagtct
     1501 tcattattta ataagattat atttgtttag tgccaggtaa tctccctggg cgaggcctat
     1561 gaatttcttc aatggtcctt gtgcgcaatg ttaacaggac gtcattcttt attaggctgt
     1621 ccacacgagc gaggagcgtt ttagctcatg tggacagaaa aagatcgacc gcttgtggtc
     1681 aatattaaat agacgatatt gtttattagc attataatta caaaataata gggtaaaaga
     1741 atcagtgtaa tgattacggg atggcaacca ttatttacag atttcataaa taagatcctt
     1801 gtcctttaaa acaaaaaaaa ttggatcttg atattagaaa ttacttgttg gaacgtatta
     1861 gctcaaatgt cttaatgtaa tcctttgaca aaatacttga aaaatatcat ctattgtatt
     1921 tatctggaga tttatcaaaa gatgtctatc atctaccatc ctgacattgg tattacaaca
     1981 attataaaag tttatgtaca tatattactg tgagtcataa atataaaagc aaaatcagta
     2041 ttattttttc aattcttgag gcttgtatcg atggaaaaag aagatctcac atgataagta
     2101 aatttgcttt atctcattca aaatttaaat tttattctga ttttctacta gagaaaggat
     2161 ttttatttat tgacgatgga ggattgatga aagttacaaa aaagggaaag tcttttttgg
     2221 aaaggttgat gaattaaacg tgaatgagta aaaaagcttc agacagcttt tgaccagatc
     2281 gaaattataa agaaattatc tcaaattcct taagattttt tatttcgttt tttatgctat
     2341 acggcatatc ttaaaaagaa tagaatttct ctgtccatgg ttaattgctt ctaattttta
     2401 cgttaattgt actaaataat tcgtacatgg gagagttgat tatatttgct agaatgtgta
     2461 tgtggtacat gaatgatttt tggtaacatt ttaaaagtta aaaacttaaa ttgtaaatca
     2521 tgaacatcgc ctacactaag aaaaattttt tgacctagat gccttgtgtt ttcaaaaaaa
     2581 tttcattgag ttacatgagg aaggcgcata tcatcgacga aaattatgtt caaagataac
     2641 agaaaataaa tgaattgtta catcaacatg ggataacata tctatactga tacagagtaa
     2701 ttagaaaaag gagaaaaaaa tctagataca acaactctat ctactatcaa gaaatata
//
LOCUS       DATIAS010000038         3708 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1506958, whole genome shotgun sequence.
ACCESSION   DATIAS010000038 DATIAS010000000
VERSION     DATIAS010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3708
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1506958"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            534..1184
                     /locus_tag="VLA74_00745"
     CDS             534..1184
                     /locus_tag="VLA74_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HSF49261.1"
                     /translation="MDDVTFSIPIVLQILDLFGIMAFAVTGALKAIEYKMDIVGVIML
                     ASSTGLAGGLIRDVILNRIPPKVLVDPFYLLVAVSTGLIVFFLYRFFKENFNLFLKFD
                     AIGLGVFSIIGASVAYEITGLNFIAMAFAGIFTAIGGGIFRDIIVKEIPLVFLKELYA
                     SASFLGITIFYIMLFFEINYYFSMMICMVIITVFRLLSMKFNWNLPRLHTDEKNVD"
     gene            complement(1345..1818)
                     /locus_tag="VLA74_00750"
     CDS             complement(1345..1818)
                     /locus_tag="VLA74_00750"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSF49262.1"
                     /translation="MITLYGREIFWPIVLIMLFIFGGKIGKKTAVIAAISMILLMPLV
                     SVIKDVIDRPRPNVSGVETFPVSADTFSFPSGHATIVSAGLATVSIMFRGNMKRTVLF
                     VGLTFEATLVCFSRIYVGVHYPLDVVGGILLGTGSSFLLVGLTQSFLFKTKFVEN"
     gene            complement(2131..>3708)
                     /locus_tag="VLA74_00755"
     CDS             complement(2131..>3708)
                     /locus_tag="VLA74_00755"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSF49263.1"
                     /translation="FIIFFSSLIIFLVYFSFIFAQTDKELTGSNGKSMLIVGSYPVGI
                     DINPLTGMIYVANQFSNTISVIDSKTDNIESTILVDNFPYDLDTNPFNNRVYVTNRGS
                     GTVSVIDGSTNQKLSDVQVGSSPVGISVNPSKNLIYVTNLDSKSLSIIDGINNDVIKT
                     IKLNHIPYGITVNPITNKIYISNIDNSTVSVIDGKTNQVLDNITVGIVPTGLYIDLKT
                     NILYAANYVSNTMSIIDVQTNKLKSTVKVGNSPVDIAADSITNKIYVSNLGDNTVSVI
                     NATTSKKIKDISMGTKIAENYESNDPSLNLPIEVAFPLVASRLAVNPDTNLIYVSNTA
                     FNGISVIDSKLDQIVVRLSVSVNPENSGTVECNNYKFPSIHSILYPHNTEITCVAHAS
                     REKSFDFWSDFVSTNKNPLKINVTENSQLTANFKDSISTETYIGMVAGIIGSTSIFAG
                     FYHRRRERRNLNRVMNRIDFTYDALKQDRVEGVKQLEEIREEINHLFKQGKITDSHYN
                     ILEKKIAELVNKLLRDG"
BASE COUNT         1237 a          555 c          569 g         1347 t
ORIGIN      
        1 attagtgtct attttatatg aatttaggtt ctattcctta ttgttactgt ggcgtaagag
       61 taagagtatt gagtttttat ctatctataa taatataatt attaaatatt aaaaaataga
      121 ttaattaatt tattactcta gcgatatttc atttatttta ttttttggcc atagttactt
      181 cggtaatcca ctcacatttc aaattgaatt tggaatgatg tttttctact gcttccttgt
      241 tgggtgcctc ctgcagacag tagcatagat ccgcatcttt attaaagaga atgttaatgg
      301 gggtaacatc aaactcatcc ttggaaccta ttaattcttc tacattttaa tttctagaga
      361 aggcatagtg tgtacgtcta aaaatattgg cataactata atttgagaat gtatttatta
      421 atttattggt agttatagta aatagtgtgt aattgcatat tcatctatta ctctagcgat
      481 atacatgttt ttgaagaata tttaatatgc ttaatgcttt ttaaatatcc taattggatg
      541 atgttacatt ttctattcca atagtacttc aaattcttga tctgtttggt atcatggctt
      601 ttgcagtaac aggagctttg aaagcaattg aatacaaaat ggatattgtt ggggtaataa
      661 tgttagcaag cagtacagga ttagctgggg ggttaattag agacgtaatt ttaaacagga
      721 ttcccccaaa ggtcttggta gatccatttt atttgctagt cgccgtctca acaggtttga
      781 tcgtattttt tttgtatcgt ttttttaagg aaaattttaa tttattcttg aaatttgatg
      841 ctatcggttt aggtgtattc agtataatag gcgccagtgt tgcctacgaa ataactggtt
      901 tgaatttcat tgctatggca tttgctggaa tctttaccgc cattggagga ggaattttta
      961 gagatataat tgtcaaggaa attccactgg ttttcttaaa agaattatat gcatctgcaa
     1021 gttttttggg tattaccatc ttttatatta tgttattttt cgaaataaat tattattttt
     1081 ctatgatgat ttgtatggtt attattacag tatttagatt actttccatg aaattcaatt
     1141 ggaatctacc tagattgcat actgatgaaa aaaatgtgga ttaatgttaa cgttaaatct
     1201 agtactatat actactacaa aacctacaca tactttagtt tatttgatta aagaaagaaa
     1261 aagcgcaaat gatagcaaaa ataaaccatt ttaatagcaa acagaaaata caggtgacat
     1321 caatttttct acatggatat gttcctagtt ttctacaaat ttagttttaa atagaaatga
     1381 ttgcgttaac ccaactaata gaaacgagga tccagttccg agcaatattc ctcccaccac
     1441 atctaatgga taatgaacac caacatagat tcttgaaaaa caaaccaatg tagcttcaaa
     1501 agtaagtccc acaaagagaa cagttctttt catatttcca cgaaacatga tagacacagt
     1561 agctaatcca gctgaaacaa ttgttgcatg tccggatgga aaagagaatg tatctgctga
     1621 aaccgggaaa gtctcgactc ccgatacatt cggtctcggt ctgtctatta catctttaat
     1681 tacagatacc aaaggcatca gcaatatcat ggatattgca gcaattactg cggtcttttt
     1741 tcctatttta ccaccaaaaa taaataacat aattagtaca attggccaaa aaatttctct
     1801 cccgtataat gtaatcatga gcataatgtt atctacaaaa gagggtaaga aaagcgagag
     1861 ttgttttaac tgcagaaaat aaaaattatc agtttttaat aaacctgtaa aaattgtata
     1921 tgtttcatta tatataataa tagaaagaaa aacgaaagag agcaagcata caaacgaagc
     1981 taaaaatatt ttatccacaa tcaattatta caatattaac aactagagat acatcatatt
     2041 aattttttac tttaatgatg gatccataag cccaaggtag aataaagaag ccgtccgtta
     2101 tagttgaatt atagaaatat ccttttaaca tcaaccgtct cgaagtaatt tgtttacaag
     2161 ctcagcgatc tttttttcta aaatgttata atgagaatca gttattttac cttgtttaaa
     2221 taaatgattt atttcttctc tgatctcttc taattgtttg actccttcaa ctctatcttg
     2281 tttcaatgca tcgtaggtaa aatctattct attcataact ctgtttagat ttcttctttc
     2341 ccttcttcta tgataaaatc cagcaaaaat agaggtcgaa cctattattc ctgccaccat
     2401 tcctatatat gtctctgttg atatggaatc tttgaaatta gcggtcaact gactattttc
     2461 tgtgacgtta attttaagtg gatttttgtt agttgatacg aaatcagacc aaaagtcaaa
     2521 ggacttttct ctagatgcat gagctacaca tgttatctca gtattatgtg gatataaaat
     2581 agaatgaatt gatggaaatt tgtaattatt acattcaact gttcctgaat tttctgggtt
     2641 aacacttaca gacaaacgta ctacaatttg atctaacttg ctatcgatta ctgaaattcc
     2701 attgaaagct gtgttcgata catatatcaa atttgtatct ggatttacag ctaatctact
     2761 agctactaat ggaaatgcga cctcaatagg caaattaagc gagggatcgt tactttcata
     2821 attttctgct attttagtcc ccatagagat atcttttatt ttcttactgg tcgttgcatt
     2881 aattacagaa acagtattgt ctccaagatt ggaaacatat attttgtttg ttatagaatc
     2941 tgctgcaata tctactggag agttaccaac tttgactgta gattttaatt tatttgtttg
     3001 aacatcgatt attgacattg tatttgaaac ataatttgcg gcatacaata tgtttgtttt
     3061 taaatctata tacaaaccgg taggtacaat tccaactgtg atattatcta aaacttgatt
     3121 tgtttttccg tctattacag atacagtaga attatcaata ttagaaatat atattttgtt
     3181 tgttatagga tttactgtta taccataagg aatatgattc aactttattg tttttattac
     3241 atcgttattt atcccatcta taatagacag cgatttagaa tcgaggtttg tcacataaat
     3301 taggtttttg gatggattta cagatattcc tactggagat gatccaactt gaacatcgga
     3361 aagcttttga tttgtagaac catctattac agatactgta cctgatcctc gattggtcac
     3421 atatactcta ttattaaaag gattggtatc aagatcatat ggaaaattat ctaccagaat
     3481 cgtgctttca atattatctg ttttactatc tattactgaa atagtattag aaaattgatt
     3541 ggcaacataa atcatacctg ttaatggatt tatatcaata cctacaggat agctaccaac
     3601 tattaacata gattttccat tactacctgt caattcttta tctgtctgtg caaaaataaa
     3661 agagaaataa acaagaaaaa taataagaga cgaaaagaaa atgataaa
//
LOCUS       DATIAS010000039         2881 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1780115, whole genome shotgun sequence.
ACCESSION   DATIAS010000039 DATIAS010000000
VERSION     DATIAS010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780115"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            531..2315
                     /locus_tag="VLA74_00760"
     CDS             531..2315
                     /locus_tag="VLA74_00760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49264.1"
                     /translation="MSYKIIDSLHQEIGKTIASERFLNTMDGFWFALKPNVIINSFDF
                     VTVDTLFNSKSIGIIQELQAVTAAEHDYYNYYLSDSHTISSTKEQLKQKGKEKEDEED
                     EEEKSEQLSKRQLNSLILVKVAIMANTGVKAEGYEESKSVNFPVEVGKTVRFANEEEI
                     IFALGIPQMENPIPAGIIETTNGLEVPITLDVSYLAGADTAHVNASGISGNRKSSYIL
                     FLLQSSYQTLKKMNQNVALIIFNTKEQDLLYIDQKEKYTKKRTERLFDVLDLDIEPFE
                     NVTYFLPRGKDGKPNSIHVPKNYRTYSYELKDVYDRLELLFSEPYDLHHDFLSIMNYI
                     YESWPLKSNIGNKDISTWTDLSEFKEYPETIVSNKSSLLYFLGRLQRFRKSPMFIDKK
                     KTSTYLSNEIKKIKAGEVFVIDVATISSFEEQAFVVGDVMKSIDEMYSSRYSNLDDDN
                     TSNNTNIDSNKNNNVQNDQKKLHYILVFVDEINRFIPKSQNGKMNSVSEQIMRTVSAG
                     RTRGTILFSAQQFKSATDYRLQENTDLHITAKLGLSELSTEPYSMLDESTKKNIVRLN
                     KGELVMVHPAFRHPIKIGFPKATFKEPY"
     gene            complement(2606..>2881)
                     /locus_tag="VLA74_00765"
     CDS             complement(2606..>2881)
                     /locus_tag="VLA74_00765"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HSF49265.1"
                     /translation="KKADIGYWIGKQYQGKGIATECVKLVVNYAFDELKLEEILAYVF
                     PDNNSSIRVLEKNGFEKTKEVNEYHPISKRYKDSLVYIIKNKMSISS"
BASE COUNT         1106 a          400 c          448 g          927 t
ORIGIN      
        1 ttggttaatc aaatgcataa aaagattgat gaacaaaatg agttaattaa gattttacaa
       61 aaaatatcat catcatcatc atgccataaa gaccagcatg taggtaatga agattcctag
      121 taagattatc aagtatgtac atattggtaa agacacttta tctttctatg gctatcttta
      181 tccttagtaa aaagatattt atataataag caaacattta gttacataaa aagattaatt
      241 taaggcaaaa tatttctaca atataagact cttatttttg catcgctata ggtatttttc
      301 cttctgttta aatatctaac aaatccgtat accttgcatt tgataatgta gaattatcca
      361 taaaatggaa tatgagatag agaagtacat atacgagtag caacaaacac ccataagaag
      421 atgcaatagc ggggtcggga aaattttgaa ggccaatact atatgaactc tatagtttaa
      481 agtatctata ttatcaaaga gacttatctt ttatagcata ttgataatta atgtcatata
      541 agataataga ctctttacat caggaaattg gaaaaactat tgcttctgaa agatttctca
      601 atacaatgga tggtttttgg tttgctctaa aacctaatgt aatcataaac tcttttgact
      661 ttgttacagt agatactttg tttaatagta agtcaattgg aattatacaa gaattacaag
      721 cagttactgc tgctgagcac gattattata attattattt gtctgatagt catacaatat
      781 caagcacaaa agaacaattg aagcaaaaag gaaaagaaaa agaagatgaa gaagatgaag
      841 aagaaaaaag tgaacaacta tctaagaggc aattaaacag tctcatattg gtaaaagtgg
      901 caataatggc aaatacagga gtgaaagcag aaggatatga agagagtaaa tctgtaaatt
      961 ttcctgtaga agtaggtaaa acggttagat ttgctaatga agaagagatt atatttgctt
     1021 taggaatacc tcagatggaa aatcccatac cagctggtat catagaaaca acaaatggtc
     1081 ttgaagttcc tattacattg gatgtatctt atttggctgg tgcagatacc gcacatgtta
     1141 atgcatcagg aatatcagga aacagaaaaa gctcttatat tttatttttg ttacaatcat
     1201 catatcagac acttaaaaaa atgaatcaaa atgttgcatt aataatattt aacacaaaag
     1261 aacaagattt gctatatata gaccaaaaag aaaaatatac caaaaaaaga actgaaagat
     1321 tatttgacgt attagattta gatatagagc catttgaaaa tgtaacttat tttcttccaa
     1381 gaggaaaaga cggtaaacct aattctattc atgtaccaaa gaattacaga acatattctt
     1441 atgagctaaa agatgtttat gatagactgg aactgctatt ttccgaacct tatgatttac
     1501 atcatgattt cttatcaata atgaattaca tttatgaatc gtggcctcta aaaagtaata
     1561 ttggaaataa ggatataagt acatggactg acctttctga atttaaagaa tatcctgaaa
     1621 caatagtatc aaacaaatct tctcttttat actttttagg ccgattacaa agatttagaa
     1681 aatcgcctat gtttattgat aaaaagaaaa ccagtaccta tcttagtaat gaaattaaaa
     1741 aaattaaagc aggtgaagtc tttgtaatag atgtagcaac aatatcttct tttgaagagc
     1801 aagcatttgt tgttggggat gtaatgaaaa gtattgatga aatgtattct tcaagatact
     1861 ctaacctgga cgatgataac acaagcaata atacaaatat agatagcaat aagaataata
     1921 atgttcaaaa tgaccaaaaa aagttacatt atattttagt ttttgttgat gaaattaata
     1981 gatttatacc taaatcccaa aatggaaaaa tgaattcggt ttcagaacaa ataatgagaa
     2041 cagtatctgc agggagaaca agaggaacta ttttgttttc cgcacagcaa ttcaaaagtg
     2101 caacagatta tagattacaa gaaaatactg atttacatat tacagcaaag ctaggattat
     2161 cagaattatc tacagagcct tattccatgc ttgatgaaag tacaaaaaag aatatagtta
     2221 ggctaaacaa gggagaattg gttatggttc accctgcatt cagacaccca ataaagattg
     2281 gatttcctaa ggctacgttt aaagaaccat actaattcaa caaagataag agggctgact
     2341 gcctgtaaaa cagaacagtt tggatgtttc ttctgaatct gtcgaattct attaactaaa
     2401 aaaaataaaa gtcccaaaag ggatttctcg tatagttagc actaagacaa ctgcttaacg
     2461 tggtggtttc attagtggaa gtttacgatg ggtataatcc tatcaatatt attttctaat
     2521 aagtttctga taataaaatc taaatataag atgttagtat ctctacagca gactcttatt
     2581 tttgcaccgc tatcggtgtt actcattatg aacttatgct catcttgttt tttattatat
     2641 aaaccaaaga atctttatat ctttttgaga taggatgata ttcgtttact tcttttgtct
     2701 tttcaaatcc atttttttcc aaaactctga tagatgaatt gttatcggga aaaacataag
     2761 ctaaaatttc ttctaatttt aattcatcaa atgcataatt aacaactagt ttaacacatt
     2821 ctgttgctat acctttacct tgatattgtt taccaatcca atatcctatg tctgcttttt
     2881 t
//
LOCUS       DATIAS010000040         2913 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1371811, whole genome shotgun sequence.
ACCESSION   DATIAS010000040 DATIAS010000000
VERSION     DATIAS010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1371811"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..485)
                     /locus_tag="VLA74_00770"
     CDS             complement(150..485)
                     /locus_tag="VLA74_00770"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49266.1"
                     /translation="MSHPSKNPDMKWIIAMTHRQQYSSLCGNHDSRDPIKKLRDTHQT
                     RFEKYGVDFLFSGHAHNYQRTYPLSYNEINSSQPIINDNGKTDYTSPKGLFQIVVGTG
                     GIDFDRFTN"
     gene            complement(601..783)
                     /locus_tag="VLA74_00775"
     CDS             complement(601..783)
                     /locus_tag="VLA74_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49267.1"
                     /translation="MIVFSLWDTSYGTDMDCWLDIVKPISDKINSVVGKDDYMLPTHF
                     QQYMENFGLSNEILFI"
     gene            complement(1474..1686)
                     /locus_tag="VLA74_00780"
     CDS             complement(1474..1686)
                     /locus_tag="VLA74_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49268.1"
                     /translation="MHNQNVVVAIPHDAANNITQHFVPNPVNINDGNTIEWINEDTII
                     HIVNGVKDMAIDDIKSKHTADLGLKT"
     gene            complement(1854..2429)
                     /locus_tag="VLA74_00785"
     CDS             complement(1854..2429)
                     /locus_tag="VLA74_00785"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HSF49269.1"
                     /translation="MIRESDSKTHGWMRFAQIGLGAIAIIISLIVITYPGLTTISLVY
                     FLSILFFIVGIEKIITGIIFKSKSRLASIGLGVLVLILSGLALAFPVSATYILVLFIA
                     LALMFDGFARIAHGVGERSESKFNRYFSISVGIISIAISTYIMASPLFGFAFVGFLIG
                     ISIFITGIQILVAGLRGRKLSLKATRMDVGK"
     gene            complement(2658..>2913)
                     /locus_tag="VLA74_00790"
     CDS             complement(2658..>2913)
                     /locus_tag="VLA74_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49270.1"
                     /translation="FHAKNLVEEKVGNQTSSPLEEMMTDEQIQAKITDFKAKHPKFAA
                     VVEDISNLDLKETAKGYFAAEALQKLLKHHAKNLVEEKVM"
BASE COUNT         1004 a          446 c          406 g         1057 t
ORIGIN      
        1 tagtattttt gtgatttaat tattttgaat tcatctaata cttagccgtc attggaatag
       61 tatttaccta ttaacgtatt tccgttatca ggtacatcga catttaaaaa tctatagatc
      121 gaatcttgct ggtatacaac ataaggttct tagttggtaa aacgatcaaa atcaattcca
      181 ccagttccta caactatctg aaacaatcct ttaggggatg tgtagtcagt tttcccatta
      241 tcgttgataa ttggttgtga tgaatttatt tcattataag ataaaggata tgttctttga
      301 taattatggg catgaccgct aaataaaaaa tcaactccat atttttcaaa tcgagtttga
      361 tgggtatctc tcaatttttt tatcggatca cgagagtcat gattgccaca taatgaagaa
      421 tattgctgtc tatgagtcat agcaataatc catttcatat ccggattttt tgatggatgg
      481 gacaaatctt tgtcaacata ttcatattgt tttgtttcct agacatctga gaaaccatga
      541 ccatcaccag cactatatgt aaattcagaa tacttgatta gaaaacggat atttttgtaa
      601 tcaaatgaat aatatttcat ttgataatcc aaagttttcc atatattgtt gaaaatgtgt
      661 tggcaacata taatcatctt taccaactac ggagttgatt ttatctgata taggtttcac
      721 tatatctagc caacaatcca tatcagtacc ataggatgta tcccaaagac tgaagactat
      781 cactggattg cgatcttgaa tggaatctac tgttttcttt gtatcttctg tccatcccca
      841 gtcttcaact attgtaatat tgaaattaga cgaatttttt tattttcaaa ctgttcattt
      901 ttttccttat aagacataac ctgactttta gaatctggac tttgagttat cactttttat
      961 gctttgaaga gcttttaacg ctgaagttat tacgatcata atatccttct gatgggaatt
     1021 caaaaaaatc atcatctttg gaaaatgaag ttttaatgaa atatgagtat aaagtaataa
     1081 cgacaagcat taggaaatga ttaatatttt attatattta ttaaacatat taagataaaa
     1141 ttttaatggc aaacatatct gaaataaata agttttaatg tgacccagta caaatgcaga
     1201 ggtaaaaatt gagaatctcg aataaataat atttttttta attttataca atttattgtc
     1261 tattattatc ttcttataaa cagtaagtca tttgttattt gaataaggac aaatgtgtat
     1321 ttttaattag aaatgagttt ttcttggaat ttttcgacat atattgtcga tataagataa
     1381 agatgggata atacaaatat agttgtaaat cccttcttga tcgaatgtat aataaaatgt
     1441 gtatgttgga tatagaatgt ttgaatcaaa taattaagtc tttaatccta ggtctgccgt
     1501 atgtttagat ttgatgtcat caatagccat atcctttaca ccattgacaa tatgaataat
     1561 agtatcttca tttatccact ctattgtgtt accatcatta atattgactg gatttggtac
     1621 aaaatgctga gtaatattgt tagccgcgtc atgggggata gccacaacaa cgttctgatt
     1681 gtgcatatga actagataat gtactcgacg aaagtaataa taataataaa aaataaataa
     1741 tgtaatattc cattttcaac tttcaacaag cccttttcaa caagtaggta taatcgcaga
     1801 cttattttcc atactataga tgggatttaa aaatttaaaa tagtaactcg attttatttt
     1861 ccaacatcca ttcttgtagc ttttaacgat agttttcttc ctctcaggcc tgccaccaaa
     1921 atttgaattc cagttataaa aattgatatt cctattaaaa agcctacaaa tgcaaaacca
     1981 aatagtggtg acgccattat atatgtggat attgcaatag atattattcc tacacttata
     2041 ctaaagtacc tattgaattt gctctctgat ctttcaccaa ctccatgagc tatacgagca
     2101 aaaccatcaa acatcaaagc caaagcaata aacagtacaa gtatataggt agcactaact
     2161 ggaaatgcta atgccaaacc agataatatt aaaacaagaa ctcccaaacc tatacttgca
     2221 agacgtgact tactcttaaa gataatccct gttataattt tctcaattcc tacaatgaag
     2281 aacagaatgg aaagaaaata tactaaagat atagtagtaa gtccaggata tgttataaca
     2341 attaaggata taattatagc aatagctcct aaaccaattt gggcaaatcg catccatccg
     2401 tgagtttttg aatcagattc tcttatcatt aataaaataa atgcgatagt tatctgtata
     2461 tatttgttac tattgtttca gtaacactac gtgttttaat aacaatactt ctttaaaata
     2521 taaatacatt tttattttaa caaaaaacat gtttttaatt tacaaaatct cttattgtcc
     2581 aataatatga tacttcaaaa caaaataaaa agaaaatata aaaattttag atatttttat
     2641 atccgaaatt tagttactta cattactttt tcttcaacta gatttttagc gtggtgcttt
     2701 aacaattttt gtagagcttc agcagcaaaa taacctttgg cagtttcttt caagtctaga
     2761 ttagatatat cttcaaccac tgcagcaaat tttggatgtt ttgccttgaa gtctgtaatt
     2821 tttgcttgaa tctgttcgtc tgtcatcatt tcttctaatg gtgaactagt ttgattgcct
     2881 actttttctt caactagatt tttagcgtgg aat
//
LOCUS       DATIAS010000041         4048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_963373, whole genome shotgun sequence.
ACCESSION   DATIAS010000041 DATIAS010000000
VERSION     DATIAS010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_963373"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VLA74_00795"
     CDS             <1..252
                     /locus_tag="VLA74_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49271.1"
                     /translation="DEGCGKDEGGGKDEGGGKDEGGGKDEGGGKDKINDGKNDDEDIS
                     LDELFGSDEDEDKDAEDKDAEDKKNDVPFKLPFIAVPFP"
     gene            345..462
                     /locus_tag="VLA74_00800"
     tRNA            join(345..370,387..400,418..462)
                     /locus_tag="VLA74_00800"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:397..399,aa:Leu,seq:taa)
     gene            complement(486..1115)
                     /gene="pdxT"
                     /locus_tag="VLA74_00805"
     CDS             complement(486..1115)
                     /gene="pdxT"
                     /locus_tag="VLA74_00805"
                     /EC_number="3.5.1.2"
                     /EC_number="4.3.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HSF49272.1"
                     /translation="MSEINIGVLGFQGDIEENIISTKEALKNMNLNGIVRSIRHSESI
                     ENLDGLILPGGESTVIGNLVCLYNGQMFQTIKKRVSEGLPVMGTCAGLIMLSKRAYDK
                     VVGETRQQLLEVLNVVVERNAFGRQHNSFEMNLEIPILGKTPFKGIFIRAPIITDIED
                     NVNIISSFDDKIVAVNQDNILATSFHPELSSDSRMHELFVKKVLGFKKT"
     gene            complement(1112..2083)
                     /gene="pdxS"
                     /locus_tag="VLA74_00810"
     CDS             complement(1112..2083)
                     /gene="pdxS"
                     /locus_tag="VLA74_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HSF49273.1"
                     /translation="MTISLVATELEPKGLKFKNLKNGQLLQGTTLVKRGFAHMQKHGV
                     IMDVTTVEQAHIAEDAGAVAVMVLDKLPYDVRKVGGVARTASVKIIEEIMDEITIPIM
                     AKCRIGHISEAKMLEAVGVDMIDESEVLTPADEENHIWKWDFTTPFVNGAKNLAEALR
                     RIEEGSSMIRTKGEPGTGNIAEAVRHIKNVNNDIRKINSIYQRNDHLELISFARELKV
                     SYMLVKETARLSRLPVVNFAAGGIATPADAALVMNYGCDGVFVGSGIFKAEDPDQRAR
                     AIVLATTYYDDPKVVMEAQKMVDERKSLLGLDTKNLELRMQERGPSI"
     gene            complement(2369..3082)
                     /locus_tag="VLA74_00815"
     CDS             complement(2369..3082)
                     /locus_tag="VLA74_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49274.1"
                     /translation="MKWFIILFVITLSFLIVFKFLYFEKSFPFFNLSSPLGNNNNTSF
                     YVNGSLFSLIILGDQNPIEHDDSISNLLPFKTKGKNTDVVDLVTSSLMDILINQESKF
                     SLDELLPDSEIADNKNYNNMGKLLILNGSWILDVKNGEIISFTAKISKISKDGISPHT
                     YEILNFIDETDTPIRLSETENNIIKGKAQIITPNDIINVDLYLILQKNTISIILQPKI
                     IDDDYLGQPIYGLTDYIRT"
     gene            complement(3146..3517)
                     /locus_tag="VLA74_00820"
     CDS             complement(3146..3517)
                     /locus_tag="VLA74_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49275.1"
                     /translation="MPSRNLEFDIIYGKIFSLVNELKNDGIDVKIKMEKESGFLGIYT
                     SNFNMLGNAKNGLKDILELSYTTAEHHPYWNMLYNASEIINTILCSWDIDFSDDQIKE
                     MVWRNNEIRYNLTKLESDSNK"
     gene            complement(3697..>4048)
                     /locus_tag="VLA74_00825"
     CDS             complement(3697..>4048)
                     /locus_tag="VLA74_00825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methane monooxygenase/ammonia monooxygenase
                     subunit B"
                     /protein_id="HSF49276.1"
                     /translation="VNRPLRAWISLFSESTNAGNRWEFTSRDPPGNVFEIQPQATVPY
                     TVTAKALEPGVYHVHTQLNVASVGPGLGPGQTVQVSGEAILKPVPWQNVWYQVILIGA
                     GLGVTFATRPWQVI"
BASE COUNT         1308 a          704 c          618 g         1418 t
ORIGIN      
        1 gatgaaggct gtggcaagga tgaaggcggt ggcaaggatg aaggcggtgg caaggatgaa
       61 ggcggtggca aggatgaagg cggtggcaag gataaaataa atgatggaaa gaatgacgac
      121 gaagatattt cgctagatga attatttgga agtgatgaag atgaagataa agatgctgaa
      181 gataaagatg ctgaagataa aaaaaatgat gttcctttta aactaccatt tattgcagta
      241 ccatttccat aaaattcaaa tagaattata ttataaagtc tgtaattaga tttttaatta
      301 ttactgtaag gtttaatatc aggattagcc gacttgcaat acaggcgggg gttgtagagc
      361 ctggccaaat aaaaaacaat ttggagacgc gggacttaag atctaaaaaa atgtgggatc
      421 ccgtccttta gaggttcgtg ggttcaaatc ccaccccccg catttgcatt ttaaaaaatc
      481 aatttttagg tttttttaaa ccccaaaact ttttttacaa ataattcatg cattctacta
      541 tcagatgata attccggatg aaaagatgtg gcaagaatgt tatcttggtt tactgccact
      601 attttatcat caaatgagga aataatatta acattatctt ctatatcagt aattattgga
      661 gccctgataa agattccttt gaaaggagtc tttcccaaga ttgggatttc aagattcatt
      721 tcgaatgaat tatgttgtct tccaaatgca tttcgttcta caacaacatt caatacttcc
      781 aataactgct gtcttgtttc cccaacaact ttatcgtatg cccttttgga taacatgatc
      841 aaacctgcac atgtacccat aactggtagt ccttctgaaa ctcgtttttt tattgtttga
      901 aacatttgac cattataaag acaaactaaa tttcctataa cagtactttc tcccccaggc
      961 aatatcaagc catccaaatt ttcaatcgat tctgaatgac ggattgaccg tactattcca
     1021 tttaaattca tattctttaa tgcctccttt gtcgaaataa tgttttcctc tatgtcacct
     1081 tgaaagccga gtacacctat gtttatttca ctcaaattga tgggcctctt tcttgcatac
     1141 gtaattcaag gttttttgta tccaaaccta aaagagattt tctttcatca accatttttt
     1201 gagcttccat aacgactttt ggatcgtcgt aataggttgt agctagaacg attgctctag
     1261 ctcgctggtc tgggtcttct gccttaaaaa tacctgaacc tacaaaaaca ccatcacaac
     1321 cataattcat aactaaagca gcatctgcag gtgtagctat acctccagct gcaaaattta
     1381 caacaggtag cctagaaagt cttgcggttt ctttaactaa catgtatgaa acttttaatt
     1441 ctcgagcaaa actaattaac tcaagatgat cgtttctctg gtatatagaa tttatttttc
     1501 tgatatcgtt atttacattt tttatatgtc taactgcctc ggctatattt cctgttcctg
     1561 gttctccttt tgttctaatc atagaacttc cttcttctat tctacgtaaa gcttctgcaa
     1621 gattctttgc accattaaca aacggagtag taaaatccca tttccagata tgattttcct
     1681 catcagccgg agtaaggacc tcactctcat ctatcatatc tacaccaaca gcttctaaca
     1741 tctttgcctc cgaaatatgt cctattctac atttagccat gattggaatt gtaatttcat
     1801 ccattatctc ttctataatt tttacactag cagttcttgc tactcccccg acctttctga
     1861 catcatatgg taatttatct agaaccataa ccgctacggc tccggcatcc tctgctatat
     1921 gtgcttgttc tactgtagtg acgtccatga ttactccgtg tttttgcata tgggcaaagc
     1981 ctcgttttac tagtgttgtt ccttgaagta actgtccatt ttttaaattc ttgaatttaa
     2041 gacccttggg ctctaattcg gttgccacaa gagatatagt catgctttaa aattattaaa
     2101 aaagcaacta ttataggttt agtttttaaa tatagcatta attcgagtat tatttgatat
     2161 gttttttaga taatattcaa tattataatt ataatattat atacatcatt attaaagcat
     2221 agacaaacgg cagaaattta tttctgatga gagtcacaat cttgctaacg acttttataa
     2281 aatagcaaaa taatataaat agttatgagc aattcaaagt tacgatataa aaatataaaa
     2341 atttacgata tacgataagt aaaaataatt aagttctaat atagtcggtt aatccgtata
     2401 ttggttgccc tagataatca tcatctatta tttttggttg tagaataata ctaattgtat
     2461 ttttttgtaa aatcaaatag agatcaacat tgatgatgtc atttggcgta attatctgtg
     2521 ctttgccttt tatgatatta ttttcagttt ctgacaatcg tattggagta tcagtttcgt
     2581 ctatgaaatt aagaatttcg tatgtatgag gagaaattcc atctttggaa attttagata
     2641 tcttggcagt gaaagagatt atttctccat tttttacatc taagatccaa ctaccattaa
     2701 gaatcaacaa ctttcccata ttattataat ttttattatc cgctatttca gaatctggaa
     2761 gtaattcatc taacgaaaac tttgactcct gatttatgag tatgtccata agactggatg
     2821 taacgagatc aactacatcg gtattttttc cctttgtctt gaaaggtaat aaattggaaa
     2881 tactgtcatc atgttctatt ggattttggt ctcctaatat tatcaatgaa aacagagaac
     2941 catttacata aaaagaggta ttgttattat ttcctaacgg agaagataaa ttgaagaatg
     3001 gaaatgattt ctcaaaatac agaaatttga atactattaa aaatgaaagg gtaataacaa
     3061 ataaaatgat aaaccatttc atcggataat tattttcata tttcttatac tattaagttt
     3121 ataggactac taataaactt ggtcactatt tattactatc agattctaat ttagttagat
     3181 tatatcttat ttcattattt cgccaaacca tctcttttat ttgatcatca ctgaaatcaa
     3241 tatcccatga acataaaatt gtgtttatta tttcggatgc attataaagc atgttccaat
     3301 atggatgatg ctcagctgtt gtataagaga gttctagaat gtcttttaat ccattttttg
     3361 catttcctaa catattgaaa ttggacgtat atattcccaa gaaaccagac tccttctcca
     3421 tctttatttt aacatcaatt ccatcatttt ttaattcgtt aactagagaa aaaatttttc
     3481 cgtaaataat atcaaattct aaatttctag atggcatata aaaaatattt attaacaaaa
     3541 ttgaatgata taattaaaaa taaattgtat cattaaacta atgtaacaag cgtacaataa
     3601 aaatattaat cgttatggtt ggtaattatg accattattc gtgaaataaa atacaaacac
     3661 aataagatat cttaaaaata aaaaaaatag gttgttttaa attacttgcc acggtctagt
     3721 cgcaaaagtt actcctaatc cagcacctat aagtattacc tgataccaaa cgttttgcca
     3781 cggaactggt ttcaatattg cttctccact tacttgcaca gtctgtcccg gacctaaccc
     3841 tggacctact gatgctacgt tcaactgtgt atgtacatga tatacacccg gttccagagc
     3901 ttttgctgtg actgtgtatg gaactgtagc ctgaggttga atctcaaaga catttcctgg
     3961 tggatccctt gatgtgaatt cccatctatt acctgcattt gtggattcac taaagagcga
     4021 tatccatgct ctaagtggtc tattaact
//
LOCUS       DATIAS010000042         5718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_418359, whole genome shotgun sequence.
ACCESSION   DATIAS010000042 DATIAS010000000
VERSION     DATIAS010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5718
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418359"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VLA74_00830"
     CDS             <1..427
                     /locus_tag="VLA74_00830"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF49277.1"
                     /translation="PSLEAGPVLVKIEYKIDKEHQQQQQQNNKNILNDFLIALKDLSK
                     IRKRDGAIQWGVYRDGTNPHIFIENFVVESWAEHLRQHERLTAADIEILDKVRSFHIG
                     DKPPVVTHYVAEPFPTSSKYNIGKGIDKKETEENNTNEK"
     gene            417..647
                     /locus_tag="VLA74_00835"
     CDS             417..647
                     /locus_tag="VLA74_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49278.1"
                     /translation="MKNNNNNDNTNTMTHGINHVTAICSNPQKNIVICRNNDPIVYRT
                     ETENLFRLFQKTNANIMLKCHQSSHNAIKKIY"
     gene            complement(1073..1261)
                     /locus_tag="VLA74_00840"
     CDS             complement(1073..1261)
                     /locus_tag="VLA74_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49279.1"
                     /translation="MHVSCFIGKHKIPDWVEEELKKEKYPSSYVFKCSEDKCDNYIKL
                     IKINNNNEYLKMDVGKEI"
     gene            1627..2379
                     /locus_tag="VLA74_00845"
     CDS             1627..2379
                     /locus_tag="VLA74_00845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49280.1"
                     /translation="MSNSTDIDPSHQPINYKLHYKIILTITYGFVFVESFFVSFKNLI
                     FPLNTFYEHLIDFSIPASLSIYFILLCIITDTFKTIQLYPYGNRSTPRFCMDFLMAPF
                     YYVILFNTDPYGLNYGQIFYYIPFITGLATLSGLFRYILETRKTTVIVKEGIKDRKGN
                     VSIRTKFIRISGEKKELIFTFILFINFFLIGFFHYLYLNYLENDKTQMVADSKTNTKK
                     INANIMTSFVEISSIIIWRCIRNELLREILSY"
     gene            2961..4112
                     /locus_tag="VLA74_00850"
     CDS             2961..4112
                     /locus_tag="VLA74_00850"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49281.1"
                     /translation="MNKKDNKSSFHFSFCFITIFFTILVAIFIVIESPILNTNHIAIA
                     QQQEQQQQQHQRQQQQVNTTESTNQILSPAKQQTSPFIEDIYFDIDNVTFSHHIASVN
                     GIQMHYVVGGKGDPIVLLHGWPQTWYAWRHIMPALAKNYTVIVPDLRGLGDSSKPLTG
                     YDGKTTAEDIYQLVSQLGFKQIFLIGHDIGAQTAYSYAAVHPNNVSKLVIMELTFPGY
                     MPPSLGSTGLWWVSLHQTPDIPEILVQGKEREYLTWFYKELAYNPSAITKVDIDEFVS
                     HYSAPGGMRAGFEYYRAFPQDAKDNIELAATAKLTMPVLVLSGDIYPALGGDIPGSMT
                     LNSIQSLALATNVQGVIVPYSGHWIPEERPDFLLDQLSKFIGNSSNDSK"
     gene            complement(4524..4787)
                     /locus_tag="VLA74_00855"
     CDS             complement(4524..4787)
                     /locus_tag="VLA74_00855"
                     /inference="COORDINATES: protein motif:HMM:NF023174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3303 family protein"
                     /protein_id="HSF49282.1"
                     /translation="MNNAETRKLVLEHGPKIVEEASKQNIKIINQYHSGLEHTFLWVV
                     EANDAHLIQSFFAPNVGKSNALKIVPLITYSDVIEQCKKLAHF"
     gene            complement(5054..5239)
                     /locus_tag="VLA74_00860"
     CDS             complement(5054..5239)
                     /locus_tag="VLA74_00860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49283.1"
                     /translation="MENIENDREIIVLTFWETIEDIEKYYSKGNDILFNLVEKVKPMF
                     VQMPERSEYKIVLLEID"
     gene            5457..>5718
                     /locus_tag="VLA74_00865"
     CDS             5457..>5718
                     /locus_tag="VLA74_00865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49284.1"
                     /translation="MKHQVIIPQFLRNESIRNYIPQTLKIQKRDTITWINTDSESHHL
                     YFIKIDPDPTNIEVLDERLYLKSGELGEVMFNYNYERIDYVCK"
BASE COUNT         2072 a          804 c          770 g         2072 t
ORIGIN      
        1 accaagttta gaagcgggtc cagttctggt aaagattgaa tataaaattg ataaagagca
       61 ccaacaacaa caacaacaga ataacaaaaa tatcctcaat gactttttga tagctctcaa
      121 agatttatct aaaattagaa aacgagatgg agcaattcaa tggggagtat atagagatgg
      181 tacaaatcca catattttta ttgagaactt tgtagtagaa tcttgggctg aacatttacg
      241 acaacatgaa cgtttaacag ctgcagatat agagatccta gataaagttc gtagctttca
      301 cataggagat aaacctccag ttgttactca ttatgttgca gaaccttttc ccacttcatc
      361 aaaatacaat ataggaaaag gcatagataa aaaggaaaca gaggaaaata atacaaatga
      421 aaaataacaa taataatgat aatacaaata ctatgacaca tggaataaat cacgttactg
      481 caatatgtag taatccacaa aaaaatattg ttatctgcag aaataatgat cctatagttt
      541 atagaactga aacagaaaat ctttttcgat tatttcaaaa aactaatgca aacataatgt
      601 taaagtgtca tcaatcaagt cacaatgcaa ttaagaagat atattgattg caagaagatg
      661 gatatcaaat aatttttctg tttatgttta aattagatat gggataaaaa gttaatcaat
      721 ttcaagtaat actattttat aatctgatct ttcttgcatt tgctcaaaca ttggtttgac
      781 tttattacac acaataatta tttaatgaat aacttattaa atataatttt tttgtaaaat
      841 taaaaaattt ttcagaagga ttaaagggca acacatttca tataagaaat tatattttag
      901 ttttttcaag tcatttacta ttatacattt tcgtaatcac taaaacggag atgtgataac
      961 tagtgatttt gacgcaattt tgtagtttca aattaatcga gttaactgta aaagaaatga
     1021 ttgagaaatc tatatattaa aaataaaatg tgtaattaat ttatttactc ttttatattt
     1081 cctttcctac atccattttc aaatattcat tattattatt gattttaatt aattttatat
     1141 aattatcaca tttatcctct gaacatttga aaacatagga agagggatat ttctctttct
     1201 ttaattcttc ttctacccag tcaggtatct tatgtttacc tataaaacaa gaaacatgca
     1261 atttatttct tccttaactt tttcctacgt atacgacaat ttatagtagc ttttacaatt
     1321 ggattggttt gttaatgtaa aaacttggct actataaaag agcgtcatga taatattaaa
     1381 tttaattcga ttttttatta ttattaggat acgtgtagaa acactcatag gaaatttttg
     1441 aatttgtttt actaatgatc ttccaaaatt agcaagacat atgaacataa atataaatat
     1501 tattataaac ttttttatca tcattattct ttatctccat aatatataaa ttctatagat
     1561 agataattgt cctaatgtaa agttgcaaat aatagtataa ataaaagttt gaatttatat
     1621 tttaaattgt ctaatagtac agatatagat ccctctcatc aacccataaa ttataaactt
     1681 cattataaaa taattttaac tattacctat ggatttgtat ttgtagaaag tttttttgtt
     1741 agttttaaga atttaatctt tcctcttaat acattctatg aacatttaat tgatttttct
     1801 atacctgcat ctttatcaat ttatttcata ctactttgta taattacaga tacatttaaa
     1861 acaattcaat tatacccata tggaaatcga tctactccta ggttttgtat ggactttctc
     1921 atggcaccat tttattatgt cattcttttt aatacagatc cttatgggct caattacggt
     1981 caaatatttt attatattcc ttttataact ggtttagcaa cattatcagg actcttcaga
     2041 tatatcctag aaactcgtaa aaccacggta attgtcaaag aaggtataaa ggatagaaaa
     2101 ggaaatgtaa gcattagaac aaaatttatt agaattagtg gtgaaaaaaa agaattaatt
     2161 tttaccttca tattatttat aaattttttc ctaattggct tttttcatta tctatatcta
     2221 aattatcttg aaaatgataa aactcaaatg gtagctgatt caaaaacaaa tacaaaaaaa
     2281 attaatgcta atataatgac aagttttgta gaaatatctt cgataataat atggagatgt
     2341 attaggaatg agttattacg agaaattctt tcatattaag ttattatatt gtaattatca
     2401 tgagtaatga attaaatgat caaaatatcc aaaggatatt gtttttagtt tactttgatt
     2461 tattgaaatt ttttatagtg acagaatatt ttttcagcat aattatcaaa acgggctcgg
     2521 agggcttcga gtatgacatg taattgggat ctgcttttta caaattaaaa ctttaacttt
     2581 tgaaactaaa tgtaactatt tcaaaaaatt tttttattat gtatttattg atttatgata
     2641 gattatctca gtcaaattat agattacact ttttctaaac aaattcataa caactttttc
     2701 acatgagtat aaacttgtga atgtgaaaat ggagatatat cgattgttgg tgacaaaata
     2761 tttggtatta atgtcaaagg acttttagcg tacatagtat taaaattcta aaagttgtta
     2821 aatgtgattg gggtaatacc aatagtgttg aagaaataag agtctattat agatatacta
     2881 ttactttgta tttgactttt atttaaaact atatataatt actaccatgt ttattagcaa
     2941 ctacttactt aaatttaaca atgaataaaa aagacaataa atcttcgttt catttttcat
     3001 tctgttttat aacaatattt tttactattc ttgttgcaat cttcatagtt attgagtcac
     3061 caatattaaa cacaaatcat attgcaatag cacaacaaca agaacaacag caacaacagc
     3121 accagcggca gcaacagcaa gtaaatacaa ctgagagcac taatcaaata ttatctcctg
     3181 ctaaacaaca aacatcacct tttattgaag atatatattt tgatattgat aatgttacct
     3241 tttcacatca tattgcatct gtgaatggta ttcaaatgca ctatgtagtt ggcggtaaag
     3301 gagacccaat agtcttgttg catggttggc cgcaaacatg gtatgcatgg agacacataa
     3361 tgccagcttt agctaaaaat tatactgtca tagtgcctga tcttagagga ttaggtgatt
     3421 cttcaaaacc gcttacggga tatgatggta agactactgc agaagatata tatcaattag
     3481 tatctcaatt gggattcaaa caaatctttt tgataggaca tgatatagga gcacagacag
     3541 cttattccta tgcagcagtt catcctaata atgtaagcaa actagtgata atggaactta
     3601 ctttcccagg ttatatgcca ccatctcttg ggagtactgg actttggtgg gtttctttgc
     3661 atcagacacc agatatacca gaaattcttg tacaaggtaa agagcgggaa tatctaactt
     3721 ggttttataa agagcttgca tacaatccct cagctattac caaagtcgac atagacgaat
     3781 ttgtcagtca ctattctgct ccaggtggta tgcgagctgg ctttgagtat tatagagctt
     3841 tcccacagga tgcaaaagac aacattgaat tagcagctac agcgaagctt acaatgcccg
     3901 tacttgtcct atctggtgat atatatccag ctttaggagg tgacattcct gggagcatga
     3961 cattaaactc tatacaatct ctggctttag ctacaaatgt gcaaggtgta atagttccat
     4021 attcaggaca ctggattcca gaagaacgac cagatttctt actagaccaa ctttcaaaat
     4081 tcattggaaa tagtagtaat gatagtaaat agaatatctt ataagataat tcaatttttc
     4141 tttgacactc ggattcactt agaaaagcaa taaagatggg tgggagtaga atcgtccatg
     4201 tagtgggatt ctactacttg gtatttagct tttattatta taaccatatt gttaaattat
     4261 tttttgaaaa taaattaggt agttggctct ttaaccttac caataaacag tttacttttt
     4321 ttgtatatat caaaattctt tatgatactg ttctttggaa tctttattcc tagtgaacta
     4381 catattttta tcttatttag agttaattaa taaatgttct aaaaataata ttgttaatat
     4441 atcaaataaa accagatata ttaaaaaaaa tgacatctga ataaatgaaa gattttaatt
     4501 cattcaaaag aaactacaaa tatttagaaa tgtgctaatt ttttacactg ttcgataaca
     4561 tcagagtacg tgattagagg tactattttt aatgcattac ttttacctac atttggtgca
     4621 aagaatgatt gtattaaatg agcatcatta gcttcaacga cccataaaaa agtatgttct
     4681 aaacctgagt gatattggtt aattattttt atgttttgtt tacttgcttc ctcaactatt
     4741 ttaggaccat gttctaatac taattttcta gtttcagcat tattcaacag acatgcttct
     4801 gtagtgtgac cgccatagat tccataagcc cataattatt aatatggttt agtttataaa
     4861 tattgtttgg tttgtttgcc ttgtaaatat ttataaaact cttaataact ctaaatttga
     4921 cctgttatcc agtttcctaa ctttttccag aatatcatct taatcataga aataagttat
     4981 agttaattat gagcataaaa ataaaactaa aatagatatc aactaatttt tgtttgtaat
     5041 taagatataa aagttaatca atttcaagta atactatttt atactctgat ctttctggca
     5101 tttgtacaaa cattggtttg actttttcca ctagattaaa taaaatatcg ttacctttag
     5161 aataatactt ttcaatatct tctatagtct cccaaaaggt tagaacaata atttctctat
     5221 cattttctat attctccaaa attgaatatc cttgatattt cccaatatat tttcaaaaaa
     5281 attctttgaa aatttccgta gccttttttg ggtctaactt tgttatactt tttgtattct
     5341 aacttgttat caatcaatat cgtaatttag gtttattaaa aggctccaga tactaattaa
     5401 tccaactaat atttacttta ttaatatatc ctatttaaga taattatata atagtaatga
     5461 aacatcaggt aatcattcca caatttctac gtaatgaatc tattagaaat tatatcccgc
     5521 aaaccctcaa aattcaaaaa agagatacca ttacatggat taatacggat agtgaatctc
     5581 accatctcta ctttattaaa attgatcctg acccaacaaa tattgaagta ttagatgaaa
     5641 ggctatatct aaaatcagga gaattaggag aagtcatgtt taattataat tatgaacgaa
     5701 tagattatgt atgtaaaa
//
LOCUS       DATIAS010000043         2287 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_418697, whole genome shotgun sequence.
ACCESSION   DATIAS010000043 DATIAS010000000
VERSION     DATIAS010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418697"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            415..1389
                     /locus_tag="VLA74_00870"
     CDS             415..1389
                     /locus_tag="VLA74_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HSF49285.1"
                     /translation="MKSHESYDDKFTSILNDGLLWIDVRNPTREKMFNLGRKYSFHEL
                     NIEDCLSKIQIPKIDKYEDHVFVTLHFPAGSNGSKIPRISQLSIFIGSNYLITVHQGD
                     LKPLAEMFDLCKKEQNNEYRQIMMGRSSGYLLHTIIDALVDDLFHILMKVIGNLDDIE
                     DAVYDEKAAIAREISLLRREITTMRRVLIPLKRIIVSLTRDIQKFSEEDLTPYFDDIK
                     DHIDKVLDSLEESKETIEIYKDTDFMLSTEKTNKIIAILTVMFTLSIPITIISTIYGM
                     NISLPGSDLKFLGSYTTLIILLIISVVLTITMFLYFRTLGWIGGFSRL"
     gene            1414..>2287
                     /locus_tag="VLA74_00875"
     CDS             1414..>2287
                     /locus_tag="VLA74_00875"
                     /inference="COORDINATES: protein motif:HMM:NF017442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF790 family protein"
                     /protein_id="HSF49286.1"
                     /translation="MLPSELLRIKITNKGKKIMPLFCSIEDIAIAQKLINEFQTSYDN
                     KDTKAILEKNLSSIESEYRDFKLIRGLAVLLERRTVFSLNKNFHNPDSINRQGLLAQP
                     QKSSFTLRKILFEESAKEGLALDYDRRTKILERAASRLGISHKYLEKAMWIDREDNLI
                     VESFKKISPDKLLELYNLSLLQTLFFNCINFEFSIQGGKEWKYVLRKIKRFGLMYNLK
                     LVDQALEKGKHKFTDILDSSTNNDFINENKIVQNTADNYILCSIDGPLSIFRLTNKYG
                     VLIAKIIPEIIYSCK"
BASE COUNT          863 a          299 c          343 g          782 t
ORIGIN      
        1 aatagtatta taagattctg gcgactgact aaagatggag atttaatagc actggtcttc
       61 cttgaataaa atgctgtttt acacagatat agatatgata actaataaaa gatattgtta
      121 ttctttgaga cgactttcaa agacatatac aaacacaatt acaaaataaa atcaaccatc
      181 ctccttctga aataatattt gttaaaatca tccgattgat atattgatta tcaagaatgc
      241 ttctttgttt tgatattatt tacatattta ttatataatt ttctttcatt tttaatttta
      301 gccatgaaat gatgaaaaat ttcattaatc taaatataaa atcttttttg ataatatact
      361 ttgaaacaac ttatattttt gtatgattaa attgtaataa ggtaatcttg atgtatgaaa
      421 tcacatgaat cctacgatga taaatttaca tctatcctga acgatggttt attatggata
      481 gatgttagaa atccaacaag ggaaaagatg tttaatcttg gtagaaagta ctcttttcat
      541 gaattaaata tagaagactg tctttcaaaa attcagatac caaaaattga taaatatgag
      601 gatcatgttt ttgtaacttt gcattttcct gctgggagta atggtagtaa aattcctcga
      661 ataagtcaat tatctatttt cattggttca aattatctta taactgtaca tcaaggggat
      721 cttaagccat tggctgaaat gtttgattta tgtaaaaaag aacaaaataa tgaatatcga
      781 cagataatga tgggaagatc atctggttat ttgttacata caataatcga tgccttggta
      841 gatgacctgt tccatattct gatgaaagta ataggaaatc ttgatgacat tgaagatgca
      901 gtatatgacg aaaaggctgc aattgcaaga gaaatttccc tattaagaag agaaattaca
      961 accatgcgaa gagttctgat accattaaag agaattattg taagcttgac acgagacatt
     1021 caaaagtttt ctgaagaaga tttaactcca tattttgatg atataaaaga tcatatcgat
     1081 aaagttcttg attccttaga agaatccaag gaaaccatag aaatttacaa agatacagat
     1141 ttcatgttga gtacagaaaa aactaacaag ataattgcaa ttctcactgt catgtttaca
     1201 ctttctattc caattaccat aataagtaca atatatggaa tgaatatttc tcttccaggt
     1261 tcggacttga aatttctagg atcttacact acgctgatta ttttgctaat aatttcagta
     1321 gttctaacta taacaatgtt tctctatttc agaacattgg gttggatcgg cggatttagt
     1381 cgtctctgat ttttatcaat tgtttgtttt tatatgctcc cttcagaatt actaagaata
     1441 aaaattacca ataaaggtaa gaagatcatg cctctttttt gttcgataga agatatcgct
     1501 atcgctcaaa aattaataaa tgaatttcaa acatcctatg ataataaaga tactaaagca
     1561 attctagaaa aaaacttatc atcaattgaa tcagaatatc gagatttcaa attaattcga
     1621 ggattagctg ttcttttgga gagaagaaca gtattttctt taaataaaaa ttttcataat
     1681 cccgattcaa ttaaccgaca aggacttcta gctcagccac aaaaaagttc ttttacgttg
     1741 agaaaaatat tatttgaaga atccgcaaaa gaaggcttag ctttagatta tgaccgaagg
     1801 accaaaatat tggagagagc agcatccaga ttaggtattt cacataaata tcttgaaaaa
     1861 gccatgtgga ttgatcgaga agataatctt attgtagaat cctttaaaaa aatatctcca
     1921 gataaattat tagaattgta taatctttcc cttttacaaa cattattttt taattgtata
     1981 aattttgaat ttagtattca gggaggaaaa gaatggaagt atgtattaag aaaaatcaaa
     2041 agatttggat taatgtataa tttaaaactt gtagaccaag ctttagaaaa aggaaaacat
     2101 aaatttactg atatattaga ctctagtact aacaacgatt ttataaacga gaataaaata
     2161 gtacaaaata cagcagataa ttacatattg tgttctatag atggtccgtt aagtattttt
     2221 aggttgacta ataaatatgg agtattaatt gcaaaaataa ttcctgaaat aatttattcc
     2281 tgtaaat
//
LOCUS       DATIAS010000044         2907 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_690993, whole genome shotgun sequence.
ACCESSION   DATIAS010000044 DATIAS010000000
VERSION     DATIAS010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_690993"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VLA74_00880"
     CDS             <1..360
                     /locus_tag="VLA74_00880"
                     /inference="COORDINATES: protein motif:HMM:NF028226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter dimerization
                     domain-containing protein"
                     /protein_id="HSF49287.1"
                     /translation="ESFEKMVKKEIQEIENITSHIEIDTSEDIKTMGVEKRVAESYVD
                     KIKRLCLEVQGVVDCKDVGIVDMNGNQHITLTILIKFSKTSKISLQEAHEIATSVQER
                     IIKETDATRVVVHTEPI"
     gene            532..1482
                     /locus_tag="VLA74_00885"
     CDS             532..1482
                     /locus_tag="VLA74_00885"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSF49288.1"
                     /translation="MVVKSKKAVYAALLGNLGIAIAKLLAALYTGSSAMWAETYHSFS
                     DTMNQVLLLIGIKSSSRPASERHSFGYGKEQFFWSFLVSTMIFGISGVLSLQQGLESL
                     LGKPHIIENIEINYIILAISAIFELNALRIAFVIFSKNIHARGQKLTVKTILNEFRES
                     KDPTILTVLVEDSAALLGIAIAAIGISLSHLTGNVFYDSISSLIIGFVLMGFAFFLAK
                     ENKALLIGESITKKDSNRIIKSILTLSEVNRVISMRTMHLGPEDVIVAIEVSLVDNLV
                     TDNIEILIDKIEQKVIQVIPYVNPSKIYVELQDDKSLNKL"
     gene            complement(1661..2053)
                     /locus_tag="VLA74_00890"
     CDS             complement(1661..2053)
                     /locus_tag="VLA74_00890"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HSF49289.1"
                     /translation="MVENIFEGFYGKKYINLQTFKKNKQIVSTPVWFVLKNNELFFRS
                     DANSGKVKRIRNNNNVKISICDIRGNIKGQTYTGIANFQDESIYNEINSLFDKKYSLL
                     SPILKIVYKLRKINIVILSISLNINISK"
     gene            2331..>2907
                     /locus_tag="VLA74_00895"
     CDS             2331..>2907
                     /locus_tag="VLA74_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49290.1"
                     /translation="MKITIISNIALDRIINQDGQIIESLGGPPCYCGLTSQQFGFKVE
                     LVSKFGKDLKDKHLSFFKENDLNLHKNISSEKPTTRFTIKIMQNGREISLSARGDSIS
                     LSDVENIKTDCWLISPILDEIPEEVLNYVIHKDDKFVMLDPQGYTRYVGNEGRILTRK
                     GLDFSLQDIDAIKLDPDELECISGTTDFIEAQ"
BASE COUNT         1022 a          410 c          455 g         1020 t
ORIGIN      
        1 gagtcttttg aaaaaatggt gaagaaggaa atacaagaaa ttgaaaatat cacatcgcac
       61 atagaaattg atactagtga agacattaaa actatgggag ttgaaaaaag ggttgctgaa
      121 tcttatgtag acaaaataaa aagattatgt ctcgaagtac aaggcgtagt agattgcaaa
      181 gatgtaggta tagtggatat gaacggaaac caacacatca cgctgactat actaattaaa
      241 ttttccaaaa cctcgaaaat atctttacag gaagctcacg aaatagcaac aagtgttcaa
      301 gaaaggataa taaaagagac agacgcgact agagttgttg ttcatacaga accaatttga
      361 atatgagaaa aaaatctact agatattctt attctatact tatgcagttt ttttattggt
      421 acaaataact tttagaagga ctcatttttt atctgttctt aaaaatctac ttgagatgaa
      481 tattcaaaaa cattaattat ctagtttagt taatattatt taatccaata attggttgta
      541 aaatctaaga aggctgtcta tgctgcatta ttaggtaacc tcggaatcgc catagcaaaa
      601 ctcttagccg cactttatac cggaagtagc gccatgtggg cggaaactta tcattctttt
      661 tcagatacaa tgaatcaagt tttgctatta attgggataa agagcagctc tagaccagca
      721 agcgaacgac attcttttgg atacggtaaa gagcaatttt tttggtcatt tcttgtgtcc
      781 acaatgatct ttggcatatc tggagtttta tctcttcaac aaggattaga aagcttactg
      841 gggaagcctc acataataga aaatatagaa attaattata tcattttggc gatttcagct
      901 atttttgaat taaatgctct aagaatagct tttgttatct ttagtaaaaa tatacatgcc
      961 cgcggacaaa aattgaccgt taaaacaatt ctgaatgaat ttcgcgaaag caaggatcct
     1021 accatcctca ctgttttagt cgaagactcg gcagcgttat taggcattgc tatagccgca
     1081 atagggattt cattgtctca tttaacagga aacgtctttt atgattcaat tagttcgtta
     1141 ataattggtt tcgtattaat gggctttgcg ttctttcttg caaaagagaa taaagcctta
     1201 cttattggag aatccatcac aaaaaaagat tctaacagaa ttataaaatc tatactgact
     1261 ttatctgagg taaatagagt tattagtatg cgtactatgc accttggacc agaagatgtt
     1321 atagttgcta tagaagtaag cttagtggat aacttggtaa ctgataatat tgaaattcta
     1381 attgataaga ttgaacagaa ggtaatacaa gtcattcctt atgttaatcc atcgaaaata
     1441 tatgtcgaac ttcaagatga caaaagccta aacaaattgt agtgttctta atttaaatag
     1501 ataaattcat ggctataaaa tttaaaacat attttctatt tagctttgtt cgacccatcc
     1561 aatttttctt taattaattt gtattataat aacaccaggg ctcatgcatt taatgcctta
     1621 gcagttaata atattgtatg tcaaaaagtt ttaaaatgaa ttatttactg atattaatat
     1681 tcaaggatat ggacaatatt acaatattaa tttttctcaa cttatagaca atttttaata
     1741 ttggcgacag caaactgtat tttttgtcaa atagggaatt gatctcatta tatatagatt
     1801 catcttgaaa attcgctatt cctgtatatg tttgtccttt gatatttccc ctaatgtcac
     1861 aaatagatat ctttacgttg ttattgttcc taattctctt gacctttcca gaatttgcat
     1921 cagatctaaa aaataattca ttgtttttta atacaaacca gaccggagta gaaactattt
     1981 gtttattttt tttaaaggtt tgtaaattaa tatatttttt accataaaat ccttcaaaaa
     2041 tattctcgac catttgattc tgtttttata taatgtttcg ctgtatttat ttattatttg
     2101 taaatcaaat atctatctat ttattgatca ttatttttag agcaatttat tttatatcta
     2161 ttttattaaa tgtgtctaaa taataactga attgaaactc tcgatacctt ttaaattcta
     2221 tatatcgttt atattgacta tacctataaa tcttgtgttt actattttta ccaatatact
     2281 aatagtatag gttaatatta acattgaaag aatattaggc aattatattt atgaaaataa
     2341 caataatctc taatattgct ttggatagga taattaatca agacggacaa attattgaaa
     2401 gtttgggagg acctccgtgc tattgtggcc ttacatccca acaatttgga tttaaagttg
     2461 aactagttag taaatttgga aaagacctca aagacaaaca tctatcattc tttaaagaaa
     2521 atgatcttaa ccttcataaa aatatttctt ctgaaaaacc tactactaga tttactataa
     2581 aaattatgca aaatggtaga gagatttcct tatctgcaag aggagattct atttcgttat
     2641 ctgatgtcga aaatatcaaa acggattgtt ggcttataag tccaatattg gatgagattc
     2701 cagaagaagt tttgaattat gttattcata aagatgataa atttgtaatg ctagatcctc
     2761 aaggctacac acgttatgtc ggtaatgaag gaaggatttt aaccagaaaa ggattagatt
     2821 tttctcttca agatattgat gcaataaaat tggatccgga tgagcttgag tgtatttctg
     2881 gaactacaga ttttattgaa gcgcaaa
//
LOCUS       DATIAS010000045         2119 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_146819, whole genome shotgun sequence.
ACCESSION   DATIAS010000045 DATIAS010000000
VERSION     DATIAS010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146819"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1348
                     /locus_tag="VLA74_00900"
     CDS             <1..1348
                     /locus_tag="VLA74_00900"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GH116 family glycosyl hydrolase"
                     /protein_id="HSF49291.1"
                     /translation="LLKHVETLDMFVTNTTQYISKSSEPGGYYTATWMRDASYILKDQ
                     FISGYIPQTIEELSFIWSNQIEYNTSRLICGRGSPSNNFTPIRCDPKSIKKYYGALPT
                     TIYSSFSEIYATEPDIDSTALMIYTTSWILSHIYEHINSIKNDSFDIKPLTHESYLKT
                     EFSKLTVELIPKIFKAIDYLVTKDIDNDGILEQNPNEDWMDTALRDGKIVYSQACWIL
                     ALKSFVVLLNSLEKSEDAKKLDRIAQNSIASIEKQLWSDKQECYVDKIGDNETYYVEN
                     MVTQDSLLYPFALVNDNFLTESNLLYNSDATEFNKWCTISKENLLKCNKMLHSVKRKI
                     WNRIPTITEKPLLKTGPYIHKPYNYHNHTFWPWITGIELMTRIRFNQIDECEKMISKL
                     FLSNSNNDNLLFEWVNPLTHVGYGAYPFRTGISSLRLVIFDIFRILGVKIGEIRTN"
     gene            1701..1973
                     /locus_tag="VLA74_00905"
     CDS             1701..1973
                     /locus_tag="VLA74_00905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49292.1"
                     /translation="METNTIEMLILIKYDGDLLREKKLLTTCCPLFKQALKKNLIGVS
                     NYDLKDLKIYLIDTLGYAGENNLELYELPISYCPFCGIKFRIKSVL"
BASE COUNT          789 a          320 c          316 g          694 t
ORIGIN      
        1 actcttaaaa catgtggaaa cattagatat gtttgtgaca aatactactc aatatattag
       61 caaaagttct gaaccaggag ggtactatac tgctacatgg atgcgagacg cttcatatat
      121 tttaaaagat caatttattt ccggatatat tccccaaaca attgaagaac taagttttat
      181 ttggtcaaac caaatcgaat ataatacttc tagattgatt tgtggccgag gatccccttc
      241 taacaatttc actcctatta gatgcgaccc caagtcaatc aaaaagtatt atggcgcctt
      301 accaactact atatattctt cattttcaga aatttatgct actgaacctg acatagattc
      361 taccgcacta atgatatata ccacttcatg gattctttca cacatttatg aacatatcaa
      421 ttccattaaa aatgatagtt ttgatataaa accgctgact catgaaagtt atctaaagac
      481 agaattctct aaattaacgg tcgaattgat ccctaagata tttaaggcaa tagattatct
      541 cgtcacaaaa gatattgata atgatggcat actggaacaa aatccaaatg aagattggat
      601 ggatactgct ttaagggatg gaaaaattgt atatagtcaa gcttgttgga tattagcatt
      661 gaaaagtttt gtagtcctcc taaactcctt agagaagtct gaagatgcga aaaaattaga
      721 tagaatagca cagaattcta ttgcatcaat tgagaaacag ctttggtctg ataaacaaga
      781 atgttacgta gataaaattg gtgataatga aacttattat gttgaaaata tggtgactca
      841 agattccctt ctttatccat ttgcactggt taatgataat tttttgaccg aatccaattt
      901 attatataac tctgatgcta ctgaatttaa taaatggtgt accatcagta aagaaaatct
      961 attaaagtgc aataagatgc ttcactcagt aaaaagaaaa atttggaatc gaattcccac
     1021 tataacggag aaacctctgt taaaaactgg cccctatatt cacaagccct ataattatca
     1081 caatcacacg ttttggccat ggattactgg tattgaactg atgacaagaa ttaggtttaa
     1141 tcaaatagac gaatgcgaaa aaatgatatc aaaacttttt ctaagtaatt caaataatga
     1201 taatcttctt ttcgaatggg tgaatccctt aacacatgta ggatatggtg cttatccttt
     1261 caggacaggc atttcatcat tacgtcttgt tattttcgat atttttcgca tacttggtgt
     1321 taagattggt gagataagaa caaattgata attgattagt aatatccagc atttatttat
     1381 tttattgtct actttcatcg ttataaaaat ataatcttga caaaaaaaaa tatgaattca
     1441 cctggaatta gtgcttgtaa ggatctaatg tggaagccgg tattattatt atatttctct
     1501 tgataaatga tattaaaaaa tgaagaaaaa aatacacaac caaattagct gacgcatcgc
     1561 agtatttgaa gtaactatca gattcatatc cacatgaatt tccaagaaac ctaatttcga
     1621 atcgtggtat atacataatt tgaaatgaag ttatacagaa agacctaata tagatgttgt
     1681 atataattta atcaaagaat ttggaaacca atacaattga aatgttaatt cttatcaaat
     1741 atgatggaga tttattaaga gaaaaaaaat tattaacaac atgttgccct ttgtttaaac
     1801 aggctttaaa aaaaaatctg atcggtgttt ccaattatga tctaaaagac ttaaaaatat
     1861 accttatcga tactttaggg tacgctggag agaataattt agaattgtac gaacttccaa
     1921 tttcatactg tccattttgt ggaataaaat ttcgtattaa atcagttctc taaaattaaa
     1981 acataaaagg aaataagctt ggatgtgaca atatttattc attgcaaatg taatatatac
     2041 tgcattttag aatttcacat atacataatc taaataaaaa ctgacatact acaattatac
     2101 atattctgca gttacaaat
//
LOCUS       DATIAS010000046         3101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1100032, whole genome shotgun sequence.
ACCESSION   DATIAS010000046 DATIAS010000000
VERSION     DATIAS010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1100032"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            478..648
                     /locus_tag="VLA74_00910"
     CDS             478..648
                     /locus_tag="VLA74_00910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49293.1"
                     /translation="MEKTFSLIRPSIETSKKAKFCVTCGKLATQEAFFNVGDGAILIE
                     RYCDICADKEIP"
     gene            complement(999..1490)
                     /locus_tag="VLA74_00915"
     CDS             complement(999..1490)
                     /locus_tag="VLA74_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49294.1"
                     /translation="MIKILHIADPYQVTLNDISKLEQACNTKLNIYEKVLLVNNGTTE
                     QVLQVLLNTPTKIKVIRQNESNFIMRRESNIISNDKIKKVLSSAISRIYVKRIPLEII
                     NEIRLGRSGIGMIMMKYQLETFKKILKIGYNSSKQNIFREYKLFHNYINICDINETFV
                     MRF"
     gene            complement(1523..2227)
                     /locus_tag="VLA74_00920"
     CDS             complement(1523..2227)
                     /locus_tag="VLA74_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49295.1"
                     /translation="MNESTRINEWFVPNFGPVKFRAFIGLLFLPYTGMCISFTIIGSM
                     LSPTIYWDRVVAIFTIYFLALGISAHAADNLGSKKIKPWGNYFSKIELKIMVIVGLSI
                     AYIIGIYYVITSVNLLLFIGIIEGFFLFAYNFELFRGIFHNNFWFALSWGSLPLLAGY
                     IMQTNTISELPLILALFTFLVSFLEIRYSREYKEIKRKNCDNKKSRKLESRLKLLSSS
                     TISICIILVIYRIFFL"
     gene            complement(2224..2898)
                     /locus_tag="VLA74_00925"
     CDS             complement(2224..2898)
                     /locus_tag="VLA74_00925"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49296.1"
                     /translation="MNFNGYTLPKKFFSSDNALSYDLVVKYTTFGKDSSWKRHIMKNV
                     KGEHIRILDLACGTGICSTFIPSSNLEMFGADMTYDYVIKAKNRMRYSFLTNCVAEFL
                     PFQSDTFDVIISSYLAKYANIPLLVDELWRIIKKNGSIIVHDFTYPTNFFMQNMWKSY
                     FVILKVIGKIVKSWELVFSDLDYVIEKSQWIKDLVEALEKKGFKSVNYKHYTYGTAAI
                     VSAIKS"
BASE COUNT         1136 a          467 c          408 g         1090 t
ORIGIN      
        1 aataaactta ccaacttttc ttgatcttgg gtaaagcatt ctattttaac taaattagtc
       61 gttctaaaat actgtaaaaa tatagaaata gccgtaaata ttttatcata tatgagtatt
      121 tataacaagg acatacagaa aatattttcg gaatacttgt tcagagcttc ccataaaaag
      181 tgatatcttc ttttcaaaca taactgttag gctatataaa ttataggcat ttcacagact
      241 tgtcttaact atttgcataa gtttataaaa tttttttttg aataaaactg aatgctacat
      301 cctaatgtag gtataactgg tcttgtataa ctgaccttgt attagacaag ttcatataga
      361 catactaacc acatagatca atgaacgaaa gtacgaaatt gattgatgaa attgctcaag
      421 tcttatctcc tcaggccatt acatgtaaca gaagatgcat aggaggagaa taataaaatg
      481 gaaaaaacct tttcattgat aagaccgtct atcgaaacaa gtaaaaaggc aaaattttgt
      541 gtaacctgtg gtaagttagc tactcaagaa gcatttttca atgtaggcga tggggctatt
      601 cttatagaaa gatattgtga tatttgtgcg gacaaagaga ttccgtaata gtcacaaggt
      661 catttatcaa aaatttaaga ttgttgcagc ataacacaat aatgatcgtt tctaaattct
      721 gataatatat aacaattact caataatcat aaatagatat tttggttgtt cataattttt
      781 accttcttta aagaaaaata ataattgtaa taagaaaatt catcataaga taagcagatt
      841 tactataaaa gtattatcat gtattaacca atcttcagca aagagtttga ttgagaggaa
      901 agtgttgaat aaataagata ataaatttag gaagaaaaga tggaaactat aatatagtaa
      961 aatatacaat acactctcca atttaacgat attataaatt aaaatctcat cacaaatgtt
     1021 tcatttatat cacatatatt aatataatta tgaaacaatt tatactccct aaaaatattt
     1081 tgtttactag aattatatcc gatttttagt attttcttaa atgtttctaa ttgatatttc
     1141 atcattatca taccaatccc acttctaccc aatcttattt catttattat ttctaaagga
     1201 attcttttga catatattct agaaatagct gatgataata ctttttttat tttatcatta
     1261 gatatgatat tagattcacg cctcataata aaattcgatt cgttttgtct gattacttta
     1321 atcttagtgg gggtatttaa taaaacctga agtacttgtt ctgtagtgcc attattcact
     1381 aacaagactt tttcataaat atttaattta gtgttacatg cttgttcaag tttagaaata
     1441 tcattcaatg taacttgata aggatctgct atgtgtaaaa tttttatcat atattatcta
     1501 ctatttactg aaatttaaaa tcttataaaa agaaaattct gtaaataaca agtattatgc
     1561 aaattgaaat tgtggaggaa ctgagaagtt tgaggcgtga ctctaatttc cttgattttt
     1621 tattatcaca attttttctt ttaatttctt tgtattctct ggaatatctt atttcaagaa
     1681 aagaaactaa aaacgtaaat agagctaaaa ttaatggcag ctcagaaata gtatttgtct
     1741 gcattatata acctgctaat aagggtagac ttccccaaga taaggcaaac caaaaattgt
     1801 tatgaaaaat acctctaaaa agctcgaaat tataagcaaa taagaaaaat ccttctatga
     1861 ttccaataaa taataacaaa tttaccgaag ttattacata gtaaatccca ataatatatg
     1921 caatagaaag accaactata accattattt ttagctctat ctttgaaaag taattacccc
     1981 atggtttaat tttttttgaa ccgagattgt ctgccgcatg cgctgatatt cctagtgcca
     2041 aaaagtatat tgtaaatata gctactactc tatcccagta tatcgtaggt gaaagcatag
     2101 atcctataat ggtaaatgaa atacacattc cagtatacgg gagaaacaac aatccaatga
     2161 atgctctgaa ttttactgga ccaaaatttg gtacaaacca ttcattaatt ctggtagact
     2221 cgttcatgac tttatagccg atacaatagc agctgttccg taagtataat gtttgtaatt
     2281 aacagatttg aatccctttt tttctaatgc ctctacaaga tccttaatcc attgactttt
     2341 ttcgatgaca taatctaggt cagaaaaaac taattcccac gatttaacta tttttccaat
     2401 tacctttagt attacaaaat atgacttcca catgttttgc ataaagaaat tagtaggata
     2461 tgtgaagtca tgaacaatta tcgatccatt tttcttgata atgcgccaga gttcgtccac
     2521 caaaagagga atatttgcat acttagctag gtatgaagat attattacat caaatgtgtc
     2581 agattgaaat ggcaaaaact ctgccacaca atttgttaga aatgagtacc tcattctatt
     2641 ttttgccttt ataacgtaat catatgtcat atcagctcca aacatctcta aatttgagct
     2701 tggaataaat gtagaacaga tccctgttcc acatgcaagg tctagaatac gtatatgttc
     2761 tcctttaaca tttttcataa tatgcctttt ccatgatgaa tcctttccaa aagtcgtgta
     2821 ttttacaacc aagtcataac ttaatgcatt atcagaagaa aagaattttt ttgggagagt
     2881 atatccgtta aaattcattc tatcataatt attacttatc tataatataa tgttagatat
     2941 catctaaata tctcgatttg cttgaggatt ttcaagataa attagataaa tcatcatttc
     3001 tcttatatta ttgtaataat gagattcaaa ctttaagccg cacaaaccta aatcaatacc
     3061 aaaccatttc acatataaaa tgtaaaaaca atcctgtttt g
//
LOCUS       DATIAS010000047         7052 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_964276, whole genome shotgun sequence.
ACCESSION   DATIAS010000047 DATIAS010000000
VERSION     DATIAS010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7052
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964276"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3733)
                     /locus_tag="VLA74_00930"
     CDS             complement(<1..3733)
                     /locus_tag="VLA74_00930"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49297.1"
                     /translation="MERFNFDELAIEDETLHLDIRNIESKSRDYKEWNKLAKDLIDRG
                     NRYKFFYEKSKSEYANEKLKSIYGKSIVCSDKSIELDPRNIDAWYNKGLALNNLAEYK
                     EAIKCYDKVIEIDPDYFPVWNLKGNALNYLGKFQEAIKSYDQVLEKDPQNIIAFYNKG
                     LALSNLGEYEKAIKCYDRVIEIDHENIDALNTKGLAFERLRKFEEAIKCYDRVIEIDH
                     ENIEALNSKGYALDRLERYDEAEQYYKKVSEEYLNEINDMNERAKECQNLHKYDEAIM
                     YYDRVISIDANNSNAWLKKGVLLYNLDKYEEAIDCYNRVIGLDKYKEKLKKEGQKLTD
                     KQVIEYYKSIETNPRNIEALNEKGLALEKLGKYDDAIQLFDLIIEKNPPFTIDTIIKK
                     GDIFMKLENYQAAEKSYNDALKYDPHNIPALNKLHTLYSNYTFQYDKAISVSQLLLEN
                     LSVSQTQNSDKLINYVYTKSQRKKNIQAKQKKLLNEEILDAKFLLSEDFIKNSNYKQG
                     RKIAKETIKDIPKESIKRQIITRFLIIASYLLQGKKDEGILELDKFLTYYRNLDIDIK
                     IEENQWNFKGIINAINENKNIDGAIGKELNQFNDNLSTKSILRNLIDLLCGFTDSYKI
                     LLKTTVETIDIIYKKKIRKKIIKTAIISLVVVAALSIIYVQMVVPESCSVPESRQINI
                     GNVGSAPIGIDFNPNDNKAYVANEKDSTISIIDCNVPRYYNIFKQYFGFDTFDTQLQV
                     EGKTISLDYPPSGIAVNPTTNKIYVIHQLPSPSLSIIDGNNNYQKLRNIPMGNPLDIA
                     INPITKKVYVTNSIDGNVSVIDGETDKWITDINVGGKPLNVGINPTTNKIYVTHEGSN
                     NVNVSIIDETKGKKEKDYIKNIFFNKMAADLNINSKTNKVYVTHPITNTISIIDGISD
                     TKIKEEIDVGDKPIRIDIDEDTNKVFVVNQNSDSVSVINGTTNIIIKTLKIPGDKPYD
                     VEFNSDINSAYIINMGSNSRSTVDIMKYDDGNQLNYIHVGDKPVDIDVNPETNKTYVV
                     NYDNDTLSIINSTNRVEDTIDVGDKPRSVAVNPTTNKIYVTHQTPSPSLSVIDGNNNY
                     QKLRENIAVGKDPLDIAVNTNSNKVYVANYGDGTVSVIDGKTDQFINKSMDVDENPLS
                     IDVNPNTNKVYVGYSNNFHLSVIDDKSNRLLRDINDEPVKIGLFYPCPSDIAINQEKN
                     HTYVSFDCKDHIFLINESDEVIPTKASTLGTNNTNIVFNP"
     gene            complement(3748..5088)
                     /locus_tag="VLA74_00935"
     CDS             complement(3748..5088)
                     /locus_tag="VLA74_00935"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSF49298.1"
                     /translation="MENENEKESRKAIIIGINEYQFDPAIPPLDGAENDAKEIRDKLI
                     QYGNFEISNDHYLVGPNATRSNILTAVSDIFRQDEKCNLVAFYFSGHGVPDLPTMDGY
                     IAPYDYNPKDPIINGINMAELKKAIYNTKNIANTIIILDCCYAGIATTDMAKSKKAPQ
                     TKMAPQEQEKKRNLFSINVEKMIESSTNQGQGKIVLASSEADAVSREKNDCIHGENSS
                     PHSHGAFSYHLIEGLEGGAADPDGIISIESLRKYIEDQMTREGKQKPIYSIAEASNFG
                     NIKIAISQGIFEAKIKKLINEAEELVARPDPRTNLVAIVSLQDAAKKINKLIGLKEDH
                     QEIPRLIDLIDQSLEMYKQPTINWLDSNVIVASEKINEIRDNFYDVELPNLVWSLSFD
                     KLVILSDSYIKALFYITSHVRRNTIFERSDDQKLEVLTNQLRAVFDNEKSTKGS"
     gene            complement(5389..6292)
                     /locus_tag="VLA74_00940"
                     /pseudo
     CDS             complement(5389..6292)
                     /locus_tag="VLA74_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612400.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            complement(6435..6914)
                     /locus_tag="VLA74_00945"
     CDS             complement(6435..6914)
                     /locus_tag="VLA74_00945"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49299.1"
                     /translation="MVTSTTIYNQDIHEKKGEQQKILHKGSNDKVNVFITLLYSLNGI
                     KFTTSKTRNSNDFINHLNSIKRYVLQRSIKRFILVIDNASFHVSNKTKQFIEKQSGDW
                     LTVLFLPTRAPFLNPVETKVNRNLKKDVCANYNYETEYNLLCTVRRYLRCMGSWPKI"
BASE COUNT         2067 a         1165 c          924 g         2896 t
ORIGIN      
        1 caggattaaa gactatgttg gtattatttg ttcctaaagt actagctttg gttggtataa
       61 cttcatctga ttcgttaatc aaaaaaatat gatctttaca gtcaaagctt acatatgtat
      121 ggtttttttc ttgattaata gctatatcac ttggacatgg ataaaaaagt cctattttca
      181 ctggttcatc attaatgtcg cgtaaaagcc tattactttt atcgtcaata actgaaaggt
      241 gaaaattatt actgtaacct acatatactt tatttgtatt aggattgaca tctatactca
      301 gtgggttttc atctacatcc atgcttttat ttatgaattg atctgttttt ccatcaataa
      361 cagaaacagt accatctcca taattagcca catatacttt gtttgagtta gtattaacag
      421 ctatgtctaa gggatcttta cctacagcga tattttctcg taatttttga taattattat
      481 ttccatcaat aactgaaaga gaaggagaag gtgtttgatg agtcacatat attttatttg
      541 tagttggatt aacagctaca ctacgtggtt tatcacctac atctattgta tcttccactc
      601 tatttgtaga attaattata gacaaagtat cattgtcata gttgactaca tatgtcttat
      661 ttgtttcagg attaacatct atgtcaactg gtttgtcacc aacatgaata tagttaagct
      721 ggttaccatc atcatatttc attatatcaa ctgtactcct agaattacta cccatattaa
      781 taatatatgc agaatttata tcagaattaa attctacatc ataaggttta tcaccgggaa
      841 tcttgagagt ttttattatt atatttgtgg taccattaat tactgatact gaatcagaat
      901 tctgattaac tacaaaaact ttgttagtat cttcatcaat atctattctt atgggtttat
      961 cacctacatc gatttcttct tttatctttg tgtcacttat accatcaata attgatatag
     1021 tattggtaat aggatgggtt acatacactt tattggtttt tgaattaata ttaagatctg
     1081 ctgccatttt attgaaaaat atatttttga tataatcttt ctcttttttc ccttttgtct
     1141 catcaattat tgaaacatta acattattag aaccttcgtg ggttacatat attttatttg
     1201 tagttggatt gatacctaca ttaagtggtt taccacctac atttatgtct gttatccatt
     1261 tgtctgtttc tccatcaata actgaaacat taccgtctat actattagtc acatatactt
     1321 tttttgttat tggattgata gctatatcta aaggattgcc cataggaata tttcgtaatt
     1381 tttgataatt attatttcca tcaataattg aaagagaagg agaaggtaat tgatgaatta
     1441 catatatttt atttgtagtt ggattaacag ctataccaga tggaggataa tctaatgata
     1501 tagttttgcc ttctacttgt agctgagtat caaaagtatc aaaaccaaaa tattgtttaa
     1561 atatgttata atatctaggc acattacaat ctataatcga aatagtgctg tctttttcat
     1621 tagcaacata ggctttatta tcgtttggat taaaatcaat acctataggt gcgctgccta
     1681 cattacctat atttatttgt ctagattcgg gtacggaaca tgactctgga acaaccatct
     1741 gaacataaat tatactaagt gcagccacaa caactagaga tataattgct gtttttatta
     1801 ttttcttacg tattttcttt ttatatatta tgtcaatagt ttctacagtg gttttcaata
     1861 atattttata actatctgta aatccgcata ataaatcgat taaattacga agaattgatt
     1921 ttgtactcaa attgtcatta aattgattta gttcttttcc tatggctcca tctatatttt
     1981 tattctcgtt tattgcatta attatacctt taaaattcca ttgattctct tcaattttaa
     2041 tatcaatatc aagatttcta taatatgtaa gaaatttatc taactctaag ataccttcat
     2101 ctttttttcc ttgtaataaa tatgatgcta taattaaaaa tctggtaata atttgtcttt
     2161 taatagattc ttttggtata tctttaatag tttctttggc aatttttctt ccttgtttat
     2221 aattgctatt tttaataaaa tcttctgaaa gtaaaaactt agcatctaaa atctcttcat
     2281 ttaacaattt tttttgtttt gcttgtatat tttttttcct ttgacttttt gtgtatacat
     2341 aattaattaa tttatcacta ttttgagttt gtgatactga tagattttcc aataatagtt
     2401 ggcttacaga tattgcttta tcatattgaa acgtataatt agaatataat gtgtgtaatt
     2461 tgttaagagc aggtatattg tgaggatcat atttaagtgc atcgttataa cttttttctg
     2521 ctgcttggta attttctagc ttcataaata tatcaccctt tttgattatt gtgtctatag
     2581 taaagggagg atttttttct attatcaaat caaaaagctg aattgcatca tcatattttc
     2641 caagtttctc taaagctaaa cctttttcgt ttaaagcttc tatatttcta ggattagtct
     2701 ctattgattt ataatattct ataacttgtt tatcagttaa tttttgtccc tcttttttta
     2761 gtttttcttt gtatttgtcg agtcctatta ctctgttata gcagtcaata gcttcctcgt
     2821 atttgtctaa attgtaaagt aatactcctt tctttaacca agcattggag ttatttgcat
     2881 ctattgatat tactctatca tagtacatta tagcttcatc gtatttatgt aagttttgac
     2941 actcttttgc tctttcattc atatcattta tttcatttag atattcttct gaaactttct
     3001 tgtaatactg ttctgcttca tcatatctct ccaatctatc taatgcataa ccttttgagt
     3061 tcaaggcttc aatattttca tgatctatct ctattactct atcataacac tttatagctt
     3121 cttcaaattt ccgaagtctc tcaaatgcta agccctttgt attaagtgca tcaatatttt
     3181 catgatctat ctctattact ctatcataac actttatagc tttctcgtat tcgcctaaat
     3241 tactaagagc gagcccttta ttataaaatg caatgatatt ttgtggatct ttttctaata
     3301 cctgatcata tgattttata gcttcctgaa attttcctaa ataattaagt gcattacctt
     3361 taagattcca aacaggaaaa taatccggat ctatctctat tactttatca taacacttta
     3421 tagcttcttt gtattctgct aaattattaa gagcgagccc tttgttatac catgcatcta
     3481 tattacgagg atcaagttct atagatttat cagaacaaac tattgatttg ccatatatag
     3541 actttaattt ttcatttgca tattctgatt ttgacttttc gtaaaagaac ttataacgat
     3601 tccctctatc tattagatcc ttggcaagct tgttccattc tttataatct ctcgatttac
     3661 tttctatatt gcgaatatct aaatgtaaag tttcatcttc gatagcaagt tcatcaaaat
     3721 taaatcgttc cattacaatc tcctaattta actgcctttg gtactttttt cattatcgaa
     3781 tactgctcta agttggttag ttaatacttc taatttttgg tcgtctgatc tttcaaatat
     3841 ggtatttcgt ctaacatgtg aggttatata aaataaagct ttaatgtaag agtctgaaag
     3901 aataactaat ttgtcaaagg ataagctcca aactagatta ggtaactcaa catcatagaa
     3961 attgtcacga atttcattaa tcttttctga agcaactata acgttactat ctaaccagtt
     4021 aatggtaggc tgtttgtaca tttctaatga ttggtctatt aaatctataa gtctaggtat
     4081 ctcttgatga tcctccttta aaccaattaa tttattaatt tttttggctg catcttgtaa
     4141 cgaaactata gctacaaggt tagttctggg atctggtctt gcaactaatt cctctgcctc
     4201 attgattaat ttttttattt tggcttcaaa tattccctga gatattgcaa tttttatatt
     4261 gccaaagttt gatgcttcag caatagaata tattggcttt tgttttcctt ctctggtcat
     4321 ttgatcttct atatattttc taaggctttc tatactgata ataccatcag gatctgctgc
     4381 acctccctct aatccttcta ttaggtgata agaaaatgct ccatggctgt gtggagaact
     4441 attttcacca tgtatacaat catttttttc ccttgaaact gcatctgctt cacttgatgc
     4501 taaaacgatc ttaccttggc cttggttagt agatgattca atcatttttt ccacattgat
     4561 tgaaaagaga ttccttttct tttcttgctc ctgaggagcc atcttagtct gaggagcctt
     4621 cttagatttt gccatatcag ttgttgctat tccagcatag caacaatcaa gaataataat
     4681 tgtatttgct atatttttag tattataaat ggcttttttc aattctgcca tatttatacc
     4741 atttataatg ggatcttttg gattataatc ataaggtgca atatatccat ccatagttgg
     4801 taaatctgga acaccatgcc cagaaaaata aaaagcgaca agattacact tttcgtcttg
     4861 tcgaaagata tcactaacgg ctgttaaaat attacttcga gttgcattcg gtcctactaa
     4921 ataatgatca ttcgaaatct caaaattacc atattggata agcttatcac gtatttcttt
     4981 tgcatcattc tctgcaccat ctaatggtgg aattgctgga tcaaattgat attcattaat
     5041 accaataatt atcgctttgc gactttcctt ttcattttca ttttccaaaa actaaagtat
     5101 cacctctcct ctttttcatt cattaaagat ttattacaaa tagtgtttat gcaatttgtt
     5161 actaataaaa tagatatagt tatattttta aggtagcttc ggagtttaac tacaaaagaa
     5221 taattgcagt aagagtcttt taccatttat ttaatgctat tattataggt acattacttc
     5281 tttttatagt tatttataga ttcttgaaaa gtcataaatt ttatcttcta ctactttgtt
     5341 gcataactca tttagataat cattcaatct tccaatacta attgataatt atgtaatggc
     5401 tatgctctga aaccagttat acaatgatac tttcagcatt atctctttta ccatgttttt
     5461 aaatctaata gcagtaacat attctccaat aaacattctc tttatacaag agaagataga
     5521 ctctacaatc catctcttgc catagctgac gctatccttc cattgttgta gatcagtttt
     5581 ctgtaattgt acagccttgt ttctgaggta atgatttgtt tttctgtata tggaattctt
     5641 tcgtaccttt attgctggtc tgattccttt aaacgataat agttggaaat tcctgttact
     5701 atcataagaa ccatcagcaa ttactgtgtt tactctttta ttctgcttta ttgttatatc
     5761 ctctatcagt tcagacagta cttttccatc atgtacttgt tcactggtta cttgtaatga
     5821 taaaattctc ttcttcatta tatctacagc aacatgtatc tttagatagc ctcttttgat
     5881 attccactta tgtctaatcc attcacccct gttagagatc tttataccag tagaatcaat
     5941 tgctattaca aaataatcat catgttgtaa actagatttg ttattatccg aagaaatctt
     6001 gatatccaat ctgtttattc ttctactaat gttactataa tctggaatag attgtagtgt
     6061 gtttgaagca tgttctccta attacgcctt ctgtttgcct gtagggtaag tgaaagtatg
     6121 ccctcatgta ccccaataac ttgataaatg aatctgggta tacgaacttt ctaccttcct
     6181 tattcttatt catcactttt aactcagtat cccagttatc cataacatca aaatcaagta
     6241 atatttctcc tcttctaacc agagagttat tgtaattctt ccaatttctc acataatatg
     6301 actataatag gttagctaaa tgttttagga ataaatagtt gtgcaataag acatcttcta
     6361 ctgttattac tactgttact gctattacaa ctaattacat tactaatata catttatgat
     6421 atctaagtta agtatcatat cttaggccaa ctacccatgc atctaagata ccgtcttaca
     6481 gtacataaaa gattgtattc agtttcgtag ttatagtttg cacatacatc ttttttcaga
     6541 ttcctgttta cttttgtttc tactggattt aggaatggtg cacgtgttgg tagaaatagt
     6601 acagttagcc agtctcctga ttgtttttct ataaactgtt ttgtcttgtt gctgacatga
     6661 aaagatgcat tgtctattac aaggatgaat ctcttgatac ttctctgtag tacatatctt
     6721 ttgatactgt ttagatggtt tatgaaatca ttactgtttc ttgttttgct tgttgtgaat
     6781 ttgattccat ttagtgaata gagaagtgtt ataaatacat tgactttatc attagatcct
     6841 ttatgaagta tcttttgctg ttctcctttt ttctcatgta tgtcctggtt atatatggtt
     6901 gtagatgtaa ccatgtttca ttcatcttca aatcctagta taatcttttt ttaaaagagc
     6961 agacgatatc ttcttgtacc cttctatctt tcctttcttt tcctcataat cgatgccttt
     7021 ttccagttca agttttggtt gtttttgtat ac
//
LOCUS       DATIAS010000048         2609 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1508685, whole genome shotgun sequence.
ACCESSION   DATIAS010000048 DATIAS010000000
VERSION     DATIAS010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2609
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1508685"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..934
                     /locus_tag="VLA74_00950"
     CDS             158..934
                     /locus_tag="VLA74_00950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49300.1"
                     /translation="MHKETTITLSLLLLASLIMSTSATTNTNFNLISNSMAFEESSSY
                     PYRYTQQIYSDNNDDTYKDDGRNLYYSQQSQNEQSERYQTNDNVYGYNNNYNDNANYD
                     DTYYSKEYNYGYPPEKPILNSLHAEGTFFVSDAGESHGGFEFTAEYKTEFDVTNGIGT
                     LTLTQITGLGDPLEKHVYSITDLRIEKNEKITMNIDDNYVELIFVESDEIWNHQFDNH
                     YIASWGGFAPENEIKGVISPTIFQGLPDFWYVELRIPAVY"
     gene            1802..2278
                     /locus_tag="VLA74_00955"
     CDS             1802..2278
                     /locus_tag="VLA74_00955"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49301.1"
                     /translation="MFKRWNNNNNRSMSLANSVHDYILLVDDEKDILDLFSDYLISHG
                     FNTVAFQNPIEALEYFYQNISNCSLVITDYKMPQMSGIDLIKKIRQKDDTAVFRIKTI
                     VISAYMKDNIPFDKSYAATVDKILEKPVYLDKLKKEIQELLSSSVTIHQKHESIKK"
     gene            2408..>2609
                     /locus_tag="VLA74_00960"
     CDS             2408..>2609
                     /locus_tag="VLA74_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49302.1"
                     /translation="MSVSTNNYTPHSTSRTNKAKILIIDDDEDINNLFKIFLESNGCY
                     QVDSYTNPIDALYYFKKNVYDLI"
BASE COUNT          999 a          362 c          346 g          902 t
ORIGIN      
        1 aaaactagca tgagaaaaaa attatatatg tcataatttt ttgtaaaatg attatattaa
       61 attagataca ataagcattc tatacctaat tacataatgt atattattga ataatttgtc
      121 gaattataaa taattatgaa agttattaat agtaaatatg cacaaagaga caacaatcac
      181 tcttagtctt ttactactcg cttcgttgat aatgtcaaca tcagcaacaa caaacaccaa
      241 ctttaatcta atctcaaact ctatggcatt tgaagaatca agttcttatc catatagata
      301 tactcaacaa atatactcag acaacaatga tgacacatac aaagatgatg gcagaaatct
      361 ttattattct caacaatcac aaaatgaaca atcagaaaga taccaaacaa atgataatgt
      421 atatggatac aataacaatt ataatgataa tgcaaattat gatgatactt attatagtaa
      481 agagtataat tatggttatc caccagagaa accaattcta aattctttac acgcagaagg
      541 aacatttttt gttagtgatg caggagagtc ccatggtggc tttgaattta ctgcagaata
      601 taaaactgaa tttgatgtta caaatggaat aggtactctt acccttactc aaattactgg
      661 attaggcgac ccattagaaa agcatgttta tagtattact gatttaagaa tagagaaaaa
      721 tgagaaaatt acaatgaaca tagatgacaa ctatgttgaa ttaatcttcg tagagagtga
      781 tgagatttgg aatcatcaat ttgacaatca ttatattgct tcatggggtg gtttcgctcc
      841 agaaaatgaa atcaaaggtg ttatatctcc aacaattttt caaggtttgc ctgacttttg
      901 gtatgtagaa cttcgtatac ctgctgtata ctaaataatt atttttttat tattatcaat
      961 tccaaattaa gtttctaata ataaaagcta aatacaagct agtaatatac ctataattga
     1021 ttcatatttt agcaccgcta tcgttatggc tttccttcac aagttaaatt tcaaaatctt
     1081 tgctaaatag caattgaata ttaaattata tagaatggta atgtccttga caccaataaa
     1141 gataatttct atgcgtacaa tttacacatt catatggttg tctatgatta tgatttggtt
     1201 gtaaattatc agtttctgaa caaggactta gatatgcaaa attgaaactg ctgtctggtg
     1261 gataagcttt gtatggatgt ccacaattaa aacagctaaa taccttaatc tgtggttgtt
     1321 gtagtaaatt tcttctgact tctgtatcct ctatattctg tggagcttcg ttttcgaatt
     1381 ctatatctta tttcccttct ttctaaacaa accatattta ctaaagtatt taataattag
     1441 atactatttt ttgattaaaa ctctcaacct aaaagcaaaa aatgagacac aactagggac
     1501 taaaataaaa attatttaaa ataattctaa tccataatta atagataata caatagaact
     1561 ctaaaaacct agtcttttct cctatgattc taagataaag gactttgatt tcttcatttg
     1621 ccaataattt atcagatttt tagtccaaag aggaaagtag gcaatgtata tcacaccata
     1681 gccttctaaa ataccattct gctttttttt aatggcttaa aagatgacta tggcttttac
     1741 aaattaacaa aagtagattt cgcgtatata aaaaattgaa aaaataagat aacaaatagt
     1801 attgtttaaa agatggaata acaataataa taggagcatg tcacttgcca atagtgttca
     1861 tgattatata ttattggtag atgatgaaaa agatattctt gatttattta gtgattattt
     1921 gatatctcat ggattcaaca cagttgcttt tcaaaatcct attgaagcat tagaatattt
     1981 ttatcaaaat attagcaatt gctctttagt tattacagat tataagatgc ctcaaatgtc
     2041 tggaatagat ttgataaaaa agataagaca gaaagatgat actgctgttt ttagaataaa
     2101 aactattgtt attagtgcat acatgaaaga taatattcct ttcgataaat catatgctgc
     2161 aacagttgat aaaatattag aaaagcctgt ttatcttgat aaattgaaaa aagaaattca
     2221 agaattactt tcttcttccg ttaccattca ccaaaaacat gaaagtatta aaaaataaaa
     2281 taagattatg ataatgaata gaactataat actatatgtc actctcgtat tttcagatta
     2341 taaatgatat taaatttatt tctaatctta atatactata tcgattagtc aactattgtt
     2401 aggccctatg tctgtgtcta ctaataacta tactccacat tcaacttcac gtactaataa
     2461 agcaaaaata ttgataatag atgatgatga agatatcaac aatctattta aaatattctt
     2521 agaaagtaat ggttgttatc aagttgattc ttatacaaat ccaatagatg cactctacta
     2581 tttcaagaaa aatgtatacg atttgatat
//
LOCUS       DATIAS010000049         2024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1508728, whole genome shotgun sequence.
ACCESSION   DATIAS010000049 DATIAS010000000
VERSION     DATIAS010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1508728"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..724
                     /locus_tag="VLA74_00965"
     CDS             326..724
                     /locus_tag="VLA74_00965"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49303.1"
                     /translation="MVRNLLVAIIDDESDIVNLFRDALSKIDGLSIFTFTDPMAALEH
                     FKINKGAYALLISDLRMPGISGTDLVCKIKKENPLVRTLLMTAFEVDDKVFEEYVNND
                     IIDGFIQKPVKLRDLVSEVLKQVNIYKRIK"
     gene            872..1234
                     /locus_tag="VLA74_00970"
     CDS             872..1234
                     /locus_tag="VLA74_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF49304.1"
                     /translation="MIINNNELKQNILTALADKEMLKILNLSMYNSKSVNDIIRESDI
                     SYTTVYRKIKWLLDKELLVVDKMNLSPEGKKFTTFRSVLRSIVIRYKQNEIIVEAEKN
                     VDLIGKIGGHFFSIHNTI"
     gene            complement(1239..1556)
                     /locus_tag="VLA74_00975"
     CDS             complement(1239..1556)
                     /locus_tag="VLA74_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49305.1"
                     /translation="MSETALLFLEKGTIFLLVISLAVFSWSALRSRSLRKFQFQMSIF
                     VLIWIVGEIIRFLQEEKIFTIFGVGDLGAVLHTVAMIFFSLMLWIRFYYSRRSGKLMI
                     EMK"
     gene            complement(1549..1833)
                     /locus_tag="VLA74_00980"
     CDS             complement(1549..1833)
                     /locus_tag="VLA74_00980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49306.1"
                     /translation="MIDESYLHLISGLAFFAGSIVLAYFSIKSRGIIRQLAIIFLVFT
                     LVHSLYHVTSYFGQELISEGLLEPLSVIILIFFGFSYLIIKSKQEVKSLE"
     gene            complement(1839..>2024)
                     /locus_tag="VLA74_00985"
     CDS             complement(1839..>2024)
                     /locus_tag="VLA74_00985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49307.1"
                     /translation="FLSIRYFMFQYRGNDIYNSKTGLRESDSYLFCLKERYLVRVMKK
                     SIFIIKEDMIIKDFLPT"
BASE COUNT          726 a          321 c          331 g          646 t
ORIGIN      
        1 gggcaaaaac gtatgtttta gattctgcat tcaactattt tgtcaaggta aataacaata
       61 tacttccaaa atggttcctg tctgcaatac gaaactagcc caagattgtc gaatttggct
      121 acgtagatgt caattagctt cgactaacaa tacttgtact ccataagaga ctgattttat
      181 tggtttttta gtactcttct gttccttata taagattgca tatgaatctc aaatttggat
      241 tttattattt attaagatgt gatactatac tatagataat caatttcagg tatcagaagg
      301 attgacagag ggttgttagt ttttagtggt taggaatttg ctagtagcca ttatagacga
      361 tgaatcggat attgttaact tgttccgcga tgctctgagc aagatagatg gcttgtcaat
      421 attcacgttt acggatccca tggcagccct tgaacatttt aagattaaca aaggtgctta
      481 tgcactccta atctcagatt taagaatgcc tgggatcagt ggcacagatt tagtttgcaa
      541 aataaaaaag gagaatcctt tagtaagaac gttacttatg accgcatttg aagtagatga
      601 taaagtattc gaggaatatg taaataatga tataatagat ggttttattc aaaaacctgt
      661 aaagttgaga gatctggttt cagaagtcct taaacaagtg aatatttaca agagaataaa
      721 ataaatctca atatctatcg gttaccggaa tacatgtatc gacaagtata tttgtttaat
      781 ttaacttgca aattccttat caaaactctc ttgcggatag ttccttgaag aaaaatctaa
      841 taaacgatca atttgtcaat aaggtaaatt gatgataatt aacaataatg agcttaagca
      901 aaatattctt actgcattag cagataagga gatgttaaaa atattgaatc tttcaatgta
      961 caattccaaa tctgtcaatg acattatcag ggaaagtgac attagctata ccactgtcta
     1021 cagaaaaatc aaatggttgt tggataaaga attacttgta gtagataaga tgaatttatc
     1081 gccagagggg aaaaaattta ctacatttcg cagtgttctc agaagcattg ttatcagata
     1141 caaacaaaac gaaattattg tagaagctga aaaaaatgtt gatttgattg gaaaaatagg
     1201 gggacatttt ttttcaatac ataatacaat ctagatgatt atttcatttc aatcatcagt
     1261 ttcccgctcc ttcttgaata gtaaaatctg atccagagca taagggaaaa gaaaatcata
     1321 gctacggtat gcagaacagc tcctaaatca cccacaccaa atattgtaaa aattttttct
     1381 tcctgcaaaa atcttattat ctctcctact atccatatga gaacgaatat agacatctgg
     1441 aattgaaatt ttcgcaaact tctcgatctt agagcggacc aactaaatac agctagtgat
     1501 attaccagta gaaatattgt acccttttcc aaaaatagta aagctgtttc actcaagaga
     1561 ctttacctct tgctttgact taataatcaa atagctaaac ccaaagaaaa ttaaaattat
     1621 gactgacaat ggttccaaaa gaccttctga aattaattcc tgaccaaagt acgaagtcac
     1681 gtggtaaagt gaatgaacta gcgtaaatac aagaaagatt attgccaact gtcgaataat
     1741 tcctcgcgat ttaatactaa aatatgctaa aactattgaa cctgcaaaaa aggcaagtcc
     1801 gctgataaga tgtaggtatg actcgtctat caattttgtt atgtaggtaa aaaatccttt
     1861 ataatcatat cttctttaat gataaaaatt gatttcttca tcactctaac tagatatctt
     1921 tctttcaggc agaataaata tgaatcagac tctcttaatc ctgtcttact attataaata
     1981 tcgtttcctc gatactgaaa catgaaatag cggatcgaaa ggaa
//
LOCUS       DATIAS010000050         2098 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1508942, whole genome shotgun sequence.
ACCESSION   DATIAS010000050 DATIAS010000000
VERSION     DATIAS010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1508942"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..368)
                     /locus_tag="VLA74_00990"
     CDS             complement(150..368)
                     /locus_tag="VLA74_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49308.1"
                     /translation="MDVTKICQKQNIHYCSYVLFVFVFSWLEFKNTSNALEPFKDQQR
                     SHMLQYGIGYKGLVHVIFTIKGKEYQLL"
     gene            563..1753
                     /locus_tag="VLA74_00995"
     CDS             563..1753
                     /locus_tag="VLA74_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSF49309.1"
                     /translation="MNIKDTSSSTIIFTIAIGIIILLFAGIITFQNTEAIQEEETSYK
                     NSNNNPLSALFKQVQQSVVQISSSEENIDNNQLGFRLGSGFIYDKNGHIITDYHVVNE
                     GNKFLVTFPDGSIYNGEIVGLDPYSDLAVIKVNAVPQEKLKPLVFGNSLNLVIGQHVA
                     AVGNPFGLLGSMTEGIVSGLGRLLPSIIVEPLFGSEIVVVSFSIPDTIQTDAAINPGN
                     SGGPLLNMKGEVIGINSAIFSNTGVYSGVGFAIPSNTAKKVVPALIEKGSYDHPWLGI
                     IGIDITPTIAEVMNLTEAKGFLVTDVRANSPANKAGIKGGDIIVTINNNSRKIELGGD
                     IIIGIDGKPVRKIDDILTHIAREKLVGDQVTFTLIRNGETLEEKNLTLEKRPDSENIF
                     KIGK"
     gene            complement(1823..>2098)
                     /locus_tag="VLA74_01000"
     CDS             complement(1823..>2098)
                     /locus_tag="VLA74_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49310.1"
                     /translation="KEPFKRVQILKDIAQVQPYLSSYCEATKYVIDKDKCKKRLSGKI
                     VDITQIQETNDIDESRMEERKEDRMREAEEVFKKQMEKAVFFNKQYD"
BASE COUNT          732 a          312 c          325 g          729 t
ORIGIN      
        1 tttatcaact aaggatctaa tgaaattctc tgctacaaac atatttctct cttttgaaat
       61 attaatacca agcacagatt tatgaatcgg ttcaattgca atccataacc aataatgatg
      121 gtccccaatc tgaatgatag tttcatcaat tataaaagct gatactcttt tccttttatt
      181 gtaaatatga catgaaccaa acctttgtat ccaatcccat attgcaacat gtgacttctt
      241 tgttgatcct taaaaggttc caatgcatta gatgtattct taaactcaag ccaagaaaat
      301 acaaatacaa agagtacata actacaataa tggatgttct gtttctgaca aatcttagta
      361 acatccaagc cagaatagga tattcacagt taaattcatt ctgttaaatt aacagcgctg
      421 ttagtttgtt taaataattg ataaagtgat gattaatcat aataattttt ttttatttat
      481 ataacaaata aaaatattat tttaagcata tgttttagtg acacaattat attatcggct
      541 atgctatcta accataattc atttgaacat taaagacact tcatcatcta ctataatatt
      601 tacaattgct ataggaataa taatattatt atttgctggc attattacat tccaaaatac
      661 tgaggcaata caagaagaag aaactagcta taaaaatagt aataataatc ctctttctgc
      721 attatttaag caagttcagc aatcagtagt tcagatttct agtagtgagg aaaacattga
      781 taataaccaa ttaggattta gactcggatc aggatttatt tatgataaaa atggtcatat
      841 aattacagat tatcatgtag ttaatgaagg aaataaattt cttgttactt ttcctgatgg
      901 atcaatatat aatggagaaa tagtcggttt agatccttat agcgatcttg ctgttataaa
      961 ggtcaatgca gttcctcagg aaaaattaaa acccttagtc tttggtaatt cattaaattt
     1021 ggtcataggg caacatgtag cagcagtagg aaatccattt ggattattag gctcaatgac
     1081 agaaggaatt gttagtggtt taggtagatt attgccttct ataatagtag aaccattgtt
     1141 tggaagcgaa attgtagtag tttctttttc tatacctgac actattcaaa ctgatgctgc
     1201 aattaatcct ggcaattctg gtggtccatt attaaatatg aaaggagagg tcataggaat
     1261 aaattcagct atattttcca atactggtgt ctattctggc gtaggatttg ctattccttc
     1321 caatacagct aaaaaagttg ttcctgcatt aattgaaaag ggttcttatg accatccatg
     1381 gcttggcata ataggtattg atattactcc tactatagca gaggtaatga acctgactga
     1441 agctaaagga tttttagtaa cagatgttag agcaaatagt cctgctaata aagcaggaat
     1501 caaaggtgga gatataatag taacgataaa caacaacagt agaaaaatag aattaggagg
     1561 tgatattatt attggaattg atggaaaacc tgttagaaag attgatgata ttcttacaca
     1621 tatagcacgt gaaaaacttg taggagatca agttaccttt acattgattc gaaatggaga
     1681 aacattagaa gaaaagaatc taactttgga aaaaagacct gattcagaga acatatttaa
     1741 aataggtaaa taaagtcctt aatcaaattt actaaaccac aaacctatag aggagaaatt
     1801 tatcagcatg attatatgta tatcaatcat attgcttatt aaagaaaaca gccttttcca
     1861 tttgtttttt gaatacctct tctgcttctc tcatccgatc ttcttttctt tcctccattc
     1921 ttgattcatc aatatcattt gtttcttgta tttgtgtaat gtctactatt tttcctgaaa
     1981 gtcttttttt acatttatct ttatcaatga catattttgt ggcttcacaa tatgaagata
     2041 gatagggttg aacttgagct atatccttta gtatctgaac tctcttgaat ggctcttt
//
LOCUS       DATIAS010000051         2627 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_828506, whole genome shotgun sequence.
ACCESSION   DATIAS010000051 DATIAS010000000
VERSION     DATIAS010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_828506"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(204..1658)
                     /locus_tag="VLA74_01005"
     CDS             complement(204..1658)
                     /locus_tag="VLA74_01005"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF49311.1"
                     /translation="MIDTNTKRYYILSVLLFLSIALLVFFSYSNIHAQQQQQQQQQNQ
                     PQGIDGITLSDPNLKLELVTSGLDFPTTMAFLGPDDFLILEKSGTVKRVTNGHVLDKP
                     LLQVDVSVKDERGLLGIAVSEKKKNDSNGTSISNKDISHNVFLYYVICSEKNEDCKNQ
                     IYRYDLDNKNNVLINPKLLLSVPSFPDPAHIGGIIDIGPDNNLYVTVGNFENTIPDEP
                     YKTKTQNFEEGEPVDGRAGILRITQDGKPVGTEGILGNEYPLNLYYAYGVKNSFGIDF
                     DPVTDKLWLTENGPKYGDEINLVEPGFNSGSDKIFGIWKVNEEGKKLKTAGDKEVGEE
                     GEQEQEGEGGTGYVTVVGDNPEGLVYFDGKGHYSPPEFTWDKSVAPTALLFLDSDGLG
                     SAYKNNMFVGSVDSGRIFHFDLNENRSGLDLKGVLEDKIATDSTEYGDILFAEGFSII
                     TDIKQGPDGYLYIVSGLKQSKTEKPGAVYRILPS"
     gene            complement(1846..2004)
                     /locus_tag="VLA74_01010"
     CDS             complement(1846..2004)
                     /locus_tag="VLA74_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49312.1"
                     /translation="MLNKNINTNSMANKSENITSEMDTNVLSAIAPKLANTTKIINTK
                     AWDNLFVQ"
BASE COUNT          836 a          443 c          314 g         1034 t
ORIGIN      
        1 ttccaatgaa agaataatag caacataata ataatccaat cgtaataata tagatgagtt
       61 aatctttata tatattaaaa ttttctattg aatatttatt taatatttta aaatatataa
      121 tagaaagaaa caagttttta attattttac actatctatc tttttgtttt tttattattt
      181 tttcttctct ttatgccgtt gtgttaagaa ggtaatattc tataaactgc tccaggtttt
      241 tctgtttttg actgctttag tcctgaaaca atgtagagat agccatctgg accttgtttt
      301 atatctgtga taatactaaa accttctgca aataatatat caccatattc tgtactatct
      361 gtagctattt tgtcttctaa aacacctttt aaatccaatc cagatctatt ttcgtttaga
      421 tcgaaatgaa atattcttcc gctatctaca gatcccacaa acatattatt tttatatgca
      481 gagcccaatc cgtctgaatc aagaaataat aatgcagttg gagctactga tttatcccat
      541 gtaaattctg gagggctata gtgtcccttt ccatcaaaat aaactagacc ttctggattg
      601 tctcctacta ctgttacata tccagttcct ccttctcctt cttgttcttg ttctccttct
      661 tctcctactt ccttgtcacc tgctgtcttt aactttttac cttcttcgtt aactttccaa
      721 attccaaata ttttatcaga accactattg aatccaggct ccaccaagtt aatttcatca
      781 ccatatttag gtccattttc tgtaagccat aatttgtctg ttacaggatc aaaatcaata
      841 ccaaaactat tttttactcc ataggcataa tataggttaa gaggatattc attaccaagt
      901 attccttctg taccaacagg tttaccatct tgagttattc gtaaaattcc agctcttcca
      961 tccactggtt caccttcctc aaaattctgt gtcttggttt tatatggttc gtctggaata
     1021 gtattttcaa aatttcctac tgtaacatag agattgttgt ctggaccaat atctattatt
     1081 ccaccaatat gagcagggtc tggaaacgag ggaacactca acaataattt gggatttatg
     1141 agaacattat ttttgttgtc taaatcatat ctataaattt gatttttaca atcctcattt
     1201 ttctcactac atataacata gtaaagaaaa acattgtgag atatgtcttt atttgaaata
     1261 gatgtaccgt tagaatcatt cttctttttc tcactaacag caattcctag caaaccacgt
     1321 tcatctttta cacttacatc tacttgtaaa agtggtttat ctaatacgtg accattagta
     1381 actcttttta ctgtacctga tttctctaga attaaaaagt catctggacc taaaaatgcc
     1441 atggtagtag gaaaatcaag tccagatgtt accaattcta attttaggtt tggatcagag
     1501 agagtgattc catcaatacc ttggggttga ttttgttgtt gttgttgttg ttgttgttgt
     1561 gcatgaatat ttgaataact aaaaaaaact agaagcgcta tagataaaaa taataaaact
     1621 gataaaatat aatatctttt tgtatttgta tcaatcattt tatttaatca aaagtatgat
     1681 acttgactat ttataaatta gatctgataa attgaaatat tcattcatca taaattttct
     1741 aataccgagt ctattggcta atactattat aaaataaata tggtatctat attatttcac
     1801 aagaacgttt tcttcacttt ttttgcctac ctattcttct actttctatt gcacaaagag
     1861 attatcccat gcttttgtat ttattatttt agttgtattt gctaactttg gtgctattgc
     1921 tgaaagtaca tttgtgtcca tttcacttgt tatgttttct gacttatttg ccattgaatt
     1981 agtattaata ttcttattta acatataccg ctttttccct tctcttgtgt atgtagaatt
     2041 atgctatcat attttgtatt gctgcttttg tacataaata ttataacaac taaaaaacac
     2101 aagtggtaaa tataaaatta ccattaatat atttccttta tttatattca ttattctgtg
     2161 aattgagaat ggaatcgaga atattttaac gcacaaataa aacattctat aattttaata
     2221 caaaaaacaa ttcttataat atatttcttt ttttttattt ttgattgcta tgaagttttt
     2281 attaccaata tcatagaata gaaaaaacgt tagaaagatt tacttacttc ataattgctt
     2341 aatctcaata ttaaaaaacc ataatatcaa tttgtaccta gtagtatcaa tttattattg
     2401 ctttcagtta attgaacctt gatgttaaaa aactcatact aattcatttg aaacaatatt
     2461 tttctattag taatatcgct aacttccttg atcacaattc taatcagctc taaaatgtga
     2521 ttttccacta tctgtaacat agatatagcc tttagagtcc attgctatat catgaggaat
     2581 taggaattga tcatctttac aaccaagtga cccccacatc gtcacaa
//
LOCUS       DATIAS010000052         2553 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_828735, whole genome shotgun sequence.
ACCESSION   DATIAS010000052 DATIAS010000000
VERSION     DATIAS010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_828735"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            537..1955
                     /locus_tag="VLA74_01015"
     CDS             537..1955
                     /locus_tag="VLA74_01015"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF49313.1"
                     /translation="MGNFLYIYLAIFVFASTGVLLGFCMPIAEYTNQSFFVGIAEAAK
                     AESNSEGPTFKDPNLIAEVVYEGLKEPTAMDFLGPDDILVLEKDSGTVQRIVDGKILP
                     EPLLSLDITSSDERGMLGIAIAKDDSITTTFIEPESINTNQNVFLFFSESQLGEFPIG
                     NRVYKYELVNDNTKLANPTLLIDLPAFPDDSHVGGVLKVGPDNNLYFVVGDQRASLFT
                     RTDSPESQTKAQNYLNGKEPDGRSGILRITQDGETVRGVGILGDQHPLDKYYAYGIKN
                     SFGFDFDPITGELWDTENGPRFGDEINLVEEGFNGGWANMQGIWRLDDSWEKGEVVTP
                     PINPEDYDLVDFDGKGKYSSPEFTFDVAPTALKFLNSDKLGEEYENDMFVGDIKNGNL
                     YHFELDEQRQGLLLDGPLADKVAEDEEIEQVVFGNGFGGITDIDVGPDGYLYVLAFDG
                     TIYRIASTMANEKENTSFQEQQ"
     gene            1985..>2553
                     /locus_tag="VLA74_01020"
     CDS             1985..>2553
                     /locus_tag="VLA74_01020"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49314.1"
                     /translation="MTRSEMLFSIYNIIIFLTIIITIPSISIDHTDGFTIKNYFEVHA
                     SPFALDDFTSASSIPEDFNFGAAGDWGCTSDTIKTLENILDKSPELMLGLGDYSYEDS
                     AQCWFDLIDPIADRTMIAIGNHDVESPEKLDAYMNYFGLKGQYYSFDYENIHFTTISI
                     ELPFEEGSSQYSFVNNDLEKASMDPNIDW"
BASE COUNT          887 a          340 c          446 g          880 t
ORIGIN      
        1 atatacatat aaagtattat ttttaatttg taattcctat ttatttatta aaagataaaa
       61 attattataa ttattcttaa tcatagttaa atatttttcc tactgaaaga aactatattt
      121 ggattttttg tgaagtagga aagataaact tgatttatga ttcatattga aaaaatatct
      181 taatttttat ttttctaata tttctatttt gtatacttac tcattatgaa tgaatattgc
      241 cttaggaata tatataaaag ttactctata ttttaaactt aaataaaaaa ttttttgata
      301 tagtctacaa aattgatatt tatattttat gatgtttata aaaatagtaa cataatattt
      361 tgaatttggg tgaaaatact tattttttgt atatttatta aaatagaaca aatttttatt
      421 atttattact ataatacata tcaataatag tattgatatt atagaaaatt agtaaatgaa
      481 aacatatttg tatattctat ggaaactgat aaaaatattt taaattattt taatatatgg
      541 gtaattttct atatatttat ttagccattt ttgtctttgc atcaactggt gttttactgg
      601 gattttgtat gccaattgca gaatatacaa atcagtcttt ttttgtaggt attgctgagg
      661 ctgcaaaggc agaatcaaat tccgaaggcc caacctttaa agatcctaat ctaattgctg
      721 aagtggtata tgagggatta aaggaaccga cagcgatgga ttttttagga ccagatgata
      781 tattggtatt ggagaaagac tcaggtactg tacaaagaat tgttgatggc aaaattctac
      841 cagaaccatt actttctctt gatataacat cttcagatga aagaggaatg cttggtattg
      901 ctattgccaa ggatgattct attactacta cttttattga acctgaatcg ataaatacaa
      961 atcagaatgt tttcttattt ttttcagaat ctcaattagg tgaattcccc atagggaatc
     1021 gtgtttacaa atatgaatta gtaaatgata atactaaact agcaaatcct acattgctta
     1081 ttgacttacc agcttttcct gatgattccc atgttggtgg agtgctcaaa gttggacctg
     1141 ataataatct ttatttcgtt gttggggacc aaagagcatc cctctttact agaacagatt
     1201 ccccagagtc gcagaccaaa gctcaaaatt atttaaatgg aaaagaacct gatggaagat
     1261 ctggtatctt gagaattaca caagatggtg aaacagtaag aggtgtagga atattaggag
     1321 accaacatcc tcttgataaa tattatgcat atggaataaa aaatagcttt ggatttgatt
     1381 ttgatccgat tacaggtgaa ttatgggata cagaaaatgg tcctagattt ggtgacgaaa
     1441 ttaatctagt tgaagaaggg tttaatggcg gatgggcaaa tatgcaagga atatggagat
     1501 tagatgatag ttgggaaaaa ggagaagtcg taacccctcc aataaatcct gaggattatg
     1561 acttggtaga ttttgatgga aagggaaaat atagctcacc tgaatttaca tttgatgttg
     1621 cacctactgc tctcaagttc cttaattcag ataaattagg tgaagagtat gaaaatgata
     1681 tgtttgtagg agatatcaag aatggcaatc tttaccactt tgaattagat gaacaaagac
     1741 aaggattgct gcttgatgga ccacttgcag ataaagttgc tgaggatgaa gaaattgaac
     1801 aagttgtctt tggcaacgga tttggtggta ttactgatat agatgttgga cctgatggtt
     1861 atctctatgt tcttgcattt gatggaacaa tttatagaat agcgtcaact atggccaatg
     1921 aaaaagaaaa cacatcattt caagaacaac agtaatttct aatacagatg ataaattgat
     1981 gactttgaca agatctgaaa tgctattttc aatatataat atcattatct ttctaaccat
     2041 tatcataaca attccatcaa tcagcataga ccataccgac ggatttacta ttaaaaatta
     2101 ttttgaagta catgcttctc cttttgcgtt agacgacttt acctctgcta gtagcatacc
     2161 ggaagacttc aattttggag ctgcaggcga ttgggggtgt acatctgaca caataaaaac
     2221 attagaaaat attctagaca aatctccaga actcatgtta ggacttggtg attattcata
     2281 cgaagatagt gctcaatgtt ggttcgatct gatagatcct attgcagaca gaacgatgat
     2341 cgcaattgga aatcatgatg ttgagtcgcc tgaaaaactt gatgcgtata tgaattattt
     2401 tgggttaaaa ggacaatact attcatttga ctatgaaaac attcatttta ctacaatctc
     2461 aatagaactt ccatttgaag aagggtcatc ccagtatagc tttgtaaaca atgatcttga
     2521 aaaggcttct atggatccta acatagattg gat
//
LOCUS       DATIAS010000053         3514 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_420148, whole genome shotgun sequence.
ACCESSION   DATIAS010000053 DATIAS010000000
VERSION     DATIAS010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3514
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420148"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..254)
                     /locus_tag="VLA74_01025"
     CDS             complement(30..254)
                     /locus_tag="VLA74_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49315.1"
                     /translation="MKKTVITILSFVITTIVSALVAPIFFELDKTLGEGENFDDDNYK
                     TMVYNTQQVAETQCKSLCPSTAEMCIQMCA"
     gene            complement(799..1101)
                     /locus_tag="VLA74_01030"
     CDS             complement(799..1101)
                     /locus_tag="VLA74_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49316.1"
                     /translation="MKEREREIRIKSFQTQSFDGLINQVNSWLRDKQEKNRNTFEFID
                     MKYQCESSTVSDSDLQYTAIAIYKDSLENLNKELSEEENSINEEFIDEKKKLEYRK"
     gene            complement(1144..3048)
                     /locus_tag="VLA74_01035"
     CDS             complement(1144..3048)
                     /locus_tag="VLA74_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSF49317.1"
                     /translation="MSEKYQELKTSDILAEALIDWNVDIVFGLPGDGINGFIEALRVR
                     QDKIKFVLVRHEESAALMSCAYAKYTGKIGVCVATSGPGAIHLLNGLYDAKADNIPVV
                     AITGSTFSDIMNSGFLQDVNLLQLFSDVASYNTMINVPEQAEMAVDLACRTALSHKGV
                     SHINIPVDVQEKKLKGNYSRHKVPGHTSDIFDSFALPNKRLIEKAAQILNRGNKIVIL
                     VGQGALNASKEILAVAEKLNAPIIKALLGKAVVPDDHPLSLGGIGMLGTDPSSDAMKE
                     TDTLLMIGTSFPYMEYLPKPGQATGIQIDIKPEKIGLRYPIEIGLVGDSKTVLSELLP
                     LLNNRIDTNNDVIKNVYKDNKKDISNISLQFLQSMQKSMAKWNKIMKEQSYRYDNPIK
                     PQVIANAVSEELKDNAIVSVDSGNNTVWAARFLKMRDGMKFSVSGTLATMACGLSYAI
                     AAKIAFPDRQSIAFVGDGGFTMLMGEFATAVQYKLPIKIIILKNNLLGMIRWEQIAFL
                     GNPEYAVEFTPIDYAKFAEACGGKGYTIKKIEEVKSIIKMAMREEDELPTIVEAYVDP
                     YELPLPPKVNMEFPSKIAESFERGQPYIKEIKKTLSMDHIPERYYSLKRHLKTKQGKE
                     KKYHNNVINS"
BASE COUNT         1100 a          581 c          463 g         1370 t
ORIGIN      
        1 aataaaaaga aataaaaaat gagaagtttt taagcacaca tttggataca catttctgca
       61 gtagacgggc aaagagattt acattgagtt tctgctactt gttgagtatt atagaccatt
      121 gtcttataat tatcatcatc aaagttttct ccctctccaa gagtcttatc aagttcaaaa
      181 aatatgggag ctactagtgc agacactata gtagttatca caaaggatag aattgtaata
      241 actgtttttt tcatcacttt tttctgtacc ctatataata cttcatattt gaataaaaat
      301 attttaatac aatattagac aataatttct gtaaatattt tcgctataaa aaaatgaatt
      361 ttttcttatt ctatcattat tttattacta acaaccaggg aaagctaaaa agccatttgc
      421 tcataaaatt tccttttgat ttttagtaga ctgtggttta ttctctcttt taacataaat
      481 tatctctaat ttttaaataa ttaaaaaata aaccataata caagccataa tctgcctctt
      541 ggctacttta taaataagta gactatggct ttaacatata gttgatttat agcaaattac
      601 taaatagcat attaaaaata taaaatacaa gtacaggcaa taatcaccta tagccatagt
      661 ttgctactat ctatgtaaat tataggcttc tacttttcag tagactatgg cttcttcttc
      721 tacctcttca atatttattt gcctattgac gctagtttaa tcaaatacta attcataatt
      781 gtgatatttt atttcttttt atttccgata ttccagcttt ttcttttcat ctataaattc
      841 ttcatttatt gaattctctt cttcagataa ttctttgttt aaattttcta aagaatcttt
      901 ataaattgct atagcagtat attgtaaatc actatcggag actgtagaag attcacattg
      961 atatttcata tcaataaatt cgaatgtatt tctgttcttc tcttgtttgt ctcttaacca
     1021 actatttact tggttaatta gaccatcaaa tgattgtgtt tgaaaagatt ttattctgat
     1081 ttctctttct ctctctttca cttctagata ttgcaccttc attattaaaa tattgatagt
     1141 tgtttatgag tttattacat tattatgata ttttttttct ttaccttgct ttgtttttaa
     1201 atgtctcttt aaactataat atctttcagg gatatgatcc atcgataaag tcttttttat
     1261 ttcctttatg tatggttgcc ctcgttcaaa tgattctgca attttacttg gaaattccat
     1321 atttactttt ggtggtaatg gtagttcata aggatctaca tatgcttcta caatagtagg
     1381 taattcatct tcttctctca ttgccatctt aattatagat tttacttctt ctatcttttt
     1441 tattgtatat cctttgccac cacatgcttc agcaaatttt gcataatcta taggtgtaaa
     1501 ttctactgca tattctggat ttcctagaaa tgctatttgt tcccatctaa tcattcctaa
     1561 tagattattc tttaaaatta taattttaat tggtagctta tattgaactg cagtagcaaa
     1621 ttcacccatt aacattgtaa atccaccatc tccaacaaat gctatggatt gtctatcagg
     1681 aaaagcgatc tttgcagcta ttgcatatga taatccgcat gccattgttg ccaaggtccc
     1741 cgatactgaa aatttcatac catctctcat tttcaaaaaa cgtgcagccc aaacagtatt
     1801 atttccgcta tctacagata caattgcatt atcttttaat tcttctgaaa ctgcattcgc
     1861 aataacctgt ggtttaattg gattatcata tctgtagctc tgttctttca ttattttatt
     1921 ccattttgcc atagattttt gcattgattg taaaaattgc aaacttatgt tagaaatgtc
     1981 ttttttattg tctttgtaaa catttttaat aacatcatta tttgtatcta ttctattatt
     2041 caataaggga agcaattctg ataaaactgt ttttgaatct ccaaccagac ctatttcaat
     2101 aggatatctt aatcctattt tttctggctt gatatcaatt tgaatccctg ttgcttgtcc
     2161 tggttttggg agatattcca tatatggaaa tgatgttcca atcattagta aagtatcagt
     2221 ttccttcatt gcgtcacttg atgggtctgt accaagcata cctattccac ctaagctcaa
     2281 tggatgatca tcagggacaa cagcttttcc aagtaatgct ttgattattg gtgcatttag
     2341 tttttctgct actgctaaga tttcttttga agcattcaat gctccttgtc ccactaaaat
     2401 tacaattttg tttcctctat tgagtatttg tgctgctttt tctattagtc gtttattggg
     2461 taatgcaaaa gaatcaaaaa tatctgacgt atgtccaggt accttatgcc ttgaataatt
     2521 cccctttaat tttttttcct gtacatctac tggtatgtta atatgactaa ctcctttgtg
     2581 agaaagagca gttctgcatg caagatctac tgccatctct gcttgttctg ggacatttat
     2641 catcgtattg taagaggcaa catcagagaa aagttgcaaa aggtttacat cttgtaaaaa
     2701 acctgaattc attatatctg aaaaagtact tcctgtgata gcaaccactg gtatattgtc
     2761 tgcctttgca tcatataatc catttaagag atgaattgct ccaggtccag atgtggcaac
     2821 acatacccct atcttgcccg tgtatttagc atatgcacaa gacataagag cagcagattc
     2881 ttcatgtcta acaagtacaa attttatttt atcctgtctt actctcaagg cttcaataaa
     2941 tccattaatt ccatctcctg gaagaccaaa aactatatct acattccaat ctattaaggc
     3001 ttcagctaaa atatcggatg ttttaagctc ttgatacttc tcgctcataa ttaataataa
     3061 gtattaaacc ttaaatatac aactgaaaat acaataatac aaatatttta ttattaaaag
     3121 aagaaagtcg taacctctat atctataata gcaaatttga gctagcaaga ttattgtttt
     3181 actcttatag cttctttgac attcgggttc atttacaaaa gcagtaagct ggtcgggagt
     3241 tgaatccttc atgtagtagg gttctactac atcgaatata gcttttatta ttagtaattt
     3301 attttgatat aaattagtat tatgcaaaaa gtatagaaat tcgaaaatat gccaaggagg
     3361 gaataatagt gatatcagta caaaaataag agtctaagat atggtaataa agaggatata
     3421 atcaagaatt atttaatgtt tattttttat ttctaatata ttctagttaa taaaatttag
     3481 atttgtcatg aatgagaatt tagttattgt aaaa
//
LOCUS       DATIAS010000054         6289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1509523, whole genome shotgun sequence.
ACCESSION   DATIAS010000054 DATIAS010000000
VERSION     DATIAS010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6289
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1509523"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VLA74_01040"
     CDS             <1..655
                     /locus_tag="VLA74_01040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49318.1"
                     /translation="NRLQRSKPQNNYYYMTTLFAKTLDRIGMGSREDGSNEIRRRKIT
                     LHSFRRFVKTTISDLGYADYSEWFIGHSGSTYWRKKDEEKAEIFKKIEPYLTFLNVPQ
                     LERQGADLQTKIEELQDINQLLRYKQNEKEEQIKKLEESVAFLSDRFNAFLLSQPGNR
                     IVYYDDDNNKNNNANPRDLKGIELKPEINSNKAVGEIAISYSNSSSTNSNNKKKQLY"
     gene            701..979
                     /locus_tag="VLA74_01045"
     CDS             701..979
                     /locus_tag="VLA74_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49319.1"
                     /translation="MRNGILSAEDSKEKPVVITCLRCVLVNQHENKYCPKYSYPLTPQ
                     AYDEVKISDNIKYHELEKRYERDLNALREDMENKFQVLLSKIELSKLV"
     gene            complement(966..1985)
                     /locus_tag="VLA74_01050"
     CDS             complement(966..1985)
                     /locus_tag="VLA74_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49320.1"
                     /translation="MLTTGMIELPVERCIDILKVFYAKQNEELWSNKIVKELEKTTGS
                     KDKPAILKTIRLLQDIEFIEIDRSITKYKQKEIMILTPLGNEIINFIDAFERCYNSYT
                     KLRETIIEHNFEVGENSDAEIQYNIVKNKLRKKGWNPVEIESFESIMRSAFKLETYYR
                     KNILTVILNRYSEIIDEYDVNEIANKIILKIIMSKIEKIFLLVGELQEVNDKYIFNPN
                     YYFNAENEVEEKLPFVDISLLLLEDIRELYYDDFNLINESVANNIDEVTLSLFLFAQP
                     PTEDIQSEVTEMDEITENQTQDSILSKLKKENNNLIDKSHLIDDLGVVKLMDIYKKYL
                     KLKQV"
     gene            2021..2287
                     /locus_tag="VLA74_01055"
     CDS             2021..2287
                     /locus_tag="VLA74_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49321.1"
                     /translation="MMIEKDVYVVQPYKVGTKTKASLAMIIPAQIVKNQKLDPSTIFV
                     IRAEESEKKIILERIDIPSERGRVVSVGETSEASSQQIPTTYVP"
     gene            2302..2529
                     /locus_tag="VLA74_01060"
     CDS             2302..2529
                     /locus_tag="VLA74_01060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49322.1"
                     /translation="MSCDSYNTIPTFKECAGKNCPNDATVKLKIKFIKKIGYFCESCT
                     SELKTLDLTEQEEIDVDQRVGPSLNINMEDE"
     gene            2522..4825
                     /locus_tag="VLA74_01065"
     CDS             2522..4825
                     /locus_tag="VLA74_01065"
                     /inference="COORDINATES: protein motif:HMM:TIGR01613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid primase, P4 family"
                     /protein_id="HSF49323.1"
                     /translation="MNSSNTNIFNEVANFLFHRIGANPLPADTKNKRINIPWGEFQNK
                     SIPEQVHESSKEKGEYDNGIAVMTGRIHKGKNEGKYLTGIDCDNKKAIDEICNSLGFK
                     NIDELANWTWVEQHKDNPDKAHIYILSTKSLKNKGKDPKKVEIESLNEIPAIEVKCER
                     QNMFTAPSIHEDGYPYEILGTREPVLCNDEFENHLDNIFRKYGIEYLHNSSEQNNNNS
                     TLPDPLRQLTLLLEIPPDFKFRIHQGSRHNTMVSFANKLLFKYKFDNNNNGNKLKDFF
                     NEVNDKLCIPPLPKDEINSIWRDALKFSDNKFAEMQIVNEDEDDIQNYKSPIVVQLDK
                     SDKLLHKEIVQNFVYDIQTNSIDCTLNSKYDLTKIIVPINIKQWPDVRKTFRKLCEEK
                     GIKEDDICLLLESIDNNADLIKKYYLENNRKHNATVAATEERKKQRLQLIQEGTDFVM
                     AKYRFSTVEESNEILFYDSNKGVYTSGGHIIIDKEIDKKYGYKLKTADITEIRNYVRR
                     KTYIKLQEFDSNIDIINLRNGLYNWKTGEFFPHTPDYYSLNQKPIVYNPKARPKYFIK
                     FLKEVLWTDDILTAIDIIAYTFLKYNLHEYYFILIGVGANGKSVFTGLVTNLHGLKNV
                     SNVSLNSLVTNRFALAALENKDVNIDTELSSATIKDISILKKLTGKQPITIEKKGIDP
                     YDTILHAKQIFNANQMPNIPDSSDARYRREIPLSFPFQFEGSRDDPELLNKLSTEEEL
                     SAILNIITIALKRITKNGGGIYLNQKQ"
     gene            4876..5193
                     /locus_tag="VLA74_01070"
     CDS             4876..5193
                     /locus_tag="VLA74_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49324.1"
                     /translation="MNDAISEDSIESDYEIKEDVYRAYTRFCKYHKLPMQSYETFGEI
                     LKKDYNYKKDRKRINSKKQTVWAGIKLVKWNNNDPLQQTLLEESDDDNEGAEEDNNND
                     NAK"
     gene            5546..6040
                     /locus_tag="VLA74_01075"
     CDS             5546..6040
                     /locus_tag="VLA74_01075"
                     /inference="COORDINATES: protein motif:HMM:NF019884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HSF49325.1"
                     /translation="MAILKSKLELYLQQIFRMLLESKTEEAIAKELGVSTRTIQRYKV
                     ILDQRYGLIWKQKTNDTLFLECNLFKNRMLKLYKALEDVVTTDKTSGLEKAKCAEIAA
                     NIAIDVLKMESEGIRAVKELLAENVQGKNILDNLHRSQSKENEHDNDESNNIQPDYDP
                     NRKF"
BASE COUNT         2446 a          847 c          974 g         2022 t
ORIGIN      
        1 taatagatta cagaggtcta aacctcaaaa caattattac tatatgacaa ctttattcgc
       61 taaaacctta gatagaattg gaatgggttc tagagaagac ggaagtaatg aaattaggag
      121 aagaaaaata actctgcatt cttttagacg ttttgtaaaa actacaatat cggacttggg
      181 ttatgcagat tattctgaat ggtttatcgg tcattcaggt tctacctact ggcgaaaaaa
      241 agatgaggaa aaagcagaga tcttcaagaa aattgaacct tatttgactt ttctaaatgt
      301 tcctcagttg gaaagacaag gggcagactt acaaaccaag attgaagaat tacaggacat
      361 aaatcaacta ttaagatata agcaaaatga gaaagaggaa cagattaaaa agttagagga
      421 gtctgttgca tttttatccg atagatttaa tgcattttta ttaagtcagc ctgggaatag
      481 aattgtttac tatgatgatg ataacaacaa aaataataac gcaaatccaa gagatctgaa
      541 aggaattgaa ttaaagccag aaataaacag taataaagca gtaggagaaa tagcaatttc
      601 ttattctaat tcttcttcta ctaacagcaa caataagaaa aagcaattgt attaaaacta
      661 ttttaattta atattatttg tattaaaaaa agaaatttta gtgagaaatg gtattttatc
      721 agcagaagat tcaaaggaga aaccagtagt tattacttgt cttcgctgtg tgttagtaaa
      781 tcaacatgaa aataaatatt gtccaaaata cagttatcca ttaacaccac aagcatatga
      841 tgaagtcaag atatctgata atatcaaata tcatgaatta gaaaaaagat atgaaaggga
      901 tctgaacgca ttaagagaag atatggaaaa taaatttcaa gtactattat caaagataga
      961 actttctaaa cttgtttaag ttttagatat tttttgtaaa tatccattaa tttaactact
     1021 cccaagtcat ctataagatg agatttatca atcaaattgt tgttctcttt ctttaatttt
     1081 gataatatac tatcttgagt ttgattctct gtaatttcat ccatttctgt aacttcactt
     1141 tgtatatctt ctgttggtgg ttgagcaaat aaaaacaaag ataatgttac ttcatcaata
     1201 ttatttgcta cactctcatt tatcaaatta aaatcatcat aatatagttc tctaatatct
     1261 tctaatagca ataaggatat atctacaaat gggagttttt cctctacttc attttctgca
     1321 ttgaaataat aattaggatt gaaaatatat ttatcattca cttcctgtag ttctccaact
     1381 agtaaaaata tcttttctat tttactcatt attattttta aaataatttt attcgctatt
     1441 tcattaacgt catattcgtc aataatttct gaatatctat ttaatatgac agtaagtata
     1501 ttctttcgat aatacgtttc caatttaaag gcagatctca ttatactttc aaaagattct
     1561 atttctacag gattccagcc tttttttctt aatttgtttt ttacgatatt gtattgtatc
     1621 tctgcatcgc tattttctcc aacttcaaaa ttatgttcta ttatcgtttc tctaagtttt
     1681 gtataactat tatagcatct ctcgaaggca tctataaaat taattatttc atttcctaat
     1741 ggtgtaagaa tcattatctc tttttgttta tatttagtta ttgatctatc aatttctata
     1801 aattctatat cctgtaatag acgaatggtt tttaaaattg caggtttatc tttactaccg
     1861 gtagtttttt ctagttcttt tactatctta tttgaccata attcctcatt ttgtttcgca
     1921 taaaacactt ttaaaatatc tatacatctt tcaactggta gttctatcat gccggttgtc
     1981 aacaactact agttttaata ttataaatgt ttatcatatt atgatgattg aaaaagatgt
     2041 atatgttgtt caaccttaca aggtaggaac aaaaacaaaa gcaagtttag caatgatcat
     2101 tccagcacaa attgtaaaaa atcaaaaatt agatccttca acaatttttg taattagagc
     2161 agaagaaagt gaaaaaaaga tcattttgga aagaattgat attccctctg aaagaggaag
     2221 agtagtatct gttggcgaga cttctgaggc ttccagccag cagataccta ctacatacgt
     2281 accataaggt tggtaaaccg tatgtcctgt gactcatata atacaattcc tacatttaag
     2341 gaatgtgctg gaaagaactg tcctaacgat gcaacagtaa aactaaaaat aaaatttatt
     2401 aaaaaaattg gttatttttg tgaatcttgt acttcagaat taaaaacttt ggatcttact
     2461 gaacaagagg aaatagatgt agatcagagg gtaggaccct cgttaaatat caatatggaa
     2521 gatgaatagt tcaaatacta atatatttaa tgaagtggct aatttcttgt ttcatagaat
     2581 aggtgctaat cctcttcctg ccgacacaaa aaataagaga atcaatatac cttggggaga
     2641 atttcagaat aaatctattc cagaacaagt acacgaatct agcaaagaaa aaggtgaata
     2701 tgacaatgga atagcagtta tgaccggtag aatccataaa ggcaaaaatg aaggtaagta
     2761 tttaacagga atcgattgcg ataacaaaaa agccattgac gagatctgca attctttagg
     2821 atttaaaaat atagatgaat tggctaattg gacttgggtg gagcaacata aagataatcc
     2881 agataaggca catatttaca tactttcaac aaagtcatta aagaataaag gtaaggatcc
     2941 aaagaaggta gagatagaat cattaaatga aattccagca attgaagtaa aatgtgaaag
     3001 acaaaatatg ttcactgcac cttcaataca tgaagatgga tatccatatg aaattttagg
     3061 aacaagagaa ccagttttat gtaatgacga gtttgaaaat catttagata atatatttag
     3121 aaaatacgga atagaatatc ttcataatag cagtgaacaa aataataata atagtacttt
     3181 acctgatcca cttagacaat taactctttt attagaaata cctcctgatt ttaagtttag
     3241 gattcaccaa ggttctagac ataatacaat ggtatccttt gcaaacaaac ttttgtttaa
     3301 gtacaaattt gataataaca ataatggaaa taagttaaaa gatttcttta atgaggtaaa
     3361 tgataaactt tgtattccgc cattgcctaa agatgaaatt aatagtatat ggcgagatgc
     3421 tttaaaattt tcagataaca agtttgcaga aatgcaaatt gtaaatgagg atgaagatga
     3481 tattcaaaat tataaatctc ctattgttgt ccaattagac aaaagtgata aattactaca
     3541 taaggaaatt gtacaaaatt ttgtttatga catacagaca aatagtattg attgcacact
     3601 taattcaaaa tatgatctaa caaaaattat agttccaatt aatataaagc aatggcctga
     3661 tgttcgtaaa acttttagaa aattgtgtga agaaaaagga ataaaagaag atgatatttg
     3721 tcttttgtta gaatctatag ataacaatgc tgaccttata aagaagtatt atctagaaaa
     3781 taataggaaa cataatgcaa cagtagcagc aacagaagaa cgaaagaagc aaagactgca
     3841 acttattcaa gaaggcacag attttgtcat ggcaaaatat agattttcga cagttgaaga
     3901 gtctaatgaa attttatttt atgatagcaa taagggcgtt tatacttctg gtggtcacat
     3961 catcatagat aaagaaattg ataaaaaata tggttataaa cttaaaacag ccgatattac
     4021 agaaataagg aattatgtta gacgtaagac atacataaaa ttgcaagaat ttgattccaa
     4081 tattgatatc ataaatttaa ggaatggatt atacaattgg aagacaggcg aattctttcc
     4141 tcatactcct gattattatt ctttgaatca gaaacctata gtatataatc caaaagcaag
     4201 accaaaatac tttataaaat tcttgaagga agttttatgg actgatgata tactaactgc
     4261 aattgatatt atcgcttata cctttttaaa atataatctt catgaatact attttatatt
     4321 aattggtgta ggtgctaatg gtaagagtgt ttttacaggg ttggtaacaa atttacatgg
     4381 tctcaaaaat gtaagcaatg tttctttaaa ttcattggta actaatcgct ttgcattagc
     4441 agccttggag aacaaagacg ttaacattga tacagagtta tcaagcgcca caatcaaaga
     4501 tatatcaatc ttaaaaaaat taacaggtaa acaaccaata acaattgaaa aaaaaggtat
     4561 agatccatac gatacaattt tacacgctaa acagatcttt aatgccaacc aaatgccaaa
     4621 tattccagat agttctgatg ctcgttatag aagagagatc ccgcttagtt ttccatttca
     4681 gtttgaaggt tcaagagatg atccagaatt gctaaacaag ttgtcaacag aagaagaatt
     4741 atctgcaata ctaaatataa ttacaatagc cttgaaaaga ataaccaaga atggtggagg
     4801 aatataccta aaccaaaaac aataaaagaa aggagggaaa aggcagaatt aattaataat
     4861 cctattaaat cgtttttgaa tgatgctatt tctgaggatt ctatagaatc agattacgag
     4921 ataaaagagg acgtttatcg tgcatataca agattctgta aataccataa actgccaatg
     4981 caatcatatg aaacttttgg agaaatattg aaaaaggatt acaattacaa aaaagataga
     5041 aaaaggataa acagtaagaa acagacagtt tgggcaggaa ttaaacttgt caaatggaat
     5101 aacaatgatc ctttacagca aaccttgttg gaagaaagtg atgatgataa tgaaggagca
     5161 gaagaagaca acaataatga taatgctaaa taatcttaga tttcatgcgc gtggacacag
     5221 tggacccact ggacctatcc taactcggta cagaaaaaaa ttttttatta tttttgtgct
     5281 taaaagcaca aaaatgatga gtacaatttt gcaaataaat ttttttcatt ggagtaaagg
     5341 tatgtccact atgtccagtg tgtccactat aaatgacgag gtgaaagagt gatattttga
     5401 ctatcaaatc aagcatatta actgaaagac aaaaaacaac aatactaaat tctggattta
     5461 ataatattaa taataataat ttattctatc attatttgtc aggttttgtc gtgatttctg
     5521 aataaataaa gtagggatta gtattatggc aattttaaaa tctaaacttg aattatattt
     5581 gcaacaaata ttcaggatgc tactagaatc aaagactgag gaggctatcg ctaaagaatt
     5641 aggtgtttca actagaacta ttcaacgtta taaggtgatt ttagaccaaa gatatggatt
     5701 gatttggaaa caaaagacaa atgatactct ttttctggaa tgtaacttgt ttaaaaatag
     5761 gatgctcaaa ctatacaagg cattagaaga cgtagttact actgataaaa cgtctggatt
     5821 agaaaaagcc aaatgtgctg aaattgctgc caacattgct atagatgttt tgaagatgga
     5881 aagcgaaggt atcagagcag ttaaagagtt actagcagaa aatgtacaag gaaaaaatat
     5941 tctagacaat cttcatcgca gtcaatctaa agaaaatgaa catgataatg atgaatctaa
     6001 taatattcaa ccagactatg acccaaatag gaaattttag taatatgtat tactaaaaat
     6061 aaagttctta attattttat aataagtatt ttttaaaaaa ttcaactaga caaaaaatta
     6121 ttaaatcatt aattattcca ttagttatat gcaatattta gcaaccaaaa ataaactaat
     6181 ttttactatc attataatta ctactacatt tgctttatcc aatattttat attttgtatg
     6241 ggctgatgaa actatcccaa tagtttcaac tagaggtcat tttgataaa
//
LOCUS       DATIAS010000055         2667 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1919355, whole genome shotgun sequence.
ACCESSION   DATIAS010000055 DATIAS010000000
VERSION     DATIAS010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1919355"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VLA74_01080"
     CDS             <1..200
                     /locus_tag="VLA74_01080"
                     /inference="COORDINATES: protein motif:HMM:NF021357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HSF49326.1"
                     /translation="ITREHAKVDRIACPWLIKNFVDNEAKFLFVPAHKVLEIMRNENA
                     IPCDIPNVELGHHGNECSFYS"
     gene            418..1710
                     /locus_tag="VLA74_01085"
     CDS             418..1710
                     /locus_tag="VLA74_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49327.1"
                     /translation="MVVKKLLNKLRKGQQEYYIFLAKECFSGFSNAENNFNIYRYPAC
                     YTGLFHSSEFFWKALTILSGNYFDPKHEASQADMRKISEDLLSNDERTRAYNILSNFP
                     DNRRNLARYGYYEKGIVTASPNEVFNREDTEKSLHEVSWLVNKLREIHYYQIFEPPIR
                     IGILSGYILTRKEKPCSYYPHSQYRKAVQWMLDLNDIKYDNKSNLFQASVTPISNLSN
                     GAFSIVINPFGEVYPELGNAEGIGFRTIMSYIQDGGILINSGGQPFVYSWDINTGNHK
                     LLVNFIPTLSNIESTYVEGTPLLSINESLGIPHEALLLKRYFNVETEWDHPEKDIVGP
                     KEVDIEFDEFLGNDKPKTKAKVYRPVKELSHNIRPLVHSYSESLWGSIYPVIAIKFGR
                     GFLIHTGMSLDEEREYKILLDIIRRLSLVGYETLAKLL"
     gene            complement(1721..1873)
                     /locus_tag="VLA74_01090"
     CDS             complement(1721..1873)
                     /locus_tag="VLA74_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49328.1"
                     /translation="MEEGQQQVCCDENIPCVPTNAEKNNISNNKKALFFIATTTDSLD
                     TAHICI"
     gene            complement(1933..2118)
                     /locus_tag="VLA74_01095"
     CDS             complement(1933..2118)
                     /locus_tag="VLA74_01095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49329.1"
                     /translation="MDDTLDDTFLVSSNKNDEIHEQKSGFGRLDDVDDTLHVKVRKHL
                     SQGKNLKCHHKNCNSYH"
     gene            complement(2407..2604)
                     /locus_tag="VLA74_01100"
     CDS             complement(2407..2604)
                     /locus_tag="VLA74_01100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49330.1"
                     /translation="MTQSQIISKTDTLRIYFNNHYGAKAVINAFEFKKMLGISLSKRE
                     TNALIFAKSYYSRPPPTLDHI"
BASE COUNT          921 a          374 c          439 g          933 t
ORIGIN      
        1 ggataacaag agaacatgcg aaagtagaca gaattgcatg tccttggctt ataaagaatt
       61 ttgtagataa tgaagccaaa tttctatttg tacctgccca taaagtgctt gaaataatga
      121 gaaatgaaaa tgcaattcca tgtgatatac caaacgttga actaggtcat catggcaatg
      181 aatgttcatt ttactcttga aaatgtgctt agaatagtgg gaaaatctgt tttataaata
      241 aaaatgtata tagaattata attgaatttt tacgttgatc tatctaaaat tagccttatg
      301 tccgttacat agatagaact gattgttcaa ttatttttaa tttaatatta atgacaactg
      361 aacattatat acttcaagta gaagtctcaa aatataagta aaggtacatt ttcaactatg
      421 gttgttaaga agctcctaaa taagttaaga aaaggtcagc aagagtatta catttttctt
      481 gctaaggaat gtttttcagg atttagtaat gcagagaata atttcaatat atatcgttat
      541 cctgcatgtt atacagggct ttttcattcc tcagaatttt tttggaaagc attaacaatt
      601 ttatctggta attattttga tcccaagcat gaagcatccc aagcagatat gagaaagata
      661 tctgaagatt tactatccaa tgatgaaaga acaagagcgt ataatatttt aagcaacttt
      721 ccagacaata ggcgaaacct ggcaagatat ggctattatg aaaaaggaat tgtgactgca
      781 tctccaaatg aagtatttaa tagagaagat actgaaaaaa gtctacatga agtaagctgg
      841 ctagtaaaca aacttagaga aattcattat tatcaaatat ttgagccacc gatcagaata
      901 ggaattcttt caggctacat tctcacaagg aaagaaaaac cctgttcata ttatccgcat
      961 tcacaatata gaaaagctgt tcagtggatg ttagacttga atgacatcaa atatgataat
     1021 aaatcaaacc tatttcaagc atcagtaaca cctatctcaa atttgagtaa tggagctttt
     1081 tcaattgtaa taaatccatt tggcgaagtt tatccagaat taggtaatgc agaaggtata
     1141 ggattcagaa caattatgtc ttatatccaa gacggtggaa ttcttattaa ttctggaggt
     1201 caaccttttg tttacagctg ggatataaat actggaaatc acaaactttt agttaatttt
     1261 attccaacat taagcaatat tgaaagcact tatgttgaag gaacgccttt attatctata
     1321 aatgaaagtt taggcattcc tcacgaagct ttacttctaa aaagatactt caatgtggaa
     1381 actgagtggg accatccaga gaaagatata gtaggcccaa aagaagtcga tattgagttt
     1441 gatgaatttt tgggtaatga caaaccaaaa actaaagcta aagtttacag gcctgtaaaa
     1501 gaattgtcac ataacattag acctttagtt cattcttatt ctgagtcatt atggggtagt
     1561 atttatcctg ttattgcgat taaatttgga agaggatttc taatacatac gggaatgagc
     1621 ttagatgagg aaagagagta taaaatattg cttgatatta taaggagact aagtcttgta
     1681 ggttatgaga ctcttgcaaa gttactttga tagaagaggt ctatatacag atatgtgctg
     1741 tatctaatga atcagttgtt gtagctataa aaaataatgc ttttttatta tttgaaatat
     1801 tatttttttc tgcattagtt ggcacacagg ggatattttc gtcacagcaa acttgttgtt
     1861 gtccttcttc cactttttga tctaaatgat atgctttttt tcataatctt gtaacaagca
     1921 tctaattttt ctttaatgat aagaattaca atttttgtga tggcatttta gattttttcc
     1981 ttgactgaga tgtttcctaa ctttaacatg taaagtatcg tcaacatcgt ccaatcgtcc
     2041 aaaaccactt ttttgttcgt gaatttcatc atttttatta gacgatacta aaaaggtatc
     2101 gtccaaagta tcgtccaaag atttgatatg attttgttct tgatttttta gttcttgacg
     2161 atacggcgat attgacgata ctttacaatt ctattactat tttttgcaat aatttttttg
     2221 gcgtcgcaaa atatcctttt tattcttttt acttattatt attaaaacat aatacaatga
     2281 taaattaata gtgcagaggg actcgaaccc tgcaactaca ttcgtcggtt tattatttta
     2341 tttaagtcaa ggaaagctag atctctgact tttctaaatg ttgtggcaca tttagaaaac
     2401 aaatttctaa atatgatcta aagtaggagg aggtcttgaa taataactct tggcaaatat
     2461 taatgcattt gtttctcttt tagataggga tattcctaac atttttttaa attcaaatgc
     2521 attgataact gctttagcac catagtgatt attaaaataa attcttagag tatcagtttt
     2581 actaattatt tgagactggg tcataattca gttaacaaat aatgtacaac attagcataa
     2641 tcaatcttta tgttccaagc atgtatt
//
LOCUS       DATIAS010000056         2267 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_420695, whole genome shotgun sequence.
ACCESSION   DATIAS010000056 DATIAS010000000
VERSION     DATIAS010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420695"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            373..510
                     /locus_tag="VLA74_01105"
     CDS             373..510
                     /locus_tag="VLA74_01105"
                     /inference="COORDINATES: protein motif:HMM:NF039193.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5679 domain-containing protein"
                     /protein_id="HSF49331.1"
                     /translation="MEAYCVKCKSKRLMKDEKKVTMKNGKPATQGICTTCGTKMFRIG
                     K"
     gene            complement(802..1134)
                     /locus_tag="VLA74_01110"
     CDS             complement(802..1134)
                     /locus_tag="VLA74_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF49332.1"
                     /translation="MKYRSRTEIVGLILEAANGGGATKTKIMYKAFLSFAQLREYLTM
                     LQDNKLIEYEGEKQTYRTTEKGMRLLHIYNKMYELVPPLTTMAATERDIKVEHSNSSN
                     DSDMSFSQ"
     gene            complement(1395..>2267)
                     /gene="fen"
                     /locus_tag="VLA74_01115"
     CDS             complement(1395..>2267)
                     /gene="fen"
                     /locus_tag="VLA74_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease-1"
                     /protein_id="HSF49333.1"
                     /translation="KGNITSHLSGLFYRNINLLAENLRLIYVFDGKPHHLKSKEIERR
                     KRIKQEAVEKYQEAITEGRFEDARKFGQATSVLTQTMVEESKRILALLGIPVIQAQSE
                     GEAAAAYLTKSDNAFCAASQDYDSILFGAKRLVRNLTISGKRKVPNRNLYLDIQPEII
                     KHVDVLDKMGLTHEQLVDIGILIGTDFNPEGVAGIGPKTALKLIREYGKLENIDKIKD
                     KIVQIPYQDIRDIFLNPEVPKINIIEYTDVDYSNVVDFLCGEKDFSRERVTAALDRLK
                     KSISSRNQSLENWF"
BASE COUNT          709 a          390 c          336 g          832 t
ORIGIN      
        1 gtttacaacc ttccctttca aatgtgtttg taaaaatctg gaaaaattct ctttaccaga
       61 ggacagcaat tcgaaccttt actaatatcg atgcatatac cgtacacgtc acatcgaata
      121 gcatgacata cttggaagat tttcaaggac ggtggtaaag cgagttatat ttacaaatta
      181 tctgacgtat tatgcactaa atatataaat aatcatcagc tttacaaata ctttcaagaa
      241 taatcatact taggattaga tctagaatca tagtatcata acgataattt aaaaaaggat
      301 aagtctcgct aggctttctg acaatcattt tttacactac ttcttttatt taggctcttt
      361 tactgcatga gtatggaagc atattgcgtt aagtgtaagt caaaaagact aatgaaagat
      421 gaaaaaaagg tcacaatgaa aaatggtaaa ccagctaccc aaggcatttg tactacttgc
      481 ggaactaaaa tgtttagaat aggtaaatga ttttgaagta taagtataag aatatgtcat
      541 ccccttgggc agatacaata taatacaata caatgttttt gcaatcttat tcgattgtaa
      601 atgtcataaa tattataata ttgtaaatta actctaattt ttttaagttg tcttattaag
      661 gcataaaatc atggactttt ggattacatg gtcaaaaaag tgttttggaa tcagcccgag
      721 gacaaaatag agctgcacgg attattactt gaccaaatta cgcttccatt cctagttata
      781 accaatgaat tatgattttt atcattgact aaaactcatg tcgctatcat tactgctatt
      841 actatgttct actttaatgt ccctctcagt tgcagccatt gttgtaagtg gtggtactaa
      901 ttcatacatc ttgttataga tatgtagtaa acgcattcct ttttctgttg ttctatatgt
      961 ctgcttctca ccttcatatt caataagttt attgtcttgt aacattgtaa gatattctcg
     1021 gagctgagca aatgatagaa atgctttgta cattattttt gtcttggttg ctcctcctcc
     1081 atttgcagcc tctaggatca gacctacaat ttctgttctg cttctgtatt tcataataga
     1141 atcaaataga acatgtaaac tagatattta tgtgaacctt ctattattac tgataattac
     1201 attagtatgt atttaattaa aatatttagc tgttgcatta attataatta tctgatctta
     1261 gaagtgatca ttctactaga aaaatagtat atcctcattg atagttatac tgtatgtccg
     1321 tgcagcgata gagcgatcta taagtagcca atagtatcac tagtataata ctttttttac
     1381 tatgtacggg tattttaaaa ccaattctct agagattgat tgcggcttga tattgatttc
     1441 ttaagtctat ctaaagctgc agtcacccgt tctctagaaa aatctttttc tccacaaaga
     1501 aaatcaacta cattactgta gtcaacatca gtatattcaa taatattgat ctttggaact
     1561 tcaggattca gaaatatgtc gcgaatatct tgataaggga tttgtactat tttatctttt
     1621 attttatcta tattttccaa tttaccatat tctctaatca attttaaagc agtcttggga
     1681 cctattccag ctacaccttc aggattaaaa tctgtgccta ttaaaattcc aatatctact
     1741 aactgttcgt gagtcagtcc cattttgtca agtacgtcta catgtttgat aatttctggc
     1801 tgaatatcta aatatagatt tctattaggt acttttctct taccacttat agtaagattg
     1861 cgtactaatc ttttcgctcc aaataatatt gaatcataat cttgactagc cgcacaaaaa
     1921 gcgttatcag atttggtcaa ataagctgct gctgcttctc cttctgattg agcttgaatc
     1981 acaggtattc ctaaaagagc gaggattctt tttgattctt ctaccatagt ctgtgttaaa
     2041 acggaagtgg cttggccaaa tttccttgca tcttcaaatc ttccttctgt tatcgcttcc
     2101 tggtattttt cgacagcctc ttgcttaata cgttttcttc tctcgatttc ctttgatttt
     2161 aaatgatgag gtttaccatc gaaaacatat atcaatctta gattttcagc tagcaagttt
     2221 atgttacgat aaaataaacc actcaaatga ctggttatat ttccttt
//
LOCUS       DATIAS010000057         2100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1919620, whole genome shotgun sequence.
ACCESSION   DATIAS010000057 DATIAS010000000
VERSION     DATIAS010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1919620"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VLA74_01120"
     CDS             <1..239
                     /locus_tag="VLA74_01120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49334.1"
                     /translation="IKFESYEPKALWLVKELIDVYLQKEYTFHIKEIVHHIGSGKMFL
                     VDDSGTYYGLLQNGTMVRLSTEQRRRAKTGGLFL"
     gene            260..460
                     /locus_tag="VLA74_01125"
     CDS             260..460
                     /locus_tag="VLA74_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49335.1"
                     /translation="MTKITFNINEFVGTPIEKIKQKYDLWLSIVQDDITEEKIGTLDY
                     SYCEGKKKVLQELIEDLGRLEL"
     gene            457..675
                     /locus_tag="VLA74_01130"
     CDS             457..675
                     /locus_tag="VLA74_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49336.1"
                     /translation="MNNEKIQSLIKKYKKEIGNRRQLIDYFYSKEEPTRDYYAKIKYN
                     KLRQEKDKVSIEIGIFLENIEDLEELLK"
     gene            672..854
                     /locus_tag="VLA74_01135"
     CDS             672..854
                     /locus_tag="VLA74_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49337.1"
                     /translation="MRYETNAYYFIMRYNKSNGNYEVLKRITGIGKKKLEYMLNYYEN
                     ERYPDDFIFLTKGVDE"
     gene            858..1079
                     /locus_tag="VLA74_01140"
     CDS             858..1079
                     /locus_tag="VLA74_01140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49338.1"
                     /translation="MKVEEWKEIRSKDRTLELESGIKTLLGEFEEKIKITEKQAFRMK
                     TKNNLRYEQLCSELGIYDDIVKGLEELLK"
     gene            1076..1504
                     /locus_tag="VLA74_01145"
     CDS             1076..1504
                     /locus_tag="VLA74_01145"
                     /inference="COORDINATES: protein motif:HMM:NF016798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUN14 domain-containing protein"
                     /protein_id="HSF49339.1"
                     /translation="MTTEAITTDLLIGGVSGTAIGFGIGWTVKKAFKLLFKFIIVLAI
                     FYVGSLLYLKSQGVININEKAGQNLIDNSVNNMNNFLGATKICDDNTLINSANMVVNE
                     ACLNDIVTSPTSAIHQTIASLGLPLTTGLGFGMLLGWSKG"
     gene            1501..1725
                     /locus_tag="VLA74_01150"
     CDS             1501..1725
                     /locus_tag="VLA74_01150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49340.1"
                     /translation="MIKKVPVCSKCGSGNLEKIVWTKMVSKFKWSEEHQSWNWNPLSK
                     KIYIPTTKKARHWCNNCNYYQRVKWLTRKE"
     gene            1734..2051
                     /locus_tag="VLA74_01155"
     CDS             1734..2051
                     /locus_tag="VLA74_01155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49341.1"
                     /translation="MSLGIIGLGIIKSKKKNMRRFQVGETGVYLYHSNNIFDEKLGYY
                     YAKVFEDEKRKKKVYCERHPIVQLVVAMEDIEDLPFCLVCLQEMDGIEKAYEQGLIGR
                     YLK"
BASE COUNT          885 a          201 c          402 g          612 t
ORIGIN      
        1 agataaagtt tgaatcgtat gaaccaaaag cactatggtt agtgaaagaa ctaatagatg
       61 tatatcttca aaaagaatat actttccaca taaaagaaat tgtacatcat ataggaagtg
      121 gaaagatgtt tcttgtagat gatagtggta catactacgg acttttacaa aacggaacaa
      181 tggttagatt gtcaacagaa caaaggagaa gagcaaaaac aggagggctt tttctctaat
      241 tttttttgag gttagtaaaa tgacaaaaat aacattcaat atcaatgaat ttgttggaac
      301 accaatagaa aaaatcaaac agaaatatga tttatggtta agtattgtac aagatgatat
      361 aacagaggaa aaaataggga cacttgatta ttcttactgt gagggtaaaa agaaagttct
      421 acaagaatta atagaagatt tagggagatt agaactttga ataacgaaaa gattcaatca
      481 ttaattaaga aatataaaaa agaaatagga aatagacgac aactgataga ttatttttat
      541 tcaaaggaag aacctacaag agactattac gcaaaaataa aatataataa acttcgacaa
      601 gaaaaggata aagtatcaat agaaataggt attttcttag aaaatataga agatttagag
      661 gaattattaa aatgagatat gaaactaacg cctattattt tattatgcga tataataaga
      721 gtaatggaaa ttatgaagta ctaaaacgta ttactggtat aggtaaaaag aaacttgaat
      781 atatgttaaa ttattatgaa aatgaaagat atccagatga ttttatcttt ttaactaaag
      841 gagtagatga ataaaaaatg aaagtagaag aatggaaaga aattagaagt aaagacagaa
      901 ctttagaatt agaaagtgga attaaaacac tacttggaga atttgaagaa aaaataaaaa
      961 taacagaaaa acaagcattt agaatgaaaa ctaagaataa tctaagatat gaacaattat
     1021 gtagtgaatt aggaatttat gacgatattg ttaaaggctt ggaggaatta ttaaaatgac
     1081 aacagaagct atcactactg accttttaat cggtggagta tcaggtactg caataggatt
     1141 cggaattgga tggacagtaa agaaagcatt caaactactt tttaaattta taatagtcct
     1201 ggcaattttt tatgtcggtt cattattata tttgaaaagt cagggagtta ttaatataaa
     1261 cgaaaaagct ggtcaaaact tgattgataa tagtgtgaat aacatgaata attttcttgg
     1321 cgcaactaag atatgcgatg ataatacttt gataaattct gcaaatatgg tagtaaatga
     1381 agcatgtttg aatgatattg ttacaagtcc tacaagtgct attcatcaga ccatagctag
     1441 tctaggtctc ccattaacga caggtcttgg attcggaatg cttttggggt ggtctaaagg
     1501 ttgataaaaa aagttcctgt atgttcaaaa tgtggttctg gaaatttaga gaaaattgtt
     1561 tggactaaaa tggtatcaaa atttaaatgg agtgaagaac atcaaagctg gaattggaat
     1621 ccattatcta aaaaaatcta tattccaact acaaaaaaag ctagacattg gtgtaataac
     1681 tgtaattatt atcaaagagt aaaatggtta actagaaagg agtaagggtt aaaatgagtt
     1741 taggtattat aggattaggt ataataaaaa gtaagaaaaa gaatatgaga agatttcaag
     1801 taggagagac aggagtttac ctgtatcatt caaataatat ttttgatgaa aaattagggt
     1861 attattacgc caaagtattt gaggatgaaa aacgtaagaa aaaagtatat tgtgaaagac
     1921 acccaattgt acagttagta gttgctatgg aagatattga ggatttacct ttctgtcttg
     1981 tatgtttgca ggaaatggat ggaattgaga aagcgtatga acagggattg atagggaggt
     2041 atttaaaatg aataaaacta agaaaaaaaa atataatatc tctgttgata tagaacagct
//
LOCUS       DATIAS010000058         2543 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_421110, whole genome shotgun sequence.
ACCESSION   DATIAS010000058 DATIAS010000000
VERSION     DATIAS010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421110"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(264..1700)
                     /locus_tag="VLA74_01160"
     CDS             complement(264..1700)
                     /locus_tag="VLA74_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSF49342.1"
                     /translation="MKNIRSIIDSNMNDLVSDLQLLIRQPSVSAKKNGLLECSHLVKK
                     LMEKAGIETELLYLQENNTNNKNNNLKINSEIDSICTMPPLIYGEVKSKRNPNGKTLL
                     FYNHYDVQPEDPIELWENKEPFSGRINGNYIYGRGSSDDKGELITRIKAVEYLLKSYG
                     DVPCNIKFIVEGEEEIGSPNLEKFLLQYKEKLKCDGVIWEFGYIDEKERPIIMLGVKG
                     ILYVELVSKGGPSREVHSSLATLIENPAWILVDALKTLRNSDGRILIKDWYREVRNFS
                     QDELNILDKEPFDEEIFKKEYGISKFLNNVKGIDVKKFFEGKPTCNISSLIAGYSGEG
                     SKTIIPYKAIAKLDFRLVPDMDPIVQFKRLCDHFRNHGFTEDLLEVNLLQKEWPARTT
                     PVDSPFIKVIEESATDIFGSTIKSISSAATGPMHYFLDLLDVPCVCIGSSYKYGKSHS
                     PNEFARLDLLNKTTKCISTIIEKFGNLN"
     gene            complement(1805..>2543)
                     /locus_tag="VLA74_01165"
     CDS             complement(1805..>2543)
                     /locus_tag="VLA74_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49343.1"
                     /translation="NPTYAVMMFNHILNLISSAIVLGANSKLFAGKVFSFHEPRIYLY
                     DHSEQQNSGFPAIAAYMNNMNDYIDYIKSRKPILARDYFELEKERHDDVRIRLNSEFY
                     RVETRIVSVQVAPKALMAMIEFFVGYLYKSILEESYGQKLLRNLSILREERQASVQSG
                     FYASSHFSMIDTIKVQLDYARKGLSDLNVKPEFLNVLDSRVKNRISPSEYVANLWDEK
                     FNGSINQTVFEIISHMWDRTKKNHPIM"
BASE COUNT          825 a          419 c          328 g          971 t
ORIGIN      
        1 atttacaaaa ctcaaaattt tactcaatca gcagaaggac ataaggatgg aatgtggaca
       61 acagttttaa gtgctgcagt ctttattcta taactttatc aatttgaaat gaatatttga
      121 aaagaatata tatattaagt agtggattaa aaatacaatt ataattcaaa aatattttta
      181 taagatatat tattttattt ttactttaat tattatttta tttcctgttt ctaactattc
      241 aatgatgcag ttcattatta attctagttt aaattcccaa acttttcgat tattgtactt
      301 atacatttgg ttgttttatt taatagatct aatctagcaa attcatttgg tgaatgagat
      361 ttaccatatt tataagatga tccaatacag acacaaggta catctaagag gtccaaaaag
      421 taatgcatag gtccagttgc tgccgatgat atacttttta ttgtagaacc aaatatatcg
      481 gtagcagatt cttcaataac ttttataaat ggagaatcaa ccggtgttgt tcgtgctggc
      541 cattccttct gcaataagtt aacttctagt aaatcttcgg taaatccatg gtttctaaaa
      601 tggtcacaaa gccttttaaa ctgcacaatt gggtccatat ctggtactaa acgaaaatct
      661 aattttgcaa tagctttata tggaattatt gtcttagaac cttctccact atacccagct
      721 atcagactgc ttatattaca tgttggtttt ccttcaaaga attttttaac atcaataccc
      781 tttacattat ttaaaaattt actgatgcca tattcttttt taaatatttc ttcgtcaaat
      841 ggttctttat ctaatatatt gagctcatct tgtgaaaaat tcctaacttc tctataccaa
      901 tcttttatca aaattctacc atcactattg cgtagtgttt tgagtgcatc cacaaggatc
      961 caagcaggat tttctatgag tgtggcaagg ctagagtgga cctctcgtga tggtcctcct
     1021 ttagatacaa gttcaacgta caagatacct ttaactccta acataataat tggtctttct
     1081 ttttcatcta tgtaaccaaa ttcccatatt acaccatcac actttagttt ttctttatat
     1141 tgtaaaagaa acttttctaa gtttgggctt ccaatttctt cttcaccttc aactataaat
     1201 tttatattac aaggaacatc tccataactt tttaaaagat attcaactgc ttttatcctt
     1261 gttattaatt ctcctttatc atctgatgat cctctcccat aaatataatt tccattgatt
     1321 cgcccactaa aaggttcttt attttcccat aattcaatag gatcttctgg ttgtacatca
     1381 taatggttat aaaataaaag agtcttccca ttgggatttc tctttgattt aacttcccca
     1441 tagattaatg gaggcatagt acaaatacta tcaatttcag aatttatttt gagattatta
     1501 tttttattat tagtattatt ttcttgaaga taaagcaact ccgtttctat accagctttt
     1561 tccattaact tttttactaa atgagaacat tcaagcaatc catttttctt ggcagaaaca
     1621 cttggttgcc ttattaagag ttgaaggtct gaaacaagat cattcatatt tgaatctatt
     1681 atagacctaa tatttttcaa attaactatt tttatgaggt tcgaggatat atatttaaac
     1741 ttgtaaatat caataaaaat aaataagaaa taataattag tagttttatc tacctaagat
     1801 tatgctacat tattggatga tttttttttg ttctatccca catatgagaa attatctcaa
     1861 atactgtttg atttattgat ccattaaatt tctcatccca taaattagca acatattcgc
     1921 ttggcgagat tctatttttt actcgactat ctagtacatt taaaaattca ggtttaacat
     1981 ttaaatcaga taatcctttt ctggcgtaat caagctgaac ttttattgta tctatcatag
     2041 aaaaatgaga tgatgcatag aaacctgatt gtacagaagc ttgtctttct tctcttagta
     2101 tagaaaggtt tcttaacagt ttctgaccat atgactcttc aagaatagat ttatacagat
     2161 atccaacaaa aaattcaatc atagccatta atgcttttgg tgctacctgt acagatacta
     2221 tccttgtttc cactctataa aattcagaat ttaaacgtat tcgtacatca tcatgccttt
     2281 ctttttcaag ctcaaagtaa tctcttgcaa gtataggttt tcttgatttt atataatcaa
     2341 tataatcatt catattattc atgtacgctg caattgcagg aaatccggaa ttttgttgct
     2401 cagaatggtc atataaatat atccgaggtt cgtgaaatga aaatactttt ccagcaaaaa
     2461 gtttactatt ggcaccaagt actattgcag aggagataag atttaaaata tggttaaaca
     2521 tcattactgc ataggtagga ttt
//
LOCUS       DATIAS010000059         2421 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1647190, whole genome shotgun sequence.
ACCESSION   DATIAS010000059 DATIAS010000000
VERSION     DATIAS010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1647190"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VLA74_01170"
     CDS             complement(<1..631)
                     /locus_tag="VLA74_01170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49344.1"
                     /translation="MDIKISSKFAIVILGIGIFSTLLAFDKSFPVESANAQMNMGSGD
                     GGQGMGGGGQGMGGGGSFGMGGGGQGMGGGGSFGMGGGGAGHGMMVMNVPGAVQQICD
                     TSKDMLPSYCEPNYKVMSSVKGFKISTVNPIDDNELQVVIENINSMSNATTTMGQQNI
                     VVAGGGGDLAGSTVLDIAGGGSQKITSELKLIGSGSIYNLERIYLHLLPL"
     gene            complement(1287..1796)
                     /locus_tag="VLA74_01175"
     CDS             complement(1287..1796)
                     /locus_tag="VLA74_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49345.1"
                     /translation="MELSFAQKDVNENDVYATKLYLHNDLKGIKDKTLTITTSENTKS
                     LNEKVNDIVYLDFNHALLLHMIPDIKQNKYESSLSGDAIIPITLYPNMSSLEDARVYQ
                     NMSSLGHDRVYQNMTSLEQDRVYQNMSSLEDARVYQNMSSLGHDRVYQNMTSLEDARV
                     YQNMSSLAP"
BASE COUNT          827 a          410 c          334 g          850 t
ORIGIN      
        1 ttagaggtaa taaatgtaga tatatccttt ctagattata tatggaacca gatccaatca
       61 gtttcaattc acttgtaatt ttttgtgaac ctccaccagc aatatctaat acagttgaac
      121 cagcaagatc acctccacca ccagcaacta ctatattttg ttgacccatt gttgtcgttg
      181 cattggacat actatttata ttctcaatta ccacttgtag ttcattatca tctattggat
      241 ttacagttga aattttaaac cctttcactg aactcatcac tttgtagtta ggttcacaat
      301 aagaaggcag catatcctta ctggtatcac agatttgttg aacggcgcct ggtacattca
      361 tcaccatcat accatgacct gctcctcctc cgcccattcc aaaagagcca ccgccaccca
      421 taccttgacc acctccgccc attccaaaag agccacctcc gcccatacct tgaccacctc
      481 cgcccatacc ttgaccaccg tcaccgcttc ccatattcat ctgagcattt gcagattcaa
      541 ctggaaatga tttgtcaaat gcaaggagtg tagaaaatat tcctattcct aaaataacta
      601 ttgcaaattt tgaagatatt tttatatcca ttacggatag taatttaaaa atttgtaaaa
      661 tatgaaataa agttatactc tttaataata ttcaaaagta actggtccca ctttacagaa
      721 ggattcaaat tccacagaat cctttgcatc ttttacaaat aatataaaca tcaacattag
      781 atttcaaaat ttttaagtag attaattgat acataattaa atgattacaa aaagtaaagg
      841 ttatttccta cttcttttta tcattgcttc atgaattctt ctaaaaatag gattggaacc
      901 cagagttcaa tggggccagt ggtttccgct gtgatattgg tactaaaaat ggactcataa
      961 tattaaacta aaagcagata attaaacatt acgtttagtt agttatagaa tatcgtatac
     1021 tagaataatg aaatgagtta ttcaaactat tcttataata tacggatcat ctttaacctc
     1081 atttttaatc agttattaaa agaaaaaacc agtaatacaa ttataatagt atttgttagt
     1141 aattaaatga ttttaattta ttttaaacta atgtttattt ttcaaagtat caagtatggc
     1201 tattaaaagt taatacttcc tattctatgt tcaatattat ttgaatctct tgcaaaaact
     1261 tcaataaaaa aggatttctt ttgtctttat ggtgctagac ttgacatatt ttgatatact
     1321 ctggcatctt caaggctagt catgttttgg tatactctat cgtgtccaag actagacatg
     1381 ttctggtaca ctctggcatc ttcgagacta gacatgttct ggtacactct atcttgttca
     1441 aggctagtca tgttttggta tactctatcg tgtccaagac tagacatgtt ctggtacact
     1501 ctggcatctt cgagacttga catattagga tacaatgtta taggaataat ggcatctcca
     1561 gacaacgatg attcatattt attttgctta atatctggaa tcatatgcaa caagagagca
     1621 tgattaaaat ctaaatatac tatatcgttt accttttcgt ttaatgattt agtattttct
     1681 gaagttgtta tagttaatgt tttatcttta atgcctttca aatcgttatg aaggtataat
     1741 ttagtagcgt atacatcatt ttcattgaca tctttttgtg caaaagataa ttccaaaaac
     1801 gataaaaaca aaatactatt actactactg ataaaggaaa taatgataac aaacaaaaat
     1861 agaatttgaa tatgatttct ttctatcttc atagataaaa taattgggat aactatttaa
     1921 taattttata caaattattt gttattggta ttgcttgata aacaaaatta acatttactt
     1981 tcattaataa taacaatcaa aaaaatctag tggtttccat tgtgatattg attctaaaaa
     2041 tggattcaaa atagtaaacc aaaagcacat aattaaatat tatgtattag aattcatttt
     2101 tttagaattt ataaaactac cgctttaatc ttgattattt agattactct gaacgattca
     2161 ttggttatgc tggttctaag ttaagagcat tgtaatgttt catctagtga ttcttgtaaa
     2221 ataataataa taattatttg accaattaat tttataacaa tagctttagc taaccataac
     2281 gcacatatac tgtgtggaat atttacctca gagaaataag cacagaggag atgaatgacc
     2341 tttactggtt gctcgataac gatgatgcag aatcaggcta tcgtgccaga atgatcttgc
     2401 ttagagatga aggatacaca g
//
LOCUS       DATIAS010000060         6435 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_421215, whole genome shotgun sequence.
ACCESSION   DATIAS010000060 DATIAS010000000
VERSION     DATIAS010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6435
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421215"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VLA74_01180"
     CDS             <1..586
                     /locus_tag="VLA74_01180"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF49346.1"
                     /translation="SLRNTSKALVIFRDEKRSYVSVWNWIQRFGSCHIYNKRKRVSAF
                     IIDETVIQIGNQHFWLWICIEPIHSSVLGIYISEERNMLVAEKFIRSLVSIYGKHTVY
                     TDGGTWYNEACNVIGLKHYLHSSIEKSLMERVNQYFKDIIECFDDYYPCRQMECNLFH
                     VYNWIQFFVSMYNDTTFENYFINELNKRGEYVLN"
     gene            1523..2401
                     /locus_tag="VLA74_01185"
     CDS             1523..2401
                     /locus_tag="VLA74_01185"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HSF49347.1"
                     /translation="MVSIKKKKDNKGNVYYYIQQTIRKGKRVEYKEKYLGKHIPKNIE
                     ELKIKLFRESYKELYNSIDSIKNNYNKELKIIPKSIKEKSLELFVTRFTYDTQRIEGS
                     TLSLRDTANLLEKGITPKDKPIVDIKEAEGHKKLFHKILDYQKDLSYSIIVEWHTLLF
                     KETKQDIAGKIRKHKVGISGSKFIPPLPIEIYPLLKEFFKWYNKNKEEKLHPVELAAL
                     VHLKFVTIHPFSDGNGRISRLMMNFVLNKKRYPMFNIPYEGRNSYYNALERSQIKGEW
                     NHFLLWFIKNYIKGNK"
     gene            2437..3216
                     /locus_tag="VLA74_01190"
     CDS             2437..3216
                     /locus_tag="VLA74_01190"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49348.1"
                     /translation="MNYDDKAPAPEEIRNGGLALATKLCLEKKYTEAKKVLSEILKVC
                     INDSETMVMIVEILIAENKLTQAKKWLDNILALYPNNPDALYNLGVFYTNKKQWKKAI
                     KAYEKSITLYDDKDSKKITEIADAYQNLGCVLWEDSRREEALEAWKTSLKYNPKQKQA
                     KKNLKEFTNEYGLPSSPVGTLMDDVQAFVSIKMEEYLLTKNKTGESTIDNGNLTELNK
                     TLENIMQAWNDEISAKYAEELDSMDTNKKVNLFKRTKVSFD"
     gene            3479..4120
                     /locus_tag="VLA74_01195"
     CDS             3479..4120
                     /locus_tag="VLA74_01195"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HSF49349.1"
                     /translation="MESSSTIQIPAWHLKADYVETCNCDYGCPCNFDAFPTYGFCRAL
                     VLYHIREGNYGDIKLDGLDVVGAYSWPKAIHEGNGTMQLYITKKALEDNNVKHAIVDV
                     FSGKAKGEGPFALFAGTFKYFLEPQFVDINVKIDGKKSSFSVPDIMDVQVESFINPVT
                     GEEQDTKIQLPKGFIWKIAEAAKTRIMRITTPSLNFDDSGKNAFYSVVEYRGP"
     gene            4181..4987
                     /locus_tag="VLA74_01200"
     CDS             4181..4987
                     /locus_tag="VLA74_01200"
                     /inference="COORDINATES: protein motif:HMM:NF021465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HSF49350.1"
                     /translation="MNKIQKFIILFILTTSGLAWIFSFTTTDIMMNTMMMVNYNLLSI
                     LLFTVIWTLGMIAMMFPAIIPSILLYNKIILQKDKSDTMLIAKENKVIYSLKTILFTA
                     TYIIVWTIVGLILFFGWSLSINNIVIKYFSNDQINMLLGIILIISGVYQFTSLKKKCI
                     GYYESPLAFFTRRWHNGTIGAIKMGTYHGLYCLGCCWPYFLLMVALGWMNIAWMGLFA
                     GIIFGEKIWSKGIWISRITGIAFAIVGILTILGIIPLYNDTMNMDTMNMS"
     gene            5157..5555
                     /locus_tag="VLA74_01205"
     CDS             5157..5555
                     /locus_tag="VLA74_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49351.1"
                     /translation="MSKKITLVYFSIVLLVAGISAILLGESGIGGGQQITYAQLTTST
                     EEYPEGHPLAPTQGYPEGTSETPPHLQTQDKPGTPHPPSSTQIPDEGFPEGTSETPSN
                     SQVPPFSPQAPSHSQVAPEAPQPPIHPQVP"
     gene            5643..5786
                     /locus_tag="VLA74_01210"
     CDS             5643..5786
                     /locus_tag="VLA74_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49352.1"
                     /translation="MNSNLKTKVFPYTLNGEDRNPVIIITAKNNVIVFVVEFALFNLL
                     KIK"
BASE COUNT         2470 a          859 c          994 g         2112 t
ORIGIN      
        1 cagtttacgg aatacttcca aggcattagt gatatttaga gatgagaaga gaagttatgt
       61 ttctgtttgg aattggatac aaagatttgg atcctgtcat atctataaca aaagaaaaag
      121 agtgtctgcc tttatcatag atgaaacagt tatacagatt ggaaatcaac acttttggtt
      181 atggatttgt attgaaccaa ttcatagttc agtgcttgga atatacatct cagaggagag
      241 aaatatgctt gttgctgaaa aattcattag atctcttgta tcaatatatg gtaaacatac
      301 agtttacaca gatggaggta catggtataa tgaagcatgt aatgtaattg gattaaaaca
      361 ttatttacat tcttcaatag agaaaagttt gatggaaaga gtaaaccagt attttaagga
      421 tataatagaa tgttttgatg actattatcc atgtagacaa atggaatgca atctatttca
      481 tgtatataac tggatacaat tctttgtatc tatgtataat gatacaacat ttgagaatta
      541 ttttattaac gaattgaata aaagaggtga atatgtctta aattaacagg gccgactaaa
      601 tagtattaaa atttcaaaac caaatttgaa ggaataaatt gttaactata tttaatcgaa
      661 ttttatttta gaagaataaa ttcttctctc tttttctctt tctttcactc tcttctgctg
      721 ctacttcttt ttctttcctt tcttctcctt ttctgactta ttgtcatcat tattatcatt
      781 ttatttgaac aacaaaatta agtagatgaa tccgagaaaa ctacgggccc gtcgggttgc
      841 gaggcatttt cgtctctttt tatctaatat actaatatat cagtttacaa tgtaatttct
      901 attaattatc gaagtttatc taaccaacat ctaggaatcg agttttctta ttgttaatat
      961 tttttataaa atacgaataa tgatttatta aaatgaccat taaaaaaaag aaaaattatt
     1021 gatattatta tcaatagaat tttcaatata gcaattgtaa tagcagagaa ttatataaga
     1081 atagtgggca attatgagta ttgtattatc acattacatg gcatttgtta caccaattta
     1141 cttgataaaa gtaatgagta ttataccaga tagatgcagt ataaacaaga tctataaaag
     1201 ataagaagag ggtgtataat acgcaacctg gtaggagaag tagaatgcac agtaatggat
     1261 atcttcaaat atatacacat attcttcaaa attattggaa gaggtcataa agagaaattt
     1321 aggtagaaat agatgaaccc gagaaaacta cgggcccgtc gggagtagag tcttccatgt
     1381 agtagggtcc tattacattg tatttagatt tttggtaaca ggaataataa ttctgaaatt
     1441 aggatttact cttacagttt tataccctta cattttaata gtattatata cttataccaa
     1501 tttgtaaggg tataagattt tcatggtatc cataaagaaa aagaaggata acaaaggtaa
     1561 tgtatactac tatatacaac aaacaataag aaaaggcaag agagtagaat ataaagaaaa
     1621 atatcttggt aagcacatac caaaaaatat agaggagtta aagatcaaac tatttagaga
     1681 atcttataaa gaactgtata attctattga ttccataaaa aacaattaca ataaagaatt
     1741 aaaaattata ccaaaatcta taaaggaaaa atcattagaa ttatttgtta cccgatttac
     1801 atatgatact cagagaattg aaggttctac attatcattg agagatactg caaatttgtt
     1861 ggaaaaggga ataactccaa aagataaacc aattgtagat attaaagaag ctgaaggaca
     1921 taaaaaatta tttcataaaa tattagatta tcaaaaagat ttgtcataca gtataattgt
     1981 agaatggcat accttactat ttaaagaaac taaacaagac atagctggaa agataagaaa
     2041 acacaaggta ggaatttcag gaagtaaatt tatcccacca ttaccaatag aaatctatcc
     2101 gctattgaaa gaatttttta aatggtataa taaaaataaa gaagaaaaat tacatccagt
     2161 tgaattagca gctcttgttc atctgaagtt tgtaacaatt catccattta gtgatggtaa
     2221 tggaagaata tcaaggttaa tgatgaattt tgttttaaac aaaaaacgat atcctatgtt
     2281 taatatacca tatgaaggaa gaaacagtta ctacaatgca ttagaaagat cacaaatcaa
     2341 aggtgaatgg aatcattttc tattatggtt tatcaaaaat tatatcaaag gtaataagta
     2401 actaaatgat tgtaaagagt attggtagca tgaattatga attatgatga taaagctcca
     2461 gcacctgagg aaatacgtaa tggcggatta gcattagcaa caaagttatg tttagaaaaa
     2521 aaatatactg aagcaaaaaa agttttatcg gaaattttga aagtatgtat caatgattca
     2581 gaaaccatgg taatgatagt agagattctt attgcagaaa ataaattaac ccaagctaaa
     2641 aaatggcttg ataacatcct tgcattgtat ccaaataatc ctgatgctct ttataatctt
     2701 ggagtttttt atactaataa aaaacagtgg aaaaaggcta tcaaggcata tgagaaatcc
     2761 attactcttt atgatgataa ggattcaaag aagataacag agatagccga tgcttatcaa
     2821 aatcttggtt gtgtcctttg ggaagatagc agaagagagg aagcattgga agcatggaaa
     2881 acatctttaa aatataatcc taaacaaaaa caagccaaga aaaaccttaa agaatttact
     2941 aacgaatatg gtctaccaag ttcaccagtg ggaaccttga tggatgatgt acaggctttt
     3001 gtcagtatca agatggaaga atatctactg acaaaaaata aaactggtga gtctactatc
     3061 gataacggca atttaacaga actaaataaa acactggaaa atatcatgca agcatggaat
     3121 gatgagatat ctgctaaata tgcagaagaa ttggatagta tggacacaaa taaaaaagta
     3181 aatttattta aaagaacaaa agtctccttt gattagatta gaatagaatt attgatataa
     3241 ctatgctaaa ttaaaccttt acaatatttt ttgaataatg taggtgaact ataaaaattt
     3301 attaatttgt tgggagtaat accgatatcg gtgcaaaaat gagtctatta tagatatatt
     3361 attagcttgt atttagcttt tattgttagt agattcatca tcaaatatag taatatctaa
     3421 tttatggttc atgtattgac agctattctt ttatacaaat aaagaaatag ttattgctat
     3481 ggaatcatca tctaccatac agattcccgc atggcattta aaagctgatt atgttgaaac
     3541 atgtaattgt gattatggct gtccatgtaa tttcgatgct tttcctacct atggcttttg
     3601 cagagcttta gtattatatc atataagaga aggaaattat ggagatataa aattagatgg
     3661 cttagacgta gttggtgcat attcttggcc taaagcaata cacgaaggaa atggtacaat
     3721 gcaactttat attactaaaa aagcattaga agataataat gtaaaacatg caatagttga
     3781 tgtattttca ggtaaagcaa aaggagaagg cccttttgct ctctttgcag ggacatttaa
     3841 atattttctt gaacctcaat ttgtagatat caatgtcaaa atagatggaa agaaaagtag
     3901 tttctctgtt cccgatataa tggatgtaca agtggaaagt tttataaatc ctgtaactgg
     3961 agaagagcag gatacaaaga tacagctacc aaaaggattc atttggaaga ttgcagaagc
     4021 agcaaaaaca aggataatgc gtatcactac tccaagttta aactttgatg attctggaaa
     4081 gaatgcattt tattcagttg tagagtatag aggaccataa cataacaata ataaaaaaag
     4141 tacaagtaaa aaatattcat tattttattt tttattatct atgaataaaa ttcaaaaatt
     4201 catcatttta tttattctta caacttctgg tttagcatgg attttttctt ttacaactac
     4261 tgacataatg atgaatacaa tgatgatggt aaattataat cttttgagca ttttattatt
     4321 tactgtaatt tggactttag gaatgattgc aatgatgttt cctgctataa taccatcgat
     4381 tcttctttac aataagatta tcctacaaaa agacaaatct gatactatgt taattgctaa
     4441 agaaaataaa gtcatttatt ctttaaagac gattttattt acagctacgt atatcatagt
     4501 ttggacaata gtaggactaa ttttgttctt tggatggtct ttgtctataa ataatattgt
     4561 tataaaatat ttttctaatg accaaatcaa tatgttatta ggtataattc taattatctc
     4621 aggagtatat caatttacat cattaaaaaa gaaatgcatt ggatattatg aatctccttt
     4681 agccttcttt acaagaagat ggcataatgg aacaatagga gcaataaaaa tgggaacata
     4741 tcatggatta tattgcctag gatgttgttg gccttatttt ctattaatgg tagcattagg
     4801 atggatgaat atagcatgga tgggcttatt tgctggaata atatttggag aaaaaatatg
     4861 gtcaaaagga atatggattt caagaattac aggaattgct tttgctattg taggaattct
     4921 aacgatatta ggaataattc cattgtataa tgatactatg aatatggata ctatgaatat
     4981 gagttagcaa attcatttta tataacatta aatgattcta caatatatca aaattaatac
     5041 cgatagcggt gcaaaaataa gagtctattt tatagtttgc tttcattgat gattgtatat
     5101 aataaattaa agattgcata aaattatttt atattattta tatcatatac tatattatgt
     5161 caaaaaagat aacattggta tattttagta ttgtattatt ggttgcaggt atttctgcta
     5221 ttttacttgg agagagtggt attggtggtg gtcaacaaat tacatatgct caattaacta
     5281 catctacaga ggaatatccc gaaggacatc cactagcacc aactcaagga tatcctgaag
     5341 gaacctcaga aacaccacct catttacaaa cacaggacaa acctggaaca ccccatccgc
     5401 catcttccac acaaatacca gatgaaggat tccctgaagg aacctcagaa acaccatcta
     5461 actcacaagt accacctttc tcaccacaag ccccatctca ttcacaagta gcacctgaag
     5521 cgccccaacc cccaattcat ccacaagtac cctgaacaat cataaaccct atcttacacg
     5581 ctctacagat gtatcatctt cactagaaaa acctcggcat aatctcttat cttttatctt
     5641 gagtgaactc aaacctaaaa actaaagttt ttccatacac attaaatgga gaagatagaa
     5701 atcctgtgat tattataact gctaaaaata atgtaatagt ttttgttgta gaattcgctc
     5761 tattcaatct tttaaaaata aaataaaaat atatctgaaa tacgatagat gaataaagat
     5821 tctttcaaaa tatcattata taaactttac aatatttcat tctatttctt gaaatttttc
     5881 tattgaaata atctatttct aatactaaaa tattttagta aaattctagt ataactccac
     5941 gagtagaacg cgtggagtgg gattcgaacc cttctataaa gtgggaccag ttattgttta
     6001 atttcaatac agcaatttaa caataattgt aaaaaatttg agaagaggaa aaaaatagaa
     6061 ttgtaccttg ataggatata agacaatgaa gaaaacactt aattaataca tgtccatcaa
     6121 taagatcatt ctataaagaa caaattcata ataacattat agatcacgag attattcaca
     6181 agatgtaaaa agcagaaaaa tagaaaaacc ttggtattat accattaaca aatagtatta
     6241 ggataattta aggtagctcc aaatattcac tttttcttat caagatttta tttcaagttc
     6301 ctctcattta gaaaaaaacc tataaatctc gcttctttaa tatgaaattt gttattcctg
     6361 cctttatttt tcttacttgc atttgttatt aacattaatt taataaaatg atccttcttt
     6421 ttaagaaaat taaat
//
LOCUS       DATIAS010000061         2280 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_421250, whole genome shotgun sequence.
ACCESSION   DATIAS010000061 DATIAS010000000
VERSION     DATIAS010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421250"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(667..1422)
                     /locus_tag="VLA74_01215"
     CDS             complement(667..1422)
                     /locus_tag="VLA74_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49353.1"
                     /translation="MFHLKKEFTKSNLVLYLSFILVTWSLLQVSLTDFFENNDNILIK
                     IPSIYAQDDDGGNGNGGKAVNGNGNSDSGDSNGEVSDDNGDSDLEELSQEEDTQDVGQ
                     EVGLEELTLSEAARSEILTLIQQDADDVFEELTLEDSQDEDVDVSRFGGGGPSGTSIT
                     LQLPPGDQLQLSLPVSLPLPPAGPLPPGGLPPIPGSPLPPGSPIPPGGGPTPPKDLPP
                     LLGDLPSHVGQYDDDDDEKEEDDKDDKDDKDNN"
     gene            complement(2091..>2280)
                     /locus_tag="VLA74_01220"
     CDS             complement(2091..>2280)
                     /locus_tag="VLA74_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49354.1"
                     /translation="FNFLKKKDHFIKLMLITNASKKNKGRNNKFHIKEARFIGFFLNE
                     RNLRNKILIRKSEYLELP"
BASE COUNT          781 a          367 c          326 g          806 t
ORIGIN      
        1 tggaccaaat ttactggaaa accttgaatg atcccttaat atcttttcaa tatcattata
       61 acgatatact ccccatcgtt cattttcttc atcaaaaaca ataggattat tttttctcat
      121 tgatgaataa aaatcaaaag gtgaaaacct ttgttcaatt ggaggatata tctccatata
      181 ttttctagtt gcaaagatta tttatgtatt tatttatttt gacaattttg agctacacct
      241 ttttaattgt ctataggaaa tacaattcca aggtaaactg aatatggttt tggtccataa
      301 attgcagcaa tatatccagt aagaaaaccc actaaagcaa cttatacaca accagcaaat
      361 tcatcaagcc ctgcaaccat ttcctcatgg attgatttaa gatggcatgg tggtaaatcc
      421 taattagtga caaaaagaat taaccattca atacaataat atcctattaa ctataactta
      481 agatttttta taattattat ataggctata ttttttgata gcagatctta aaatataaaa
      541 aagaaatata attctaattg ataatagtca taattaatga ctttttcctt tcggattctc
      601 aaatagcaaa agaataaaaa gattgactta ttttcaacat ataattgaag cagtgaaaaa
      661 ggattactaa ttgttgtctt tgtcatcttt gtcatctttg tcatcttctt ctttctcatc
      721 gtcatcatcg tcatattggc caacatgtga tggtaaatct ccaagtaatg gtggtaggtc
      781 tttaggtggt gttgggcctc ctccaggagg tattgggctg ccaggtggta gtgggcttcc
      841 aggtattggt ggtagacctc caggtggtaa tgggcctgca ggtggtagtg gtaggcttac
      901 aggtagtgat agttgcagtt ggtctccagg tggtagttgt aaagtaatgc tagtaccaga
      961 aggaccaccg ccaccgaatc tagaaacatc tacatcttcg tcttgactat cttctagagt
     1021 tagttcttca aaaacatcat cagcatcttg ttgtatcaga gttagtatct cagaacgagc
     1081 agcttcgctt aaagttagtt cttcaagacc aacttcttgt ccaacatctt gagtatcttc
     1141 ttcttgactt agttcttcta aatcactgtc tccattgtca tcagaaactt cgccattact
     1201 atctccactg tcactgtttc cattaccatt tactgccttt ccgccattac cgtttccacc
     1261 atcatcatct tgggcataaa ttgaaggaat tttaataagg atattatcat tattttcaaa
     1321 aaagtctgtt aatgatacct gaagtaaaga ccatgtaact aaaataaaac taagatacaa
     1381 aactaaatta gatttagtaa attctttttt taagtgaaac acagtatcat aatatttttt
     1441 gatgattgca taaaaagttt tttaatttaa agaaaagtca cctaaaagat tagttaaata
     1501 aattatatta tatgatttac tttctaactg ttgttgtata tattctttca cttaaaacta
     1561 ataactgatc agataaatga gccaaagtat cgtccatctt catttacctt gagtctatat
     1621 tcataagaag gatccatata ccgctaggtt catatctgct tggtcctatt tatgaaaagg
     1681 attcaatatt tttcaaataa tattattaaa tatgttacta atttttttat atactacaga
     1741 gtaaatggga ccagctaatc tcaaaggggt tcagtactct tattcagcta aatatgtggg
     1801 atttgaaccc ttctataaag tgggaccagt tattgtttaa tttcaataca gcaatttaac
     1861 aataattgta aaaaaattta tatgagaaga ggaaaaaaat agaattgtac cttgatagga
     1921 tataaggcaa tgaagaaaac acttaattaa tacatgtcca tcaataagat cattctataa
     1981 agaacaaatt cataataaca ttatagatca cagattattc acaagatgta aaaaacagaa
     2041 aaatagaaaa accttggtat tataccatta acaaatagta ttaggataat ttaaggtagc
     2101 tccaaatatt cactttttct tatcaagatt ttatttctta agttcctctc atttagaaaa
     2161 aaacctataa atctcgcttc tttaatatga aatttgttat tcctgccttt atttttctta
     2221 cttgcatttg ttattaacat taatttaata aaatgatcct tctttttaag aaaattaaat
//
LOCUS       DATIAS010000062         2644 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_421591, whole genome shotgun sequence.
ACCESSION   DATIAS010000062 DATIAS010000000
VERSION     DATIAS010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421591"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1263
                     /locus_tag="VLA74_01225"
     CDS             <1..1263
                     /locus_tag="VLA74_01225"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF49355.1"
                     /translation="IMYLEGFIILFSTNFVVPTYLASSQSFIQDFAIIMIVAAIVLLV
                     TYRLKQPMVIGYILVGIIIGPHTPPFSYITDIETINAIAELGIIMLLFVIGTEFPISK
                     LKSVGKISAIVALSETLGTLVISFFVAQTLNFSYYDSLFIALAMSITSTVITIRVLQE
                     LNMVNDKSTTLLLGISIVEDILAITILGILQSVAIQDIGIGIGSGEGGGEVNILTIVV
                     SLVIVGLFIGGILIFGSRYLTPLINKIGKTNNYTLFLLSILGLGFGLAVSAQLLGLST
                     ATGAFLAEVLVAESKHSSLARVITIPLRDLFAAVFFISVGMLMEISAIGTIIVPALIL
                     IMTSFVSKLFIVTGILIKTKYSNITALRTGLGMAMAKGELSLVVVKTGYDSGITASFL
                     LPLVGVVAMITTFVTPYVIKFGKQLGKT"
     gene            1781..2284
                     /locus_tag="VLA74_01230"
     CDS             1781..2284
                     /locus_tag="VLA74_01230"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF49356.1"
                     /translation="MITYNKILVPYDNSKLSDTVLEHAMTIAKMSSISSSSDQIVNVT
                     LFYVTPIIHTPFTIGTISLKSNKTGETITLREYIKELHQEIKENAIKMLNDKIKKYEN
                     VENVSLQSKVIIGEPAYEIIKFANNEKTDLIIMGTTGLGGIKKFVFGSVARNVSEKAP
                     CPVMLVR"
BASE COUNT          983 a          339 c          386 g          936 t
ORIGIN      
        1 ataatgtact tggaaggatt tattatcttg ttttcaacaa attttgtagt tcctacatat
       61 cttgcatcat cacaatcctt tattcaagat tttgcaataa ttatgattgt tgctgcaatt
      121 gtacttcttg ttacttatag attaaagcaa cctatggtta taggctatat cttggtagga
      181 attattattg gacctcatac tcctcctttt agttacataa ctgatataga gacaattaat
      241 gcaattgcag aactaggaat cattatgtta ctttttgtta tagggactga atttccaata
      301 tcaaaactta aatcagtagg taaaatatct gcaatagtag cattatcaga gacattagga
      361 actcttgtta tatcattttt tgtagcgcag actttgaatt tttcttatta tgattcttta
      421 tttattgcac ttgcaatgtc aattaccagc acagtaataa caataagagt attgcaagaa
      481 ctaaacatgg taaatgacaa gtctactact ttactattgg gaatatctat agttgaagat
      541 atacttgcta taactattct tggaatttta cagtcagtgg ctatacaaga tattggtatt
      601 ggtattggta gtggtgaagg tggtggcgag gtaaatattt tgacaatagt agtatcactt
      661 gtaatagtag gtttatttat aggaggtatt ctgatatttg gttcaaggta tcttactcct
      721 cttataaata aaattggaaa aacaaataat tatacattat ttttactctc gatattagga
      781 ctaggttttg gtctagcagt ttctgctcaa ttattaggat tatccactgc tacaggtgct
      841 ttcttggctg aagtgctagt tgctgaatca aaacattctt cacttgctag agtaattact
      901 attcccttac gggatttatt tgctgcagta ttttttatat ctgttggaat gttaatggaa
      961 atttctgcta taggaactat tattgtacct gcattaatac ttattatgac atcttttgta
     1021 tctaaattat ttatagtaac tgggattttg attaaaacaa aatatagcaa tatcactgca
     1081 ttgagaacag gattaggaat ggcaatggct aaaggtgaac tatctttagt tgtagtaaaa
     1141 acaggatatg actctggaat aactgcatct tttttattac ctttagtagg tgttgtagcc
     1201 atgattacaa catttgtaac accatatgtt atcaaattcg gaaagcaatt aggaaaaaca
     1261 taataaaata tttacaatct ttatatgatg gattaaactc ttacaaaata tttatttcat
     1321 ttaagaaatg taattctcaa tcgatattga taatacaata tttttacctt tttagtttat
     1381 actgtttttt atagtaaaaa ttatacaaaa atttattgca ttaagttgca aaaactatta
     1441 taatggtaat ataagtgcca taaatttcaa aagaagattt ggtcgggata ataacaatat
     1501 tagaaaatta tcatccttta cagaattttg gaaaaattgg cattattgtt gatatcgggg
     1561 ctgtgattat tttattataa tgtcggcaac aggaaatata atgtaaatat aaaaaataat
     1621 aatagaagtt aaaagtacta taactttatc cctttttact tttactataa ttatagatgt
     1681 attgtaaaat aaataaaata aaatgaatat taaggaatca tttattagtt atgataaagg
     1741 taatattctt tttatgtaaa tatatacata acaataacga atgataacat ataataaaat
     1801 attagttcca tatgataatt caaaactatc tgatactgta ttagaacatg ctatgacaat
     1861 tgcgaaaatg tcatcaattt cttcttcttc tgatcagatt gtaaatgtta cgttatttta
     1921 tgtaactcca ataatacaca ctccatttac tataggaact atctcattaa aatcaaataa
     1981 aacaggtgaa actattacac tacgtgaata tataaaagaa ttacatcaag aaataaaaga
     2041 aaatgcaata aaaatgctta atgataaaat caaaaaatat gaaaatgttg aaaatgtatc
     2101 tttacaatca aaagttataa ttggcgagcc tgcatatgaa ataataaaat ttgctaataa
     2161 tgaaaaaaca gacttaatta tcatgggaac taccggactt ggtggcatta aaaagtttgt
     2221 atttggaagt gttgctagaa atgtgtctga aaaagcacct tgtccggtaa tgctggttag
     2281 ataatgatta aatataagtt ataaaattac attctaatta cttaggtttg gcataatcca
     2341 gttttaggat ctaaacaaaa aactaaggaa tacatctaga gaaataaagc attaacaaaa
     2401 atagatatct ttagactatt gcttaataat ataagatgct agttaataga atatccaaca
     2461 aaatccataa catgtgatta ttacaatgat aacaacgtca taagcattaa tataactgaa
     2521 ccaagagcaa cagttaaaat cataaaagga aatcctattt tgaaccaatg aataaaactt
     2581 attttatgcc catattttag agaaatacct acagccacta cccctgcact tgaaccaatt
     2641 aaag
//
LOCUS       DATIAS010000063         2054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1784174, whole genome shotgun sequence.
ACCESSION   DATIAS010000063 DATIAS010000000
VERSION     DATIAS010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784174"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VLA74_01235"
     CDS             <1..474
                     /locus_tag="VLA74_01235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49357.1"
                     /translation="IPIYTSPTQHPGNSTIRDIYHPLFDKFGVDLVFSSDNHNYQRTF
                     PINFNGNGDSSDNPIITNTDSTSYNIDSGVIYLIVGTGGRSLYEIEEQAPFVANQYDK
                     QFGFLNIDIYADKALRGTFYINEDNNPKYYPISNTNDNIADHFIISDMKVSGVIS"
     gene            complement(510..1055)
                     /locus_tag="VLA74_01240"
     CDS             complement(510..1055)
                     /locus_tag="VLA74_01240"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49358.1"
                     /translation="MLDNLSQKKKEFTVVSTDESFFFYDYLVRKVWIVKKERPVVKIT
                     GSHQESVLFGATSLEGKQLFRQYDWFDENTFLDYLKQIHRKFPKCYLFLDKAKQHYKS
                     KKVLEYFDKHKKDLIPIYLPTASPEFMVLEEIWHIAKNDLLVLQHYSSFTDFKKKISS
                     YFRTKRFNLDMRNYLLAKIDN"
     gene            complement(1013..1519)
                     /locus_tag="VLA74_01245"
     CDS             complement(1013..1519)
                     /locus_tag="VLA74_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49359.1"
                     /translation="MNSKNELIRLYKKETNPKVKERLLFVIKVKYDNIIPAYASDELH
                     RSRPWGLYWLDRFSQEGVAGLKNKPKSGRHPDISEETVHEIKNELASNKHGWTTRQVE
                     DLIIRKSGGIRYHYTHIYRLMHKWGFKEKVPKKTHMNTASKGEKERFKKQPERFWTIS
                     HKRRKSLQ"
     gene            complement(1829..>2054)
                     /locus_tag="VLA74_01250"
     CDS             complement(1829..>2054)
                     /locus_tag="VLA74_01250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49360.1"
                     /translation="LKLLIKEKYLPILLIILLFLNINILSYNHIVLGKETDNDDVNNR
                     DSREEDVIIEKDEEEDDVPFILPFNAVPFP"
BASE COUNT          663 a          302 c          282 g          807 t
ORIGIN      
        1 atacctatct atacttctcc tacacaacat cctggtaatt ctacaatcag agatatttat
       61 catcctcttt ttgataagtt tggtgttgat ttggtattta gtagcgacaa tcataattat
      121 cagaggactt ttccaataaa ctttaatggc aatggtgata gttctgataa tcctatcata
      181 acaaatacag attcaactag ttataatatt gatagtggag taatttattt aatagttggc
      241 actgggggta gatctcttta tgagatagaa gaacaagcac cttttgttgc caatcaatat
      301 gataaacaat ttggttttct gaatattgat atttatgctg ataaagcctt gcggggaact
      361 ttttatatca atgaggataa taatcctaaa tactatccta tcagtaatac aaatgacaat
      421 atagctgatc attttataat ttcagatatg aaagtatcag gagtaataag ttagttaacc
      481 agaatattat accaaatagc ttatgttttc taattgtcaa ttttagcaag cagatagttt
      541 ctcatatcaa gattgaatct ttttgttcta aaatatgagg atattttctt tttaaaatct
      601 gtaaatgatg aataatgttg taggactaga agatcatttt tggctatatg ccatatctct
      661 tccaatacca taaattctgg agatgctgtt ggaagatata ttggaatcaa atcttttttg
      721 tgtttatcaa aatattctag tacctttttt gatttataat gctgttttgc tttatccagg
      781 aagagataac attttggaaa tttcctatgt atttgcttca gataatccag aaatgtgttt
      841 tcatcaaacc agtcatactg tctgaacaat tgttttcctt ctaaacttgt agcaccaaat
      901 agaactgatt cctgatggga tccagtaatt tttacgactg gtctttcctt ctttactatc
      961 catacttttc ttacaagata atcatagaag aagaatgatt cgtctgtaga tactactgta
     1021 aactctttct tcttttgtga gagattgtcc agaatctttc tggctgtttt ttaaaacgtt
     1081 ctttctctcc ttttgatgca gtattcatat gtgtcttttt gggtactttc tccttgaatc
     1141 cccacttatg catgagtctg tatatatggg tataatgata tcttattcca ccactttttc
     1201 tgataataag atcttctacc tgtcttgtag tccacccatg tttgttagat gctaattcat
     1261 tttttatttc atgtactgtc tcttctgata tatctggatg tctaccactt tttggcttat
     1321 tttttaatcc cgctactcct tcttgtgaga atctatccaa ccagtataat ccccatggtc
     1381 tacttctgtg tagttcatca gaagcataag caggaatgat attatcatat tttactttta
     1441 ttacaaaaag taatctttcc tttacctttg gattagtttc cttcttgtat agtctaatca
     1501 attcattttt tgaattcaca gttatgatat tgccaaataa acaagatagt agatagcttt
     1561 tactctatat cagataggat tataataaaa catgattaga aaatatatgc taattggtat
     1621 agtaaataac gataaactaa ataatttaaa aaatattttt aaaataatat tttataaatc
     1681 attaaataaa ggttaaaaac tgtatcgcaa attactaatt atctaggaga taactttagt
     1741 tactgataga tagtatcgta tatttacttt ttattagatt aaaatgataa attcattttt
     1801 agtataaatt attttaagaa taaaagtatc aaggaaatgg tacagcatta aaaggaagta
     1861 taaatggtac atcatcttct tcctcatctt tttctattat aacatcttct tctctactat
     1921 ctctattatt aacatcatca ttatcagttt cttttcctag gacaatatga ttataagata
     1981 aaatattgat atttaagaat agtaaaataa ttagtaaaat tggaaggtat ttctctttta
     2041 taagcaattt aagt
//
LOCUS       DATIAS010000064         2511 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_149578, whole genome shotgun sequence.
ACCESSION   DATIAS010000064 DATIAS010000000
VERSION     DATIAS010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149578"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VLA74_01255"
     CDS             <1..682
                     /locus_tag="VLA74_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49361.1"
                     /translation="FGVVFLGGDTNESMELVIDCILVGFLDSTTNNIPLRNNAKAGDI
                     VITSGEFGYTSSGLKILLLNSKAISSFKKLAVTSILLPKPNQKFGTLLGQYFSSSIDS
                     SDGLGISLYELAKQSKVNFYIDDIPIPIGLIDFAKTNSLNIYDLIFNGGEEYEILATV
                     NPSNFQKVKFLCKKFHLPMFVIGKVMTGNGDVFVKCNNKFRLLHERTRKENKDYFLLK
                     NKGFLHFT"
     gene            729..1136
                     /locus_tag="VLA74_01260"
     CDS             729..1136
                     /locus_tag="VLA74_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HSF49362.1"
                     /translation="MSETEDITQYKWGVAHIFSSYNNTLVHITDISGAETISFSSGGR
                     HVTADRYESSPYAAMKSAVSAADIAKSKGINALHIRVRAVGGVGPRIPGPGAQAAIRA
                     LARAGFRIGRIDDVTPVPHDTTRKPGGRRGRRV"
     gene            complement(1306..1710)
                     /locus_tag="VLA74_01265"
     CDS             complement(1306..1710)
                     /locus_tag="VLA74_01265"
                     /inference="COORDINATES: protein motif:HMM:NF014086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HSF49363.1"
                     /translation="MEEDSDIEILKAKKMQEMMKRMIKQKKENMKKVIRKHEPSEKEI
                     LLSYLYDRGDEVLNLAESQFPTETKAITNKIVELINIGEINRKISGGELLSLFRSLGL
                     NVKINTTIKIEEHGKYVSFAEKLKQNKENDDK"
     gene            complement(1712..>2511)
                     /locus_tag="VLA74_01270"
     CDS             complement(1712..>2511)
                     /locus_tag="VLA74_01270"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HSF49364.1"
                     /translation="NAAKVMELEKGHITVLIHCGSRGFGHQVCSDYLRYSEQSLKKYN
                     IDLIDRELACVPNNSIEGENYRKAMNTALNFAWSNRQIITHFTRKTFEKVFSLSETGL
                     DMKLVYDVAHNIAKVERHEIDGEGMRELMVHRKGATRAFPAGMKEVSQKYRQIGQPVF
                     IPGSMGTASWILMGNKKSLDLSFGSTAHGAGRTMSRGAAKRSSTVEKVKDELESKGIY
                     IKALTKNGIVEETPLAYKDVDSVVNVSDKLGIATKVAKLVPIGVIKG"
BASE COUNT          791 a          391 c          357 g          972 t
ORIGIN      
        1 atttggtgta gtttttcttg gtggtgatac caatgaatct atggaattag taattgattg
       61 tattttagtt ggttttttag attctacaac taacaatatt cctttaagaa ataatgctaa
      121 agctggcgat attgtaataa catcaggaga atttggttat acctcttctg ggttaaaaat
      181 actgcttctc aattcaaaag caatatcttc ttttaaaaaa ctggctgtaa caagtatctt
      241 gcttccaaaa cctaatcaaa aatttggaac attattggga cagtattttt catcatcaat
      301 tgattctagt gatggattag ggatatctct ttatgaattg gccaagcaaa gtaaagttaa
      361 tttttatatt gatgatattc caattcctat cggtctcatt gatttcgcaa aaactaattc
      421 tctaaatatt tatgatctaa tatttaatgg gggagaagaa tatgaaatat tagctacagt
      481 taatccttct aattttcaaa aagtaaaatt tctttgcaag aaatttcatt tgccaatgtt
      541 tgtaatagga aaagtgatga ctggtaatgg tgatgttttt gttaaatgca ataataaatt
      601 tagattatta catgaaagaa cacggaaaga aaataaagat tattttctat taaaaaataa
      661 gggattttta cattttactt aatatattaa aaaagtttta atatctaaat taagtgaatt
      721 ataggattat gtctgaaact gaagatatta ctcaatataa atggggtgta gctcatattt
      781 ttagcagtta taataacact ttagttcata ttactgatat tagtggtgct gaaacaatat
      841 catttagttc tggaggtcga catgtaactg ctgatagata tgaatcatcg ccttatgcag
      901 caatgaaatc tgccgtatct gcagcagata tagcaaaatc taagggaata aatgctcttc
      961 atattagagt tcgtgctgtt gggggagtag gacctagaat ccctggtcca ggagctcaag
     1021 ctgcaataag agctttagct agagcaggtt ttagaattgg aagaattgat gatgttactc
     1081 cagttcctca tgatacaacc agaaagcctg gtggtagaag gggaagaaga gtctaacatt
     1141 acaatacttt ttactatttt ttaagtctaa tagaatttta aaaatttaga atttaatatt
     1201 ttagaaaata tattgacaat gatataaaaa taatcactct atcctttatc ttttattaat
     1261 aatatacaaa aataattaaa aaaatttact taaaaatgtc tttttttatt tatcatcatt
     1321 ttctttattt tgcttaagtt tctctgcaaa tgatacatat tttccatgct cttcaatttt
     1381 gatagtagta tttattttaa cattcaatcc taatgaacga aataatgata gtaattctcc
     1441 tccagaaatt tttcggttta tttctccaat attaataagt tctactattt tatttgttat
     1501 tgctttagtt tctgttggaa attgggattc tgctaagttt aatacttcat ctcctctatc
     1561 atataaatat gatagtaaaa tctccttctc agagggctca tgttttctaa taactttttt
     1621 catattttcc tttttctgtt ttatcatacg tttcatcatt tcttgcattt tcttagcttt
     1681 aagaatttca atatctgaat cttcctccat tttatccttt aatcactcct ataggaacta
     1741 attttgctac tttagttgca attcccaatt tatctgatac atttacaacg gagtctacat
     1801 ctttataagc tagaggtgtt tcctctacta ttccattttt tgttagtgct tttatataaa
     1861 tcccttttga ttcaagttcg tcttttactt tttcaacagt agaacttctt ttagctgcac
     1921 ctcttgacat agttcttcca gctccatgtg cagttgatcc aaaacttaaa tcaagagact
     1981 ttttgttacc cattagtatc caactagctg ttcccattga accaggtata aatacaggtt
     2041 gaccaatttg tcgatatttt tgtgagacct ctttcattcc tgctggaaaa gctctggtag
     2101 ctccttttct atgaaccatt aattctctca ttccttctcc atcaatctca tgacgttcta
     2161 ctttggctat attatgtgct acatcataaa ccaatttcat atctaatcca gtttctgaga
     2221 gtgaaaagac tttttcaaat gtttttctag taaaatgagt aattatttgt ctatttgacc
     2281 aggcaaaatt caaagctgta ttcatagctt ttctataatt ttctccttcg attgaattat
     2341 ttggaacaca ggctagttct ctatcaatta aatcaatatt gtattttttt aaagattgtt
     2401 cggaataacg taaataatca ctacaaacct gatgaccaaa tcctcgtgat ccacaatgta
     2461 ttaatactgt tatgtgacct ttttctagct ccatcacttt tgccgcattt t
//
LOCUS       DATIAS010000065         2670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1784956, whole genome shotgun sequence.
ACCESSION   DATIAS010000065 DATIAS010000000
VERSION     DATIAS010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784956"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1022
                     /gene="argH"
                     /locus_tag="VLA74_01275"
     CDS             <1..1022
                     /gene="argH"
                     /locus_tag="VLA74_01275"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HSF49365.1"
                     /translation="IGTFSHYLLSYSYSLLRDLERFNMIFDRINKSPLGACAIGGTNI
                     PIDRKYTASLLGFDGLVENSIDATSSRDVIIEFLSSQTILMNSLSRIAEDFILWSTSE
                     FNYIELADKYSSTSSVMPQKKNPDPLEILRSHSSIVTGNLLSALTIIKSLPTGYSRDL
                     QDLKPLLWKSTAIVTNSLIIMVGIIDTFKVNKNIALKQANKSYAVSLDIAEQLVIKYN
                     IPFRQAHKLVGRLVQYAIKNNHSISLKDITKEELSRILDSINMHIDTYDLHRIIRDTT
                     SENSIYLRKSAGSPNPNEQKKMLESIENLLIDTENILSKRITMVDQAFKNLQQLVIEK
                     CKFDK"
     gene            complement(1147..1247)
                     /locus_tag="VLA74_01280"
     tRNA            complement(join(1147..1209,1238..1247))
                     /locus_tag="VLA74_01280"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1183..1185),aa:Gln,seq:ttg)
     gene            complement(1296..2450)
                     /locus_tag="VLA74_01285"
     CDS             complement(1296..2450)
                     /locus_tag="VLA74_01285"
                     /inference="COORDINATES: protein motif:HMM:NF015940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF354 domain-containing protein"
                     /protein_id="HSF49366.1"
                     /translation="MISKGIYHNNLRIWFDILTPKQVMFFKYFVEDLEESGHEIFCTG
                     RNYREAIELAKIKKLRIKIVGKHGGNDRYEKLVASSERIRKLADIVNSFEPDLTVSFS
                     SPEASRVSFGLGVKHYIFNDSPHALAVAKLSVPICDRLFCPWIIPYKAWLHLGINREK
                     ITRYRAIDPVVWVKKEMEKIKECRGWTTTRSKKTKKNQFTILIRPEEAKASYIIDNKN
                     LKNSLALIDSIVKNFSLYSQVLILGRYQDQIDFFKRRYEKNVQILENVVDGISLLRKI
                     DLFIGAGGTMSAEAALLGKPVISIAPISFYVENFLIRCGFVKKIRNEKDLTSYTHKIF
                     SKIKNEKKDFKNNDTLKKYKVLGFQKRLFEKSLKFIDSMEDPIVQFKKFI"
BASE COUNT          871 a          451 c          405 g          943 t
ORIGIN      
        1 aaataggcac gttttctcac tatctactat catattctta cagtctgtta agagatcttg
       61 aacgctttaa tatgatcttt gataggataa ataaatctcc tttgggtgca tgtgcaatcg
      121 gtggtactaa tatacccata gatagaaaat acaccgcttc tctgctagga tttgatggac
      181 tggtagaaaa ttccattgat gctactagtt ctagagatgt aattatcgaa tttttatctt
      241 cgcagacaat cttaatgaac tccttaagtc gaattgccga agattttatt ctctggtcta
      301 cttcagaatt taattatatc gaacttgcag acaaatatag ttcgacatcg agtgtaatgc
      361 cacaaaagaa aaatccagat cccttggaaa ttttacgttc acattcatct attgttactg
      421 gaaatcttct ttcagcattg acaataataa agagccttcc aactggttat agtagagacc
      481 tgcaggatct caaaccctta ttgtggaaat ctactgctat agtaacaaat tctctgataa
      541 taatggtagg gataatagat acatttaaag tgaataaaaa catcgcatta aagcaagcta
      601 ataagagcta tgcggtctct ttggatattg ctgaacagtt ggtgatcaaa tacaatatcc
      661 catttcgtca agctcacaaa ttggtaggac gtcttgtaca atatgcgata aaaaataacc
      721 atagtattag tttaaaggac attacaaagg aagaactttc aaggattctt gattctatta
      781 atatgcatat agatacatat gatttacata ggatcattag agacacaact tcagaaaatt
      841 ctatatactt aagaaaatca gcaggatctc cgaatccgaa tgaacagaaa aaaatgctgg
      901 aatcaataga aaatttactt atagatacag aaaatatctt atctaaaaga attactatgg
      961 tagatcaggc ttttaaaaat ctccaacaac ttgtaattga aaaatgtaaa tttgataaat
     1021 aatatttttt attaaaagtg tctttgaaat aagaaagaaa tatatttttt taggttttat
     1081 gaatattagg tcattcagat attagttcta aaaaacggaa acgttatttg taatacataa
     1141 aaaaagtagc ccggcccaga ttcgaactgg ggtcaaaggc tccaaaggcc tttatgcttg
     1201 gccgctacac tcggcgggaa aatatatttt tttccctcca ccgggcttcc gggcattatt
     1261 tcgtattaat aacttgaatt ataatgttat ggatttcaaa taaatttctt aaattgtact
     1321 attggatctt ccatgctatc tataaatttt aaagattttt caaacaatct tttttgaaat
     1381 cccaatactt tgtatttttt tagtgtatca ttatttttaa aatctttttt ctcattttta
     1441 attttagaga aaatcttgtg cgtataactg gttaagtctt tttcatttct tattttcttt
     1501 acaaatccgc atcttataag aaagttttcc acgtaaaagc taataggtgc aatggaaatg
     1561 actggtttac caagtaatgc tgcctcggcg ctcatagtac ctccagcacc aataaacaga
     1621 tctatctttc ttaataaaga gattccatcc actacatttt cgagtatttg aacattcttt
     1681 tcatatctcc gtttgaaaaa atctatttga tcttggtatc ttcccagaat caatacctga
     1741 gagtacaaag aaaaattttt aacaatacta tcaatcaatg ctaaggaatt tttcagattc
     1801 ttgttatcta ttatatatga tgcctttgct tcttccggcc taattaagat agtgaattgg
     1861 ttttttttag tttttttcga tcttgtagtt gtccatcctc tacattcttt aattttttcc
     1921 atctcttttt ttacccagac aacagggtca attgctctat atctagtaat tttttctcta
     1981 ttaattccta gatgtaacca tgccttatat ggtataatcc atggacagaa aagccggtca
     2041 caaattggca cacttagttt cgctacagcc aatgcatgtg gagaatcatt gaagatgtaa
     2101 tgttttacac ctaatccaaa tgacactctt gaagcttctg gggaggaaaa ggagacagtt
     2161 agatcaggtt caaaggaatt aactatgtct gcaagttttc gaattctttc actgctagct
     2221 actaattttt catacctgtc atttcctcca tgtttgccaa ctatttttat tcttaatttt
     2281 tttatttttg ctaactctat tgcctctcgg tagtttcgtc cagtacagaa tatttcatgt
     2341 ccagattctt ccagatcttc tacaaaatat ttgaagaaca ttacctgttt gggagtaaga
     2401 atatcgaacc agattctcaa gttattgtga tagataccct tacttatcaa tgaatacttt
     2461 tctcttgatc ttgagaataa gaggatgaat ctgaacgaaa aatattttat gcattcatcc
     2521 tctactataa aaaaattagg taaaaaaaat gaataacttt actaaggagg aaatttcata
     2581 ttttattgtc aaatttgccc tcgtccccag aattagctat atttggatta agtactgagg
     2641 gctataattt tgctacatca cttgtcagtg
//
LOCUS       DATIAS010000066         2120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_831255, whole genome shotgun sequence.
ACCESSION   DATIAS010000066 DATIAS010000000
VERSION     DATIAS010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831255"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            291..557
                     /locus_tag="VLA74_01290"
     CDS             291..557
                     /locus_tag="VLA74_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49367.1"
                     /translation="MNNSTFSNINNSTFSSNIDNTDANINKNHNKIFKQIWQLGNKHL
                     VIVDESIVRNLGITDSSTFFVEQELDQDNRTILMKLHNLGTVEK"
     gene            554..733
                     /locus_tag="VLA74_01295"
     CDS             554..733
                     /locus_tag="VLA74_01295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49368.1"
                     /translation="MKTKILKSISNNSNNLSHWPENPSFIFPDLCYCGHESSEHNLDN
                     NRCSNEFCKCRGFWP"
     gene            854..>2120
                     /locus_tag="VLA74_01300"
     CDS             854..>2120
                     /locus_tag="VLA74_01300"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HSF49369.1"
                     /translation="MDNANNLKSTYDYAIVYNAKGASVISLKPKSKQPSIPSWKPFTM
                     SKASKEQLENWFVNTDNNIGIITGRISSVFAIDIDGQETYNFFIQKIDSLSPEDEQLV
                     QSIKDTMKIKTGSGNTNLIFRFDPEEFPIGDELSNNILWKDSSANQQNNHSEIRLKGE
                     GGYIVVPPSIHENDKAYKLVNGINPILLTRSQIEKIIDLFSKNNDTSQDISQIIEILK
                     PHYNNGIRNDLVLYLSGWLRKLDVPFEIAEELIKELAKDDEEKGNRLRTLQETYKKQD
                     LDEIAGYSGLLKLLTYDCTEYEAKEKLTKINDIVNQKFGTNNDNKNEDEEGEEEEEQI
                     DITLLIKEYYVDLFVDQFNNPCIAIKINEHVEVLGIDGQRFKNWLYRFFYENFGKISS
                     EKIENTIKVLKAEAEFSENRKRLELRVAKA"
BASE COUNT          877 a          260 c          342 g          641 t
ORIGIN      
        1 atccaagtct taaataattt aaaattttac taataactta cattggagat ataaataata
       61 aaacaaaaag agaaatagta acaaaaaaac tgactacaat atctatatct aaggaaaatt
      121 attttattct aaagaaaatg ggttttgctg gtgagagttt caatgatgta ctaggtagga
      181 tcctaaaaaa taatgatagt gaattgttag agtctgattc tcgagtgggg actccataat
      241 catgactcta actattacta atacaccaca ttataatagg agtattcagt atgaataatt
      301 caacattctc aaatataaat aattctactt tctcttctaa tattgacaac actgatgcta
      361 atattaataa aaatcataat aaaatattca aacaaatatg gcaattagga aacaaacatc
      421 ttgttatagt tgatgaatcg atagtacgta accttggaat tacagacagt tcgacatttt
      481 ttgtagaaca ggaattggat caggataaca gaacaattct gatgaaactt cacaatttgg
      541 ggacagtaga gaaatgaaaa ctaaaatatt aaaatctatc tctaataaca gtaacaatct
      601 cagtcattgg ccagaaaatc cttcatttat atttcctgat ttatgttatt gtggacacga
      661 aagtagtgaa cataatcttg acaataatcg atgttccaat gagttctgta aatgtagggg
      721 attttggcca tgactttcta tattaattat ttagcaaaaa atgaaattaa cttgtcctat
      781 attcaattca ataaagtctc gatatttcaa tgtagaagtt gtattcctat aattagaaga
      841 ggttcagatt aaaatggata atgcaaataa tttaaaatca acatatgatt atgccatagt
      901 ttataatgca aagggtgcta gtgttatttc tctcaagcca aaaagtaaac agccttctat
      961 tcctagttgg aaaccattta caatgtcaaa agcttcaaaa gagcaattag agaattggtt
     1021 tgtaaataca gacaacaaca ttgggataat aacaggaaga atatcttctg tttttgctat
     1081 agatatagat ggtcaagaga catacaactt ttttattcaa aaaatagatt cattgtcacc
     1141 agaggatgaa caactagtac aatccattaa agacacaatg aaaataaaaa caggttctgg
     1201 taataccaat ttaatcttta gatttgatcc tgaagagttt cctattggtg atgaattatc
     1261 taataatata ttatggaaag attcatccgc taatcaacaa aataatcaca gtgaaattag
     1321 attaaaagga gaaggaggat atattgttgt tccgccatca atccacgaaa atgataaagc
     1381 atacaaatta gtaaatggca taaatccaat acttttaaca agaagtcaaa ttgaaaaaat
     1441 aatagattta ttttccaaaa ataatgatac ctcacaggat atttcacaaa taatagagat
     1501 cttaaaacct cattataata atggaattag aaatgatctt gttttatatc tttcaggttg
     1561 gctacgtaag ttagatgtac cctttgaaat tgcagaagag ttgataaaag aacttgctaa
     1621 agatgatgag gaaaaaggca atagacttag gactttacag gaaacataca agaaacaaga
     1681 tttagatgag attgcaggat attcaggatt attaaagtta ttaacttatg attgtactga
     1741 atatgaggca aaagagaaac taacaaaaat taatgatatc gtaaatcaaa aatttgggac
     1801 taataatgat aacaaaaatg aagacgaaga aggagaggaa gaagaagagc aaattgatat
     1861 tacattatta ataaaagaat attatgtaga cttatttgta gatcaattta acaacccatg
     1921 tattgcaata aaaataaatg aacatgtaga ggttctaggg attgatggtc aaagatttaa
     1981 aaattggtta tatagattct tttatgaaaa ttttggcaag ataagcagtg aaaaaatcga
     2041 gaatacaata aaagtattaa aagctgaagc agaatttagt gaaaatagaa aaagacttga
     2101 gttgagagta gcaaaagcag
//
LOCUS       DATIAS010000067         2969 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1239689, whole genome shotgun sequence.
ACCESSION   DATIAS010000067 DATIAS010000000
VERSION     DATIAS010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239689"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VLA74_01305"
     CDS             complement(<1..206)
                     /locus_tag="VLA74_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49370.1"
                     /translation="MSNRDIIPNDWYKRFFSGRSPFGGWNFDDMFREFDEMRKEMSRT
                     FSEQFKNIENRVPKNLIKEYETPEG"
     gene            complement(1298..1441)
                     /locus_tag="VLA74_01310"
     CDS             complement(1298..1441)
                     /locus_tag="VLA74_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49371.1"
                     /translation="MSSKIKIEQIKKEETERIKIVEEIYRKQMEQAVSSLTNNFGFRL
                     RID"
     gene            1662..1928
                     /locus_tag="VLA74_01315"
     CDS             1662..1928
                     /locus_tag="VLA74_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49372.1"
                     /translation="MSDRSVSVELPDEIWKIIDTQFKPLSEETDSEILSNIIKNHLAS
                     NGYYLDVDSLMHGIGLKEIVDVIDDKVMSLIDLLEKKGITTYQE"
     gene            2256..2549
                     /locus_tag="VLA74_01320"
     CDS             2256..2549
                     /locus_tag="VLA74_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49373.1"
                     /translation="MKSQRYRVSNDKVWKQMRQRIHDPYRYYKKGLKYGDYLLPSGYY
                     VSQKYGALHKCWIGFVIAKEKEEWDKIDLYAIRIQKLEKELGLEKTDFSDWGI"
     gene            complement(2812..2886)
                     /locus_tag="VLA74_01325"
     tRNA            complement(2812..2886)
                     /locus_tag="VLA74_01325"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2849..2851),aa:Val,seq:tac)
BASE COUNT         1063 a          399 c          430 g         1077 t
ORIGIN      
        1 ccttctggtg tttcatattc tttaattaga ttttttggaa ctctgttttc aatattttta
       61 aattgttctg aaaatgttcg actcatttct tttctcattt catcaaattc tctaaacata
      121 tcgtcaaagt tccatccgcc aaaaggactt cgtccactaa aaaatctttt ataccaatca
      181 tttggaatta tatctctatt actcattgta atattcatct gtatattgta atagatatta
      241 caatatataa actttattac ataattgagc aggttaaatg tctaatattc taaataaata
      301 tttgaatttg gtgacatatg ttatatggag cgctacctat gctagcctat ctaagaaact
      361 tatgaattag caaaaattag taggattact tcttttgtaa tctttcatga aacatcaata
      421 gattggtcaa aggttataga attctcttta ttattctcaa tctaagataa ctttatcaga
      481 tgtaataaaa ttttacaata ataggagaaa ggtttgaaaa gcttttaggc agaaagatga
      541 aaataatatt aaacatgatt taatagaaga attattacat gattataagt cgagtattaa
      601 gatacaaaga aaaaagttaa ccaagttaag aaattataaa aatgatgtta atgctgattc
      661 tgtgattaaa tctgaaattt caacctttaa acataaatcc ttgatgttta taataaatat
      721 gaatttttgt taaagcacat aggagaagac attacaataa ctcctgcgac tagtataaca
      781 gctaaaaaaa ttgcaatagt ttttttagtt gatgttgtta atttattatt caatatttgt
      841 tattaacata ttatatttat ctgaaatgcg aataatgaat aaagattctt tgaatataaa
      901 gttgtgatag tttgtttttt tataattatg tttagtagta ataaatctat gatttcttag
      961 agttttgtat agaacaatta ttacaagcca tgactctaac cactctttat ttatttattt
     1021 ttgcattcaa tgaagaatgg cagaagattg agtttgttag aattataaca taaaaggatt
     1081 tgtaaaaagt cttttcaatt ctgacaatac tactactttc aatgtgatag ggttgagaat
     1141 gctggtttac ttgcaataat acaactacaa aaaaggctat taaaggtagt aacgactgta
     1201 ccgaactcca attagcaatg ctaaaatagc aacaccagat cacacatttc taaaaaaagt
     1261 aatatctaga gagaaatcct tttgtcataa tgatttgcta atctattctc aatctaaagc
     1321 caaaattatt agtaagtgaa gacacagctt gttccatctg ttttctatag atctcttcta
     1381 ctattttgat cctttctgtt tcttcttttt ttatctgttc tatttttatt ttggatgaca
     1441 tatctagtag catcataata tgaagataag caaggttgaa gagctatatc ctttagtatc
     1501 tggactcttc catggttctt tttctatatt gtatttctcc cacacatctt ttttctatta
     1561 gttcaagtgc atctattctc tctaaatgct gctgatcttg aactcaaatt tattaataaa
     1621 ataatataag cactacaaca acaaaataat attgtagaac aatgagcgat agatcagtca
     1681 gtgtagaatt acctgatgaa atatggaaaa tcatagacac gcagttcaag cctttaagtg
     1741 aagaaactga ttctgaaatc ctttctaata tcattaagaa tcatttagct tcaaacggat
     1801 attatctaga tgttgatagt cttatgcatg gaattggact aaaagagatc gtggatgtca
     1861 ttgacgataa agtaatgtct ctaatagatc tattagaaaa aaaggggatt acaacttatc
     1921 aggaatgagc tcaaacaatg caagaaagaa taataaaaaa tactagatct ttttactaaa
     1981 aaaactatta aataaattaa attttttttc tttaacaaaa aataataatt gttattatga
     2041 cagtcacaac tgtctatagt attatgattt tttgtctcaa tactacttaa cataaaaaat
     2101 attgtaggga aaagttttta aaatatagta cctttatgtg ggacatatac aaagctatct
     2161 ttaaaaaact tttaaaacta aactaaattt taagttatta tcagtaaggg tttttttgtt
     2221 agcttattaa gcaatagatc taattgtttt atagattgaa atcacaaaga tatcgagtat
     2281 ccaatgataa agtctggaag caaatgcgtc aaagaattca tgatccttac cgatattaca
     2341 agaaaggctt aaaatatggt gattatttgc ttccgtcagg atactacgtt tcacagaagt
     2401 atggagctct tcataaatgt tggattggct ttgtcatcgc caaggaaaaa gaagaatggg
     2461 ataaaataga tctgtatgct ataagaatac aaaaactaga aaaagaatta ggcttagaaa
     2521 aaacagactt ttctgattgg gggatttaat aagaagaaaa ttgtttagac tattatgatg
     2581 attgtgatta gaatatatta tttgtttttt aataacaaat aggttctctg ttcttttcta
     2641 cttgagtact ccttttttct ttagcaagat gtacaactta ctataattag gatctgtttt
     2701 gatcttgtgt tggctcatag gtcctatttg tttattttct gcatttttaa gagaatagga
     2761 aactctagag ttaaagctcc ctgaatcatc taacttttct aaagactagc atggagggga
     2821 tgggattcga acccatgacc acctgcgtgt aaggcaggta tcctaaccag tctagacaac
     2881 ccctccgtta ctgatctgat tcagttataa ctaatatatt aattatgata aagctgttac
     2941 tttgttaata cttttattaa acaataata
//
LOCUS       DATIAS010000068        13075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_150505, whole genome shotgun sequence.
ACCESSION   DATIAS010000068 DATIAS010000000
VERSION     DATIAS010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 13075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13075
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150505"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            417..2666
                     /locus_tag="VLA74_01330"
     CDS             417..2666
                     /locus_tag="VLA74_01330"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HSF49374.1"
                     /translation="MSLEKFEAVVIGSGFGGTILTLSLANKFDADNSLNNTDKKVCLL
                     ERGQWWLSHEINYTPPSKRSPSHDTNTREFLDDDKRPYHFWPYPNTVRGNIEIASAAR
                     AISRTGLYDYRVLGNVHVIASSGVGGGSLVYSNVNLEPDPSVFVNWPTQTILDDPLDK
                     KFSYKEVYGNKASSYANNSLDFDKIIDIDAKNISYYDIARNFIGVNKITTNSSLAKNK
                     FEKTKVFQEAGQSLLDDGNTSIINVIDIAGKKNGDFDADLAITNVPAGTFDLDTSNIR
                     NSHPWISEINKYSSITQTNECQRQGRCNLGCIPDARHTLNRKLFNILHPQNGTPKPLE
                     VKELCEVYDIEFVNGEVYKISYFKYDKSTENREQKQILAKILVISAGSLGSTELLLKC
                     KELGHLQLSNMLGKRFYTNADLFAYMNLDKKRIDITRGPIITSYISFKNSDDSTYYTI
                     EDTTIPKIVAPLFAKILELNSNLQSVNLVNIVSFLASNLSLLPGINLSNLSNLLSLNP
                     LQSLTTLYTMIWNNNNIRNFLRQNLKNISPTGNSTRKFLEGLLDSITTDIKDKFASPE
                     ERMSKFFVFSCMGRGENSGNLKLKPNWQNMENTNDPGEKLSVDWSGKANNNLFANIMV
                     GVKQLAGKIEQGGNARVFTPLWDFNNPQKSTCVTLHPLGGCNMGEDMNNGVVDSYGQV
                     FWNDDSEDKTKVYPKLYVVDGSIIPEPLGVNPALTISALSFRAAKHILIGISEVPLSP
                     EQANEYLPK"
     gene            3503..5857
                     /locus_tag="VLA74_01335"
     CDS             3503..5857
                     /locus_tag="VLA74_01335"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSF49375.1"
                     /translation="MVIIEGYIRDVSNQPLSGIPIQAFQDRQLIGDLNLTLNPVITDN
                     NGYFKLIPTRDIEAVNSNVYLVVIDTEKKFVSMRDWKSRYKREKKEIIFNGVKARRWK
                     GNIIDNLDNIIEIIVIRDQIEVPNTYESVVIGSGFGGTIISLSIAKKYDEKNKKDAGK
                     RRVCILERGQWWISHEISQSLDQNSIESKSLRSYLIKNNMPFNTWAYPNDLKGMLTAI
                     GNSRAVNSVEGIYDYKKMKNVNIISGSGVGGGSLVYFNLTVKPDHNIYENWPTEHDGN
                     PSLDKYFPIAEDFLGVNTITTNSALSNPAFKLPKSKVFQDAAKRINNNSPQILNISNL
                     DAQLSITDISSDVFNPYIGRPNQDDITKYSSFLEKNICQRQGRCGLGCITEARHTLDK
                     QIVNAINTKKFPIDVHPLCEVLDIYETGEQDYKYAVKFLDYRYIIDNDDFSPTRELSE
                     EEKTSITKIIKTKQVILSAGTLGSTEILLKSKKLNLSDMLGKKFSTNGDFFGIINPTK
                     YNVDSARGPLLTSIALFKANNNFAFSIEDLGVPRMFADVCATIFDIMREQKGSIPLKS
                     FIPNKKFTALFTQMVLNNINFDNPETRNILSKLKGLDIPTLSTFLNIFSNLVNLFSKN
                     KLNRSPEERVSNILVLFGIGRDVNKESKLFWNDKDNRIDLDKEYNLDQEIYDKILNGM
                     KLFAREIGREGENSLIIPLWDNQSKTQISAHPIGGCPMSKDSSDGVVDSLGRVFRGKN
                     GNVIYPGLYVVDGSIIPTSLGVNPSLTISALAFRIASHIEQNLS"
     gene            6148..7716
                     /locus_tag="VLA74_01340"
     CDS             6148..7716
                     /locus_tag="VLA74_01340"
                     /inference="COORDINATES: protein motif:HMM:NF018905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HSF49376.1"
                     /translation="MSKDSGEWNVRYHSKIVGIHTALLKNGKIILFSYPSREEHDNNG
                     EDHPHSVFGSASHYGVYEIIDVDNWTGEEPKRIKKNVFCGGHCFLDNGDLFVSGGQYQ
                     TIHNPLLLIDPPSICTHLFSIHNNEWKLRKRSLLARWYPSCVSLFDGTILIISGSYGI
                     YGVKKVGPFNFVNNRLEIYNKEIGLQKIQKIPFGLGLYPFLYLLPNGQVFVHSDRTSR
                     IYDIKNNMWIKSESTNKILEIQTNYEYSRTNPVQGTSIILPFNNNNFTEAKIMLIGGG
                     GESDDPDIDTPATDTCEIITIRNNQDLKSEPPRWQYTTKMNFRRVMPDGVLLPNKKVL
                     VVNGTANGKSDAGKDPVLTAELYNPENESWTELNEMKVPRLYHANALLLPEGNVMTSG
                     TDKEWNEGKEHDEYRIEVFTPPYLIKNNISELIRPIIKNVKTELSYGKEILIESDQAE
                     EITSVTIIRPSSVTHSLNTDQRCIELKIIDTKKNELNVMMQNNSNIAPPGYYMLFILN
                     KNETPSKAKFIRLS"
     gene            8237..9217
                     /locus_tag="VLA74_01345"
     CDS             8237..9217
                     /locus_tag="VLA74_01345"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49377.1"
                     /translation="MIIPTTAIMLTTITTSNPVYGQQDKTSFNVTDLSNIQSIPAKKV
                     QVGDIEIAYKMLGKGDPILLFNGGSDIMDAWDPSFLGILSSNKTVIVFDSRGLGNTTM
                     GSKPYTSQQLATDAADLLDALKIPKADVMGYSLGSYIAQQVAMMYPDKVNSLTLVGSS
                     CGGKDHTPKPPEFIKLQAEVVNKSLNNVSITQEEMKELISASVGSGWLKLHPEVIENI
                     PTDFQQLKPGLPPEVMDKQNNVGKEWEDNPNWSGACDELAKIAKPTLVITGTDDNKYQ
                     PYVNSLKIVEKIPGAWLVQIKNAGHAVMDQYPEEIGNILNTFLSTTAQSN"
     gene            9757..11577
                     /locus_tag="VLA74_01350"
     CDS             9757..11577
                     /locus_tag="VLA74_01350"
                     /EC_number="3.1.6.-"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HSF49378.1"
                     /translation="MFSYVLFILVVFLVSSVYMLSSNAYGQNENNNINDNRPNILVIM
                     GDDFGFSDLGVFGSEISIPNLDQLGKEGKILTNYYTYPVCSPARGTFLTGVDNHIVGI
                     GTMFENIAQNQLNKTGYETYITDRVVTVAELLRDAGYDTLLSGKWHLSGKGYHEGTGP
                     ADRGFDQSFSLLESGANHFTYEPYYPGGVTTFVDNGKIVEKPNSTKFSNEFYTDKMID
                     FIKTSIENNNNKPFFAYLAFQVAPTPFQAPPEYIKKYEGVYDAGWDKIREQRFEKQKE
                     LGIWPANMTLPQIYPTFPDWNALPEDEQKQRSKIFAAHAGMIEDMDYSIGRLIQFLKD
                     IGQYDNTLIMFTSDNGGSEPSDSPAVVAAFEGATDKEIEEFKGAGFSEAFDDIGTKYS
                     DWGYGWQGAVMSNTPYSGVKSTMFNGGIKPPFVIKEPNARNTPELDIVKEFVHVSDMT
                     PTFLEYANTTHPGSEYKGKQVASMMGKSIKPLLEDKVKKIHLDDETISAEMFGNRVVF
                     MGDWKARNNIFPLGDGQWKLFNIKQDIREATDLSKEHPDILEKMVSAYDEYAQNVGII
                     LPKYSEKQKKGVMEMLSATNQTEFKGFPLEKYLAGYPAEQ"
     gene            12263..>13075
                     /locus_tag="VLA74_01355"
     CDS             12263..>13075
                     /locus_tag="VLA74_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49379.1"
                     /translation="MQISGTSWDVTSHLMFEPETFFTPSHTLLYSGIGLIIIATILIT
                     HFYIKNKHSITNRPSKISFYLLLIGSVVCIISGPGDYLWHQIFGIDGLLSPTHISLMT
                     GILITSIGVVIGLARINISDTKTNNKLEILRNIALIPAFAALWFTIIWYVYFFSLPFS
                     NGERFNFNPDPYLASIIATLFLPLFGSMIFFIASKTISRFGAVTAIGGLVIFINLFAN
                     IIPTDGILFPSILWYFPLSFIPIIIADFLTNNFTFRKRNYKEKSINKIVAAAL"
BASE COUNT         4832 a         1817 c         2101 g         4325 t
ORIGIN      
        1 ggctagaact agttataagt tgagataatt tgtgtttttt aattaatttt gctttgtctg
       61 gtttttcttc cagaattctt tcaaaagcac atagtgaaat ccatttatat atccaaagat
      121 aattatacaa gtttgtaggg aaatttattt gtagccactt attttcagct ttaattttat
      181 ctaatgcatt gctattataa aaaattgaag gataatcttc atgaatattt tttaaaatta
      241 tgatttaaaa gaatttggta atttttcagc aaggattata ataatttaat caacattctt
      301 atataaattg ctcttaactt aaggattgat atcacaatat atataattca tgaagtcaat
      361 gatcaataat aaattgtatg aaaaaataga aatagtacta tttgtttaat ttgttattgt
      421 cactggaaaa atttgaggca gtagtaatag gttctggatt tgggggaacg atactgacac
      481 tttctttagc caataaattt gatgctgata attctttaaa taatactgac aaaaaggtct
      541 gtcttctaga aagggggcaa tggtggttgt ctcatgaaat taattataca ccaccatcaa
      601 agagaagtcc gtctcatgat acaaatacga gagaatttct tgatgatgat aaaagaccct
      661 atcacttttg gccatatcct aatacggtta ggggaaatat tgaaattgcc tcagctgcac
      721 gagcaataag tagaacgggt ctttatgatt acagagtcct tggcaatgtt catgttatag
      781 catctagcgg tgttggtggt ggttctttgg tatattctaa tgttaacctt gaaccagatc
      841 caagtgtttt tgtgaattgg cctacacaaa caatacttga tgaccctttg gataaaaaat
      901 tttcttataa agaagtatat ggtaataagg catcatcata tgcaaataat tctttagatt
      961 ttgacaaaat tatagatata gatgcaaaga atattagtta ttatgacata gcaagaaatt
     1021 tcattggcgt gaataaaatt actacaaatt caagtttggc aaagaataaa tttgagaaga
     1081 caaaggtttt tcaggaggcc ggccaatctc tcttggatga tggtaacacg agtattatca
     1141 atgtaatcga tattgcaggg aaaaaaaatg gtgattttga tgccgatctt gccataacca
     1201 atgttccagc aggtacattt gatttagata caagtaatat tagaaattct catccttgga
     1261 tatcagaaat taacaaatat tcttccataa cacagacaaa tgaatgtcaa aggcaaggaa
     1321 ggtgtaattt aggatgtatt ccagatgccc gacacacatt aaatagaaaa ttatttaata
     1381 tactacaccc tcaaaatggg actcctaaac cacttgaggt taaggaatta tgtgaggttt
     1441 atgatattga atttgttaat ggtgaagtat ataagataag ttactttaaa tatgacaaaa
     1501 gtactgaaaa tagagaacaa aaacaaatat tggcaaagat cctagtaatc tcagcaggtt
     1561 cattaggttc tactgaattg ctattaaaat gtaaagaact tggtcattta caacttagta
     1621 atatgcttgg aaaaagattc tacaccaatg cagatttatt tgcatatatg aatcttgata
     1681 agaaaaggat tgatataacg cgcggtccta ttataacttc ctacatatct tttaaaaatt
     1741 ctgacgatag cacatattac actatagaag acacgacaat tccaaagata gtagcaccat
     1801 tgttcgcgaa aatacttgaa ttaaattcca atttacaatc tgtaaatctt gttaatattg
     1861 ttagtttttt ggctagcaat ttatctttgc taccgggaat taacctatct aatctttcaa
     1921 acttgttatc tttaaatcca ttgcagtctt taacaacatt gtatactatg atttggaata
     1981 ataataatat tagaaacttt cttcgtcaaa atttaaaaaa tatttcccct actggcaatt
     2041 ctactcgtaa attcttggaa ggactattag actcgataac caccgatatc aaagataaat
     2101 ttgcgtctcc agaagaaaga atgtcaaagt tttttgtttt ttcatgtatg ggaagaggtg
     2161 aaaattcagg aaatctaaaa ctaaaaccaa attggcaaaa tatggagaat acaaatgatc
     2221 ctggcgaaaa attatctgtt gattggtctg gaaaagctaa taataactta tttgcaaaca
     2281 taatggtagg agttaaacaa ttagctggaa aaatagaaca aggtggaaat gcacgagtat
     2341 ttacgccttt atgggacttt aacaatccac aaaaaagtac ttgtgtaacg ctgcacccat
     2401 taggcggctg taacatggga gaagatatga acaacggagt agtagatagt tatggtcagg
     2461 tattttggaa tgacgattca gaagataaaa cgaaagtcta tcccaaatta tatgttgttg
     2521 atggatcaat aataccagaa ccgttaggtg taaatcctgc tttgactata tccgctcttt
     2581 cttttagagc ggctaaacat attttgatag gtatttccga agtaccatta tcaccagaac
     2641 aggcaaatga atatttacca aaataaaaat taaaaggaaa cgatacattt ctaaaataat
     2701 gagtaatagt gcaaaatttt aagattactc tattgtattc tacaagcgac gtttaaaatt
     2761 caatattaaa tctggtaaca taaatattta aagagatgag attttagctc ctaaaaaata
     2821 ttgcttataa tacttcaaaa caaaacagct agatttatga tatgctataa tatcatagta
     2881 taccgatcta actcaaagta attctttaga gtttgtagtt gcttttattg taaaatgaaa
     2941 agtatttcta taacaactcc tcagagtatg cgctaagcta taaatataga tataagatct
     3001 cctaaaaata atcatcaatt tttagcgatg gttataaata gtatgaaaat tgcagaaaaa
     3061 atattcgatg atgacctaat gttgattaat acattttcta ccaagtattt ttgcaatatc
     3121 tgttcgtatc gtatcatcct cagaggaata cttgagttaa ttaagccagt taaacgtact
     3181 ccataactaa tagaaaacaa attattagta gaaaatcagt ttttacatta ataacttcaa
     3241 tttgcaaatt gctgtattta tgaaattagt tataaatatg atcttatttt ataaacacaa
     3301 taaaaatttt tgatttaaat aaaatgttat tttaaaaatt atttcagaaa gatatttgtt
     3361 agatcttgca ttattattta taagagctaa agattttgta agttgtaata atgtaatgtt
     3421 gttaaaacta gctagtgatt taatttgctt tcatctttca ccatcttcct taaatattag
     3481 caactaactt tagagtaata aaatggttat aatcgagggt tatatacgtg atgtatctaa
     3541 tcaaccttta tctggaatac ctattcaagc ctttcaggat cgtcaattaa ttggagatct
     3601 taatcttaca cttaatcctg taattactga taataacgga tacttcaaac taataccaac
     3661 tagagatatc gaagctgtaa attcaaatgt ttatttagtt gtgatagata ctgaaaaaaa
     3721 atttgtatca atgagagatt ggaaaagtag atacaaaagg gaaaaaaagg aaattatatt
     3781 taatggtgta aaagcgagaa gatggaaagg caatattatt gacaatctag ataacataat
     3841 agaaattatc gttattcgtg atcagataga agttccaaac acatatgaat cagtagttat
     3901 tggctcaggt tttggaggaa caattatttc tttatcaatt gcaaaaaaat atgatgaaaa
     3961 aaataaaaaa gatgcaggaa aaagacgtgt ttgtatactt gaaagaggtc aatggtggat
     4021 tagccacgaa atatctcaat cattagatca gaattcaata gagtcaaagt ccttacgttc
     4081 ctatttaata aagaataata tgccattcaa tacttgggca tatccaaatg atctgaaagg
     4141 aatgttaact gctattggaa attctagggc tgtaaattca gttgaaggca tttacgatta
     4201 taaaaagatg aaaaatgtaa atatcatttc gggtagtggt gttggaggag gttccttagt
     4261 ttactttaac ctaactgtaa aaccagatca taatatatat gaaaattggc caacagaaca
     4321 tgatggaaat ccttcactag ataaatactt ccctattgca gaagatttcc taggagttaa
     4381 tacaataaca actaattctg cattatcaaa tcctgctttc aaattaccta aatccaaggt
     4441 ttttcaagat gcagccaaaa ggatcaacaa taattctccg caaattttga atatttctaa
     4501 ccttgatgca caattatcaa ttacagatat atcaagtgat gttttcaatc catatattgg
     4561 tcgtccaaac caagatgata ttacaaaata ttccagtttc cttgaaaaaa atatttgtca
     4621 aagacaggga agatgtggtt taggatgtat taccgaagca cgccatacat tagataaaca
     4681 aattgttaat gccataaata caaaaaaatt tccaatagat gtacatccat tatgtgaagt
     4741 attagatata tatgaaactg gtgagcaaga ttataaatat gcagtaaaat ttttggatta
     4801 ccgttatata atagataatg atgacttttc tcctactaga gagttaagcg aggaagaaaa
     4861 gactagtatt actaaaataa ttaaaactaa acaagtgatt ctttcagcag gaacattagg
     4921 atcaacagaa attttactaa aatcaaaaaa actaaattta agtgatatgt tgggaaagaa
     4981 attttctacg aatggtgatt tttttggaat aatcaatcca acaaaatata atgttgattc
     5041 cgctagagga ccgcttctaa cttctatagc tttatttaag gctaataaca attttgcttt
     5101 ttcaatagaa gatttaggtg ttccaagaat gtttgcagat gtatgtgcta ctatatttga
     5161 cattatgagg gaacaaaaag gctctattcc attaaaatca tttataccta ataaaaaatt
     5221 tactgcattg tttactcaaa tggttcttaa taatattaat tttgataatc ctgaaactag
     5281 aaatatttta tctaaactaa agggattaga tatccctact ctttcaactt tccttaacat
     5341 tttttctaat ttagtaaatc tcttttcaaa aaataaacta aatagatccc ctgaagaacg
     5401 tgtatctaat atcttagttt tatttggaat tggaagagat gttaataaag aatcaaaatt
     5461 gttttggaat gataaagata atagaataga tttagataaa gagtataatt tagatcaaga
     5521 aatttacgat aaaatattga atggtatgaa attgtttgca cgagagatag gaagagaagg
     5581 agaaaatagt ctcataatac ctttatggga caatcaatct aaaacacaaa tatctgctca
     5641 tcctatagga ggatgtccaa tgtctaagga ttcgtctgat ggtgtagttg atagtttagg
     5701 aagagtattt agaggtaaaa atggaaacgt tatatatcca ggattatatg ttgtagatgg
     5761 atcgataatt ccaacatcgt tgggagtgaa tccctctcta actataagtg ctttggcatt
     5821 tagaatagcg tctcacattg aacaaaattt atcgtagtat ttcaatattt tgagataatt
     5881 ttcgaattcc tactaggtga atttggttca caaatgacag aaacaaacat tcaaaagtta
     5941 aaaattttat tagtctaaat cgctaaaatt tgatgatcta tatttagaat tagaatttta
     6001 tattatgatt acaatttatt tttacgtttg tatcattaat aaaattcata tataatatta
     6061 ttttaataac tcaattaaaa tttttaggcg cctaaaaaat agataaataa attgaaatat
     6121 aataaattta ttcctgtata gttatcagtg tcaaaagata gtggggagtg gaatgtaagg
     6181 tatcattcca aaattgttgg aatacatact gcattgttaa aaaatggcaa aattattctt
     6241 ttttcgtatc ccagtagaga agaacatgat aataatggag aagatcatcc acatagtgtc
     6301 tttggaagtg cttcacatta tggagtatat gaaattatag atgtagacaa ttggactgga
     6361 gaagaaccga aaagaattaa aaaaaatgta ttttgtggtg gtcattgttt tttagataat
     6421 ggagatttat ttgtttctgg aggtcaatat caaacaattc ataatcctct tctgttaatt
     6481 gatcctccaa gtatatgtac acatttattc tcaattcata acaatgaatg gaaactaaga
     6541 aaacgttctc ttttagccag atggtatcca tcttgtgttt ctctttttga tggaactatt
     6601 ctaattattt ctggaagtta tggaatatat ggtgttaaaa aagttggacc atttaacttt
     6661 gtaaataaca gattagaaat ttacaataaa gaaataggat tacaaaaaat acaaaagatt
     6721 ccatttggat taggattgta tccattctta tatttgttac caaatggaca agtttttgtt
     6781 cattccgata gaacatctag aatttatgat attaaaaata acatgtggat aaaatctgaa
     6841 tctacaaata aaatactcga aatacaaaca aactatgaat attccagaac aaaccctgta
     6901 cagggaacca gtataattct tccatttaat aataataatt ttactgaagc gaaaattatg
     6961 ttaattggag gaggcggaga gtcagatgat ccagatattg atactcctgc aaccgatacg
     7021 tgtgaaataa taacaatacg taataatcag gatttaaaat cagaaccacc tcgatggcaa
     7081 tacacaacaa aaatgaattt tagaagagta atgcctgatg gagtattact cccaaacaag
     7141 aaagttttag ttgtaaatgg aactgcaaat ggaaaatcag atgcaggaaa agatccagtt
     7201 ttaactgccg agctttataa tcctgaaaat gagtcatgga ccgaattaaa tgaaatgaaa
     7261 gtacctagac tatatcatgc taatgcatta cttcttcctg aaggtaacgt tatgacaagt
     7321 ggcacagaca aagaatggaa tgaaggtaaa gaacatgatg aatacaggat tgaagtattt
     7381 acaccacctt atttgataaa gaataatatt tcagaattaa tccggccaat tattaaaaat
     7441 gtgaaaacag aattaagtta tggaaaagag atactaatag agtctgatca agcagaagaa
     7501 attacctccg ttacaataat aaggcctagt tctgttactc attcacttaa tacagatcaa
     7561 agatgtattg agttaaaaat aatagataca aaaaagaatg agcttaatgt gatgatgcaa
     7621 aataattcaa atattgcacc accaggctat tatatgttat ttattttaaa taaaaatgaa
     7681 acaccatcaa aagccaaatt tatacgattg agttgattta gggtatggtt aattataatt
     7741 aactggtccc actttataga agggttcaaa tcccactggc cccatagtat ataaatattt
     7801 tgtttttatc tattggtaga taatgataac taatatcaga taatgatgtt attacagaaa
     7861 ttatctcaaa caaaggacac aataaagaat tgacatcata tataatattc aaaatatgca
     7921 attaaagcag agtctactaa aaaagatcat gagacaagac taatgaaatt tctttgtctt
     7981 tattgaattt taaataactg ataaaaacat ctttttaaaa tcttgaagta tttcgttaat
     8041 tccattaata tgtttttcaa ttaaatagtt gtggtatcaa tcttgttggt atcaattttt
     8101 gaatattata tgtgataata agacaataag gttaatagta agtagatgtt tccccaatac
     8161 atataacaaa atgtattacg taccaaaagt taaggaaaat aaaacttcag ttttcatcat
     8221 tatcttcatg tttataatga ttatccctac tactgctatt atgttgacta ctattactac
     8281 tagcaatcct gtttatggtc agcaagataa gacaagtttc aatgtaacag atttatcaaa
     8341 catacaaagc attcctgcaa aaaaagttca ggtaggagat attgaaattg cctacaagat
     8401 gttaggaaaa ggtgatccta ttttactttt caatggcggt tctgatatta tggatgcctg
     8461 ggacccatcc tttctaggga tcctttcttc aaataaaaca gtaattgtgt ttgatagtcg
     8521 tggacttgga aatacaacaa tgggttccaa accatacact tctcagcagc tagcaactga
     8581 tgcagctgat ctgcttgatg ctctgaaaat accaaaagca gatgttatgg gctattctct
     8641 tggatcatat atagcccaac aagttgcaat gatgtatcca gataaggtta acagtcttac
     8701 acttgttggc tcatcatgtg gtggaaaaga ccatacacct aaaccacctg agtttataaa
     8761 attgcaagcc gaagttgtaa acaaatctct aaataatgtt tctattactc aggaggaaat
     8821 gaaagagctt atatctgctt cagtgggatc tggatggctt aaactgcatc ctgaagtaat
     8881 tgagaacatt ccaacagatt tccagcaact gaagcctggg cttccccctg aagtaatgga
     8941 taaacagaat aacgtaggaa aggagtggga ggacaatcca aactggagtg gtgcttgtga
     9001 tgagcttgcg aaaatagcca aacccacttt ggtcataact ggaactgatg ataataagta
     9061 ccagccgtat gttaattctt taaagattgt agagaagatc ccaggagcct ggcttgtaca
     9121 gatcaaaaat gctggtcatg cagtaatgga tcaatatccg gaagagatcg gtaatatatt
     9181 aaatacattt ctatcgacta cagcccaatc caactaataa tatatttttt ataatctagt
     9241 aatagtcgta tgatgagtta gttgtattcc ataaaatcaa taagtagatt agattcaata
     9301 ataaaagaac caagtatctt ttataagttc gaatccaatg ttatgttttt tatctttttt
     9361 taggacaaat atattgttca aaacaattca caaacttcag gtccccattt ataatctttt
     9421 aaagttaatt tggtaacata tctaatattt ttatttgaaa atataaactt atttagttaa
     9481 tgggatcaag cagatcttaa tttactcaaa tccttacata ggaaatcttt taagctaacc
     9541 aatgatttta caataaacat ataatctata actttaattt aatataggtt aattctcctt
     9601 ttttacattt gtttaattta atcaacgaaa ataaattaaa ttatttattg ttcagaatag
     9661 aattatttaa aatatgttgt taatatatag aaaatttaga atatttaaat aagtttaaat
     9721 aataaggttg tttgggacat ttatatgaga aaattcatgt tttcttatgt tttatttatt
     9781 ttagtagtat ttcttgtatc atcagtttac atgttatcaa gtaatgctta tggacagaat
     9841 gagaataaca acattaacga taacagacca aatatattgg taataatggg agatgatttt
     9901 ggtttttctg atctaggcgt atttggtagt gagatttcta tacctaattt ggatcaattg
     9961 ggaaaggaag gaaaaatctt gactaattat tatacatatc cagtatgttc tccagcaagg
    10021 ggtacctttc ttaccggagt tgataatcat atagttggca ttggtaccat gtttgaaaat
    10081 attgctcaaa atcaattgaa taaaactggc tatgagactt atatcactga tagagttgtg
    10141 actgttgcag agttactaag ggatgcaggc tatgatacgc ttttatcagg gaaatggcat
    10201 ctttcaggaa aaggatatca tgaaggtacg ggacctgcag atcgaggatt tgatcagagt
    10261 tttagcttac ttgaatctgg agcaaaccat ttcacatatg agccatacta tcctggtgga
    10321 gttactactt tcgtagataa tggcaaaata gttgaaaaac caaatagtac taaattttca
    10381 aatgaattct atacagataa aatgatcgat ttcattaaaa catcaataga gaataacaat
    10441 aacaaaccat tctttgcata tcttgcattt caggtagcac ctacaccatt ccaagcaccg
    10501 ccagaataca taaagaaata tgagggagtt tatgatgcag gatgggataa aataagagaa
    10561 caaagatttg agaaacaaaa agaacttgga atatggcctg ctaacatgac attaccacaa
    10621 atctatccaa cttttccaga ttggaatgca ttacctgaag atgaacaaaa acaaagatca
    10681 aagatatttg cagcacatgc aggtatgata gaagatatgg actatagtat cgggaggcta
    10741 attcaattcc ttaaagatat tggtcaatat gataatacac taataatgtt tacatcagac
    10801 aatggaggta gtgaaccatc tgattctcct gcggtagttg cagctttcga aggtgccact
    10861 gataaggaaa tagaagaatt caaaggagca ggctttagcg aagcttttga tgatatagga
    10921 actaaatact ccgattgggg atatggctgg cagggagctg tcatgtcaaa cactccatac
    10981 tctggagtta aatcaactat gttcaatgga ggaatcaaac caccatttgt aataaaggag
    11041 ccaaatgcaa gaaatacacc tgaacttgat attgtaaagg aatttgttca tgttagtgat
    11101 atgactccaa catttttaga atatgcaaat accacacacc caggttcaga gtataaagga
    11161 aaacaagttg cttcaatgat gggaaaatcc ataaaaccac tcttagaaga taaagtaaaa
    11221 aagatacatt tagatgatga aacaatatct gcagagatgt ttggtaatcg tgttgtattc
    11281 atgggggatt ggaaagcacg aaataatata tttccattgg gtgatggaca atggaagcta
    11341 tttaacataa aacaagatat cagggaagca acagatctgt caaaagaaca tccagatatc
    11401 cttgaaaaga tggtttctgc atatgatgaa tatgcccaaa atgttggaat tattctacca
    11461 aaatatagtg aaaagcaaaa aaagggagtg atggaaatgt tatcagcaac caatcaaaca
    11521 gaatttaaag gattcccatt ggagaagtat ttagcaggct atccagcaga gcagtgaaac
    11581 tagaaagcag aagtaaatca ttcaaataat atgtcttatt ttttactctt taaagtagac
    11641 aaatatttgt agtcaaatat acctcttttg tgtatagcac atatctctta ttattaaatt
    11701 atctcattaa tctattgtaa aatcaaaatc attaatttag ataaatatta catctccagg
    11761 atagcaaatt tctctttaga ttggctttgg atatgacatt ctataataca tatgtcatat
    11821 attagtttca tacgacaatc ttatcttctt cataaaacca tttccatttt tcaatcgttt
    11881 tatatgattt taaaatagga taaccagtct ttggaaataa tttgtgtcat atttagtaac
    11941 tgaagaatta caataattta tatgtccgta taaattacaa atttgtattc aataaaagaa
    12001 tattactttt ctattattaa ataacttata agcaagatca atttgttaaa ttaattgatc
    12061 tcactttata gaaggttttt aatttccatg cctataactg attttattta ttaatcaaaa
    12121 atgactgact agtcagttaa attaatatac tactttgtct atataatatg atatgctttc
    12181 gagattgaat tcaaaaatat tctcacaaaa catttttgaa ctctatttat ttatttttat
    12241 tctagccacc ttaggctcaa ttatgcaaat atcaggaaca agttgggatg ttacttctca
    12301 cttaatgttt gaacctgaaa ctttttttac accatctcat actttacttt attcaggaat
    12361 aggcttaata ataattgcaa ctattcttat tactcatttt tacattaaaa ataaacatag
    12421 tataacaaat agaccttcta aaatttcatt ttacttgtta ctaattggct cagtagtttg
    12481 tattatttct ggtccaggag attatttatg gcatcaaatc tttggaattg atggtttatt
    12541 gagtcctaca cacatatcat taatgacagg tatactaata acatcaattg gagtagtcat
    12601 aggattagca agaataaata tttcagatac taaaacaaat aataagttag aaattttaag
    12661 aaacattgct ttaatcccag cctttgctgc attatggttc acaattattt ggtatgtgta
    12721 tttcttttct cttccctttt caaatggaga aagatttaac tttaatccgg atccttattt
    12781 agcatcaata atagcaactt tatttttgcc tttatttgga tctatgatct tttttatagc
    12841 ttccaaaact ataagtagat ttggtgcagt cactgccata gggggattag ttatttttat
    12901 taatttattt gctaatatca tacctactga tggcatttta tttccgtcca ttttatggta
    12961 tttccctctt tcattcatac caataattat tgctgatttc ttaactaaca attttacatt
    13021 tagaaaaaga aattacaagg aaaaatccat taataaaata gtagcagctg catta
//
LOCUS       DATIAS010000069         3530 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1239788, whole genome shotgun sequence.
ACCESSION   DATIAS010000069 DATIAS010000000
VERSION     DATIAS010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3530
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239788"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..893
                     /locus_tag="VLA74_01360"
     CDS             297..893
                     /locus_tag="VLA74_01360"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M57 family metalloprotease"
                     /protein_id="HSF49380.1"
                     /translation="MMISDIDTAFAKKDSKRKTIDICCSWGNSISDGVLTFSIKNGGS
                     DLAKIVKVAIKDWEKALGDSVQFKNVKEDDSDADIEIEFKKGKGEKVGKAVTFFDHNG
                     KIDHVKISISKKSYGRTLDQPLLEHVAKHEFGHALGLGHANFKESLMSVHVNKVVTKI
                     SACELESVKYVNNWKFTDDDDDKSSSTLDKDGFRCKNK"
     gene            complement(1181..2299)
                     /locus_tag="VLA74_01365"
     CDS             complement(1181..2299)
                     /locus_tag="VLA74_01365"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSF49381.1"
                     /translation="MISYFFLIDFKSSIYAQEFQVNPNDYFYSKQNPTNSQTTATTNS
                     EDTIKENCINNQIESVLYSNNDRGSDSYFSNFHFIKKFDQDGNLIDTWGTVGSNDGQF
                     LHAHGITIDSEDNVYVSDAENCNIQKFDASGIFISKWGTKGIGPGKFLQPESMDVDSM
                     NNIYVAEYSDQNIQKFDSEGKFINMWGQEGKKKGEFKKPWGVAVDSSGNVYVADQTLP
                     RVQKFDSNCKFIDMWGKEGKKKGQFVHLHDITVDSKDNVYVTDGRENSRISVFDGNGK
                     FIKMWGSEGKGKGQFIENHGIVVDLEGNVYVVDTRNVRVQKFDSEGNFLTMWGSLGCK
                     DDQFLIPHDIAIDSKGYIYVTDSGKSHFRANYNCNQGT"
     gene            complement(3191..>3530)
                     /locus_tag="VLA74_01370"
     CDS             complement(3191..>3530)
                     /locus_tag="VLA74_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49382.1"
                     /translation="IIDQAKLNRPGNVAIQLAMLYDYKTNPPLYSQWQKNFRNYQPHT
                     LIVWGKNDYIFPESGAHPYKRDLKDVETFILDTGHFALEEDCDVIAEKISGFFSSRPE
                     IKAEVKAIEA"
BASE COUNT         1199 a          551 c          501 g         1279 t
ORIGIN      
        1 gattattgtt agaatatgaa aatctagaat aaatatacag aacatataat ggaattgaat
       61 aaatataaca catcaatatc atatcatatt atcgtatgca acattgtata aagatacttt
      121 tacctaaatc ttttttattt cttatttcta ttcttattat aaacaagaat gttatcaaag
      181 aaagaattaa ttcgaaaata cattcaaata cctcgaatta cagggtaaat aagataatta
      241 ttcacttcaa accttacatt ttagtaactc tattattttt tattcttttc accacaatga
      301 tgatatcaga catcgatacg gcttttgcaa aaaaagattc aaaaagaaaa acgattgata
      361 tctgttgtag ttgggggaat tcaataagcg atggagtatt aacattttct atcaaaaatg
      421 gtggatccga cttggctaaa attgtaaaag tagctattaa agattgggag aaagcattag
      481 gggattcagt acaattcaaa aatgtaaagg aggatgactc tgacgcagat attgaaattg
      541 aattcaaaaa gggaaaaggg gaaaaagtcg gaaaagctgt aacattcttt gatcataatg
      601 gaaaaattga tcatgtgaaa atttcaatct ctaaaaaatc ttatggtcgt accttagatc
      661 aacctctatt agagcatgtt gcaaaacatg agtttggtca tgctcttggg ttaggtcatg
      721 caaatttcaa agagtctctt atgtctgtcc atgtaaataa agttgtaaca aaaatatctg
      781 catgtgaatt ggaatctgtc aaatatgtta ataattggaa gtttactgac gatgacgatg
      841 ataaatcttc cagtactcta gataaagatg gttttagatg caagaataaa taagttgtga
      901 gaaaatatct ctttgtgaat tatcaaatac attttacttt gtctttcatc atttctacca
      961 acaatatatt acaaggaagt atctatgaaa atattttatt tcttttattt gagtaatcgt
     1021 atttcatatg atttacatca atatattatt tataaaaata attgtatact ttttatctgt
     1081 ttcaacattc gtatggaaag aatttttcat attgataaat agttacgtta ctagaatcta
     1141 ggtgcatttt agaaagtatt atcataatct atagattgta ctaagtacct tggttacaat
     1201 tgtagtttgc cctaaagtgt gattttccgc tatctgtaac ataaatatag cctttagagt
     1261 ctatcgcgat gtcatgagga attagaaatt ggtcatcttt acatccaagt gatccccaca
     1321 tagttaggaa gttaccttca ctgtcaaatt tttgaactct aacatttcgt gtatccacta
     1381 catagacatt tccttccaaa tcaacaacaa taccatgatt ttcgataaat tgacctttgc
     1441 ctttcccttc acttccccac atttttataa atttaccatt accatcaaaa accgatattc
     1501 tagaattttc tctaccatca gtaacataaa cattatcttt agagtctact gttatatcgt
     1561 gtaggtgtac aaattgacct ttctttttac cctcttttcc ccacatgtct ataaatttac
     1621 aattgctgtc aaatttttga actctgggaa gagtttgatc cgcaacataa acattaccac
     1681 ttgaatctac cgcgacaccc cagggctttt taaattcacc tttcttctta ccttcttgtc
     1741 cccacatgtt tatgaattta ccttcactat caaatttttg aatattttga tctgaatatt
     1801 cagcaacata tatgttattc atggaatcta catccatact ttcaggttgc aggaatttac
     1861 ccggacctat tcctttcgta ccccatttgc ttataaatat tccactggca tcaaatttct
     1921 gaatgttaca gttctctgca tcgctaacat atacattatc ttccgaatcg atggttatac
     1981 catgagcatg gagaaactgg ccgtcattag atcctacagt accccaagta tctattaaat
     2041 ttccatcttg atcaaatttt tttataaagt gaaaattaga aaaataggaa tcagaacctc
     2101 tatcattatt ggaatacaaa acagactcaa tttggttatt gatacaattc tctttaattg
     2161 tatcttcaga atttgtggta gctgttgttt gagaattcgt tggattttgt tttgaataga
     2221 aataatcatt cgggttaact tgaaattcct gtgcatatat tgaggatttg aaatctatca
     2281 ggaaaaaata tgaaatcatc aaactaaatg taatacagag taagttgagt gcattcttca
     2341 caatcttaaa ttgctctgta tatttattaa gattgtatag gaaaattatg gtctatttct
     2401 ctagtacaac aatcgaacaa atacaaaaaa attaacatta actaatccat tcaaattatg
     2461 actaatatag caacaattta ttgatggtaa taacttgcaa taaatcaata atacaactga
     2521 taaataaagt aattaaaatt tgatttaaca aaatattata gaaatatacc gagcttttca
     2581 tttcagcttt gataatgttt ttatgttgta atgattttat ttgacaaaat aataaatcta
     2641 taactttggt aatgtcttat atttggtgct aaacaaattt ttttctataa ttaataacca
     2701 cggtatattt tagacatttt tacttgtttt ttcaatagaa caaattgaga aagggaccga
     2761 agtttatgtc aaatttgttt cacaaaccac tgacccgatg actcttggtt ccaatcctat
     2821 ttttactaga acttatgaag taacaatatg atttgaactc gcagttaatc tttacctttt
     2881 tattatttat ttgctttttg tccaaattta tctaagctat atttaatgtc tttatctata
     2941 atttcaaatt ctataaagtc aaagaatttt ttcaatcttc tttcaaaata ttttatagta
     3001 atcactgtct taattgcgta tttgaacatt agataaggag aaaattcatt ttgtgtcgtt
     3061 cattgggtat gatttctatg aaacaatcgt taattgacat tccttacata taataaaaaa
     3121 atggggtcta aataaagata caggttagca ataggccagt cgaatgagat ctttgacatc
     3181 gcattgtata ttatgcttca atagccttaa cttccgcttt tatttctggc ctggaagaaa
     3241 agaatccaga aatcttctca gctattacgt cacaatcttc ttctaaagca aagtgaccgg
     3301 tatcaagaat gaatgtctct acatctttta ggtctctctt gtatggatgt gctcccgatt
     3361 ctgggaagat gtagtcgttt ttaccccata caattaaggt atgaggctga taatttctaa
     3421 aatttttttg ccactgtgaa tatagtggtg gattagtttt ataatcataa agcattgcta
     3481 gttgaattgc aacatttcca ggacggttca atttagcctg atcgattatc
//
LOCUS       DATIAS010000070         2112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1376759, whole genome shotgun sequence.
ACCESSION   DATIAS010000070 DATIAS010000000
VERSION     DATIAS010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376759"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VLA74_01375"
     CDS             <1..259
                     /locus_tag="VLA74_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49383.1"
                     /translation="EACTSLRLEHRLHSPYEKSIIERAIEYVKDRTEQFDDCYPCRKL
                     DCNLLHVHNWIQLFVFMHNGITRSHLKFRLLMYLIGGDTSH"
     gene            complement(363..1148)
                     /locus_tag="VLA74_01380"
     CDS             complement(363..1148)
                     /locus_tag="VLA74_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49384.1"
                     /translation="MDKTATTNLYPLIIIVFLSFILLAGAIITINQQILKIFTSWNVE
                     YFKVFADQKEEKEKDNDENPLEQKICNKLFELETCEQMEKEKPIEKKKLTKEEIKEEA
                     IINRYLEPVDESKKKSMIDNRLSNETEIGNSNIDSSNSVILSNEMAQKNVTNINQQSN
                     SDGLLSTQINRPSIKNPPILQNSQNINNLNQVQLVDLIASTISNENNIDKNKIIQSIN
                     DLIEPTKAKGGNVIDLLKKIADNILKEPSGSIANKILNIDKTK"
     gene            complement(1287..1973)
                     /locus_tag="VLA74_01385"
     CDS             complement(1287..1973)
                     /locus_tag="VLA74_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49385.1"
                     /translation="MKNKINSKNSNLISLSLMVLASFIILFAYLSEKSENALAQIQNN
                     NQGTNELITQEQGGENKKIVQQGVVTSSPDPLPGHEAHQSVTILRLKGDNTIYEGTLS
                     FISSKPVEVQLIYRNMTSPNTSQSAPPAIDPQFGIMNIISLPGGQGSVISSLIQPQYP
                     EDATSFSASIPFAANGLALHNLDGDEFVTTYTVVADEVGPGQRADEIINPPAEEEDED
                     EDEDEDEDNN"
BASE COUNT          648 a          298 c          318 g          848 t
ORIGIN      
        1 tgaagcctgt acttctttga gattggaaca caggttacat tcaccttatg aaaagagcat
       61 aattgaaaga gccattgaat atgtaaagga tagaacagaa caatttgatg attgttatcc
      121 ttgcaggaaa ttggactgta atctattaca tgttcacaac tggattcaat tatttgtatt
      181 catgcacaat ggtatcacaa ggtctcatct aaaatttcga ttattgatgt accttatagg
      241 aggtgataca agtcattaac ttaacaccac ctctttcttg tatgtaaagt ttttatagtt
      301 tatgagatta acatagttaa aatttctaca aatacgaatg tacattcctc tagattggaa
      361 aattattttg ttttatctat gtttaatatt ttattagcta tgcttccaga aggttctttt
      421 aaaatattat ctgcaatctt tttcaataga tcaataacat tacctccctt ggcttttgtc
      481 ggttctatta gatcattaat tgattgtata atcttatttt tatctatatt attttcatta
      541 gaaattgtag aagcaattag atcaaccaat tgtacttgat ttaaattatt tatattttga
      601 gagttctgta aaataggagg attttttata gatggtcgat taatttgtgt tgatagcagt
      661 ccatcactat tggattgttg atttatattc gtaacattct tttgtgccat ttcatttgaa
      721 agtattactg aattactact atcaatattg ctattaccta tttctgtttc attactcaat
      781 ctattatcaa tcattgattt ttttttagat tcatcaactg gttctaaata tctatttata
      841 attgcttctt ctttaatctc ctcttttgtt aatttcttct tttcaattgg cttttctttt
      901 tccatttgtt cgcaggtttc taattcaaag agtttattgc aaatcttttg ttctaatgga
      961 ttttcatcat tatctttttc tttctcttct ttctgatctg caaagacttt aaaatattct
     1021 acattccaag aagtgaatat tttaagtatc tgttgattaa tggttattat tgctcccgct
     1081 aatagtataa atgataaaaa tacaataata attaatggat atagattagt agtagcagtt
     1141 ttatccatta ttaaaataaa tataagaact tatttttatt gattatgtta aacataaaaa
     1201 gtaaaaaaag tttttattaa ttcaaatcaa tatataaatg acttttatta taacttaatg
     1261 ctaatgagaa taaaatgact catcaattag ttgttatcct catcctcatc ctcatcctca
     1321 tcctcatcct cctcttctgc aggtggattt ataatctcat cggctctttg tcctgggcca
     1381 acttcatctg caactacagt atatgttgtt acaaattcat ctccatctaa attatggagt
     1441 gctaaaccat ttgcagcgaa aggaatagat gctgaaaagg aagtagcatc ttcaggatat
     1501 tgtggctgta ttaatgagga aattactgag ccttgcccac ctggtaatga tattatattc
     1561 ataattccaa attgaggatc tattgcagga ggagcagatt gagaagtatt tggcgaagtc
     1621 atatttctat atattagttg aacttcgaca ggtttagaag aaataaaaga tagtgtacct
     1681 tcataaatag tattgtcacc ttttaagcgt aatatagtaa cactttgatg ggcttcatgt
     1741 cctggaagag ggtcaggtga tgatgtgact acaccttgtt gaacaatttt tttattttct
     1801 ccaccttgtt cttgtgtgat taattcattg gttccttggt tattattttg gatttgtgct
     1861 aatgcatttt cacttttttc tgataaatag gcaaaaagaa ttatgaaaga tgctagaacc
     1921 attagagata gggaaattag attggagttt tttgaattga tcttattttt cattatcaga
     1981 aaagtattct aactaggatt tatccttttt tgatattctt tgtaatcaga tcatcaatat
     2041 tagatgtagt tattgcgggg ttgttgccta attcagttta acagatggta aatagaattt
     2101 catgattttg tt
//
LOCUS       DATIAS010000071         2075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1648976, whole genome shotgun sequence.
ACCESSION   DATIAS010000071 DATIAS010000000
VERSION     DATIAS010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1648976"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(247..720)
                     /locus_tag="VLA74_01390"
     CDS             complement(247..720)
                     /locus_tag="VLA74_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HSF49386.1"
                     /translation="MTTPSETVNGEALYLGTAESEHIEMYLKAIWFIRERGQEVKVSS
                     IAKLLNVKQPSVVQMLHKLNDANLVFYAKGNLVQMTQRGERIGKQMIRNTRLLEVMMN
                     DALKIEIDEEMVCGIEHHMKTKFTDALCTLLNHPKFCPHGLTIPNGKCCKSSKKV"
     gene            826..1971
                     /locus_tag="VLA74_01395"
     CDS             826..1971
                     /locus_tag="VLA74_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HSF49387.1"
                     /translation="MFKINQITVLGSGIMGHGIAQISSMAGYNVILRDIEQSFLDKAM
                     DKIKWSVNKLVEKQKINNTEAEQIINRIHPVVDMEQSLKNSNMVIEAVPEDLNLKKKV
                     YQEIEKFATDDMIFASNTSTLPISEISSFTTRPEKFIGLHFFNPPQLMPLVEIIPGSK
                     TKQEITDLAINFVQEVKKTPIVCKKDVAGFIVNRIFIPLVHEAAYSLDRSDASMVEVD
                     SASKYKMALPMGIFELADYTGLDVIHKATFEMYSRDKKVIFPHPKIQQLYENKELGQK
                     TGKGFYPYQGENYERVQLTEEAAAKFDPIPLVSVAVNNASWLISHGVCTREELEKALK
                     LGMGLKRELFNTAETIGIENIINTLKDLQSQNETFYEPDKYLLSLQK"
BASE COUNT          731 a          318 c          319 g          707 t
ORIGIN      
        1 taattctcat aaattccttt tatacatgga catactatgc ggagcacaga tattggtcta
       61 tagaattatt cagaaaaatt atttataaga tattaaaaga aaaggatgat caagaaaact
      121 atcctatagt attatggtac aaatgacaac tagtattttt taatataaga gaataatttt
      181 gaggttatgt atacaaaacc attatttttt gttaattcat tcattatatt cttcttcgtc
      241 ttcttgttat accttcttac tgcttttaca acatttacca tttggaatgg taagtccatg
      301 tggacaaaat ttaggatgat ttaacaaagt acataatgca tcagtgaatt ttgtcttcat
      361 atggtgttct attccacata ccatctcttc atctatttct atttttaatg catcattcat
      421 cattacctca agtaatctag tatttcggat catctgtttt cctattcttt ctccacgttg
      481 agtcatttgt actaaatttc cttttgcata aaatacaaga ttagcatcgt tgagtttgtg
      541 aagcatttgt actaccgatg gttgtttcac attgaggagt tttgcaattg agcttacttt
      601 gacctcctga cctctttcac gaatgaacca tatcgccttt aaatacattt caatatgttc
      661 agattcagca gtacctagat acaatgcttc tccatttact gtctcagaag gcgtggtcac
      721 ggtacacatg attctatctg attctaatta ttaactttat cccagtatta ttggactata
      781 aaattgaact aactttaaat ccctcattat ttgaataaac ttttgatgtt taaaattaat
      841 cagattacgg ttttgggttc aggtattatg ggtcatggaa tagcacaaat ctcttctatg
      901 gcaggataca atgtaattct cagagatatt gaacaatcat ttttggataa agccatggat
      961 aaaataaagt ggtcagtaaa caaattggtc gaaaaacaaa agataaataa tacagaagcc
     1021 gaacaaatca ttaatcgtat ccatcctgtt gtagatatgg agcagtctct aaaaaattca
     1081 aacatggtca tagaggcagt tcctgaagat cttaatttga aaaagaaagt atatcaagag
     1141 atagaaaaat ttgcgacaga tgacatgatt tttgcatcaa atactagcac tttgcctata
     1201 tcagagatat cctcttttac aacaagacct gaaaaattta ttggtctgca tttctttaat
     1261 cctccacagt taatgccttt agtagaaatt attccaggat ccaagactaa acaagaaata
     1321 acggatcttg ctataaactt tgtacaagag gtaaagaaaa ctccaatagt atgtaaaaaa
     1381 gatgtagctg gctttatagt caatcgaata ttcattcctc tagttcatga ggctgcctat
     1441 agtcttgata gatcagatgc atccatggtg gaggtagatt ctgcatcaaa atataaaatg
     1501 gcattaccaa tgggaatttt tgaactagct gattatacag gacttgatgt tatccataag
     1561 gcaacttttg aaatgtattc aagagataaa aaggtaatat ttcctcatcc aaaaattcaa
     1621 caattgtacg agaacaaaga attgggacaa aagactggta agggatttta tccataccaa
     1681 ggagaaaatt atgagagagt acaattaaca gaagaagcag ctgcaaaatt tgatccaatt
     1741 cctttagtat ctgtcgccgt taacaatgca tcatggttaa tatcccatgg tgtatgtacc
     1801 agagaagaac tggaaaaagc gttaaagtta ggtatgggct taaaaagaga gctttttaat
     1861 actgctgaaa caataggaat agaaaatata ataaatacac taaaagattt acagtcacaa
     1921 aatgaaacat tttatgaacc tgataagtat cttttatcat tacaaaaata ataataatgt
     1981 tgctaaaaaa gtaatacaat aattataatt tttcaatata ctctttttta tttttatttt
     2041 tatttgatat tatttggtta ttattaatta tatct
//
LOCUS       DATIAS010000072         2070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1377044, whole genome shotgun sequence.
ACCESSION   DATIAS010000072 DATIAS010000000
VERSION     DATIAS010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377044"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            521..>2070
                     /locus_tag="VLA74_01400"
     CDS             521..>2070
                     /locus_tag="VLA74_01400"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF49388.1"
                     /translation="MENQSYYSLKTDKTEYVSGETIKISGTTNNSTINIQVYDPSDRL
                     LSSVFLDAYSNNFTYHMKLSNKNSSGNYKIRSILDDRQEKLHKIKFFADNYGDIEIMI
                     PGYNEPKTFSKQICAISSENVKITWKNMDSDLHTATSFDQHTGMPDGKFDTGFIGPHN
                     VSTLTIDLLNNEKIYYFCKLHPWEKGVLYRGDWDASSNDLHRFDSVHQTISKEETKKL
                     NILLRHLDPSEIDSLKFDNVSNITTRLLTIVFWDISGFSKACRPLDVSSDLLLNFLKD
                     YFDTAKEIISKYGGLRDKFIGDGVMALFGMQRREYDGAHIAKNAVLAALEFRTKFQDI
                     KSKWMDQWKRFILDLDDLNNIDLKCGINTGRVISGNLGALCGLDQITAIGTHVNLASR
                     FCDLAKGGQILVSSTTKNHIERSFEINHIGNYPIKNIGKYDVFEIIGTSSLGQDPVIQ
                     VLELGHGEIVDWKIAPKIVRGEPTKIFAKFLGSVEFGFFTFCITDSIGQVRFFEDKSS
                     IDTYLNIG"
BASE COUNT          758 a          294 c          359 g          659 t
ORIGIN      
        1 atgtatacaa tcaaaatatt tatatactat ggggccagtg ggatgtgaaa caaatttgac
       61 ctattttttg gtcccacttt aaaactgaat tactaaaata atacatattt caattatgta
      121 ataaattgat caagaatcta atacaagtaa tacaaagaat acattactac aatagtagat
      181 gtcttatttc tttcaaataa tcaaataacc aatagattaa aaatagaaca ttcacagcta
      241 aatttattcc cataaagtaa catgactaca taatttaata caaatctttt tcaatgtaca
      301 atgatataat atttgaaaat tatttcataa cctaattgaa tgagagatga atttatctta
      361 gtttatcaga gtcattctat tatttaaatg ggaaatatag gtgagacatt tgttaagatc
      421 taatattaag tccataaaaa aattggtaat atactgaaat tactacaaaa gaaaaatcta
      481 tttactacca ttaaataaga tctataaagg tgcgagttaa ttggaaaatc aatcatacta
      541 ctccctcaaa acagacaaga ccgaatatgt ttctggagaa acaattaaga taagtggaac
      601 taccaataac agcacaatca acattcaagt ttacgatcca tctgaccgtt tacttagttc
      661 agtatttttg gatgcctatt caaataattt tacttaccat atgaaactga gtaacaagaa
      721 ttcttcagga aattataaga ttagatctat tttggatgat cgtcaggaaa aattacacaa
      781 aataaaattt ttcgcagaca attatggaga tattgaaatc atgatacctg ggtataatga
      841 gccaaaaact ttttcaaaac aaatttgtgc catatctagc gaaaatgtaa aaattacctg
      901 gaagaatatg gattctgatc ttcatactgc cacatcattt gatcaacata ctggtatgcc
      961 agatggtaag tttgatactg gttttatagg acctcataac gttagtacgt taacaattga
     1021 cctattaaat aatgagaaaa tatattattt ttgtaaactt catccttggg aaaaaggtgt
     1081 attatatcgt ggagattggg atgccagtag caacgattta cacagatttg attctgtaca
     1141 tcaaactata agcaaagagg aaacgaagaa actaaacata ttgcttagac atttagatcc
     1201 atctgagata gactcactca agttcgataa tgtaagtaat attactacta ggcttcttac
     1261 tatcgtgttc tgggatatta gtggattttc taaggcgtgt cgtcctttgg atgttagctc
     1321 tgatttacta ttgaactttt tgaaggatta ttttgatact gccaaggaaa ttataagcaa
     1381 atatggaggt ctaagagaca aattcatcgg cgatggggtg atggctcttt ttggtatgca
     1441 gcgcagggaa tatgatggag cacacatagc aaaaaatgca gttttggctg ctcttgagtt
     1501 tagaacaaaa tttcaggata tcaaatcaaa gtggatggac caatggaaga gatttattct
     1561 tgatctagat gacttaaata atatagattt aaagtgtgga ataaacaccg gccgtgtaat
     1621 atcaggaaat ctaggtgcat tatgtgggtt agaccagata accgcaatag gcactcacgt
     1681 taatttggct agcagatttt gcgatcttgc caaaggtgga cagattctcg tgtcttcaac
     1741 tacaaaaaat catatagaac gcagcttcga aatcaatcac attggtaact atccgatcaa
     1801 gaatatagga aaatatgatg tatttgaaat aataggaaca tcgtcattgg gacaagatcc
     1861 tgttattcaa gttctcgaac tgggacatgg agaaattgta gattggaaaa tagcacctaa
     1921 aatcgtacgt ggtgagccga ctaaaatctt tgctaaattt ttgggaagtg tagaatttgg
     1981 attttttact ttttgtataa ctgattcaat tgggcaagtt cgattttttg aggataagtc
     2041 aagtatagat acttatttaa atattggaaa
//
LOCUS       DATIAS010000073         4278 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1922132, whole genome shotgun sequence.
ACCESSION   DATIAS010000073 DATIAS010000000
VERSION     DATIAS010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4278
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922132"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..1894
                     /locus_tag="VLA74_01405"
     CDS             47..1894
                     /locus_tag="VLA74_01405"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HSF49389.1"
                     /translation="MKKNVELTKVKHKKDSFAKPTKEKWGLEKETDNFANKVKLYRQG
                     KLSDDDFRRFRLQHGAYGSRLRPDYSMIRIKVPGGEITPEQLEKIANLSEAFSIGSAH
                     VSTRQNIQLHWVQLEDVSEVMRGLVEAGLTTREACGNTVRNVMCSHFAGVCPEEVFDA
                     TPYSMAIAKFLLRNPLCQNLPRKFKINFGCCSKHGLVSIADIGLIPDLRYGKKGFRIY
                     LGGGLGAASFIGHLLEEFTPEEQVLSTCMATIRLFDRLGNRDNMARNRMRYLVNEMGW
                     EKFQKMVLKERAIVEATISEFTKNLYQVHFNNDSYVPIKKPLTKFNKLPVIETNNISD
                     TGNGYDRWFQTNVVSQKQEGYSTVFITLGAGDITANQLRSLASIIREFSSESVARNTP
                     QQNFAIRYVYYTDLPLVYKKLMAIGLANPGALTITSAVGCSGTTSCNLAITNSHRLAK
                     EVQRTLLELGFDVDNDLRNSTIKISGCPNSCGQHEIATIGFFGGAARIGNSMAPVYTM
                     LFGGNGSEDGKLGKPIMRVPAKKVIEVVQKIVELYKNEKLPSETLDMWIDHIINSSGT
                     GNIKNIEDIKILLTPVAQLPPFEQGQEFYQDYGNDVKFSAKTARGECAA"
     gene            1891..2892
                     /locus_tag="VLA74_01410"
     CDS             1891..2892
                     /locus_tag="VLA74_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSF49390.1"
                     /translation="MIQKVKVISKNKKANQQKELGNHDIQSKVKDIKIKNSILKQKNK
                     NKNTTTITTTKTLPQFKMKRTTSAAYKLPIVCDVDTLRTLIRKKAEVRVVDVRRIEDY
                     KKGHIPTAVSLPLAVLLSNDSPEQIAKLLEGLGISDKIPVVVYDDTFGALAARVAWTF
                     QYVGHENTSLLEMTYTNWKNLGLEIEKHNNKFPKTTHSLKLNPSIYADATYVESIQNN
                     PDKIIVDSRERLNFLTEHIPSAKNIPYTMLGNDNHILRPVDEIKRFVQNRGIPPDSEI
                     ITYCGSVGTLSGLAFYALKLAGIQNVKLYSKSFKDWKSLGKPKTEFKDANYWDLSAE"
     gene            complement(2966..3361)
                     /gene="hsp14"
                     /locus_tag="VLA74_01415"
     CDS             complement(2966..3361)
                     /gene="hsp14"
                     /locus_tag="VLA74_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal heat shock protein Hsp14"
                     /protein_id="HSF49391.1"
                     /translation="MGIGTYMAKEVIREINNKSKEFYEFILPPVDMVEDGNDLLVTID
                     LPGFNKNDIILRINKNILSIKANKPDNEYRGTVYLNHRPTKIDKKILLPFSVDDDDDD
                     EITGTANYTDGIITLRIPSKNLGNRIQIS"
     gene            3461..>4278
                     /gene="truD"
                     /locus_tag="VLA74_01420"
     CDS             3461..>4278
                     /gene="truD"
                     /locus_tag="VLA74_01420"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: protein motif:HMM:NF013322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HSF49392.1"
                     /translation="MRKSVPEVDFYSGVECYCTNFKGINGTIKKTNEEFQVSEIIDYT
                     FLKPPNFSLDQNNEHKFPLYLLEKHNIDSNHAIIEIKKKSGLKLRVLGIKDAKAETSQ
                     YASCEQTKNLPRYVITPKTKLTLRGFLRTPLSKSALIGNSFKIKINEAYDNDIQPFLL
                     ELNNIANFYGLQRFGSERMVTHLVGKALLHRNYNKAIEYLLSYTSKYDSKFSKEIRER
                     IRDPKNYQKLIKILPKGMDLERNILSTIMKGKESIAVIRSIPINIRRLFVQAYQS"
BASE COUNT         1575 a          593 c          705 g         1405 t
ORIGIN      
        1 tgtgattcca taaaaaatat aaggttttgt ataaatgatt aatatattga aaaagaatgt
       61 ggaattaact aaagttaaac ataaaaaaga ttcttttgct aaacctacta aagaaaaatg
      121 gggattagaa aaagaaactg ataattttgc taataaagtt aaactctata gacaaggaaa
      181 gttatctgat gatgattttc gaagatttag gcttcagcat ggagcatatg gatcgagatt
      241 aagacctgat tatagtatga taaggattaa agttcctggc ggtgaaatta ctccagagca
      301 actagaaaag atagctaatt tatctgaagc attttctatt ggatctgccc atgtttcaac
      361 tagacaaaat atccaattac attgggtaca attagaggat gtcagcgaag taatgagagg
      421 attagtagaa gcaggattaa caactagaga agcttgtggt aatactgtaa gaaatgtaat
      481 gtgtagccat tttgctggag tttgtcctga agaagttttt gatgctactc cttattcaat
      541 ggcaattgca aaattcctat tacgcaatcc actttgtcag aatttaccaa gaaaattcaa
      601 aataaatttt ggttgctgta gtaaacatgg tcttgtaagt atagctgata ttggtttaat
      661 tcctgattta agatatggaa aaaagggatt tagaatttat cttggaggag gattgggtgc
      721 tgcctcgttt ataggtcatt tattagaaga attcactcct gaagaacaag tcttatcaac
      781 ctgtatggca accattagat tatttgatag attaggaaac agggataata tggccagaaa
      841 tagaatgcgt tatttagtaa atgaaatggg ttgggaaaaa tttcaaaaaa tggttttgaa
      901 ggaacgtgct attgtagaag cgactatttc tgaatttact aagaaccttt atcaagttca
      961 ttttaataat gattcatatg ttccaataaa gaagccacta acaaaattta ataaactccc
     1021 tgttatagaa acaaataata tttctgatac aggtaatggt tatgatcgtt ggtttcagac
     1081 aaatgtagtc tcacaaaaac aagaaggcta ttctacagta tttataactc ttggagcagg
     1141 tgatataaca gccaatcaat tacggtcttt agcatccata atacgtgaat tctcctcaga
     1201 atctgttgca agaaatactc cacaacaaaa ttttgcaatt agatatgttt actatactga
     1261 tttgccacta gtttataaaa aacttatggc tattggatta gctaatcctg gtgctcttac
     1321 aattacttca gcagtaggtt gttctggtac tacttcttgt aatttggcta taactaattc
     1381 gcatagatta gctaaagagg ttcaaaggac attattggaa ttaggttttg atgttgataa
     1441 cgatcttcgt aattcaacta ttaaaataag tggttgtcct aactcctgtg gacaacatga
     1501 aattgcaact attggctttt ttggtggtgc tgcaagaata ggaaattcta tggctcctgt
     1561 atatactatg ttatttggtg gtaatggttc tgaagatgga aaacttggta agcctattat
     1621 gcgtgtgcca gcaaaaaaag tcatagaagt agtgcagaaa atagtggaat tatacaagaa
     1681 tgaaaaatta ccatcggaaa cattagatat gtggatagac catattataa atagtagtgg
     1741 aactggtaac ataaaaaata tagaagatat aaaaatcctt cttacaccag tggctcaact
     1801 acctccattt gaacaaggtc aagaattcta tcaagattat ggtaatgacg ttaaatttag
     1861 tgcaaagact gctagaggcg aatgtgccgc ttgattcaaa aagtaaaagt gatttcaaag
     1921 aataaaaaag ctaatcagca gaaagaactt ggtaatcatg atattcaatc aaaggttaag
     1981 gatataaaga taaaaaactc aattttaaag cagaaaaata agaataagaa tactactact
     2041 attaccacta caaaaacact accacaattt aaaatgaaaa gaactacttc tgctgcctac
     2101 aaacttccta ttgtatgtga tgtagataca ttacgtacat taattcgaaa aaaagcagaa
     2161 gtacgagttg tggatgttcg tagaatagag gattataaaa agggacatat tcctactgca
     2221 gtatcattac ctctggcagt attactctca aacgattcac ctgagcagat tgccaaatta
     2281 ttggaaggtc ttggtatctc tgataaaatc cctgtagtgg tatatgatga tacttttgga
     2341 gctttggcag cacgtgttgc ttggaccttt caatatgttg gccatgagaa tacttcactc
     2401 cttgaaatga cctatacaaa ttggaaaaat cttggcttgg aaattgaaaa acacaataat
     2461 aaatttccaa aaactactca ttctcttaaa ttaaatccat ctatttatgc agatgctaca
     2521 tatgttgaat ctatacaaaa caatcctgat aagatcatag tagattcaag agaaagactc
     2581 aattttctaa cagagcatat tcctagtgca aaaaatattc cttatactat gttaggtaat
     2641 gataatcata tcttacgacc ggtagacgag ataaaacgtt ttgttcaaaa tagaggaatt
     2701 cctccggact ctgaaataat tacatattgt ggaagtgtag ggacattatc tggtcttgca
     2761 ttttatgcat taaaattagc aggtatccag aatgttaaat tatattctaa atcctttaaa
     2821 gattggaaat cattaggaaa accaaaaact gaatttaaag atgccaacta ttgggattta
     2881 tcagcagaat aatctataaa aatttatttt aatttatttt tttggctgta tctaaggatt
     2941 tcaaattcac tataggcttt atttattagg aaatttgtat tctatttcct aaattcttgc
     3001 tgggaatcct caatgttata attccgtcag tataattagc cgttccagta atttcatcat
     3061 catcatcgtc atcaactgaa aaaggtaata aaattttctt atcgattttt gtaggtctat
     3121 gatttaaata aactgtacct ctgtattcat tatccggttt attggcttta atagaaagta
     3181 tatttttatt tattctaaga attatgtcat ttttattaaa tcccggtaaa tctatagtta
     3241 caagtaaatc attaccatct tctaccatat ctactggagg taaaataaat tcataaaatt
     3301 ccttggattt attattgatt tctcttataa cttctttagc catatatgtt ccaataccca
     3361 taattattaa tattattgtt tgaatataaa tcctttattt attttattga ttgatataat
     3421 tgttgtattg tttatattta atttgatata ggttaatttt gtgagaaaat ctgtacctga
     3481 ggtagatttc tatagtggtg tagaatgcta ttgtacaaat ttcaagggta taaacggaac
     3541 aataaagaaa accaatgaag aatttcaggt atctgagata atagattata catttttaaa
     3601 accaccaaat ttttctttag atcaaaataa tgaacataaa tttccacttt atttattgga
     3661 aaaacataac attgactcaa atcatgcaat aattgaaatt aaaaaaaaat caggtttaaa
     3721 acttagagta ttgggaataa aagatgcgaa agcagaaact agtcaatatg ctagttgtga
     3781 acaaactaag aatttaccta gatatgtaat aacacctaaa actaaattaa ccttaagagg
     3841 cttcctacgt actccactat caaaatctgc acttattgga aatagcttta aaataaaaat
     3901 aaatgaagcc tatgataatg atatacagcc ttttttattg gaattaaata atattgctaa
     3961 tttctatggg ttacagagat ttggaagtga aagaatggta actcatttag ttggtaaagc
     4021 attacttcat agaaattata ataaagctat tgaatatctt ctctcatata cttccaaata
     4081 tgattcaaag ttttcaaagg aaatacgaga aagaattaga gaccctaaaa attaccaaaa
     4141 attgattaaa attttaccta aaggaatgga tttagaaaga aatattttaa gtacaataat
     4201 gaaaggtaaa gaatccattg ctgttattcg atctatacca ataaacataa gacgactctt
     4261 tgttcaagct tatcaatc
//
LOCUS       DATIAS010000074         3021 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_832065, whole genome shotgun sequence.
ACCESSION   DATIAS010000074 DATIAS010000000
VERSION     DATIAS010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3021
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832065"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2825..>3021
                     /locus_tag="VLA74_01425"
     CDS             2825..>3021
                     /locus_tag="VLA74_01425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49393.1"
                     /translation="MNSSHLRIFKSFSIFLFVSSIILIVNISSFSVNALSDQIALKKI
                     LLIADEKILKISPDNVFHPGG"
BASE COUNT         1041 a          383 c          422 g         1175 t
ORIGIN      
        1 actattgcca atacttgaga ttaattaatt aattatgcta tggcggatca tgattctttc
       61 cttccttgga gaagaataag taaatttata atgaaaatta tgatatttga taacttaaga
      121 caatttatta gtataaaaga agaataatga gccacgacct tctaattaac accactaata
      181 aagatagtag agaaggctat cgccttgtgg acatcatctg tatttttggt ctgttgttat
      241 tgtagagtat tttgctaatt aactattcaa gaaatttggg aaaatatagt ttattattta
      301 gttagttagt aaattattgt catagcctga actagtatta tagtgatcgg gtttatagat
      361 acatgtccag gctatgatat agtggagacg agaatggctc acaattattt ttcctatgat
      421 gttttgtgta tgtttgtgta tgtagttgtg ttttcaatac ctaaagacta tgatatttat
      481 caattatgaa actattcttc aagagattta taaacaatat tgctagaata atcaattaat
      541 ttttagttat ttattgtcat agcctgaact aactcatgaa aaatatctag acaagttgtc
      601 gtccagacta tgacaattga ttaaagacga ctttttttct actatattga tagatttcct
      661 atgcatccag gatcttcttt ttttggtaat tagaagatca agaatatcta atgaaattat
      721 tatttattat ttgtgaaaat ttctatttgt ataaattata gtaaaatagt atgaataata
      781 ttctcttgat atatctatca gattgaaaaa tgaattgagt gttaaaggaa gaatgctatg
      841 ccctctaaca ttcaaaccct cgatttgcac atagaaaaag aatttgtaca tattattact
      901 tttactaaga taaaagacgg ttcattacag attaagtaag aataaataac aataaattta
      961 atttctagaa aaagtaaaaa aactgattaa ttcatttcat tttacttttt tggtcttgac
     1021 ttgtttgtct tgttggtaga gaggttaggt atattacata ttctaatcgt aaattataag
     1081 caatcatatg gatattatat tggtcttaaa aaatatagat agagttggat tattctgtta
     1141 tgttttattc ttctattctt cgtcggaatt ataactaata aactactaga taaataaact
     1201 atatatgagt ttgggtcata attcaatgat taaacaagtt tcaggatcct aacaatagag
     1261 tactactaac aactacaata ctactgctat tactaaattc ttgtatttct ggcctgttaa
     1321 tatgttggag ttgatgatga gagttgtttt tcacaccaat acatcatctt cgatagaaga
     1381 agagtattat agcttattta tatatattaa aaataatata atggtatatt tctaacctag
     1441 tcccaattac tatatatcgt ttacatttta tattcttcaa tggtagtagg aatctatcta
     1501 ctatatagat tagtccacta atccttcaat gttatagtgt gataatatct tgatagtgat
     1561 gatggttatg acgatagaca caattgtgat aatgattgac agcaagagaa aaataatagt
     1621 gattgattaa ggtttgatag tctctacaat taatagcgat tgtataaaca atgataacgt
     1681 ttgtgactgt tgttatgaca taaagtgata gtgattaacg cactaacgtt tctaaaatga
     1741 tagtgatagt agctactctc tatatttctt atcaactttt cataaagatt tttattagat
     1801 ttaaaagaat tttatattct taaaaaacac acggaacacc attgacaaat aatttttctt
     1861 tgaaatcatc tgttaaatga tctagggtag tgattttggc tattgtgtta tttgtactac
     1921 tagactacat ttttttagtt ataatgtata tatgtatgta tgaatgaaca attctaacca
     1981 atactaattt ttttgataaa tttatcacta aatattaaaa aatttattaa aagtattgat
     2041 tattctaaaa taactcatat ctttattcta ttttttttag ttattttaca aacatcaacc
     2101 tacccacatt cctatatata ttttttaatt ctctttgtta catgaatttt caagcctaca
     2161 tttagattca atatccataa gagacgtaga aacgtccatg catcaccaat cttcattttc
     2221 aagcctaata gtcagtcaga tttcacttcc tcctaaaagt gttcttctgt cgtaaaaaga
     2281 cgttgttgac tagcaattta tttattttaa atgtcattaa aattggtctt gaatcttgga
     2341 attttgttgt atcgacgtta gggaccatca tttcgcctca aatttcgcag atagattata
     2401 acagcgtact atttcattgc cgtaacaacg ttagttagca tttcaattgt ttcgagccta
     2461 actttgttat tatattattt ttcaaacagt cattgttaaa gaggtacatt tttgaatttt
     2521 ctactactat tgcctgtgga aaatatttga aaaagaaaat actatatata ttttttatat
     2581 cagtagaagt ttggttatta aattattatg acccagtcaa ctatctacaa taattgataa
     2641 catacaaaga gatggacttc tcaaaccaaa agagaataag taattacttt agcaattcat
     2701 tgaatttaag aacaagataa agattcgata tctaacatat ttaggggaca tttttagcta
     2761 ttatgatggt ttttacagag ataatagatt cgtttattat tatgtaataa caatttatct
     2821 ggtaatgaat agttctcatt tgaggatttt taaatctttt tcgattttct tgtttgtttc
     2881 ttctattatt ttaattgtta atatttcatc tttttctgtt aacgctttat cagatcaaat
     2941 agcattaaaa aaaatccttt taattgcaga cgaaaaaata ctcaaaatat ctcctgataa
     3001 tgtttttcat cctggcggta t
//
LOCUS       DATIAS010000075         3615 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1922474, whole genome shotgun sequence.
ACCESSION   DATIAS010000075 DATIAS010000000
VERSION     DATIAS010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922474"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VLA74_01430"
     CDS             complement(<1..432)
                     /locus_tag="VLA74_01430"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSF49394.1"
                     /translation="MTNNRQQLPPGPQLSFSEFMDKVNENPFNFLMDLIQKYGDIIYL
                     KLQQKNAYILSNPDYIEQIFTRDYKLFSKSRAAELRPFLGNGLLLNEGDSHRQHRKII
                     QPLFLPKSIKSYSNIMVDNIKHISDNWQDNTTIDVLQEMTML"
     gene            complement(530..1021)
                     /locus_tag="VLA74_01435"
     CDS             complement(530..1021)
                     /locus_tag="VLA74_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49395.1"
                     /translation="MKLDVYTKFTLVVLIVLSLSISIIHFENAKAQTISSTDPKELLK
                     EFKTGKDSIQKDIQINFDQLINEVKSQLNFSSVDSHLSLASQNFINGRIAEGLSELKS
                     ANEEWKNSSMTIIKIGGDFISIAKNNSTSMNDSTREILDNFGNILVNIGKKIENLRIQ
                     LSN"
     gene            1212..1802
                     /locus_tag="VLA74_01440"
     CDS             1212..1802
                     /locus_tag="VLA74_01440"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HSF49396.1"
                     /translation="MNKSVRWVRATQIVLGALAILLAIVALTNSGLTILLILIAIVLV
                     IAGFEKTITGLFIAHNLRFFTIGLGVLTIILAGLALTYPIAAARVLLLILGFSLMVDG
                     FSRIADGLTNKSDKRLVRGFTIAVGILAIIISVGINIIPFWGKLFISKLIAVDLIIIG
                     IQMITTGTVNVEDGKKKVKEKVKKIFQRHEQSEEKK"
     gene            complement(2215..2502)
                     /locus_tag="VLA74_01445"
     CDS             complement(2215..2502)
                     /locus_tag="VLA74_01445"
                     /inference="COORDINATES: protein motif:HMM:NF013422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49397.1"
                     /translation="MLFEDVENLNSIDYALKELDKGTSDIFIYTDAKKFNKPVTIIQG
                     LKDKDMVKTILRELKKSIGTGGTYKNGIIILQGNHYGYVKEYLINKNIMKK"
     gene            complement(2843..>3615)
                     /locus_tag="VLA74_01450"
     CDS             complement(2843..>3615)
                     /locus_tag="VLA74_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSF49398.1"
                     /translation="DHARRLKVTFNDGKTFNAKVIGTDKLTDLAVLKIENHDNNNAID
                     SFSSIELGDSDSLRVGQIVIAIGNPFGLTGGPTVTTGIISSLNRNIEFEEGMLELVQT
                     DAAINPGNSGGPLVNTNGQVIAINTAKIPYAHGIGFAVPVNTAKTILQELIQYGKVNR
                     PWLGVSTIKITNRIARYYRLPTNEGALVVKVEEYSPAADAGIRPGDIIEEVDEKRIEE
                     ITDLSSRIKKKKANENTTLSVNRYGRRFNISVTLENQP"
BASE COUNT         1203 a          509 c          498 g         1405 t
ORIGIN      
        1 caacatagtc atctcttgta atacatcaat tgtagtatta tcctgccaat tatcagaaat
       61 gtgttttata ttgtcaacca tgatattgct atatgacttg attgatttag gtaaaaataa
      121 tggttgaata attttcctat gttgtctatg tgaatcacct tcatttaaca atagaccatt
      181 acctaaaaaa ggtcttaatt ctgccgctct tgatttagaa aatagcttgt aatctctggt
      241 aaaaatctgt tctatataat caggattact taaaatatat gcattttttt gttgtaactt
      301 taagtaaata atatctccat atttttgtat taaatccatt agaaaattaa aaggattttc
      361 attaactttg tccataaatt ctgaaaaaga aagctgaggt cctggaggaa gttgttgtct
      421 attatttgtc aataagactg aaatttcata ttactttata aaaattactt ttctaaaacc
      481 tcataatttt tcaaaatgta tagtaattgt acataaatgt aaatacatat caattagata
      541 gttgaattct taaattttca attttctttc caatgtttac taaaatatta ccgaaattat
      601 ctaaaatttc tcttgtacta tcattcatag atgtcgaatt atttttagca atagaaataa
      661 aatcgcctcc aattttaata attgtcatac tagaattctt ccattcttca tttgcagatt
      721 ttaattcaga caatccttca gctattctcc catttatgaa attttgagag gctaatgaaa
      781 gatgtgaatc aacagaacta aaatttagtt gtgatttaac ttcattaatt aattgatcaa
      841 aatttatctg aatgtctttt tgaatactat cctttcctgt tttgaattct tttaatagtt
      901 ccttaggatc agttgaacta atagtttgtg cttttgcatt ttcaaaatgt attatagaaa
      961 tggaaagact gagaactatt aaaactacta aagtaaattt tgtatagaca tctaatttca
     1021 taacgttaaa aactcaataa ttgtatttat tttcgatggt ttcagattta attatgtgag
     1081 taaattgaaa attaatgatt tgagatttgt attatataat gtaacgctgc ttcattgtta
     1141 attctgaaca gaatgtatta attattagaa tgtagaactc tattaagtaa aggtctgtaa
     1201 tagcagtaac tatgaataaa tctgtaagat gggtgagagc aacacaaatt gtacttggtg
     1261 ctttagctat cttacttgca attgttgcac taacaaattc aggtctaact attttgctca
     1321 ttttgatagc tatagtctta gttattgcag gatttgaaaa aactattact ggcttgttta
     1381 ttgctcataa cttacgattc ttcactatag gattaggagt attgactatt attctagcag
     1441 gattagcgtt gacatatcct atagcagctg ctagagtact tttattaatt ttgggatttt
     1501 cattgatggt agatggattt tcacgtatag ctgatggatt gaccaataaa tctgacaagc
     1561 gattggttag aggatttact atagcagtag gaatattagc cataataatt tctgtcggta
     1621 ttaatatcat tcctttctgg ggtaaattat ttattagtaa attaatagca gtagatttga
     1681 taattatagg aatacagatg attacaaccg gaaccgttaa tgtagaagat ggaaaaaaga
     1741 aggtaaagga aaaggtaaag aaaatctttc aaagacatga acagagtgaa gaaaagaaat
     1801 agcatttaaa ggaatttctt gtaaattatc ttgaaaaatg aggatactat agactttgat
     1861 ctttatttat atacaaagca ggttatagat aatatgtttt aaataactca aaaatctttt
     1921 tgtatattta atttctctat atattggcta ggttcaaagt tattatattg ttgagatttg
     1981 aaattatgta taaaataatt ataaaaatac aaaaaaattt gaataataaa tttgattctt
     2041 aaatcttatt atttcaacat gttcatatct gtttggtccc gttgactaaa tgggctcaat
     2101 aactaaagtc aaagcttaga gggcttcgag tatgacatgt aattgggatt ggtaaccttg
     2161 tatttaattt tagtgtcttc aaataaagaa tctaaccata attatcttca tctatcactt
     2221 tttcattatg tttttattga taagatactc ttttacatat ccgtaatggt taccttgtaa
     2281 aataataatt ccatttttat aagttcctcc agtacctatg cttttcttta actctcgtaa
     2341 gatagttttt accatgtctt tatcctttag accttgaata attgtaactg gtttattgaa
     2401 cttttttgca tctgtatata tgaaaatatc ggatgtacct ttatccaatt cttttaaagc
     2461 ataatctata gaatttagat tttcaacatc ttcaaacaac aaataattaa tgtatttgta
     2521 atatatatat tgactaattt tcttttttca agtcatacca ttctatttta caatttagtt
     2581 aatgttttgt ctaaaatttc tctctagctt tccagataag atttttagaa tatctatata
     2641 agtttgccga aagtcaattg atagatatgg aattatcatc atatactttc tgtttacctt
     2701 ataaagaagg tagcaaaata gccaaattat cattgcatat gttatttttc tttcagttta
     2761 gtttacatag aagagtaaca tattgatatt tccatatcac cttactaatt aataagtaaa
     2821 atatattaat aaaaaaagag aattatggtt gattctctaa tgtcactgaa atattaaacc
     2881 ttcttccata cctatttaca gataatgtcg tattttcatt agccttcttc tttttgatcc
     2941 gtgaagaaag atctgttatt tcttctatcc tcttttcatc tacttcttca ataatatctc
     3001 ctggtcttat tcctgcatct gctgctggac tgtattcttc tacttttaca actaatgcgc
     3061 cctcattagt cggtaatctg taatatcttg ctattctatt cgttatcttg attgtagaaa
     3121 cacctaacca tggacgatta acttttccat attggattag ctcttgtaat attgtttttg
     3181 ctgtattaac aggaacagca aatcctattc catgagcata agggatttta gcagtattga
     3241 ttgcaattac ttgcccatta gtatttacta aaggtccacc agaattgccg ggattaattg
     3301 ctgcatcagt ttgaactaat tctagcattc cctcttcaaa ttcaatattt ctatttagtg
     3361 aactgataat tccagtagta acggtaggtc ctccagtcaa accaaaagga ttgcctatag
     3421 ctatgactat ttgaccaact cttagactat cagaatctcc taattcaata gaagaaaaag
     3481 agtcaattgc attattattg tcatgatttt cgatttttaa tactgcaaga tcagtgagtt
     3541 tatctgttcc tattacttta gcattaaatg ttttaccatc attaaaagta acttttaatc
     3601 ttctggcatg atcta
//
LOCUS       DATIAS010000076         3273 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_832707, whole genome shotgun sequence.
ACCESSION   DATIAS010000076 DATIAS010000000
VERSION     DATIAS010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832707"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VLA74_01455"
     CDS             <1..759
                     /locus_tag="VLA74_01455"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HSF49399.1"
                     /translation="PVISTAAAFRYENDVPILIPGINDDHIELLNVQKKNRSWEGYIC
                     PLPNCTTTGLAITLKPILDSFGIKSIFMTSMQALSGAGRSPGVIALDIIDNVIPFIPK
                     EEEKVQVETKKILGTLINDSISSSNIKVSCTCTRVPVMDGHTETVFVETTNYSDPEQV
                     KESMIKFSKSIKIKDLPSSPSEYIIVHDDPTRPQPRIDREINDGMTTFVGRLRKDTVF
                     DNGIKYVLLSHNEKMGSAKGAVLLAELLKTKNML"
     gene            855..1739
                     /locus_tag="VLA74_01460"
     CDS             855..1739
                     /locus_tag="VLA74_01460"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HSF49400.1"
                     /translation="MPEVTVVNRVKNYYELTKPKIWYLLVFTAFGSALTASFLFDIQL
                     SPLTWILLLAGVAAGSAAADTLTGYNDRDIDAIMDRTKDRPIPSGRISPKNALVFGLA
                     LTAIALIFSWFINIWAFLLMLFGLFDNIIVYSKWLKRRSQFNIILGGFSGGAPALIGY
                     VTVTTQNIEIGLIMAALVFLWIPTHIWSLALHVRKDYQKAKIPMLPVVSEEKKSVRII
                     AGTTLLMVLSSMLPFFFNQFGQIYLITVSISGVIMMGLSLWLLLKPTEKASWTVFKFS
                     SPYLTAVFIAFMVDAFFH"
     gene            1838..2356
                     /locus_tag="VLA74_01465"
     CDS             1838..2356
                     /locus_tag="VLA74_01465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49401.1"
                     /translation="MSADHETDSTIENIKSWEVEWSSSVEEFDDYSKALDLFNLKSNQ
                     GEETILYEIQKSKLDGSIVKKIPILNTKQSKKRKEELEKQSQKQIPQQKKQQAATQSK
                     NKIGDIKYRIIILVIIVIAFLILLYVLSQLVTSSTRLDSHFLLSSLINNNIDFSLISF
                     YSFNLFQQLLIE"
     gene            complement(2534..>3273)
                     /locus_tag="VLA74_01470"
     CDS             complement(2534..>3273)
                     /locus_tag="VLA74_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49402.1"
                     /translation="HNAIYHEQILKELGKHYDINLDKALRDLIDDGIIMLIESKKKKK
                     YIVNFESLSEAHMIINIDKNIKVQKEKAKKTPDYDNVNYMDSIYEKKIVQPFLPEPSG
                     YIYWFDNEEYRKFKNQTVYRIYFKETDRMNFAAQLITKPIGSSKIIYMGSLNDPNSYI
                     ARLWRAVISVSEENKGGTFILQEIQDKDRIACGNNRQRGKIALSIFKKLGYIQQSEFK
                     GNSIRFKVSGKKPYSITLDEIFNLKSK"
BASE COUNT         1137 a          479 c          468 g         1189 t
ORIGIN      
        1 cctgtaatca gtactgcagc tgcatttaga tatgaaaatg atgtaccaat actaattcca
       61 ggaataaatg atgatcatat agaattatta aatgtacaaa agaaaaatag aagttgggaa
      121 ggctatatct gtccacttcc caattgtact acaacaggat tagcaattac attgaagcca
      181 atacttgata gttttgggat taaatctatt tttatgactt ctatgcaggc tctctctggt
      241 gcaggaagat ctccaggtgt tattgcactt gatataatag ataatgttat accttttatt
      301 ccaaaggaag aagaaaaggt tcaagtagag actaaaaaga tcttaggtac cttaattaat
      361 gattcaattt cttcatcaaa tatcaaagtc agttgtacct gcacaagagt acctgtaatg
      421 gatggacata ctgaaactgt ttttgttgag acaacaaact attccgatcc ggaacaagtt
      481 aaagaatcta tgataaagtt ttctaaatct ataaaaatca aagacctacc ctcttcgcca
      541 agtgaatata taatagttca tgatgatcct actagacctc aaccaaggat tgatagagaa
      601 attaatgatg gaatgactac gttcgtaggt agattaagaa aagatacagt atttgataat
      661 ggtataaaat atgtattgct ttcccataat gaaaaaatgg gttctgcaaa aggcgcagta
      721 cttttagctg aattgctcaa aactaaaaat atgctttaac tttttttatt tcttttaatt
      781 ttgatttgaa gatataaata taaaaacgta tgataactta ggttggttaa taacgagttg
      841 atatttaaat agtgatgcct gaagtgactg ttgtaaatag ggtcaaaaat tattatgaat
      901 taacaaaacc aaaaatatgg tatttattag tatttactgc ctttgggtca gctttgactg
      961 cttcttttct atttgatata caactaagtc ctttgacttg gatattactt cttgcaggag
     1021 ttgcggccgg ttcagctgct gctgatactc ttactggtta taatgatcgt gatattgatg
     1081 ctataatgga tagaactaaa gatagaccca taccatccgg aagaatttct ccaaagaatg
     1141 ctctagtctt cggtttggct ttaactgcta ttgcattaat attttcatgg tttattaata
     1201 tatgggcatt tttattaatg ttatttggtt tatttgacaa tattatagtt tatagtaaat
     1261 ggctaaagag acgtagccaa ttcaatatta ttctcggtgg tttttcagga ggtgcaccag
     1321 cattaattgg atacgttact gtaacaactc aaaatataga aataggttta attatggctg
     1381 ctctagtatt tttatggata ccaacacata tctggagttt agctttacat gtgcgaaaag
     1441 actatcagaa agccaaaatt cctatgttgc cagtagtttc tgaagagaaa aaatcagtaa
     1501 gaataattgc gggaactact ttgttaatgg ttttatccag tatgcttcct ttcttcttta
     1561 atcaatttgg acaaatatat ttaattactg taagtatatc tggtgttata atgatgggtc
     1621 tttctttatg gttattacta aaaccaacag aaaaggcctc atggactgtt tttaaatttt
     1681 ctagtcctta tcttacagct gtctttattg catttatggt cgatgcattt tttcattaaa
     1741 tataattcta attaattaat ttacattttg ctaatcagca attactaata ttaatagaag
     1801 taaattatta aataatattc atatattatt ataatcaatg tctgccgatc atgaaacaga
     1861 ctcaacaata gaaaatataa aatcatggga ggtagaatgg tcatcatcgg ttgaagaatt
     1921 tgatgactat tcaaaagctc ttgatctttt taatctgaaa tcaaatcaag gtgaagaaac
     1981 aatattatat gaaattcaaa agtctaaatt agatggttct atagtaaaaa aaattccaat
     2041 tctaaatact aaacaatcca aaaaaagaaa agaggaatta gaaaaacaaa gtcaaaaaca
     2101 gattccccaa caaaaaaaac aacaagcagc aacacaaagt aaaaataaaa ttggagatat
     2161 caaatataga ataataattc tggtaattat agtaattgca tttttaatat tgctatatgt
     2221 tttaagtcaa ctagttacat catctactag gttagattct cattttttac ttagttcctt
     2281 aatcaataat aatatagatt tttctttgat ttctttctat tctttcaatc tttttcaaca
     2341 actattaatt gaataatata gataatatct aatgtctata tttcaactaa atcatttaaa
     2401 ataaattttt ttcattgcta tgaagaatat atttaataaa tatagtgttg aattcatatt
     2461 gaattattgt aatctaaaag aatatgaaat aaaccaaaaa tcatttaatc ttattcataa
     2521 aaagacaaaa aaatcatttg ctttttagat taaagatttc atctaaagtt attgaatacg
     2581 gtttcttgcc actgacctta aatcgaatag agttaccttt gaactctgat tgctgtatat
     2641 accccaattt cttaaaaata gatagtgcaa tttttcctct ctgtctatta ttcccacatg
     2701 caattctatc tttgtcttgt atttcctgaa gtataaaagt ccctcccttg ttttcttctg
     2761 agactgatat tactgccctc cataaacgag ctatatatga attcggatca ttgagcgatc
     2821 ccatatagat aattttagaa cttcctattg gctttgttat caattgtgca gcaaaattca
     2881 tcctgtctgt ttctttaaaa tatattctat aaacagtttg attcttaaat tttctatatt
     2941 cttcattatc aaaccagtaa atatatccgc taggctctgg cagaaaaggt tgaacaattt
     3001 ttttttcata tattgaatcc atataattaa cattatcgta gtcaggagtt ttcttagctt
     3061 tttctttttg aaccttgata tttttatcaa tattaattat catgtgagcc tctgatagac
     3121 tttcaaaatt tacaatatac ttctttttct tctttgattc aattaacatt attattccat
     3181 catcaattaa atctctcaat gccttatcca aattgatatc gtaatgcttt ccaagttctt
     3241 ttaaaatttg ctcatggtag attgcattat gca
//
LOCUS       DATIAS010000077         2086 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1922887, whole genome shotgun sequence.
ACCESSION   DATIAS010000077 DATIAS010000000
VERSION     DATIAS010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922887"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..528)
                     /locus_tag="VLA74_01475"
     CDS             complement(199..528)
                     /locus_tag="VLA74_01475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49403.1"
                     /translation="MSDTNTKKSEDTSIRILPIIITLVTALIGAPTLYSVISDIFFSP
                     NITMDFLVDNLTTNNIILEVKNIGNELATHFSLTIESPYNISGHDLFLTENSTNIKES
                     LLDKKTL"
     gene            complement(1035..1229)
                     /locus_tag="VLA74_01480"
     CDS             complement(1035..1229)
                     /locus_tag="VLA74_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49404.1"
                     /translation="MSYIGKQKYTVSESSVMPTLKKDNFVAKHSKLGDKWIIIIPKDH
                     HDIVKNMKNPLKVTVEEIFE"
     gene            1326..1646
                     /locus_tag="VLA74_01485"
     CDS             1326..1646
                     /locus_tag="VLA74_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49405.1"
                     /translation="MPVTSKTQNKNTIDYNDDDETNEERSSSNFVPLKNENKNKKPAL
                     EYNNRTEQSYREQGLTPPENLNQQEKNFLSKVNTEVEPITRTVTKIVRLKAIDYNSSK
                     RERK"
     gene            1650..1967
                     /locus_tag="VLA74_01490"
     CDS             1650..1967
                     /locus_tag="VLA74_01490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49406.1"
                     /translation="MIYYENWTGHDWLKRTVPPVTDHIEGRYDEVITEPVYQQQELVG
                     YKFSGKRQIHYIPFSKEKVDEIIEKSIGSNKEIIKYLFSEEPLGYEFPYEEFVNKSYE
                     ELV"
BASE COUNT          808 a          278 c          297 g          703 t
ORIGIN      
        1 caactctaca tttagaaatg aatctgatat tggaaaagca gtatctgatt ggacatgtga
       61 ctacaataac tctcatcatg gcaatataac tagagttagt ttacataatg aactcatgtg
      121 tttgtttaca taactgttaa caaataaatc caatctaatt aatgaacctg gtccttgcac
      181 taatctcgga atagatattt acagtgtttt tttgtctaat aacgattctt ttatgttagt
      241 agaattttct gttaaaaata gatcatgtcc tgaaatatta tatggtgatt caattgtcaa
      301 tgaaaaatga gttgctagtt cattgcctat gtttttaact tctaaaatga tattattcgt
      361 tgttaaatta tcgactaaaa aatccatagt tatgttggga ctaaaaaata tatcagaaat
      421 aacactataa agtgtaggtg ctccaataag agccgtcact aaagttataa ttattggaag
      481 gatacggata ctagtatctt cggatttctt agtattagta tctgacaatt aaaattacat
      541 tagaattaaa atattttaat ttttattctc ttaaagaaaa aattttttat caatgtgttc
      601 ttatcaataa gcaaactatg acctacaatc ttaggaaatt atattaaatc gttatatttt
      661 tctatcccac ttttttagat attcgcttaa tgcttcaatg ataatttctg ttaatgtttt
      721 atctggatca gagactaaag attttaactc taataattcg ataagatatt tttaaagttg
      781 ttttagttgt agatttataa ttaattaatg gtgttttcgt taattcaatt aaacaataat
      841 gacatttctg acacacggaa gttaggttat taattgaatc taaacccttt ttacttcttg
      901 gaataacatg atgaatatct aatctgtcta actcttttaa tggttttaaa caaatctgat
      961 ctgacaagta tgatcatcag gttctaatac ttgggttcgt gttatttgcc aacaactagt
     1021 catttctttt attattattc aaaaatctcc tctactgtaa ccttaagtgg attcttcata
     1081 ttttttacaa tatcatgatg gtcctttgga ataatgatta tccatttatc tcctaactta
     1141 ctatgttttg caacaaaatt atctttcttt agtgtgggca tgactgatga ttctgaaacc
     1201 gtatactttt gtttacctat ataactcatt gtatactaat tgagtatata tatgtttact
     1261 aatgtttact tcgatatacg tttatataca tgaaattgct ataataaaat actgataaga
     1321 taaaaatgcc agtaacaagt aaaactcaaa ataaaaatac tatagattat aatgatgatg
     1381 atgaaacaaa cgaagaaaga agttctagca atttcgtacc cctaaagaat gaaaataaaa
     1441 ataagaaacc agcattagaa tataacaata gaactgaaca aagttataga gaacaaggac
     1501 taacaccacc agagaattta aatcaacaag aaaagaattt tctatcaaaa gtaaatactg
     1561 aagtagaacc tattacaagg acagttacaa aaatcgtaag acttaaggct attgattata
     1621 attcatcaaa aagggaaaga aaataatatt tgatatatta cgaaaactgg acaggacatg
     1681 attggttaaa aagaactgtt ccaccagtta ctgatcatat tgaaggtaga tatgacgaag
     1741 tgataacgga accagtttat caacaacaag aacttgttgg atacaaattc agtggtaaaa
     1801 gacaaataca ttatattcca ttctcaaagg aaaaggtaga cgaaataatt gaaaaaagta
     1861 ttggaagcaa taaagagatt ataaaatatt tgttctctga agaaccttta ggatatgaat
     1921 ttccttatga agaatttgtt aataaatcat atgaagaact tgtataaatg ttaatagcac
     1981 caggtggacc aaagacaatt ttgcagaaac aacgattaga aaagtttcat aaagaacaag
     2041 agcaacagca agaacaaaaa caaaaagaac aagtaataaa acaaca
//
LOCUS       DATIAS010000078         2046 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_424364, whole genome shotgun sequence.
ACCESSION   DATIAS010000078 DATIAS010000000
VERSION     DATIAS010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424364"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(710..892)
                     /locus_tag="VLA74_01495"
     CDS             complement(710..892)
                     /locus_tag="VLA74_01495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49407.1"
                     /translation="MYANCQEYIYNILPQVPLELIHIAISLVKDRGIGFKYILPVDAL
                     IPKQSEEFLEKKDIKI"
     gene            1089..1676
                     /locus_tag="VLA74_01500"
     CDS             1089..1676
                     /locus_tag="VLA74_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49408.1"
                     /translation="MVSGKYFNRGVKALDSPDIGRVVRETPDKIVVFGERNSRYDIPI
                     SEINQVGANVLINLNLAEIEEKYSVNREDPLPTSRKDPWGSSDNQVDLGSYEGKYPNT
                     LFNKGVRTADEDYVGHVMKETTDKIVVFGIGNDRFDIPKSEIIAVGRNVIVKKNFPEL
                     DVYKVDRNSPLPTGEPIEKLNEEAYPEYYHGPRDT"
BASE COUNT          724 a          281 c          328 g          713 t
ORIGIN      
        1 ttgcagcgat aataataaaa ctcttcagct cgttaataat tattttattt attgcaatag
       61 ttggatattt aatatataaa tggtacatgc gtaatagact taggtaattt atcttagatt
      121 tgtaatccca aacagacttt atgaatctct ttaaaacaac tttaaagttg ttttcctata
      181 ttctaatatc aagaaaacta ttggttgttg gatatattaa gttactatat tagcaaacat
      241 tgagtcttct ctgtaaaaat gtaaaaagcg agttttcaag caccatcaaa tcgttgaatt
      301 cgagagtaaa tggatttttg ttaatgtgta taaaattata taatttttct tcaaaatcat
      361 aagagaatca attgagaaaa aatatatagt aagatattac aatgaaaagt agtcaagttt
      421 tttaaatttc atcttcttgt tagaggctgt tatataaaac atataatttt ctggatctgt
      481 ttcatctatc atacgaaata ttcatacaaa tattgattgt ttacagcggt ctagtaaaag
      541 ataattacat ttttaaaaaa tagtacaatt ttaggcaatt gatgctcata aagaattcat
      601 atcggcctga ccttttagct tgggaaaaat tatcatagcc tgattttcag taacgaccag
      661 tcctatatat gtactgttga ccattcttct ttccactttc ccttttgtat tagatcttta
      721 tatccttctt ttcaagaaat tcttcacttt gctttggtat taatgcatcg actgggagaa
      781 tatacttgaa ccctattccc cgatctttta ctagtgatat ggctatatgt attaactcta
      841 atggaacctg aggcagtatg ttgtaaatat attcttgaca gttagcatac atccttttta
      901 catgctctat taatgctaca aatccactat taagactaca tgcctctgat tctgctattc
      961 tgtgaataaa ttttattaga atatcatgga agtcatgttc tgagaaatat ttttgatgtt
     1021 ttgagagaaa attaattcat tcatgataat ttttaaattc atgttttgtg gtataaagaa
     1081 ctgatcacat ggtatcggga aaatatttca acagaggagt taaagcgtta gattcaccag
     1141 atattggacg tgtagtaaga gaaacgcctg ataaaatagt agtttttggc gagagaaatt
     1201 caagatacga tattccaatc tctgagatta atcaagttgg tgcaaatgtg cttatcaatc
     1261 tcaatctggc agagatcgaa gaaaaataca gtgtaaatcg tgaagaccca cttccaacta
     1321 gtcgtaaaga cccttggggg tcatctgata atcaagtaga tttaggctca tatgaaggaa
     1381 aatatccaaa tactttattt aataaaggtg taagaactgc agatgaagat tatgtaggac
     1441 atgttatgaa agaaactaca gacaaaatcg tagttttcgg aatagggaac gatagatttg
     1501 acattcccaa atcggaaata atagcggtgg gaagaaatgt tattgttaaa aagaattttc
     1561 cagaattaga tgtctacaag gtggatagaa attcgccatt gccaacagga gaacccatag
     1621 aaaaattgaa tgaagaagca tatccagaat attatcatgg acccagagac acttaatgga
     1681 tctgatgtat ttagtgaaat tataatctaa attgtttatt gtttctttga tttccgtggt
     1741 aaacaacctt atttttttgg tttgaaaatt gttttattca ttgtaatttt tagaaatttt
     1801 taaaccgcct ctacttatcg aaggaaaaat acttcacata gaatcttatg aattgtattc
     1861 ccaagttaat tgaatagttt ttcatttcta gccatgatat ttgctataat cacataaaat
     1921 atccaagcaa ataacgttgt aattattgag attataaaag gataagataa tgaattcaaa
     1981 aattaagtat gttgaaagaa atttaacaaa gagataagat atctctgcga acccaattac
     2041 agtaat
//
LOCUS       DATIAS010000079         2336 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1378780, whole genome shotgun sequence.
ACCESSION   DATIAS010000079 DATIAS010000000
VERSION     DATIAS010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1378780"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(388..2073)
                     /locus_tag="VLA74_01505"
     CDS             complement(388..2073)
                     /locus_tag="VLA74_01505"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49409.1"
                     /translation="MNRKQIPQLINKNKNDIIFSQQNYYFTLFDFAQLKSFSLYTYSE
                     LQKIYRILKENIRTSFTQAYYSLGCAFLEKEEYEDANEALQIAMSISQVQNTKIIYSQ
                     AISQLQIKLYRESLSSLQLYTQLIPESRRSLENNIKKIKAFSNGQKYALLVGINNYIN
                     LEMPNIKGAINDVLALKKVLLEKLKFKEENITILLDEQATNVAILESFKQLIKDSETG
                     PAIFYFAGAGSEKDETLSIVSVDSRLEGVYDIRLKELSYLSSNSNLVTIIDAGWNIGG
                     SRTAPKDERKRPTSRGIGFTPRNIYKEDELNLKIGELTIYSPSMKSLKSFFLLHNELE
                     VPSFENYDNKVYHGELTYAIIKTFIENDINNMTYSKLIDLISTVKPKIIFDKEDALVF
                     SNSKLVNKVTKSLKTIEKLQVINKAIFLLQRLIERRNDIYPEGYLNLGIAYAAKGDYD
                     NGIKSIERAIVQKDNFYLEASYYLGKFLFERGKEFAKAVAILREVIKHEPNNNPAHYY
                     LGQSIRSLIEKETLLEAERSLRTYLENGAEIGHEVSVWEFINSIEEKKQSIKV"
BASE COUNT          765 a          360 c          303 g          908 t
ORIGIN      
        1 aatggtcata caccatatga aatgtttctt atgaaaggaa caagattaaa taattccagt
       61 aataaaaaga aaattaagca gataaaaagt gttacccatg ttggtaagtg aatctgttac
      121 ctatgtatgt aagtacaaca aataatttct ttcggattaa taaccatagt gccgcaaaat
      181 aagattttat gttatagtaa taaagatcca tatatattta atcattattt ttgaaatctt
      241 ctattaaatt attttacata tattacaatt agccatctat atgataaaat aataaataat
      301 ccagaatcag aaattcttta tcattattta ctacttctat gataaaataa tgtgagatac
      361 tatatccata acattataaa gtgaatgtta tactttaatt gattgctttt tctcctcaat
      421 tgaatttata aactcccata cacttacttc atgacctatt tctgcaccat tttctaagta
      481 tgttcttaat gacctctcag cttctaatag tgtctccttt tcaatcaagg acctgatgga
      541 ttgtccaaga taatagtgag caggattatt gttaggttca tgttttataa cctctcgtaa
      601 aatagctact gctttagcaa attcctttcc tctttcaaat aaaaacttac ccaaataata
      661 acttgcttca agataaaaat tatctttttg tacaatagct ctttctatag atttaatgcc
      721 attatcataa tcgccctttg ccgcataagc tattccaagg ttaagataac cttctggata
      781 aatatcgttt cgtcgttcaa ttaatctttg aaggagaaaa atagctttat ttattacttg
      841 aagcttttca attgttttta gactttttgt gactttattt actaatttag agttactaaa
      901 aactagagca tcttctttat caaagattat ctttggcttt actgtagaaa ttaaatcaat
      961 aagttttgaa tatgtcatat tatttatatc attttctata aaggtcttta taatggcata
     1021 agtcaattca ccatgatata ccttattgtc ataattttca aaagaaggta cttctaactc
     1081 attatgtaat agaaaaaatg attttaatga tttcatactc ggagagtaaa ttgttaattc
     1141 tccaattttt agatttaatt catcttcttt ataaatattc cttggagtaa aaccaatacc
     1201 tcgtgatgta ggcctctttc gctcgtcttt aggagcagta cgactaccac caatattcca
     1261 acctgcatca ataattgtaa caagattgct gttgctagaa agataagata attctttaag
     1321 gcgaatgtcg tatactcctt ctagtctgct atcaacactt acaatagata atgtttcgtc
     1381 cttctcagaa cctgctcctg caaaataaaa aattgctggt cctgtttctg aatcttttat
     1441 caactgttta aaagattcta gaattgcaac attagttgct tgctcatcaa gcaatatagt
     1501 aatattttct tctttgaact tcaatttttc aagtaatact ttttttaatg caagtacatc
     1561 atttatggct ccttttatat taggcatttc cagatttata taattattaa tgccaacaag
     1621 taaggcatat ttttgaccat ttgagaatgc tttaattttt ttaatattat tttctagact
     1681 tcttctactt tctggaatta attgagtata tagttgtagg cttgaaagtg attctctata
     1741 aagttttatt tgtagctgtg atatagcttg tgagtatatt atttttgtat tctgtacttg
     1801 gcttatagac atagcaattt gtaatgcttc atttgcatct tcatattctt ccttctccaa
     1861 gaaagcacac cctaacgaat agtatgcttg tgtaaaggaa gttctaatat tttcctttaa
     1921 tatacgatag attttttgca gttcagaata ggtatacaat gaaaaagatt ttaattgtgc
     1981 aaaatcaaag agagtaaaat aataattttg ttgagaaaat ataatatcat tcttattttt
     2041 gtttattaat tgaggaattt gttttcgatt caatgcatct ctaccttttt caacaatata
     2101 ctcaattatt ctactatagg taggattttc gatatcaaaa ttgtataatg cttctgagaa
     2161 aaagtatgtg aaaacaccat gtatcttagg tccaaactta agagttatgt agtcatactc
     2221 attactccta tctgtaaaat atcagttatc cttctaccat gtttctcatt gtagttgtat
     2281 gtccagtcag atactgcttt tccaatatct ggttcatttc taaaggtaga attgtt
//
LOCUS       DATIAS010000080         2948 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1241725, whole genome shotgun sequence.
ACCESSION   DATIAS010000080 DATIAS010000000
VERSION     DATIAS010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1241725"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2017)
                     /locus_tag="VLA74_01510"
     CDS             complement(<1..2017)
                     /locus_tag="VLA74_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49410.1"
                     /translation="MSDLDLKIDNQLDDNSINDIHREKEEDQQHYDKGIIRKCGNIKN
                     NNEDEIDLDPSEELEKKNIIQKFIIHKKNGCIKLELNHKYEKSTIVVPTIKVKDWTKF
                     QNSVEKELNRKGVCDKEDIRLIQNALDDNYDRILGMIYDDDNYINKQGKRKEEKTKRE
                     LTAFKYSQIGKGELYESVLRNDGKPFFIQYIHGSKEFKLVEKIEENSRILRPPESEEY
                     PYSPYEFTGLEEINRYKDFIINNRIDMDHIYQNSKSIISRFNNQDDYKLTLIAADVTL
                     SYFQDRFSTIYYDYIVGGNGSGKSSLGDTFGAIAYRAVVMTDPTAPNLFRLIGSIEPA
                     QCTIVLEEADRIDKSPELMAILKTGSSRNGRVPKINPNTFKQEFYFSYCQKVIISERS
                     LNHSIAKGVNTRILPINCFKGQTKYDIKEILNPTDTGGSQNKELMKELEDFRKLLLVY
                     RLMHFKDPIPDLDIGIEGRDKELVKHLIQILYGSKCLAEIIESLQKFLDIKNQKKETS
                     LDHALLPIISDLIKDNGPRMLFKTFWNALRAGIPGKEDEKKPNEYHTEDHGTIYRTTI
                     TGLLSDTFGVKKEHKRDGNILIFDPLVIEKLSKNDKTKIIVKELLNKEKSSSSSSYDD
                     NNEDIQCEGVNGVNTPDRGDSIEIKEDIEETDQTEIQNQSSTSLVNNN"
     gene            complement(2010..2474)
                     /locus_tag="VLA74_01515"
     CDS             complement(2010..2474)
                     /locus_tag="VLA74_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49411.1"
                     /translation="MRIKNMLGRYQKMNIKKIDDKTLYDQNRNILIIPYYFPEFFYED
                     PNALKKLEDDLFNFLVNIVHILSDHNRHQILLGDTLEPRPSFSMYVRYIPPEIDEKLD
                     HLPEPVLYEFAVYLIGRLTEYITQSENLHSYQYFVDEFRDEWLLKSGVFLDV"
     gene            complement(2682..2858)
                     /locus_tag="VLA74_01520"
     CDS             complement(2682..2858)
                     /locus_tag="VLA74_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49412.1"
                     /translation="MIKNIKREKSKHIVVSDENFDELKKYGYANDSMNDVITRILKSI
                     RLELGSRVGELTKL"
BASE COUNT          856 a          493 c          392 g         1207 t
ORIGIN      
        1 cattattatt tactaatgat gttgatgatt ggttctgtat ttcggtttga tccgtttctt
       61 ctatatcctc ttttatttca attgaatccc ctctgtcagg agtgttcaca ccattcacgc
      121 cttcacattg aatgtcttca ttattatcat cataactact actgctgcta cttttttcct
      181 tgttcaataa ctctttgacg ataatctttg ttttgtcatt cttcgatagt ttttcaatca
      241 ctagaggatc aaatatcaaa atattgccat cacgtttatg ttcttttttt actccaaatg
      301 tatcagataa taaaccagtt atcgtagttc tgtatatggt tccatgatct tctgtatgat
      361 attcattagg ttttttctca tcttcttttc cagggatccc tgctcttaat gcattccaga
      421 acgttttaaa taacattcta ggaccattat ctttaattaa atcagatata ataggcaata
      481 atgcatggtc tagagaagtc tctttctttt gattctttat gtcaagaaat ttttgcaaag
      541 attcaattat ttcagctaaa cattttgaac catacaatat ctggattaaa tgttttacca
      601 gttccttatc tctgccttcg attccaatgt caaggtctgg aattggatct ttgaaatgca
      661 ttagtcgata aactaatagt agttttctga aatcttctaa ttctttcatt agttctttat
      721 tttgtgatcc tccagtatca gttggattca aaatttcttt gatatcatac ttagtttgtc
      781 ctttaaaaca attaataggt aaaatcctag tattgactcc tttagcaatt gagtggttca
      841 acgacctttc tgaaataatt accttttgac agtaactaaa atagaattct tgtttaaaag
      901 tatttggatt tatttttggg actctcccat ttcgagaaga acctgttttg agaatagcca
      961 tcaattcggg ggatttgtct attctatcag cttcttccaa aacaatagta cattgtgctg
     1021 gctctattga tcctattaac ctaaacagat tcggagcagt tggatctgtc ataactacag
     1081 cacgataggc aattgctcca aatgtatctc ctaatgagct ctttccactt ccattaccgc
     1141 cgacaatata atcatagtag attgtgctaa atctatcctg gaaataggac aaggtaacat
     1201 cagcagctat aagggttaat ttgtagtcat cctgattatt aaatcttgaa ataatggact
     1261 tactgttttg atatatgtga tccatatcta tacggttatt aattataaaa tctttatagc
     1321 gattgatttc ttccaatcct gtaaactcat aaggagagta tggatattct tcgctttctg
     1381 gaggtcttaa tattctgcta ttttcttcaa tcttttcaac tagtttaaat tcttttgatc
     1441 catgaatgta ttgtataaag aatggtttac catcatttct tagaacagat tcatataatt
     1501 ctccttttcc aatttgagaa tatttgaaag cagtaagttc tcgtttggtt ttctcttctt
     1561 ttctttttcc ttgtttatta atataattat catcatcata aatcattcca agaatacggt
     1621 cataattatc atctagggcg ttttgtatta gtctgatatc ttctttatca caaactcctt
     1681 tgcgatttaa ctccttttcc accgagtttt gaaattttgt ccaatccttt actttgattg
     1741 ttggaacaac aattgtgctt ttttcatatt tatgatttag ttctagcttg atacagccat
     1801 tttttttatg tatgatgaat ttctgtatta tatttttctt ttcaagttcc tcacttggat
     1861 ctaagtcaat ttcatcttca ttattatttt ttatgttacc acattttcga attatacctt
     1921 tatcataatg ttgttgatct tcttcctttt ctctatggat atcatttata gaattatcat
     1981 ctaattgatt atctattttt agatctagat cagacatcta aaaaaactcc acttttcaat
     2041 aaccattcat cacgaaactc atcaacaaaa tattgatagc tatgaagatt ttcgctttgt
     2101 gttatatatt cagttaatct accaataaga taaactgcga attcatataa aactggctct
     2161 ggcaagtgat ctaatttttc atctatttca ggggggatgt atcttacata catggaaaaa
     2221 gatggtcttg gttccagtgt atctcctaat aatatttggt gtctgttgtg atcagataaa
     2281 atatgaacga tgttaactaa aaaattgaat aaatcatctt ctagtttttt taaggcgtta
     2341 ggatcctcat agaaaaattc aggaaagtaa tatggaataa tgagtatatt cctattctga
     2401 tcatacaatg ttttatcatc tattttttta atattcatct tttgatatct accgagcata
     2461 tttttaattc tcatcaaagg tagtgtattc tgtagtaatt cctgctctga gaaaagtgtc
     2521 gaattctctt tgattcctag cttctgtatt atgcactttt tgaatataat ccaataatta
     2581 taaattaatc gtaggagatg tttccacctt ttatatcgag aattatttaa atatgagatt
     2641 ctatatttat tcatagttaa tcgcctttat tatttattag gttagagttt agtgagttct
     2701 ccaactcttg agcctaactc taacctaata ctttttagta ttctagtaat gacatcattc
     2761 attgaatcat ttgcataccc atattttttt agttcatcaa aattttcatc acttacaaca
     2821 atatgtttcg acttttctct tttaatattt ttaatcattt tgaaaatatt atagtatata
     2881 ttatatatat atgatttggt cacgattgtc ttgacaatat cgactgtcaa aacagtcata
     2941 acttttta
//
LOCUS       DATIAS010000081         2472 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1378852, whole genome shotgun sequence.
ACCESSION   DATIAS010000081 DATIAS010000000
VERSION     DATIAS010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1378852"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VLA74_01525"
     CDS             <1..459
                     /locus_tag="VLA74_01525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49413.1"
                     /translation="KSIEREGISLHFPSDWKELAIENENQLIRISSSDGYSFITINRY
                     DSGSISEVLTKRVNEFVKYLPGIEFYNIEVNSNPLEFKNIQSQYIIQAGSIEEDNNLK
                     LLHYEKGYMMDDHPLMITLYYAGLDESYYNNSAIADSIIESLKIDPQAFG"
     gene            complement(912..1319)
                     /locus_tag="VLA74_01530"
     CDS             complement(912..1319)
                     /locus_tag="VLA74_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49414.1"
                     /translation="MQNMIGMLAQSFGIDPNIASMAVNGATKMFLKKSTPKAASGLLT
                     ALPRDITDQFDDNDKQKFKTTQDNVNRYDLLKQLSEITGIKDIDKLDNFADVILDNIK
                     QNARIDLTDGLDKEELFQGLTDLSRQQQQSRQF"
     gene            complement(1749..>2472)
                     /locus_tag="VLA74_01535"
     CDS             complement(1749..>2472)
                     /locus_tag="VLA74_01535"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSF49415.1"
                     /translation="ASEFPQIRALPNASLINPSFHGIPKDADMEKRQVAQNILSIDED
                     FGRIFYIMPNGDMYFEEPYSAQENLTRDNFAFRDYYKGAVSTGDTYLGNVIISASSGL
                     PQVNMAIPLYSGNGSSKVNNTENLIGLFAGDQDISIFNKSLQSLPLSENETVIYVDNN
                     GQIIASSSSPSSYIINNQDQSDDGDVSSLQSFKDIMDGKSGYNIENINDKDMLIVYAP
                     VKFKSTTWGVLFISPLSNNIVR"
BASE COUNT          889 a          325 c          375 g          883 t
ORIGIN      
        1 aaatcaatag aaagggaggg aatttctctt cattttccat ctgattggaa agagttagct
       61 attgaaaatg aaaatcagct aattagaatt tcatcttcag atggatattc gtttattact
      121 atcaataggt atgattcagg atctataagt gaagttttaa caaaaagagt gaacgaattt
      181 gtaaaatatt taccaggaat tgaattttat aatatagaag ttaactcaaa tccattggaa
      241 tttaagaata ttcaatctca atacatcata caagctggct ctattgaaga ggataataat
      301 ttgaaacttt tgcattatga aaaaggatat atgatggatg atcatccttt aatgattacc
      361 ctttattatg cgggcttgga tgaatcttat tataataaca gtgccatcgc ggatagtatt
      421 atcgaatcgc taaagattga tcctcaagca tttggataat tattattaat gaaatagtca
      481 tataggttta gttgataatg gatgtagtcc atccaataga aatttgacga gacctgaaga
      541 agttgcaaag aagatttacg atatgatatc taatcaaaaa ggttactata attggaaatc
      601 agtagaatat tataataata attaatgaat atttaatatt atgttactaa aatattcttg
      661 agtttaatat ttaaagcggt gctaaaataa gagtctaaga tatgctaata aagaaaatat
      721 aatatttaag atttacttta tatcgcaata atgataataa aatagaattt tattacttta
      781 attgcttttt tatagtattt gtaaattcct ttttatcaac aggtttcctc attatttgtt
      841 cttttgatat actagaaaat atcattagaa aaaactttat aatgattaaa tgagacaaaa
      901 aaattaaaaa attaaaattg acgagattgt tgttgttgtc ttgatagatc tgttaatcct
      961 tgaaacaatt cttctttgtc aagaccatca gttaaatcaa ttctagcatt ttgctttata
     1021 ttatccaaaa taacatcagc aaaattatct aatttgtcga tatcttttat acctgttatt
     1081 tctgacaatt gttttagcaa atcataacga tttacattat cttgtgttgt tttaaatttt
     1141 tgtttatcat tgtcatcaaa ttggtcagta atatctctag gtaaagcagt taaaagacct
     1201 gaagcagcct taggagtaga ttttttaaga aacattttgg ttgcaccatt aactgccata
     1261 ctagctatgt ttggatctat tccaaacgat tgtgccagca ttccaatcat gttttgcata
     1321 atttacaata gtcattgtta tagataaatt tttccaaaag ttttaaaatt attgaattta
     1381 ttataaagat ttacaaaaat aaattatata aaaacagcac aattgattat gtaaaaaatg
     1441 agataaaata atagaataac tggagagtgt ggcacataaa gtatttatga taaaagtaat
     1501 gcaggtctgg aagatatgaa tttaaatctg taacagatat cactgtcaca cgctaaaaat
     1561 attctgaatt ctgaactccg agaatgtatt atcttttatt ctgtgctttg ttacaaaacg
     1621 acattttcgt tatttttgat taaaaaaata aatctactat tatatataga gaagattttc
     1681 atatccttag agcctgtaaa taaaagatat ctaactatat tgtcttgatt tacaatgtag
     1741 atggcctctt atctaacaat attatttgat aaaggagaga taaagagtac tccccatgtt
     1801 gttgatttga atttgactgg tgcgtataca attaacatat ctttatcatt aatattttca
     1861 atattgtatc cagatttgcc atccataata tctttgaaag attgaagaga agagacatca
     1921 ccatcatctg attgatcttg attattaata atatatgatg aaggcgatga tgagctggca
     1981 ataatttggc cattgttatc tacgtatatt acagtttcat tttctgatag tggaagagat
     2041 tgtaatgatt tgttaaatat agaaatgtcc tgatcaccag caaataatcc tatcaaattc
     2101 tcagtattgt tgaccttact actaccatta ccagagtata atggtatagc catattgact
     2161 tggggaaggc cagaagaggc agatatgatt acatttccaa gataggtatc cccagtagaa
     2221 acggctcctt tgtaataatc tctaaatgca aagttatctc tagtgagatt ctcttgtgcc
     2281 gaataaggct cttcaaagta catatcacca tttggcatta tatagaaaat tcgtccaaaa
     2341 tcctcatcaa tagataaaat attttgtgct acttgtcttt tttccatatc tgcatctttt
     2401 ggaataccat ggaaagaagg attgattaaa cttgcattag gcagagccct aatttgagga
     2461 aactcacttg ct
//
LOCUS       DATIAS010000082         2040 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1241928, whole genome shotgun sequence.
ACCESSION   DATIAS010000082 DATIAS010000000
VERSION     DATIAS010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1241928"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(486..677)
                     /locus_tag="VLA74_01540"
     CDS             complement(486..677)
                     /locus_tag="VLA74_01540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49416.1"
                     /translation="MINNKKIIYLVLFAFICTIPLAFLLLPQVNLAASQLDPSQDPIE
                     PIPPSNNTNSNQTVPIIYN"
     gene            complement(866..1516)
                     /locus_tag="VLA74_01545"
     CDS             complement(866..1516)
                     /locus_tag="VLA74_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49417.1"
                     /translation="MARIEERQYENIVKHHNNNSNFYNPLSSSSDFLSQLDQSLSYSI
                     EKDVDYGYGKIDTIWHISLHPSLPSSKFGFIRIGAEGRADQDKKDNQYSFRKIEEAIG
                     RGIRSGCDKVFLVVDNEEMAKSISGRIEWLSSFGSIIRFDAVSIGVSPNQQNKPSTIT
                     PSQQRVPEGEKIRKEEMREREKKFDKYNRPKGERVKQDGKDEKLEREIKLDENNSL"
     gene            complement(1566..>2040)
                     /locus_tag="VLA74_01550"
     CDS             complement(1566..>2040)
                     /locus_tag="VLA74_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49418.1"
                     /translation="LIIMNQNNQNLDSSSYSNSRSQERQQMIETLKAPIIQMGKNLLG
                     VEVTENYDQGAGPIDVLWTFKPGSEALPDIRLGFVCLTSEYSESLVNETIIKSMMNLV
                     DKLVIVVPSENMTEKISDSIKSMPNSSFLQLRKYVTVLTPSTLVSKTDILTSREK"
BASE COUNT          690 a          297 c          253 g          800 t
ORIGIN      
        1 aattattata tttcatacta gatgagaagg taaaataata aaaagcaaag gaggaaaact
       61 aaaactatta ttacaactat attaatctaa taagaaaatc tatctcactc caacagatgt
      121 aataaaaaag aaagaagttt agatgccaat aatttttatc acagctatat cattcgaaat
      181 acattatata gttagcaaat ataaaaaatg aaaaacatat acctttaaag aaacgaaaaa
      241 ataaagtaaa atagtaatta aataagagga tttaatttgt attaaacata ataaatattt
      301 taataatata tcggtttatt tgtctattgt aatagttgtc atagttctta ttatctctat
      361 gatggcaaat caaatgaaga aggtgaggac atttttactc atctagcaaa taattctata
      421 aaatctaaaa tatattatta aaaaagttaa atatcatatt catataaatc acctagataa
      481 ttaagttaat tgtaaataat aggaacagtc tgattcgaat tggtattatt agatggtggt
      541 atgggttcta ttggatcttg agatggatct agttgactag ctgcaagatt aacttgtgga
      601 agtaataaaa aagcaagagg gatagtacag atgaatgcaa atagaactaa ataaataatc
      661 tttttattgt taatcattaa acaaatttct acaatatatt ataaaaagat atatggaaaa
      721 ttttatttat tattaactag tattaaacaa taataaaaat aagaatttac gatttattga
      781 tattgttatt tctgttgtct ttattatatc aaataaaata atctaatatt cacactgcat
      841 tgttaaacat catattcctt ttgtcctata ggctattatt ctcatctaat ttaatttctc
      901 tttctaattt ttcatcttta ccatcttgtt ttactctttc tccttttggt ctattgtatt
      961 tgtcaaattt cttttccctc tccctcatct cttcttttct tatcttttct ccttctggaa
     1021 ctctttgttg acttggtgta atagtactag gtttattttg ctgatttgga ctaacaccta
     1081 tagaaactgc atcaaatctg attatacttc caaaagatga tagccattct attcttccac
     1141 ttatagattt agccatttcc tcattatcta ctactagaaa tactttatca catccacttc
     1201 taattcctct tcctattgct tcttctatct ttctaaatga atattgattg tcttttttat
     1261 cttgatctgc tcttccttct gctccaattc taataaatcc aaattttgat gaaggtaatg
     1321 atggatgtaa tgatatatgc catattgtat ctatctttcc atagccatag tcaacatctt
     1381 tctctatgga ataggataaa gattggtcta gttgagaaag gaaatcggat gatgatgata
     1441 atggattgta aaagttacta ttattattgt gatgcttcac aatgttttca tattgtcttt
     1501 cttcaattct tgccattttt attcaactcc taaattgctt ctcctctacc tattgtctgt
     1561 aaattttatt tttctcttga ggttaaaata tctgtctttg ataccaatgt tgaaggtgtt
     1621 aatacagtaa catattttct taattgtaag aaactgctat taggcataga tttaatcgaa
     1681 tcacttattt tttctgtcat attttctgat ggtactacta ttactaattt atcaacaaga
     1741 ttcatcatac tttttattat agtctcattt actagagatt cagaatattc agatgtaaga
     1801 caaacaaatc caagtcttat atctggtaat gcttcagagc caggcttgaa tgtccataaa
     1861 acatctattg gacctgcacc ttgatcatag ttctctgtta cttcgactcc caacaagttt
     1921 tttcccattt gaataattgg agcctttaat gtttctatca tctgttgcct ttcttgtgat
     1981 cttgaattag aatatgaaga tgaatcaagg ttttgattat tttgattcat tataattaaa
//
LOCUS       DATIAS010000083         2766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_288777, whole genome shotgun sequence.
ACCESSION   DATIAS010000083 DATIAS010000000
VERSION     DATIAS010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288777"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(353..1003)
                     /locus_tag="VLA74_01555"
     CDS             complement(353..1003)
                     /locus_tag="VLA74_01555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49419.1"
                     /translation="MFNSDGYEIFFKNMRKEITQYTLLVAILAVLIYIAVVSTGTVAT
                     TNQNKNSITELQDANLAEYQLVSGNLDYVHTADMNRATQTVLLNGITLNSGEFILLYD
                     STPYASKGHIALNLPCDPKDPQDRLFNVLIGRAPDMVTMALGYIPQLSSPPDMCIYHG
                     QFGFGDPVTDIALKSVADDPITLRGPHSVAIVTHESYIPEQPSFMQIQHNMTSSSQ"
     gene            complement(1378..1611)
                     /locus_tag="VLA74_01560"
     CDS             complement(1378..1611)
                     /locus_tag="VLA74_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49420.1"
                     /translation="MTVMDGLDLYNKLHNLSKKVLKDTKPSNDLRVCFMTASRINYPV
                     LAEMYPEFGEECYVCKEIPKADFIKHVYSLIFC"
     gene            complement(1818..2021)
                     /locus_tag="VLA74_01565"
     CDS             complement(1818..2021)
                     /locus_tag="VLA74_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49421.1"
                     /translation="MNTTTTNQKNNDDEFYKNMFTNNMIIGKKTITINEDTHRELAKV
                     GAYGESMDDIIKRLLDFYEKHRK"
     gene            complement(2102..2548)
                     /locus_tag="VLA74_01570"
     CDS             complement(2102..2548)
                     /locus_tag="VLA74_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49422.1"
                     /translation="MSRRNRDYYFDMAINAVVEYVKKKDGIEWTGQDKPRYLNILKND
                     KKFHVFACFRYGLIIDYDSNTDELEINEVKDSTGRRYTKDELVFLKSSVDRFGSLKEF
                     KAYREFKFQHTNIKNIEELNKEFRKEFGIPAIMPIPADLNNLIDSA"
BASE COUNT          923 a          434 c          356 g         1053 t
ORIGIN      
        1 cgtctctata ctttactaat ttgctaactg gatagagtga tagcaaacct gtaatcaata
       61 ataacaaaaa atctaatata ctcgtcattt ttatttatcg aggggtacaa ttagagaact
      121 ttatacttaa atattatttc aaaaaatttt agaaaactat cattttttgt tattattcat
      181 aataaaattt ctgtttaact atttctcgtt tactttctgg aactttataa tatacgatta
      241 gagacataga attgtcttgc attacatttg attgactatc atgaacctta ccaatacaat
      301 ctctaaatag aattgaaaag gggaattgaa aatagattaa aaaatgaaat aattattggg
      361 aggaactagt catgttatgt tgtatttgca taaacgatgg ttgttctggt atatatgatt
      421 catgtgtgac tattgctact gaatgtggac ctcttaatgt tattggatca tctgctactg
      481 attttagagc aatatcagtt acaggatctc caaatccaaa ctgaccatga taaatacaca
      541 tgtcgggagg agatgacaat tgtggaatat atcctagagc cattgtaacc atatcaggag
      601 ctcttcctat aagaacattg aagagacggt cttggggatc tttaggatca catggtaaat
      661 ttaatgctat atgtccttta cttgcataag gtgttgaatc atataataga ataaattcac
      721 cagaattgag agttattcca tttaaaagta ctgtctgagt ggctctattc atgtctgctg
      781 tatgaacata atctaaatta cctgatacta gttgatattc ggctaaatta gcatcttgta
      841 attcagttat agaattttta ttttggttag ttgttgctac tgttccagta ctgactacag
      901 caatatagat aagaacagct aaaattgcaa cgagaagagt atattgtgta atctcttttc
      961 tcatattctt aaaaaatatt tcgtaaccat cactattaaa caatttggtg aatagaaaga
     1021 taaactaaaa gaagataaat cattcattat attattttca aaacctgaaa ttgattctat
     1081 tcaaagtcaa ctgctgctaa aagaaagaaa aaactagaag aaattcttct caaaacaaag
     1141 caagaaaaga tacagcagtt ttgtaaagat agaagataaa aaaatatatt atttttattc
     1201 atatatgtac atacatagtt catagatagg ctgacaacag gatttacaag gagaatcaat
     1261 tattggtaaa tctgtaattg gttcgttttc atctgattct ccatctatat attgttgtac
     1321 cttatttgaa tagtctcaaa ttgaaaaata ctactttctt cttctgttac atgtttgtca
     1381 acaaaatatt agagaataga catgtttgat aaaatctgct tttggaattt ctttacagac
     1441 ataacattct tctccaaatt caggatacat ctctgctaat actggatagt ttattcttga
     1501 tgcagtcata aaacatactc ttaaatcatt tgacggtttt gtatctttta atactttttt
     1561 tgacaaatta tgtaacttgt tgtatagatc caagccatcc atcacagtca ttctataacc
     1621 aataagaaca agatcataat tttcaggatt aaagatttgt tctgctaaat caggatcatt
     1681 taatagagtc aggttgaaac ctccatcttc ttacaaccat cttttatatt ttaaagaagt
     1741 ttcaacatca tcatcatcat caactattag aatatttttc ttgctatttt tgttattggt
     1801 attagtagta taggagctca tttcctatgt ttttcataga agtctaacaa tcttttaatt
     1861 atatcgtcca tagattcacc ataggctcct accttggcta attctctatg agtatcttca
     1921 tttatggtta tagtcttttt tcctattatc atattatttg taaacatatt cttataaaat
     1981 tcatcatcat tatttttttg atttgtagtt gttgtattca ttattctgtc accatcacct
     2041 tcaatattat taaactacta actggcgttt aactttactg gtagaagagc tcatgtaagt
     2101 atcatgcact atctattaaa ttattcaagt ccgcaggaat aggcattatt gcaggaattc
     2161 caaattcttt tctaaattct ttattcaatt cttcgatatt ttttatattt gtatgctgga
     2221 atttgaattc tctgtatgcc ttaaattctt ttagactgcc aaacctatca acactagatt
     2281 taagaaaaac aagttcatcc ttagtatatc tacgaccagt agaatctttc acctcattaa
     2341 tttctaattc atcagtatta gagtcataat caattataag accatatcta aaacaagcaa
     2401 aaacatgaaa ttttttatca ttttttagaa tattcaaata tcttggcttg tcttggccag
     2461 tccactctat tccatccttc ttttttacat attctactac agcatttatt gccatatcaa
     2521 aataataatc tctatttctt ctactcattt tttcttattc ctatttttgt ctagatattt
     2581 attttggtaa taaaataaat agtacaatta aagaagctca tttcttattc tgtttttata
     2641 tgcttcaata cattttctta taatatcatc aatagtctca ccataaacac ctaatttagt
     2701 taattcagaa tgagtttcct cgctaatact tacaatcttt cttgccaata ttgttcttat
     2761 actcat
//
LOCUS       DATIAS010000084         2244 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1106296, whole genome shotgun sequence.
ACCESSION   DATIAS010000084 DATIAS010000000
VERSION     DATIAS010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106296"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(489..1067)
                     /locus_tag="VLA74_01575"
     CDS             complement(489..1067)
                     /locus_tag="VLA74_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49423.1"
                     /translation="MRFQNSKDKSVTRNSIMLILTILIISLIFSTNASLSQTYYRQSN
                     NNIIDSSKNNSVQIGEPIFVEKYSILYKTPIVMNGENATQFVFSGNGTVNEINVNLFG
                     EGVSIPQSEMIQSIIGRAFISTETEDGGHASYFFQAVGHSEEELQKSKGAVFFSSNAT
                     GSLSLLSNMVGIYKTELNKNDDLGTFVMWEWK"
     gene            complement(1295..1855)
                     /locus_tag="VLA74_01580"
     CDS             complement(1295..1855)
                     /locus_tag="VLA74_01580"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSF49424.1"
                     /translation="MELPWNDPCSNKFATTIGLITSNGHYGNNIMACEWTHHISYDPG
                     LIAISLGPTKATVKNIKKSKEFGVNLCALDQSVIASVAGGFSGINYNKIEALKELGFE
                     FYQAKKIKSLMLDRASLNVECKLLREIKFGDHIMFIGEVVYAVQNPEKQSLIYHDGKY
                     WSLQPLVKPSHEERERIRNVVKKYRK"
BASE COUNT          736 a          348 c          296 g          864 t
ORIGIN      
        1 agttcaaatg caacaggaag tctttctctt cttagtaata tggtaggtat ttacaagaca
       61 gagttaaaca aaaatgatga tctaggtacg tttattatgt gggaatggaa gtgatctaca
      121 gattttaaac aattagggaa gtctgaattt atgtgttgta gtttataaaa gtcttattaa
      181 agtaagataa attcgggttt ctaaatatga aattatattt gcgatatccc gttcaatgca
      241 atgaacgatt gacaaatccc acttcatatt cttttttttg ttgattcagg caataataat
      301 tatcaaatgt tcaaatctat ctttagaata tattattact atttcaatca aacttttttt
      361 aatgcgtaat acataaacat gaagataaga cagtaaattt tgaatattac gtggatctgt
      421 ttttaataaa acttttaaaa aatacaacac atgaatacag acttgcctaa ttgtttaaaa
      481 tctgtagatc acttccattc ccacataaca aacgtaccta gatcatcatt tttgtttaac
      541 tctgtcttgt aaatacctac catattacta agaagagaaa gacttcctgt tgcatttgaa
      601 ctaaagaata cagctccttt acttttttgt aactcttctt cagaatgtcc tactgcttga
      661 aaaaagtatg atgcatgtcc accatcttct gtttctgttg aaataaaagc tcttccaata
      721 atcgattgta tcatttctga ttgaggaatc gaaactccct ctccaaaaag attaacattt
      781 atttcattga cagttccatt acctgaaaaa acgaattgcg ttgcattctc tccattcata
      841 acaatcggtg ttttatataa aatcgaatat ttttccacaa atattggctc gcctatttga
      901 acggaattat tttttgatga gtctatgata ttgttattag actgtctata gtaggtctgt
      961 gatagagatg cattcgttga aaatatcaag gatataatca aaattgttaa tattaacata
     1021 atactatttc gagtaactga tttatcttta gaattttgaa atctcattaa tttattttgt
     1081 tttagaatct atttatgttt gtatggatga tgttaatttt ttttattgaa ataatttaat
     1141 ttttatttta ttttatttta ttttgataaa cgatatattt ttcaatttat aaaatatata
     1201 atgaatctca aatttgtttt tagatactaa tcatttgctt ttaagcacaa tacggcatct
     1261 tggattcatc ttaatgtaat gaatagcata ataatcattt tctatacttt tttacaacat
     1321 ttcttattct ttcgcgttcc tcatggctag gttttaccaa gggttgtaat gaccaatatt
     1381 ttccatcatg ataaatcaac gattgttttt ctggattctg taccgcatat actacttcac
     1441 caataaacat tatatgatct ccaaatttta tttctcttaa aagcttacat tcaacattca
     1501 atgaagctct atctaacatt aaagatttga ttttttttgc ttggtagaat tcaaatccta
     1561 attcttttaa agcttcaatc ttattgtaat taattccact aaatccacct gccacactag
     1621 ctatcacgga ttgatctagt gcacataggt tcacaccaaa ctctttagat ttcttaatat
     1681 ttttaactgt ggctttcgtg ggacctaaag agattgctat taaacccgga tcatacgaaa
     1741 tgtgatgtgt ccattcacat gccattatat tattaccata atgaccattt gatgttatca
     1801 agccaatagt cgttgcaaat ttgtttgaac atggatcgtt ccatggcaat tccatataat
     1861 gcaatctcaa aataaaagat tttaatcttt cttggtttta ccttataaga tattaattct
     1921 ggtcctattg attacaaaca tttcatactg atgaggtctg ataaccggat agttgtcgag
     1981 ataatttgta tcataaattt agtaatttaa tatattacaa aaacactctc tatttgctca
     2041 tcatcttgaa gtcatatgtt tttgttagat tcatttgaat gaagttcata aacgcaatcc
     2101 ttaaaatatt tataaaatac catatattgt caagaccatt tttgtcgtca gacagtcacc
     2161 tttaagatag ctagttattt tgggattgga tataaactct attcaatgac ccacggtggt
     2221 aatctaaaat ctttatcaca agat
//
LOCUS       DATIAS010000085         2861 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_970708, whole genome shotgun sequence.
ACCESSION   DATIAS010000085 DATIAS010000000
VERSION     DATIAS010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970708"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1635
                     /gene="gltX"
                     /locus_tag="VLA74_01585"
     CDS             <1..1635
                     /gene="gltX"
                     /locus_tag="VLA74_01585"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HSF49425.1"
                     /translation="SKIIAMDQDYKKEIKKIIPKIKEEIDKINKLPKTSQIELLKEMD
                     PTYGHKKIDTKDKKEFNLPRLNNAIEGFVVTRFPPEPNGYPHIGHAKAAIIDEEYARH
                     YKGKFILRFDDTNPLNEKIEYYDAILEGIKWLKINPDIIKNTSDDINLLHKYGKEIII
                     SDRAYICTCRVDTIHKLRANGIQCECRNDLSITLENMDKIFGGYFHTNDAIIRFKGDM
                     SGKNTAMRDPTLFRIIEKEHPKLGNKIFLWPTYDFAAPIEDSLDGVTHAFRTKEYELR
                     NELYRTILKILKLRIPEVIEFSRLEFEGLPVSKRKIKPLIENSVIKDWDDPRLPTLIA
                     FKKRGFTPEAIRQFVLSLGLTLSETKPSMEILESFNRKIIENESKRLFFVNDPFKIIL
                     KNCPPLEAKIKNHPSLNMGIRNVSVKDVLYISSVDARKLNIGSELRLIELYNIVIKEI
                     NFEEREALAEYSGKILRNDIPKIQWVSNEGFVEYTIIKPNVLFIKETFNPDSLKILHG
                     FAESFVSTLSKDTRIQFIREGFCRIEDSNTSIFTHK"
     gene            1644..2528
                     /locus_tag="VLA74_01590"
     CDS             1644..2528
                     /locus_tag="VLA74_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSF49426.1"
                     /translation="MKIGRIKNNKFGETYGVVSQDFNKVITKTEIQEQTGVPIPQNIK
                     DFIFGNWIDELKKYESKLVFSLNIEDVELLVPLPNPSKIICLAFNYYDHAKDAGLTPS
                     QEPVIFIKPRTALNNPFNDILCPRNVQRLDYEAEIAVVIGKKLKNISEIDAISSIFGY
                     MIFHDVSARDIQFKDKQFTRGKSIDTFAPCGPWITTVDEVEDPQSLRIMTRVNDEIRQ
                     NSSSSKMVIPIKKIISSLSQLMTIEPGDIISTGTPAGVAMSMNNPKYLKDGDIVEINI
                     EKLGKIRNRVVFIEKVNL"
     gene            complement(2529..2831)
                     /locus_tag="VLA74_01595"
     CDS             complement(2529..2831)
                     /locus_tag="VLA74_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49427.1"
                     /translation="MVNWSNIRNARNFDDNKDLVNTINEQKIEQKKLIDQFNSKMNVF
                     ATERSIESCLDALNITIQLSNVRGELIKCYEYYSKELESKIVQLNRIVEKYQRTDL"
BASE COUNT         1127 a          396 c          476 g          862 t
ORIGIN      
        1 tcaaaaataa tagctatgga tcaggattac aaaaaagaaa taaaaaaaat aattccaaaa
       61 ataaaagaag agattgacaa aataaacaag ttaccgaaaa caagtcaaat agaattacta
      121 aaagaaatgg atccgactta tggacataaa aaaatagata ctaaggataa aaaggagttt
      181 aatctcccta gattgaataa tgccatagaa ggtttcgttg taactagatt cccaccagaa
      241 ccaaatggat atccccatat tggacatgca aaagcagcaa taattgacga agaatatgca
      301 agacattata agggtaaatt tattttgaga tttgatgata ctaatccgtt aaatgagaag
      361 atagaatatt atgatgcgat attagagggt ataaaatggt tgaagatcaa tccagatata
      421 attaagaata cgtctgacga tattaattta ttacataaat atggaaaaga aataataata
      481 tcggacagag cctacatctg tacctgtcgc gtggacacaa ttcataaatt gcgagcaaat
      541 ggaatccaat gcgaatgcag aaatgatttg tctattactt tagaaaatat ggataaaatt
      601 tttggtgggt attttcatac aaacgatgct attattagat tcaaaggaga tatgtctgga
      661 aaaaatacag caatgagaga tccaacatta ttcagaataa ttgaaaaaga acatccaaaa
      721 ctaggaaata agatattcct ttggcctact tacgattttg cagcacccat tgaagatagt
      781 ttggacggtg tgactcatgc atttagaact aaagaatatg aattaagaaa tgagttgtat
      841 cgcacgatct taaagatcct taaattgagg atacctgaag taatagaatt ttccagattg
      901 gagtttgaag ggttacccgt ttcaaagaga aaaataaaac cactaataga aaattccgtt
      961 atcaaagatt gggatgatcc taggttacca actttaattg catttaaaaa aagaggattt
     1021 acacctgagg caattagaca atttgtacta tcacttggat tgaccctgtc agagacaaag
     1081 ccttcgatgg agatccttga gtcatttaat aggaaaataa tagaaaatga atcaaaaagg
     1141 cttttttttg taaatgaccc ttttaaaatt attttaaaaa actgccctcc cctagaggct
     1201 aaaataaaga atcatccatc tttgaatatg ggtataagaa atgtttcagt taaagatgtt
     1261 ttatacatat cttcggtaga tgccagaaag ttaaatattg gaagtgaact ccgcctaata
     1321 gagctatata atatagtcat taaagaaata aactttgaag aaagagaggc tttggctgaa
     1381 tacagcggaa aaatattgag aaatgatatt ccaaaaattc aatgggtatc taatgaaggt
     1441 tttgttgaat atacaattat taaacccaat gtactattca tcaaagaaac atttaatcct
     1501 gacagtctta aaattttgca tggattcgca gaatcttttg tgtctacttt atcaaaagat
     1561 acaaggatcc agtttataag agaaggattt tgtagaatag aagacagcaa tacctcaata
     1621 ttcacacata aataggtgga aaaatgaaaa tcggtagaat aaaaaacaat aaatttggag
     1681 aaacttatgg agtagtgtca caagacttta ataaagtaat tacaaaaacc gagattcaag
     1741 aacaaacagg ggtaccgata cctcaaaaca taaaggattt tatatttgga aattggattg
     1801 atgaattaaa aaaatacgaa agtaaattag ttttttcatt aaatatagaa gatgtggaat
     1861 tacttgtacc actcccaaac cccagtaaaa ttatttgtct tgcatttaat tattatgatc
     1921 atgctaaaga tgcaggacta actccctctc aagaaccagt gatatttata aagccaagaa
     1981 ccgccttaaa caacccattt aacgatattc tttgtcctag aaatgtacaa agacttgatt
     2041 atgaagccga aatagcagta gtaatcggta aaaaactaaa aaatatttca gaaatagatg
     2101 caataagttc gatattcgga tatatgatat ttcatgatgt atctgcaaga gatattcaat
     2161 tcaaagataa gcaatttact agggggaaga gcatagatac ttttgctccc tgtggtccgt
     2221 ggattacaac cgtagatgaa gttgaagatc ctcagagttt gagaattatg acaagggtaa
     2281 atgatgagat acgccaaaat tcctctagta gtaagatggt tataccaata aagaagatca
     2341 tttctagttt aagtcaatta atgaccatag aaccaggtga catcatctca acaggaactc
     2401 ctgcaggagt tgcaatgtct atgaataatc caaaatatct aaaagatgga gatattgtag
     2461 aaataaatat tgaaaaatta ggaaagataa gaaatagagt tgtttttata gaaaaagtca
     2521 atttgtaatc atagatcagt tcgttgatac ttttcaacta ttctattcaa ttgaacaatt
     2581 ttggattcca actctttaga ataatattca taacatttta ttaattctcc tcttacatta
     2641 gacaactgaa tagtaatgtt taatgcatct aaacaagatt cgatagaccg ttctgtagca
     2701 aagacattca ttttactatt aaattgatcg ataagttttt tttgttcgat tttttgctcg
     2761 tttattgtat tcactaaatc tttattatca tcaaaatttc ttgcatttct aatatttgac
     2821 caatttacca ttatgtttaa ttttattcaa gaatatcaat a
//
LOCUS       DATIAS010000086         2238 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_834466, whole genome shotgun sequence.
ACCESSION   DATIAS010000086 DATIAS010000000
VERSION     DATIAS010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834466"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VLA74_01600"
     CDS             <1..256
                     /locus_tag="VLA74_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49428.1"
                     /translation="SDIDKSLDILTRIQVTILKAENQIFKAAVADPQVMQQFDTMKPN
                     TNEEEDYTDMEEDYTDMMQQFNNVEPNTNAEEDYTDIEDT"
     gene            complement(401..997)
                     /locus_tag="VLA74_01605"
     CDS             complement(401..997)
                     /locus_tag="VLA74_01605"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSF49429.1"
                     /translation="MGNMLIEGNRIYDNEKYGIDPHTGTHDMIIKNNIVYDNYNAGII
                     CSADCYNIIIEENKVYNNGHGDNMRGIAVSKNVSNTIIKNNIVYDEDKCISIGRDSYD
                     NSIYDNTLSNCLYGVYITKNSSNNEIHDNNIENVGYGLVAADESINNVFHSNTVTDTK
                     IQTTLEDESSIGNAFKNNKKMVSFDTLEKNNNRGKKYK"
     gene            complement(1114..2031)
                     /locus_tag="VLA74_01610"
     CDS             complement(1114..2031)
                     /locus_tag="VLA74_01610"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HSF49430.1"
                     /translation="MLNYDKLSRKPLLFKSFTGLELSEFDSICKEIELRYPQYEIKRL
                     SKRKRTRKIGAGNHFKLTVQDRFLMLLVYYRLYITYTLSGFLFDLDQSNVYRDIRDIE
                     PLVKRCIPLPQKLYNITRRLRTVQEVQTYFPDFKAFIDVTEQEIQRPKDKNRKRQYYS
                     GKKKRHTIKTQLMVNKEGEILYKSRHHKKGRQHDYIVYKDEQPQTPSQVENILDLGYL
                     GCEKDFPTVKYSLPIKKKRNMDLTVEDKEYNKNHSRLRVIIEHTICRIKKFCIMGTKY
                     RNRLKRYDHISDIVSGLVNYRIMKNSVLP"
BASE COUNT          694 a          358 c          279 g          907 t
ORIGIN      
        1 ttcagacatt gataaatcat tagatattct tactagaatt caagttacta tattaaaagc
       61 agagaaccaa atattcaaag ctgcggtggc agatcctcaa gtaatgcaac aatttgatac
      121 tatgaaacca aatactaatg aggaagaaga ttatacagat atggaagaag attatacaga
      181 tatgatgcaa caatttaata atgtggaacc aaacactaat gcagaagaag attatacaga
      241 tatagaagat acataaattt ttcaaccaaa aatgaatatc ctataatttt ctataaatta
      301 atccctttta taataagata aaaaataata tttcttaata gtttttattt aatttaaata
      361 cgttgttaag gtaatatctt tttttcaatt gtaaactttt ctatttatat tttttacctc
      421 tattattatt cttttctaat gtatcaaaac ttaccatttt cttattattt ttaaatgcat
      481 ttcctattga gctttcatct tctaatgttg tttgtatctt tgtatcagtt acagtattag
      541 aatgaaatac attattgata gactcatcag cagctactaa tccatagcca acgttttcta
      601 tattattatc atggatttca ttattagaag agttctttgt aatatatact ccataaagac
      661 aatttgaaag cgtattgtca taaatgctgt tatcatagga atctcttcca attgaaatac
      721 atttatcttc atcatatact atattatttt ttataatcgt attagacaca tttttactaa
      781 ctgcaattcc tctcatatta tcgccatgac cattattgta tactttattt tcttcaatta
      841 ttatattata acaatcagca gaacatatta ttccagcatt ataattatca taaacaatgt
      901 tatttttgat tatcatatca tgagttccag tatgagggtc gataccatat ttctcattat
      961 catatatgcg gtttccttca attaacatgt ttcccattac cttttgaata gaaacctttg
     1021 taaatatggt gcatatcatt attttttaat atactagatc tcttgcgtag ttacattagc
     1081 tctacacctt attcttaatc ctgatatatc cagttacggt aatacactat tcttcattat
     1141 tctgtaattc acaagaccag atacaatatc tgaaatatga tcatatcttt tcagtctgtt
     1201 cctatatttt gtgcccataa tacaaaattt ctttatcctg cagatagtat gttctattat
     1261 gactcgcagt ctggaatgat ttttgttata ctctttgtct tctacagtca aatccatatt
     1321 tcttttcttc tttattggta gactatactt tacagtaggg aaatcttttt cacatcctag
     1381 atatcctaaa tcaagtatgt tctctacttg tgatggtgtt tgaggttgtt catccttgta
     1441 aactatatag tcatgctgcc ttcctttctt gtgatgtctt gatttataca gtatttctcc
     1501 ctctttgttt accatcaatt gtgtctttat agtatgtctt ttcttcttgc ctgaatagta
     1561 ctgtcttttt ctattcttat ctttgggtct ttgtatctcc tgttcggtta cgtctataaa
     1621 ggctttaaaa tcaggaaaat atgtttggac ctcttgtaca gttctcaatc ttcttgtaat
     1681 attgtacaat ttttgaggta atgggataca tcttttaact agtggttcta tgtctcttat
     1741 gtctctgtac acgttactct ggtccagatc aaatagaaat cctgaaagtg tgtatgttat
     1801 gtacagtctg tagtatacca aaagcatgag aaatctgtct tgtactgtca gtttgaaatg
     1861 atttccagca cctatttttc ttgtcctttt tcttttagat agacgtttta tctcgtactg
     1921 tggatatctt aattctattt ccttgcaaat tgaatcaaat tcagataatt ctaatccagt
     1981 aaatgatttg aatagcaatg gtttcctgga taatttatca taatttagca aatctacgaa
     2041 ataactgcta aaaaagagga atatagctgt aatcttgtct attgcacaag agatctagag
     2101 atctaaaagt caatctccat atttaattaa ttttcttcca tatttaatta attttctttt
     2161 tctacgattt tgaagatgat atcacatttt aaagtatttt ttctattaag ataacgcaac
     2221 agtttctcaa tttatgca
//
LOCUS       DATIAS010000087         5367 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_697939, whole genome shotgun sequence.
ACCESSION   DATIAS010000087 DATIAS010000000
VERSION     DATIAS010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5367
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_697939"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VLA74_01615"
     CDS             <1..380
                     /locus_tag="VLA74_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49431.1"
                     /translation="LLTGSTFNADSGYDGENKYKSIFMMNMFPNIRQRINARNKGKNR
                     KYKKKASEIFNISLYHYRGLIEGIFGAEETAHHQLYCRFRLKNNQKSFGLIMGIGWNL
                     NVLNRLQSAKRLEIKMTPYVISN"
     gene            complement(808..1086)
                     /locus_tag="VLA74_01620"
     CDS             complement(808..1086)
                     /locus_tag="VLA74_01620"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HSF49432.1"
                     /translation="MGLTWDNANQDRDKFDGAILRSDHWSFQNHGFPAVVVSEDFFAN
                     DPTKGDPIKTDANPNYHQAVDRHTEIDPIFAADVASAISHTVKKLADM"
     gene            complement(1067..3064)
                     /locus_tag="VLA74_01625"
     CDS             complement(1067..3064)
                     /locus_tag="VLA74_01625"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSF49433.1"
                     /translation="MNIKPFKNVIAVLDNEFGYLRIIKNDRNNLFVNDIDLSYSTNDL
                     LDNLEKNNCKLFLLIREKYDHDLYEQLTDFLPSFTRVIPFVDHLDILLSKLKTDFLLN
                     SEETIFISSDRSSRQIASINGFYALPHVKIASMAIGKKSFEFVQIVGNRLAIDQIPKE
                     DILPYHIKEMNDGTCELVAIISNKGRNKAIYLKLQVLSLEVDISNEDIVLVNLDDTIN
                     EYKIEKALSAYGFLFSGNHFMYLTVGNNKIANIPIHGSHGHFIQLIPDETLLSKINGI
                     SEFKSRPAESGLSTILGIINKWPSKYQKLKSSNLAVSSFIEASLDDVDPNYILDNIKR
                     YSGVIDLDSTGKIKSRHCLHPDNKRSIEALKQDLEQMGYFVNVWEFQADERPPGKIPT
                     PENPDPKSLPNTEVEGATFYNVIAELSGRGDNLLLENDLSSKIRDIFIKYPNPLRNQL
                     WISEIRDLTGEEWFKENNFESLSPLDLKRTLEKVFGLTTWSNWWIKDKEISGLGSEII
                     IVGCHLDSTANLIFSNERGTIIENDHYKPNLDDAPGADDDGSGLSATLGLARLFSKFR
                     DKLKYTIQFCFFNGEEVGMRGSMKYARYMKESHAPIKAVICIDMIGYNKDNTNRTFEI
                     HAGFYNESIRDMCLPLADMVEEEAKNLGKLGTAQIYGINLG"
     gene            3333..3620
                     /locus_tag="VLA74_01630"
     CDS             3333..3620
                     /locus_tag="VLA74_01630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49434.1"
                     /translation="MFWKYKAKQYYRSKKVLEYFADNRDSLIPVYLPTASPEFMVLEE
                     IWDIAKNDLLVLQHYSSFIEFRNKISSYFRTKRFNLNMRNYLLAKIDNYTN"
     gene            complement(3899..4084)
                     /locus_tag="VLA74_01635"
     CDS             complement(3899..4084)
                     /locus_tag="VLA74_01635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49435.1"
                     /translation="MELWLQHHQNNCPNEDFTHIRRRILKIKPSVGGNLDFRDDDPIT
                     LIVDASGLTISKKGDYI"
     gene            complement(4904..>5367)
                     /locus_tag="VLA74_01640"
     CDS             complement(4904..>5367)
                     /locus_tag="VLA74_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49436.1"
                     /translation="KKYNGIQELLVLVALSIAVLEEKIRKKQNKEYIQETTPSGFDKM
                     EDISKDDLNFIVKYANSEKNDLRKAAWETIEAYLNTKRLWKHNEVWYLIENEIMSNTP
                     RDTIHNALFTLKVMLWRSNNENISYVRDPIFFVLSICKNYICICDISYYQL"
BASE COUNT         1846 a          845 c          792 g         1884 t
ORIGIN      
        1 accttctgac aggatctaca ttcaatgctg acagtggcta cgatggtgaa aacaaataca
       61 agtcaatctt tatgatgaat atgtttccaa atattaggca gaggataaat gctaggaaca
      121 aaggtaagaa caggaagtac aagaagaagg cttcagagat attcaacata tcactatatc
      181 attacagagg attaatagaa ggaatatttg gagctgagga aacagcacat catcagctat
      241 attgcagatt cagattaaag aataaccaga aaagttttgg attgataatg ggtataggat
      301 ggaacttgaa tgttctaaac agattgcaat ctgcaaaaag actagaaata aagatgacac
      361 cgtatgttat atcgaattag gcaacaaccc cagttagctc ttccgttaac ttaacagcac
      421 ctgataaaat aagataattt aagtatgact ttaacttaat aatgaattta gcttaataaa
      481 acaatagtat caagataaga aaactaatac acattttcaa tgtttctaac atttattgat
      541 tcatagctgc aaagcttagg aaattattga agcaacaggt tattgagatg tttcaactag
      601 aagatcaata attataatct gctgttatta ttctcaaaat tcatattcta taatttcatc
      661 cttaattggg atttagcaaa taatgaagtt gaattaagat gatgatgttt ttaattaata
      721 gatacataaa gaaataaatt tttcttaagg gaatattgaa acaaatatat tttattggga
      781 tattgcaata agtgcttcgg tttttagtca catgtctgcc aattttttaa ctgtatgtga
      841 aatagcagat gcaacatctg cagcaaaaat tggatcaatt tctgtatgtc tatctacagc
      901 ttggtggtaa tttggattag catctgtttt aattggatct cctttggttg gatcatttgc
      961 aaaaaaatct tctgagacta caacagctgg aaacccatga ttttgaaaag accaatgatc
     1021 actgcgtaga attgcaccat cgaacttgtc gcgatcttga ttggcattat cccaagttaa
     1081 tcccatatat ttgcgctgtc cctagttttc ccaaattctt tgcctcttct tctaccatat
     1141 ctgcaagtgg cagacacata tctctgattg attcattata gaatcctgca tgaatttcaa
     1201 aagttctatt tgtattgtct ttgttgtatc caatcatgtc tatacatatt actgctttta
     1261 ttggcgcatg gctttccttc atatatctcg catatttcat gctacctcgc attccgactt
     1321 cttcaccatt aaaaaagcaa aactgtattg tatattttag tttatctcta aatttcgaaa
     1381 ataatctagc taatcccaac gtggcagata gaccagaacc atcatcatca gctcccggcg
     1441 cgtcatctaa gttcggttta taatgatcat tttcgataat tgttcctctt tcgttagaaa
     1501 aaatcaagtt tgcagttgaa tctaaatgac atccgacgat aataatttct gaacctaatc
     1561 ccgaaatctc tttgtctttt atccaccaat ttgaccatgt tgttaacccg aatactttct
     1621 ccaacgttct tttaagatct agtggagaaa gggattcaaa attattttct ttaaaccatt
     1681 cttcacccgt taagtctctg atttcagata tccaaagctg atttcttaaa ggattagggt
     1741 attttataaa aatgtctctt attttagaag aaagatcatt ttccaaaagc aaattgtcgc
     1801 cccttccaga caattctgca ataacattat aaaatgtagc accctctacc tcagtatttg
     1861 gtagtgattt tggatcaggg ttttcaggag ttggaatttt tccaggtggg cgttcatcgg
     1921 cctgaaattc ccagacattt acaaaatagc ccatttgttc aagatcttgt tttaaagctt
     1981 ctatggagcg tttattatcg ggatgtaaac aatgacgtga ttttattttt cctgttgaat
     2041 ctaaatcaat tactcccgaa tatcttttaa tattgtccaa aatataattc ggatcgacat
     2101 catccaagct tgcttcgata aaggaagaaa cggctaaatt ggatgattta agtttttgat
     2161 atttagaagg ccatttattt ataataccaa gaatagttga tagacctgac tcagcaggtc
     2221 ttgatttgaa ttctgatata ccattaattt tagaaagtaa tgtttcatcg ggtattaatt
     2281 gtataaaatg accgtgacta ccatgtatag ggatattagc gatcttatta ttaccaactg
     2341 tcaaatacat aaaatgatta cccgaaaaca gaaaaccata agcacttaat gccttctcaa
     2401 ttttatattc atttatcgta tcatcaagat ttacaagcac tatatcttca tttgatatat
     2461 ctacttcaag agataatacc tgcagtttaa gatatattgc tttattccta cctttatttg
     2521 agataatagc tacaagttca catgttccat cattcatttc ttttatatga tatggtaaaa
     2581 tatcctcttt tggtatttga tcaatagcca atcgatttcc aactatttga acgaattcaa
     2641 atgatttttt tcctatagcc atagaagcta ttttgacatg gggaagagca taaaaaccat
     2701 ttatagatgc tatttgtcta gaagaacggt cagatgaaat gaagatcgtc tcctcagaat
     2761 ttaatagaaa atctgtcttc agttttgata aaagtatatc taaatgatcc acaaaaggaa
     2821 taactctcgt aaaagaaggc aaaaaatcag ttaattgttc atacaaatca tgatcatatt
     2881 tttctcttat caaaagaaat aatttacaat tatttttttc aagattatcc aataagtcat
     2941 tagttgaata tgataaatca atatcattta caaaaagatt attcctatcg tttttaatta
     3001 tccttaaata accgaactcg ttgtctaaca cggcgatgac atttttaaaa ggtttaatat
     3061 tcattaattt atggcttaaa gcaaaatatt taaggctttt ttgttttact gtaatagcct
     3121 attatgtgat aacatctatt aaacttttaa ctagacagat tatgtacaaa agcgtcagac
     3181 attcttgaat taaagggaat cgttgactac taatatcata gtagcaggcc tgtacagaaa
     3241 gtacaacctc acttcaaatg ttttctaaaa ctagaaacac aatttctgga ttatctaaaa
     3301 aatattcaca ggaaatttcc ataatgtgac cagtgttttg gaagtataaa gcaaaacaat
     3361 actacagatc gaaaaaggta ctggaatatt ttgctgacaa tagagacagt ttgattccag
     3421 tatatcttcc aactgcatct ccagagttta tggtacttga agaaatatgg gatatagcaa
     3481 aaaatgattt gcttgttcta caacattatt catcttttat agaattcaga aataaaatat
     3541 catcatattt tagaacaaaa aggttcaatc tgaatatgag aaactatttg cttgctaaaa
     3601 ttgataatta taccaattaa gataagtatt cttactcatt tctaactaaa gattttctaa
     3661 attcatattt ttgataatat tgttaatttt gtaatgaaat gggcacattt atgcgtgtta
     3721 tactatctaa atttacgatt atctaaaata tatactgcta atgttaattt aatgtcagtg
     3781 tatttatatt aattggtata gaaaacataa gctagttggt atactttctt tgacttttcg
     3841 tctacagata tatgcagttt tacaaactcc tttttctttt cacgtttcca tttgtcttct
     3901 atatgtaatc acctttcttt gaaattgtca aacctgatgc atcaacaata agtgttatag
     3961 gatcatcatc tcgaaaatct agattcccac caacagatgg ttttattttt agaattcgtc
     4021 tcctgatatg tgtaaaatct tcattgggac aattattctg gtggtgttga agccaaagct
     4081 ccacaatatt ttatacacgg ttacgtatgg tgcaatgaaa ttgaaggaga gatagcacat
     4141 tcttgtgctc atggtgaagg accgcattct atcaaagttt gtatcactaa aatagacaat
     4201 aaaactgata tattcaggaa acttctgtca gaagttggcc caaaaccaaa atatcataag
     4261 tgttaacaaa acctgatatc tttgtttatt aatacaacta tgtgtataat aataagtata
     4321 tcggaaatta ttttataatc actgttcact gaaatttata attaaaagca ttcagatttg
     4381 aacaaaattt atttaaatta agataaatta aaaacatctc ttcataacaa atagatatac
     4441 atgataggat ataaaactac caattatatc agatatgggc tccaaatagg cacattagca
     4501 ttaatttgac aagtatccct ctttaacgtt tactgccaaa agaaatctgg gtcatcattg
     4561 aaccaaattc aaattgcgaa aatcgtgcgt ataaatatgg ttgagaaata ggttgcaagg
     4621 cagacggaat acaaaaggaa ataattattc cataggtttt acaaaagtat atgataatat
     4681 gaagtaattg aatgaaaatt tattttgggt atttatttta tcgaagcata tttgttatct
     4741 tcattaagtt cataaatgta atgaccatca tgaattttat gatatattat ggtaaacaat
     4801 acttttccta actctttttg taggaaaaag tttttaaatt aaaattttct atgatggaca
     4861 taggcagacg actatatcta tcaactttta aaggttttat tacttataat tgataatatg
     4921 aaatatcaca aatacagata tagtttttac aaatggacaa aacaaaaaag atgggatccc
     4981 taacatagct gatattttca ttattactgc gccataacat gacttttaag gtaaatagag
     5041 cgttgtggat agtatcgcga ggtgtatttg acattatttc attttctatg aggtaccaaa
     5101 cctcattgtg tttccagaga cgttttgtat ttaaatatgc ttctatagtc tcccaagctg
     5161 ccttccttag atcatttttt tcactatttg catactttac gataaaattt aaatcatctt
     5221 tcgatatatc ttccatctta tcaaatccag aaggagttgt ttcttgaata tactctttat
     5281 tttgtttctt tcttattttt tcttccaata cagcaattga taatgccaca agaacaagta
     5341 actcttgtat gccattatat tttttaa
//
LOCUS       DATIAS010000088         4205 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1515869, whole genome shotgun sequence.
ACCESSION   DATIAS010000088 DATIAS010000000
VERSION     DATIAS010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4205
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515869"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VLA74_01645"
     CDS             <1..338
                     /locus_tag="VLA74_01645"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49437.1"
                     /translation="NNIKIIKLFLHISKDEQKRKLEERMRNPLKQWKMTESDITEPYY
                     YEQYMKAYEEALWKCSTKWARWYIIPADIKWLRNFAVAQIIVSTLKSMKLKFPKPKVD
                     IFRFTETKD"
     gene            738..1103
                     /locus_tag="VLA74_01650"
     CDS             738..1103
                     /locus_tag="VLA74_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49438.1"
                     /translation="MNNNGENFQMSTKSTLIEDNNKESIGKYKEKAKSFTDKIVNKIS
                     YIDDIRRNEIAVDNSSNVRFITFGLFTLIGFIVVIYAILVAVVADTAIQSANVFFVVT
                     ILSISILVGTLVYRIGLSK"
     gene            1361..1885
                     /locus_tag="VLA74_01655"
     CDS             1361..1885
                     /locus_tag="VLA74_01655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49439.1"
                     /translation="MFLSFFELSFAQRDINENDVNTIKKNYHNDWKGIKDKIISLTNS
                     ENIKSFNKKVNDKVFLDFNHFGLLYTIQDVKNNRYEPSFQRNTIIPITLFPNMTSLEA
                     ARVYQNMSSLGQDRVYQNMTSLEAARVYQNMTSLEAARVYQNMSSLGQDRVYQNMTSL
                     EAARVYQNMSSLAP"
     gene            2066..2320
                     /locus_tag="VLA74_01660"
     CDS             2066..2320
                     /locus_tag="VLA74_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49440.1"
                     /translation="MAIRLFERNKTSTVIVMYSLYPYFLGLSLRNTSKALIIFKDEKR
                     SYVSVWNWIQRFAGYPIYKRKRVSAFIIDEIIVHIGDENF"
     gene            2424..2567
                     /locus_tag="VLA74_01665"
     CDS             2424..2567
                     /locus_tag="VLA74_01665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49441.1"
                     /translation="MYGKHTVYTDGGTWYNEACNALRLKHYLHSPVEKILIERKSQLV
                     FQG"
     gene            3001..>4205
                     /locus_tag="VLA74_01670"
     CDS             3001..>4205
                     /locus_tag="VLA74_01670"
                     /inference="COORDINATES: protein motif:HMM:NF023835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2 helicase-associated domain-containing
                     protein"
                     /protein_id="HSF49442.1"
                     /translation="MEYGNQLRLNKWVVDCLVIDSADAMIYLKNIDEHLDNHDISYGD
                     DLVFLSEVAKFSLDLLVRQRFIPSIQFSKHLLHDDNRRRKYWAKWVPIINDIKDSNRL
                     KLLEESMPPVCRALDSRILPRQLLLNVLQSSIDGSIRRFLQEGRQKILSDIVIEKVSD
                     DYRGIDIEWLEALLSTDMEINSPKKSIENVAIELNRWSDAVSPHESGQKFITCFRLEP
                     PALDGDNGNNNNNDRHVRNTAKWKLNYLLQAVDDPSLVIEADRVWKSFKGKKGKNEGI
                     GKYLDRRFQHPQDRLLADLAVASRLFKPIERSLKSPAPSGCLIDVNEANLFLTKSVWL
                     FRESGYVILLPSWWNAKQNSLGVNVTLKSESKSLSGTTGMNLFGLNSLLDFNWRFAVG
                     EDITITEAE"
BASE COUNT         1468 a          584 c          756 g         1397 t
ORIGIN      
        1 aaaataatat taaaattata aaactatttt tgcacataag taaggatgaa caaaagagaa
       61 aattggaaga aagaatgaga aatcctctaa aacaatggaa aatgacagaa agtgacataa
      121 ctgaacccta ttattacgaa caatatatga aagcatacga ggaagctctg tggaaatgta
      181 gtacaaaatg ggctcgatgg tatataattc ctgcagatat aaaatggttg agaaattttg
      241 cagtggcaca gattatagtc tctactctta aaagtatgaa attaaaattt ccaaagccaa
      301 aagttgatat atttagattt acagaaacta aagattagta ttaattaaaa aatgtataat
      361 attatgttta ttaaataagt ctaataataa aataataaaa taattgtaat tattaccttt
      421 attaattatt tattaaatcc attatctatg agttagggct tcgatttctt attataacac
      481 gattcggtaa cataatatat tcgtttttgg ataaagtttt agagttaatt tctgtttatt
      541 ttaagagtct atatgaccaa tggttcaatt gagaaggtgg gatttgacat cttgttttgt
      601 tgtctatact ttagagaatc atagtattag atgaattctt tttgtatatc ttacttgtaa
      661 atatttatta tgctaattat ttaatttttt actgagttta ttatatttat aataagctat
      721 aatgttaaaa tatattcatg aataacaatg gcgagaattt ccaaatgtca actaaatcta
      781 cgttaataga ggacaataac aaagaatcta ttggcaaata taaagaaaaa gctaaatcct
      841 ttacagataa aatagtaaat aaaatatcat atatagatga tatcaggaga aatgaaattg
      901 cagtagataa ctcatcgaat gtaagattta taacttttgg tttatttact ttgattggtt
      961 ttatagtagt aatttatgcc atattagtcg cggtagtagc agatacagcg attcaatctg
     1021 caaatgtatt ttttgtagtt actatattga gtatttctat attagttgga actcttgtat
     1081 atcgaatcgg tctatcaaaa taggacatta ttatttttta aatatattct aaattaatcc
     1141 atattagtat acgggctcgg aggtgtgtga actgtttttg acacaaattt gtagttctaa
     1201 ttaaattatt attatttatt tgattataat agtaaataat ttgtgtaaaa ttattaaata
     1261 ggtattccca attctttaat ctatgaagat agggagaaaa cctattcaaa ttctattttt
     1321 gtttattatt gtctcttcta taagtagcat tagtattgta ttgtttttat cattttttga
     1381 attatctttt gcacaaagag atatcaatga aaatgatgta aatactatca aaaaaaacta
     1441 tcataatgat tggaaaggca ttaaagataa aataatatct ttaacaaatt cagaaaatat
     1501 taaatcattt aataaaaagg taaatgataa agtattttta gattttaatc attttggctt
     1561 attgtatacg attcaagatg ttaagaacaa tagatatgag ccttctttcc agagaaatac
     1621 tataattcct atcacattgt ttcctaatat gaccagtcta gaagctgcta gagtatacca
     1681 aaacatgtca agtcttggac aagatagagt atatcaaaac atgaccagtc tagaagctgc
     1741 tagagtatac caaaatatga ccagtctaga agctgctaga gtataccaaa acatgtcaag
     1801 tcttggacaa gatagagtat atcaaaacat gaccagtcta gaagctgcta gagtatacca
     1861 aaacatgtca agtttagcac catgatttat tttccaagct atactttgca aaaatgttat
     1921 tgaatcctat tagtatacgg gctcggaggg cttcgagtac aacatgtaat tgggatcggt
     1981 aaacatgtat ttaattttag tgtcttcaga tggtcatatt aatttaagga aatagtttta
     2041 gctatggatg ttttatctct aatctatggc tattagatta tttgaaagaa ataaaacatc
     2101 cacagttata gtaatgtatt ctctttatcc atactttctt ggtcttagtc tacgaaatac
     2161 atctaaagca ttaatcatat ttaaagatga aaaaagaagt tatgtttctg tatggaattg
     2221 gattcaaaga tttgcaggat atcccattta caaaaggaag agagtatctg cttttataat
     2281 agatgagatt attgttcata ttggtgatga aaatttctag ttatggtttt gtattgaacc
     2341 agtacacagt tctgtgcttg gaatctacat ttcagaggag agaaatatgc ttgttgctga
     2401 gaaattcatg atctttagtt caaatgtatg gaaaacatac tgtatatact gatggtggta
     2461 cttggtataa tgaagcatgt aatgccttga gattgaaaca ctatttacat tcaccagttg
     2521 agaaaatttt gattgaaaga aagagtcaat tagtatttca aggatagaac tgaatctttt
     2581 gatgactatt atccatgcat acaaattgaa tgtaatttat tatatatcta taactgaata
     2641 caattctttg tttctctatg tataataata cacagtctga gaattatttc attaatcaat
     2701 tatatgaagg aagtaggatt atcttaaatt aacagagcca ccatgatagt cttacatgga
     2761 atatggggaa gagcagaaga ctccaagtgg tacttctatt tgtggggaga aacctctgtt
     2821 gataatgata aagcagtgat aatcaaacaa cgcttctctt tcagacatcc tttcaacgca
     2881 tccagcgaag aactgcacaa agtcgcaaaa gtgacttcat ctttcagtac gattgagctg
     2941 gttttaccaa ctttcaagaa acagaagaag cctcagcctt caactccttt gctaggtcaa
     3001 gtggagtatg ggaaccagtt acggctaaat aaatgggtag ttgattgtct tgtaatcgat
     3061 tctgcagatg ccatgattta tctaaagaat attgacgaac atctcgataa tcacgatatt
     3121 tcatatggtg atgatctggt cttcttgagt gaagtggcaa aattctcact tgatttactt
     3181 gtaagacagc gtttcatccc tagcattcaa ttttcaaaac atctattgca tgatgataat
     3241 agaagaagaa aatactgggc taaatgggtt ccgataatca atgatatcaa agattccaat
     3301 agattgaagc ttctagagga atccatgcct ccagtatgcc gtgcattgga cagcagaatt
     3361 cttccgcggc agttacttct caatgttttg cagagttcga tcgatggatc gataaggaga
     3421 ttcctacaag agggacgaca gaaaatcctg agtgatatcg tgattgaaaa ggtgtctgat
     3481 gattatcgcg gtattgatat agagtggtta gaagcgctct tgtcgactga catggagatt
     3541 aattcaccta aaaagagtat tgagaatgtt gccatagaat taaatagatg gtctgacgcc
     3601 gtttctcctc atgaatccgg ccagaagttc ataacatgtt ttagactgga gcctccagca
     3661 ttagatggag ataatggtaa taataataac aatgatcgac atgtcaggaa tacggccaaa
     3721 tggaagttaa actatctttt gcaagcagtt gatgacccaa gccttgttat tgaagcagac
     3781 agggtttgga agagtttcaa aggtaagaag ggcaaaaatg aaggcattgg aaaatacctt
     3841 gaccgaaggt ttcaacatcc acaggacagg ttgcttgcag atctggccgt tgcttccagg
     3901 ctcttcaaac ctattgaaag aagtctaaaa tcgcctgcac cctctggctg tctgattgat
     3961 gttaatgaag caaatttatt cttgaccaag tcagtatggc ttttcaggga aagcggctat
     4021 gtaatccttc tgccttcttg gtggaatgcc aagcagaaca gtctaggggt caatgtaacc
     4081 ctgaaatcag aatcaaagtc tctttcagga acaacaggta tgaacctttt cggtctgaat
     4141 tctcttctgg attttaactg gaggtttgct gttggagaag atataactat taccgaggca
     4201 gaatt
//
LOCUS       DATIAS010000089         5342 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1243623, whole genome shotgun sequence.
ACCESSION   DATIAS010000089 DATIAS010000000
VERSION     DATIAS010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5342
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243623"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..986)
                     /locus_tag="VLA74_01675"
     CDS             complement(60..986)
                     /locus_tag="VLA74_01675"
                     /inference="COORDINATES: protein motif:HMM:NF024807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HSF49443.1"
                     /translation="MSIFGHIQQQAFTENAKSLWSNGTPMPTPRTEITATNIGNDIYV
                     IGGFGKSGKVLDTVEVYNTQNDSWKAIAPLPQPLHHTAASNFNGKIYVIGGYTNNNWL
                     PSAKLFVYDPKKNLWTEESPMPTARGALTAVFIDGILYAIGGEGKSGIMDINEAYNSK
                     TKNWILKSSMPTPRHHVASAVVDGNVYVIGGRVQGISPITNVNVTEMYDPKIDKWMTL
                     ESIPSKRSGISAASINNNIYVFGGEDLTKTYNNNEKYNVKNNTWESQEPLPTARHGLS
                     AVSVNDDKIYIIGGGPEPGLSVTSVNEIFNIR"
     gene            complement(1469..2254)
                     /locus_tag="VLA74_01680"
     CDS             complement(1469..2254)
                     /locus_tag="VLA74_01680"
                     /inference="COORDINATES: protein motif:HMM:NF014038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HSF49444.1"
                     /translation="MSEVETAFIILSKDYDQIFNVIDELISNKGYRTEKNGIQIIHDT
                     YFDTKDEILKKNEIALRIRNIDKNVPKITLKILQNTTENYSERIEIENIYSKETLNQI
                     ILKINSYLNLPILKTSLKYYQIDPKLNLINLGFKVIQNRQTHRKIVNAINKSSNQTEF
                     EFVFDTTAYISNNNNNITNIELEIESKLLKNNAILNDFVRDLKLNQTLFKYWPYNKLL
                     TGKVIEILLDNNELKENKDYDDKRILTLSGLEKIELFIKSKNI"
     gene            complement(3144..3731)
                     /locus_tag="VLA74_01685"
     CDS             complement(3144..3731)
                     /locus_tag="VLA74_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49445.1"
                     /translation="MGSFDIDWNDVIKKEARGINDEDLGEVKEVKSNYVLVQRGIIDK
                     EKFYIPKDQAESYDGNVLKFRLSESYLSKYQNEPSFQEDEMHINKIEEEITVQDADFK
                     NKAQAVKNKEVTDNESHNADYNSEDIIKKEARGLGDDTDFGEVQEILGEYIITQKGNV
                     AKDRFYIPKNLVERFDGETVYFKITKDEAKQYKRD"
     gene            4102..5001
                     /locus_tag="VLA74_01690"
     CDS             4102..5001
                     /locus_tag="VLA74_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSF49446.1"
                     /translation="MSKYCIINGDISLDRNLLKRKFGWTSVKVPLIGQGTWMIEGDHD
                     TESQAVKTLRLGLDLGMSHIDTAEMYGHGRAEELVAEAIAELRDQVFLTSKVLPSNAS
                     YEGTIKACKMSLRRLKTNWLDLYLLHWPSRYPISETMRAMEKLVSEGLIRFIGVSNFD
                     LEELKEAEQTLKNEQIACNQVLYHLGDRGIEKRLLPYCKEREIAVVGYAPFGHGSFPS
                     YQSRGGKVLAEIAKLHNRTPRQVALNFLTRDPCLFTIPKTINPERVKENSGGMGWKLT
                     DKDIMTIDSTFPLPNRETPLGII"
BASE COUNT         1852 a          746 c          712 g         2032 t
ORIGIN      
        1 acctaattat caggagtatc tttcaactaa tcattcacgt tattagaaag aaatttttat
       61 catctaatat taaaaatttc atttacacta gtcacactta atccaggttc aggtcctcct
      121 cctattatat atattttatc atcattaaca gagactgctg acaatccatg acgagcagta
      181 ggtaatggtt cttgagattc ccatgtatta tttttaacat tatatttttc attattgtta
      241 tatgttttag taagatcttc accgccaaat acatagatat tattattgat agatgctgcg
      301 ctaattccac tcctttttga gggtattgat tcaagtgtca tccatttatc aattttagga
      361 tcatacattt cagtaacatt aacattggta ataggagaaa ttccttgaac tcttccacca
      421 attacgtata catttccgtc aacaactgca gatgcaacat gatgtcttgg agtaggcatt
      481 gatgatttta atatccaatt tttggttttt gaattatagg cctcgttaat atccataatt
      541 ccacttttgc cttcgccacc gatagcataa agtattccat ctataaagac agctgttaat
      601 gctcctctag cagtaggcat tggagattcc tcagtccaaa gattcttttt agggtcataa
      661 acaaataatt tagctgaagg taaccaatta ttatttgtat atcctcctat aacataaatt
      721 ttaccattaa aatttgaagc agcagtatga tgcaatggtt gtggtaaagg tgctattgct
      781 ttccaagaat cattctgagt attataaact tctacagtat ctagtacttt gcctgatttg
      841 ccaaatccac ctatgacgta aatatcattt ccaatattag tagcagtaat ttctgttcta
      901 ggtgttggca ttggagttcc attagaccac aaagatttag cattttctgt aaaagcttgt
      961 tgttgtatat gtccaaatat cgacataatc aaaaaaaaca acaatatagg aaaaactgat
     1021 aatatgaata aagtatgttt catattataa tataataatt tactttagta aataagatta
     1081 tctttataga gtaaagtaat atttctaaat gttccacaat tggtggaaag acaatgagtt
     1141 catatacaaa ttagaagagt cacagagaat aaatcagtcg tttgtcatcg agagaaaaag
     1201 acagggtaaa agaagataat gtactagctc ccttatctaa tcaatcaatt acttattaag
     1261 caaaagaata tgtaacaatt gaaaagaaaa taggtcatat aatctctaaa tttatctatg
     1321 aaaaataagt tcagagtgat ttgatctttt ttctaataat tttggttcat taataaaaaa
     1381 ttaattacaa ttgaatagag ccaattaata tatttattaa ataaatatat taaagattag
     1441 atattaaaaa gttttaatat acttattact atatgttttt tgattttata aataattcaa
     1501 tcttctctaa tcccgataaa gtcaaaatcc ttttatcatc ataatctttg ttttctttta
     1561 attcattgtt atctaataat atctctataa ctttacctgt taacaattta ttataaggcc
     1621 aatatttaaa taaagtttga ttaagtttta agtctctaac aaaatcatta agtattgcat
     1681 tattttttag taattttgat tctatttcca attctatgtt agttatatta ttattattat
     1741 tagagatgta tgcagtggta tcaaatacaa attcaaattc tgtttgatta gaacttttgt
     1801 taatagcatt gacaattttt ctatgagttt gtctattttg aattacttta aaacctaaat
     1861 ttatcaaatt tagtttagga tcaatttgat aatattttaa agaggtttta agtataggta
     1921 aattgagata agagtttatt ttcaaaataa tttggttaag agtttctttc gaatagatat
     1981 tttctatctc tattctttca gaataatttt cagtggtatt ttgtaatatt ttcaaagtaa
     2041 ttttaggaac atttttatcg atatttctaa tacgtaatgc aatttcattt ttttttaaaa
     2101 tttcgtcttt tgtatcaaag tatgtatcat gtattatttg aattccattc ttttcagttc
     2161 tgtatccttt atttgatatc aattcatcta tcacattaaa tatttgatca taatcttttg
     2221 aaagaattat aaatgcagtt tcaacttctg acaattactc gtatatttgt gttcaactat
     2281 atttaattat cccacgaata ttatttattt aaaatattga ttcaaaatgg tttacttttg
     2341 ttttatttac tatatatgga aaagaaattc atatactaaa taaattttat tatatactga
     2401 cattgataat agagaattct cattataata agattgagta acataatatt ttaaattttt
     2461 atttgaaaaa tagttgcttt aacttattgt attgaaattg taatatctta ctccaataat
     2521 ttagatgaat attcataaaa atatttttag agcaatggtt aaaccgtttc attaaattaa
     2581 tagtcaatgt tattctagta ggtatgtctt ccaaatctca ttttttgcta actacagatt
     2641 aacatcttta gagtattgat aattaaagat aataatttaa aatttttatt atgtaatttg
     2701 aatatgatat ttttaaaaaa taattaactt tatagtatta taaaaaaaag acatcatcat
     2761 catcatcata ttattattat tgatataatt tgatattatt atttgtcttc aatttcttaa
     2821 tctgaatttt gctatgtata tatatattta catatccctc tattttatat aatagttatc
     2881 aagtcagaag atagtttaca tgcaattaga ccctgaaatt tctttgtggt aatattgtct
     2941 tggttaatat gccagatatt tgtctaggag caaattagat ttatataatc gtactattag
     3001 tagcccattc ttactttgct ttccactatg aatataagcc aatattactt ctatattagt
     3061 taaattaatc tgaatattgt ttgcattgac ttactattta cctatgaaat atagtctaac
     3121 tgaaaatatt tttgcaaaag aaattaatct cttttgtatt gttttgcttc gtcttttgtt
     3181 attttaaaat agacagtctc cccatcaaat ctttccacta aattctttgg aatatagaat
     3241 ctatctttgg ccacattacc tttttgtgtt attatatatt ctcctaaaat ttcttgaact
     3301 tcaccaaaat cagtatcatc acctaatcct cttgcttctt ttttaataat atcttcagaa
     3361 ttatagtcag cattatgtga ttcgttatca gttacttctt tattttttac tgcttgtgcc
     3421 ttgtttttaa aatctgcatc ttgaactgtt atttcttctt ctattttgtt aatatgcatt
     3481 tcatcctctt gaaaagatgg ctcattttga tatttactca aatatgattc ggaaagccta
     3541 aattttaaca cattaccatc ataactttcc gcttgatctt ttggaatgta gaatttttcc
     3601 ttatcaatta tccctctttg aactagtaca taattacttt taacctcttt aacttcacct
     3661 aaatcctcat cattaattcc tcttgcttct tttttaataa catcattcca atcgatatca
     3721 aaagaaccca tagaatattc tattttacaa cttatttaat aattatagat attcactagt
     3781 ggtgagcgaa aaagatttta aatcaaaata ttaaggaatt tgagaaaatt tacttaccac
     3841 aacctaaaat tgtaataact tctagactac aattaactat aaccaacagg ttgcaattta
     3901 caactatact agatgacata atgataatgt aagccatata aataataaaa taaatatgta
     3961 ttgatggctt tttataattt gttctattaa aagtattcta ttgatttttt ccgttatcga
     4021 ctagtaggct gaaaatgaga tcacttatag atctataata ctttaatttt cactttaaat
     4081 tgttttatat cttatatagc attgtctaaa tattgtatta ttaatggaga tatatcgttg
     4141 gatagaaatt tactcaaaag aaaatttggt tggaccagtg ttaaagttcc tctgatcggc
     4201 caaggtacat ggatgattga aggtgatcat gatactgaat cacaagcagt aaaaacgcta
     4261 agattaggct tggatctagg tatgtctcat attgacacag cagaaatgta tggccatgga
     4321 cgtgcagaag aattagtagc tgaagccatt gctgagctac gagaccaagt attcttgact
     4381 agtaaagtcc taccttctaa cgcctcttat gaaggaacta taaaggcttg taaaatgagc
     4441 ttaagacggc taaagacaaa ctggcttgac ttgtacttac ttcattggcc tagtagatat
     4501 cctattagtg aaacaatgcg tgcaatggaa aagcttgtgt ctgaaggttt aatacgattt
     4561 attggtgtca gcaattttga cttggaagag ctaaaggaag ctgaacagac acttaaaaat
     4621 gagcaaattg catgtaatca agtactttat catttaggtg atcgtggaat tgagaaacgc
     4681 ttacttccat attgtaaaga gagagaaata gctgtagtag gatatgctcc atttggacat
     4741 ggaagttttc catcttacca aagtcgtgga ggaaaagtgt tagcagaaat tgctaaacta
     4801 cataatcgta ctcctagaca agttgcactt aatttcctta cacgagatcc atgtcttttc
     4861 acaattccaa agactattaa tccagaacga gttaaagaga atagcggagg tatgggctgg
     4921 aaactgactg ataaagatat tatgacaatt gacagcacgt ttcctttacc taatcgtgag
     4981 actccattgg gaataattta gacacaagtc cattattact aatgtgaata ttgctaaaat
     5041 gtatgatcct gaaagataaa tggattgtac taaaatctat gccttcaaaa cttagtaaac
     5101 ttacagctag agcttataat gataatatct atatatttag agtaaactgt atacatatct
     5161 agaataagtt actacagata ttgtaataga tacaaaaaag aagaatttga cgaattaaaa
     5221 gacaaattta aaagattaca tactatttag atcaagatta agaaaaaaag aaaactcata
     5281 ttcagatgta ttgcttataa tatgcacaaa tatgtaagga ggattattgt aatatgattt
     5341 ct
//
LOCUS       DATIAS010000090         7257 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1516114, whole genome shotgun sequence.
ACCESSION   DATIAS010000090 DATIAS010000000
VERSION     DATIAS010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7257
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516114"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            249..992
                     /locus_tag="VLA74_01695"
     CDS             249..992
                     /locus_tag="VLA74_01695"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSF49447.1"
                     /translation="MMNLVKQTEHTATVTGSTRGIGKETALLLLKNGMNVIISSKNQD
                     SVDNTIQEILDKFPTKKENILGLKCDVSKQSDVKSLVDVSIKKFGRIDILVNNAGIVY
                     YKSLIDTTEEEWNKTIDTNLKGAFLFTKEVLPHMINNKSGGVIVNVSSSAGKSGFPNL
                     SAYCASKFGVIGLTESIAKEVADNNIKVMAICPGGVDTDMTKDIVNDGYNLSSRNLMK
                     PQQVAKKIYDMISNQKSYYNGQSIEFYNQ"
     gene            complement(1305..1853)
                     /locus_tag="VLA74_01700"
     CDS             complement(1305..1853)
                     /locus_tag="VLA74_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSF49448.1"
                     /translation="MSGVGWGLTEFCDELADQEGEGAIELAVTLTLQVVQISDSEIQN
                     VIECLKKIGFIPPPPPPVDTEPPNVLSFTAEPFRVSFSSGGTITITAHVTDATGVQRV
                     GVFIQDECGGSPGFFQSFELPRVAGTLRDGTYQSTFTFPESALDVNHFCNPNLAFQIG
                     GVVTDTLGNGKGLPLIGVILEP"
     gene            complement(2009..2323)
                     /locus_tag="VLA74_01705"
     CDS             complement(2009..2323)
                     /locus_tag="VLA74_01705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49449.1"
                     /translation="MNNKIISTKKPSAIFLAVILVAGVIVMSSPFVAYGEAYQSFKCK
                     GNNVNIDSVEQIKQRQTENNNNFDAATNSQQQLTPTEAEGEEPLNALTGNSKVMVTVN
                     HY"
     gene            complement(2634..2969)
                     /locus_tag="VLA74_01710"
     CDS             complement(2634..2969)
                     /locus_tag="VLA74_01710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49450.1"
                     /translation="MIYNKLFIIMPIVAAILTSVLSLATFTMPTFAQSGAEEGANQTM
                     QDMGQSANQTGENMQQGANQTGEAIQGNASEVGSDITEGAKNVGQNITEGAKGLAETI
                     GKGLQDLAK"
     gene            complement(2972..3136)
                     /locus_tag="VLA74_01715"
     CDS             complement(2972..3136)
                     /locus_tag="VLA74_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49451.1"
                     /translation="MENDKDIKIETDEDVGLDDKIKAGAKALGKKIEDPDRDTGAEYE
                     AEKAKERVVD"
     gene            complement(3333..3584)
                     /locus_tag="VLA74_01720"
     CDS             complement(3333..3584)
                     /locus_tag="VLA74_01720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49452.1"
                     /translation="MSSDSNIDNDYNFEEIVKKEARGLGDDTDFGEVQEILGEHIITQ
                     KGTVDKERYHIPRNLIERFDGNTVYFKITKDEAKQYKRD"
     gene            3713..5410
                     /locus_tag="VLA74_01725"
     CDS             3713..5410
                     /locus_tag="VLA74_01725"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF49453.1"
                     /translation="MNNYDSGNSANYNNRKQKEKYENDEFELKTSGHTESVWYEEIPQ
                     SMKFDKLKRNISPSESIDVAIVGGGIAGLLTAYMLSKSGKKVVLFEDGYICSGETGRT
                     TAHITHTLDDKYYNLEELHGNEGARLAAESHTAAINMIELIVNEEKIDCDFEKLDGFL
                     FLDSSDKKESLDKELEATHRAGIISTKIISKVPNLSFDSGPCLLFPNQAQFHPLKYLK
                     GVTEAILRYGGKIFTETHIQDILPQINQVKTSDGYTAFAKNIVIATNAPIIDKVSKIY
                     DKQQAYRTYVIGARIKKDRIPKALYWDTGNQNSENTVAPYHYVRIQHNRENNSKYDIL
                     IVGGEDHLTGNIMDDRDVQQRYTNLESWTRNRFPIEDIEFQWSGQVLEPKDGIAFIGY
                     NPGDEEKKNIFIVTGDSGNGITHGTIAGIILTDLILGKSNPWISLYNPSRVPREKSDN
                     SQSSNKDKKKEEENNNNKKESSSMNKDTEIKKKMISLQDLDIEQGIVQEEEKIAAYKD
                     SNNKLHRYSAVCTHLGCTVVWNNLEKSFDCPCHGSRFSAITGKAINGPANNELDKKQ"
     gene            5463..5585
                     /locus_tag="VLA74_01730"
     CDS             5463..5585
                     /locus_tag="VLA74_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="C2H2-type zinc finger protein"
                     /protein_id="HSF49454.1"
                     /translation="MTSDVKPDQTKCKECGKSFDTTEGLEQHYELEHKWKNDKI"
     gene            6043..6267
                     /locus_tag="VLA74_01735"
     CDS             6043..6267
                     /locus_tag="VLA74_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49455.1"
                     /translation="MSKNEKTGLNNSTYNILSALGRDADFLYDTIDKYIRDAESANKS
                     DLVELWKTIKNDRHKHIDMLKEALEKEIHQ"
     gene            6877..7032
                     /locus_tag="VLA74_01740"
     CDS             6877..7032
                     /locus_tag="VLA74_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49456.1"
                     /translation="MEPTKKTKLKYFNIVKSEAEKQINEFLSQNDSIDVKSISMDDTG
                     VMLLFEE"
BASE COUNT         2620 a         1000 c         1084 g         2553 t
ORIGIN      
        1 gcatcgttgc tactatttct gttctacctc tatatttcat attattagtt gagtaattta
       61 cttatattag tataatatta catgaaaaga taagatagct attgtaaaat attctactat
      121 tatttgtaaa tattgtcata gaaaaataac catatgcttg gataataaat ctgattctac
      181 tactatttta aatttagctt ttattattag aaacttaaat tattaaaatt aatacaagac
      241 taaaactaat gatgaattta gtgaaacaga ctgaacatac tgccactgtt actggaagta
      301 caagggggat aggtaaagaa actgctttac tgttattaaa aaatggaatg aatgtaatta
      361 tatcttctaa aaatcaagat agtgtagata ataccataca agaaattctt gacaaatttc
      421 ctactaaaaa ggaaaatatt ttaggtttaa aatgcgatgt aagcaaacaa tctgacgtaa
      481 aatctcttgt tgatgtatcg ataaaaaaat ttggaagaat tgatattctt gttaataatg
      541 caggtatagt ttattataaa agtctaatag acacaactga agaagaatgg aataagacca
      601 ttgatactaa tttaaaaggt gcttttctat ttaccaagga agttcttcct catatgatta
      661 acaataaatc tggtggtgtt attgtcaatg ttagttctag tgcgggaaaa tctggttttc
      721 caaacttatc tgcatattgt gcaagcaaat ttggtgtaat aggtttaact gaaagtatag
      781 ctaaagaagt tgctgataat aatataaagg ttatggcaat atgtcctggt ggagtagata
      841 cagatatgac aaaagatatt gtaaatgatg gatataatct atccagtaga aatttgatga
      901 aacctcaaca agttgcaaaa aagatttatg atatgatatc taatcaaaaa agttactata
      961 atgggcagtc aatagaattt tataatcaat gagaatcttt attaaatgat tatatagtat
     1021 tatcaggtgt aacaccgata gcggtgcaaa aataggagtc taatacttta gtaaagaaag
     1081 aaaataatat ttaacattta cttttatatt ttaaaaaaga aaaattaaat tgtaaaaatt
     1141 ctactgtata ttagttgatg agatagtttt ttaccattaa aaaaaattct aaaaatgtca
     1201 gattatcatt gaatttaaat tttttacaaa ttactaatat agattcgtta acttctatag
     1261 aataaatctg ttataacaaa atcgaacaaa ataaaaatag gagtttaagg ctctaatata
     1321 actcctataa gtggtaatcc tttaccatta cctagagtat cagttactac tccacctatt
     1381 tggaatgcta gattcggatt acagaaatga ttaacgtcta atgcactttc ggggaatgtg
     1441 aatgtactct gataagttcc gtctctaagt gttcctgcta cacgaggtaa ctcaaagctt
     1501 tgaaagaatc ctggtgagcc tccacattca tcctgtatga aaacaccaac tctttgaaca
     1561 cctgttgcat cggtaacatg agcagttatt gtgatagtac ctccacttga aaagcttacc
     1621 ctgaatggtt cagctgtaaa tgaaagcaca tttggtggtt ctgtatcaac aggaggagga
     1681 ggcggtggaa taaatccaat ttttttgagg cattctatta cattctgtat ttcagaatcg
     1741 ctgatttgta caacttgtaa agtaagagta actgctaatt ctatggcacc ttctccttcc
     1801 tggtctgcta attcatcaca aaactcggta agaccccatc caacacctga caaatatcct
     1861 aataaatcct ttaatgattt actacttagc ttcttttcaa aacactcttc acatgtagtt
     1921 ggaccatcac cattaccgtc gtcatcatct tgtgttatca gtgcattatt ttcgttgtta
     1981 ccaaaattaa gacatacatt ctttaaggtt agtaatggtt caccgttacc attaccttgc
     2041 tattgccagt taatgcattc aatggttctt ctccttctgc ttctgttggt gtcaattgtt
     2101 gttgactatt cgttgctgca tcaaaattat tattattttc agtttgtcgt tgtttgattt
     2161 gttctacact atcaatattt acattgttac ctttacattt aaaactttgg taagcctctc
     2221 cataggcaac aaatggagaa gacattacaa taactcctgc gactagtata acagctaaaa
     2281 aaattgcact aggttttttt gttgatatta ttttattatt caatatttaa aaatattata
     2341 ctaattatat ctgaaatatg atagaccaat aaatattctt tgaaaataag agttagatag
     2401 ctcattgttt tgaaaaataa tttcataaga tgaatatata gagattcatt ataacattaa
     2461 ttggataagg ataaagttta aaagttgcta atattatatc caagtgaatc ttctatatag
     2521 agatggacta ctatcatctt ctatttagtt atcattatta gaaacttatt ttaatatata
     2581 gataaaataa ttgagaatac agtaattgtt tgtgtaaaaa agaaaaaaat ttactacttt
     2641 gctaaatctt gtagtccttt gccgattgtt tcagcaagac cttttgcacc ttcagtgata
     2701 ttttgtccta cgttctttgc tccttcagtt atatcagaac caacttcgct agcattacct
     2761 tgaattgctt ctcctgtctg gttggcgcct tgttgcatat tttcgccagt ttgatttgca
     2821 gattgaccca tatcttgcat agtttgattt gctccttctt ctgctcctga ttgtgcaaat
     2881 gttggcattg taaatgttgc taaagaaagt acacttgtaa gaattgctgc tactatgggc
     2941 attatgataa ataatttatt gtatatcatt ttcaatcaac tactctttct ttggcttttt
     3001 ctgcttcata ctctgcacca gtatctctat ccgggtcttc tatttttttg cctaaggctt
     3061 ttgctcctgc ttttattttg tcatctaatc ctacatcttc atctgtttcg atttttatgt
     3121 ctttatcatt ttccattgta attgttctta tatattataa tttatattaa ttggatatag
     3181 ataaatacat aataatatta tattttattt tatagtaata atcttagaat aaatgttatt
     3241 aaattttcga ttgagataca ccaattataa cttgttattt tattattaca aatttattaa
     3301 ttaagaaata aatatagaat aaaaaagata gattaatctc ttttgtattg ttttgcttca
     3361 tctttggtta tcttaaaata gacagtattg ccatcaaatc gttctatcaa atttctagga
     3421 atatgatacc tttctttatc tacagttcct ttttgtgtta ttatgtgttc tcctaatatt
     3481 tcttggactt caccaaaatc agtatcgtct cccaatcctc ttgcttcttt tttgacaatt
     3541 tcttcgaaat tataatcatt atcaatatta gaatcacttg acatattctc actagtttaa
     3601 catttaatat aaaaattgta tgttcacttt tgaattcata atcatccttt ttaatataat
     3661 aaagacttgt agagttacaa tcgtaatatc atataaagaa catcaaattc atatgaataa
     3721 ttatgatagt ggtaattctg ccaattataa taataggaaa caaaaggaaa aatatgagaa
     3781 tgatgaattt gagctaaaaa catctggaca tactgaatca gtttggtatg aggagatacc
     3841 acaatctatg aaatttgata aattgaagcg aaatatttct ccttctgaat caatagatgt
     3901 agctatcgtg ggtggtggaa ttgctggatt attaactgcc tatatgcttt caaaatcagg
     3961 aaaaaaagta gttttatttg aagatggcta tatatgtagt ggtgaaacag gtcgtactac
     4021 tgctcacatt acacatactt tagatgacaa atattataat ctagaggaat tacatgggaa
     4081 tgaaggagca cgcctagcag cagaaagtca cacggcagct ataaatatga tagagttaat
     4141 agtaaatgaa gaaaagattg actgtgattt tgaaaaacta gatggttttt tgtttctaga
     4201 ttctagtgat aagaaagaat cattagataa agaacttgaa gcaacccatc gagctggtat
     4261 aataagtact aaaataattt ctaaagtgcc taatttatca tttgatagtg ggccttgctt
     4321 attgtttcct aatcaagctc aatttcatcc attaaaatat cttaagggag ttaccgaagc
     4381 aatattacgt tatggaggaa agatatttac tgaaacccat attcaagata ttctaccaca
     4441 aataaatcaa gttaaaactt cagatggata tacagctttt gcaaaaaata tagtaatagc
     4501 tactaatgca cccatcattg acaaagtaag caaaatttat gataaacaac aagcttatag
     4561 aacatatgtt attggagcaa gaatcaaaaa agatagaatt cccaaggctc tttattggga
     4621 tactgggaat caaaattcag aaaatacagt tgcaccatat cattatgtta gaatccaaca
     4681 taatagagaa aataattcaa agtatgatat attaattgtt ggaggagaag accatttaac
     4741 aggtaatata atggatgaca gagatgtaca acaaagatat actaaccttg aatcttggac
     4801 aagaaatcga tttcctatag aagacataga gtttcaatgg tctggtcaag tcttggaacc
     4861 aaaagacggt atagcattca ttggctataa tcctggagat gaagagaaga agaatatttt
     4921 tattgttaca ggtgattcag gaaatggaat tacacatgga actattgctg gaatcatctt
     4981 aacagattta attcttggga aaagtaaccc atggatttct ctttataatc catcaagagt
     5041 tccaagagaa aaatctgata attctcaaag ctcaaataaa gataaaaaga aagaagaaga
     5101 aaataataac aataaaaaag aatcatcatc aatgaataaa gatactgaaa taaaaaagaa
     5161 gatgatatct cttcaagatt tagatattga acagggaata gtacaagaag aagaaaagat
     5221 agctgcatat aaagactcca ataacaaatt acatcgttat tctgctgtat gcacacattt
     5281 aggttgcacg gtagtttgga acaatttgga aaaatcgttt gattgccctt gtcatgggtc
     5341 tcgcttttct gctattactg gaaaagcaat aaatggacca gccaacaatg aactggataa
     5401 aaaacaataa taataataaa aaccataata attaaaatac aaaggctatt aactatttgt
     5461 tgatgacatc agatgtaaaa ccagaccaaa caaaatgcaa agaatgtgga aaatcttttg
     5521 atactactga aggattagaa caacactatg aattggaaca taaatggaaa aatgataaaa
     5581 tttaaaatta attaatatcc ttttttacaa gatacatttt atgataaact taactatctt
     5641 tttgtcactt gaccattatt ataagattaa ttattcagat actacatcta atgctgtaat
     5701 accgatagcg gtgcaaaaat aagagtccaa tgtaaaaata ctacatcata tttagctttt
     5761 attattagaa acttattttt aagttatttt gaaaattaag agatgcgaat tacttaatat
     5821 gttaaggagt gagtaatacc tatagcggtg caataatatg agtctattag agatattact
     5881 aacaactatt tagcttttat tattagaaac ttataataaa tatttcaatc cgattgtgac
     5941 gacattgaag attacattaa tccttttttt aaaatggtca tagtttggat taatcaaaat
     6001 cttgctataa gttatttata atttgaagtc catacattcg ttatgagtaa aaatgaaaaa
     6061 acaggcttaa ataattctac atacaatata ttgtctgctt taggaagaga tgctgatttt
     6121 ctatatgata caattgataa atatattcgt gatgcagaaa gtgctaataa atctgatttg
     6181 gtagaactat ggaaaacaat aaagaatgac cgtcataaac atatagatat gttaaaagag
     6241 gctttagaaa aggaaattca tcaataaatt ttatttttaa aaataatagt taaatatacg
     6301 attattaaaa cctaaaaacc tcaatggtat tctgtatata gtggggactt ccaatattac
     6361 atagtattta gcttttatta ttagaaactt attatgtttg aaaatgtaaa aaaatgaaat
     6421 tttattaaat attctgcgtt aagtttatac cagagagttc ttcttcaagt ttcctttttt
     6481 ctttttcatg tgtatttatt atatcatctg caccattctg ttccaaggat gtttttgtaa
     6541 tttcttctgt ttttcttgtt cttgtttgat tttcgacgcc tgatttttta gttcatccat
     6601 tatactaacc tctataccaa aagaagtacg attacaataa aattggttaa tttaatgctt
     6661 ttttaagcag ttaccgttag tggcgtctct tcttgattag gtagtttttc tttttcaagt
     6721 tttttattag gtactacttc tttttctgga atttcgtatg tttcacacat agtagtcttt
     6781 attggctttc atcaattata aaggttggag taaaattata tcaaaagata aatgagccat
     6841 atttgattta tttataattt aaaaccatta tatattatgg aaccaaccaa aaaaacaaaa
     6901 ttgaaatact ttaatatagt aaaatcagaa gctgaaaaac agattaatga atttttatca
     6961 caaaatgatt cgatagatgt aaaaagtata tctatggatg atacaggtgt aatgctgttg
     7021 tttgaagaat aagttgtata gaagatgaac ttaataagaa tgcaatgtaa atgttgaaca
     7081 atcaaaagaa atttgtatta gttcataaaa atgataaggt ttactaagtt aagtatctca
     7141 tatatcatca acatgcatta gtattatcaa catagtagga tagtaagaac tttagctctg
     7201 catgtttaga ttgatacata tgcccaaatc ttatattctg aaattatctg atatcca
//
LOCUS       DATIAS010000091         4476 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1380961, whole genome shotgun sequence.
ACCESSION   DATIAS010000091 DATIAS010000000
VERSION     DATIAS010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4476
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1380961"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VLA74_01745"
     CDS             complement(<1..525)
                     /locus_tag="VLA74_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HSF49457.1"
                     /translation="MKVGVIGASGYVGGELIRLLVSHPKVELNMVTSRQQAGEYVHRV
                     HPSLKGFIDLTFSPMDIKKLLDSCDLVFVSVPHGSANQIVKDLYDSDVKIIDLSADFR
                     LKNPKDYVKWYGWEHPYPELLSKSVYGVPEFHREDIKTAKLVSCPGCMAVTSLLALKP
                     LIEHDLIDTNHIVVD"
     gene            complement(632..1486)
                     /gene="lysX"
                     /locus_tag="VLA74_01750"
     CDS             complement(632..1486)
                     /gene="lysX"
                     /locus_tag="VLA74_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine biosynthesis protein LysX"
                     /protein_id="HSF49458.1"
                     /translation="MELSIIYDKLRFEEKALYDDAVKKGVNTKLLDAKSVSISTEFND
                     NQYFGDIFLQRCISHFRGLYITSCLEFLGYPVINKYEVSEICGNKLRTSLILAKSNVA
                     APKTYFCFNSDSFKLLIDKLGYPIVLKPIVGSWGRGVFPVRNEEIANMLIETREENDS
                     PFSRIYYVQEMIKRPPRDIRCIVVGDQIVTAIYRYSADNEWRTNVARGGHTVLAPLTN
                     ELEEIVLNASKAVGGGILGVDIMEDKTRGFVVHEINSNVEFRGASQVSQSNIAGYMID
                     YVLQFSKK"
     gene            complement(1499..1672)
                     /gene="lysW/argW"
                     /locus_tag="VLA74_01755"
     CDS             complement(1499..1672)
                     /gene="lysW/argW"
                     /locus_tag="VLA74_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019878 - lysine biosynthetic process via
                     aminoadipic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-aminoadipate/glutamate carrier protein
                     LysW/ArgW"
                     /protein_id="HSF49459.1"
                     /translation="MKKECSDCGGEINIPDDAVVGEIVSCPDCGGDFEISSKSNGNIE
                     LKNAESVGEDWGE"
     gene            complement(1674..2891)
                     /locus_tag="VLA74_01760"
     CDS             complement(1674..2891)
                     /locus_tag="VLA74_01760"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HSF49460.1"
                     /translation="MVKEKCVLAYSGGLDTSVCIKYLQLLHDLDVVTVTVNIGQNDDF
                     EEIANRSKQVGAIKHYNIDASSEFTQNYIIPSIKANGLYENRYPLATALARPLIAKKA
                     VDIAAKENAKYIAHGCTGKGNDQIRFDITIRCLNPDLKIIAPIRDLNLTRDKEIQFAN
                     EHKIPVNTEVKKYSIDENLWGRSIEGGDLEDLLNEPLDECFKYVKFDNPKPGYLEIDF
                     EAGIPVSVEGQRMNLTDLVNYINIEAGSYGVGIIDHMEDRVIGIKSREIYECPAACVL
                     IESHQDLEKMVLTSHELRFKHLVDQQWSWMTYSGLWQDPLVNDLDRFIDATQNRVTGT
                     VKMRMQNGSMRVVGRRSEFSLYKNELATYSSGSIFDQTLAKGFVELWGLQSVTANSIA
                     INLNKKENKGEEQ"
     gene            3018..3950
                     /locus_tag="VLA74_01765"
     CDS             3018..3950
                     /locus_tag="VLA74_01765"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HSF49461.1"
                     /translation="MYSINNLTLLYRRYTIDEIKHKVIETLKKNDAGMSSVELADSLH
                     VNRMTITKYLNILAVIGLIKRKKIGSVNIWTLEPGVMELELPLNYLQIQQNFITALLG
                     NNKNETGKILLSTIYSDRDIIRIIKEIFIPSFNTLNEIYNRGRLGETELISLNNQLFD
                     LMILLLQHHHRETANYNVYNIFIAGNEDQTYNSKIASIASEIIGYHTNYVGNIELHID
                     PFFDIDIQRYITKSWDRKKGLKNIFIFSSEETSLRFLFTTAKFLKNKLTEEIKIIIFV
                     KREILSIAKDLNPDYVTSDINSLIAWQEDLKKHF"
     gene            complement(4013..>4476)
                     /locus_tag="VLA74_01770"
     CDS             complement(4013..>4476)
                     /locus_tag="VLA74_01770"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HSF49462.1"
                     /translation="REKTKSLQRITSILSDLSKFSQEYGVYILLEPLNRYSTPYFVQA
                     KDAIDLSSKISHDHLLLLLDTYHMNIEEKNFAEVINDSKKFLKHIHLSDNNRLMPGRG
                     HIDFDLIIKSLKNINYKNKISFETILPRKNYTLDLKYGLNYIKKISKKYDL"
BASE COUNT         1444 a          763 c          666 g         1603 t
ORIGIN      
        1 atcaacaacg atatgattcg tgtcaataag atcatgttct attaagggtt taagtgctag
       61 taaagaagta actgccatac atcctggaca cgaaactaat tttgccgttt ttatatcctc
      121 gcgatgaaat tctgggacac cgtatacaga cttggaaaga agttctggat atggatgctc
      181 ccatccatac cactttacat aatctttggg gttttttaat ctaaaatcag cagaaaggtc
      241 tataatttta acatcgctat cgtagagatc ttttactatt tgatttgcac ttccatgtgg
      301 aactgataca aagaccaaat cacatgagtc taaaagtttt ttaatatcca ttggtgaaaa
      361 agtgagatca atgaatcctt tgagacttgg atgaactcta tgtacgtatt ctccggcttg
      421 ttgtcgagaa gtcaccatat ttaactcgac ttttggatga cttacaagta gtctaattaa
      481 ctcgccacca acatatcctg atgctcctat gactcctacc ttcattatgt taaactatag
      541 atcagaatat tgctgtatct tatgaatttt attatatgtg taaaaggata atccttatca
      601 ttattaaaat taggatatct tctagtaaga attatttttt tgaaaactga agaacataat
      661 caatcatgta acctgcaata ttagattgcg atacctgaga ggccccacga aattcgacat
      721 tgctattaat ttcatgaact acaaatcctc gagttttatc ttccattata tcaacaccaa
      781 gaattccccc gccaactgct ttagatgcat ttagaacaat ctcctcaagc tcattcgtta
      841 aaggagctag gacagtatga cctcctctgg ctacatttgt tctccattca ttatctgcag
      901 aataacgata tattgcagtt acgatttggt ctcctaccac gatacatcga atatctcgtg
      961 gcggtctctt tatcatttct tgaacataat atattcttga aaatggagaa tcgttttctt
     1021 cccgtgtttc tatcaacata tttgcaatct cttcatttct taccggaaaa acaccacgtc
     1081 cccaagatcc cactattggc tttaagacga ttggataacc aagcttatcg atcagaagtt
     1141 taaatgaatc tgagttaaag caaaaatatg tttttggagc agctacattg gattttgcta
     1201 aaattaggga tgttcttaat ttatttccac atatttcgct tacttcatac ttgtttatta
     1261 ccggatatcc caagaactct aaacaagaag tgatataaag tcctctaaaa tgactgatac
     1321 atctttgtag aaaaatatct ccaaaatatt ggttatcatt aaattcagta cttattgaaa
     1381 cagattttgc atcgagtaat ttagtattaa ctcctttctt tactgcatca tcgtagagag
     1441 ctttttcttc aaatcgtagt ttatcataga taatagatag ttccattttt tttcaagttt
     1501 attctcccca gtcttctcct acggattctg cattttttaa ttcaatgtta ccatttgact
     1561 ttgaagatat ttcaaagtcg cctccgcaat caggacatga aacaatttcg ccaaccacgg
     1621 catcgtctgg aatatttatt tctcctccac aatcactaca ttctttcttc attctattgt
     1681 tcttctcctt tattctcttt tttatttaaa ttaattgcta tagaatttgc agtaaccgat
     1741 tgtaatcccc ataattcaac aaaacccttc gctaatgttt gatcaaaaat agaaccagaa
     1801 gaataagttg ccaattcgtt tttgtataaa gagaattctg atcttcttcc tacaaccctc
     1861 atagaaccgt tttgcattct catctttact gttcctgtaa ctctgttttg cgttgcatct
     1921 ataaacctat ccaaatcgtt tactaatgga tcttgccaca gtcctgagta ggtcatccaa
     1981 ctccattgtt ggtctaccaa atgtttaaat cgtaattcat gggaagttaa aaccattttt
     2041 tcaagatctt ggtgtgattc gatcaagaca caagcagctg gacattcata aatttctctt
     2101 gatttgatac ctattactct atcttccata tgatcaatta tgcctacccc ataagaccct
     2161 gcctcgatat ttatgtaatt taccaaatct gtcaaattca ttctttgtcc ttctacagag
     2221 acaggaatac ctgcttcaaa atcaatttct aaatatccgg gtttcggatt atcaaacttg
     2281 acatatttga aacactcatc tagtggttca tttaatagat cctctagatc gccaccttca
     2341 atagatctgc cccataaatt ttcgtcaatg ctatatttct ttacctcagt atttacaggt
     2401 attttatgtt cgttggcaaa ctgtatttct ttatctcttg tcaggttcaa atcacgtatc
     2461 ggagcaataa tttttagatc aggatttaag catctaatag taatatcgaa tcttatttga
     2521 tcgttacctt tcccggtaca tccatgtgca atatattttg cattttcctt tgcagctata
     2581 tctacagctt ttttagctat taagggtctt gctaaggctg tagctaacgg atatcgattt
     2641 tcatacaatc cgtttgcttt tatagatgga atgatgtaat tttgggtgaa ttctgaggaa
     2701 gcatcaatat tataatgttt tatagcaccc acttgtttag atctatttgc tatctcttcg
     2761 aaatcatcat tctgtcctat gtttacggta acagtaacta catctagatc atgcaataac
     2821 tgtaaatact ttatacatac tgaagtatca agaccaccag aataggcaag tacacatttt
     2881 tctttaacca tagttaggcg atgccaataa ttacattaaa tttaaacttt ttggtgacat
     2941 tagaatcaga cactagaata agatactaaa ttatataatg tactgttggt aaaattgagt
     3001 gaacatgcca aatgtttttg tattctatca ataatcttac attattgtat agaagatata
     3061 caattgatga aattaaacat aaagttattg aaactctgaa aaagaatgat gcaggcatgt
     3121 ctagtgtcga attagctgat tcccttcatg taaatcgaat gaccataacg aaatatctta
     3181 acattttggc agtaatagga ttaattaaaa gaaagaaaat tggttcggta aatatttgga
     3241 cattggaacc gggcgtcatg gaattagaac ttcctttaaa ttatttgcag atacaacaaa
     3301 attttattac tgcattatta ggtaataata agaacgaaac aggtaaaata ttattaagta
     3361 ctatttattc agatagggat attattagaa taatcaaaga gatttttatt ccttctttta
     3421 atactttgaa tgagatttac aatcgaggaa gattgggaga aacagaatta atttcgttaa
     3481 ataaccaatt atttgacttg atgattttac tcttgcagca tcatcataga gaaacagcta
     3541 attataatgt atataatata ttcatagctg gaaatgaaga tcaaacatat aattctaaaa
     3601 ttgcttcaat agcatctgaa ataataggat atcatactaa ttatgtagga aatatagaac
     3661 ttcatataga tccctttttt gatatagaca ttcaaagata tataaccaaa tcatgggatc
     3721 gtaaaaaagg attgaagaat atttttatct tttcctcaga agaaacttct cttcgatttc
     3781 tatttacaac tgcgaaattt ttaaaaaata aattgactga agaaatcaag ataatcatat
     3841 ttgtaaaacg agaaattttg tcgatcgcta aagacctcaa tccggattat gtaacctcgg
     3901 atattaacag tttaattgca tggcaggaag atttgaaaaa acatttctag gatcaataaa
     3961 tttggaggta agatatagaa ttctttattg aatcgtttaa aacgattgtt tgtcataaat
     4021 cgtatttttt tgatattttt tttatataat taagaccgta tttaagatct agtgtatagt
     4081 ttttacgggg aagaatagtt tcaaaactga ttttattttt gtaattaata ttttttaatg
     4141 attttattat caagtcaaaa tctatatgac ctcgtcctgg cattagtcta ttattatcag
     4201 ataagtgaat gtgttttaga aattttttac tgtcattgat tacttcagca aaattttttt
     4261 cctcaatatt catgtgatat gtatctaata agaggagtag gtggtcatga ctaatctttg
     4321 aagaaagatc tatagcatct tttgcttgaa caaaataggg tgtcgaatat ctattcaagg
     4381 gttctaataa gatatatacg ccatattctt gggagaattt tgatagatct gataaaattg
     4441 acgttattcg ttgcaaagat ttcgtttttt ctcggg
//
LOCUS       DATIAS010000092         3183 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_699178, whole genome shotgun sequence.
ACCESSION   DATIAS010000092 DATIAS010000000
VERSION     DATIAS010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_699178"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            336..1151
                     /locus_tag="VLA74_01775"
     CDS             336..1151
                     /locus_tag="VLA74_01775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49463.1"
                     /translation="MEKKQGIKFSDKEKLVRTLYSKIKNYKNVENEKQNNRNMDLEQD
                     NLDLIQKSNFDNLIIDEHSLDHPNLLKEPSISKIEQIIYEIKSSNNEEKEHKFNELEE
                     LARYKRLYNNKKILALCDKYLLSNNDYSLLSRVLDFVKRLLSTSIEIDKSNYFLNYVR
                     SKYSEKFREIILSTEKEYRGAQNYVRQILEWYGVFDDDDISKLYWQSIKNHIEVEDLE
                     INEFQLCISPYINKIKQSDDFILKCRSEIFEMTKLNDEKIKQRAELLMKLFRN"
     gene            1359..1550
                     /locus_tag="VLA74_01780"
     CDS             1359..1550
                     /locus_tag="VLA74_01780"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HSF49464.1"
                     /translation="MKIFISYSRRDASGTAKEVHDYLTEIGHHEVFINTSDIRRGDEW
                     RNTIQEILYKMKFLHVIFF"
     gene            2286..>3183
                     /locus_tag="VLA74_01785"
     CDS             2286..>3183
                     /locus_tag="VLA74_01785"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49465.1"
                     /translation="MNSLFLEEVPCEEFNAEETFFPSLFPPQVDQPLKKFLDSESNNN
                     AATNLGKLADINDLINNGNLLLSKGENYEAIKYYDAVLEREPTNKYALNNKGIALYNE
                     GKIKEAGLYYNKAISIDHVFYDALYNMGLVQLDSSSYKSAKDCFKRALEIKPDSVDAL
                     NSLGVAEMENGIELNQMYAEATRTWNQWIAIMEDVMKDDNTTGTQIKVQFTDRDDSNI
                     NSAEKILMYPLIVTLQNSIQRYDMALEPDADNINLINNKVKEVEKKVRQELENSIQNY
                     DIALGLKADNINIMVNKIEALYE"
BASE COUNT         1292 a          391 c          501 g          999 t
ORIGIN      
        1 acctgatcag gataacaagg caagaagctg catacatgat tagcaggagt aaacgtcagt
       61 tgcagcgagt ggtaaaaagg ttcagagaag aaggtattat aggtctgagg ttcagatcca
      121 aaagacgaca taacagtcca aacaggactc ctaacaatat agaaaaggat agttgaggta
      181 aaagaaatgc taccggtttt ggttcagaac agctggtaaa tattgtaaat gagagtcctc
      241 atgtagaaga tgaagttcta tatgcgcaaa gagaagacaa gataattgtt ccatgtataa
      301 atgaagatgt tgaatatagc aaaataaaat ggggtttgga gaaaaaacaa ggtataaaat
      361 tttcagataa agagaaatta gtcagaacac tttactcaaa gattaagaat tataaaaatg
      421 tagaaaatga aaaacaaaat aatcgtaata tggatttaga acaagataat cttgacttaa
      481 ttcaaaaatc aaattttgat aatttgataa ttgatgaaca ttcattagat catcctaacc
      541 ttttaaaaga accatctata tctaaaatag aacaaattat ctatgaaatt aaatcttcta
      601 acaatgaaga aaaagaacac aaatttaatg aattagaaga gttagcaaga tataaaagat
      661 tatacaacaa taaaaaaatc ttagcattat gtgataaata tcttctttca aataatgact
      721 actcattatt atccagagtc cttgattttg taaaacgatt actttcaact tctatagaaa
      781 ttgataaatc taattatttt cttaattatg tacgttcaaa atactcagaa aaatttagag
      841 aaataatatt atctactgaa aaagaatata gaggtgcaca aaattatgta agacaaattt
      901 tggaatggta tggagttttt gatgatgatg atataagcaa attgtattgg caatcaatca
      961 aaaatcatat tgaagtagaa gatttagaaa ttaatgaatt tcaactatgt attagtcctt
     1021 atattaataa gattaaacaa tcagatgatt tcatactaaa atgtcgatct gaaatatttg
     1081 aaatgacaaa acttaatgat gaaaagataa agcaaagagc cgaattgtta atgaagttat
     1141 tccgaaattg aatacatatt tgtctatata tattaaatct gtgaatttag caataaattc
     1201 ttctaaagta gatgttgaaa cttaatgtca gtttgttaaa ccacttattg tcctaatttt
     1261 ttcggtacct catttttttt attacataat agattttctg aatcatattg ttaaagaaat
     1321 aaactttaat acattaatat cacttttaga tattcatatt gaaaatattc atctcctact
     1381 ctagaagaga tgcttcagga actgcaaaag aagttcatga ttatttaact gaaattgggc
     1441 atcacgaagt ttttataaat acttcagata ttcgtcgcgg agatgaatgg agaaatacta
     1501 tacaagaaat actatacaaa atgaaatttc tacatgtgat atttttctaa taatagttaa
     1561 cgttcttccc ttagacaata agaagtaaag aatgaagtag aattagcaaa aacttaaaca
     1621 aaaagataat tccctgtata gctaaagatg atgtcaacaa aaatgaaata aaatgggaac
     1681 taaacaaata tcaagaattt tatgatagag atacaaaatt agctatggac cttcacaaga
     1741 tgataaaacg tgaaactaaa agaaaaactt cagaagtaga agaagaaatt gattaactct
     1801 tagaaacctt taagtaattc caaattattt taatatgatt aattgttgat tattttatga
     1861 ttaaggaaaa ttttaagcta aatcgtgaca aatcatatat ttttttaaca atttttttat
     1921 ttcttatacc gtcatgttat ataatttttt taataaatcc caatattctt attaaaaata
     1981 gttttggtga ttacagcaca gagttaagta attctttttt atcatattct aaaaattatt
     2041 ctgaaaatga gtcgatgatc gttattgaga aaacatcgaa taagaaacct acgttctatc
     2101 atgatattgc tattagaaaa tatttagatg attcgaacag ttttggtatt cccaactaaa
     2161 atttaggtga ttcgaacagt tttggtattc ccaacgaaaa tttaggtgat tcgaacagtt
     2221 ttgttaatcc cccttgtgaa ttagatcctt ttaaaatgca tacaaattca gaatgtttaa
     2281 ataagttgaa ttcattgttt ttagaggaag ttccttgtga agaattcaat gctgaagaaa
     2341 cattctttcc atctctcttt ccccctcaag ttgatcaacc attaaaaaaa tttcttgatt
     2401 cagaatcaaa taataatgca gccactaatt taggcaaatt agcagacatc aatgatttaa
     2461 ttaataatgg aaatttgtta ctaagtaagg gagaaaacta tgaagctata aaatactatg
     2521 atgctgttct agagagagaa cctacaaata aatatgcatt gaacaacaaa ggtatagctc
     2581 tatataatga aggaaagata aaagaagcag gtttatatta taataaagcg atttcaatag
     2641 atcacgtgtt ttatgatgca ctttacaata tggggttagt ccagttggac tcatctagtt
     2701 acaaaagtgc gaaggattgt tttaaaaggg ctttagagat taagcccgac tctgttgatg
     2761 ctttaaatag cttaggtgta gcagaaatgg aaaatggaat agaacttaac caaatgtatg
     2821 cagaggcgac tagaacatgg aaccagtgga ttgcgattat ggaggatgtt atgaaggatg
     2881 acaatacaac tggtactcaa attaaagttc aattcacaga cagagatgat agcaatatca
     2941 attctgcaga aaaaattttg atgtaccccc tgatagtaac attacaaaat tcaattcaaa
     3001 gatatgacat ggcattggaa cccgatgctg ataacattaa tcttataaac aataaagtaa
     3061 aagaagtaga aaaaaaagtt agacaagaat tagaaaattc aattcaaaat tatgatatag
     3121 cattgggatt aaaggctgat aacatcaata ttatggtcaa taaaatagaa gccctttatg
     3181 aat
//
LOCUS       DATIAS010000093         6805 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_972346, whole genome shotgun sequence.
ACCESSION   DATIAS010000093 DATIAS010000000
VERSION     DATIAS010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6805
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972346"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..1539)
                     /locus_tag="VLA74_01790"
     CDS             complement(241..1539)
                     /locus_tag="VLA74_01790"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSF49466.1"
                     /translation="MSELNRRMGLFHLTMYGVGLILGAGIYVLIGEASGFAGDAVWIA
                     FVLGSIVALFAGLSYAELSSIFPKAAAEYIFVKNAFKNNFFAFIIGWLTVITSMITAA
                     TVALGFGGYFSEFLNIPIVISAIILIGILSIVNFVGIRESSWTNTVFTIIEATGLILI
                     IIIGFTISDPEPVNYFESPTGFTGIIIAFVLIFFAFIGFEDMANVAEEVRNPKKVIPK
                     AIILSVMISGLVYVLVSLAVVRVINWQDLSLSAAPLADVAERGLGIQGHIIFSGIALF
                     AITNTVLITLVAGARMIYGMARDNSFPNFLTKIHSKTKTPWIAVITIMVVAISFSFIG
                     DIVIVANITVFAVVITFGAINLSVIVLRYTEPDIERKFRIPINIGKFPVLPIFGLGIS
                     VYMSLQFEIEVILVGFGIIAAGSIYYIIFNKKITRQKNKN"
     gene            complement(1602..2450)
                     /locus_tag="VLA74_01795"
     CDS             complement(1602..2450)
                     /locus_tag="VLA74_01795"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF49467.1"
                     /translation="MKKNLFPVITVNPESSIFDVLLQMQTNFVKHIVVTINNIPVGIV
                     TERDINKFLEEDKTAHAINEIPIKHVMKKNVITISEGIEDYFEQCAARMETFKIGSIV
                     IVNDNGELAGIISRTDLVKSFAVIFGGKYLVKNFMSRNVVTCRKTDSIKFAIRIMNKN
                     QVSRLVVTNDDGYPIGLISTNTLLTHSDYFTKGSTRSRDYLIPINAEKLTVSDLLTDE
                     LLTINEEEDLVVAANKMIKNKISGIPVVDSNNNLVGIISKTDVVRALSIVKPHEKLRS
                     QYKELY"
     gene            complement(2533..2865)
                     /locus_tag="VLA74_01800"
     CDS             complement(2533..2865)
                     /locus_tag="VLA74_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018039501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSF49468.1"
                     /translation="MQQLISGKKIDDDSRKDAILEVISDKYCRSILENTREKPKSAME
                     ISGETKIPISTVYRRLQTLHDNKLLAISGSISDDGKKYFLYKSKVKAISTSYIGNNIE
                     VEIVPNTC"
     gene            3027..3929
                     /locus_tag="VLA74_01805"
     CDS             3027..3929
                     /locus_tag="VLA74_01805"
                     /inference="COORDINATES: protein motif:HMM:NF014867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49469.1"
                     /translation="MISIIGSGKVGTAIAFLCISTSLDDVLLVNRTKDKAIGEALDIS
                     NAVPENSNVSIHGTDDFSKIIDSDIIVITASTGTYLKSRTEMMGAQVKMIKNIAKEIK
                     KYCPSAIILVVSNPLDVLTYVFQKETKISRNKVIGIASSLDSSRFRYLLSEKFNLNQS
                     QINNVIVLGEHGDSMVPIFSRVKINKMNLLEMIDETEQNLITTEIRNYWKSLRKFKSR
                     SQFGIAKNTFDVISSIIKNNELIVPASIVLNGEYGEKDVSMGIPVKINKDGIKEIIEV
                     KLNQSEYNLLKISAQAIRDCINSL"
     gene            complement(3945..4628)
                     /locus_tag="VLA74_01810"
     CDS             complement(3945..4628)
                     /locus_tag="VLA74_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HSF49470.1"
                     /translation="MKLHFDDFIYGSIDGAVTTFAIIAGVIGASLSPGIILILGFANL
                     FADGFSMAAANYQATKARNQFIEMKRKQEEWEIDNLEEQEKEEIREIYKKKGFKDELL
                     EEVVRIITSRRKVWVDTMMKEELGLIEDEKNPLESSVSTFIGFNLIGLIPLIPFMIFI
                     LMKIDANSEAFVYSTISVMASFFLVGMIKGKIVKKPKIRSGFYTLIIGGIASLVAYYV
                     GYGLKILIQ"
     gene            4763..5233
                     /locus_tag="VLA74_01815"
     CDS             4763..5233
                     /locus_tag="VLA74_01815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49471.1"
                     /translation="MKDKFFVIIILMIGIMGFAAIIGVIGQGNVRHVQIFWPEKIEQT
                     VAFIDIDDEVKLIGISGTSEDNNPTLIMRISFAYVLTVENRGNQHHRLYIDGFNIQTD
                     LLEPGQKDTIVIYPDKEGTFNYYDKRQYLSKLGQLKAVQVTPSDSFTGFLKDMI"
     gene            5324..6478
                     /locus_tag="VLA74_01820"
     CDS             5324..6478
                     /locus_tag="VLA74_01820"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSF49472.1"
                     /translation="MVESNYDILGILEGSTEHEIRNAFRRLALLYHSDKGGENDQFIK
                     IKQAYEDLKIGKKYPETDLEKIRNSRVYSGDSEEDIRRKNQILGQELFKEMKLAEEWA
                     AELNRTNSTGTKLFGSKSLGEIEFERKANGILSIKGNFMAGNLTYDGPIIMQGNITSP
                     SWIEEFRTNIHLTKGDFRFINPLENKYKIENGSRVIVDNGDIVVGNIFGRKYKIHDSD
                     GRVGIFKTQEQRTFVSAPNGKIIAENIINTVSLEADVIMVLNLEDDVEINAREILFYG
                     NKITYDSKIKLKKGGMIRFFENFSIQSLSNDALIKLENGKEIRLFDIKTKKIKDLPDE
                     FVPNKNEYDKDATMVGNGFTITYEMLNNLSKKPTKNQKSKWGSKFKISKD"
BASE COUNT         2519 a          999 c          923 g         2364 t
ORIGIN      
        1 cacttcttgg agaagtaaat aatttaaaaa aatcattcac tgaattagaa caatctaatc
       61 aacaaatgaa tgtcagttat gtagcaatta gcataggtat cttagcattt attattgcat
      121 caattactct ttttaaaatt cgaaaataat tatttcatta aattaacttt agattacaac
      181 atttttatat aaatatgatt tttgagattc aaacaaatat tacagaaatt atatagatca
      241 ttaattctta tttttttgcc ttgttatttt tttattaaaa attatgtaat atattgaacc
      301 agctgctata attccaaatc ctactagtat aacttctatt tcaaactgaa gtgacatata
      361 cacagaaatc cctaatccaa aaattggtaa aactggaaac ttgccaatat tgataggaat
      421 tctaaacttt cgttcgatgt ctggttctgt atatcgaagt acaatcacag acaaatttat
      481 tgcaccaaaa gttatcacaa ctgcaaaaac tgtaatattt gctacaatta caatgtcacc
      541 aataaaagaa aaactaatag caactaccat aattgtaata actgctatcc acggtgtttt
      601 agttttcgaa tgtatttttg tcagaaaatt tggaaatgaa ttatctcttg ccataccata
      661 aatcattctt gcacctgcta ctagtgtaat caatactgta tttgttatag caaaaagtgc
      721 aataccagaa aatattatgt gaccctgtat gcctaatcct ctttctgcaa catctgctaa
      781 aggtgcagct gataatgaaa gatcttgcca attaattact ctaaccacag ctaatgaaac
      841 taagacatag acgagtccgc ttatcataac tgataaaatt attgcttttg gaattacttt
      901 tttgggattt cgtacttctt ctgcaacatt tgccatatcc tcaaatccaa taaatgcaaa
      961 aaaaatcaat acaaatgcaa taataatacc tgtgaaacct gttggacttt caaaataatt
     1021 aactggttct ggatcactaa tagtaaaacc aattatgata atcagaatta atccagtagc
     1081 ttcaattatt gtaaaaactg tatttgtcca tgatgattct ctaattccta caaaatttac
     1141 tattgaaagt attcctatta gtataattgc agatattact atgggaatat tcaaaaattc
     1201 tgaaaaatat ccaccaaatc ctaaggcaac tgttgctgcc gtaatcatgg aggtaatcac
     1261 tgttaaccat cctataataa atgcaaaaaa attattttta aatgcatttt ttacaaatat
     1321 atattctgca gctgcttttg gaaaaattga tgataactct gcatagctga gtccagcaaa
     1381 taatgcaaca atagatccta aaacaaatgc aatccatact gcatcacccg caaaacctga
     1441 tgcctcccct attagcacat aaattccagc tcccagaatt aatcctactc catacattgt
     1501 tagatgaaat aatcccattc gacgatttag ttcagacatt ttattactcc attattgttt
     1561 aaagtaaaac taatcaattc aatatttgaa taatttttaa gtcaatacaa ttccttgtac
     1621 tgtgatctta atttctcatg cggttttaca atagaaagag cccttacaac atcagttttg
     1681 ctaataattc caactagatt attattcgaa tctacaacag gaattccact aattttattt
     1741 tttatcattt tgttagctgc tactactaaa tcttcttctt cattaattgt taaaagttca
     1801 tcagttaata aatcactaac agttagtttt tctgcattta ttggaattaa ataatctcga
     1861 gaacgtgtac tacctttagt aaaataatca ctatgtgtta ataatgtatt agtgctaata
     1921 agaccgatag gataaccatc atcattagtt acaaccaatc ttgaaacttg atttttattc
     1981 attatcctta ttgcaaattt aatcgagtca gtttttctac atgtaacaac atttctactc
     2041 ataaaatttt tcaccaaata ctttccacca aatataacag caaaagattt cactaaatca
     2101 gttcttgaaa taattccagc taattctcca ttgtcattaa caataactat ggagccaatt
     2161 ttgaaagttt ccattctggc tgcacattgt tcaaaataat cttctattcc ttcagatatg
     2221 gtaattacat tttttttcat cacatgttta attggaattt catttattgc atgcgcagtt
     2281 ttatcttctt ctaaaaattt attgatatcc ctttcggtta caattcctac aggtatattg
     2341 ttgatggtaa ctactatatg tttaacaaaa tttgtttgca tctgtaataa tacatcaaaa
     2401 attgatgact ctggattaac agtaattaca ggaaacaaat ttttcttcac attaattatg
     2461 tttataattt tcatttaaaa ctaaacttag attatcaaat ttgatttcaa taaaataaaa
     2521 aataactagt acctaacagg tattaggtac aatttcaact tcgatgttat ttccgatata
     2581 tgatgtagat atggccttaa ctttactttt gtacagaaag tatttcttgc catcatcact
     2641 aatcgaacca gaaattgcca gcaatttgtt atcgtgtaag gtttgaagtc ttctgtaaac
     2701 agtgctaatt gggattttgg tttcaccact tatctccatt gctgattttg gtttttctct
     2761 ggtgttttct aaaatagatc gacaatattt gtctgatatg acctcaagaa ttgcatcttt
     2821 ccttgaatca tcatctattt ttttgcctga aattaattgt tgcatggcta cttattttat
     2881 taattagata taacaagtag gaccgcattg caatgcaatg caatcaattt gctttggaat
     2941 tatgatatgg gatttaaatt atacatttta atcaatttaa acaatttgtt atatcttaat
     3001 tataaaacag aagagatgaa ttatctgtga tctctataat aggtagcggt aaggttggca
     3061 ctgcaattgc ttttctatgt atatctactt cattagatga tgtattatta gtaaatcgta
     3121 caaaggataa agccataggc gaggcactag atatatcaaa tgctgtacct gaaaactcta
     3181 atgtttcaat tcatggaact gatgattttt ctaaaataat tgattctgat attattgtaa
     3241 ttacagctag tacaggaact tatctaaaat ctagaactga aatgatgggt gctcaagtta
     3301 aaatgattaa aaatattgca aaggaaatca aaaaatattg tccttcagca ataattctag
     3361 ttgtttctaa tccattagat gttctaacat atgtttttca aaaagaaact aaaatatcaa
     3421 gaaataaagt aattggaatt gcatcaagtt tagattcaag tagatttagg tatttacttt
     3481 cagagaaatt taatctaaat caatctcaaa ttaataatgt aatagttttg ggcgaacatg
     3541 gagattctat ggtaccaata ttttctagag taaaaatcaa taaaatgaat ctacttgaga
     3601 tgattgatga aacagaacaa aatctgatta caactgaaat cagaaattat tggaaatctt
     3661 tgagaaaatt caaaagtcgt tctcaatttg gtattgctaa gaatactttt gatgtaatta
     3721 gttctattat taaaaataat gaattaatcg tgcctgcatc aattgtatta aatggtgaat
     3781 atggtgaaaa agatgtttca atgggaatcc ctgtaaaaat aaataaagat ggaattaaag
     3841 aaattataga agtaaaacta aaccaatctg aatataattt attaaaaata tcagcacaag
     3901 ctatacgaga ctgtataaat tcactttaat taacacacaa ctaattattg aattaaaatc
     3961 tttaatccat atcctacata atacgcaact aatgatgcaa ttccaccaat tattaatgtg
     4021 taaaaacctg atcgtatttt tggtttttta acaatttttc ctttaatcat acctacaaga
     4081 aaaaatgatg ccattactga gattgtagaa taaacaaatg cttctgaatt tgcatcaatt
     4141 ttcattaata taaaaatcat aaatggaatt aatggaatta accctatcaa gttaaatccg
     4201 ataaaagtgc tcactgagct ctcaagtggg tttttttcat cctcaattaa tcccagctct
     4261 tctttcatca ttgtatccac ccaaactttt cgtcttgatg taattattct aacaacctct
     4321 tctaacaatt catctttgaa tccttttttc ttgtaaatct ctctgatctc ctctttttct
     4381 tgttcttcca agttgtcaat ttcccattct tcttgttttc ttttcatctc gataaattga
     4441 tttctagctt ttgttgcttg ataatttgct gcagccattg agaatccatc tgcaaataaa
     4501 ttggcaaatc caagaattaa aataattcca ggagataatg aagcaccaat aactcctgca
     4561 attattgcaa aagttgtaac tgcaccatca atggaaccat aaataaaatc atcaaaatgt
     4621 agtttcataa tttttaataa acacgttcat tatttaacaa atattcctac tttggttata
     4681 aaatagctat ttttacttta atttacaatt atgaaattct acatctagta aaaatactat
     4741 gaactgttat gttattataa aaatgaaaga caaattcttt gttattatta tattgatgat
     4801 aggaattatg ggatttgcag caattattgg tgtaataggt caaggaaatg taagacacgt
     4861 tcaaattttt tggccagaaa aaattgaaca aactgttgcc tttattgata ttgatgatga
     4921 agtaaaacta attggcattt ctggtacatc tgaagataac aatccaacat taattatgag
     4981 aattagtttt gcttatgttc ttactgtcga aaatagaggg aatcaacatc atagattata
     5041 cattgatggt tttaacatac aaactgatct attagaacct ggacaaaaag acactattgt
     5101 aatatatcct gataaagaag gaactttcaa ctattatgat aaaagacaat atctttcaaa
     5161 gcttggtcaa ctaaaagctg ttcaagtaac tccctctgat agttttactg gatttttaaa
     5221 agacatgata tagatttcat ttaatgaaaa ttctcaacat tttatatcgt aataaactaa
     5281 aagtatagga aatatgaaaa gaataaccaa aaactgaaag aaaatggtgg agagtaacta
     5341 tgacatattg ggaattcttg aaggctcaac tgagcacgaa attcgtaatg cattccgaag
     5401 attagcattg ctttatcatt ctgataaagg aggagaaaat gatcaattca taaaaatcaa
     5461 acaagcatat gaagatctca aaattggtaa aaaatatcct gaaactgatc ttgaaaaaat
     5521 tagaaactct agagtttatt ctggtgattc agaagaggac atacgaagaa aaaaccaaat
     5581 tttaggccaa gagctattca aagaaatgaa attagcagaa gaatgggcag cagaacttaa
     5641 tagaacaaat tcaaccggca ctaaattatt tggttcaaaa tctcttggag aaattgaatt
     5701 tgaaagaaaa gctaatggta ttctgtcaat caaaggaaat tttatggcag gaaatctaac
     5761 ttatgatggc cctattatta tgcagggaaa tattacaagt ccatcttgga ttgaagaatt
     5821 tagaacaaat attcatttga caaaaggaga tttcagattt attaatccgc ttgaaaataa
     5881 atacaaaatt gaaaatggtt ctagagtaat tgtagataat ggtgatattg tggtcggaaa
     5941 tatttttggt cggaaatata aaattcacga ttcagatggg agagttggaa tttttaaaac
     6001 tcaagaacaa cggacttttg tatctgcacc aaatggaaaa attattgcag aaaatataat
     6061 caatacagtt tctcttgagg ctgatgttat tatggttctt aatttggaag atgatgttga
     6121 aattaatgcc cgagaaattt tattttatgg aaataaaatc acttatgatt ctaaaattaa
     6181 attaaagaaa ggcggtatga taagattctt tgaaaatttc tcaattcaga gtcttagtaa
     6241 tgatgcactt atcaaacttg aaaatggtaa ggaaattagg ttatttgata ttaaaactaa
     6301 aaaaattaag gatttacctg atgaatttgt acctaacaaa aatgaatatg ataaagatgc
     6361 cacaatggta ggtaatggat ttacaattac atatgaaatg ttaaataatt tatcaaaaaa
     6421 accaacaaaa aatcaaaaga gtaaatgggg ttctaaattt aaaatttcta aagattaagt
     6481 attttttaaa ttatatatta aaaaatcaac tttaaaacaa gaataattcc tttatgataa
     6541 ctaatgatgt catagtaaag ctattcttat tatagaaaat acacgaagaa ttgatattgt
     6601 ataaaaataa caaaaattga ttgcaaattt cctttagtat agataaaaaa ttgatatttt
     6661 tagtaattat agtatcttta attacacttt tggttacagc ttatttgagc tttaactatg
     6721 ctgaacaaat tctaatagaa agagctagcg atctattatt aggcgaatca gctacacgtg
     6781 gtaatgctat tagacttctt tttga
//
LOCUS       DATIAS010000094         2843 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1789872, whole genome shotgun sequence.
ACCESSION   DATIAS010000094 DATIAS010000000
VERSION     DATIAS010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789872"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..782
                     /locus_tag="VLA74_01825"
     CDS             192..782
                     /locus_tag="VLA74_01825"
                     /inference="COORDINATES: protein motif:HMM:NF022387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2634 domain-containing protein"
                     /protein_id="HSF49473.1"
                     /translation="MGADLNLQEKGLGSDLVVSPTGDLVIVSEEPNLAQAIISRLRTI
                     EGELYEIEHPTYGSRLYDFIGELNNNITRNRIRNYIKSTLMKEPRIKEIVKITVKSLI
                     INHSNNNNISNYHQHKIKNNKYTDNKLEVIDETTTFSADKLAKEESAAANSYRSLHTV
                     IIDITVIPIDQEIPLNLVFPFYLDIMTEVENVANVQ"
     gene            772..2439
                     /locus_tag="VLA74_01830"
     CDS             772..2439
                     /locus_tag="VLA74_01830"
                     /inference="COORDINATES: protein motif:HMM:NF016736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HSF49474.1"
                     /translation="MYNKKRYIEIVDDILQHITRGQTSEKHLFSNSTRIYKLESLPEN
                     KLVVGEIEVRGFLNANPHTFSYDKDYKIREKTSIEWNISENNSRDISRPDENSIFEVS
                     YVFNNSSGLTDVNTGSVIRTIVEGISKEIESLYDEMESVYKDGFIETSSGSSLDNVVS
                     LLGIKRKSPTRAYGYVTFFKNSEPDTVTNTEILLFDGIESYELKNKPIKKIKSIVGIY
                     QNNNYEFQLNKDYSLNLNDNTIVWLSDGKRPDEQRELTIEYETYQKVIIPSGTIVSTS
                     STNPKNIVSFETKQDVYMERKQEGKWEATIDIIAIDPGTSGNVIAGSINVMPKPPIGV
                     DRVINRSNTEGGSDFEYDADLRERAKKILDEKGKATVLSLQTAIESIEGVNSTKIIDM
                     PDEISGIVKVIVDGGDAKEIEKTIEETKAAGIRVEFDRPMIVLLDMRVILLVKKNIFN
                     KEQIIASAEKYIRNYLSSLKIGNSLIINQLISLLLSIEQVGDVKDLVIDAFREKQDKT
                     INLTAESSKMTYNRDNIVINYNERLYLRNIKIDILEDNIDVNTRPIR"
     gene            2414..>2843
                     /locus_tag="VLA74_01835"
     CDS             2414..>2843
                     /locus_tag="VLA74_01835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49475.1"
                     /translation="MLIQDPSDRIINRLPQFYKSWDKESILFSFIDSFANELRKQKKD
                     LVNIKRTHWIDTSYGKNLDLLANIFKLYRKQEEPDEDFRNRIKRFLFEFTGGGTKKSI
                     LAQSVAYLNLKEESEMPVLIENPLRIKKVKMTVQNGDRISI"
BASE COUNT         1161 a          348 c          492 g          842 t
ORIGIN      
        1 tggtactgta aatacagcac ttaaggctgg agttctcctc aatgtcgaat ccgaccaatt
       61 aagtaatata caatcatccg gaccaatgac aataaaaggt gctattgtaa atataaatcc
      121 atgattggat tgaatttatt attataaaag aagggggagg aaaagaaata ataacagata
      181 ataaagagat tttgggagct gaccttaact tacaagaaaa aggtttaggc tctgatttag
      241 tggtttctcc tacaggagat ttagtgattg tatcagaaga accaaatcta gctcaggcaa
      301 ttattagcag gcttagaact atagaaggtg agttatatga gatagaacat ccaacatatg
      361 gttcaagatt atatgacttt ataggagaac taaataataa tattactaga aataggataa
      421 gaaattatat aaagtctaca ttaatgaaag aacctagaat taaagagatt gtaaagataa
      481 ctgttaaaag tctaataatt aatcattcta ataataacaa tatttctaat tatcatcaac
      541 ataagattaa aaataataaa tatacagata acaaattaga agtaattgat gaaacaacaa
      601 ctttttcggc agataaattg gcaaaagaag agtctgctgc tgccaatagc tatcgatctc
      661 tacatactgt aataattgat attactgtaa ttcccattga tcaagaaatt cctcttaatc
      721 ttgtttttcc gttttacctt gatataatga cagaggttga aaatgtagct aatgtacaat
      781 aaaaaaagat atattgaaat tgtagatgat atacttcaac atattaccag aggacaaaca
      841 agtgaaaaac acttgttttc taattctact agaatttata aattagaatc tcttccagaa
      901 aacaaacttg tagttgggga aattgaagtc agaggatttt taaatgcaaa ccctcatact
      961 ttttcatacg ataaagatta taaaataaga gaaaaaactt ctattgaatg gaacatcagt
     1021 gagaataatt ctagagatat cagcagacca gatgaaaatt ctatatttga agtatcttat
     1081 gtctttaata atagttctgg tctaactgat gttaatactg gtagcgttat tcgaactata
     1141 gtagaaggta ttagcaaaga gatagaatca ctgtatgatg aaatggagtc tgtatataaa
     1201 gatggattta tagagacttc atctggttct tctctagata atgtagtttc tctactaggt
     1261 ataaagagaa agtcgcctac gcgtgcatat ggttatgtta ctttttttaa aaacagcgaa
     1321 cctgatactg taacaaatac agaaatattg ctatttgatg gaatagagtc ttatgaactt
     1381 aaaaataaac caataaaaaa aataaagtcc atagttggaa tatatcaaaa taataattat
     1441 gaatttcaat taaacaaaga ttattcattg aatttgaatg ataatactat tgtctggtta
     1501 tcagacggaa agaggcctga cgagcaaaga gaattaacta ttgaatatga aacttatcag
     1561 aaagtaatta ttcccagtgg gacaattgta tcaacttctt ccactaatcc aaagaatatt
     1621 gtaagctttg aaacaaaaca agatgtctat atggaaagaa aacaagaagg taaatgggag
     1681 gctactatag atattattgc aatagatcct gggacatctg gaaatgttat agcaggttcg
     1741 attaatgtta tgccaaaacc acctatagga gtcgatagag ttataaatag atcaaataca
     1801 gaaggcggtt cagattttga atatgatgct gatttgcgag aaagagcaaa aaaaatcctt
     1861 gatgaaaaag gaaaggctac agttttgtcc ttacaaactg cgatagaaag tatagaagga
     1921 gtcaattcaa ctaaaataat agatatgcct gatgaaattt ctggtatagt taaggttata
     1981 gtagatggag gcgatgctaa agaaatagaa aaaactatag aagaaacaaa ggctgcagga
     2041 ataagagtcg aattcgatag accaatgatt gtattattag atatgagagt tatactgtta
     2101 gtaaaaaaaa atatatttaa taaagaacaa attattgcaa gtgccgaaaa gtatattcgt
     2161 aattatttgt catcattgaa aattggtaat tctttaatta taaatcaatt aatatcgtta
     2221 ttattaagta tagaacaagt tggagatgta aaggatttag tgatagatgc atttagagaa
     2281 aagcaagata aaacaataaa tttgacagcg gaatctagta aaatgaccta taacagagat
     2341 aatattgtga tcaattataa tgaacgccta tacctacgta atataaagat agatattctg
     2401 gaggacaaca tagatgttaa tacaagaccc atcagataga ataataaaca gacttccaca
     2461 attttataaa agttgggaca aagaatcaat acttttttcg tttattgatt catttgcaaa
     2521 tgagttgaga aaacaaaaaa aagaccttgt taacataaaa aggacacatt ggatagacac
     2581 atcatatgga aaaaatcttg atttattagc aaatattttt aaactttacc gaaaacaaga
     2641 agaaccagat gaagatttca gaaatagaat aaaacgattt cttttcgagt ttacaggtgg
     2701 tggaactaaa aaatcgattt tggcccaaag tgttgcatat ctaaatttaa aagaagaaag
     2761 tgaaatgcca gtcttgattg aaaatccttt acgaataaaa aaagtaaaaa tgactgtcca
     2821 aaatggggat agaataagta ttc
//
LOCUS       DATIAS010000095         3053 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1789947, whole genome shotgun sequence.
ACCESSION   DATIAS010000095 DATIAS010000000
VERSION     DATIAS010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789947"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VLA74_01840"
     CDS             <1..593
                     /locus_tag="VLA74_01840"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2382 domain-containing protein"
                     /protein_id="HSF49476.1"
                     /translation="NYILVQKGMINREKFYIPKDQAESYDGDVLRFRFSEQDLSQFQR
                     EPLNIYGENSMQEQKTSQATKTETEQEEENIPLTEERVDVSKRLEENQATIFKEPIKE
                     TKTVEVPLTREEVSIERRPPSSDGSGSSNETETQSPPIQSPQEIKIPLKKEEAEVTKK
                     PYVKKVAVKKKAKTNKKKVTKDVVTSEELDTANIDK"
     gene            complement(1263..1817)
                     /locus_tag="VLA74_01845"
     CDS             complement(1263..1817)
                     /locus_tag="VLA74_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49477.1"
                     /translation="MSSEQISKHRISTRKTTKIEKVYRKQDENMELKDQHLLMEYTDP
                     VTYQDKNQKNIRRLTDFDDDNNVPQDQEQQQNVTSDAKEIANYSLDLHKDMINTYNSV
                     YFQLLHGISNSSSDDFTIPKRFMDYPFDNKNMYTNSISNGEKSLKLIDNIMTKNMDTF
                     IKSIELTKKFYKDVIESYWNCIKK"
     gene            complement(2231..2383)
                     /locus_tag="VLA74_01850"
     CDS             complement(2231..2383)
                     /locus_tag="VLA74_01850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49478.1"
                     /translation="MDLIYNKTGVRYHEIHISIGYYTSGAKPKVPQKRFVNTASIKDK
                     MKFKKE"
BASE COUNT         1102 a          446 c          404 g         1101 t
ORIGIN      
        1 gtaactatat acttgtacaa aaaggaatga ttaacagaga aaagttttac attccaaaag
       61 atcaagccga aagttatgat ggagatgtat taagattcag attttctgag caggatttaa
      121 gtcaatttca gcgtgaacca ctaaatatat atggtgagaa tagtatgcaa gaacaaaaaa
      181 caagtcaggc aacaaaaact gaaactgagc aagaagaaga aaatatacca ttgacagaag
      241 aaagagtaga tgtctctaaa aggttagaag aaaatcaagc aacaattttt aaagaaccaa
      301 tcaaagaaac taaaacagta gaagttcctt taacaagaga agaagtaagt attgagagaa
      361 gacctccaag tagcgatggt agtggtagta gtaatgaaac agaaacacaa agtcctccta
      421 tacaatcacc ccaagaaata aaaataccat taaagaaaga ggaagccgaa gttacaaaaa
      481 aaccatatgt taaaaaagtt gcagtaaaaa agaaggctaa aacaaacaag aaaaaagtaa
      541 ctaaagatgt agtaacatct gaagaactag atacagcaaa tatagataaa taataagtca
      601 aataaaattt tatttatttt ataattttat attactagat tatatactac tataaataat
      661 taataaataa ttataataag atttattgtt attatctaaa tccaaaaaga agtgccttga
      721 tgtacattca ggctatggta atataaaaat ttctagtatt atttaaaact ctaaaaaaaa
      781 tagtttcaca agtcaataaa tagtatagcc tttaggtatt gaaaacatat ccactacata
      841 tattatagga aaaaattgca aatagttata tcctagatta tcaacatcac aagataatcc
      901 aaccaattac aattaattta tctccaatta ttatatagtt taggatacaa aaatatcatt
      961 aaccaaagaa ttccacaaaa cctcatgtca aacctactac catagccatt tctatttctg
     1021 atgctcctta tatcatggct atggctttta ttattagtaa caagataatt tatatcaaat
     1081 tactaaataa tttgttgagc ttataatata atcataaaaa tatagcccaa ttgcatccta
     1141 aagccatagc cttctcgata atgtagtagt tgcccactat atatcgagaa gcatatggct
     1201 ttatactata ttccggaagt tgaaaaagat aagaaagaaa ttgtgatgag attattgctg
     1261 atctattttt ttatgcaatt ccaataactc tcaattacat ctttgtagaa tttctttgta
     1321 agttctatcg atttgataaa tgtatccata tttttagtca tgatattatc tatcaatttt
     1381 aatgactttt ctccgttact aattgaattg gtatacatat tcttattatc aaatggataa
     1441 tccataaacc ttttaggaat agtaaaatca tcactagaag aattggaaat accatgtaat
     1501 agttgaaaat atacagaatt ataggtattt atcatatctt tgtgaaggtc tagagaatag
     1561 tttgcaatct ctttcgcgtc actagtaaca ttttgttgtt gttcttgatc ttgtggcaca
     1621 ttattatcat catcaaaatc tgtcaagcgt cgtatattct tttgattttt gtcttggtag
     1681 gtaacaggat ctgtatattc cattagtaaa tgttgatcct ttaattccat attctcatcc
     1741 tgttttctat acactttttc aatcttcgtt gtcttccttg ttgatattct atgttttgag
     1801 atttgttcag atgacaatac aagtataaga ttaggtaaat tcttacttaa aaaatttatt
     1861 atacaagaat ataggattct taaacatgac ttccaatcta ttacaataat ctttattgtc
     1921 ttgtaatctt tgaacaatat ggttttgttc tatcaactac tattatacat ttaccaaatc
     1981 ttttctgtac atattttaga taatcaacaa caaatatact actgtatcat attaccgaaa
     2041 taactgttta ttaccatcta tagacagaca accaaaaaca attgttttct tacgagagct
     2101 agtaactgtt aattaggtct tttacctgta gagatccatt tttttcttct gattatataa
     2161 tcatatacaa atattgattc atcttgtaca agtacagtcc aatctgattt taaattggta
     2221 agaatctgtt ttactctttt ttgaatttca ttttgtcctt tattgaagca gtatttacaa
     2281 atcttttttg tggtactttg ggtttagccc cacttgtgta ataacctata gatatatgta
     2341 tttcatggta tcttactcca gttttgttgt aaataagatc cattacctgt ctgaaatctc
     2401 atccagtatt actgtcaact aattcttttc ttatttttac cattgtatct tttgatacat
     2461 ctgaagctcg accagttcct ggttattctc ttaatccatc tagtccacca tctcacgata
     2521 tcgcttgtac catttgtaag tccatgctct gaatttatgc aattcttttg ttacatttac
     2581 gatatgttgt ttatcttcta ttatgtgcct gcctaaaaat attctttctt ttacgtcagg
     2641 attggattct tgcttttgta tgctttatct aattttgatc gcaattagaa tatatcaaaa
     2701 gatagttagc taaaaatata tctacgatat ttagttagtt agtataatta gaatttgagt
     2761 attccagata tttttacatt taatctattt aataattttt tgctctctat taaatatgaa
     2821 gaacattata atagaataat atttaatttt gagatggaaa aaagaaagct taattattgt
     2881 ttataggttg gctggtagta gaaatacatc ttctaagtta agtctctaat cttttatcaa
     2941 cattgttcta tccattcagc ataaatatag aaatggattt agctttgtta tacatctttc
     3001 aacatgtgcc aaataatcct gttaggctag aattatctac tgtccagaaa aag
//
LOCUS       DATIAS010000096         2229 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_18549, whole genome shotgun sequence.
ACCESSION   DATIAS010000096 DATIAS010000000
VERSION     DATIAS010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18549"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VLA74_01855"
     CDS             <1..885
                     /locus_tag="VLA74_01855"
                     /inference="COORDINATES: protein motif:HMM:NF014031.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HSF49479.1"
                     /translation="EFAARWKILDIRFEAYGKDIMDSVKINDWVCEEILKFPHPLHIK
                     YEMFLDKGGKKISKSAGNVLTPQMWMKYGTPQSILLLLFKRITGTRHIEIDDIPSLMD
                     EYDLYEDVYFGKIKESNQSKLVKLRGIYEYVNHLNPPTNSYHHVPYRLIAQQTSLFEG
                     KERIDKVFERLKKYGLVRDKTRDILKKIELASNWTDDILVNEDKYDLTLDKKYNEALR
                     ELVSYLKTYKEQESDDISNYIQTLIYETSKKYEIQPKDFFRLLYKILINSDRGPKLGN
                     YLVDLGINRACEIIEKYL"
     gene            complement(1156..2217)
                     /gene="purM"
                     /locus_tag="VLA74_01860"
     CDS             complement(1156..2217)
                     /gene="purM"
                     /locus_tag="VLA74_01860"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HSF49480.1"
                     /translation="MSPLEISTYDKAGVNIKKIRSTQKNIGKMIFESYSFQEIGKIVS
                     GFGHYSGLINIGNHTLALHTDGVGTKVLVAQQMKCFDTIGIDCIAMNVNDIICTAAEP
                     FAFVDYIGLKKIDDELVKKIMKGLIAGAKIAKTAIVGGETAVIPEILAGNNDQMFDLA
                     GTAIGIIQNKRLILGNNIKIGDIILGLESSGLHSNGYTLARKVLSKYPIDEIPEFLTQ
                     SVGEELLIPTKIYVQPIMELIRDRKVTVHGLAHITGGSFTKLKRLNNKVRYNLYNLFP
                     PFGIFKQIQKDGNIDVKEMYRTFNMGIGFCIILPKANVDKTISIIEKNKIKVYQIGEV
                     DSKGNGNVIGKIGNKKYRL"
BASE COUNT          782 a          328 c          293 g          826 t
ORIGIN      
        1 gaatttgcag cacgatggaa aatattagat atccgctttg aagcatatgg aaaagatatt
       61 atggattctg taaaaattaa tgattgggta tgtgaagaaa tattaaaatt tcctcatcct
      121 ttgcatataa aatatgaaat gtttttagat aagggaggaa aaaaaataag taaatctgct
      181 ggaaatgtat taactcctca aatgtggatg aaatatggta cacctcaatc tattctttta
      241 ttactcttca aaagaataac tggaacacgg catatagaaa tagatgatat tccttcattg
      301 atggatgaat acgatctata tgaagatgtg tattttggta aaatcaaaga aagcaatcaa
      361 tcaaaattgg tcaaattgcg aggaatttat gaatatgtta atcatctcaa tccaccaact
      421 aatagttatc atcatgttcc atatagatta attgcccaac aaacctctct ttttgaggga
      481 aaagaacgta tagataaggt atttgaaaga cttaaaaaat atgggctagt ccgtgataaa
      541 acaagagata tactaaagaa aatcgagcta gcttctaact ggacagatga tattttggta
      601 aacgaagata aatatgattt aactttggat aaaaaatata acgaagcatt aagagaatta
      661 gtttcatatt taaagacata taaagaacag gaatctgatg atatatcaaa ttatatacaa
      721 acgttaattt atgaaacttc gaaaaaatat gaaatacaac caaaagactt tttcagatta
      781 ctttacaaaa tactaatcaa ttcagatcga ggaccaaaac ttggaaatta tctagttgat
      841 ctaggaatta atagagcatg tgaaataatt gaaaagtatc tataactcta tgtttttgat
      901 agttatttat tttttaaata aaagtaattt taagatttat aaaatttgat tatgtcaaat
      961 agttcttctt ataataatag tggtaacttt aataatagac tgatatcatt aatagtattt
     1021 attatcatta gattatattc actaactcat aataatttag tcttccatgt gaacctttac
     1081 atatatttat aatctaattt tcatttatta ttagattagt tggaatagat ttagtgatct
     1141 tcattctata ggattttaca atctgtattt cttatttcct atcttcccaa ttacgtttcc
     1201 gttacctttt gaatctactt ctcctatttg gtaaactttt attttgttct tttctattat
     1261 actaattgtc ttgtcaacat tagcttttgg taatattata caaaagccta ttcccatatt
     1321 aaaagttctg tacatctctt taacatctat attaccatct ttttgaattt gcttgaatat
     1381 tccaaaagga ggaaataaat tgtaaagatt gtatcttact ttattattta aacgctttaa
     1441 ttttgtaaat gatccccctg ttatatgtgc caagccatgt actgtaactt tcctatctct
     1501 tattaattcc attattggct gtacatagat tttagttgga ataagtaatt cttctccaac
     1561 cgattgggtt aaaaattctg gaatttcatc tattggatat tttgataata cttttcttgc
     1621 taatgtatat ccatttgaat gcaaaccact actttctaat cccaatataa tatcacctat
     1681 tttgatattg tttccaagaa ttaacctctt attttgtata attcctatgg cagtaccagc
     1741 aaggtcaaac atttgatcat tgttgcctgc taatatttca ggtataacag cagtttctcc
     1801 tcctacaatt gctgttttgg caatttttgc acctgcaatt aaacctttca taattttttt
     1861 taccaattca tcatcgattt tttttaaacc gatataatct acaaatgcaa atggttctgc
     1921 tgccgtacaa ataatatcgt taacattcat agctatacag tctatgccta ttgtatcaaa
     1981 acatttcatt tgttgtgcaa caagaacttt agttccaacg ccgtcggtat gtaatgctaa
     2041 ggtatgattt ccaatattta ttaaaccaga ataatgacca aatccagaaa caatttttcc
     2101 tatttcttga aaagaatatg attcaaaaat catttttcca atattttttt gcgtagatcg
     2161 aattttttta atattaacgc ctgctttgtc ataagtacta atctctaaag gagacaatac
     2221 atcctacta
//
LOCUS       DATIAS010000097         3161 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1109003, whole genome shotgun sequence.
ACCESSION   DATIAS010000097 DATIAS010000000
VERSION     DATIAS010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3161
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1109003"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..648
                     /locus_tag="VLA74_01865"
     CDS             109..648
                     /locus_tag="VLA74_01865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49481.1"
                     /translation="MNAQFTLAKREKNSVQEKIIHFIIKFPGVRYRELLRLTGLSNGV
                     LTYHLNILDHSGKVKIDRINNRVTRYYSKDISDKESKILAILRQKSTRNVLLFITYHD
                     SCTFNEIVAYTHKVPSTVSWYLMRLKESNMIRIRRYKDYNVYNLSIDKTFLLDTLHKY
                     NKSLSSDIVEDYVEMMEEF"
     gene            complement(1091..2131)
                     /locus_tag="VLA74_01870"
     CDS             complement(1091..2131)
                     /locus_tag="VLA74_01870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49482.1"
                     /translation="MREINIYFVTILICLFLLSFLTSSKGFLSISQIENAYANGIKNN
                     FGRDLLPPLNLDNTPLGLWIEFKPSIVDSHVEEKRQLIFKLIDTENNSTQNPKSMEVI
                     ILKNNFRNNNITEDLFLNDTFNLRNDSLVLEFNSAKKESGKMGKYNNSMINSKIEADI
                     NGTVYVNYPILESGIYHLKIKTNMKDNKGLNGQNFLKFDSYLSLGNILNINNFSQNKN
                     DNLTILSYNDQILKYEYNNNTNEVSFEIPFKYNLTRIEEGFIYIHTELKIPNHFKKFF
                     NAKSSIIKINDINFGEISKSSVSIDRFSNSSYLIIHFILDSNSLFKLAKDRTEKGLDN
                     SEMILKFSFLPR"
     gene            complement(2212..>3161)
                     /locus_tag="VLA74_01875"
     CDS             complement(2212..>3161)
                     /locus_tag="VLA74_01875"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSF49483.1"
                     /translation="TIIRNGTLEEKSAILQSRPDSETLSKVGEHPSLGVTGINVTPEI
                     ANAMNLTEAKGFLVIDVNSNSPADKAGIRGGDKIYGIDGREVELGGDIIIAIDGNPVR
                     KIDDILTHLELEKSVGDKITLTIIRNGTLEEKSAILQARPDSETLSKVGEHPSLGVTG
                     INVTPEIADAMNLTEAKGFLVIDVNSNSPADKAGIRGGYKVEIINNTQIRLGGDIILG
                     IDDIKINNVTDISKYLETKKEGEIVKIAVIREGKPLNISATLEILSEPELPENFKLEP
                     FEDGGPKDFDEFGKGRYLEQLKRECLKHFNDSICSFLFR"
BASE COUNT         1030 a          507 c          429 g         1195 t
ORIGIN      
        1 agatatttac ggtatgctta ttccaattac taatatagaa ctttctcacc tcattctact
       61 aattatggtc attttttttg gtataagttt tctgaaaggt gctaataaat gaacgcacaa
      121 tttactctag caaagagaga aaaaaattca gttcaagaaa aaataattca ttttattatt
      181 aaatttccag gagtcagata cagagaattg ttaagactga ccggactttc taatggtgta
      241 cttacgtatc atttaaatat attggatcac tccggtaaag ttaaaatcga cagaattaac
      301 aacagagtaa ctagatatta ttctaaagat atatctgata aagagtccaa aattttagca
      361 atattgagac aaaaaagtac aagaaatgtt ttactgttta taacgtatca tgattcttgc
      421 acctttaatg aaatagtagc ttacacccat aaggttccat caactgtctc atggtatttg
      481 atgagactaa aagaatccaa tatgatcagg atacgaagat acaaagatta taatgtttat
      541 aatctatcaa tagataaaac ttttctactc gatactttac ataaatacaa caaaagtctc
      601 agttctgaca ttgtagaaga ttatgttgaa atgatggaag aattttgatt tttcacgaac
      661 cttatcatct agagttagtc aaagttttat ctatatctat ccttttctag tcgataggta
      721 ttttactttt aatagggatc aaaatttttt ccgttattga ctcaaggttt ttcagacgaa
      781 caccttaaat gtatacattt tctcaaaaaa aacgaaaaca aaaaaatggc tttccaaaat
      841 ggaagtagta gaaatattgt ttctcctaag ggagacaaaa aacagagacc actatattaa
      901 ttaacgatgc gatattatca aaacagaaat aaaaatgcag gtgaccagaa atggtcacct
      961 gaaacgaaac tactcgaaac cttgttaaag gtgttttagt tgatatacat gcataagtgt
     1021 taataacctt atggtacatt cgatgaatgt actttaatag attaatcttc tataatgaac
     1081 ttattttaat ttatcttggt aagaatgaaa atttaagaat catttctgaa ttgtctaatc
     1141 ctttctcagt tctatctttt gctaacttaa acagactatt gctatctaaa ataaaatgta
     1201 ttattagata tgaggaattt gaaaatctat ctattgacac agaactttta cttatttctc
     1261 caaaattaat atcatttatt tttatgatgg aactcttagc attaaaaaat tttttgaaat
     1321 gattgggtat ctttaattct gtatgaatat aaataaaacc ttcctcgatt cgtgtaagat
     1381 tatatttaaa aggaatttca aaagaaacct cgtttgtatt gttgttatat tcgtatttta
     1441 atatctgatc gttgtaagac agtatggtta aattatcatt tttattctgg ctaaaattat
     1501 taatgtttaa tatgttacct aagcttaagt atgaatcaaa ttttaaaaaa ttctgaccat
     1561 ttaaaccctt attgtccttc atattagttt tgattttaag atgatatatt ccgctttcta
     1621 atattggata gttaacataa actgttccat taatatctgc ctctatcttt gagttaatca
     1681 ttgagttgtt atattttccc atctttccac tttctttctt agcggagtta aattctaaaa
     1741 ccagtgaatc attccttaaa ttaaaagtat catttaaaaa taaatcttca gttatgttat
     1801 tatttctaaa attatttttt agtattatta cttccatact ttttgggttt tgagttgagt
     1861 tattttcagt atctattaat ttaaaaatca actgtctctt ttcctcgaca tgagaatcca
     1921 caatggaagg tttaaattca atccaaagac caagtggtgt attatctaaa tttaaaggag
     1981 gcaataaatc ccttccaaag ttatttttta taccatttgc atatgcattt tctatttgac
     2041 taatagataa aaagcctttt gaagatgtga gaaatgaaag taaaaataga caaattaata
     2101 tagtcacaaa ataaatatta atttctctca tttctcaaaa ctagtcgtct aaagagtcaa
     2161 aaattaaatt tcaagatacc atctacacaa aatattcaaa aaatatttta tctatctgaa
     2221 gagaaagcta cagatagaat cattgaagtg tttaagacat tctcttttca gttgttctaa
     2281 gtatcttcct tttccaaatt catcgaaatc ttttggtccg ccatcttcaa aaggttctaa
     2341 cttgaagttt tctggtagtt ctggttcgga caaaatttct aaagtagctg aaatattcaa
     2401 tggctttcct tctctaatga ctgcaatttt tacaatttct ccttctttct tggtttcgag
     2461 atacttgcta atgtcagtga cattgtttat ttttatatca tctattccaa gtatgatatc
     2521 tcctcctagc ctgatttgtg tattattaat aatttcaacc ttatatccgc ctcttatgcc
     2581 agccttgtct gctggactat tggagtttac gtctataacc aagaatcctt ttgcttcagt
     2641 taagttcatt gcatctgcaa tttctggtgt aacattaatt cctgttactc ctaacgaagg
     2701 atgttctcct accttagata gagtttctga atcaggtctt gcctgaagta tggcactttt
     2761 ctcttccaat gttccatttc tgattattgt cagggttatc ttgtctccaa cagatttttc
     2821 cagttctaag tgtgtcaata tgtcatctat ttttcttact ggatttccat caattgcaat
     2881 aattatatct cctcctaatt ctacttccct tccatcaatg ccataaattt tgtctccgcc
     2941 tcttattcct gccttgtctg caggactatt ggagtttaca tctataacca agaatccttt
     3001 tgcttcagtt aagttcattg cgtttgcaat ttctggtgta acattaattc ctgttactcc
     3061 taacgaagga tgttctccta ccttagatag agtttctgaa tcaggtcttg attgtagtat
     3121 ggcacttttc tcttccaatg ttccatttct gattattgtc a
//
LOCUS       DATIAS010000098         3176 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1382124, whole genome shotgun sequence.
ACCESSION   DATIAS010000098 DATIAS010000000
VERSION     DATIAS010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382124"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..499
                     /locus_tag="VLA74_01880"
     CDS             2..499
                     /locus_tag="VLA74_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methane monooxygenase/ammonia monooxygenase
                     subunit C"
                     /protein_id="HSF49484.1"
                     /translation="MVIMLGSIAASVEVDNFVDGSLHQTAIRDSAFTPAHWWLYSHFI
                     ALPLGWGFVAMYDRRVPILRGPNNSMNTGLKITIIGYLATMFTIGVNEMWHFWFVEEI
                     FAVPNHWMFNMGVVVAFMGALAYVVRVYARLVELGAESPARNPYVAEMYKLALEGKLY
                     SRSIP"
     gene            655..999
                     /locus_tag="VLA74_01885"
     CDS             655..999
                     /locus_tag="VLA74_01885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49485.1"
                     /translation="MNQCYICGSRFGNVTCAYCNQTVCSSCLIQSERKCKRCAISNKK
                     PSGFLKRNGPLILMIIAVWFFVSGLYPFPYFYAVGIPVDPVLMQPVLIATAILLIPFI
                     FMMFAWRKQPTY"
     gene            1067..2443
                     /locus_tag="VLA74_01890"
     CDS             1067..2443
                     /locus_tag="VLA74_01890"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HSF49486.1"
                     /translation="MPINTKIILYYDKGSIVISGINQIPYSVIDPRTNQLRALALHYQ
                     DIITYLQNSGIQYDDNVMELIPIQNLRIENINLSLRAYQKKAIENWIKAGKKGCIILP
                     TGSGKTIIAIKLIEIINSSTLIVVPTLDLMEQWTKFLSKYFQKIEIGNIGGGIFNITG
                     ITVSTYDSAYIRSSFIGNKFAFVIFDELHHLAAPGYRTIAEQFASPYRLGLTATYERE
                     DSLHLDFPRLVGGIVYQSSVNELARDKHLASFTVEKRYVKLLPEEEIEYQKNYDQYLS
                     FLHKLGLRYDHIALQKLIMISGKNQYARNALLARNKALDIALNSQSKIIELRKILSEN
                     PNRKTIIFTQHNKLVYLISNNFLIPFITHKSSKQEREDALNGFRDGRYRVLVTSKVLD
                     EGVDVPDAELGIIVSGTGSKREFIQRLGRLLRTKPNFTNAKLIEIISSGTSEINTSIR
                     RKQALKNL"
     gene            2683..>3176
                     /locus_tag="VLA74_01895"
     CDS             2683..>3176
                     /locus_tag="VLA74_01895"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSF49487.1"
                     /translation="MSDFSNKNESNSKMQRFVTHPLIKDNSIESRLYQNSIFNSSKDK
                     NSLIILPTSLGKTVISALICADVLYNYKQSRILIMAPTRPLVLQHLISFSSFLKVLDD
                     QKILLTGKVSPSMRKRIWDNKTIKLIFATPEVIRNDLNEFRLNLKDFGLVIFDEAHRA
                     IKDYA"
BASE COUNT         1181 a          421 c          479 g         1095 t
ORIGIN      
        1 aatggtaatt atgctaggtt ctattgctgc atcagtagaa gtcgacaact ttgtcgatgg
       61 atcattgcat caaacagcta tacgtgattc tgcatttaca ccagctcatt ggtggttata
      121 cagtcacttc attgcattac cgctaggatg gggatttgtt gcaatgtatg acagaagagt
      181 tccgattcta agaggtccaa acaactctat gaatactgga ttaaaaataa ccattattgg
      241 ttatctagcc acaatgttca caataggtgt taacgaaatg tggcactttt ggttcgtaga
      301 agaaatcttc gcagtaccta accactggat gtttaacatg ggtgtagttg tagctttcat
      361 gggtgctctt gcatatgtag taagagtcta tgcacgtcta gttgaacttg gagctgaatc
      421 accagcaagg aatccgtacg ttgcagaaat gtacaaatta gcattagaag gaaaattata
      481 cagcagatct atcccataaa aatagaaaaa gaattttcaa aaatttttca tttatttatt
      541 tttttaattc tatagaaaat agtcatttgt aaaactttta ttttttgtag attgatgata
      601 taaacagcta ataaatatta aatatgtctt ttacgatcat atttattatt attattgaat
      661 caatgttata tatgcggatc aagatttggg aatgtaactt gtgcatattg taatcagact
      721 gtatgttctt cttgtctgat tcaatcagaa agaaagtgta aaagatgtgc aatttcaaac
      781 aaaaaacctt caggatttct aaaaagaaat ggtcccctta ttcttatgat catagcagtc
      841 tggttttttg tttcagggtt atatccattt ccttattttt atgcagttgg aatcccggta
      901 gatcctgtac taatgcaacc tgttcttatt gctactgcta tacttttaat tccatttatt
      961 tttatgatgt ttgcatggag gaaacagcct acctattaat tattgtaaat aagatatcaa
     1021 atagaatgcg attcttttta agatgtataa ttgtttaaga tattaattgc ctataaatac
     1081 taaaataatc ctttactatg ataaaggatc tattgttatt tctggaataa atcaaattcc
     1141 atattcagta atagacccac gaacaaatca attacgagca ctagcattac attatcaaga
     1201 tattattaca tatttacaaa atagtggcat tcaatatgat gataatgtta tggaactaat
     1261 tcctatccaa aatttgagaa tcgaaaatat caatttatca ttgcgagcat atcaaaaaaa
     1321 ggcaatagaa aattggatta aggcaggaaa gaaaggatgt ataatattac caacaggttc
     1381 aggaaagact ataatagcta ttaaattaat cgaaataata aattcttcca cactaattgt
     1441 agttccaaca ttagatctta tggaacaatg gacaaaattt ttatctaaat attttcaaaa
     1501 aatagaaatt ggaaatattg gtggaggtat atttaatatc actggtatta ctgtatcgac
     1561 atatgattct gcttatattc gatcatcttt tataggaaac aaatttgctt ttgtaatatt
     1621 tgatgagtta catcatttag ctgccccagg ataccgaact attgcagaac aatttgcatc
     1681 tccctataga ttaggtttga cggctacata tgaacgcgaa gatagtctac atttagattt
     1741 tcctagatta gttggaggta tagtatatca atcatctgtt aatgagttag ccagagataa
     1801 acatcttgca tcttttacag tcgaaaaaag atacgtcaag ttattacccg aggaagaaat
     1861 agaatatcaa aaaaattatg atcaatattt gtctttttta cataaactag gacttagata
     1921 tgatcacatt gcacttcaaa aattaattat gatctctgga aaaaaccagt atgctcgaaa
     1981 tgcattattg gcaaggaata aagccttaga tattgcatta aatagtcaat ctaaaatcat
     2041 agaattgcgt aaaattctta gtgaaaatcc taataggaaa acaataatat ttacacaaca
     2101 caataaatta gtttatttaa tttctaataa ctttctaatt ccttttataa ctcataaatc
     2161 tagtaaacaa gaaagggaag atgcattaaa tggttttaga gacggtagat accgagtttt
     2221 agtaacttca aaagttttag atgaaggtgt agatgtccct gatgctgaat taggaataat
     2281 agtcagtgga actggaagca aaagagaatt tattcaaaga cttggacgtt tactaagaac
     2341 taaaccaaac tttacaaatg caaaacttat agaaattata tcatcaggaa ccagtgaaat
     2401 taatactagt atcagacgaa aacaggcttt aaaaaattta taattatact attaattttt
     2461 atagatagat ttttacatat aatcttatgt tacttagatt aactactaat agaatagaaa
     2521 tattgtttta tatttttagt aaatatataa taatattatt taataaattt tatattaatc
     2581 atcttgtata tattaattaa ttaagactag aagaaaaaaa tgaaacaaaa agaattaaat
     2641 taattatcat taattattaa ttctaataaa tacatttgcc atatgtcaga ctttagtaat
     2701 aaaaatgaaa gtaattctaa aatgcagaga tttgtaacac atcctctaat taaggataat
     2761 tctatagaat ctagattata tcagaatagt atttttaatt catcaaaaga taaaaactca
     2821 ttaattattt tacctacatc tttagggaaa actgttattt ctgcattgat ctgtgctgac
     2881 gttttgtata attataaaca gagtagaata ttgataatgg caccaactcg accattagta
     2941 ttacaacatt taatatcttt ttcttcattt cttaaagtat tagatgatca aaaaatattg
     3001 ttaacaggta aagtttctcc ctcaatgaga aaaaggatat gggataataa aacaataaag
     3061 ttaatttttg ctacacctga agtaataaga aatgatttga atgaatttcg attaaacttg
     3121 aaagattttg gattagtaat ttttgatgaa gctcatagag ctattaaaga ttatgc
//
LOCUS       DATIAS010000099        10633 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1382157, whole genome shotgun sequence.
ACCESSION   DATIAS010000099 DATIAS010000000
VERSION     DATIAS010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 10633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10633
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382157"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..682
                     /locus_tag="VLA74_01900"
     CDS             179..682
                     /locus_tag="VLA74_01900"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49488.1"
                     /translation="MLLGFEDETWLHLQPYITRTYMKRGEQQKILHKGSNDKVNVFIT
                     LLYPLNGIKFTTSKTRNSNDFINHLKSIKRYVRKRNVKRFIIVIDNASFHVSKKTKQF
                     IEKQSEDWLTVLFLPTHAPFLNPVETKVNRNLKKDVGANYNYGTEDNLLCNVRRYFRC
                     FGCWPKI"
     gene            complement(1804..5637)
                     /locus_tag="VLA74_01905"
     CDS             complement(1804..5637)
                     /locus_tag="VLA74_01905"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSF49489.1"
                     /translation="MPSQDHISISDNNYGQRNLTKITDFNLYKTGDRWAIIIGISKYN
                     NSELNLKYADRDAEELYKLLLTPSGGGFEQDHIKKLTNEQATKSEIGRVLGSFLKKPA
                     REDLLIIYFACHGSPDPDRPENVYLLTFDTDPLDIAGTALPMEDIELSIRRNLLAERI
                     VILADACHSAAIGGAIGRRMATNDAQVINTYLQGISKAKAGVALLTSAETSETAQEHE
                     KWNGGHGVFTYFLLEGMKGGADGYGRPKDGMVTVGELFDYVRENVKKATNNLQHPAIG
                     TNRFDRDLLLAVTGAVNAKENYQFGNYLCNIGYLLDDPAIFRDAAKQYREAIRLSKTA
                     RIPLPVAELGLGKALIAFGDYESANDILLELREQKEKETLPEAILYQGIALAKKKDFS
                     SAIRLFESFVETFPERNETIWVKEYLTWLNNKGIGKKHALLIGINNYMFKEVIFPLNG
                     CINDINEIKKVLINEYDFEEDKINSLTDQFATREKILSAFAKLIKDTLPGDTVIVHFS
                     GHSIPESSRRHEAVGVKPSTELYIIVYDTKKSSAGQLIDGISPLELHELINKIPAENK
                     TLILDTHPNNAFIDMAKKNGNYTLLLATDSAQISYELSFNSNGKSLYMGLFTGVLVQE
                     LYESKRNILTNGTLLDGSLRRIRNLGYNQTPLLIGDRDQLVFVPMEIYLTLFDFSKRR
                     NYSVFSIEGLIKSYSRFCTQIKIPLPEVHCSFGRAFLEKHDYHRAVESLSLAIKQRED
                     HYQEARFLLGKAQFFITRYDEALSNFRTYASYLSEEKTKDNKIKTIIENIEKIIVSKK
                     YAVLVGINEYISKDVKSLRGAVNDVLAFQEVLIKRFNFKNEDIILLLDGAATRSAVLN
                     AFKEIVTKAENGAALFYFSGIGSTNSEGKPTIVCSDSRLEQVYDIGLDELSTLSRESP
                     NLVTILDAEFARYSESGYMNNNNRSIAGYTRDIKNLPSLNIGPTVSSKKKGKTSDEKP
                     SVTSSDDKIVYRNIENDGLRIGGLSIYPQSISHKFYGENNESELEMKLPEEANKKFHG
                     KVTYSLISGLYSKGNGITNGEWFESSSSVLSSEPPFIVLGNSQEKVWSSPDHQNLGSQ
                     LNEIILENVILRDTITQQLTEIEHESIIETIWILRRLIEQKQQHGEQYPEGHLNLGIA
                     YSLIGKSEEAILELENAISLYSDYNIMELEKEKDSNTEDYYFECHFQLGKILFESKKN
                     LAKAISNLEEAKKATVVDSRLYYYLGKAYLALAEEEIKNKGMESLKLYLDNGAPLGYE
                     EDIRRLLGSKNDVKK"
     gene            complement(5653..7830)
                     /locus_tag="VLA74_01910"
     CDS             complement(5653..7830)
                     /locus_tag="VLA74_01910"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSF49490.1"
                     /translation="MAKSEIQNSGNNSLRAILIGIDFYFPNSLPDGGSYLSLGGCVND
                     ITRVENFLTGRLGMKSENIIKLTASSNPEGYENKPLESSEKWPTYENMVKAFKHVTES
                     ADSGDQVCIYYSGHGGRAKTNFPEIKGKDGIDEGLVPTDIGNPESSYLRDIEIAHLLK
                     KMVDKGLVVTTFLDSCHSGGSTRGPVKAAVRGLSTVDTTDRPKDSLVASNDELISTWS
                     QLFKTDRPATTRNIIRTSGWLPEARGYTLLAACRQHEYALEDQFPEVRSGVLTYYLLE
                     SLYSQRRNVLNYKMLYDTVIAKVHSRYSSQTPVLEGETDRMVFGSDYLKTESGANVIE
                     VMDSEQVKLNAGIAQGVGKDAQFIIYPSNSIDLKANERLAIVKVSSVSASNCTAEIIE
                     RFADNESIKEGDKALLANIGPIEKKREVVLVNQDKNSLSPMEQKKYFDNVKLAVSSAG
                     KGFVELVEMNEGEEENIPMIDYQIAINSKGEYEIWDQTGISIPNLNPPIRVTESNSAE
                     RVVSRLVHLARYNHVQQLNNYDDPLSSAVDKKLVVKLFQYQDNFKSKNDSELKPIESI
                     GNVTTLKIREEVVARIYNNSQQPLNITALDLQPDWGISQIIPEENKGDFETLEPGKYI
                     DFPFQTGLPEGYKEGKDIIKIFATVKPTQFRWLLLPSLDQPITRSAMLRGKGPTNSLE
                     ELFANLSEDTPSTKGLKPLDKTKSANVEWMTTQLEILINNRNS"
     gene            8370..8810
                     /locus_tag="VLA74_01915"
     CDS             8370..8810
                     /locus_tag="VLA74_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49491.1"
                     /translation="MGSKCNIYNLERNIDLESLAKSLTIDFRNMDYKVEFLRYSKESS
                     SGSNIGYTIKIQKNSKFRKIVGAREKFEITIEGNADNVTICVEAGEAGKNILSTAATT
                     LPAGVMTFGIGTMVAVGANIYSQKRFKNNIWDCINENIDKVNSR"
     gene            8827..9930
                     /locus_tag="VLA74_01920"
     CDS             8827..9930
                     /locus_tag="VLA74_01920"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSF49492.1"
                     /translation="MAIFIFCSKCKATRELRDLKKSQSSIKGKCKKCGAIIYKNISTE
                     TNMATESLEPSIEIASSYNNIKSPIGTFYNNLSTNAREIRNLEPIIEVDKIYNDFTSL
                     GNIYNNSYSVIIGISRYKEEVSLSNAYNDASKINNVLEKDYGFKNLVSPLFNENATKE
                     KIEEIFTDTIRNNKIIGTNDRLLIYYAGHGKLRRHSDYDGTEIKEGFIIPYDSKKNKY
                     FSNIPMETITKSCQNCNAKHVLLILDCCYSGFAATRSSINDDYHQIDKKYLNDIASRR
                     AIQVLAAGQDDQPVSDSGIRPGHSAFTGALLDILENQADLNKDGIISVREIAHYLETQ
                     VVKHTRGIVQRPVYNEIIGSRNGDFLFKIPRIY"
     gene            10402..>10633
                     /locus_tag="VLA74_01925"
     CDS             10402..>10633
                     /locus_tag="VLA74_01925"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49493.1"
                     /translation="MNKSKKYIRTIIRIPDDLWNEIKNILPDEKSEKTIGRPIVPYRK
                     VFDGIMFILRTGSQWKMLPKEYGSGSTCHRRFQ"
BASE COUNT         3504 a         1789 c         1651 g         3689 t
ORIGIN      
        1 gtattccgta aactgagacc aagaaaatac agataaagag aatacataac aataaaggtg
       61 agggttctgt ttctctcaaa tctaattttc atatcataaa tagaacgtgc ctagctatag
      121 cttttactgc ttaacttaac agagcccaag aaagtatcat ctgctctttt taaaaaagat
      181 tctactagga tttgaagatg aaacatggtt acatcttcaa ccatacataa ccaggacata
      241 catgaaaaga ggggaacagc aaaagatact ccataaagga tctaatgata aagtcaatgt
      301 attcataacc cttctctatc ccctaaatgg aatcaaattc acaacaagca aaacaagaaa
      361 tagtaatgat ttcataaacc atctaaaaag cattaaaaga tatgtcagaa aaagaaatgt
      421 caaacgattc atcattgtaa tagacaatgc atcatttcat gttagtaaaa agactaaaca
      481 gtttatagaa aaacaatcag aagactggct aactgtacta tttctaccaa cacatgcacc
      541 attcctgaat ccagtagaaa caaaagtaaa caggaatctg aaaaaagatg taggtgccaa
      601 ttacaattat ggaacagaag ataatctatt atgtaatgta agaagatatt ttagatgttt
      661 tggttgttgg cctaaaatat gatacttaac ttagtagtcc tttgcttagt aatttctgtc
      721 ataataatta cctatggttt acctatgggg gaaggattca aacctgctga attggttacg
      781 gtccaaacct tttgactagg agaacaggaa atcattcagg accaactagt atacaataaa
      841 aagaactggt caaattttat agaagggttc aaatcccaca gaaacctttc aatcttttac
      901 agatattata atatcattat tagatttcaa aattttaagt agattaattg atacataatt
      961 aaatgattac aaaaagtaaa ggttaattcc tagttcttat aattaatgct tcatgaattc
     1021 ttctaaaaag aggattggaa cccagagttc aatggggcca gtgggatttg aacccttcta
     1081 taaagtggga ccagctattg tatgatgctg atataagtaa tcatcaaaat cttcgattct
     1141 gtctttgaaa tactgatcaa ctctccatca gatttttctc taaagaatgt agatagtatt
     1201 tcgattcgaa ataaatgact tcatacttaa tagacctcta agtacattgt ccgcggtatc
     1261 tcttcttacc tttaattcca cattttctga gaaaataccg ttcctaactg aagtaaatat
     1321 tttaattcct tctttaataa tcatatctat tttttaatca ataatagata atagtaactt
     1381 caaagtcaaa tttagttcgc catcataaca tatgtttctc ttaatagtag gaatttaaca
     1441 gaactaagga taatgttgat gctctatcca gaacctccat aatataaagt ctagtgctta
     1501 tctgatacat ttcgttaatc tattaattct tttttgttac ttatatttgg caaaatattc
     1561 gaagtatagt tatttatata atcaattaat ttggaatcat caattattac attagagaaa
     1621 tttgttttat tgtctaatct taatccttcg taagatgtgg attaattata actgcatcag
     1681 aaagttttta tatacaccag aaaaatcagc atgagtaaaa ttacatgtgg atatatttaa
     1741 tgaatattat gactccatta gttttcaact ttcagaattt tgggtcttta acgtgaaaca
     1801 acatcatttt ttgacatcat tttttgaacc aagcaatctt cgtatatctt cttcatatcc
     1861 aaggggtgca ccattgtcta gatacagttt tagagattcc atacccttgt tttttatttc
     1921 ctcttctgcc aatgccaaat atgccttgcc taaataataa taaagtcggg aatcgactac
     1981 cgttgccttt tttgcttcct caagattgct tatggctttt gcaagatttt tcttactttc
     2041 aaacaatatt ttccctaatt gaaagtggca ttcaaaataa taatcctcag tatttgaatc
     2101 tttttccttc tctaattcca taatattata atcagaatat agtgatatcg cattctctaa
     2161 ttctaaaata gcctcttcac tttttccgat aagagaatat gcaattccaa gattcaaatg
     2221 tccttcaggg tactgttctc catgttgctg cttttgttcg ataagtctac gcaagatcca
     2281 gatagtttcg attattgatt catgttctat ttcagtcaac tgttgagtta ttgtatctct
     2341 tagaatgaca ttttctaata taatttcatt tagttgagaa cctagattct ggtggtcagg
     2401 acttgaccat actttttctt gactatttcc aagaacaata aagggaggtt ctgaagataa
     2461 aacagatgaa gatgactcaa accattctcc gtttgtaatg ccattgcctt ttgaataaag
     2521 accactaatt aatgaatatg taactttgcc gtgaaatttt ttatttgcct cttccggcaa
     2581 cttcatttct aattcagatt cattattttc cccatagaat ttatgggaaa tcgattgagg
     2641 atatatagac aacccaccta tccttaatcc atcattctcg atattgcggt agacaatctt
     2701 gtcatcagat gaagttacag aaggtttttc atctgacgtt tttccttttt ttttagacga
     2761 tactgtaggt cctatattta gtgaagggag atttttgata tctcttgtat agccagcaat
     2821 acttctattg ttattattca tatatcctga ttcggaatat ctagcgaatt ctgcatctaa
     2881 tatggtgaca agattaggag attctcttga tagagtagac aattcatcca gtcctatatc
     2941 atatacttgc tctagacgac tgtccgagca cacaatagtg ggtttgcctt cagagttagt
     3001 tgatccgata cctgaaaaat aaaacaaagc agctccattt tccgcctttg taacaatttc
     3061 tttgaaggcg tttaagactg ctgatcgtgt tgctgcacca tcaagcaaga ggataatgtc
     3121 ttcatttttg aaattgaatc tttttatcaa aacctcttga aatgccaaaa catcatttac
     3181 agcacctctt aatgatttta catctttact aatgtattca ttaataccta caagaactgc
     3241 atactttttg cttacaatta ttttctcaat attttcaatt atagttttaa tcttgttatc
     3301 ctttgtcttt tcttccgata aataagaagc atatgttcta aaattagata gggcctcatc
     3361 gtaacgcgta atgaaaaatt gtgcttttcc taacaggaat cttgcttctt gataatgatc
     3421 ctctctttgt tttattgcta aacttaaact ttcaacagca cgatggtagt catgtttttc
     3481 aagaaaggca cggccaaaac tacagtggac ttcaggtaac ggaattttaa tctgtgtaca
     3541 gaatcttgaa taactcttaa ttaatccttc tatactaaat actgaataat tcctgcgctt
     3601 tgaaaagtca aagagtgtaa gatatatctc cataggaaca aaaacgagct gatccctatc
     3661 tccaatcaaa agtggagtct ggttgtatcc gagatttctt atcctcctca aagatccatc
     3721 taaaagagta ccattagtca gtatatttct tttcgattcg taaagctcct gaacaagtac
     3781 tccagtaaat aatcccatgt aaagggattt cccattacta ttgaaagaaa gttcatacga
     3841 aatttgtgca gaatctgtag ccaataaaag cgtataattt ccattttttt tagccatgtc
     3901 aataaaagca ttattaggat gagtatcaag aatcaatgtt ttattttcag cagggatctt
     3961 attaatcagt tcatgtagtt ctagtggaga aatgccatcg atgagttgac ctgctgaact
     4021 tttttttgtg tcataaacta taatatataa ttctgtactt ggtttaactc caacggcttc
     4081 atgacgacga ctactttctg gtatgctgtg tccgctgaaa tgaactatta ctgtatcacc
     4141 tggaagagta tctttaatta attttgcaaa agcactcagt attttttcgc gagtagcgaa
     4201 ttgatcagtc aaactgttta ttttgtcttc ttcaaaatca tattcattta ttagcacttt
     4261 tttaatctca ttgatgtcat taatgcatcc attaagtgga aatattactt ccttgaacat
     4321 gtaattgttg ataccaatta aaagagcatg ttttttccca atacctttat tgtttaacca
     4381 tgttaagtac tcttttaccc aaatagtttc atttcgttct ggaaatgttt caacaaaaga
     4441 ttcaaaaagt ctaattgcag aactgaaatc cttttttttg gcaagtgcaa ttccttggta
     4501 taaaatagct tcaggcaaag tttctttttc tttctgttct cttaattcta aaagtatatc
     4561 gttagctgac tcataatctc caaatgctat caatgcttta cccaatccaa gttcagcaac
     4621 aggcaatggt attcttgcgg ttttagagag acgtattgct tctctatatt gtttcgcagc
     4681 atctcgaaat attgctggat catcaagtaa ataccctatg ttgcaaagat aatttccaaa
     4741 ctgataattc tctttagcat taacggcacc tgtcacagct aggagtaaat cacgatcaaa
     4801 tcgatttgtt ccaatagctg gatgttgcaa gttgttggtt gccttcttga cattctcacg
     4861 tacatagtca aataattctc cgacagttac catcccatcc tttggcctgc cataaccgtc
     4921 cgcgccacct ttcattcctt ccaaaagaaa gtatgtgaaa actccatgac cgccattcca
     4981 cttttcatgt tcttgtgctg tttcgctggt ttcagctgag gtcaacaatg caactccagc
     5041 tttggcctta cttatgccct gcagataagt attaatcact tgagcatcat ttgttgccat
     5101 tcgtcgacct atagctccac caatagctgc actatgacaa gcatcggcaa gaatcactat
     5161 tcgttctgca agtaaatttc gtcttataga aagctctatg tcctccatag gcaaagcagt
     5221 accagctata tctaaagggt ccgtgtcaaa agtcagcaag taaacgttct ctggcctatc
     5281 tgggtcagga gaaccatgac aagcaaaata gatgatcagt agatcttctc gtgcaggttt
     5341 ctttaagaaa ctcccaagaa ctcttcctat ttctgatttt gtagcttgtt cattggtaag
     5401 tttcttgata tgatcctgtt caaagcctcc tcctgatgga gtcaacaata gtttgtagag
     5461 ttcttctgca tctcggtctg catatttaag attgagttca gaattattgt attttgatat
     5521 ccctataatg atcgcccaac ggtctcctgt tttgtataga ttgaaatcag taattttagt
     5581 aagatttctt tgcccataat tattatcaga tatagaaata tgatcttgag aaggcatctt
     5641 gtactctcag tcttacgaat ttctattgtt tattagtatc tctaattgtg tagtcatcca
     5701 ttcaacatta gctgattttg ttttgtctaa tggtttcaat ccttttgttg atggtgtatc
     5761 ttcacttaga tttgcaaaaa gttcttctaa ggaatttgta ggtccttttc ctcgaagcat
     5821 tgctgatctt gtaattggtt ggtccagcga tggcaaaagt aaccatcgaa attgtgtagg
     5881 cttcactgtt gcaaagatct ttataatatc tttaccctcc ttatatcctt ctggaagtcc
     5941 tgtctgaaaa ggaaaatcta tatacttacc aggttccaat gtctcaaagt cacccttgtt
     6001 ctcctcagga ataatttgag atatgcccca atcaggttgt aggtcgagag cagttatatt
     6061 aagtggctgt tgggaattat tgtatatacg cgctaccacc tcctctctaa tctttaatgt
     6121 agtgacattt cctattgatt caataggttt cagctcagaa tcgtttttgc ttttaaaatt
     6181 atcttggtat tgaaatagct tgacaactaa ttttttatct actgctgaac ttagaggatc
     6241 atcataattg ttcaattgtt gaacatgatt gtatcttgcc aaatgaacca gccttgatac
     6301 cactcgttca gcagaattgc tctctgttac tcttattggt ggattcaaat taggtattga
     6361 aatacctgtc tggtcccaga tttcatattc cccttttgaa ttgattgcaa tttgatagtc
     6421 tatcataggg atattctcct cttctccttc attcatttca acgagttcta caaagccctt
     6481 gccagctgaa gaaacggcaa gctttacatt atcaaagtat tttttttgtt ccattggtga
     6541 taagctattc ttgtcttgat ttaccaaaac gacttcacgt tttttttcaa tcggccctat
     6601 attagcaagt aaagccttat caccttcctt tatagattca ttgtcagcaa atcgctctat
     6661 tatttcagcg gtacaattag atgcactaac actagatacc tttactattg ctagcctttc
     6721 attagccttt aaatcaatac tgttagaagg ataaattata aattgtgcat cttttccaac
     6781 tccttgcgca atacctgcat tcagcttgac ttgttccgaa tccataactt ctatcacgtt
     6841 ggctcccgat tcagtcttca agtaatcgct tccaaatacc attctatctg tttcaccttc
     6901 aagtactgga gtctgactcg aatatctact gtgaaccttt gctattactg tatcatatag
     6961 cattttataa ttgagtacat tacgtctctg gctatagaga gattctaaaa gataataagt
     7021 taaaactcca cttcgtactt ctggaaattg atcttctaaa gcatactcat gttgcctaca
     7081 agcagccaac aatgtatatc ctctagcttc tggaagccat ccactggttc ttatgatgtt
     7141 gcgtgtagta gcaggtctat cagttttgaa aagctgagac cacgtagata ttaattcatc
     7201 attagatgct actaagctgt ctttgggtct gtcggtggta tcaactgtgg aaaggccacg
     7261 aacagctgcc ttaacaggtc ctcttgttga accaccagag tgacaactgt ctaaaaaagt
     7321 agtaacaaca agtcctttgt caaccatctt tttcagcaaa tgggcaatct ctatatctct
     7381 aagataacta ctttcaggat ttccaatatc agtaggaact agaccttcat cgatgccatc
     7441 cttccccttt atctctggaa aattagtctt tgctctacca ccatggccag aatagtaaat
     7501 gcagacctga tcaccagaat ctgctgattc ggtgacatgt ttgaatgctt tcaccatgtt
     7561 ttcatatgta ggccattttt ctgaagattc aagaggcttg ttttcatatc cttcaggatt
     7621 ggaggatgct gtaagcttga taatattttc gcttttcata ccaagtcttc cagttagaaa
     7681 attttctact cgggtaatgt cgttgacaca tccacctaga cttagatagg agcccccatc
     7741 aggaagagaa tttggaaaat aaaaatcaat tcctatcaaa atagcgcgaa gtgaattatt
     7801 accagaattt tgtatttcag atttagccat aaaaatggca agttatgaat attattaaat
     7861 atattgtaga tatttatgag ttatttaaat ttctataaat attctgtaat tgtaataact
     7921 tgataaaatc tgatttttcc gattgtttta ttaattatct aagttgatgt tatttgataa
     7981 tttttcggcg cctcaaaatt tttaattggt ctgaaatcaa ttttactatt tcaaaatttg
     8041 agaattctca ttaatcgagt atagaaatat ttaacaacaa gtatattaca tcttgagaaa
     8101 ggttatctta tgttctaatt attaaataaa atagaataat tatgatatta tagacctatt
     8161 tctttgaagt taacataacc ttaatgataa caaaaaaatt tatttataat gaattagagt
     8221 aaattatatg tttaaattaa ataaagaaaa caattattta aatatacata atttaaactc
     8281 aataagatca agaaataatt tcaaatactg tacatttatg ttttattttt ttagctatat
     8341 aattattttt gaaagtatgg tgtgagtaaa tgggaagtaa atgtaacata tataatttag
     8401 agagaaatat tgatttggaa tctcttgcaa aatctttaac aatagatttt cgaaatatgg
     8461 attataaagt tgaatttttg agatattcca aggagtcttc ttcaggatcc aatattggat
     8521 atacaataaa aatacaaaag aatagtaaat tcagaaaaat agttggagct agagaaaaat
     8581 ttgagattac aatagaaggg aatgctgata atgtcactat ttgtgtagaa gcaggagaag
     8641 caggtaagaa cattttgtca actgctgcca caactcttcc tgctggtgtt atgacattcg
     8701 ggataggaac aatggttgcg gttggtgcta atatatattc gcaaaagaga tttaaaaata
     8761 atatatggga ttgtataaat gagaatattg acaaggttaa ttccagataa gtgattctaa
     8821 aaatcaatgg ccatcttcat attttgttct aaatgtaaag caacaagaga attaagggat
     8881 ttaaaaaaaa gtcaaagttc tattaaaggg aaatgtaaaa aatgtggagc gataatatat
     8941 aaaaatattt ctacagaaac taatatggca acagaatctc tagaaccaag tatagaaata
     9001 gcttctagtt ataataatat aaaatcaccg attggaacat tttacaataa tctttctacc
     9061 aatgctagag aaataagaaa tctagaacca attatagaag ttgacaagat ttataatgac
     9121 tttacatcat taggaaatat ttacaataat agctattctg ttattattgg aataagtagg
     9181 tataaagaag aagtatcgtt gtctaatgct tataacgatg cttctaaaat taacaacgta
     9241 cttgaaaaag attatggatt caagaattta gtttctccat tatttaatga aaatgctaca
     9301 aaagaaaaga ttgaagaaat atttactgat actatacgaa ataataaaat aataggtacg
     9361 aatgatagac tattaatata ttatgcaggt catggcaaat taaggaggca ttccgattat
     9421 gatggcacgg aaataaaaga gggatttata ataccttatg attcaaaaaa aaataaatat
     9481 ttttcaaata taccaatgga aactataaca aaaagctgcc aaaattgcaa tgcaaaacat
     9541 gttttattaa ttcttgattg ttgttatagt ggatttgctg caactagatc aagtattaat
     9601 gatgattatc atcaaataga taaaaaatat cttaatgaca ttgcatcaag gagagccatt
     9661 caagtattag ctgcaggaca agatgatcaa cctgtaagcg atagtggaat tagaccaggg
     9721 cattctgcct ttactggagc tctcttagac atattagaaa accaagcaga tctaaataaa
     9781 gatggaatta ttagtgtaag agaaatagca cattatttag aaactcaggt tgttaaacat
     9841 acaagaggta tagttcaaag accggtatat aatgagatta taggaagcag gaatggtgat
     9901 tttcttttta agattcctag gatatattaa attctataat acaattagta acttactaac
     9961 tttatataac atatcaattc cttataatta atcctaatta tagacatgat tgttattatt
    10021 atatcatata atttaaattt atatctgtaa tcatgttcca aattaaatta aatacattcc
    10081 ttgagatgaa tgagatcgtt attataatat ttgagaattt ttaaattttt tcggcgccta
    10141 aaaattttac cgatatcttt atctattaag ctatgctata tataattaca atatagaatt
    10201 aaattgatgg aaactccaat aactcatgta atatatgctg acgttatgga gttacctatt
    10261 tttatttaat aattaattaa aatagtaaat tttcaattca ctaatttaca aatgggttca
    10321 gtactattat tggttaagag cctatcccaa aaatagatag aaatatagct gcctgttttt
    10381 attctcttat atgtttaaca tttgaataaa agtaaaaagt atattagaac aattatacgt
    10441 attccagatg atctatggaa tgaaattaaa aatattttac cagatgagaa atcagagaag
    10501 acaataggtc gtcccattgt tccttacaga aaagtgtttg atggaataat gtttatcctt
    10561 agaactggat ctcagtggaa aatgttaccc aaagagtatg gttctggttc cacatgtcac
    10621 agaagatttc aag
//
LOCUS       DATIAS010000100        14719 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_700210, whole genome shotgun sequence.
ACCESSION   DATIAS010000100 DATIAS010000000
VERSION     DATIAS010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 14719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14719
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_700210"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VLA74_01930"
     CDS             <1..241
                     /locus_tag="VLA74_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49494.1"
                     /translation="TSFKLALEGKSGSIVEKFDSKESQITFLPYDLFQNKRILLLIQD
                     CDKEVNNSNLCIDNDNNKELHLINENVLTRLGSFF"
     gene            complement(585..896)
                     /locus_tag="VLA74_01935"
     CDS             complement(585..896)
                     /locus_tag="VLA74_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49495.1"
                     /translation="MALYIVRARPKNDLSGLRKELNSGEILRLRPFGKTLQYGLNNAK
                     IDPNDGYALWIEEDYCTPPLTMERESVLDRYFDDITVQLIASEKEGQDRIANIPGLWT
                     K"
     gene            complement(1028..2062)
                     /locus_tag="VLA74_01940"
     CDS             complement(1028..2062)
                     /locus_tag="VLA74_01940"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF49496.1"
                     /translation="MTIQEIDQVTVTILMDNYTDLLLTNSNHANRPRLTKNEKFILPL
                     PVAEHGFSALVNVVIDSENEKEKNSMNKNIKYKNNKIFLFDTGPSENGVIHNADIFGI
                     AFDQIDGIILSHGHFDHFTGLANILRRISLSRKDSSTRIDLFAHPEAFLKRWEVYQNG
                     ERAKMPFLDEEHLQELGALLHKNIGVMFLPSDDSPSLMLTGEIPRKTSFEKGFPIQYV
                     ENQSNNEIKLVPDPLVRDDQAIVFNVRNKGLVILTGCGHAGIINTIDYTKKITGIDKV
                     YAVLGGFHLPADKGIYEEAIEPTVKELLKIDPEYIVPCHCTGWKATNRIIETMPKKFL
                     QSSVGTVFSF"
     gene            complement(2093..2323)
                     /locus_tag="VLA74_01945"
     CDS             complement(2093..2323)
                     /locus_tag="VLA74_01945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49497.1"
                     /translation="MVLKQLSVHAINPVLRRNNNDHLQVKIGIDISEHSIIQYVVGEK
                     SYIDILGYGISMAAKMTKLATMNPITILLMNR"
     gene            2782..3108
                     /locus_tag="VLA74_01950"
     CDS             2782..3108
                     /locus_tag="VLA74_01950"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HSF49498.1"
                     /translation="MRNINSEYIKHNRVRLKEGSQKQITRIFTEFFEDIKGTVKGLKG
                     YAILENIENDRETIVLTFWETKEDMENYYSKDNKILSDLVDKVKPMFKQMPERSDYKI
                     ALFEID"
     gene            complement(3177..4367)
                     /locus_tag="VLA74_01955"
     CDS             complement(3177..4367)
                     /locus_tag="VLA74_01955"
                     /inference="COORDINATES: protein motif:HMM:NF018479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HSF49499.1"
                     /translation="MTTTTNNDEKERHATWLELFFDLVFVVIISQLSHFLLHEISLLR
                     FLEFLFLFIPVWWSWTGVTFYSTRFYSDDVGHRLLLLLQMGGAGAMAVNISEAFNNTF
                     SGFAISYAFMRFILIVEYIRVYKSSIIKTSISPKPLLKRYIIGFSVAALIWFISAFVT
                     TSDMRIELWIIGLIIDFSTPITARKLQAQYAPNVSHLPERMGLFTLIVLGESIVSIVI
                     GMTDQQWNIYSVIVSSLGLCISFSLWWLYFDSSGRLPIQILVEKSNVAIYFIWLYIHF
                     PLVVSITAVGVGIRHLIANEQYSALTGSDFWLISISVSIFLITQCILHLISVNNGNNK
                     AESLNRKKFVMFRIGSIIIILSLPFLFSDYGIPIVISSLITGICGFNIVYDMKYHSNH
                     KNKL"
     gene            complement(4411..5109)
                     /locus_tag="VLA74_01960"
     CDS             complement(4411..5109)
                     /locus_tag="VLA74_01960"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49500.1"
                     /translation="MIKSNDFGFNHVFVNYSSSSFSTSSSNNFNNNNKQENEDTSKNL
                     TFILLHGTGGNEEDLLFLGKELEPDAAILSPRGKVLENGMPRFFRRLSEGVFDIEDLK
                     FRTYELGDFIQKCSSYYKFDLNQTIVVGFSNGANIAASMLLLRPDVLQSVILFRAMVP
                     LIPNPLPDLSNKKILLSAGLNDPIVSRTETENLYRLFQKANANITLKWQSSSHNLIQD
                     DLIIAKEWISNNFH"
     gene            complement(5106..6101)
                     /locus_tag="VLA74_01965"
     CDS             complement(5106..6101)
                     /locus_tag="VLA74_01965"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF49501.1"
                     /translation="MINGIHHVTAICSNPQKNIDFYTKLLGLRLVKLTVNFDDPTTYH
                     LYYGDEIGHPGTILTFFPWSDAPKGYRGTGQAITTAFLIPPNSIDFWKDHLKNNDICF
                     EGPIKRFDGEEQIIKLYDPDGLELELVAHSSAMENDERFWKDGPISYENGIRGFYSVS
                     LSEEGYERTSAILNELGYKMTKNEGNRFRFQLEDSKSSTTGATKLDVLCLPYTPHGSI
                     GIGTVHHIAFRTLLDETQITIRKNIIKTGLNPTPVMDRTYFHSVYFREPGGVLFEIAT
                     DPPGFTVDQKVEELGKKLMLPNWLEPVRERLEKVLPKIYLPKDSKNNSIARNKQP"
     gene            complement(6126..7871)
                     /locus_tag="VLA74_01970"
     CDS             complement(6126..7871)
                     /locus_tag="VLA74_01970"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF49502.1"
                     /translation="MTDDTNTQKIANKEEKKISGFSPLNHPIYKTLWFATIGSNIGNA
                     MHDVGALWLMTNITDSPLMVALVQTSTALSMVLLSLFAGGLADVVDRRKLLLITQGYM
                     FVVAMTLGFLTIGELVTPTTLLLLTFMLGAGAAISIPSSIAITLEMVSKPEIPATITL
                     GGVSLNIGRAVGPAIFGFIIASLTNPGFVFILNALSFIVLIIALSRWHPSHEKTNMPP
                     EHIVGAMKAGVRYLIRAPAVQSIIIRAISFTIFGAALFALLPSLMRHELGFDSLEFGF
                     MLGSLGTGAIIGGTLILPYLRKKISIEWHFFGATILFAAVMILLASANDFIFLMGVMF
                     AGGIAWIIVMASLNVSMYKANPKWVGARSLATYTTIFQGGLAAGSVIWGSVAANFDVR
                     TALVIAAVGLGLGVSTGLKFKLISDVQSKSIKTSASMYWSSPTMLFEPSLEEGPVLVK
                     IEYKIGKESQQQNNKNILNDFLISLRDLSKIRKRDGAIQWGIYRDGTDPNIFVENFVV
                     ESWAEHLRQHERLTAADTEILDKVRSFHIGDTPPVVTHYVAEPFPITTKYSIAKDRDE
                     KETEDNNTNDNTNEK"
     gene            complement(7911..9830)
                     /locus_tag="VLA74_01975"
     CDS             complement(7911..9830)
                     /locus_tag="VLA74_01975"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSF49503.1"
                     /translation="MTKDADLIFINGHIATINNNLNFVSSVAIKDGIFIAVGNNDDSL
                     SYKGENTKILDLRNRTVIPGLNDSHIHIIRGGLNYNLEMRWDGIPTLNDALSRIEKQA
                     ERTPNPHWVRVVGGWSEFQFTEKRMPTIQEIEKYAKNIPAFILHLYHCAMINKAAIDV
                     VGYNKDTPNPPGAEFQRDTSSNPTGLITAKPAATILYQTLAKGPKLSYEEQVNSTRQF
                     MYELNRFGVTSAIDAGGGFQNYPDDYKVIDDLAEQDLLTVRIAYNLFTQKPKKELEDF
                     TNWIKIAKPGQGSDFYKLNGAGEMLVFSAADWENTLEPRPELAEQMESELKEVIKVLV
                     QNRWPFRMHATYNESITRFLNVFEEVNNEIPFDGLRWFFDHAETITEENIQRVKALGG
                     GIAIQDRLAFQGEYFIERYGKEVSENSPPLKKIIEIGVPLGAGTDATRVSTYNPWISL
                     YWLVSGKSVGGTILRSQNNCLDRMEALRLYTLGSAWFSNEEEKKGSIEVGKFADLVVL
                     TDDYFSIDEEKIKNIQSVLTIVGGKVVYATNEFQNLAPQPLSIKPSWSPVAAFGGYYN
                     IRQEKNDIEEGELAIPYNTQQLESNNKLNYKKDENIKSTLSLLSTHLDKNTNTYNISN
                     MRKGLCSCCDDFFSF"
     gene            complement(9899..10561)
                     /locus_tag="VLA74_01980"
     CDS             complement(9899..10561)
                     /locus_tag="VLA74_01980"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HSF49504.1"
                     /translation="MTSETLVNNKIHSLLTPDNCTLIMIDFQPQMAFAVKSIDGQTLI
                     NNAEGLAKSAKIFNVPTILTTVAEKSFSGPFFHQIKKVFPDQQMIDRTTMNCWEDQNI
                     VKEVERIGRKKLVLSGLWTEVCIVLPAIQALEAGYEIYVIADACGGTSTTAHDMAMAR
                     LIQAGAVPMTWLQFLLELQRDWARTETYDAVTKLVREDAGTYGLGVEYAKAMLGEHAR
                     EG"
     gene            10719..11069
                     /locus_tag="VLA74_01985"
     CDS             10719..11069
                     /locus_tag="VLA74_01985"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49505.1"
                     /translation="MSEIESKICKASGIGEVMGKKWSLSILKTLGTNPPLHFNELKKI
                     LSGISNKVLSERLQQLEREKIVVKTTITNDESTNILYSLTPLALEFHKTLQDIDNWID
                     KWKDYKNKEQEKGI"
     gene            complement(11259..11828)
                     /locus_tag="VLA74_01990"
                     /pseudo
     CDS             complement(11259..11828)
                     /locus_tag="VLA74_01990"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
     gene            complement(12324..14363)
                     /locus_tag="VLA74_01995"
     CDS             complement(12324..14363)
                     /locus_tag="VLA74_01995"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HSF49506.1"
                     /translation="MDTPLNLSLLSSFSEDFITINADIPVEYAVSVVSRTNPEYLIVN
                     RLKDQTHYRYVFSIKQFLHSVDNAIKNDNLKELKESLEKFLDLHEYKSDKVAEVTDED
                     MNNAQLLEPLSQYDKLVILEWKGQAVGVIDPGRSGKREISRPTESEWRGGDAILPGDP
                     DGEPIGSPPPAVQIQVIQRYSYVMFPAQMELEETAPLEVGIKVEQPPASTSATKKIEL
                     PVDLNEKEIPVMVILDLGTFEIDKNEKYYTKLLVPVEAKDSSLVIFHLTAKKEGWQTI
                     AIRFYYQQTGVGELKIHTMVVPQQQLKDSSTSSHGSQIKRSGGELNLLDVPPGTDITL
                     YIHEKRVTPDFEYDVLLTSKQDPLIVIGPINFPFNPEKKFRDIFERIEKDNSPNNVVD
                     QRIKKLGENLYEELFPAALKDLYWQKRDEKKLESIRIISKEPWIPWEIIKPWRQLSEG
                     NIEEDAFLCEQYSFARWLVNTPERIKNEQLKKVNVVVPSDTNLPNARKERDWIIDQFR
                     NIMGLDVSVDSKYEDVISTLEIGGFDLLHFSTHGIYKAENPLFSSIQLENQIDFTSAD
                     IAGKTRRFGYNNPLVILNACQTGAQGFSLTGIQSWATKFLNSGARVFIGTMWSVSDDI
                     AFKFAQEFYTELFKGTTLGEAVQIARNKSKRSGDPSWLAYQLYGHPNLQIKFGSK"
BASE COUNT         4885 a         2487 c         2153 g         5194 t
ORIGIN      
        1 tacctcattt aagctagcgt tggaaggtaa atcaggaagt attgtagaaa aatttgatag
       61 taaagaaagt caaatcactt ttcttccata tgatcttttt caaaataaaa gaattttact
      121 actcattcaa gattgtgata aagaggtaaa taattcaaat ctatgcatag ataatgacaa
      181 taacaaagaa cttcacctaa ttaacgaaaa tgttctaact agactaggta gcttttttta
      241 aagtaacctt taattcttaa atctttttat tactctatat taatactagt atagctatta
      301 gacttagtta aaatataatg acttatctaa aagttaaata ttatttttat tgtaatattt
      361 ttaaatttta gataatatca tgaatcttta tctcctcata ttaagaataa attttttttg
      421 gatgaacctt aattttgaaa ggcatttttg aactacaaaa ttgtgtcaaa atcagttcac
      481 acacctccga gcccatataa taccaaagat ctgtaaatct aaagttattt aacaataatt
      541 tacgaattaa ttactggctt tcttttttaa ttcatatgtt tcatctattt ggtccaaagc
      601 cctggaatat tggcaattct atcttgtcct tctttttctg aggcaataag ttgaactgta
      661 atatcatcaa aatatctatc aagaacactt tctctttcca tggttaatgg aggagtacaa
      721 taatcttctt ctatccataa agcatatcca tcgttaggat caatttttgc attatttaag
      781 ccatattgta gtgtttttcc aaatggtctt agtcttaata tttcaccaga attcaattct
      841 ttcctaagac ccgacagatc attttttggt cttgctctga ctatatataa tgccattatt
      901 gtttacttac atgttagtaa gaaaatatct tttataaata tctctaaaga tgaactataa
      961 aattgtgtca aagtatattg atgttataat tttaagactt ttaatctaca ataaataaaa
     1021 agcaatatta gaatgagaat actgtgccaa cactactttg taagaacttt ttaggcatgg
     1081 tttcaataat tctgtttgtt gctttccaac cggtacaatg acaaggtact atatactcag
     1141 ggtctatttt tagcagttct ttcactgtag gttctattgc ttcttcataa attcctttat
     1201 ctgctggaag atgaaaacct cccaagacag cataaacctt atcgattcca gtaattttct
     1261 tggtgtaatc tatcgtattt ataattcctg catgaccaca gccagttaaa atcactaatc
     1321 ccttatttct gacattaaat acgattgctt gatcatctct aaccaacgga tcgggaacaa
     1381 gctttatttc gttattagat tgattttcta catattgaat tggaaaccct ttctcaaaac
     1441 ttgttttcct tggtatctct cctgtaagca taagtgaagg agagtcatca ctgggaagaa
     1501 acataacacc tatgtttttg tgtagtagtg ctcctaattc ttgtagatgc tcttcatcca
     1561 agaacggcat ctttgccctt tccccgtttt gatagacttc ccatcgtttt agaaaagcct
     1621 caggatgggc aaagagatca attctagtac tactatcttt tctggataaa gatattcttc
     1681 ttagtatatt agcaagtcct gtaaaatgat caaaatgacc atgacttaag ataattccat
     1741 caatctgatc aaaagctatt ccaaatatgt ctgcgttatg aattacacca ttttcgcttg
     1801 gtcctgtatc aaagaggaat attttgttat ttttgtattt gatattttta ttcatactat
     1861 ttttctcctt ttcattttca ctgtctatga caacattgac aagagcagag aatccatgct
     1921 ctgcaactgg aagtggaagt atgaattttt cattcttcgt taaccgaggt ctatttgcat
     1981 gattagagtt tgttagcaat aggtctgtgt agttatccat aagaattgta acggtaactt
     2041 gatcaatttc ttgaatagtc attacctttc tatacctaca aactactatc ctttatctat
     2101 tcattaagag tatagtaatg gggttcatag ttgctagttt agtcattttt gctgccatac
     2161 ttataccgta tcctaaaata tcgatatagg atttttcacc tactacatat tgaataattg
     2221 agtgttcact aatatctatc cctatcttta cttgcaagtg gtcattatta tttcgtctta
     2281 agacaggatt tattgcatgc actgataact gctttaacac cataatgatc attaaaataa
     2341 attcttaaag tattagtttt actagttatt tctttcacct tatcaatcca tggtttcaat
     2401 tcatctttgt aataaccata attgtgtcta aattttgaat ttcttccatg acataggata
     2461 aatggaactt tcatataaca atgctgataa actccaaact actgcttcga ggttcgagtc
     2521 ccaactccgt tgtaaatcat tattatgatt tttagctata tcctttatct aaacacacta
     2581 acattaaata caagttaaca gatcccaatt acatgtcatg ctctaagccc tccaagcttt
     2641 ggtttttagt tatagagccc atttagtcgt tggaattaag tagacaagga tgctattaca
     2701 ttaagaaatt tattctacta gttgaaaaaa ttcttacaca aataaattaa catatataaa
     2761 aaaattatat tattaacaat attgagaaat atcaattcag aatatataaa acataacaga
     2821 gttagactga aggaaggctc acaaaaacag attactcgaa ttttcaccga attttttgaa
     2881 gatataaagg gaactgttaa aggattaaaa ggatatgcaa ttctggaaaa tatagaaaat
     2941 gatagagaaa ctattgttct aaccttttgg gaaactaaag aagatatgga aaattattat
     3001 tctaaagata acaagatttt atctgatcta gtagacaaag tcaaaccaat gtttaagcaa
     3061 atgccagaaa gatcagatta taaaatagca ctatttgaga ttgattaact tctatatcta
     3121 taagttacaa ataaaaataa gttgacatcc attatagttt tttcatagat gattaactat
     3181 aacttgtttt tatgattaga atgatatttc atatcataaa ctatgttaaa gccgcaaata
     3241 cccgtaatta aagaagatat tacaattggt atgccataat cactaaataa aaatggaaga
     3301 ctaaggatga ttattattga acctattcta aacataacaa acttttttct attaagagat
     3361 tcagccttat tattaccatt atttacagaa atcaaatgta atatacattg agtaattaaa
     3421 aaaatggaga ctgaaataga aattagccag aaatcagaac cagttaatgc agaatattgt
     3481 tcatttgcta ttagatgtct tattcctact cctactgcag ttattgaaac taccaatgga
     3541 aaatggatat acaaccagat aaaatatatc gcaacattac tcttttctac tagaatctgt
     3601 ataggtaatc ttccactact atcaaaatat aaccaccata aactaaaaga tatgcacaag
     3661 cctaacgatg agacaattac tgaatagata ttccattgtt ggtcagtcat tcctatcact
     3721 atactaacaa ttgattcacc tagtacaata agcgtgaata atcccattcg ttcaggtaaa
     3781 tgagatacat taggagcata ttgagcttgt aattttctag cagttattgg agtagaaaag
     3841 tcaattatta atccaataat ccataattca atacgcatat cagatgtggt tacaaatgca
     3901 gaaataaacc aaattaaggc tgcaacagaa aaaccaataa tatatctttt tagtaaaggt
     3961 ttaggtgata ttgaagtttt gataatactc gatttataga cacgaatata ttctactata
     4021 agaatgaaac gcataaacgc ataagatatt gcaaaaccag aaaaagtatt attaaaagct
     4081 tcagatatat tgactgccat agcaccagct cctcccattt gcaatagtag tagaagtcga
     4141 tgtcctacat catcagaata aaatctagtt gaataaaaag tgacacctgt ccaagaccac
     4201 caaactggaa taaaaagaaa taaaaattct aaaaatcgta gtaatgagat ctcatgtaat
     4261 aaaaaatgag acaattgaga tattataact acaaaaacaa gatcaaagaa aagctctagc
     4321 catgttgcat gacgttcttt ttcatcatta tttgtagttg ttgtcattat tatattgatt
     4381 agttaaatct aaactagtat attctatttt tcaatgaaag ttatttgaaa tccattcttt
     4441 tgcaattatc aagtcatctt gaataaggtt atgacttgag gattgccatt ttaacgttat
     4501 atttgcattg gctttttgaa ataacctata aagattttca gtttcagttc tagatactat
     4561 aggatcgttt aatcctgcag ataacaatat ttttttgttc gaaagatctg gtaaaggatt
     4621 aggaatcaag ggaaccattg ccctgaaaag tattacactc tgaagtacat ccggacggag
     4681 aagaagcata ctagcggcaa tattagctcc atttgaaaat cctactacta ttgtttggtt
     4741 taaatcaaat ttataatatg aagaacattt ttggataaag tctccaagtt cgtacgttct
     4801 gaatttaaga tcttcaatat caaacactcc ttctgatagt cttctaaaga aacgtggcat
     4861 accattttcc aagacttttc ctctaggact taatattgct gcatcaggtt caagttcctt
     4921 tccaaggaag agaagatctt cctcattccc gcctgtacca tgtaatagaa taaatgttaa
     4981 gttcttactc gtgtcctcat tttcctgttt gttgttattg ttgaaattat tagaagagga
     5041 ggtagagaag gaagaagaag aataattaac aaatacatga ttaaatccaa aatcatttga
     5101 tttaatcatg gctgtttgtt ccttgctatt gaattatttt tactatcttt tggtaaatag
     5161 atctttggta ataccttttc caatctttct cttactggtt caagccaatt cggtaacata
     5221 agttttttac ctaattcttc tactttttga tcaactgtaa atcctggtgg atctgtagca
     5281 atttcaaaca aaacgcctcc aggttctctg aaataaactg aatgaaaata ggttctatcc
     5341 attacaggcg ttggatttaa tcctgtcttt atgatattct ttctaattgt tatttgagtt
     5401 tcatctaaca atgttcgaaa agctatatga tgaactgttc ctatcccaat actgccatga
     5461 ggagtataag gtaaacaaag aacatctaat tttgtagccc cagtagtact agattttgaa
     5521 tcttctagtt gaaagcggaa tctattaccc tcattttttg tcattttgta tcctagttca
     5581 tttaaaattg ctgaagtacg ctcatatcct tcttctgata aacttacaga ataaaatcct
     5641 ctaataccgt tttcatatga tatcgggcca tctttccaaa atctttcatc attttccatt
     5701 gctgacgaat gggcaactag ttctagttca agaccatcag gatcatatag ttttattatt
     5761 tgttcttcgc catcaaaacg ttttattggt ccttcaaaac aaatatcatt attttttaaa
     5821 tgatctttcc aaaaatcaat agagtttggt ggtattaaaa aagctgttgt tatagcttga
     5881 cctgttcctc tataaccttt aggtgcatca gaccaaggaa agaaagtaag aatagttcca
     5941 ggatgtccta tttcatctcc ataatataga tgatatgttg taggatcatc aaaattaact
     6001 gttaatttga ccaatcttaa tcctaataat tttgtataaa aatcaatatt tttttgtgga
     6061 ttactgcaaa ttgcagtaac atgatgaatt ccgttaatca tagtattaac ctattattat
     6121 gattattatt tttcatttgt attatcattt gtattattat cttctgtttc cttttcatct
     6181 ctgtcttttg ctatactgta ttttgttgta atgggaaaag gttctgcaac ataatgagta
     6241 acaactggtg gtgtatctcc tatgtgaaag ctacgaactt tatcaagtat ctctgtatct
     6301 gcagctgtta gacgttcatg ttgtcttaaa tgttcagccc atgattctac tacaaaattc
     6361 tcaacaaaaa tatttggatc tgtaccatct ctatatattc cccattgaat tgctccatct
     6421 cgttttctaa tttttgataa atctcttaga gatatcaaaa agtcatttag gatatttttg
     6481 ttattctgtt gttggctctc tttacctatt ttatattcaa tctttaccag aactgggcct
     6541 tcttctaaac tcggttcaaa aagcatagtg ggagaagacc aatacataga tgcagatgtc
     6601 tttattgatt tagattgtac atcactaatc aacttgaact ttagacctgt tgataccccg
     6661 aggcccaaac ctacggcagc aattactaac gccgttctaa catcaaagtt tgcagctact
     6721 gaaccccata taacgcttcc agcagctagc cctccttgaa atattgtcgt gtatgtagca
     6781 agagaccttg caccaaccca ttttggattg gctttataca ttgagacatt caaactggcc
     6841 attacaataa tccatgcaat accacctgca aacataactc ccattaagaa aataaaatca
     6901 ttagcggatg caagtaaaat catgacagca gcaaataaaa tggtagcacc aaagaaatgc
     6961 cattcaattg agatcttttt tctgagataa ggtaaaatca atgtaccacc aattattgcg
     7021 ccagtaccta aactaccaag cataaaacca aattctagag aatcaaatcc taattcgtga
     7081 cgcatcaatg aaggtaaaag ggcgaataaa gcagctccaa aaatagtaaa cgatatggct
     7141 ctaatgataa tagattgtac tgctggtgca cgaataagat aacgtactcc tgctttcatt
     7201 gctcctacta tatgttctgg cggcatgttt gtcttctcat gagatggatg ccatctagac
     7261 aatgcaatga tcaagactat gaaagacaaa gcgtttaaaa taaaaacaaa tccaggattg
     7321 gtcaatgatg ctattataaa tccaaagata gctggtccca ctgcccgtcc aatatttaat
     7381 gaaacacctc caagtgtaat tgttgcaggt atttcgggtt ttgaaaccat ttctagagta
     7441 atggctattg atgatggaat acttattgca gctcccgcac ctaacataaa agtaagcaat
     7501 aacagagtag taggcgtaac aagttctcca atagtcaaaa atcccaaagt catggcaaca
     7561 acaaacatgt acccttgcgt tatcaaaagc agttttctgc gatctactac atctgctaaa
     7621 cctccagcaa aaagtgacaa taaaaccata gatagagcag ttgaagtttg tactagtgct
     7681 accataagag gtgagtcagt aatgttggtc attaaccaaa gtgcaccaac atcatgcatt
     7741 gcattaccaa tatttgatcc aattgtagca aaccatagag ttttatagat aggatggttt
     7801 aggggagaaa agccggatat ttttttttct tctttatttg ctattttttg ggtatttgta
     7861 tcgtcagtca ttgtggtatg ataatatcat tttttgacta aaaatatgtt ttaaaatgag
     7921 aaaaaatcgt cacagcatga acataaacct tttcgcatat tagatatatt gtatgtattt
     7981 gtatttttgt ctaaatgagt agataatagt gataatgttg atttaatatt ttcatctttt
     8041 ttatagttta atttattgtt tgattctaat tgttgagtat tatatggtat tgctaattct
     8101 ccttcttcga tgtcattttt ttcttgtcta atattataat atccaccaaa agctgccact
     8161 ggtgaccatg aaggcttaat acttaaaggt tgtggtgcta aattctgaaa ttcatttgtt
     8221 gcataaacta ctttcccacc aacaatcgtt aatactgatt gaatattctt tatcttttct
     8281 tcatctatcg aaaaataatc atctgtcaat actacaagat ctgcaaattt tccaacttca
     8341 atagaacctt ttttctcttc ttcatttgaa aaccatgcac taccgagcgt gtacaatcta
     8401 agggcttcca ttctatcaag acaattattt tgagatctta atattgtgcc accaactgat
     8461 ttccctgaaa ctagccaata aagcgaaatc caaggattat atgtagacac tctagtggca
     8521 tctgtaccag ctccaagagg aacaccaatt tcaattattt tctttaaagg tggagagttt
     8581 tctgatacct ctttcccata tctttcaata aaatattcac cttggaatgc aagtctatct
     8641 tgtattgcta taccaccacc taatgctttc actctttgaa tattttcttc agttatcgtt
     8701 tctgcatgat caaaaaacca tcttagacca tcaaagggaa tctcattatt tacttcttca
     8761 aagacattta aaaagcgagt aatagattca ttataggtag catgcattct aaaaggccag
     8821 cgattttgta ctaaaacttt aatgacttct tttaattcag attccatttg ttctgctagc
     8881 tctggccttg gttcaagtgt attctcccaa tctgctgctg aaaacacaag catttcacca
     8941 gctccgttta atttataaaa atcacttcct tgtcctggtt ttgctatttt gatccagttt
     9001 gtaaaatctt caagttcttt ttttggtttc tgagtaaaga gattataagc aatgcgaact
     9061 gtaaggagat cttgctctgc taaatcatca attaccttat aatcatctgg ataattttga
     9121 aaacctcctc ctgcatctat agcactagtg acaccaaaac gatttagctc atacatgaat
     9181 tgtctggtag aatttacttg ttcttcatag gacaatttgg gaccttttgc taatgtttga
     9241 taaagtatag ttgctgcagg ttttgcagtg attaaacctg ttggattact agaagtatca
     9301 cgctgaaact ctgctccagg aggatttggt gtatctttat tatatccaac aacatcaata
     9361 gcagctttgt taatcatagc acaatgataa aggtgtaaaa taaatgcagg aatattcttt
     9421 gcatatttct caatttcttg aatagtaggc attctttttt cagtaaattg aaactctgac
     9481 caacctccaa ctactctaac ccaatgagga tttggtgttc gttctgcttg tttttcaatt
     9541 cttgataaag catcattcaa tgttggtatt ccatcccatc gcatctctag attgtaattc
     9601 aatccaccac gtataatgtg aatatgggag tcgtttaaac ctggaattac tgtacgattt
     9661 ctcaaatcaa gtatttttgt attttcccct ttgtaagaaa ggctatcgtc attattacct
     9721 acagcaataa aaataccatc ttttatagct acagaagata caaaatttag attattatta
     9781 attgtagcta tatgaccatt tataaaaata agatctgcgt ctttagtcat atctatgtag
     9841 agccactaaa aaatgtagat ataattgtaa ttcatttttt tatatccatt attattattt
     9901 aaccttctct tgcatgctca cctagcatgg cttttgcata ttctactcca agtccatatg
     9961 tacctgcatc ttctcttact aattttgtta ctgcatcata ggtttctgtt ctagcccaat
    10021 cacgttgtaa ttctaatagg aattgtagcc aagtcatagg cactgctcct gcttggatga
    10081 gtctagccat tgccatgtca tgtgcagtag ttgatgtacc accacatgca tcagctataa
    10141 cataaatttc atatcctgct tcaagagctt gaatagctgg taatacaatg caaacttctg
    10201 tccatagacc agataaaaca agtttttttc tacctattct ctcaacttct ttaacaatat
    10261 tttgatcttc ccagcaattc atggttgttc tatctatcat ttgctgatct ggaaaaactt
    10321 ttttaatctg atgaaaaaag ggaccagaaa aactcttctc tgctacggta gttaaaatag
    10381 taggaacatt gaatatcttt gctgattttg ctagaccttc agcattatta attagagtct
    10441 gcccatctat ggattttact gcaaatgcca tttgaggttg aaaatctatc attattaagg
    10501 tacagttgtc aggagtcaac aagctgtgaa ttttattatt gactaaggtt tcacttgtca
    10561 ttaaataata ttatctgact caaataaaaa gatttggtaa ccatttggta acataatatt
    10621 tattctaatc atataatgat gaaattataa aagagaaaga atcatagtaa taaaagaaat
    10681 aaatgttaaa ttaataatag attgtattat tattatcaat gtctgaaata gaatcaaaga
    10741 tctgtaaagc tagtggaata ggcgaagtaa tgggtaaaaa atggtcttta tcaatattaa
    10801 aaactctcgg cacaaatcca cctcttcatt tcaatgaatt aaaaaaaata ctatcaggaa
    10861 taagtaataa ggtgttatcc gaacgattac aacagttaga acgagagaaa atagtagtaa
    10921 aaacaacaat aacaaatgat gaatctacca atatattata cagtttaact ccactagctt
    10981 tagaatttca taaaaccctg caagatatag ataattggat tgataaatgg aaagattaca
    11041 aaaataaaga acaagaaaag gggatttagt agatcaagat tggatatttg tctcaagctt
    11101 ttatattttg ttgactataa ctacaacata taaaacatta caattcatcc tgttaaaata
    11161 tctactttta gtatacagat tttgtaactg ctttttagaa ttatcttcct taaactttat
    11221 aattttagtt atgttattaa cattggccat ttattgcatt agctctttct atatttctct
    11281 actacttttc gtattctttc acgctcctct tggctaattt ttgttaattg ctgcaaagac
    11341 caatattttc catcatgata tatcaatgat tgtttttctg gattatgtat agcatccaat
    11401 gcttcaccaa taaacattat atgatctcca aaagtaattt cttgaaatag cttgcattcc
    11461 atattgagtg aagctcctat tatcattact gtcttaattt tactagcttc ataaaattga
    11521 aatcctaatt cctttaatgc agtgatctaa tcatatttgc taccactata tcctcccgct
    11581 acactagaaa gtatagattg atcgtttgca cataaattaa ctccaaattc ttttgatgtt
    11641 ctaatatttt ctaccgttgt ttttgtagga cctatagaga cggctaccaa tcctggatca
    11701 tatgagagat gatgagtcca ttcacaggcc ataatattat gtccgtgagg tccgttggat
    11761 gttattaatc ctatactagt tgcaaactta ttggaacgag gatcattcca ggtagtttca
    11821 taataaattt agaaagtata gtgataaaaa atttctgttt tttataaact gttagtcctt
    11881 atttcctttt aaaagttatt agaaattgtt tttagaaata ttagaataag ttaccaaatt
    11941 aataaatagc agattacaga tcccaattac atgtcatgct cgaagccctc cgagcccgta
    12001 ttacatcggt gttcatatac atgcttttga taatagtaaa agagaaaaga gagacgtcta
    12061 aatgtcacaa aaacaaatca atattaagaa attatatttt atagaaagtt ataatatttt
    12121 gatataggaa attaattagt attgaatttt ataattttta gaagtggatt tactaataat
    12181 aattagcaaa taaaaataat aataaatatt tactaatata atttagtagt gtagtattac
    12241 taaatgtact ttagtatttt acaaatatat aaaaagtttt gaggagttat aagatatact
    12301 tgttgtcaat aaaatacaca aaactattta gatccaaact taatctgtaa atttggatgt
    12361 ccgtagagct gataagcaag ccatgaaggg tcgccacttc gtttagattt attacgcgct
    12421 atttgtacgg cttctcctaa tgttgtgccc ttaaatagct ctgtataaaa ttcctgtgcg
    12481 aatttgaagg caatatcatc acttactgac cacattgtac cgatgaaaac tcttgcaccg
    12541 gaatttagaa actttgtagc ccagctttgt attccagtaa gagaaaatcc ttgagcacct
    12601 gtctggcagg catttaagat aactaatgga ttattataac caaatcttcg agtctttcca
    12661 gcaatatcag ctgatgtgaa atcgatttgg ttttcaagtt gaatagatga aaagagagga
    12721 ttttcagcct tatatatccc atgagtactg aaatgcaaca gatcaaagcc tccaatttct
    12781 aatgtagaaa taacatcttc atatttagaa tcaacagaga catctaatcc cattatattc
    12841 ctaaattgat ctataatcca atctcgttcc ttacgtgcat taggtaagtt agtatcagaa
    12901 ggtacaacta catttacttt ttttaattgt tcattcttta ttctctcagg tgtatttacc
    12961 agccaccgag cgaaagagta ttgttcacac aaaaatgcat cctcttcaat attaccttcg
    13021 cttaattgac gccaaggttt aatgatctcc caaggtatcc atggctcttt cgaaattata
    13081 cgaatacttt ctaatttttt ttcatcacgc ttttgccaat atagatcttt aagagcagca
    13141 gggaaaagct cttcatacaa gttttcacct aacttcttta tcctttgatc gactacatta
    13201 tttggagaat tatctttttc aattctttca aaaatatcac ggaatttttt ttcaggatta
    13261 aatggaaaat taattggtcc tatcacaatc agtggatctt gttttgaagt taacaataca
    13321 tcatattcaa aatcaggagt aactcttttc tcatgtatgt aaagtgtaat atctgttcct
    13381 ggaggtacat caagaaggtt taattctcct cctgatcttt ttatttgact gccatgagaa
    13441 gatgtactac tatcttttaa ttgttgttgt ggtacaacca ttgtatgtat ttttaattct
    13501 ccaacaccag tttgttgata gtagaatcta attgcaatgg tttgccatcc ttctttttta
    13561 gctgtaagat gaaatataac taatgaagaa tccttggctt caactggtac tagcaattta
    13621 gtataatact tctcattttt atcgatttca aaagtaccta aatctagaat taccattaca
    13681 ggaatttcct tttcatttaa atcaacaggt aattctattt tttttgttgc ggaagtagag
    13741 gcaggtggtt gctctacttt tatcccaact tccaatggag cagtttcttc caattccatt
    13801 tgtgctggga acattacgta tgaatatctt tgtatgacct gaatttgaac agctggtggg
    13861 ggagatccta taggttcacc gtctgggtcg ccaggtaaga ttgcatcgcc accgcgccat
    13921 tctgattctg taggtcgtga aatttctctt ttcccagatc gtccaggatc aataacacct
    13981 acagcttgcc ctttccattc taatattact aatttatcat attgtgataa aggttctaac
    14041 aactgagcat tattcatatc ttcatccgta acttctgcta ccttatcaga tttatattca
    14101 tgtagatcca aaaatttttc taatgattcc tttaattcct taagattatc attcttaata
    14161 gcattatcaa cagaatgaag aaattgttta atagagaaga catagcgata atgagtttga
    14221 tctttaagac gattaacaat taaatactcg ggatttgttc ttgaaaccac agaaacagca
    14281 tattcaactg gaatgtctgc gttgatagta ataaaatcct ctgaaaaaga agacaatagt
    14341 gatagattga gtggcgtatc catatttagt gtatcccttg gtatcttctg caaaagatta
    14401 gaccaaatgc aattactaga tattggtcaa ataatgaaag cacataacta ttaagattgt
    14461 cgtaaagttg tttatatttc actggtattt ctttgatgaa taccatagaa aatatcatca
    14521 aatttttaat agaattacaa gtatatacaa ttatgggttt ttaatgctat tcttagtata
    14581 attatttaaa tttatccaaa ttattatgct ttttttcatt aatatccaaa tttaattaac
    14641 aattagccgt tgaatatata attactttta tagttattat tgccatttat aataataaaa
    14701 ggtatgatca gaaaggaaa
//
LOCUS       DATIAS010000101         3673 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1382501, whole genome shotgun sequence.
ACCESSION   DATIAS010000101 DATIAS010000000
VERSION     DATIAS010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382501"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..647
                     /locus_tag="VLA74_02000"
     CDS             <1..647
                     /locus_tag="VLA74_02000"
                     /inference="COORDINATES: protein motif:HMM:NF015971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49507.1"
                     /translation="VKFRPTVSSALAVTKDFLEFSKMGIISNPLENNKDIVFFPEKFA
                     VKDYSSKIKENVYLSLRRPSHFIGPEYGTNKPSIWLYKGSSLTEMNEHKVIIKPEQDW
                     ENLKIGAGPAPIKTKKGWLLIYHGVNQEKVYRAGAVILDLNDPSKVLYRSSRPILEPF
                     EPYELFGDVNNVVFPTGTAIIDNNLFLYYGGADKVCCVATVDLDTLLDYITGSN"
     gene            complement(739..1086)
                     /locus_tag="VLA74_02005"
     CDS             complement(739..1086)
                     /locus_tag="VLA74_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49508.1"
                     /translation="MLDNNKKIDFVGIIGKNAKLITGRSNNTVKDLTFDCKIGQELPS
                     MLEIFELIKNCDFEKVWHEGELAYSTIESCKLILVILPLTNDRQEFICFLLTNDQNKD
                     NVEPMIEEVLFGL"
     gene            complement(1576..2796)
                     /locus_tag="VLA74_02010"
     CDS             complement(1576..2796)
                     /locus_tag="VLA74_02010"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF49509.1"
                     /translation="MTEKRNLKLLMVSTEYPPMKGGVGRYTYNLVNAMKGIGIDTHVV
                     SGEEGNGDYKGLSPYNKNNSDLLLKIVNESQPDIVHIQMEHGLYGLNFRSLFPGKMTT
                     SLDSFYSKCPKPIVTTFHSAYDFKEWVNLDPNFQGTGYLGKIKWIIRKSRNYWIRSIN
                     YEPFNNLNEEILNHSKAGIVFSHYLCNFIPGCKVIYHGSEPAFPEKITKQFARKKLHL
                     PDNGRIALALGFFTFTKGWDIINKIDIPKNWTIILNHSRNYFSSQEYNLNFNQSRHKD
                     RIMNLNKDYLSEEEMSLLLYASDIVFLPYRVSSGSGVMFDGFGHDLPFLASSLGFFKE
                     FEDIHLGMTIEGKPEEFTKGLEVIDKNYDMYLPNVIKFKEKLRWCDIATQHENIYKGC
                     FETRKNIKNEILIN"
     gene            complement(3049..3480)
                     /locus_tag="VLA74_02015"
     CDS             complement(3049..3480)
                     /locus_tag="VLA74_02015"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HSF49510.1"
                     /translation="MRVKVNDNEYDIEIVGEKVLVNNINFDLKRYRDKITLGNDTFYL
                     DFVEDTEPSLMIINGVSYVVSKDFSNYGLEKEIRAPINGKITDLLVNINDRIEKDQTI
                     LVLEAMKMENQIKSHLKGVIEKIYVCKDQLVKKGDILVKFE"
     gene            complement(3481..>3673)
                     /locus_tag="VLA74_02020"
     CDS             complement(3481..>3673)
                     /locus_tag="VLA74_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49511.1"
                     /translation="DISFINKMKHYSPRNGEIAAAIFSMLPRKIQFIKTQQYQDAWIQ
                     RKLDLNETSYLNDNWRWST"
BASE COUNT         1194 a          605 c          495 g         1379 t
ORIGIN      
        1 acgtaaaatt tcgaccaaca gtttcttcag ctttggcagt tactaaagat ttcttggaat
       61 tttcaaaaat gggtataatt agcaatccac tggaaaacaa taaagatata gtatttttcc
      121 cagagaaatt tgcggtaaaa gattatagtt ctaaaataaa agaaaatgta tatctctctt
      181 taaggagacc cagtcatttt atcggacccg aatatggtac taataaacca agtatttggt
      241 tatataaagg atcatctttg acggaaatga acgaacataa ggtaattata aagccagaac
      301 aggattggga aaatctaaaa attggtgcag gcccagcacc tataaagaca aaaaaaggat
      361 ggctactgat atatcatggc gtaaatcagg aaaaggtgta tagggcaggt gcagtaatat
      421 tggatttaaa tgatccgtca aaagtactat atagatctag caggcctatt ctagaaccat
      481 ttgaaccgta tgagctattt ggtgacgtta ataatgtcgt attcccaaca ggaacagcaa
      541 ttattgataa caatttattt ttgtattatg gaggtgcaga taaagtgtgt tgtgtagcta
      601 cagtagattt ggacacctta ttggactata taacaggttc aaactagacg aaaaaatatc
      661 ttatatcttt tttaaaatag ttatttactt gttttttgtt ctattcaaaa caatcaatgg
      721 ataataaata atactatgtt ataatccaaa taaaacttct tcaatcatag gttcaacatt
      781 gtctttattt tgatcattag ttaacaaaaa acaaatgaat tcttgtctat cgttagtaag
      841 tggcaaaata actaatatta atttacacga ctcgatagtt gaatatgcta attctccttc
      901 atgccatacc ttttcaaaat cacaattttt gattaactca aatatttcaa gcatcgaagg
      961 caattcttgg cctatcttgc aatcaaaggt caaatcttta accgtattgt tacttctacc
     1021 agtaattagc ttagcatttt ttcctattat cccaacaaaa tctatttttt tattgttgtc
     1081 gagcattcgg aagcaaattt gtttcatgaa attcctttca atcattttaa attcatttaa
     1141 tttctttcaa gattataacc tggtataatc caagtatgat ttccagatcg tttaaagcaa
     1201 tgtggatctg tgcaaagtgg atccctaact gagctccaac ataggatcat gttttctgtc
     1261 ttccacaatt gtctgatagt acagactaca cagtaactta aaagaatttt gtttattgtg
     1321 cattacactg aaaatgaaga tttagttgaa ttcataaaaa tttttaacaa taaagactct
     1381 tcctaaattg tatagtattt tttaaaatta tatgatttcg ttctcttata ttcttttttt
     1441 tatttggatg gtttttgaga acacaaagaa cactgactga aacaattact ttaaaaagtt
     1501 aataattaat tctttcaatt ttacgcgtta cttcagatta ttggcctatt cagtatctca
     1561 gataataatg attccttaat ttattagtat ttcatttttg atattttttc ttgtctcaaa
     1621 acagccttta taaatatttt catgttgtgt tgcaatatcg caccatctta atttttcttt
     1681 aaactttata acattcggta gatacatatc gtagtttttg tcaatgactt ctagtccctt
     1741 tgtaaattct tccggttttc cttctattgt catacctaaa tgtatgtctt caaattcttt
     1801 aaagaaacct agactagaag cgaggaatgg caagtcatgt ccaaatccat caaacattac
     1861 tcctgaacca gaactaactc tatatggcaa aaatacaatg tctgaagcgt aaagtaataa
     1921 tgacatctct tcctctgata gataatcctt attcaaattc attattctgt ctttgtgtct
     1981 actttgattg aaatttaagt tgtattcctg gctactaaaa taatttcttg aatgatttaa
     2041 aattattgtc caatttttag gaatatctat tttattaata atatcccatc ccttagtgaa
     2101 ggtaaaaaaa cctaaagcaa gtgctattct gccattatct ggcaaatgca atttttttct
     2161 agcaaactgt tttgttatct tttcagggaa cgctggttca gagccatgat aaataacttt
     2221 acatcctggt atgaaattgc ataaatagtg ggaaaataca atccctgcct tactatgatt
     2281 caaaatttcc tcgttcagat tgttaaatgg ctcatagttt attgatctga tccaataatt
     2341 tcttgatttt cttattatcc attttatttt tccaagatag cctgttcctt gaaaattggg
     2401 atctaaattt acccattcct taaaatcata tgcagagtga aaagttgtta ctattggttt
     2461 gggacatttt gaataaaaag agtctaacga tgtagtcatt ttacctggaa aaagggatct
     2521 aaaattcagt ccatataatc catgttccat ttgaatatgt actatatctg gctgtgattc
     2581 atttacaatt tttaataata aatctgaatt atttttgtta tatggcgaca accctttgta
     2641 atctccatta ccttcttcac ccgagacaac gtgcgtatcg atacctatcc ctttcattgc
     2701 atttactaaa ttgtatgtat accttccaac accccctttc attggtgggt attctgtcga
     2761 caccatcaat aactttaagt tgcgtttttc agtcatattc tttgcaccca gatttcagat
     2821 aataaatata attattatta aaaaacataa ttttaataca caaacagtgt ttataaactt
     2881 ataaaaaatt ccttgcaaat cacatgatta tttttagagt aataaaaatg acaattgaaa
     2941 ttgattaaat tttttatttg atgtcactct tgcatacact cgttcaggaa acagatattt
     3001 ctatagttat ctgtctatct cttaaatatt tagccttaaa atgacgtgtc attcaaattt
     3061 cacaaggata tctccttttt ttactaattg gtccttgcat acatatattt tctcaattac
     3121 tcctttcaaa tgcgatttta tttgattctc cattttcata gcctcaagaa ccaaaatggt
     3181 ttgatccttt tctatacgat cgttaatatt aactagtaga tctgtgattt ttccatttat
     3241 tggagctcgt atttcttttt ccaacccgta atttgaaaaa tcttttgata caacataact
     3301 tactccatta attatcatta acgaaggttc agtatcttct acaaagtcca aataaaatgt
     3361 atcattgcct aatgtaattt tatctctgta tctttttaaa tcaaaattaa tattattaac
     3421 taaaaccttt tcaccgacta tttcgatatc atattcatta tcgttaactt ttaccctcaa
     3481 ttacgttgac catctccagt tatcatttaa ataactcgtc tcattcaaat ccaattttcg
     3541 ttgtatccaa gcatcttggt attgttgagt ttttatgaat tgaatttttc taggtagcat
     3601 tgaaaatatt gctgcagcta tttcaccgtt tcttggtgaa tagtgtttca ttttgttgat
     3661 gaatgatata tca
//
LOCUS       DATIAS010000102         2678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_973644, whole genome shotgun sequence.
ACCESSION   DATIAS010000102 DATIAS010000000
VERSION     DATIAS010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973644"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..1028
                     /gene="trxB"
                     /locus_tag="VLA74_02025"
     CDS             60..1028
                     /gene="trxB"
                     /locus_tag="VLA74_02025"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HSF49512.1"
                     /translation="MSIHNKLIIIGSGPAGLTASIYAARGGIEPLVISGNEPGGQLMY
                     TSEVENFPGFDEPILGPILMEKMRKQAQRFGTRFVDKAISSVDFSSKPFRIRCSNSDN
                     NNNNIEEYFADSVIIATGASAVWLGLESEQRLRGGGVSSCATCDGFFFKGKDVVVVGG
                     GDTAMEEALFLIKFTKSVMVIHRRNKLNASAIMQQKAFRNEKISFLWNTIIEDILGNS
                     KVESVRVKNVITGESKDIRTDGVFVAIGHKPNTELFKGQIELDERGYIKKYEESKTSI
                     DGVFVAGDVYDYKYRQAITAAGSGCKAALDVINYLESKPKNEESLE"
     gene            1353..1619
                     /locus_tag="VLA74_02030"
     CDS             1353..1619
                     /locus_tag="VLA74_02030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49513.1"
                     /translation="MGKKKKETIRIIKREDANKEDYTFVSNDNILNNVNNIKNNNEST
                     TYTKLENKSDDEIIEKKKIYSKKVDNKGRKILGKSIQGHSPVYE"
     gene            complement(1624..1767)
                     /locus_tag="VLA74_02035"
     CDS             complement(1624..1767)
                     /locus_tag="VLA74_02035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49514.1"
                     /translation="MEQSQVSFGNGSNINKVKKSKLYEPEKSIYLRELNSHGFSVQSI
                     MNL"
     gene            complement(1867..2592)
                     /locus_tag="VLA74_02040"
     CDS             complement(1867..2592)
                     /locus_tag="VLA74_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49515.1"
                     /translation="MTHDLLIRGFDNQINSQLGELAKEKGVSINSIVKDAVDKWLKQQ
                     QSDIPKKHYLLIYSDDDSVLGLLKSMDRLAKENDLFKCYCGPPSTASTKLLSKLKWYD
                     GTIMPYYYDTKNIKQKQNQNQQIQIQNQKGIMNYCNKVMGNIVEAANNTNNKQVCCLD
                     FLINDIAKDSLQQALTIEKAYDNSRIPGLMYCTYKTETLLSAEIKDLVELFEGHDQVF
                     ILKQDDVYKLHITKENVHKLFLN"
BASE COUNT          962 a          348 c          417 g          951 t
ORIGIN      
        1 atattttaaa tatttaaaaa ttagaatcaa aaatcaagaa gaggactaat aatataacaa
       61 tgagcattca taataaactt ataataattg gttctgggcc tgcaggatta accgcttcta
      121 tatatgctgc aaggggagga atagaacctt tagttatatc tggcaatgaa ccaggtggtc
      181 aattaatgta tacttccgaa gttgagaatt ttccaggttt tgatgaacct atattaggac
      241 ctattttaat ggaaaaaatg agaaaacagg cccagcgatt tgggacaagg tttgtagaca
      301 aagcaatttc atctgttgat ttttcatcaa aaccatttcg cataagatgt tccaactcgg
      361 ataacaataa taacaatatt gaagaatatt ttgcagattc tgtcattatt gctacaggag
      421 cgtcagctgt atggctggga ttagaatccg agcaaagatt aagaggagga ggagtttcgt
      481 cgtgtgctac atgtgatggc ttcttcttca aaggaaaaga tgttgtagta gttggtggtg
      541 gagatacagc tatggaagaa gcattattct tgataaaatt tacaaagagt gttatggtta
      601 ttcatagacg aaataaatta aatgcatcag caataatgca acagaaagca tttagaaatg
      661 agaaaatatc ttttctttgg aatactataa ttgaggatat actaggtaat agcaaggtag
      721 aatctgtacg agttaaaaat gtaattacag gagaatcaaa agatattaga actgatggag
      781 tatttgtagc aattgggcat aaacccaata cagaattgtt taaaggacaa atagaacttg
      841 atgaaagagg ttatataaaa aagtatgaag aaagtaaaac tagcattgat ggagttttcg
      901 ttgcaggaga tgtttatgac tacaaatata gacaagctat tactgctgct ggctccggct
      961 gtaaagctgc gttggatgtc ataaactatc ttgaatcaaa accaaaaaat gaggaatcac
     1021 tagaataaat gttattctaa atgttgctca ttataaaaag ctatattaga attaccttta
     1081 tcttttttta taattgcata tctagataga taaaaattct ttttctcttt tcacttttta
     1141 ataatcttaa ataaccttta tattctatat gttcaaacta agactattgc attttatcaa
     1201 tccctgatat aacgcacttt tctattatat aatatcacat ttattgttaa ttcaaaatta
     1261 aattcactca acatccattg atttattatt catttatttt tgatataaca ttgattgata
     1321 atttgcaaaa ataaaaaagg ttggtttaaa aaatgggtaa gaaaaaaaag gaaactatta
     1381 gaataataaa aagagaagat gctaacaaag aagattatac ttttgttagc aatgataata
     1441 ttctaaataa tgtaaataat ataaaaaata ataatgaatc tacaacttat acaaagttag
     1501 aaaataaatc agatgatgag ataattgaaa aaaagaagat ttattcaaaa aaagtggaca
     1561 ataaaggtag aaagatttta ggtaaaagta tacaaggtca ttcaccagta tatgaataac
     1621 taattataga ttcattattg attgaacact gaaaccatga ctattcaact cccgaaggta
     1681 aatgcttttc tcgggttcat agagttttga cttttttact ttattgatat tacttccatt
     1741 cccaaaggat acttgacttt gttccattag accaatactt tagagtgatt taacctttag
     1801 aagacacaaa taaatttgaa aaaattatta tggcatatag taattaattt ctttaataat
     1861 gtataactaa tttaagaaaa gtttatgcac attttccttt gtgatatgaa gtttatatac
     1921 atcatcttgt tttagtataa agacctggtc atgtccttca aacaattcta caaggtcttt
     1981 tatttctgca cttagcaaag tttcagtctt gtatgtacaa tacattagtc caggaattct
     2041 gctattatca taagcttttt caattgttaa ggcttgttgt aatgaatctt ttgctatatc
     2101 atttataaga aaatcaagac agcaaacttg tttattattg gtattgtttg ctgcttctac
     2161 tatatttccc ataactttgt tacaataatt cataatacct ttttgatttt gaatttgaat
     2221 ctgttgattt tgattttgtt tttgtttaat atttttagta tcgtaataat agggcattat
     2281 agtcccatca taccatttga gttttgataa tagtttggta gatgcagtag aaggaggacc
     2341 acaataacat ttaaataaat cattctcttt tgcaagccta tccatagact ttagtaaccc
     2401 caatacggaa tcatcatcag aataaattaa aagatagtgt ttttttggaa tatctgattg
     2461 ctgttgttta agccatttgt caaccgcgtc ttttacaatt gaatttatcg atactccttt
     2521 ttcttttgct aattctccta attgtgaatt gatttgatta tcaaatcctc ttattagtaa
     2581 atcatgtgtc attttctatt ttaatactgt aatatatctt caatgatata tatgtttagc
     2641 aattttgata tcgtgatatc cttttcctaa catttata
//
LOCUS       DATIAS010000103         3466 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1382729, whole genome shotgun sequence.
ACCESSION   DATIAS010000103 DATIAS010000000
VERSION     DATIAS010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3466
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382729"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VLA74_02045"
     CDS             <1..334
                     /locus_tag="VLA74_02045"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSF49516.1"
                     /translation="TISYNNRGEFIDAQGDIIVGIDGNPVRKIDDILTHLEKEKKVGD
                     TAILTLIRDKKFINVELQLGERPTHSDISRSSGTDLFGDSQSKSSNGGMYSECLKIMP
                     KSLCDLLR"
     gene            969..1640
                     /locus_tag="VLA74_02050"
     CDS             969..1640
                     /locus_tag="VLA74_02050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49517.1"
                     /translation="MVKGNSHFYDSTENKISNSYIDSDSITSLSSASLKLESNLGIKS
                     TGRCGICVKDVNLESFNDMKKYVENFLGIATDEKKNENLSFSFNSFLDEYNYLWFILN
                     GQKIEDVVAGINAVGDTIHEKGFSRQLLAAVFEFTSGYENRNEEARNVVEAIEHNNKT
                     SQYLIYNYKRDNFYPFVPTGTTSQTGKRKRDNRMEVKIMKEISNEIPFEEDLSQWYPI
                     WNIPF"
     gene            complement(1804..2136)
                     /locus_tag="VLA74_02055"
     CDS             complement(1804..2136)
                     /locus_tag="VLA74_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49518.1"
                     /translation="MSYESQVQIVRITGKGQFRVSSEIVHKVNTLDNEIVDLVKKNSS
                     SNGEYHIDNQKKIHEKIEEMNDLVTSKGEKLKNSEIISSDIIIPNQDLALKDLKKIFK
                     EEGLIPDS"
     gene            complement(2157..2870)
                     /locus_tag="VLA74_02060"
     CDS             complement(2157..2870)
                     /locus_tag="VLA74_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HSF49519.1"
                     /translation="MGLLERFTSIFKAKAHNIAEKFEDPEELLNYSFEKQQELINKLR
                     QYITQVVTSKKRLEMQRAKLSANIATLEDQARRSLKSNREDLAKMALERKNIITIQIN
                     NLDKQIEGIQRDQEKLEDAERRLTTKIDEFKTRKEMIKAQYSAAEAQVKIKENLSGIS
                     EEMGDIGMILNRVEEKTDRMKAKAEALDEMMESGVLTDYTQTYEPNDTDIEKELKKVS
                     LDSAVEEELAKLKAETNNP"
     gene            3219..>3466
                     /locus_tag="VLA74_02065"
     CDS             3219..>3466
                     /locus_tag="VLA74_02065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49520.1"
                     /translation="MIFKFVILGILMILIFHAPTIFAVPYGSYQSENFKITNMSALYK
                     GKYIEDNYEILGIIENIGNETSSEIHLIATIFDKNNNL"
BASE COUNT         1170 a          520 c          526 g         1250 t
ORIGIN      
        1 tacaatatct tacaacaaca gaggcgagtt tatagatgca caaggggaca taattgttgg
       61 aatagatgga aatcctgtta gaaaaataga tgatatactt actcatttag aaaaagagaa
      121 aaaagtgggc gatacagcta ttttaacttt aattcgcgac aagaaattta taaacgtaga
      181 attacagctg ggagaaagac ctactcactc tgatatttct agatcttctg ggacagattt
      241 gtttggtgat tcacaatcca aatcttcaaa cggtggtatg tattcagaat gtttaaagat
      301 tatgccaaag agtttgtgcg atctacttcg atgatttaga ctattcagta atacaaatta
      361 aagttatacg actcactata tttcaatttt agacaaattt tctatcaacc tagtcaaata
      421 acacaataag gttcaattaa taaataaaat tcgtagatcc tcatgaatat tttcatcaaa
      481 gtaaaacata aagattgata ttatatttca atgatatgtt atggattcgc aaccatttta
      541 tccgaatact cactatctgt agtctttggt cagatctaat tagtattatt taattgatag
      601 atttaacata aattaaaatc acataaagac gaaagtgaaa agttttattt tttactttta
      661 tctaaagagt attttctgtc tatctccggt ttccgtagaa ttaaaaaaga aaatcaccta
      721 gtatctcaat ttcacgtccc attttggaga attgatcaaa atatggagat tgataagaat
      781 gctattcaag ctgaacattt tggaatattc tggatacaat atttcatgaa aaagataaag
      841 gtaactatta tgaagattct ttttgtgttg ccagaaatct agttaataga aagataagtt
      901 cacataggac aaacgataaa ccaaaagtaa tgaatttttt ccataatgta agagtatttt
      961 tcacgaaatt ggtaaaaggt aattcacatt tttatgattc taccgaaaat aaaatcagca
     1021 attcatacat agatagtgac tctatcacat ccttatcttc tgcatctcta aaattagaga
     1081 gtaatctcgg aataaaaagt acaggaaggt gtggaatatg tgtaaaagat gtaaatttag
     1141 aatcgtttaa tgatatgaag aaatatgttg aaaattttct ggggatagct accgatgaaa
     1201 aaaaaaatga aaatctatcc ttttccttta attcctttct tgatgaatat aattatcttt
     1261 ggtttatatt aaacggacaa aaaattgaag atgtagtggc tggaattaat gcggtcggag
     1321 atactattca cgaaaaggga ttctctcgac aattgcttgc tgctgttttt gagttcacga
     1381 gtgggtatga aaatcgtaac gaagaggcac ggaatgttgt tgaagctata gaacataata
     1441 ataaaaccag tcaatacctt atctataatt ataagcgtga caatttctat ccttttgttc
     1501 cgaccggtac tacatctcag actggaaaaa gaaaaagaga taaccggatg gaagtaaaaa
     1561 taatgaagga gatttcaaat gaaataccat ttgaggagga tctttctcaa tggtatccga
     1621 tatggaatat accattttaa atagaagtat atgtagtaga attttaatta tgtaaatcta
     1681 gacaataaaa tatgaatcac aaattcttac tcagataaaa ttacaaattg aaacgttcag
     1741 aaaccaaatt aataaaaaaa atagatttaa taaaaataaa aaaaatttcc ttattgattg
     1801 ttcttaacta tctggaatca agccttcttc cttaaagatt ttttttaggt ctttcaaagc
     1861 gagatcctgg ttaggtataa taatatctga tgagatgatc tcagaattct taagtttttc
     1921 accttttgaa gtaactagat cattcatttc ttcaatcttt tcatgtatct tcttttggtt
     1981 atcgatatga tattcaccgt tggagctact gttttttttg accaggtcta ctatctcatt
     2041 atctaatgta ttgactttgt gaactatttc actacttact ctaaattgac ctttcccggt
     2101 tattctgact atctgaactt ggctttcata agacattagt atcactactc tgaaatctat
     2161 ggattatttg tttcagcctt caatttcgct agttcctctt caactgcgct atctagtgat
     2221 actttcttga gttccttttc tatatctgtg tcattaggct cgtaggtttg tgtataatct
     2281 gtaagtaccc ctgactccat catttcgtca agagcttctg ctttagcctt catcctatcc
     2341 gtcttttctt caaccctgtt gagaatcatc ccgatgtctc ccatctcttc agagattcca
     2401 gaaagatttt cttttatctt gacctgtgct tctgcggcag aatattgtgc ttttatcatc
     2461 tcttttctgg ttttaaattc atcaattttc gtcgtaagac gtcgttcagc atcctctagc
     2521 ttttcttggt ctctctgtat tccctctatc tgtttatcca ggttgtttat ctgaattgtg
     2581 ataatattct ttctctccag tgccattttt gccaggtcct ctctgttaga tttcagtgag
     2641 cgacgagcct gatcttccaa agtggcgatg ttagccgaaa gttttgctct ttgcatctca
     2701 agtcgtttct ttgaagttac aacttgagta atatattgtc ttaatttgtt tatcagctct
     2761 tgttgcttct caaaagaata atttaaaagt tcttcaggat cttcaaattt ttcagcaata
     2821 ttatgagctt ttgccttaaa aattgatgta aatctttcta ataaacccat cttattaaat
     2881 aaaatacgag aagattatat taatgtttat tggttcatat attagacaag aattgtttta
     2941 ggtttttgat gatatcttag tatctaacaa cttaatacat aatatttgag atttgatatc
     3001 attttcaatt tttttccagt ttatctttta atttggtaag ataagtatac tataattttg
     3061 tattgcaaaa gatatgctat aaaatatgta tttaaatcaa taataatatt tttaacaact
     3121 acttgaatac aatcgtatat aaaattatca taaatcaagt tttaaaatcg tgtaagcatg
     3181 ataaagagat aaatatcgtt atctttttta gaaaaatatt gatattcaag tttgttattc
     3241 taggaatact tatgatattg atttttcatg cccctactat ttttgctgta ccatatggaa
     3301 gctatcaaag cgagaatttt aaaataacaa atatgagtgc attatacaag ggtaaataca
     3361 tagaagacaa ttatgaaatt cttgggataa ttgaaaatat aggaaatgaa acttccagtg
     3421 aaatccatct aatagcaact atctttgaca aaaacaataa tttgat
//
LOCUS       DATIAS010000104         3825 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1382735, whole genome shotgun sequence.
ACCESSION   DATIAS010000104 DATIAS010000000
VERSION     DATIAS010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3825
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382735"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VLA74_02070"
     CDS             <1..303
                     /locus_tag="VLA74_02070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49521.1"
                     /translation="SNYGKHTVYTDGGTWYPEACNVLRLKHYLHSPFQKSLMERVNQY
                     FKDRIESFDDYYPCMQKEECNLLHVYNWLQFFVSMYNDTITNNNDFELWEVNITLT"
     gene            485..838
                     /locus_tag="VLA74_02075"
     CDS             485..838
                     /locus_tag="VLA74_02075"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49522.1"
                     /translation="MKYDWDATTYDRISDAQESWGHEIIEYRKWKGNEIVLDAGCGSG
                     RLTKILSIKVPQGKVIAVDSDLSMIRLAKENLAKFSNIEFIKMDISQLELAEKVDVVF
                     SNAVLHWILNHKKSF"
     gene            complement(1740..3050)
                     /locus_tag="VLA74_02080"
     CDS             complement(1740..3050)
                     /locus_tag="VLA74_02080"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF49523.1"
                     /translation="MFDLSLQQLTKQQKVIVLGSWLGWALDGYDLVLMLFVISSINQL
                     FFPSNDPSLSLLATFATYVVTLIMRPFGGAFFGNFGDKHGRKKAMIITITGFSLVTFL
                     TGLLPTWQSVGILAPILLLIIRFAQGFFAGGEWGSGAVISMESSPKPMRGLLSGFVQS
                     GFTFGFLLASISFQFTQFAFPDDKFIEIGWRVLFFTGIIPGLVALFVRLKMDESQIWI
                     KKVKEKKIARIPLKNVLSNKDNRKRFFLSLIVMTGLMFSYYISIGFMPTLLEKYVKLE
                     RQEVASIMIITIIFSLIGHLFTGFISQYIGRLKILTIFGIASLIVAIPALNGIFTASN
                     NFEIALYSSLLVFFVSTGFGPMPAFLAERFPTEIRNSAAGFVYNGGLLVGSWAPLIAI
                     TLLSYFDKHDITQYYAVAINIIIASIILIIGSKVNPDTRNVDLG"
     gene            complement(3383..3523)
                     /locus_tag="VLA74_02085"
     CDS             complement(3383..3523)
                     /locus_tag="VLA74_02085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49524.1"
                     /translation="MGSYNFPAKCVGFEPFYKVGPVTFKLIYTLTNSDYRTLKSAPAR
                     RE"
BASE COUNT         1445 a          570 c          519 g         1291 t
ORIGIN      
        1 tcaaattatg gtaaacatac agtgtacact gatggcggaa catggtatcc agaagcatgt
       61 aatgtcttga gattgaaaca ctatctacat tcaccatttc agaaaagttt gatggaaaga
      121 gtcaaccagt atttcaaaga tagaattgag tcttttgatg actattatcc atgtatgcaa
      181 aaagaggaat gtaatctatt acatgtatat aattggttac aattcttcgt atccatgtat
      241 aatgatacaa taacaaataa taatgatttt gagttatggg aggtgaatat taccttaact
      301 taacagagcc cacttcccca tctatttttc aatttcttta ttttccaatc tttaggatta
      361 acttcaacaa ctttactaaa ttcattatta tttttttaat aatcattaga ttatatttag
      421 aaattattca ataacaacat cttctaaaat aactttatat aaataataag gccaatatct
      481 attagtgaaa tatgactggg atgctacaac gtatgatcgt atctcagatg cacaagaatc
      541 atggggacat gagataatag aatatagaaa atggaaagga aatgaaatag ttcttgatgc
      601 tggttgtggt tctggaagat taaccaagat attatcaatt aaagttccac aaggaaaagt
      661 tattgcagta gattctgatt tgtctatgat aagacttgct aaagaaaacc tagcaaaatt
      721 ttctaatatt gaatttatca aaatggatat ttctcaatta gaacttgcag aaaaagtaga
      781 tgttgtattt tcaaatgccg tattacattg gattttaaat cataaaaaaa gtttttgaac
      841 tcttctggca aattctaaac cccgaaggtc aactattaat tcaatgtggt ggacatagaa
      901 atcttacaaa gactctatcc atactcaata aagttcaaaa atcaaaggaa ttttataatt
      961 atttttgcaa caataaagga gatgatattt ggaatcaaat atggtatttt gccaaaaaag
     1021 aagatacaga aaaaatatta caagaaatag gctttagaaa taaagtcttt ctggaaaata
     1081 aagaagctaa attccataac aaagaagaat actttctttt cataaaaaca attgttctaa
     1141 taccatatct aaaatattta cccaatgaga cactaaaaga taagttttcc aaatcggtaa
     1201 tacaggaaat tgaaactaat gcaaaagaat tacaatggaa attagatttc gttaggctaa
     1261 acattaatgc aataaaataa atgtacatta aagtttgaat atataactca ttgaagaatc
     1321 taaaattaat acatcttttg atcacaattg caattaggat aatgcgtctg taaattttac
     1381 ctatcatagc attgtctaaa ttaataaatt caattgtgta gtagatggca tatggattgc
     1441 gaaaaataat tttatcatat gataaagata atgttattgt atacaataga taatctttgc
     1501 aattaataat ctaaaacata cacattttta agtgagacta aaatttaggt caaatttgtt
     1561 tcgaattttc actggtataa agacaaaaat gttgcaaatt ttatttatcc tatttttcta
     1621 tgtatgaatt ttcatagctt tagattctcc ttcttttatt aaagctttaa ctgtactaac
     1681 tacaaaatct gaattttgaa gaggatgagg agttaaaaaa caaactcatt ttttattaat
     1741 catcctagat ctacattcct ggtatctgga ttaactttag aacctattat aaggataata
     1801 gaggctatta taatatttat agcaacagca taatattgag taatatcatg cttatcaaaa
     1861 taagacaata aagtaatagc tattaatggc gcccatgaac ctactaatag tccgccatta
     1921 taaacgaaac ctgctgcact atttctaatc tcagtaggaa atctttcagc taaaaatgca
     1981 ggcatcggtc caaatccagt agatacaaag aaaactaata aggaagagta aagagcaatc
     2041 tcaaaattat ttgatgcagt aaagatacca ttcaatgcag gtatggcaac tattaaggat
     2101 gcgataccaa atattgttaa tatttttaac ctaccaatat attgactaat aaaacctgta
     2161 aataaatgac ctattaagga aaatattata gtaataatca tgatacttgc tacttcctgt
     2221 ctttctaatt ttacatactt ttctaataaa gtaggcataa aacctataga gatataataa
     2281 gaaaacataa gaccagtcat gactatcaaa gataaaaaaa agcgttttct attatcttta
     2341 ttagataaaa catttttcaa tggaattcta gcaatcttct tttcttttac tttcttgatc
     2401 catatctgtg attcatccat ttttaacctt acaaacaatg ctacaagtcc tggtattata
     2461 cctgtaaaga ataatactct ccaacctatc tcaataaatt tatcatcagg aaaagcaaat
     2521 tgagtgaatt gaaatgaaat tgatgcaaga aggaaaccaa atgtaaatcc actttgtaca
     2581 aatcctgaaa gaagtccacg cataggtttt ggtgaagatt ccatactgat tacggctcca
     2641 ctaccccatt caccaccagc gaaaaagccc tgtgcgaatc taattattag caataaaatt
     2701 ggtgccaaaa ttcctacaga ttgccaggtt ggcaataaac cagtcaagaa agttactaaa
     2761 gaaaaacctg tgattgttat tatcatagcc ttctttcttc catgtttatc accaaagttt
     2821 ccaaagaatg ctccaccaaa aggtctcatt attagtgtta ctacatatgt tgcaaaggta
     2881 gctaatagac tcaaggatgg atcgttagaa ggaaaaaata attgatttat tgatgaaatt
     2941 acaaaaagca ttaaaacaag atcatatcca tcgagtgccc atccaagcca tgatcctaga
     3001 acgataacct tttgttgctt tgttagttgt tgaagagata agtcaaacac taaaaatatt
     3061 aaaaaatata tgtagtttaa aaatattctt atcaaaatgg ttatgttgaa tctataggcg
     3121 ttttaattga gaaataggcc agttataatg agaactcaaa ttcctcattc atattattgt
     3181 tttgatattc tatatttttt agtttattct tttaatatat tttaattcag ttactatttt
     3241 ctatatatga ttagaatcaa atatcataat ttctcgagaa aatcataaac agaaatagat
     3301 gatatattca aaagtaaatc ttaattattc cccctttgct tactataaca ttagattctt
     3361 atttttggca cctttatcgg tattactccc gacgggccgg tgctgatttt agcgttctat
     3421 aatcagaatt tgtaagagta taaatcaatt tgaaagtaac tggtcccact ttatagaagg
     3481 gttcaaatcc cacacattta gctgggaaat tatatgaacc cacttttatt attaaatata
     3541 tataatactg attgcaaatc ctctttttag gtcaaattta gttcatatcc cacaatagta
     3601 caaaaaaatt gtaataaact tttttgttat tattatatat aacttctatt tctatacaaa
     3661 atgattagtt tctttattac aaaaaattaa tcaatgatta aggatttatt acacccctac
     3721 caagaatttt accatccttt aacatcctca atgcttttgt ggcctcatca agtctgaatc
     3781 tattagaaat aactggtttt attattcccc tttttgctaa tgaaa
//
LOCUS       DATIAS010000105         2073 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1382774, whole genome shotgun sequence.
ACCESSION   DATIAS010000105 DATIAS010000000
VERSION     DATIAS010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382774"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..641)
                     /locus_tag="VLA74_02090"
     CDS             complement(<1..641)
                     /locus_tag="VLA74_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF49525.1"
                     /translation="MAIGTESSTIFIHVIISLALLLFTAKIFAELFHRIKLPVVLGEL
                     LAGIVIGPYALGGLPLFNGEPLVILDETIKHIGELAAIVILFVAGLEITPREFLRGGA
                     SSFTVGALGVIVPFFVGYVIFSLYGLEALETLLIATALTATSIAISIQVLTSLGKMQT
                     REARLILGAAIVDDILAIAVLSVVLTMVQTGNTTPDIMEITFLILKILGLFVA"
     gene            complement(751..1152)
                     /locus_tag="VLA74_02095"
     CDS             complement(751..1152)
                     /locus_tag="VLA74_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49526.1"
                     /translation="MGSDTNYDKIKHLVEVEDDIFAVFTINSKGEAIDLTVAKNVDVE
                     KSIIENIFTNFNKILDDKIGNLPHSSSEILGKLKWKVTEYEKIRILQIIEKDKIVVVL
                     IKSNTSLDETIDNILGYYYEEEEDDIPKSLF"
     gene            1363..1938
                     /locus_tag="VLA74_02100"
     CDS             1363..1938
                     /locus_tag="VLA74_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49527.1"
                     /translation="MKFHYISSNKVLMMMMLIMMNMILTTSNTDLSYSQSNGDSLIFE
                     DPLSGVQFKYTDEWVRQGSFLYGAESECSSLPCLRLPEISISTSPTVFEGFSLENYTQ
                     QQSFYHNLSQGYIPIALNETKIGEKDAFQYVYSTTSPFLTENDEIINYEIYTTEGINL
                     YKISFTALLDEQLDKYLNSFKRIINTFTITR"
BASE COUNT          750 a          329 c          248 g          746 t
ORIGIN      
        1 aatgctacaa ataatcccaa aatttttaaa attaaaaatg tgatttccat tatatctgga
       61 gtggtattac ctgtttgtac cattgtaaga actacagata aaactgctat tgctaaaata
      121 tcgtctacta tggccgcacc caaaatcaat cgtgcttctc ttgtttgcat ctttcctaaa
      181 gatgtcaaaa cttgaataga tattgctata ctagtagcag tcaatgcagt agcaattaaa
      241 agtgtttcaa gtgcctctaa accatataaa gaaaatataa catagccaac aaaaaaggga
      301 acaatgacac ctagtgcacc tactgtaaat gaacttgccc ctccccgtag aaattctctt
      361 ggagtgattt ctaatccagc tacaaaaaga ataactattg cagccaattc ccctatgtgt
      421 ttgattgttt catcgagaat aactaatggt tctccattaa ataatggcaa tcctcctaat
      481 gcataaggac ctattacaat tccagctaaa agttcaccta atactactgg gagtttaatt
      541 cgatgaaaaa gctctgcaaa tatttttgca gtaaatagca atagcgcaag agaaattatt
      601 acatgaataa agattgtgga agattcggta cctatagcca tgatgattaa taacgttata
      661 aaattattga cgttataaaa attaattatt aaattagaat ttcaaaattt agactagttc
      721 caaaactaat aattggcaag aacaataata tcaaaacaaa ctttttggaa tatcgtcttc
      781 ttcctcctca taataataac caagtatatt atctattgtc tcatccaaac tagtattact
      841 ttttattagg acaaccacaa ttttatcttt ctcaatgatt tgtaatatac gtattttttc
      901 atactctgta actttccatt ttaatttacc taaaatctcg ctactgctat ggggaagatt
      961 acctatttta tcatcaagta tcttgttaaa attagtaaat atattttcaa taatactttt
     1021 ttcaacatct acatttttag caacagtcaa atcaattgcc tcacctttag aattgatagt
     1081 aaaaactgca aatatgtcat cctcaacctc tactaaatgt ttaattttgt cgtaatttgt
     1141 atcactgccc atttgaatat gtaactatat aacctatcac atttaattct aacaataaat
     1201 tattttgtaa taaaattgta taatttaaat agttttaaaa agttttagat ctaacttttt
     1261 agttattact aaaaactttt aaagatgtta tataataact atctcaaact caaatagatg
     1321 ttttaaaatt tatatgtatt aaattaggat cttgttcata taatgaaatt ccactatatt
     1381 tcaagtaata aggtattgat gatgatgatg cttataatga tgaatatgat attaactacc
     1441 tctaatactg atctatctta ttcccaatct aatggagatt ccctaatttt tgaagatcct
     1501 ttatcaggtg tacaatttaa atatacagat gaatgggtaa gacaaggctc ttttctttat
     1561 ggcgctgaat ctgaatgttc atctttgcca tgtttgagat tgcctgagat atcaattagt
     1621 acttctccaa ctgtttttga aggattttct ctcgaaaatt atacacaaca acaaagtttt
     1681 tatcataatc tttctcaagg atatatccct attgcattaa atgagacaaa gattggtgaa
     1741 aaggatgcat ttcaatatgt ctatagtaca acgtctcctt ttctaactga aaatgatgaa
     1801 attataaatt atgaaatata tactactgaa ggtataaatc tctataaaat atcttttaca
     1861 gcccttctag atgaacaact tgacaaatat ctaaactcct tcaaaaggat tataaacact
     1921 tttacaataa ctagatagaa taaatttcat tcaagaacct tagacaatag ttaaaattta
     1981 ttattttata taatagatga tgtcatttct ttctatgata ttatttttta tttatttatt
     2041 ataacaacgt caaattaatt attctaattt gat
//
LOCUS       DATIAS010000106         4008 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1110010, whole genome shotgun sequence.
ACCESSION   DATIAS010000106 DATIAS010000000
VERSION     DATIAS010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4008
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1110010"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1077
                     /locus_tag="VLA74_02105"
     CDS             <1..1077
                     /locus_tag="VLA74_02105"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSF49528.1"
                     /translation="CHYDTKQNVLVTYIHQALTNANNSHLKIYCNCHIDKIVYYIKDN
                     DKKDETEKEERKGFVKGVEGNFVDIDGNNKFKIKINSKITIISAGAIASSELLLKNNI
                     LTDIAGKGLCLHPGIEVIGDFDYEIKGNQGIPMAYTVHDFGNTRESDDTMKKWNHDGR
                     EFLLESIFLPFLQFSIALTASGPQLHQELISRINNYAMAGIVVRDQNLGQVYYTNTGR
                     LSVQYEPGLQELKAFTKGIEVLGKMWFALGANKIIVPYKRMSIIEREEDIPKLVNRIL
                     QEPKNLLIGSAHPQSGNKIGNNSKNSVVDSDCRVHGFKNLFVCDASVFPTAVGVNPQI
                     TVMAVASIISSRIINDWNTRYSNI"
     gene            complement(1312..1485)
                     /locus_tag="VLA74_02110"
     CDS             complement(1312..1485)
                     /locus_tag="VLA74_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49529.1"
                     /translation="MYLSYDRKKPVVEIVVYDYNNNVISNATVAFRSLEKTDLTIHFN
                     YMINPVDHTKPTT"
     gene            complement(1653..2054)
                     /locus_tag="VLA74_02115"
     CDS             complement(1653..2054)
                     /locus_tag="VLA74_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49530.1"
                     /translation="MNKDLEHNTQNQNFQLPSIKDIQIKLIPYKPPKHRYFESSFSKY
                     TQAIEFTVLTDNPIPIRALSPALYVGKIPATEGESLSENKYRFLAFEINKLQDNEPIY
                     FAWQGDPEALRIKTRFTYKKPTTIENSTENR"
     gene            complement(2064..>4008)
                     /locus_tag="VLA74_02120"
     CDS             complement(2064..>4008)
                     /locus_tag="VLA74_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49531.1"
                     /translation="SHIGRISVTIVTGNINGASTNGRVYLGIGGREFRLDKPGDQFQR
                     GDKDTFIIGVGSNIEFNDFNTLPSTGNNNSPRIEFENLTNYPTYLRFEPQDNDDNWNI
                     EDVKVQVIQYNDNPLVATSNKKIFVSLEGNIWLGKRSGLFLHLDQFECFNPKITYDPS
                     KLDLFSISYMVYSNGDIKGDVYYPIDGLGPFPIVFIAHGNHAIFYNPSNRNQESCTQN
                     PGWIEIPNHKGYDYLQKQLARMGIIAVSVDCNSTNCKAFGIINIEERADLIIGSIDHF
                     RTLNADLTSIFNNKIDFQSVGLIGHSRGGDAVVLVPERIAFPDVNIKCVISLAPTDTG
                     ASSGQPNGYSFMTILPAGDGDVSRNDGAKFYDKAIPGPFKCQLYVHYTNHNFFNREWP
                     NDDSLSAGPDNPPVMSRLDHEQILSAYGVAFLRNALLNHNDVIRFLCKYSIPKNVQHE
                     NVHLSFQFNNSLIIDNHEDGNTINNNSHNLPTNQIGSIVADEYSFRQGAGSFNNSFYG
                     NSIGMITTDAGINGSFVSQLPQNSNLEGKEIWVRTAEVYNMQSILPTGGTGFQLGLED
                     NNNLKVWVDSNEVDILPRPYYRGISSTKTMLKTLRFSSLCFINKNPELNINNIRSILI
                     RTDRGDNRALAFDDRDHGNIKMR"
BASE COUNT         1394 a          580 c          626 g         1408 t
ORIGIN      
        1 tgtcattatg atactaaaca aaatgtacta gtcacatata ttcatcaagc attaacaaat
       61 gctaataatt ctcatttgaa aatatattgt aattgtcata tagataaaat agtttattat
      121 attaaggaca atgataaaaa agatgaaact gaaaaagaag aaagaaaggg atttgtcaaa
      181 ggtgttgaag gaaattttgt agatatagat ggaaataata aattcaaaat taaaataaat
      241 tcaaaaatta ctatcataag tgcaggagct attgcatcat cagaactttt attgaaaaat
      301 aacatattaa cagatattgc tggtaaggga ttgtgtttac atccaggaat agaggtaata
      361 ggtgattttg attatgaaat aaaaggaaat caaggaattc ctatggcata tactgtacat
      421 gattttggaa atacaagaga atcagatgat actatgaaaa aatggaatca tgatggaaga
      481 gaattcctcc tagaaagtat atttcttcca tttttgcaat tctcaatagc acttacagca
      541 agcggaccac aactacatca agaactcata agtagaatta ataattatgc tatggctgga
      601 atagtagtgc gtgaccaaaa tttgggccaa gtatattata ctaacacagg tagattaagt
      661 gtacaatatg agcctggatt acaagaatta aaagctttta ctaaaggaat agaagttttg
      721 ggaaaaatgt ggtttgcttt gggcgctaat aaaataatag taccatataa aagaatgagc
      781 ataattgaaa gggaagagga tattccaaaa ttagttaata gaatattgca agaaccaaaa
      841 aatcttttga taggttctgc acatcctcag tcaggtaaca aaattggtaa taattcaaag
      901 aattctgtag tagattctga ttgtagagtt catggtttta aaaatttgtt tgtatgcgat
      961 gcaagtgtat ttccaactgc agtgggagta aatccacaaa ttacagtaat ggctgtagct
     1021 tctataatat cttctagaat aattaatgat tggaatacta gatactctaa tatataagaa
     1081 ataactcaaa ttgttatttt atatatacat ataacaatgc catatacttg ttaataattt
     1141 actttatcta aaatattgtt tgcaataaat atatttatac aagaaaagtt agccaaattg
     1201 taaaattaag agaactttat taaatggtga taaaaagtat tttgaataga aactactaat
     1261 tagaatatta ttgtatattt actgttaaga taataaaatc tattatctaa tctatgtcgt
     1321 tggttttgta tgatctactg gatttatcat ataattaaaa tgtattgtta gatctgtttt
     1381 ttctaatgat ctgaatgcaa ccgtagcgtt ggatataaca ttattgttat aatcataaac
     1441 gacaatttcc actactggct tttttctatc ataacttaag tacaatatta tataaataat
     1501 atgatgataa aaaatgaaaa caatactaat taaataatat tagtttcctc aatttattac
     1561 attttaacat tatattattg aatgtatatg aaaacatatt taaataaatt tatcaaggtc
     1621 tagaaaaaat atattgtaag agtatcacat tactatctgt tttctgtact attttcaatt
     1681 gtagttggtt ttttgtaagt gaatcttgtt tttattcgca gtgcttctgg gtctccttgc
     1741 caagcaaaat atatcggttc attatcttga agtttattta tttcaaaagc aagaaaacga
     1801 tatttattct cacttaaaga ttctccctct gtagcaggta ttttacctac ataaagagca
     1861 ggtgataaag ctctgattgg aattggatta tctgttaata ctgtaaactc tattgcttgt
     1921 gtatattttg aaaaagaaga ttcaaagtaa cgatgttttg gaggcttata cggaattagt
     1981 ttaatttgta tatctttaat tgagggtaat tgaaaatttt gattttgtgt attatgttcc
     2041 aaatccttat tcattgttat tattcatctc attttaatat ttccatgatc tcgatcatca
     2101 aaggcaagtg ctctattatc accacgatcg gttctaatga gaattgatct aatgttattg
     2161 atatttagtt ctgggttttt gtttataaag cataaagatg aaaaccgtag agttttgagc
     2221 attgtttttg ttgaagatat tccacgataa tatggtctag gtaatatatc tacttcatta
     2281 gaatccaccc atacttttag attattgtta tcttcaagac ctaactgaaa tccagttcca
     2341 cctgtgggca agatactttg catattatat acttcagccg tccttaccca gatttctttt
     2401 ccctcaagat ttgaattctg aggaagttgc gaaacaaaag atccattaat tccagcatct
     2461 gttgtaatca ttcctatgct gttgccataa aatgaattat taaagctacc agctccttgt
     2521 ctaaatgaat attcatctgc tacgatagac cctatttgat ttgttggtag attatgagaa
     2581 ttgttgttta tagtatttcc gtcttcatga ttgtctatta taagtgagtt attaaattga
     2641 aaagataagt gaacattctc atgctgtaca ttcttaggaa tactatattt acataaaaat
     2701 ctgataacat cattatgatt taacagagca tttctaagaa aagcaactcc atatgctgat
     2761 aggatttgtt catgatcgag tctcgacatt actggtggat tatctggtcc tgccgataga
     2821 ctatcgtcat taggccattc cctattaaag aaattgtgat tagtatagtg tacatatagt
     2881 tggcacttaa aagggcctgg tattgcttta tcatagaatt ttgctccatc atttctagaa
     2941 acatcgccat caccagctgg tagtatggtc ataaatgaat atccatttgg ttgtccacta
     3001 gaagctccag tgtcagtagg ggctaaagag atcacacact taatattcac atctggaaat
     3061 gctatacgtt caggtaccaa taccactgca tctccacctc gcgaatgccc tattaaaccg
     3121 acggattgaa aatctatttt attattaaaa atagaagtta agtctgcatt taaagtccta
     3181 aaatgatcaa tagaacctat tataagatca gctcgttctt ctatattgat tattccaaaa
     3241 gctttgcaat tagtagagtt gcaatcaact gatactgcaa ttattcccat tcttgccaat
     3301 tgtttttgaa gatagtcata tcctttatga ttaggaattt ctatccaacc agggttttgg
     3361 gtacatgatt cttgatttct atttgatgga ttataaaaaa tagcgtgatt cccatgagca
     3421 ataaaaacga taggaaatgg cccaagacca tcgataggat aataaacatc acctttgata
     3481 tcaccattgg aatacaccat atagcttata gaaaacagat ccaatttaga aggatcatag
     3541 gtaattttgg gattaaagca ttcgaattga tccagatgta aaaataatcc agatctttta
     3601 cctaaccata tattaccctc caaactaaca aatatttttt tattagatgt agctaccaag
     3661 ggattgtcat tatattggat tacttgtact ttgacgtctt ctatattcca attatcatca
     3721 ttatcttgtg gttcaaaacg tagataagtc ggataatttg ttaaattttc aaattcaatt
     3781 ctgggagaat tattgttacc agtagaaggc agagtattga aatcattgaa ttctatgttt
     3841 gatccaactc caataataaa agtatcttta tctcctcttt gaaattgatc tcctggctta
     3901 tctaatctaa attctcttcc ccctattccc aagtatactc taccatttgt actggcacca
     3961 tttatgttac cggtaactat tgttacagat attctaccga tatgtgac
//
LOCUS       DATIAS010000107         7163 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1791295, whole genome shotgun sequence.
ACCESSION   DATIAS010000107 DATIAS010000000
VERSION     DATIAS010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7163
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1791295"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VLA74_02125"
     CDS             <1..474
                     /locus_tag="VLA74_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1297 domain-containing protein"
                     /protein_id="HSF49532.1"
                     /translation="TYFNFNFFYSPLNNDTEFLGIERRLQTNLHDFTSSLTAKQQLEL
                     DIELQNIEIGHTPASIRESMLEKVFDLGDKFSKTLKEQYPPGLIGPFSLQSVVTKDLE
                     IYVYDVSFRVPGNPILATTSPYTKYYYGFSMGVGRRVAREIKHAILENRISEIVT"
     gene            complement(501..1202)
                     /locus_tag="VLA74_02130"
     CDS             complement(501..1202)
                     /locus_tag="VLA74_02130"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSF49533.1"
                     /translation="MFLIFCLGQTLIDEWQFIHYIDKKVMEQINGFGARIDFRNYLTL
                     KNNVIKTRRILNGELRQVIIEMCKLILPQGYEKIILNRIELEITEGEKKYYQISQEVK
                     KVVETLSENHTLAMISNNYSNFSLELLKKFNLYNLFKFIVFPSELNTTKPDERLFLYL
                     MKKANVTAAECVVIGDRLDTDIYPANKLGITTIRIRDSIFNLQSPQCACEIPTYSVGK
                     LKDIMEIIDGIYKKL"
     gene            1324..1842
                     /locus_tag="VLA74_02135"
     CDS             1324..1842
                     /locus_tag="VLA74_02135"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF49534.1"
                     /translation="MNIGVISDTHDDINNVKKAIKIFNEHNVDYVIHAGDYVFPGIVL
                     EFGNLNKNIKFLGVLGNNDGEKIGLANNFQRIGGNIKWDFGEIILDDLSIGIYHGTNT
                     ELTDSLILGNRFDVFIYGHTHKKDNRVIGKTQLLNPGSAHQDLQKDEPNKGPSVLIYD
                     TIFKKCEFILLN"
     gene            complement(1899..2288)
                     /locus_tag="VLA74_02140"
     CDS             complement(1899..2288)
                     /locus_tag="VLA74_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49535.1"
                     /translation="MKNSIVVHFAGNLDLARQIYQMLILEVMNISSLKSRDIEISEDE
                     TSIIISTEPSNLFLIKTIIKDKINEWFKKDPKLLEYQITEFENTIIVGKPVNLEKLTD
                     FLSCEICGYKTLYEEDLFIHRYTHAGL"
     gene            complement(2384..2869)
                     /locus_tag="VLA74_02145"
     CDS             complement(2384..2869)
                     /locus_tag="VLA74_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49536.1"
                     /translation="MFGKVNTKNWKCEYEDTVYKIYDWNNNLAGYYYPKYNTNIKNES
                     QEEEIIIKMREDKKEVEGGHLMLPMLKLDLLDVEYIQLDKTILHLEKSVNRATEWKSW
                     IKNNMSKFYINDHFVSTSREDRNMLAIILEINQRTILDEKEILLSITPLLSQLNNDGF
                     L"
     gene            complement(2969..5170)
                     /locus_tag="VLA74_02150"
     CDS             complement(2969..5170)
                     /locus_tag="VLA74_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor EF-2"
                     /protein_id="HSF49537.1"
                     /translation="MPKFKSTQDILRIIDHKDQIRNFGVIAHVDHGKTTMSDSLLAAS
                     GIISPSIAGQALALDSMKLEQNRQMTIRGANVTLFYEHEGKEYVINMIDTPGHIDFTG
                     RVTRALRAIDGVVVVSDSVEGIMTQTETVTRQALEERVRPVLYINKIDRLVKELRLDP
                     PAMQKWLSNIIAEFNKLVEIYAEPELKEKWKVSIQGNTVAFGSAKDRWGFNFKVAQKK
                     GFSFKDVYDAYTSDDPNRIKSLSERAPLHEAVLGMVVQHHPPPHVAQKYRIPKIWPGD
                     LNSDIGKALINCDENGPAVMMVTTINVDPQAGRIATGRLFSGTIKDGDEVYLIDAKRS
                     GKVQSVNIYMGNTREVVSVIPAGNIPALLGLDYAVAGETISSVKNNVAFESIKYVSEP
                     VVTIAVEPKHPKDLPKLVEALRKITVEDPNLIVKINEETGETLMAGMGVLHLEIATSL
                     LQEANLEISTSQPLINYRETIRSPAGPIMSKSPNRHNKIFMRVEPLEENVIEMIKTGQ
                     IREDMDKKELARILREKGWSADQARNVSAIDPSGNMLIDETKGVQFIQESMDSIKSGF
                     DDVVHSGGLAHETLRGVKFILHHFVPHEDPAHRGLAQLMPATRRAMLGSMLIADPVLL
                     EPILGIEVKCPQEQIGTVAGILSGRRGKLLNVDQKGVISIMLGEVPASETFDLSEAMR
                     GGTAGKAMWSTYFKNWQSVPQSVIKNLVTDIRKRKGLNPEPPNPDEFIDKE"
     gene            6030..6809
                     /locus_tag="VLA74_02155"
     CDS             6030..6809
                     /locus_tag="VLA74_02155"
                     /inference="COORDINATES: protein motif:HMM:NF022932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49538.1"
                     /translation="MNISDKSRKALETIGLTSYEIKVYLSLLEHGSLTASDISKKSGV
                     PYSKIYEVLNSLQDKVWLESNSSRPQKFFPKSPSTALEAIKLQKENEIRYNEEIINNE
                     LMPVYEKSGIKEKPEIWVVRGFYNIASKVNEIIQNSQRELLIALPQIAQEIAKPLQPL
                     LRTLHDKGIKIIVLVSEGTNVEIVKAISRIADVRIKDNMFGGGVIGDGKQVLILLGEE
                     RIEKGNFEPIAIWAEHPGLAGYAKDYFQYLWNDARSDKDRN"
BASE COUNT         2376 a         1193 c         1068 g         2526 t
ORIGIN      
        1 acatatttca attttaattt tttctattcg cctctgaata acgatacaga atttttggga
       61 atcgaaagaa gattacaaac caatttacat gatttcactt catcattaac tgctaaacaa
      121 caattagaat tggacatcga attacaaaat atagagatag ggcatacacc agccagcata
      181 cgtgagtcta tgctagaaaa ggtatttgat ttaggagata aattttcaaa gaccttaaaa
      241 gaacaatatc ctccaggttt aattggacct ttctccttac aaagtgttgt taccaaagat
      301 ctggagatat atgtttatga tgtttcattt cgagttccag gaaatccgat attagcaaca
      361 acgagtccat acactaaata ttattacggc ttctcgatgg gtgtaggacg gagggttgca
      421 agggagataa aacatgctat tctagaaaat agaatctctg aaattgttac ataatctttt
      481 gtagtttcta aattgttagg ctaaagcttt ttatatatgc cgtcaattat ttccattata
      541 tctttcagtt ttccgaccga ataggtgggt atttcacaag cgcactgcgg cgattgcaaa
      601 ttaaaaatag aatcgcgtat acgaattgtt gttattccca atttattggc tggataaatg
      661 tctgtatcta acctatctcc tattacaaca cattcagcag cagtaacatt agcttttttc
      721 atcaaatata aaaacaacct ttcatccggt tttgtagtat ttaattcaga cgggaaaaca
      781 ataaatttaa acagattata caaattaaac ttttttagta attctagaga aaagtttgaa
      841 taattattag atatcattgc taaagtatga ttttctgata gggtttctac aacttttttt
      901 acctcttgag atatctgata atattttttt tctccttcag ttatttccaa ttctattctg
      961 tttaaaataa ttttttcgta accttgcggc agaataagtt tgcacatttc tataatcact
     1021 tgtctcaatt ctccattcaa aattctccta gtttttataa cattattttt taaagtgaga
     1081 tagttcctaa aatcaatcct agctccaaaa ccattgatct gttccatgac ctttttatcg
     1141 atataatgaa taaattgcca ttcgtcaatt aatgtttgac caagacagaa tataagaaac
     1201 aatcttctta tttgaaattt tgatcgttat tatatttaat ttttttattg aatatttttg
     1261 ctatctatat taaaagatat ttataaaaaa acaaataaaa catgataaaa tatactaatg
     1321 attatgaata taggtgtaat atctgatact catgacgata ttaataatgt caaaaaggca
     1381 ataaaaattt tcaacgaaca taatgtagat tatgtaatcc atgctggtga ttatgtattt
     1441 cctggcattg ttcttgaatt tgggaactta aataaaaata taaagtttct aggagtattg
     1501 ggaaataatg atggagaaaa gattggactt gccaataact ttcaacgaat cggaggtaat
     1561 ataaaatggg attttgggga aattattttg gatgatcttt caatagggat ttaccatggt
     1621 acaaatactg aattaactga ttctctaatt ctgggtaata gattcgatgt ttttatttat
     1681 ggtcatacgc ataaaaaaga caacagggta ataggaaaaa ctcaattatt aaatcccggt
     1741 agtgcccatc aggatcttca aaaggatgaa ccaaataaag gaccttccgt tttaatttat
     1801 gatacaattt ttaagaaatg tgaatttatt cttttgaatt aatcatttta ttaagatttt
     1861 ataaccctca ctatatctct ttttttcaaa actaaaaatc ataatcctgc atgtgtatat
     1921 ctatgaataa atagatcttc ttcgtaaaga gtcttataac cgcatatctc acacgacaaa
     1981 aaatcagtca atttttctag atttacaggt tttcctacaa taattgtatt ctcaaattca
     2041 gttatttgat attctaatag ttttggatct tttttaaacc attcatttat tttatctttg
     2101 ataatagtct taattaagaa caagtttgat ggctctgtac tgattataat actagtttca
     2161 tcttcgctga tttcaatatc tctactttta agagaactta tattcatgac ctccaggatt
     2221 aacatttgat atatttgtct tgctaaatct aaatttcctg caaaatgaac cacaattgaa
     2281 tttttcatta gttatctttg atgtaaaaaa tatttattat ctttattaat atcacgaaat
     2341 tcttcttttg gaaatagtaa cctttgattg ataactctta tccctagaga aatccatcat
     2401 tatttaattg acttaataaa ggagtaatac ttaataatat ttctttttcg tccaagattg
     2461 ttctttgatt aatttctaaa attatagcta acatatttct atcctctctt gaggttgaga
     2521 cgaaatggtc atttatataa aatttgctca tgttattttt tatccaggat ttccattctg
     2581 tagctctatt gacacttttt tctaaatgca agatagtttt atctaattga atatattcaa
     2641 catctaacaa atctaattta agcattggta gcatcaaatg acctccttca acctccttct
     2701 tatcttctct cattttaatg ataatttctt cttcttgact ttcatttttt atattagtat
     2761 tatattttgg ataatagtaa ccagctaaat tattattcca atcatatatt ttgtagactg
     2821 tatcttcata ttcgcatttc caattcttag tatttacctt accaaacaac tactgttatt
     2881 gctataacat gagatttaaa aaatctatcg aataacaatt gctaagaaaa gaggaaaatg
     2941 gcttaaagct tgtctattgc acaaagatct attctttatc tataaattcg tctggatttg
     3001 ggggttctgg attaagccct tttcttttcc taatatcggt caccaaattt ttaattactg
     3061 attgaggaac agattgccaa tttttgaaat atgtactcca catagctttt ccagccgttc
     3121 ctcctcgcat tgcttctgat aaatcaaacg tttctgacgc gggaacttct cctagcataa
     3181 ttgaaatgac acctttttga tccacattca ataattttcc tcttcttcca gacagaatcc
     3241 ccgctacagt ccctatctgc tcttgaggac atttgacttc tatccccaat attggttcca
     3301 ataaaacagg gtccgcaatt aacattgaac ctaacattgc tctcctcgtt gcaggcatta
     3361 attgagctaa acccctatga gccgggtctt catgaggaac aaagtgatga agaatgaatt
     3421 tgactccacg aagcgtttca tgcgccaaac ccccagaatg tacgacatcg tcaaaaccag
     3481 atttaattga atccatagat tcttgtataa attgtacacc tttagtttca tctatcaaca
     3541 tattaccaga tggatcaatg gcgctaacat tcctagcttg atcagcactc catccttttt
     3601 ctctgagaat cctagcaagt tcttttttgt ccatgtcttc tcgtatttgt ccagttttaa
     3661 tcatctcgat tacattttcc tcgagtggct ctacacgcat aaatattttg ttgtgtctat
     3721 ttggagattt actcattata ggacctgcag gtgaacgaat tgtttcccta taattgatta
     3781 aaggctgtga tgttgaaatt tctagatttg cttcttgtaa aagggaagtt gctatttcta
     3841 aatgcaaaac tcccattcct gccattagtg tttctcctgt ctcttcattt atcttaacta
     3901 taagatttgg atcctcaaca gttattttac gaagggcttc tacaagttta ggtagatctt
     3961 ttggatgttt tggttcaact gctatagtta ctacaggctc agaaacatat ttgatcgatt
     4021 caaatgcaac attatttttt acacttgaaa tagtttcccc agcaacagca taatctaaac
     4081 ctaaaagagc aggaatatta cctgcgggta ttacacttac tacttcccta gtattgccca
     4141 tatagatatt tacagactgt acttttcctg atctttttgc atcaataagg taaacttcat
     4201 cgccgtcttt aatagttcca gaaaagagtc tgcctgttgc tattcgaccg gcctgaggat
     4261 ctacgtttat agttgttacc atcatgactg caggaccgtt ttcatcacaa tttattaatg
     4321 cttttccaat atcagaatta agatctcctg gccaaatctt tggaatccta tatttttgtg
     4381 ctacatgtgg aggaggatgg tgttgaacta ccattccaag aactgcctca tgaagtggag
     4441 ctcgttcaga aagagattta attctattag gatcgtcaga agtataggca tcatatacat
     4501 ctttaaaact aaatcctttt ttctgtgcta ctttgaaatt aaaaccccat ctatcttttg
     4561 cagaaccaaa ggctacagta tttccttgga tactaacttt ccatttttcc ttcagctcag
     4621 gttcggcata tatttctaca agcttattaa attctgctat tatattagat aaccattttt
     4681 gcattgcagg aggatcaaga cgtaattctt ttactaatcg atcaattttg ttaatatata
     4741 gaacgggccg aactctttcc tctaatgctt gtcttgttac agtctcagtc tgggtcatta
     4801 tcccttctac cgaatcagac actacaacta caccatctat tgcacgaaga gctcttgtaa
     4861 ctctcccagt aaaatctatg tgtcctggag tatctatcat attaatgaca tattcttttc
     4921 cctcatgctc ataaaataaa gttacattgg cacctctaat tgtcatctgt cgattttgct
     4981 ctagcttcat agagtctaaa gctaatgctt gtcctgctat agaaggcgaa attattccag
     5041 atgcagctaa gagactatca ctcatagtcg ttttaccatg atcgacgtga gcaataacac
     5101 caaaatttcg gatttggtct ttatgatcaa taatccttaa aatatcttgt gttgatttga
     5161 atttaggcat atttagacat aacaaaaaaa atgcgcaggg ttattaaacg ttccttatat
     5221 agattatccg cacgtcagaa gtaaacaagt atgaaattat ttaatataat gaagcgatat
     5281 tttgatggtg attggatatc tgattggtat ccacttttca gaacacaggt ggccttatat
     5341 cagagaattt tattacttcg ttagttgact aatctggagg atatcaattt gcaatcggtg
     5401 ccttaaatat tacgcctaac cgtgtacttc tctatactga aaacttcagt tgaattttgg
     5461 ctctagaaaa tagccggaca gaaaaataat gctgtatttc aaagatagaa ctgaattatt
     5521 tggtgattat taaagtgcat caataaacaa aattgtgatc aacaatatat atacaattag
     5581 aacaagatat ctaactattt ataacaatat cactacaaac tattccattt ctgaaagaat
     5641 gtgaaattcg atgaagttaa cagttgatat aattattctg gcgagcaaaa attcatttac
     5701 aaattctttc aaataaaaat ttttaatatg tttgaaaatt gatcctttca atgattactg
     5761 aatacaagaa atttagatag ccaatatata attaaaagtt gatgatgcag attatcaatt
     5821 ttagacaatt atttattgaa atacaaaata ataatatcta taaatcaaat tgagaaatca
     5881 agtttcaaaa gagtcttttg cagtattcaa aatccagtaa agataccgtt cattaatctc
     5941 aatcattata cgaatttttc tgtatcaaac ttcatttttt agtatttgaa cagacttata
     6001 ttactcgcta taaataaaaa tttgatcgca tgaacataag tgacaagtca agaaaagcat
     6061 tggagactat tggcttgaca agttacgaaa ttaaagtata tttatcatta ttggaacatg
     6121 gatctttaac tgcttcggat atttctaaaa aatcaggggt accttattca aaaatatacg
     6181 aagtactaaa ttccttacaa gataaagttt ggctagaatc gaacagttct aggcctcaaa
     6241 aattttttcc caaatctcct tcaacggcat tagaagcgat aaaactgcag aaagagaatg
     6301 aaataagata caatgaagaa attattaaca atgaattgat gcccgtatat gaaaaaagcg
     6361 gcattaagga aaaaccagaa atatgggtag ttagaggatt ttataatata gctagtaaag
     6421 taaatgaaat aattcaaaac agtcaaaggg aattgctaat agccttacca cagatcgctc
     6481 aagaaatcgc caaaccacta caaccacttc ttagaacctt acatgacaaa ggaattaaaa
     6541 taatagtctt ggtgtccgaa ggaaccaatg tagaaatagt taaggcaatc tccagaatag
     6601 ctgatgtcag aatcaaagac aatatgtttg gaggaggagt tattggagat ggtaaacagg
     6661 tgttgatttt actgggtgaa gaaagaatag aaaagggtaa ctttgaacca atagcaatat
     6721 gggcagaaca tcctggatta gctggctatg caaaggatta ttttcaatat ttatggaatg
     6781 acgcaagatc tgataaggat cgaaattaat caataattta tttagttgag aagaattagt
     6841 aatttcaata aataccattt atgagttaaa tttttatttt attctatagt gtggattttg
     6901 gcaaacgatg actaaactag ccctactgat aaataaaaat gatgaagatc ttgagtttgg
     6961 agtttgtcaa atccatcatt gatttggtct aaggtaaatt ccattatatt agatatcctt
     7021 tcttccctta acaaactctt gaaagttttc ttttgctttt gtatatgaca tctgaattgg
     7081 tggatgttta aaacaatatg ccgaaacact ttcaagtgaa ccagataacc ctctgtcaat
     7141 gccaatttta gtagctctta ttg
//
LOCUS       DATIAS010000108         3622 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1383416, whole genome shotgun sequence.
ACCESSION   DATIAS010000108 DATIAS010000000
VERSION     DATIAS010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383416"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            606..2354
                     /locus_tag="VLA74_02160"
     CDS             606..2354
                     /locus_tag="VLA74_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49539.1"
                     /translation="MSNRIIDSLHNDIGKTIASEKFLNTMDSFWFALKPNVIINSFDF
                     VTVENLFDSKSIGIVKELQAIAEHDYYNNYFSDYYTKSTTKEKLKQEEKEEKEQFSKM
                     QLNGVILAKVAIMANGGVKAQGYKEDISINFPVGVGKTVRFATEEEIIFALGIPQMVN
                     PIPAGIIETTNGLEIPISLGLSYLAGADTAHINASGISGNKKSTYILFLLQSSYQTLN
                     RMNQNVALIIFNTKEQDLLYIDQKEKYIKKRTERLFDVLDLDIEPFENVTYFLPRGKD
                     GKPNSIHVPKNYKTYSYELKDVYDRLELLFSEPYELHHDFSSIINYISESWPLKSNIG
                     NKDISTWTDLTEFREYPEAIISNKSSLLYFLGRLQRFRKSPMFIDKKKTSTYLGNEIK
                     NIKPGEVFVIDVATISSFDVQAFVVGDVMKSIDEMYSSRYYNLEDDNNSNNKDIDSDK
                     NNVQKDQEKLHYILVFVDEINRYIPKSQNGKMSPVSEQIMRTVIAGKTRGTILFSAQQ
                     FKSATDYRLQENTDLHITAKLGLSELSTEPYSMLDESTKMNIVRLNKGELVMIHPAFR
                     HPIKIGFPKGTYKEPK"
     gene            2638..2808
                     /locus_tag="VLA74_02165"
     CDS             2638..2808
                     /locus_tag="VLA74_02165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49540.1"
                     /translation="MNKIVSTKKPSAIFLAVILLVAGAIVMSSPFVAYGEEAYQSFKC
                     NGNNVYQLAYVF"
     gene            complement(3007..3354)
                     /locus_tag="VLA74_02170"
     CDS             complement(3007..3354)
                     /locus_tag="VLA74_02170"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49541.1"
                     /translation="MDTILQKEEEGFTVVSLDESFFFYDSLVRKVWISKYERPVVRIT
                     GSHQESVLFGATSLEGKQLFRQDDWFDENTFLDYLKQIHRKFPKCYLFLDKAKQHYRP
                     KKVLEYFADNKDR"
     gene            complement(3312..3548)
                     /locus_tag="VLA74_02175"
     CDS             complement(3312..3548)
                     /locus_tag="VLA74_02175"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF49542.1"
                     /translation="MDYKTGRRSDCQKKSGGGIKYHYTHIYRLMHKWGFKQKKVPRRV
                     HVNTASKEEKEDFKKEPEKYYWILSSKKKKKGSQ"
BASE COUNT         1296 a          537 c          528 g         1261 t
ORIGIN      
        1 gaaaaataga tatacaaata ttataatatt ctcatagatt accttataca cacttttaat
       61 atgtaatatc aaattcattt gaaccaattt tgtctaactg attttaattt aagtttctaa
      121 caataaaagc taaatactat gtagtagaac cctactacat ggaaggctct actcccgaca
      181 atcttactgt ttttctaagt gaaccaaaat gtcaaagaag gtgaaccatt taatataatt
      241 gtggccttta ttaatatcaa attataaaag ttaataggtt ttattgttgt taaatcaaat
      301 taattgaata gtttagatag ctttatttca ttacaaaaag gatatttata tggcaaatca
      361 ctttttgaat tattaattat ttgagtctat attagatata cctcctaaca gtccaagtct
      421 tatagattgg ataactcacg caatttgctt tgacaatcca ccattgaggc cttaacttgc
      481 tttttttata tttaaacaaa ctccagaaag gaaaactaag atttgaagac caatactgca
      541 aaaaatctag tttatagtat ctatgttatc aaagatattt atcttttata taatattcat
      601 atataatgtc aaacaggata atagactctt tacataatga tattggaaaa actattgctt
      661 ctgaaaaatt tcttaataca atggatagtt tttggtttgc tctaaaacct aatgttatca
      721 taaactcttt tgactttgtt acagtagaga acttatttga tagtaagtct attggaattg
      781 taaaagaact acaagcaatt gctgaacatg attattataa taattatttc tcggattatt
      841 atacaaaatc cactacaaaa gaaaaattga agcaagaaga aaaagaagaa aaggaacaat
      901 tttccaagat gcaactaaac ggagttatat tggcaaaagt tgcaataatg gcaaatggtg
      961 gagtgaaagc acagggatat aaagaggata tatccataaa ttttccagta ggggtaggta
     1021 aaactgtgag atttgctact gaagaagaga ttatatttgc tttaggaatt cctcaaatgg
     1081 taaatcctat accagcaggt atcattgaaa caacaaatgg ccttgaaatt cctatttctt
     1141 tgggtctatc ttatttggca ggggcagata cagcacatat aaatgcatca ggaatatctg
     1201 gtaataaaaa aagcacatat attttattct tgttgcaatc atcatatcag acactcaata
     1261 gaatgaatca aaatgttgca ttgataatat ttaacacaaa agagcaagac ttgctatata
     1321 tagaccaaaa agaaaaatat atcaaaaaaa gaaccgaaag actatttgat gtactagatt
     1381 tagatataga gccatttgaa aatgtaactt actttttacc acgaggaaaa gatggtaaac
     1441 ctaattctat tcatgtacca aagaattaca aaacatattc ttatgagctc aaagacgttt
     1501 atgatagact tgaattgtta ttttctgaac cttatgagtt acatcatgat ttttcatcaa
     1561 taataaatta catttctgaa tcttggccac taaaaagtaa tattggaaac aaggatataa
     1621 gtacatggac tgaccttact gaatttagag aatatcctga agcaataata tcaaacaaat
     1681 cttctcttct gtacttttta ggtagattac aaagatttag aaaatctcct atgtttattg
     1741 ataaaaagaa aaccagtact tatcttggta atgaaattaa aaacatcaaa ccaggtgaag
     1801 tctttgtaat agatgttgca acaatatctt cttttgatgt gcaagccttt gttgtagggg
     1861 atgtaatgaa aagtattgat gagatgtatt cttcaagata ctataacctt gaagatgata
     1921 ataatagtaa taataaagat atagatagcg ataagaataa tgttcaaaaa gaccaagaaa
     1981 agctacatta tattttagtc tttgttgatg aaattaatag atatatacct aaatctcaaa
     2041 atggaaaaat gagtccagtt tcagaacaaa taatgagaac agtaattgca ggaaaaacca
     2101 gaggaactat tttattttct gcacagcagt tcaaaagtgc tacagattat agattacaag
     2161 aaaatactga tttacatatt acagcaaagc taggattatc agaattatct actgagcctt
     2221 attcaatgct tgatgaaagt acaaaaatga acatagttag actaaataaa ggagaattag
     2281 ttatgattca tccagcattc agacacccca taaaaattgg atttcctaaa ggtacatata
     2341 aagaaccaaa gtaataatta ttcttttgta aataagtgtc taaatcaggt ctatttaaaa
     2401 tttacctcac acttattact atttaatatt agactcttat tttcgcaccg cgatcggtat
     2461 tattaaagtt cttgcaaggt tcagttgtgt ctaatagatg attataatta atgattctct
     2521 atatattcat cttattagat tattttccaa agcaatgagc tatataattc ttatcatcaa
     2581 aaaatcttta ttcatccgac atatttcaga tataataaag tataatatac ttaaacattg
     2641 aataaaatag tatcaacaaa aaaacctagt gcaatttttt tagctgttat attactagtc
     2701 gcaggagcta ttgtaatgtc ttctccattt gttgcctatg gagaagaggc ttaccaaagt
     2761 tttaaatgta acggtaacaa tgtataccaa ttagcatatg ttttctaatt atcaatttta
     2821 gcaagcaaat agtttctcat atccagattg aatctttttg ttctaaaata tgaggatatt
     2881 ttctttttaa aatctgtaaa tgatgaataa tactgtagga ctagaagatc gtttttggct
     2941 atattctata tttcttccag taccatgaat tcaggagatg cagttggaag atatacaggt
     3001 attaaactat ctatctttat tgtcagcaaa atattccagt accttttttg gtctgtaatg
     3061 ttgttttgcc ttatccagga acagatagca ttttggaaat tttctatgaa tttgttttag
     3121 gtaatccaaa aaagtattct catcaaacca gtcatcctgt ctaaacaatt gttttccttc
     3181 taaactggta gcaccaaata agactgattc ctgatgggat ccggtaatcc ttacaactgg
     3241 tctttcatat ttgcttatcc atactttccg tactagtgag tcatagaaaa agaatgattc
     3301 atcaagcgat actactgtga acccttcttc ttctttttgg aggatagtat ccaatagtat
     3361 ttctctggct cttttttaaa atcttctttt tcctcctttg atgcagtatt tacatgtact
     3421 cttcttggta ccttcttctg tttgaatccc catttgtgca ttagtctgta aatgtgggta
     3481 taatggtatt ttattccacc accactcttt ttctgacaat cagatcttct acctgttttg
     3541 tagtccatcc ttgtttgctg gatgctaact cattttttat ctcgtatact ttctcttctg
     3601 ctggtatatc tggatgtcta cc
//
LOCUS       DATIAS010000109         5247 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1791980, whole genome shotgun sequence.
ACCESSION   DATIAS010000109 DATIAS010000000
VERSION     DATIAS010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5247
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1791980"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..473
                     /locus_tag="VLA74_02180"
     CDS             153..473
                     /locus_tag="VLA74_02180"
                     /inference="COORDINATES: protein motif:HMM:NF016308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49543.1"
                     /translation="MSKTNNFALTEVGEILHKARSGRLIVKLDEKNLVNSGDLLFNSS
                     CVKVGSINELIGPVRSPYASIIMSNDKFQVVNGDKIYKSDLRNLEGGGKSRKFKKRNM
                     RGRK"
     gene            478..1596
                     /locus_tag="VLA74_02185"
     CDS             478..1596
                     /locus_tag="VLA74_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TFIIB-type zinc ribbon-containing protein"
                     /protein_id="HSF49544.1"
                     /translation="MVCLEYCNNCPECHSSLIHDFSKGEFLCQNCGYVVLDEVNDYGP
                     ESIAKDFEEKNRNTRASGAMSFSQHDYGLRTEIGNASKDYGGKLINYTVAEQMTNIRK
                     WHSRIRVSSSKERRLSNVLSKISETCSNLSLPKILIETAAMIYRTYEKNNEAKGKSVS
                     CIAAATIYLACKRCSIVRSIEEIVNATGASPNDRSCLKLASKYYRIMSMELGIYHNNF
                     SYENNTYDQSIKIDNSDSLAVMGGYFIQTKLNTQTNKSKYDDNKNGNKNSIIPCTLSI
                     DNYIAKLINLAKLDTRIERLAIDLAHKTLNNLLADGKSPNGLAAAYIYLSAVLLGMNI
                     LQIDVSGLAGVTEVTIRNRCKDILCSSRIIITIKPHIR"
     gene            1655..1960
                     /locus_tag="VLA74_02190"
     CDS             1655..1960
                     /locus_tag="VLA74_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49545.1"
                     /translation="MPDFFEIERLVEDLAKLYSTACTTTWYKITRVAYPTNEEFRKKV
                     VEFMKHFEYTLSIFPESEEGNKFKKYALELLKREIDNVLSGNNKEVEKRYRYFIDSK"
     gene            2242..3696
                     /locus_tag="VLA74_02195"
     CDS             2242..3696
                     /locus_tag="VLA74_02195"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSF49546.1"
                     /translation="MLQDKYDYDIIVAGGGLAGMIAATSAAYFSNQSLRILVIDRNSF
                     SDLGKKTVNGWVCGDAVGKNSVDYMTNRIGISWGSPEIEHPVKGVIAYSPDHETGISF
                     DGDGYILNRRILPQRQLKDALKMGVEVVDNIALRSLISNNNYIIGVEGENLKTKQTFK
                     KTAKLIIDCTGVTSVLRTNLPVKSFIQKKIDRDDLESTGRYIYNFKICNDEKTYFDPD
                     YCIIHLDQKLAPGGYAWVFPKGKNKVNIGLGVQQKAFNIYNKQYGKNKNLKNLIDEYV
                     QINPVISEPELPNGDDQGNTWGTWQVSVRRQNDCLVSNGYMMVGDSAWMPKPLDAGGI
                     GPAIIAATIAGKDAVDAIESSDVSEKSLWKYNKDFIDDYGYKTAGLEVFRRMLQTLTN
                     EQIDYGMKHFLSKFDIEKIANGEHPEFGALDKLGMLIRGALNKKLADDLKFTSDLNKK
                     LVDHYYNYPDVPEKFIDWKSKLDGFLNEANSKFK"
     gene            complement(3939..4640)
                     /locus_tag="VLA74_02200"
     CDS             complement(3939..4640)
                     /locus_tag="VLA74_02200"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49547.1"
                     /translation="MFGLGYTFWSEVISVLREIIPVYDKVNKVISLGKAESYRFIGIS
                     ENIRPGNFILDAGSGFGNMSITASRYTNYQVKIILYDPILEMLKNSKQIMKLETLFSK
                     SSGIFEYMPFRDETFDIVMCGYSLRDAINLENAISEVHRILKKEGKFIIVDLGKPDNY
                     FIRIIVSFYLKYILKILAYLAAGEHGLQFKTLYGTYLRWPQNDILHSLLSTKFSDVNF
                     KRKMNGASIIVSATK"
     gene            4810..>5247
                     /locus_tag="VLA74_02205"
     CDS             4810..>5247
                     /locus_tag="VLA74_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49548.1"
                     /translation="MLINDYSEYYTVSQEYVCSDCGSLLLHSNPTTLESMREVHEQLC
                     VVKREKFVAAQSIKEIPSQTAAISQANVETVLATTSPSPDMGPAGISQLGETSISLTG
                     SGTSYSKVDGPIDTSFKTKRKTTGKFKGITVWGPVDAPGQLGIW"
BASE COUNT         1917 a          766 c          913 g         1651 t
ORIGIN      
        1 aatagaaaat aaaaagaaat gtgaattaat ctcaacaatc gcttcaaaaa tcagtgcaag
       61 aagaacaagg aacaagagaa cttgatgaaa aagaaatata gttttaattc tttatcaatt
      121 taataaatta ttattgaccg aatgatatga aaatgagtaa aacaaataac tttgcgttga
      181 cagaagtcgg tgaaattctt cataaagcaa gaagtggaag attgattgta aaacttgatg
      241 aaaaaaatct agttaattcc ggcgatttac tttttaattc tagctgtgtg aaagtaggaa
      301 gtatcaatga actaatagga ccagttcgtt ctccatatgc ctctataatt atgtcaaatg
      361 acaaatttca agttgttaac ggtgataaaa tatacaagtc tgatctaagg aatctcgaag
      421 gtggtggaaa gtcaaggaag tttaaaaaaa gaaatatgag aggtagaaaa taataaaatg
      481 gtgtgtctag aatattgcaa taattgtcca gaatgtcatt ctagtttgat tcacgatttt
      541 agtaagggtg aatttttgtg tcaaaattgc ggttatgtgg tattggatga agtgaatgat
      601 tatggaccag aatccatagc caaggatttt gaagaaaaaa atcgtaacac gagagcaagc
      661 ggagcaatga gtttttctca acatgattat ggtttaagaa cagagatagg caatgcttca
      721 aaggattatg gagggaagtt aattaattac acagtagctg aacaaatgac caatattagg
      781 aagtggcatt caagaatacg tgtatcgtca tcaaaagaaa ggagactttc taatgttttg
      841 tcaaagatta gcgagacttg ttcaaatctg tcactgccca agattctaat tgaaaccgct
      901 gcaatgatat atcgtaccta tgaaaagaat aatgaagcaa aaggaaaatc agtatcttgt
      961 atagctgcgg caacgatcta tcttgcgtgt aaaagatgtt ccattgtaag atctatcgaa
     1021 gaaatagtaa atgccacagg tgcatctcca aatgataggt cgtgcctaaa acttgcctcc
     1081 aaatattata ggattatgtc tatggaattg ggaatatatc acaataactt ttcatatgaa
     1141 aacaatactt atgatcaatc aattaaaatt gataattcgg atagcttggc ggttatgggt
     1201 ggttacttta ttcaaaccaa actcaatacc caaactaata aatcaaaata tgacgacaat
     1261 aaaaatggaa ataaaaactc aattattcca tgtaccttat ctatagataa ttatatagcc
     1321 aaattaatta atctagcaaa actcgataca cgaatagagc gattagctat tgatttagct
     1381 cataaaactt taaataatct attggctgac ggaaaatctc caaacggact tgctgctgca
     1441 tacatttatc tttcagccgt tttattggga atgaatattc ttcaaataga tgtatcagga
     1501 ttagctggag ttaccgaagt tactatcagg aacagatgta aagatatcct ctgtagctca
     1561 agaataataa taactataaa accacatatt cgataatatt ttcaatcctc ttcaggcttc
     1621 agaaatatat tagataacta cttctttata attaatgcct gacttttttg agatcgaacg
     1681 acttgtagaa gatcttgcaa agttatattc gactgcttgc acaactacat ggtacaagat
     1741 tactcgagtg gcttatccta caaacgaaga attcagaaaa aaagttgttg aatttatgaa
     1801 gcattttgaa tatacattgt caatttttcc tgaatcggaa gaaggaaata agtttaaaaa
     1861 atatgcattg gagctactca agagagaaat tgataacgta ttgtctggaa ataataaaga
     1921 agtagaaaaa cgttacagat attttataga ttctaaatga attttctgat aaaggtattt
     1981 tataacctta aactgctatt tattaatttt aaatcttctt tataaaatgg cttttaactt
     2041 ctgggatttt aaatatatag ttttttacat gggattttat cttatctgca agtattcatt
     2101 cgatcttaat aagattgtga aaattatctt tattaaatat ggcaaaaaat tacttcagaa
     2161 ttatgcaaac attgttatat atgtagaatc atggataatt aacttaacta taaatattgt
     2221 aaatttacaa aaatcatatt tatgttgcaa gataagtacg attatgatat catcgtagcc
     2281 ggaggtgggt tggcaggaat gatagctgct acctcagctg cttacttttc taaccaatct
     2341 ctcaggatac ttgtaatcga caggaattca ttttccgatt taggaaagaa aacagttaac
     2401 ggttgggttt gtggagatgc agtaggaaag aacagtgttg attacatgac aaatagaatc
     2461 ggtatatcct gggggtctcc agaaatagag catccggtaa aaggggtaat cgcctattct
     2521 cctgatcatg aaactggaat ttcttttgac ggtgatggtt atattcttaa cagaagaatt
     2581 ttacctcaac gccagttaaa agatgcttta aaaatggggg ttgaagtcgt tgataatatt
     2641 gctttacgat cattaatctc caataataat tacataattg gtgtagaagg tgaaaacctg
     2701 aaaacaaaac aaacgttcaa aaaaactgca aaattaataa ttgattgtac aggagtcaca
     2761 tcggtattac gaaccaacct gccagtcaag tcattcattc aaaagaaaat agatcgggat
     2821 gatctggaat ctacagggag gtatatctat aattttaaaa tatgtaatga tgaaaagaca
     2881 tattttgatc cagattattg tataattcat cttgatcaaa aactagctcc tggtggttat
     2941 gcatgggtat ttccaaaggg gaaaaataaa gtaaatattg gtttaggtgt gcagcaaaaa
     3001 gcatttaaca tatataacaa acaatatgga aaaaacaaaa atcttaagaa tttaattgac
     3061 gagtatgttc aaattaatcc cgtaatatct gaaccggaat tacctaatgg cgatgatcaa
     3121 gggaatactt ggggtacctg gcaggtttca gtaagaagac aaaacgactg tcttgtttct
     3181 aatggataca tgatggtagg agattctgca tggatgccaa aaccattaga tgcaggaggg
     3241 ataggccctg ctataattgc cgcaacaata gcagggaaag atgctgtgga cgcaatagaa
     3301 tcttcagatg tttcggaaaa gagtctatgg aaatacaata aggattttat tgatgactat
     3361 ggatacaaaa ctgctggttt ggaggttttt cgtcggatgc ttcaaactct tacaaatgaa
     3421 cagatagatt atgggatgaa acattttctt tctaagttcg atatcgagaa aatcgctaat
     3481 ggagaacatc ctgaattcgg agcattggat aaactaggca tgttaattag gggtgcgtta
     3541 aacaagaaat tggcagatga tctaaaattt acttctgact taaacaaaaa acttgtggat
     3601 cactactata attatccgga tgtccctgaa aaatttatag attggaagtc taaattagat
     3661 ggttttctta acgaagcaaa ttctaaattt aaataaataa attggacata agttaaataa
     3721 aactgaatac gaaaatggaa atttttgaac cttcaatata tttggctatc tttccataca
     3781 tttttatatt aatgtttcca ataattggga taatattagt aacgagacag ttatttaaat
     3841 caaaataatt taatttttat aattatgctc ctaaatcgtg tacgcttctc ttagaatttt
     3901 ataagacatg cttgtttgat aaaattgaat atacccaatt actttgttgc ggaaacaata
     3961 atcgatgctc cattcatttt tcttttaaaa ttaacatctg agaatttagt ggataataac
     4021 gaatgaagaa tatcattttg aggccatctt aggtaagtgc cataaagtgt tttaaattgc
     4081 aaaccatgtt ctcctgcggc tagataagct aatattttta agatatattt taaataaaaa
     4141 ctgacaatta tcctgataaa ataattgtct ggctttccta aatcgactat tataaatttg
     4201 ccctcttttt ttagtattct atgtacctca gatattgcat tttcaagatt gatagcatct
     4261 ctcaatgaat aaccacacat tacaatatca aatgtctcgt ctctaaatgg catgtattca
     4321 aaaataccag aagattttga gaataatgtt tccaatttca taatttgttt agaatttttc
     4381 aacatctcta aaattggatc atacaatatt atcttaactt gataattagt atatctagat
     4441 gctgttatgg acatgtttcc aaatcccgat ccagcgtcta atataaaatt acccggacga
     4501 atattttcac ttataccaat aaatcgataa gattcggcct ttcccaaaga aatgacttta
     4561 tttactttat cgtatacagg aattatttct cttaatacag aaataacttc actccaaaaa
     4621 gtatatccta atccgaacac gtgtaaaatt gattaatgat aaacatctat tttattttat
     4681 ttgatattat ctaaaatact ttatttcaca aatgtgaaaa actaaaagat aattctttct
     4741 aatgggtcga cgataaaaat ttgccaaaat ttaacgatac tttggatcga aagtacactt
     4801 gataaccaaa tgttgataaa tgactattca gaatattata ctgtgtccca agaatatgta
     4861 tgcagtgatt gcggttctct ccttttacat tcgaacccta ctacactaga aagtatgagg
     4921 gaggtacacg aacaactgtg tgttgtaaag agagaaaaat tcgttgctgc tcaatccata
     4981 aaagaaattc catcacaaac tgctgcaatt agtcaagcta atgtggaaac cgtacttgcc
     5041 acgacatctc ctagtcctga tatgggacct gctggaattt cacaacttgg tgaaactagt
     5101 atttcactta ccggttcggg aacaagttat tcaaaagtag atggtccaat agatacctca
     5161 tttaaaacca aacgtaaaac aacaggtaaa ttcaagggaa taacggtctg gggacctgta
     5221 gatgcaccag gacagttggg aatatgg
//
LOCUS       DATIAS010000110         2107 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1383726, whole genome shotgun sequence.
ACCESSION   DATIAS010000110 DATIAS010000000
VERSION     DATIAS010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383726"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(586..1464)
                     /locus_tag="VLA74_02210"
     CDS             complement(586..1464)
                     /locus_tag="VLA74_02210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49549.1"
                     /translation="MSETQFLNKKKDICFVISPIDKEYSDIRKNSDKLYNHILKPVIE
                     KLGYEITRSDKISQPGMITTQILSYVINSELVIADLSEYNANVFYELAIRHATKKHYI
                     QVIRRGYDIPFDLKNTRTIFYDFDIEEAENAKTKLEELLVSSQGMGEVENPISNAINF
                     QAFNVSEDPNKQVIGRIFEMVQNMNSTLESIKDTIKKENKGGINHRLNLKLLTEYEKL
                     LDDWKTVLYLYDNLDNYLFKDKEVFNDVVNRVRTYFPNVDRFKDLNEQDIINTRIELL
                     KLQMDLRDLYEQRKKG"
     gene            complement(1896..>2107)
                     /locus_tag="VLA74_02215"
     CDS             complement(1896..>2107)
                     /locus_tag="VLA74_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49550.1"
                     /translation="INQEKNHTYVSFDCKDHIFLINESDEVIPTKASTLGTNNTNIVF
                     NPGTNKIYVVDTESNIVYVKDVSEL"
BASE COUNT          710 a          299 c          286 g          812 t
ORIGIN      
        1 tcatgggtgt aaacaagtac aatttacagg catattccaa gacatttcag tttattcata
       61 ataatagaac aaagacaaga aaggaaagat tcatggagat tctttgtaac aggtagctga
      121 aacattcaga aataagagcg ataaaataaa tgagacgtat atcagatatc ataaaagtat
      181 agatccttct acatctatag atggtattaa tcagccattt gactttagat taaatttctg
      241 tttagaaaat aatcttatac ctttcataaa cacaaactca aataatgaaa tcattattat
      301 atcggacttg atacaagagc taaaaaatcg tagaatctat ggaatctcca gtttgaaaga
      361 agtatctaat attatagatg gttttgaata tggtcaaaag aaattaggaa agaacagaaa
      421 tgttagagct gcttttggaa ctcattttgt ctttttctct taatagttga tttatatctt
      481 gtaattcttc tattttagtt taagtccgcg ccttgtcttt ttagttgctg tatattgaga
      541 aaagtcaagt aaggttcaat cttttgaaat atttctgttt ttgctttatc ctttttttcg
      601 ctgctcataa agatctctta aatccatttg cagtttaagt aattctattc tagtattaat
      661 tatatcttgt tcattaagat ccttaaaccg gtcaacattt gggaaataag ttcttactct
      721 gtttacgaca tcgttgaata cttctttatc tttaaataaa taattatcca aattatcata
      781 taaatataga acagtcttcc aatcatctaa taacttttca tattctgtaa gtagctttaa
      841 attcagcctg tgatttatcc cgcctttatt ttctttctta attgtatctt taattgactc
      901 taaagtagaa ttcatatttt ggaccatttc aaaaatcctt ccaattacct gtttatttgg
      961 atcttcgcta acattaaaag cctgaaaatt aatagcattt gaaattggat tttctacttc
     1021 tcccattcct tgagatgaaa ccaatagttc ctcaagtttt gttttggcat tttcagcttc
     1081 ttcaatatca aaatcataaa aaattgtgcg tgtattttta agatcgaaag ggatatcata
     1141 acctcttcga attacttgta tgtaatgttt ttttgtagca tgtctaatgg cgagctcata
     1201 gaatacgttt gcattatact ctgataaatc agctataact aattcagaat taataacata
     1261 agaaaggatt tgggtagtta tcattccagg ttgagaaatt ttatcagatc ttgttatttc
     1321 atatcctaat ttttctataa ctggttttaa tatgtgattg tagagtttgt cagagttttt
     1381 tctgatatct gagtattctt tatcaatagg actgatcaca aaacaaatgt cttttttctt
     1441 attcaaaaat tgagtctcag acataatttt tgtattattt ttccaatagt taagcatttt
     1501 taaggtatat tataaaaaaa ttatcaagat tgaaaagaat tcaatatctt ttagttgtat
     1561 aattctactt tcatctaact tgaacattag aaaatcaaaa atagtttaaa ctaatactat
     1621 atggtatgaa gtctcaacaa acaagacatc aaaccgaggg ttcaaatccc atccccggat
     1681 tagttatact gagtaggttc attctatata atgtaattga gaaatggatg aatcagaata
     1741 ttgtatttga atattgattt cttcagattt attctattaa ctaagcttat aagttaccaa
     1801 ataagtaaca gtttattatc caaaccaaat tctttatgtt cccaagtctt aataacatat
     1861 tagtttgaat atacttataa tattaaattt cttgactata gttcacttac gtctttgaca
     1921 tagacgatat tagattcagt atctacaaca taaattttgt ttgttccagg attaaagact
     1981 atgttggtat tatttgttcc taaagtacta gctttggttg gtataacttc atctgattcg
     2041 ttaatcaaaa aaatatgatc tttacagtca aagcttacat atgtatggtt tttttcttga
     2101 ttaatag
//
LOCUS       DATIAS010000111         2695 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1792051, whole genome shotgun sequence.
ACCESSION   DATIAS010000111 DATIAS010000000
VERSION     DATIAS010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1792051"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(287..682)
                     /locus_tag="VLA74_02220"
     CDS             complement(287..682)
                     /locus_tag="VLA74_02220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49551.1"
                     /translation="MPKPGFKSITVSENVYNKLFKVYEKRKNDLELKGITSFSGYLTS
                     MMEETMIKHEAFAKQAPFMEKISIDIDRVLLKDNKKNRIVEVILKNGELRCLVDEKTD
                     CIHIGFVYSLPEVYMIMNNKGVRIPKSLR"
     gene            complement(1015..1851)
                     /locus_tag="VLA74_02225"
     CDS             complement(1015..1851)
                     /locus_tag="VLA74_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HSF49552.1"
                     /translation="MKLAFSTNAFKKYSLDFAIKEISKIGYEGVEILCDSPHAYPPEF
                     EDNKINETRKLISDLGLEISNLNAFTLYSIGDVYHPSWIESSNELRKSRINHTINCIN
                     LAEKLGAKNLSTEPGGPFNYQKPNGDRDKLLKIFVKGLLYVSKFAEKKGIKILVEPEP
                     SLLIENSIQFLELMRLVDSDYIRLNFDIGHFYCVGEDPAAIINKLVDYTEHFHFADIA
                     SNRVHYHLKPGDGSIDFVKVVEAIEKTGYKDFVTVELYPYQDNPVEVAKTAYQYLTTI
                     IR"
     gene            complement(1900..>2695)
                     /locus_tag="VLA74_02230"
     CDS             complement(1900..>2695)
                     /locus_tag="VLA74_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSF49553.1"
                     /translation="HIHMYSRTTDDYEIMSKAGIEVIVQPSFWLGSPRTSVGTFIDYW
                     EHMISFETARAKQFGIEHFVCISVNPKEAIHRPLAPDALEEMKKFLNRERVVGIGEIG
                     YNLINEFEEEIFIKQLELASSKHMLTMIHLPHENKTKGMESMEKITETKINNGQYNRD
                     QILIDHNTEDTIAKTLELGFWAGLTVYPITKLNPKRAMDIIRKYGSERIMVNSAADWG
                     ISDPLSVPLVAREMKKEGFSSKDIENVTFYNAFNFYKQSDKFTWKP"
BASE COUNT          899 a          467 c          348 g          981 t
ORIGIN      
        1 tagatagata aatactcaag actcttactc ttacgccaca gtaacaataa ggaatagaac
       61 ctaaattcat ataaaataga cactaataaa ctaacttatt ttataataat aataagaaat
      121 aaaatttgtg tacttgtaaa ataataaatt aattaattaa aataaagtaa aatttaaata
      181 tgaaattaaa aagaagagga atgaattttt ttccctttat tgaaataaat tcatattatt
      241 taaatcgatt taaatatttt gacagatttc aatatcttga ggttaactag cgtaaagatt
      301 tagggattct tactcccttg ttattcatta tcatatagac ctcaggtaaa gaataaacaa
      361 aaccaatgtg aatacaatcg gtcttttcgt ctactaagca tcttaattca ccatttttca
      421 agatcacttc tactattcta ttttttttat tgtctttaag taatacacga tcaatatcaa
      481 tagaaatttt ttccatgaat ggagcctgtt ttgcaaaagc ctcatgtttt atcatagttt
      541 cttccatcat acttgtaaga tatccagaaa agcttgttat tccttttaat tctaaatcat
      601 tctttctttt ttcatatacc ttgaataatt tgttgtaaac attttcgctc acagtaatag
      661 atttgaaacc aggctttggc atatgaaaat tccgtacatg accgtaccat ataagattta
      721 ctgacgctaa aatacttgaa ctataatcaa attatcgtca tattctgtaa tcatattgtc
      781 atctggatgg gcttaatttt tagtaaatat taaaaaagga aactattgat ttattagcat
      841 cctcattttt aacgacatca ttgcttatct attaatttag attctaagaa attataaaaa
      901 tcaatcaata aatcaatcaa taacctgtta gaatcaaaag aaagatttta tgtaaatgaa
      961 aataatttat tttttgaaat catttagtaa aactaatcta ctttcttgga agaattagcg
     1021 aatgattgtt gtcaaatatt gatacgcagt ctttgcaact tcaactggat tatcttgata
     1081 tgggtataat tcaacggtaa caaaatcttt atatcctgtt ttttctatgg cctcaacaac
     1141 tttaacaaaa tctatagaac catcgccagg tttcaaatgg taatgcactc tattacttgc
     1201 tatatctgca aaatgaaaat gttctgtata atctacgagc ttattaataa ttgcagcagg
     1261 atcttctcct acacaataaa aatgacctat atcaaaattc agtcttatat agtctgaatc
     1321 taccaatcgc atcaattcta aaaattggat ggaattctca atcagtaacg atggttccgg
     1381 ttctactaaa atctttatac cttttttttc cgcaaatttt gatacatata gcaggccctt
     1441 tacaaatatc tttaaaagtt tatctctatc tccatttggt ttttgataat tgaatggtcc
     1501 tcctggctcc gtagacaaat tttttgcacc taatttctct gctagattta tgcaatttat
     1561 ggtatgattg atccttgact ttcttaactc attactggat tcgatccagg atggatgata
     1621 gacatcgccg atggagtaca gggtaaatgc attcaggtta gaaatttcta aaccaagatc
     1681 ggaaatcaat ttacgcgttt catttatttt attatcttca aattctgggg gatatgcatg
     1741 agggctatca cacaatattt ccactccttc gtatcctatc tttgatattt cttttattgc
     1801 aaaatcaagt gaatattttt taaaagcatt agtactaaaa gctaatttca taaatttatc
     1861 tccatccgtt aaatctaggg caatatcttt tcaaacaaat tatggtttcc aagtaaattt
     1921 atccgattgt ttgtaaaaat tgaaggcatt ataaaaagta acattttcta tatctttaga
     1981 gctgaatcct tcttttttca tctctctggc tactagagga acacttaagg gatccgaaat
     2041 tccccaatcc gcagcgctat ttaccatgat gcgttcagaa ccatatttcc ttatgatatc
     2101 cattgccctt tttggattta atttagtaat gggatagaca gttaaacctg cccagaaacc
     2161 caattcgagt gtctttgcaa tagtatcctc agtattatga tctatcaaaa tctgatctcg
     2221 attatattgg ccattattaa ttttggtctc tgttatcttt tccatactct ccataccttt
     2281 tgtcttgttc tcatgtggca aatgaatcat ggtaagcata tgttttgaag atgccagttc
     2341 aagttgcttt ataaaaattt cttcttcaaa ttcattaatt agattatatc caatttctcc
     2401 tatacccaca accctttctc tattcaaaaa tttcttcatc tcttctaatg catctggtgc
     2461 aagaggtcta tgtatcgcct ctttcggatt aacagaaata caaacaaaat gctctatccc
     2521 aaattgtttt gccctagcag tttcaaaaga tatcatatgt tcccaataat caataaaggt
     2581 accaacagat gttctagggc ttcccaacca aaaagaaggc tgcacgataa cttcaattcc
     2641 tgccttggac ataatttcat aatcatcggt agttcttgaa tacatatgaa tatga
//
LOCUS       DATIAS010000112         2211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_429644, whole genome shotgun sequence.
ACCESSION   DATIAS010000112 DATIAS010000000
VERSION     DATIAS010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429644"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1111)
                     /locus_tag="VLA74_02235"
     CDS             complement(<1..1111)
                     /locus_tag="VLA74_02235"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSF49554.1"
                     /translation="MHTKSSSLQKQHTKNQDIYYIKNILEEKSLTFAEKIISVKNVET
                     DNKSKKISMSGDIVIVDVDLAMAQDSTGPLAIRSLNEMGIDKLRDPSKVLLVLDHTFP
                     AADEKVANLHALIRDFVSKHNCMLVEGSISHQHILEHLATPGMMILGADSHTCQAGCI
                     SAFATGVGSTEIAAVWATGQLWLQVPQTIKINLSGTFNKGVFARDLILDYIGKVGEDG
                     ANYKALEWKFSNDYVKQQFSMDSRACISNASMECGAKISVFPIDEITTKYLDENQTIN
                     NNRRGKIEIESGTYAKYEDEFEIECNNIEPQVSGPDNVDKVQSVDELTNVEIDQAFIG
                     SSTNGRIEDLEITAHILKGRKIHKNTRCIVTPASVK"
     gene            1212..2033
                     /locus_tag="VLA74_02240"
     CDS             1212..2033
                     /locus_tag="VLA74_02240"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49555.1"
                     /translation="MKTKGTTYGLKYDWDAKTYDRISDVIESWGHKTIERRKWKGNEI
                     VLDAGCGSGRLTKILSIKVPHGKVFAVDFDLSMIRLAKENLTKISNIQFIKMDISEIE
                     LAEKVDVVFSNAVLHWILNHKKVFEQFWQILKPDGQLLVQCGRYGNLTKTLSILNKVR
                     KSKEFYNYFCNNKGEDIWNEPWYFARKEDTEKILQEIGFRNKVFLENKEAKFHNKEEY
                     FLYIKTIVLIPYLKYLPNEMLKERFAKSIVEEIETNAKELQWKLDYVRLNIHAIK"
BASE COUNT          758 a          352 c          345 g          756 t
ORIGIN      
        1 ctttaacaga tgcaggagta actatacatc gtgtattttt gtgtattttt ctacccttta
       61 aaatatgtgc tgttatctca agatcttcta ttcttccgtt tgtagaagag cctataaatg
      121 cttgatcgat ttccacattt gtcaactcgt caacagactg tactttatca acattatctg
      181 gaccagaaac ttgaggttct atattgttac attctatctc aaattcatcc tcatacttag
      241 cataagtacc tgattcgatc tcgatttttc ctcttctatt gttgttaatt gtctgatttt
      301 catctaaata ttttgttgta atttcgtcga ttgggaatac tgagatcttg gcgccacatt
      361 ccatggatgc attgcttata caagctctgg aatccatgct gaattgttgc ttgacgtaat
      421 catttgaaaa tttccattct aacgccttgt agttagcacc gtcttcacct acttttccaa
      481 tataatctaa aattaagtct cgtgcaaaaa cgcctttatt aaaagtccca gacaagttaa
      541 tctttatggt ttgtggtact tgtaaccata actgacctgt ggcccagact gctgcaattt
      601 ccgtacttcc aactccagta gcaaaagcag atatacaacc agcttggcag gtgtgcgagt
      661 ctgctcctaa tatcatcatt ccgggagtag caagatgttc aagaatatgc tgatgagaga
      721 tagaaccctc tactaacata caattgtgtt ttgagacaaa atctcttatc aaagcatgta
      781 aatttgccac tttttcgtct gctgcaggaa aggtatgatc gagaactagc aaaacctttg
      841 agggatcacg gagcttatct atacccattt cattaagcga acgtattgcc aaaggacctg
      901 tactatcttg tgccatagca agatccacat ctacaataac aatatcacca gacatagata
      961 tttttttaga tttattatct gtttcaacat tctttacgct tattatcttt tcagcaaagg
     1021 taagtgattt ttcttcaaga atatttttga tataataaat atcttgattt tttgtatgct
     1081 gtttctgcaa tgaggatgat tttgtatgca ttcaaactcc tccttctata ttatatggtt
     1141 attcatagca tgaatttaaa taatttccta aatattataa attagatctc ttccaatata
     1201 cctaacttta tataaaaact aagggcacta cctatggttt gaaatatgac tgggatgcta
     1261 aaacatatga tcgtatctcg gatgtaatag aatcgtgggg acataagaca atagaacgta
     1321 gaaaatggaa aggaaatgaa atagttcttg atgctggttg tggttctgga agattaacca
     1381 agatattatc aattaaagtt ccacatggga aagtttttgc agtagatttt gatttgtcta
     1441 tgataagact tgctaaagaa aacttaacaa agatttctaa tattcaattt atcaaaatgg
     1501 atatctctga aatagaactt gcagaaaaag tagatgttgt attttcaaat gcggtattac
     1561 attggatttt aaatcataaa aaagtgtttg aacagttctg gcaaattcta aaacctgatg
     1621 gtcaactatt agttcaatgt ggccgatatg gaaatcttac aaagactcta tccatactca
     1681 ataaagttcg aaagtcaaag gaattttata attatttttg taacaataaa ggagaggata
     1741 tctggaatga accatggtat tttgccagaa aagaggatac agaaaaaata ttacaagaaa
     1801 taggctttag aaataaagtc tttctggaaa ataaagaagc taaattccat aacaaagaag
     1861 aatactttct ttacataaaa acaattgttc taataccata tctaaaatat ttaccaaatg
     1921 agatgttaaa agaaaggttt gctaaatcaa tagtagagga aattgaaact aatgcaaaag
     1981 aattacaatg gaaattagat tacgttagat taaacattca tgcaataaaa taaatatgta
     2041 tattaagttt aaaaattata catttttaaa agtgagacca aaatttatat caaatttgtt
     2101 tgacatccca ctgataaaga tacaaaatgt aattaatcct tgaatctttt gttggatcat
     2161 ttagttatca taatattcta atattatatt aaaatttact gaacctattt c
//
LOCUS       DATIAS010000113         8368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1655728, whole genome shotgun sequence.
ACCESSION   DATIAS010000113 DATIAS010000000
VERSION     DATIAS010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8368
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1655728"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VLA74_02245"
     CDS             <1..514
                     /locus_tag="VLA74_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49556.1"
                     /translation="MNHGYIDSIDSVIDKRAKIYYPLIETKKYINLFYSQEKNNSSQE
                     ITKIVVNSTRFPDQVYILSVLEPILKYYSTEGYIIKIKNSKDEEISLNELVEQYFGNP
                     QDYFEVKIEESEQQQPPQKEESEQQQQPPQKEESEQQQLPQKEESTIISNETPEEKYL
                     REQEEMKKWG"
     gene            1055..1528
                     /locus_tag="VLA74_02250"
     CDS             1055..1528
                     /locus_tag="VLA74_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49557.1"
                     /translation="MISKQQFEAQLQQIFRLLLENKTQEEIAHELNISIRTVARYSQR
                     IDKRYGEVQRQKTDDTLFLECHLFKNRMLNLYKILEEKAASSPNNTNGHEIAKCCEVA
                     ANIAIDVLKMESEGIKAVKELLGAEREAAAAITNNSDSSSRDLDMMMDDESEESC"
     gene            complement(1623..2819)
                     /locus_tag="VLA74_02255"
     CDS             complement(1623..2819)
                     /locus_tag="VLA74_02255"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSF49558.1"
                     /translation="MATIEFKTIPIDEIIEPEWDIRKDMRDDYYSDNSDLNGLVQSIK
                     KDGVIQPIIVSKIGIDKYQIIAGRRRFKACKILKLKEIPAGIKLTNTYDKNDKQRIAL
                     IENLHRKDLSDIEKADGILSVYTNAGYQSEDVVRFIKYLENNGYQPGKTDRSLILGNN
                     SLTKSNIKSKREHIVLDEQFLDIVDSIGYSPNTQYKYLQIAVKLDPSILKEAEEKGLS
                     INKKIMLTNTKLREFPELERILIDKIANQSDQAARTIISETVRLIENDKVTKEKLLEL
                     ERKIKELEQSEDPWHITMSEDLEGILRSLETKEFLKKANTNREYQDLKASLLKQKTEK
                     GYPLQLVKRSFSPNNELINVYEGLYVAKDIIYPIIFTCNLRKKDASTVIDEVKKEKIE
                     QQFNLR"
     gene            3225..4256
                     /locus_tag="VLA74_02260"
     CDS             3225..4256
                     /locus_tag="VLA74_02260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49559.1"
                     /translation="MTLIYFFIAIQFVYAQTVENEIIENTLESVENVTADISEIITES
                     LTNTSESTDSNITSDTSKKQNQSEFKIYESKIIGVKFKMPSTWDIFLEGNNTKNCFDV
                     KVDKIFISSYNECGVRLADDNIFSHPGFWVQITKHSTSNYSLADFLTHLYESIKHSEG
                     FSFINDKEMTIQNHPAWQIEYRVEGEKQMVIVTKVNNTFYDLLYYPTYSYLYYKYLQE
                     VENFVKSIEFIPSIEPKPLFLKYSTLKNTYAQTTTTNKITDLLFEKYYPIVKVAYESD
                     SMVVLEAKENYLLEINGSFVPFWESIDRVKNQGYSLKEIITSGTGSIENPIIFYAIFF
                     NNSNNKIEN"
     gene            4263..4982
                     /locus_tag="VLA74_02265"
     CDS             4263..4982
                     /locus_tag="VLA74_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49560.1"
                     /translation="MMTHNSKKRMLVLSKNIIISVLLLTAILFIFLFSIIGNDILITV
                     YSSIENTTQTLTMSNPDITSNFTNVQWKKFVNETIGISLEYPSHWEGGGTGREGYYHI
                     SPKTEGYLEGVLPLAIPLATNFDFSYGEPPFDNLEVLTRVFAVNILDHSSDYIDYEII
                     EKPNMEKYTIDGEKASTFSYKKIHEVTGLPDLIINVEVINVIYNGKFFTFEFEYPINK
                     FDEEYITKIKDHMFNSIRWLN"
     gene            complement(5182..5334)
                     /locus_tag="VLA74_02270"
     CDS             complement(5182..5334)
                     /locus_tag="VLA74_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49561.1"
                     /translation="MKESEIEAGFMRYTLLLDAGSDLLKMTGIITNITKRSFTNKFLK
                     KLINSL"
     gene            5398..6018
                     /locus_tag="VLA74_02275"
     CDS             5398..6018
                     /locus_tag="VLA74_02275"
                     /inference="COORDINATES: protein motif:HMM:NF025825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HSF49562.1"
                     /translation="MAISFGRKDSNENKIQSEAIPDQNIYQEQIPNRQKFNDKEIEEI
                     QRVSKRLDSDEEVEIVAKQSKLRPGGSKTTPDTIFVTNKRLLIRDPSFFGAPEDFESI
                     TYDKITSIELEKGMFSSAVKIMASGYKGNIDAISKEKAERIVEYIKKSMQNIKTEKEK
                     QVSIGINSNQKLSIADELLKLAKLKEEGIITEQEFNQMKQNLIKNK"
     gene            6143..6409
                     /locus_tag="VLA74_02280"
     CDS             6143..6409
                     /locus_tag="VLA74_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HSF49563.1"
                     /translation="MKARNLITLKSTIILLLGISSIAFFSDIPTIDATTEDNSDDCDS
                     SYPDTCIPSPPNLNCKDISEKRFEVEPPDPHGFDRDGDGIGCES"
     gene            6658..6897
                     /locus_tag="VLA74_02285"
     CDS             6658..6897
                     /locus_tag="VLA74_02285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49564.1"
                     /translation="MSLSSLSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSFS
                     SFLSFSISFPSVLKKGKFSFSLLVYLGFSIIGIFS"
     gene            complement(6861..7532)
                     /locus_tag="VLA74_02290"
     CDS             complement(6861..7532)
                     /locus_tag="VLA74_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49565.1"
                     /translation="MIKNISNFIIIVVVALSISIIFSLATITTIETTYANHTKYHLNN
                     SLVDVTISSDDDIPDALLEDIKRGIIRDMKAEEKKAFEKNNNISQLQTTEKTTDTTKA
                     KIILTSHKYAETPDDDSYDELFGQVKNVGNGTAEDVSIIFTYYDINSNAIGNDDTGIY
                     ADILHPGQKSPFQEWRNVEKTPDMAYYEIALSWYNSDGTQEYIENVEVIKDPQEKIPI
                     IENPK"
     gene            complement(7529..8083)
                     /locus_tag="VLA74_02295"
     CDS             complement(7529..8083)
                     /locus_tag="VLA74_02295"
                     /inference="COORDINATES: protein motif:HMM:NF038353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxLYD domain-containing protein"
                     /protein_id="HSF49566.1"
                     /translation="MRRDFIYSFFLLFVLSTTSIFFLLSQSQFNAFAIFTVDRNNGNE
                     DSSDSIAKIILTKIKYRSDRFSDDITGQVMNVGNGTAESIRVIFTYYDKRGNVIGSDY
                     THTNQDLLKPGQKSPFSQMVDEETGDDMEAYEVSLSWENPNGSEEYVENVQVEDENNF
                     IINLKENLPILTEEEIEKLGLFER"
BASE COUNT         3045 a         1180 c         1140 g         3003 t
ORIGIN      
        1 aatgaaccat ggttacatag atagtattga tagtgttatc gataaaagag caaagatata
       61 ttaccctctt atagaaacga aaaaatatat taatttattc tattcacaag aaaagaataa
      121 ttcttcacaa gaaataacga aaattgttgt aaattctaca agatttcccg atcaagtata
      181 tatactttct gttttagaac cgattttaaa atattattct acggaaggat atattataaa
      241 aataaaaaat tcaaaagacg aagagataag tctaaacgag ttagtagaac agtattttgg
      301 taatcctcag gattattttg aagtgaagat agaagaatcg gaacaacaac aaccaccaca
      361 aaaagaagaa tcggaacaac aacaacaacc accacaaaaa gaagaatcgg aacaacaaca
      421 actcccacaa aaagaagaat caacaataat atcaaatgaa actcctgaag aaaaatacct
      481 gagggaacag gaggaaatga aaaaatgggg ataatagact tgattaatcg ctaatatatt
      541 ttaaaaaata atttttctaa aaaataaggg ggatagaata atatttttta gagggtcaaa
      601 ttgtagagaa attacaacaa aaataaagac catatatata aacattataa aaattacaat
      661 aaattcttaa aaacagtgta aaaaattatt ctatttagtc aaaaagaata aaagaatata
      721 ttttgattat attcatggat atagaaaaat agattttaga aaaaatagta aaggttactt
      781 ttttcagagc atttttctga ataatgttcg agaagaaatt gacggggtct tgcttttcaa
      841 tagaaaaggc aaaggatgtc cgatagagag gtgatagttt gactatcaaa ttcaatgtat
      901 ttaatgatag acaaagagca attgttgaat gtatcagaat gtggcttagt gttaaacaat
      961 ctcttgaaat tctaaattta ttatttattt ttatacgtct tatttattta cgtgaatgtg
     1021 tcataatgtg tcaggtttta gtgatttata aaagatgata agcaagcaac aatttgaggc
     1081 tcaactacaa caaatatttc gattacttct cgagaacaag acacaagaag aaattgctca
     1141 tgaattaaat atttctataa gaactgtagc cagatattca caacgaatag acaaacgtta
     1201 tggtgaagta caaagacaaa agacagatga tacattgttt ttggaatgtc accttttcaa
     1261 gaacaggatg ttaaatttat acaaaatttt ggaagaaaag gcagcatcat caccaaataa
     1321 tacaaacgga catgagatcg ctaaatgctg tgaagtagca gccaacattg ctatagatgt
     1381 tttgaaaatg gaaagcgaag gtatcaaagc agttaaagag ttactaggag cagaaagaga
     1441 agcagcagca gcaatcacca ataatagcga cagcagcagc agagacttag acatgatgat
     1501 ggacgacgaa tcagaggaaa gttgctgatg atgattattt tatttctata ataactaata
     1561 acaaaaaatt actacatcca taatagtaga tttaaaatta atagtatact gaagagttga
     1621 actcatctta gattaaactg ttgctctatt ttctctttct taacctcatc aattactgtt
     1681 gaagcatctt ttttccttag attgcaagta aaaataattg gatatatgat atcttttgct
     1741 acatatagcc cttcatatac attaattaac tcattattag gtgaaaagga tctctttact
     1801 aattgtagtg gatatccttt ttcggttttt tgtttcaaga gtgaagcctt cagatcctga
     1861 tactctctat ttgtatttgc ctttttcaaa aattcttttg tttctagaga tcttaagatt
     1921 ccttccaaat cttccgacat agttatatgc catggatcct cactttgttc aagttctttt
     1981 atctttcttt caagttctaa taatttctct tttgttactt tatcattttc tattagtctt
     2041 acagtttctg aaataattgt tctagcagcc tggtctgatt gattagcaat tttgtctatt
     2101 aaaattcttt caagttctgg aaattctctt aactttgtat tggtaagcat tattttttta
     2161 ttgatactga gccctttttc ttcagcctct tttaatattg agggatcaag tttaactgca
     2221 atttgaagat atttgtattg ggtatttgga gaatagccga ttgaatctac gatatctaaa
     2281 aattgttcat ctaagacgat gtgctccctt ttggatttta tatttgattt agttagggaa
     2341 ttattcccta aaattagact tctatctgtt tttcctggct gatagccatt attttctaaa
     2401 tattttataa atcgaacaac atcctctgat tggtatccag cgttagtata aactgataaa
     2461 ataccatctg ctttctcgat atcagataaa tctttgcgat gtaaattttc aataagtgct
     2521 atcctttgtt tatcattttt atcataagta ttagttaatt taatacctgc tggaatttcc
     2581 tttaacttga gtattttaca tgctttgaat cttctacgac ctgcaataat ttgatattta
     2641 tcaattccaa tttttgatac aattataggc tgaattactc catctttttt aatagattgg
     2701 actaagccat ttaagtcact attatctgaa tagtaatcat ctctcatgtc ttttctaata
     2761 tcccactccg gttcaatgat ttcatcgatt ggaatagttt taaattctat tgtagccatt
     2821 ttcttattgt tgtacctagg aaaattaact tataaaatta atcctttcta ttgacttttg
     2881 ttattcttta aatccctttt caacttttat ttttaataga ttcttcattt ttttggcaat
     2941 ttcctgttga aattaccaat agatcaattt gtattatcaa gggaaaaatg tcatcattct
     3001 tattttatat tgttctaata acaaagacat tatcaataat tctgttgaaa attgttctct
     3061 cttagtattt attgcatttg aatatttgta tgaagattgt aacatttgat taaacattga
     3121 agtttatcag taaaataata ataccttaaa ttataaataa atagataaat aagattaatt
     3181 aaaatttgaa tatgataaaa aatattttat ttattatttc atttttgacc cttatctact
     3241 tttttatagc aatacaattt gtatatgctc agacagtaga gaacgaaatt atagaaaata
     3301 ctttagaaag tgtagaaaat gttactgccg atatttcaga aataataaca gaatctttga
     3361 ctaatacttc agaatcaaca gatagcaata tcacatctga cacatctaaa aaacaaaacc
     3421 aaagtgagtt taaaatatat gaatcaaaaa tcattggagt taaattcaaa atgccatcaa
     3481 catgggacat ttttctagaa ggtaataata ctaaaaattg ttttgacgta aaagttgaca
     3541 aaatttttat atcttcgtat aatgaatgtg gggttagatt agcggatgat aatatattct
     3601 ctcatcctgg tttttgggtt caaataacaa agcattcgac atccaattat tcattggcag
     3661 attttcttac acacctatat gaatcgatca agcatagcga gggtttttct ttcataaatg
     3721 ataaagaaat gacgatacaa aatcatccag catggcagat agaatatagg gtagaaggtg
     3781 agaagcaaat ggttatagtc acgaaagtta ataatacatt ctacgactta ctttattacc
     3841 caacatattc atatctttat tataaatacc ttcaagaagt cgagaatttt gtcaagtcaa
     3901 tagaatttat tccttctata gaacccaagc ctctattctt gaaatattca actctaaaaa
     3961 atacatatgc tcaaacaact acaactaaca aaataacaga tttattattt gaaaagtatt
     4021 atccaatcgt taaagtagcc tatgaaagtg actctatggt agtattagaa gcaaaagaga
     4081 actatctttt agaaataaat ggaagttttg tccctttttg ggaatctata gacagagtca
     4141 aaaatcaagg atattcatta aaggaaatta taacttcagg aacaggaagt atagaaaatc
     4201 caataatatt ttatgcaata ttttttaata attccaacaa caagatagaa aattaaatag
     4261 atatgatgac tcataatagt aaaaaaagaa tgttggtttt atcaaaaaat ataataatat
     4321 ctgttttatt acttacggct attttattta tttttttatt ttcaattata ggtaatgata
     4381 tactaataac agtttattct tctattgaaa atactactca aacactcaca atgtcaaatc
     4441 ccgatataac atcaaatttt actaatgttc aatggaaaaa atttgttaat gagacaattg
     4501 gtattagttt agaatatcca tcacattggg aggggggagg aacaggaaga gaaggttatt
     4561 atcatatttc tcctaaaacg gaaggttatc tagagggagt attacccttg gcaataccct
     4621 tggcaactaa ctttgatttt tcttatgggg aacctccttt tgataattta gaggttttaa
     4681 ctagagtatt tgctgtgaat attcttgatc attcttctga ttatatagac tatgaaataa
     4741 ttgagaagcc taatatggaa aaatatacaa ttgatggaga aaaagcaagt acattttctt
     4801 ataaaaaaat acatgaggtt acgggactac ctgatttaat aattaatgta gaagtaataa
     4861 atgtcatata caatggaaag ttttttacct ttgaatttga atatccaata aataaatttg
     4921 atgaagaata tataactaaa attaaagatc atatgtttaa ttcaatcaga tggctaaact
     4981 aaacacaatt gaatcaaaat ttgtaaatat atttttgtta ttattaattt gattccaata
     5041 ccaaatacat agacgtattc ttttcttatt gaatcattat tagggatcta taaattttca
     5101 aagtattgta ataggcttca caaaaaagag attaattaaa aaaagaacat tctaatggtt
     5161 ttttttatta ctattattca tctaaagaga atttattaat ttcttcagaa atttattggt
     5221 aaaactcctt tttgttatgt ttgttattat tcctgtcatc tttagtaaat cagatccagc
     5281 atctaataac aatgtataac gcatgaaacc tgcttcaatt tcagattctt tcattttaaa
     5341 tttatttagt gattaatatc cgataactta ataaatttat agtatattag atattttatg
     5401 gctatcagtt ttggcagaaa ggatagtaat gaaaataaaa ttcaatcgga agcaattcca
     5461 gatcaaaata tctatcaaga acaaatacca aatagacaaa aatttaacga taaagaaata
     5521 gaagaaattc aaagagtttc aaagagatta gactcagatg aggaagttga aattgttgca
     5581 aaacaatcca aattaagacc aggaggttct aagactacac cagataccat ttttgtaaca
     5641 aataagcgat tattaattcg ggatccttca ttctttggag caccagaaga tttcgaatcc
     5701 attacatatg ataaaattac atctattgaa ttagaaaagg gtatgttctc ttctgcagta
     5761 aagattatgg cttcaggcta taaaggaaat atcgatgcta tttcaaaaga aaaggctgaa
     5821 agaatagttg aatatatcaa aaaatctatg cagaatatta aaacggaaaa agaaaaacaa
     5881 gtttctatag gtattaattc aaatcaaaaa ttatcaatcg cagatgaatt actaaaactt
     5941 gcaaaactga aagaagaagg aataataact gaacaagagt ttaatcaaat gaaacaaaat
     6001 ttaattaaga ataaatgaaa tggtgaaaat tttcttaatt cttagattta ttagataaca
     6061 attctttgtt atttatcagt attaatttca gtttcttata ataatctttt attttaccat
     6121 gaatttataa tggcaagaaa gaatgaaagc cagaaattta attactttaa aatcgacaat
     6181 tatattatta cttggtatat catcaattgc tttcttttct gacataccaa caatagatgc
     6241 aacaacagaa gacaatagtg atgattgtga ttcttcatat cctgatacat gcataccatc
     6301 tcctccaaat ctcaattgta aagatatatc agagaagcgt ttcgaagttg agccaccaga
     6361 ccctcatgga tttgatcgtg atggagatgg aataggttgt gaatcctaat taatgagaag
     6421 gaattaacaa tttttaataa tattctgtta actataactt tatattttta taattgttat
     6481 ttaaatcata ttttttgcta gttgattatt caaaagatat aaaaaaatat gcatctaaac
     6541 tttttattat aacaggagat ttctttctaa atgattcctc tatattgaaa aagaagaaaa
     6601 agattgatta tatcctcata acaaatgatt gatacaatga aaaaggatta ctaattgttg
     6661 tctttatcat cactgtcttc atcttcatcc tcatcttctt catcctcatc ttcttcatcc
     6721 tcatcttctt catcctcatc ttcttcatca tcatcttctt catcatcatc gtcatcatct
     6781 tcattctcct cattccttag tttttctata tcatttccat ctgtattaaa gaaaggaaag
     6841 ttttcatttt cattattagt ctacttagga ttttcaataa ttggtatttt ttcttgagga
     6901 tctttaataa cctcaacatt ttcaatatat tcttgtgttc catcggaatt ataccatgat
     6961 aatgctattt cgtaatatgc catatcaggt gttttttcta cgtttctcca ctcttggaaa
     7021 ggagattttt gaccaggatg taatatgtcc gcatatatcc cggtatcgtc atttcctatt
     7081 gcattactat taatatcata atatgtaaag atgattgata catcttcagc agttccattt
     7141 cctacatttt tcacttgacc aaataattca tcgtaactgt catcatctgg cgtttcagca
     7201 tatttgtgac ttgttaaaat tatttttgct tttgtagtat ctgtagtttt ttctgttgtt
     7261 tgtaattgtg aaatattatt attcttttca aatgcttttt tttcttctgc tttcatgtcc
     7321 ctaataatac ctctttttat gtcttctaat aatgcatctg gaatatcatc atcgctagat
     7381 attgtaacat ccactaaaga attgttaaga tgatatttag tatgatttgc atatgttgtt
     7441 tctattgtag taattgtggc taaagaaaat attatactaa tagataatgc tactactact
     7501 attattataa aattactaat attttttatc atctttcaaa taatcccagt ttctcaattt
     7561 cctcttcagt tagtattggt aaattttctt ttaaatttat tataaaatta ttttcatctt
     7621 ctacttgtac attttcaaca tattcttcag aaccattagg attttcccaa gataatgata
     7681 cttcatatgc ttccatatca tcaccagttt cttcatcgac catttggcta aatggtgatt
     7741 tttgaccagg cttaagcaga tcttgatttg tatgtgtata atctgagcca atcacattac
     7801 ctcttttgtc ataataggtg aagataactc gtatactttc tgcagttcca tttcctacat
     7861 tcatgacttg accagtaata tcatctgaaa acctatcact tctatatttt attttagtaa
     7921 gtattatttt ggcaatagaa tcagaagaat cttcattacc attatttcta tctacagtaa
     7981 atatagcaaa tgcgttgaac tggctttgac ttaataaaaa gaatatactc gtagttgata
     8041 atacaaataa taaaaaaaag gaataaataa aatcccttct catattataa ataaggaatt
     8101 taaagttatt tatataataa cataagtttt tgataaattt taatgaaaat atcgtgatta
     8161 gaactgtcaa ttgttctaat aacgttatta ttttcactga ctaaccacta aaataacaaa
     8221 tataaaaata tataccactt agcatatgtt agctgacacc ttctaacaag tagttcctca
     8281 tatcaagatg gaatcttttt gttctaaaat atttacataa tttatttgtg aaatctgtaa
     8341 acgatgaata aaattgtagg accagcag
//
LOCUS       DATIAS010000114         2950 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1655947, whole genome shotgun sequence.
ACCESSION   DATIAS010000114 DATIAS010000000
VERSION     DATIAS010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2950
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1655947"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1187)
                     /locus_tag="VLA74_02300"
     CDS             complement(<1..1187)
                     /locus_tag="VLA74_02300"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF49567.1"
                     /translation="MIQKKIFVVRDVLFSNFVIIFFLFLFFLYPQFSFSETVNNKNQS
                     SIESIPFTFIGIESNKTVNPVLLEQSKDFNPARVIEVTPGVYTAIGYGPSNIIMVEGT
                     DGVIMIDSGSSVEQAQMVLSEFRKITDKPVSALIYTNGKADHVGGGGVFVNDSKTQGQ
                     LPDIIANIEFAENVFPSIGQIAKQKSIYDLYWSGLLLPSSGNESDSSISSGLGPNWKL
                     GNISYVTPNILFNDTLETTYSGINITLISAPGPSPEQIFVWIPEKEVILSSDLVYEAF
                     PNLYSMSGLEDVDIQSWIDAIDIMRELNSTFLVPSHLSPARGSENVSDILISYRDAIS
                     YLVQQTIRYINQGYNAEEITEILELPSYLKDHPWLQERTGQLSWMIRQIYSYIVGWNS
                     GDAT"
     gene            1408..2421
                     /locus_tag="VLA74_02305"
     CDS             1408..2421
                     /locus_tag="VLA74_02305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49568.1"
                     /translation="MLISILGIIFSNLDIPTVDAKKFSKIKSKNSKSDFKKSKSKISK
                     SDFKKYDNNKIKKDKKFKPSSISQGSFLTSFKPVNIKNLDKDKFRNIADKDKLDKFPR
                     ISQLPHFPDCGKHGTCIDRGGINIEDGINIDVDNVDVDWDDIQWDDIDWNDIDVDIDD
                     DIDVDIDDEDIDIVVRDDDDDDDDDDDDENNTYIYNYRYPEETYQELYVNEYDENYIQ
                     QYTTPEQSYVTSEVQRIVNEGSFKIHLVESGNPLTPVDNTGYVLLGANQGTNNELEIS
                     NGSNGQIIILTGADDTRPIKISSTENIKLELNEIILGKNDALILAYLDESSSWVQIAS
                     KIV"
     gene            2576..>2950
                     /locus_tag="VLA74_02310"
     CDS             2576..>2950
                     /locus_tag="VLA74_02310"
                     /inference="COORDINATES: protein motif:HMM:NF025113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF49569.1"
                     /translation="MSKRNWSVYNESLIERGRILMDIGFIKSQRRELAKMNRKKVGRP
                     FLYPNSYVEFLAFLKIGFSISYRTVQGIIRGLIEYIKVDEINFTQLRRRIRKMCTKVK
                     NIINNNNNNNNNNNNNNNIKDKS"
BASE COUNT         1118 a          423 c          473 g          936 t
ORIGIN      
        1 gtagcatcac cagaattcca acctacaata taactatata tttgtctgat catccaagac
       61 agctgaccag ttctttcttg caaccaagga tggtctttta aataagaagg aagctctaat
      121 atttcagtta tctcttctgc attataacct tgattaatat atctaatagt ttgctgaact
      181 aaatacgata tcgcatctct gtaagagatc aaaatatccg aaacattctc tgaacctctt
      241 gcaggtgata agtgactagg tactagaaat gtagaattca attctctcat aatatcaatt
      301 gcatcaatcc atgattgtat atcaacatct tctaaaccgg acatagaata gagatttgga
      361 aatgcttcat atacaagatc acttgataaa atgacttctt tttctggtat ccagacaaaa
      421 atctgctcag gtgaaggtcc tggtgctgaa ataagagtaa tgtttattcc tgaatatgtc
      481 gtttcaagtg tatcgttgaa caggatattt ggagtgacat atgatatatt tcctaatttc
      541 cagtttggtc caagtccact acttatcgag ctatcactct cattacctga tgagggaagt
      601 aacaatccac tccaataaag atcataaatg gatttctgtt ttgcaatttg tcctatggat
      661 ggaaaaacat tttcagcaaa ttcaatattt gctataatat caggaagttg tccttgtgtc
      721 ttgctatcat taacaaatac tccacctccg cctacatgat ctgctttccc attcgtatag
      781 ataagagcag aaacaggctt gtcagtaatt ttccgaaatt cagaaagtac catttgggct
      841 tgttctacag atgaaccact atctatcatt atcacaccat ctgttccttc taccataata
      901 atgttggatg gaccataccc tatagctgta taaactcctg gtgtaacttc aattaccctt
      961 gctgggttga aatcttttga ttgttccaat agaacgggat tcactgtttt attactttca
     1021 atcccaatga atgtaaatgg aatagactct atagacgatt gattcttgtt attgacggtt
     1081 tctgagaaag aaaactgtgg atacagaaag aataaaaaaa ggaaaaatat aattacaaaa
     1141 tttgagaaca aaacatctcg aactacaaat attttctttt gaatcataaa ctatatgata
     1201 aatcaggatc tttataatat aatataaatt ctttgtaaat attcaacatc caaacgtagt
     1261 agaaaggaaa ttaaaaatga aagagaatat aaataaagta taaaatacta attagaaaaa
     1321 agttttccaa aagaattaaa aaaaggtata gcatttaaag gtaatagaat agcactgatc
     1381 accaaattta atttcatatt cgggatattg ttgatttcca ttttaggcat cattttttct
     1441 aatcttgata ttcctacagt cgatgcaaaa aaattttcaa aaattaaatc aaagaacagc
     1501 aagtcagatt ttaagaaatc taaaagcaag atatccaagt cagattttaa gaaatacgat
     1561 aataataaaa tcaaaaagga taaaaagttc aagccaagca gtatttctca aggttctttc
     1621 ttaacttcct tcaagcccgt aaatattaag aatttggata aggataaatt taggaatata
     1681 gcggataaag ataaactcga taaatttcca agaatttcac aattaccaca ttttcctgat
     1741 tgcggaaaac atgggacatg tatagacaga ggtgggatca acatagaaga tggaattaac
     1801 attgatgtag ataatgtaga tgtagactgg gatgatatac agtgggatga tatagactgg
     1861 aatgatattg atgttgacat tgatgatgat attgatgttg acattgatga tgaggatata
     1921 gatatagtag ttagagatga tgatgacgat gatgacgatg atgacgatga tgaaaataat
     1981 acatatatct ataattatag atatcctgaa gaaacttatc aagaattata tgtaaatgaa
     2041 tatgatgaaa attatattca acaatataca actcctgaac aatcttatgt tacatcagag
     2101 gttcagagaa tagtcaatga agggtcattt aaaattcatt tagtggaatc tggaaaccct
     2161 ttgactccag tagacaatac gggatatgtt cttttgggag ctaaccaagg aacaaataat
     2221 gaacttgaaa tatcaaatgg ttctaatggg caaattatta tacttactgg ggctgatgat
     2281 accaggccta ttaagatatc aagtactgaa aatataaaac tcgagctaaa tgaaataata
     2341 ctgggtaaaa acgatgcatt aatccttgca tacctcgatg aatcatcttc atgggttcag
     2401 atagcatcta aaattgtata gaatgatata aaaaatagaa atggtgtagt aatttcagtt
     2461 tcaaaggaaa aaaatttctt aaaagttaat ttttaaattt tatttattat tgttacaatg
     2521 ttatagtata tcttagtttg tagcattatt atcctacaat cttattattt ttctaatgtc
     2581 taaaagaaac tggtctgtat ataatgaatc ccttatagaa cgtggacgta ttctaatgga
     2641 tatcggattt attaaatcac aaagaagaga actagcaaaa atgaacagaa agaaagttgg
     2701 tagaccattt ctatatccta atagttatgt agaatttcta gcatttctga aaattggatt
     2761 ttctatttca tatagaacag tacaaggcat tataagagga ttgatagaat atatcaaagt
     2821 agatgaaata aattttactc aattgagaag acgtatcagg aaaatgtgta caaaagtaaa
     2881 gaatattatt aacaacaata acaataacaa taataataat aataataata ataacatcaa
     2941 agacaagtct
//
LOCUS       DATIAS010000115         2018 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_975777, whole genome shotgun sequence.
ACCESSION   DATIAS010000115 DATIAS010000000
VERSION     DATIAS010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_975777"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            483..>2018
                     /locus_tag="VLA74_02315"
     CDS             483..>2018
                     /locus_tag="VLA74_02315"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF49570.1"
                     /translation="MNINKGNILIVILSLPLAFFSCYNIYAQQQNYSLSVENITLYDP
                     NLKIELVTSGLDFPTTMEFLGPDDFLILEKNTGNVKRVVNGTVIEKPLLHVDASIKDE
                     RGLLGIAVSKKKDFYDNTFFIENKKLTHNIFLYYVECNEKNLNCENRVYRYDLNNQKN
                     ELVNPKLLVGVPSFPDPSHIGGIIRIGPDENLYVTVGNFQNTIPSKVYKTKTQNFEDG
                     EPVDGRAGILRITQEGTLVENDDGGYNGILGDDYPLNLYYAYGIRNSFGLDFDPITGK
                     LWDTENGPQFGDEINLVEPGFNSGADKIYGIWESNEFGDRIKNKKGKYVTVTEHNPED
                     LVYFDGKGRYSPPEFIWGKTVAPTGLSFLDSDRLGSAYKNDIFVGSADGGRIFHFDLN
                     ENRTGLDLKGNLTDRIALNNTEYGDILFAEGFSIITDVKQGPDGYLYVVSGLKQSKTE
                     KFGAVFRFVPTENSNNNNSNNTKHDNIILHTQEKEKSSSNIFNKTIDTNSMTNKSENI
                     PKKM"
BASE COUNT          756 a          246 c          365 g          651 t
ORIGIN      
        1 tgactttgtg acaatgtggg gatcacttgg atgtaaagat gatcagttcc taattcctca
       61 tgatatagca atggactcta aaggctatat ctatgttaca gatagtggaa aatcacattt
      121 tagagctgat tacaattgtg atcaaggaag ttagtgatat tactaaaata gaaaaaatta
      181 tttaaagtga attagtacga gatctttttt aacatcaagg ttcaattaac tgaaagcaat
      241 aataaattga tactactagg cccaaattga tataacggtt ttttaatatt gagattaagc
      301 aaatctgaag taagtaaatc ttctaacttt ttttctattc tatgatattt gtaaaaaaac
      361 tttatagcaa ttaaaaataa aaagaagaaa tatattgtaa gaattgtttt tttgtattaa
      421 attatataat gttttatttg tacgttaaaa tatcttcgat tctattctca attaagagaa
      481 taatgaatat aaataaagga aatatattaa tagtaatttt atctttacca cttgcgtttt
      541 ttagttgtta taatatttat gcacaacagc aaaattattc gctatctgta gaaaatatta
      601 cactttatga tcctaatttg aaaatcgaat tagtgacatc tggacttgac tttcctacta
      661 ccatggaatt tttaggtcca gatgattttt taatacttga aaaaaatact ggcaatgtga
      721 aaagagtagt aaatggaact gtcattgaaa aaccactttt acatgttgat gcaagtataa
      781 aagacgaacg tggtttgcta ggaattgctg ttagcaagaa gaaagatttt tatgataaca
      841 ctttttttat agaaaataaa aagctaacac ataatatctt tctatactat gttgaatgta
      901 atgagaaaaa tctgaattgt gagaatcgtg tttatagata tgacctgaat aatcaaaaga
      961 atgaacttgt aaatccaaag ttattggtgg gtgtaccttc atttcctgat ccttctcata
     1021 ttggcgggat aataagaata ggtcctgatg aaaatcttta tgttaccgta gggaatttcc
     1081 aaaatactat tccatcaaag gtatacaaaa ccaagacaca gaattttgag gatggtgaac
     1141 ccgtagatgg aagagctgga attttaagga taacacaaga ggggacatta gttgagaatg
     1201 atgatggtgg ttataatggc atattaggag acgattatcc tcttaaccta tactatgctt
     1261 atgggataag aaatagtttt ggattagatt ttgatcctat aacaggaaag ttatgggata
     1321 ctgaaaatgg acctcaattt ggtgatgaaa ttaacttggt agaacctggc tttaatagtg
     1381 gtgctgataa gatatatggc atttgggaat ctaatgaatt tggagataga ataaagaaca
     1441 agaaaggtaa atatgtgact gtcacagaac acaatccaga agatctagtt tattttgatg
     1501 gaaagggacg ttatagccct ccagaattca tatggggtaa aacagtagct ccaactggat
     1561 tatcatttct tgattccgac agattgggtt ctgcatataa aaatgacata tttgttggat
     1621 ctgcagatgg aggaagaatt tttcatttcg atctaaatga aaataggact ggattggatt
     1681 taaaaggtaa tttaacagat cgaatagcat taaataatac agaatatggt gatatattat
     1741 ttgccgaagg ttttagtatt attacagacg tgaaacaagg tccagacggt tatctctatg
     1801 ttgtttcagg cctaaagcag tcaaaaacag aaaagtttgg ggcagttttt aggtttgtac
     1861 ctactgaaaa tagtaataac aacaacagca acaatacaaa acatgataac ataattctac
     1921 atacacaaga gaaggaaaaa agtagtagta atatattcaa caagactatt gatactaatt
     1981 caatgacaaa caagtcagaa aatattccta aaaaaatg
//
LOCUS       DATIAS010000116         2506 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1248337, whole genome shotgun sequence.
ACCESSION   DATIAS010000116 DATIAS010000000
VERSION     DATIAS010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248337"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(597..1307)
                     /locus_tag="VLA74_02320"
     CDS             complement(597..1307)
                     /locus_tag="VLA74_02320"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSF49571.1"
                     /translation="MIDNNIIYPALKKQYFVIAAIIVIVPLFLFSSIEFSGYNNNLSL
                     VKNAVAQPDSTNNNNVYNTQSNISNQSSSTSTATTTTNATSRNDTAPFVVDIISLAKQ
                     NNNFREEIKTAGHTQVVLMSLKPGEDIGLEVHKKIDQLLMFVQGTGEGNINGQKIPIK
                     EGSFAFVPAGTPHNFVNTGNTDLKLFTTYSPPNHYAGTLQKTKAETAGYVPPGAIEVE
                     DGEIEEEEYEEEEEYEDD"
     gene            1482..1658
                     /locus_tag="VLA74_02325"
     CDS             1482..1658
                     /locus_tag="VLA74_02325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49572.1"
                     /translation="MERNHIQILSFVIIISFIIIISSSILFLSFSQLSFAQKEDDNKN
                     DNYEDKGKLVVRSL"
     gene            complement(1788..>2506)
                     /locus_tag="VLA74_02330"
     CDS             complement(1788..>2506)
                     /locus_tag="VLA74_02330"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSF49573.1"
                     /translation="LSSHPTAKVITQKAQEKFGKLPIPNNFHEIAGIGVEGFLNGEHI
                     VVGSQSILENSIDKHSLAKILDLKKQNQFQGKMLAFVNINNVPVGIIVFGDIIRSGVK
                     SMIENLRKGGVKETLILSGDSYENSQIIAQEIGVNSFEANLLPEHKVHSVKKLRERYK
                     NVIMVGDGINDAHTLAVSTVGIAMGVHGTAVSAEAADIVLLVDDVTKVRDTIEISKRT
                     IQIAKQSIYVGLGATLFSWS"
BASE COUNT          850 a          383 c          338 g          935 t
ORIGIN      
        1 aagagtgatt agaatcataa gattgtaatt ggttttccaa attttaataa atcataatag
       61 ttgtattata gtactttcaa attatattat tttagactct ttttttgtta ttttttactc
      121 taaatttaca aaattgttgc attgcgagtt atataaatag agtaaatcgt ttctagattc
      181 gaacaagaga ttacaagata aaagatgaaa aaagaatact attctggtaa aagaagaaca
      241 acagtaaaga tagtctaatt attctggttt taaaaatgaa catccaataa ctactccatc
      301 atccagtgta gaaattcatt agaatcttgg ctaccatgga atagaaaatg attttccaaa
      361 tgtaaaatct ctctttgcct gtaaagaaga agaaatataa tgatgaactt acacaaaagg
      421 atataatata taacaaaaaa atcataaacg atgagtaata gtagaacata ttctatatct
      481 gcaggataaa aatattatct atatgtaaat acttcctgat tttactgatt aaaattattc
      541 atcgactatt tctactataa taaaaataaa aaaggttgaa tatatcttaa taaattttaa
      601 tcgtcttcat attcttcttc ttcttcatat tcctcctcct ctatttctcc atcttctacc
      661 tctattgctc ctggtggtac ataacctgca gtctcagcct tggtcttctg caatgttcca
      721 gcataatgat taggtggaga gtaagttgta aacaacttta gatcagtatt tccagtattt
      781 acaaagttat gaggagtacc tgcgggaaca aatgcaaatg atccttcttt tataggaatc
      841 ttctgaccat taatattgcc ttcaccagta ccttgtacaa acatcaataa ttgatcaatt
      901 ttcttatgaa cttcaagacc aatatcttca ccaggcttaa gactcatcaa aactacctga
      961 gtatggcctg cagtctttat ttcctctcta aagttattat tttgttttgc aagtgatatt
     1021 atatctacaa caaatggagc ggtatcatta cgagaggtag cattagttgt tgttgtcgca
     1081 gttgaagtag aagaagattg attagaaata tttgactgtg tattataaac attattatta
     1141 ttagtactat ctggttgtgc tacagcattt tttactaatg acaaattatt attgtagcca
     1201 ctaaattcta tagaagaaaa taaaaataat ggaacaataa caattatggc tgctataacg
     1261 aaatattgtt tttttaatgc aggataaatt atattgttat ctatcatcgc tatgttgtct
     1321 gtaaaaactt ttatttaaat accaatgtaa ctaagttact ttagcaacag tgtcattcta
     1381 atattgtgaa tatctatgat aatttgtata ataataacaa actactaaaa taatttgtat
     1441 taaattatta aatagttgtt ctaattcttt ctattgtaga gatggaaaga aatcatatcc
     1501 aaattctatc ttttgttatt attatttctt ttatcatcat cattagtagt agtatattgt
     1561 tcttatcatt tagtcaatta tcttttgcac agaaagagga tgacaataaa aatgataatt
     1621 atgaagataa aggcaaacta gtagtgagat ccctctagat atctttaaca atatatataa
     1681 tgaatatttt tgttattatc tagcacgtaa tgcattaaga ataacaataa catccgttaa
     1741 ttcttgaatt aatgcaccca ttgttggagg aatcattcca aaacttgcta tgaccatgaa
     1801 aataaagtag ctcctagacc aacataaata ctttgtttag caatctgtat tgttctttta
     1861 ctaatttcta tagtgtctct tactttagta acatcatcta ctaataatac gatatctgct
     1921 gcttcagctg atactgctgt accatgaact cccatcgcta taccaacagt tgaaacagct
     1981 agtgtatggg catcattgat gccgtcaccg accattatga catttttgta tctttctctt
     2041 agttttttta ctgaatgtac tttgtgttct ggtaatagat tagcttcaaa actgttgaca
     2101 cctatttctt gagcaataat ttgagaattt tcataactat caccacttaa tattagtgtc
     2161 tcttttactc ctccttttcg aagattttca atcatagatt taacacctga tcgtattatg
     2221 tcaccaaata ctataatacc aacaggtaca ttattgatat ttacaaatgc caacattttt
     2281 ccttgaaatt ggttctgttt ttttaaatct aatatttttg ctagagaatg tttgtctatg
     2341 ctattttcta aaatactttg agatcctaca acaatatgtt ctccattaag gaaaccttca
     2401 actccaatgc cagctatttc atgaaaatta tttgggattg gtagttttcc aaatttttct
     2461 tgtgcctttt gagttattac tttagcagtt ggatgtgatg ataatt
//
LOCUS       DATIAS010000117         3835 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1520609, whole genome shotgun sequence.
ACCESSION   DATIAS010000117 DATIAS010000000
VERSION     DATIAS010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3835
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520609"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(838..1011)
                     /locus_tag="VLA74_02335"
     CDS             complement(838..1011)
                     /locus_tag="VLA74_02335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49574.1"
                     /translation="METHKKYRPVSYRMSQKRSMPICFKPDELLIIEEYAKKMGMTNY
                     SQAIEKLAFKSKN"
     gene            complement(1066..1458)
                     /locus_tag="VLA74_02340"
     CDS             complement(1066..1458)
                     /locus_tag="VLA74_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-5A"
                     /protein_id="HSF49575.1"
                     /translation="MSKPMDLGSLKVGSYIIIDNEPCRIVSYDHSKPGKHGSAKARVS
                     AIGVFDGSKHSMVSPVSANVEVPLIDKRSGQIVSITGSSLQIMDLETFEVFETSSVEE
                     EVRDKIVQGGEIEYWKVLDRVKIVRAKG"
     gene            complement(2070..2945)
                     /locus_tag="VLA74_02345"
     CDS             complement(2070..2945)
                     /locus_tag="VLA74_02345"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF49576.1"
                     /translation="MKEISIGIISYNEEKNIITLLNSIKSQNIPAPFLLKEIVISDDS
                     SDVTPDLIRDFMKANPNMSIRLFHSETRRGAASGWNEIFRESSGDILVLYDADIRLEK
                     NCTFNLVKSISGKDIGLCASNPQPIKYSNIYGRATTFISNWLRKIRRSNLTRYTVMGR
                     GLAIRNDLAKKIFIPEDIIAIDLFLQNKLIELGEKIWYNDDAKVFFKSPSTLYDFSSQ
                     VLRARSGHRQISFYKGEELPASANLKATVGCFLKDPVGGLSTIYCYMFIPYYEMRYSK
                     KISSAKWYVAKSTKR"
     gene            3239..>3835
                     /locus_tag="VLA74_02350"
     CDS             3239..>3835
                     /locus_tag="VLA74_02350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49577.1"
                     /translation="MEKGNIFNFGNNFLILIIFLSLLIGVIGNGLVLDQVFAKEHTSQ
                     IDGDTEGIEVYPHSYKKSASDNPSYNDKTFQLKFQEQKDDNRDLNIISKSKEQMNAEK
                     KFEERQDDTLIMKGPPYHEEKGDYEKDIKKEDYTYEDKSKYISDQDEIQSKRDLLRLL
                     LFLSSIDRNDEEERDSSRNSGTDRSNEEDEEERDSKKDF"
BASE COUNT         1422 a          580 c          543 g         1290 t
ORIGIN      
        1 tgattcggga aaacgtctca cttaaaagaa gaatagcaat taatttaaaa catttactat
       61 ctatttaata aatttgaatt taaaatctat taaattctaa tattcaagat gatttacact
      121 aaattttaat tttttttata ttaattcttc gaataaacat atctattact tttttttgga
      181 cgaactagct tagtaaacat atatccttga aaatttctag tgataacgtc aggatgaatt
      241 taaaaacgta aattgcatac atcaatttct tcttctgata ttgccatagt gatatatcga
      301 tatgtgtaca aaatcgctgt tttgaaaggt actttaaaga aatttgaaaa ttatatgaaa
      361 gctaaaaata cttaattgaa aagcttatca aatgtgtttg aaaattttca ataaaaaaga
      421 cacttttttg aaaataacct gaaaaccact tattattttg ttaacattat tattcagtca
      481 ttatctttta atctctttta gagtgcagat taaataaaag atttgtatta taacatttgt
      541 accagtcaaa tgttaaacca atcgatgata tttgatcaaa ttagacaaat gaaatgcaaa
      601 gggatgatta tttagtattt atagattagg tataaactgg tcaaaatggt tacagtcaaa
      661 taccataaaa aaactaatga tgaggttaaa cgaaaactcc tgccaaaaat taacctcagt
      721 taagtaatta tgctgttatc caattgtacg aataaaaata tagtttcttg cacattaaat
      781 acctatcaga tatctttatc ctattctaaa aacataaaaa attaaaataa aaagtactta
      841 attttttgat ttgaatgcta acttttcaat ggcttgacta taattagtca ttcccatttt
      901 ctttgcatat tcttcaataa ttaataattc atctggttta aagcatatag gcatacttct
      961 cttctgactc atacggtaag agacgggtct gtacttttta tgtgtttcca aaaattttat
     1021 ggattttcaa tcataaatat tataaattaa attaaaataa gatgtttatc ctttagctct
     1081 cactatcttg actctatcaa gaaccttcca gtattcaatt tctcctcctt gaacaatctt
     1141 atctcttacc tcttcctcga ccgaagaagt ttcaaatacc tcaaacgttt ccagatccat
     1201 tatttgtaat gaagaacctg ttatagaaac tatttgacca cttcttttgt ctatcaatgg
     1261 aacttccaca ttagcagaaa caggtgaaac catgctatgc ttggatccgt caaaaacacc
     1321 tattgctgag actcgagctt ttgcagatcc atgttttccc ggtttgctat gatcataaga
     1381 aactattcta caaggttcat tatcaataat aatgtaggat ccaactttta aacttccaag
     1441 atccattggt ttactcataa ttactcaaag aggaaacatt ttgatatata atatttctgt
     1501 ttcatcttga atattctaag cgaattatca ctttttggca ctatttctat ataaactggg
     1561 aaatatcacc agaatcatca acctagtaga agaacataaa acgaaaaaat tctaacattg
     1621 tgcgttggtt actcaatatt tttagataat tgataccaac gaacctacca atacacaaca
     1681 agataaaaag attggaaaat gaataagata taacagaaca taaacaaaat atgctaaaaa
     1741 aataaacaaa tgacttttaa tatttaaaat aacaagaaca gtattatgaa taatacgtgc
     1801 tgctacggct gtaatacacc catatactgg catactgtcc gaggagaata ttgggagcta
     1861 tacactaaca agaaacataa atgtcccttt ctgcagaaac aacaactaca agaagtaaaa
     1921 taaggaaaat attattataa tcttcttgcg gggatattat tgttatagct atattattat
     1981 ggaattatta gtattttgaa atatataatt aagtaatttc tgcttcaacc acttatccct
     2041 attagcatgt ttaaggctag gaaaaatatc tatctcttgg tactttttgc aacataccat
     2101 ttggcagagg aaattttttt tgaatatctc atttcataat aagggatgaa catgtaacaa
     2161 tatatggtag ataacccacc aaccggatcc tttaaaaaac aacctacggt tgcttttaaa
     2221 ttcgcgcttg ctggcagttc ttctcccttg taaaaagaga tctgtctgtg accagatcta
     2281 gctcttaaga cttgggacga aaaatcgtaa agcgtagatg gggacttgaa aaataccttt
     2341 gcatcatcat tataccatat cttctcacct aattcaataa gcttattttg taaaaaaaga
     2401 tcaattgcaa taatatcttc ggggatgaat atcttttttg ccaagtcatt acgtattgca
     2461 agtcctcttc ccattacagt atacctggtc agattcgatc tccgaatttt tcgcagccaa
     2521 ttagaaatga atgtggttgc tctgccgtat atgttagaat atttgattgg ttgtggatta
     2581 gaagcacaaa gtccgatatc ttttccagaa atggatttga ctaagttaaa agtacagttc
     2641 ttttccaatc ttatatcagc atcataaaga actaggatat ctccacttga ttcccgaaat
     2701 atttcgttcc atcccgaagc agcacccctt ctagtctctg aatggaatag tcgaatagac
     2761 atattgggat ttgctttcat aaaatccctt atcaaatcag gagtaacatc agaagagtca
     2821 tcagatatga ctatttcttt taagagaaaa ggagcaggaa tattttgcga ctttatagaa
     2881 tttagtaagg taataatatt tttttcctca ttataagaaa taataccaat agaaatttcc
     2941 ttcatgatta atcaatctga aatattatcg taaatttcga taatattaac tttttatatt
     3001 aagaaatata caaaactttt tttatcagtt aaaattttta tacctgatat tctactatca
     3061 ataatagtat tgatatatgt atgcataagc tcctatagaa ttttgatgta ataaaattca
     3121 aaattattaa gcaataatac ttttaccttt cttacttttg atattttcat gattataatt
     3181 ttatattgct tttaatcatt catgttaaaa aataaaagta ctcttatata ttgaaaatat
     3241 ggaaaaaggt aatattttta atttcggaaa taactttttg attttaatta tttttctctc
     3301 gttattaata ggtgtcattg gaaatggatt ggtcctggat caagtatttg caaaagaaca
     3361 tacttcgcag attgatggag acacagaggg gattgaagta tatcctcatt catacaaaaa
     3421 atcagctagt gataatccct catataatga caagacattt caattaaaat ttcaagaaca
     3481 aaaagacgat aatagggatc taaatataat atcaaaatca aaggaacaaa tgaatgctga
     3541 aaaaaaattt gaagaacggc aagatgatac cttaatcatg aaaggaccac catatcatga
     3601 agaaaaagga gattatgaaa aggacatcaa gaaagaagat tatacgtacg aagataaatc
     3661 caaatatata agtgatcaag atgaaatcca aagtaagaga gatttgctgc gtctgctgct
     3721 cttcctttca agcattgata gaaacgatga agaggaaagg gatagtagca gaaattcagg
     3781 cacggataga agcaatgaag aggatgaaga ggaaagggat agtaaaaaag atttt
//
LOCUS       DATIAS010000118         3020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_22213, whole genome shotgun sequence.
ACCESSION   DATIAS010000118 DATIAS010000000
VERSION     DATIAS010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3020
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22213"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            603..>3020
                     /locus_tag="VLA74_02355"
     CDS             603..>3020
                     /locus_tag="VLA74_02355"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HSF49578.1"
                     /translation="MGISEIDKTNNKSVFQIKKRDGRLVNFDESKIEQAIYKALIATG
                     KPNFQLAKKLVQKVLKKMTLNNTSFDKSVIPSVEDVQDIVESILIEDGLSDTAKAYIL
                     YRHERRKIREDKMKIINKKNLDEVDKAFDINSLRVLSSRYLLRNDTNEIVESPKQMFE
                     RVAILVALSDVLHDQTIFHLGGGYNQNISEATSYYNKISHFDLKLKIGSYYLNRYHFE
                     SLIRLYVQLASKGQMKISFKELLKLIFQGKFKEYEDRIKEYYALMVSKDFLPNTPTLM
                     NAGARLGQLSACFVLDMPDDMERIMKTSSDAAMIFKSGGGVGINYSDLRPEGDIVAST
                     SGVASGPASFMRIIDTITDVVKQGGKRRGANMGILEVWHPDIEKFITAKTKPGVFENF
                     NVSIGLWDDFWKSLINKNSNKYTLKNPRTQDPIKQIDSHQLIDLVSLSAWKSAEPGVI
                     FFDNINKYNPCIKAKEGPLKATNPCGEQSLYPYESCNLGSINLSNFVKRKADGMFEFD
                     WSRYEQAIRISSRFLDNIIDANKYPVDDIDYNTKLTRRIGLGIMGIADLLFLLRIPYA
                     SKEGYEFMNKLAETLTYYSMEESVAIAKSRGPFPLFKKSDYVAGKIPVAGYYEMPKEY
                     HSYDWDSLIEKIQKFGIRNSWTTTIAPTGTLSMIADCSNGIEPVFALVFEKRVTVWRF
                     FYTNKIFENVLKENGLYNDDILTKIANNYGSIRGLNDIPEWMQNMFTTAIDIHWMDHI
                     MAQSVWQRWISNAIAKTINMPGDVTVEDVKSSYLLAHELGLKGVTVYRDGSRNEQVLH
                     ITGTNTLE"
BASE COUNT         1126 a          387 c          482 g         1025 t
ORIGIN      
        1 atttttctta gaactaggta actaaagcta ataagtaata gacgaagtac attcccgttt
       61 tagtgtagac attatttaat tagttacctt tattacttaa aaatagataa atttaattca
      121 acttccaaat ataattataa acatatcaaa tgctaaagtt gtatattaaa gcttaatctg
      181 tatttatagt caattaatca caatttttat ttgagccgat cctatatttt attaacttgc
      241 aaatccgata tttttacata cacaaataaa tacttatttc cttaaggtgg ctacctttac
      301 ctgtaaaagt attactcctt attgcttatt tattaaaaca ttatatattg tacaatttta
      361 taattatatt aataaaacta gcaaataaat taaaaagaat ttaagtaact tttaatataa
      421 taagaacaaa aaatctagta tattgttatg caataaattt ttctgatctt tttctgtatc
      481 attttttctg tttcaattct aaaataatta tattgtataa attattagct tattgtttta
      541 cataatatta atatccaagt cttaaattac ttaaaatatt atttgtaata ggatgaagat
      601 atatgggaat ctcagaaata gataaaacta acaataaatc tgtatttcaa ataaaaaaac
      661 gagatggcag attagtaaat tttgatgaat caaagataga acaggcaatt tataaagctt
      721 tgatagcaac tggcaaacct aattttcaat tagcaaaaaa gctagttcaa aaagtcttaa
      781 aaaagatgac tctcaataat acttcatttg ataaatctgt cattccaagt gtagaagatg
      841 ttcaggatat agttgaatca attcttattg aggatggatt atcagatact gcaaaagctt
      901 acattcttta tagacacgaa agaaggaaga tcagggaaga taaaatgaaa atcatcaata
      961 aaaaaaatct tgatgaggta gataaagctt ttgatataaa ttctttacgt gttttatctt
     1021 cacgttacct tcttcgaaat gatactaatg aaattgtgga atctcctaaa cagatgtttg
     1081 aacgggttgc tattcttgtt gctttgtctg atgtcttaca tgatcaaact atattccatt
     1141 tagggggcgg gtataatcag aatatatcag aagctacatc atattataat aaaattagcc
     1201 actttgatct taaattaaag attggctctt attatttaaa tagatatcat tttgaatcac
     1261 taattcggtt atatgttcag ttagcttcta aaggacaaat gaagatttca tttaaagaac
     1321 ttttaaaatt aatttttcaa ggaaagttca aagaatatga agatcgaata aaagaatatt
     1381 atgctttaat ggtatcaaaa gatttccttc ctaatactcc tactttaatg aacgcaggag
     1441 ctagattagg gcaactttcg gcatgttttg tattggatat gcctgacgat atggaacgaa
     1501 taatgaagac ttcctcagat gcagctatga tctttaaatc agggggtggt gttggaatta
     1561 attattctga cttaagacct gaaggtgata ttgttgcatc tacatctgga gttgcatctg
     1621 gtccagcgtc ttttatgcga attatagata caattaccga tgttgtaaaa caaggaggca
     1681 aaagacgcgg agcaaatatg ggaattttag aggtttggca ccctgatatt gaaaaattta
     1741 ttaccgcaaa gacaaaacct ggggtttttg aaaactttaa tgtgagcatt ggcctatggg
     1801 atgatttttg gaagtcgctt attaataaaa atagtaataa atatactctt aaaaatccta
     1861 gaacacaaga ccctattaaa cagatagatt cgcatcaact aatagatctt gtctcattaa
     1921 gtgcatggaa aagtgcagaa ccaggagtta ttttctttga taatataaat aaatacaatc
     1981 catgcattaa agcaaaagaa ggaccactta aagctacaaa tccttgtgga gaacaatcat
     2041 tatatccata tgaatcttgt aatcttggat ccattaattt atctaacttt gtaaaaagaa
     2101 aagcagatgg aatgtttgaa tttgattggt caaggtatga acaagctata agaatctcat
     2161 caagattttt agataatatt atagatgcta ataaatatcc tgttgatgat atagactata
     2221 atacaaagct tacaagaaga ataggtttag gaattatggg aattgctgat cttttatttc
     2281 tattgagaat tccatatgct tctaaagaag gttatgaatt tatgaataaa cttgccgaaa
     2341 cattaactta ttatagtatg gaagaaagtg tagcaattgc caagtctaga ggcccatttc
     2401 cattattcaa aaagtctgac tatgtagcag gcaaaattcc agtagcagga tattatgaaa
     2461 tgcctaaaga atatcattct tacgattggg attcattaat tgaaaaaatt caaaagtttg
     2521 ggattcgtaa ttcttggact actactattg cccctactgg aactctatca atgatagcag
     2581 attgttcaaa tggtatagag ccagtctttg cattagtttt tgaaaaacgt gtaacagtat
     2641 ggagattttt ctatactaac aaaatttttg aaaatgtatt aaaggaaaat gggttatata
     2701 atgatgatat tttaacaaaa atagctaata attatggatc aattagagga ttaaatgata
     2761 taccagaatg gatgcaaaat atgtttacaa cagctattga tattcattgg atggatcata
     2821 taatggctca atctgtatgg caaagatgga taagtaatgc tatagcaaag actattaata
     2881 tgccaggtga tgtaaccgtt gaagatgtta aatcttctta tttactagct catgaattag
     2941 gattaaaagg cgtgactgta tatagagatg gttctagaaa tgaacaagtt ttacatatta
     3001 caggaactaa tacattagaa
//
LOCUS       DATIAS010000119         3184 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1520915, whole genome shotgun sequence.
ACCESSION   DATIAS010000119 DATIAS010000000
VERSION     DATIAS010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520915"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..793)
                     /locus_tag="VLA74_02360"
     CDS             complement(134..793)
                     /locus_tag="VLA74_02360"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HSF49579.1"
                     /translation="MSQMDLYPSANIALLVIDVQNGFVSEGGSYDLLGMNVSNYQKVV
                     PKIKELIDLCRKFKIPIFYTQAVREASGIDLLTKTHRILPVSREERIKKRPICVRGTW
                     DSKILEEIKPTTKDHIIIKRRDSAFQDTETEVWLRSIGIDTLIFCGIDTSICVETSLR
                     DGFNRGYDIILISDATASSNVQHYKTTIEHVKEYYGMILTIDELRQIFETRIMIKSTI
                     K"
     gene            complement(904..2589)
                     /gene="asnB"
                     /locus_tag="VLA74_02365"
     CDS             complement(904..2589)
                     /gene="asnB"
                     /locus_tag="VLA74_02365"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HSF49580.1"
                     /translation="MCGIAGVISKESTDVVPFMKSMMMCMKNRGPDGAGLSIDKEIYQ
                     SNSVEKLSFDNTSSDMVLGHVRLAIVGGTCGSQPFKSCDNRLLLEHNGEIYNYKELRQ
                     ELIKRHKFSSDTDSEVVVHLLEDNYNRYNCTDLVKAIKDTMEQLDGVYVFAIKDQHTG
                     NVYLVRDRLGIRQIYYGENKEIIGFASERKALWEIGLKEPTYSLLPGHCVIISKNISK
                     PFKMLDPPVSQNQLYNTMEDSIDIYKKVLLNSIKKRTQDQKKIGVIFSGGIDSVLIAH
                     IIKDFVPEVTCYTSGVKGSLDLEFVKSIGEELDLNLRTKELDYDYVEKHLPDIINIIE
                     TNNLTQVETAIPIFAAVQMAASDNQRILFSGQGADELFGGYPWYRNVVAKEGYDRLRE
                     HMTQDLLLLYKETLEREDKISMAFSIESRVPFLDPKVVRASTSIDMKLNINDDNDIFG
                     KRVHRELALRLGIPHHIAYREKLAAQHGSGIHDFLKKIANKNFYTKDMVTKTYIDKLE
                     LREKLGSSDRYGYLYGSQELWKTDPTVQMYLDNIICSYNKKYLNQIICSYNKK"
BASE COUNT          982 a          557 c          439 g         1206 t
ORIGIN      
        1 ttatccttga atatcataac acaattataa attaaattcg gtctatttat caggtggttt
       61 ctcattcggt tagcatgatc tattttatta gaaacatcgt ttacttataa taattcgaag
      121 atttagatac tttctatttt attgtcgact ttatcattat ccgtgtctca aatatctgtc
      181 tcaattcgtc aatagtcaga atcatgccat aatattcctt gacatgttct attgttgttt
      241 tgtaatgttg aacgtttgat gatgctgtag catcagaaat tagtataata tcatatcctc
      301 tgttgaatcc atctcttaag gatgtctcaa cacatattga ggtatctatt ccgcaaaaaa
      361 tcaatgtgtc aatgccaata cttcttagcc atacttcagt ttcagtatcc tgaaaagctg
      421 aatctcttct tttaattatt atatgatcct ttgtggtagg ttttatttct tccaatatct
      481 ttgaatccca tgtaccacgt acacatatcg gccttttttt gattctttct tccctggata
      541 ctggtaaaat acgatgagtt tttgtcaaaa gatctatgcc tgaagcttct ctaacagctt
      601 gagtataaaa gattggaatt ttaaattttc gacacaagtc aatcaactct tttatctttg
      661 gtactacttt ttggtaatta gatacattca taccaagtaa atcataagaa ccgccctcac
      721 taacaaatcc attttgaaca tctattacta gcaatgctat atttgcactg gggtagagat
      781 ccatttgaga cattatcttt ttatcgtgta tcaacgtacg gtattgatat ttaattgtaa
      841 tttaaaaatt ataaatatga tagctttatt gctaaaacat tttttcttga ttgtttcgaa
      901 ttattatttt ttgttatagc tacaaataat ctggtttaga tattttttgt tataactaca
      961 aataatattg tctagataca tctgaactgt cgggtctgtt ttccataatt cttgactacc
     1021 atataaataa ccatatctgt cagaacttcc aagtttttct ctcaattcca gtttatcaat
     1081 ataagttttg gtaaccatat ctttggtata aaaattttta ttggcgattt ttttcaaaaa
     1141 atcgtgaatc ccagatccat gttgtgcagc tagtttttct ctgtaggcga tatggtgtgg
     1201 tattcctagt cttaatgcta attctctatg aacacgtttt ccaaaaatat cgttatcatc
     1261 gttgatattt agtttcatat ctattgaagt agatgctctt acaacctttg gatctagaaa
     1321 aggtactcga ctttcaatgc taaatgccat tgaaatttta tcttctctct ccaaggtttc
     1381 tttgtaaagt aaaagtaggt cttgagtcat atgttctcgt aatctatcgt acccttcctt
     1441 agcaacgaca tttctatacc acggatagcc gccaaatagt tcatctgctc cttgacctga
     1501 aaataatatt cgttgattat cactagctgc catctgcact gcagcaaaaa tgggtattgc
     1561 ggtttctacc tgtgtaagat tatttgtttc tatgatgttg attatatctg gaagatgttt
     1621 ttcaacataa tcgtaatcta attcttttgt acgcaaattc agatctaatt cttctccgat
     1681 tgatttgaca aattcaaggt ctaaagaccc ttttactcca ctagtataac aggtaacttc
     1741 tggaacaaaa tcttttatta tgtgtgctat taaaacacta tcaattcctc cagagaaaat
     1801 aacaccaatt tttttctggt cctgtgttct ttttttaatg gaatttaata aaactttttt
     1861 gtatatgtca atggagtctt ccattgtatt gtataactgg ttctgactga caggagggtc
     1921 aagcattttg aatggctttg atatgttttt ggaaatgatc acacaatggc ctggcaataa
     1981 cgaataggta ggttctttta atcctatctc ccacaacgcc tttctttcag aagcaaatcc
     2041 tatgatctct ttgttctctc cataataaat ttgccttatt ccaagtctat ctctgaccaa
     2101 atatacatta ccagtatgct gatccttaat cgcaaagaca tatactccgt ccagctgctc
     2161 catcgtatct ttaattgcct ttacaagatc tgtacaatta tatctattgt aattatcttc
     2221 cagcaaatgt actactactt cactgtcagt gtctgaggaa aatttatggc gttttattaa
     2281 ttcttgtcta agttctttgt agttatatat ttcgccattg tgttccaaca ataatctatt
     2341 gtcacagctt ttaaagggct gtgaaccaca ggtaccgcca actatagcta atctgacatg
     2401 acctaaaacc atgtctgaag atgtattatc aaaagataat ttttcgactg agtttgactg
     2461 gtaaatttct ttatctatag acaggcctgc accatctggg cctctatttt tcatacacat
     2521 catcatagat ttcataaaag gaaccacatc agttgattcc ttacttatta cacctgcaat
     2581 tccacacata ataaattata tactttatga tagtaaataa ctctttttat atcttactga
     2641 cgaatgttta tacgaatgtt tatattacgt aatctttttt tgctgaaact gttaaagttt
     2701 aaggaaaaaa acaagaaatt taaatatgta tcactcaatt tacaatataa aaatcaattg
     2761 aagatggaaa tttgatatta aatctcacta attaaaattt tttaaataaa ataatcagtt
     2821 taataatatt tcatatttcc atttaaacgc taatcaccaa aatcagggga cgatcatgaa
     2881 aaatcactta ttctaaatgt aaagtacttt ttattcccag gatcatcgta acaactgtta
     2941 tatacaatga agatatgaat tcttttacta tttcaaagct gatcaaaaaa tttaatattc
     3001 ttataatatc ccttctggat cctttacagt ttatctggtg tccggagata taatcttaca
     3061 ccagtgtcga taaacctttc attgtctata aatttttcat catgggtagt ttcaaggcca
     3121 accagtaggt gtttaagaat aaaattcaat atgaaaaatg aggaatataa ctataattag
     3181 attt
//
LOCUS       DATIAS010000120         2054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1930835, whole genome shotgun sequence.
ACCESSION   DATIAS010000120 DATIAS010000000
VERSION     DATIAS010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930835"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1096
                     /locus_tag="VLA74_02370"
     CDS             <1..1096
                     /locus_tag="VLA74_02370"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSF49581.1"
                     /translation="GSEKPIDFEITNNLKNLIRTLVDNGTNAAIVIGIVDPNGIQFYG
                     YGKTSNATNATNATVVNEDTIFDIGSITKTFTTTLLADMVNEGIFKLEDPIENYLSSS
                     VKVPMYYGQKITLEDLATHTSGLPENPPNLQISNITSYSNYTREQLYQALSNVTLKTA
                     PGTHFEYSNMGIAILGDILALKTGIPYEKLVKYRILNVLGMNSTMINLSDPLISRLAL
                     GHDSGIEIPITSVDLVIPPPLAPAGSLRSSAADMIKYLSANIGLMKTKLNDAMKNAQM
                     VRSYTNLSGIAPYNLYIGLGWITTTNFSSQIIWHNGEVIGYNSLAAFNPATQRGIVIF
                     CSCTSQDIDVANIGFGSHDELSNNIWNLLL"
     gene            complement(1843..>2054)
                     /locus_tag="VLA74_02375"
     CDS             complement(1843..>2054)
                     /locus_tag="VLA74_02375"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HSF49582.1"
                     /translation="NVWIFGGANIAQQYLKLGLIDEISIGITPTLLGSGKRLFDNIGK
                     HIELTLTKTKQYDEGLTELNYRINV"
BASE COUNT          739 a          303 c          292 g          720 t
ORIGIN      
        1 tgggtcagaa aaaccaattg actttgagat aacaaataat ttaaaaaatc taattagaac
       61 tctagtagat aatggtacta atgccgcaat tgtaatagga attgttgatc caaatgggat
      121 acaattctat ggatatggta aaacatctaa tgcaactaat gcaactaatg ctacagtagt
      181 aaatgaagat acaatttttg atattggttc tataaccaaa acatttacca ccactctttt
      241 ggctgatatg gtaaatgaag gaatattcaa gttagaagat ccaattgaaa actatctttc
      301 atcttcagtt aaggtaccta tgtattatgg acaaaagatt actctagagg atttagctac
      361 tcatacttct ggattacctg aaaatcctcc taatttacag ataagcaata taacaagcta
      421 ttcaaattat acacgtgagc aactttatca agccttatct aatgttacct tgaaaacagc
      481 tcctggtaca cattttgaat attctaatat gggtatagct atattaggtg atattttagc
      541 cttaaaaact ggtattcctt atgaaaaact tgtaaaatac agaattttaa atgtcttagg
      601 gatgaacagt acaatgatta atctttctga tccattgatc tctcgtctag cattaggaca
      661 tgatagtggt atagaaattc ctatcacttc tgtagatctt gtaattcctc ctcctcttgc
      721 cccagcaggt tcacttcgtt cctctgctgc agacatgata aagtatttat ctgctaatat
      781 aggcttaatg aaaaccaaat taaacgatgc aatgaaaaat gcgcaaatgg taagatcata
      841 tactaatttg agtggaattg caccttataa cctctatatt ggactaggat ggattacaac
      901 tactaatttc agttctcaaa ttatttggca taatggtgaa gttattggat ataatagtct
      961 agctgctttt aatccagcta ctcaaagggg aattgttata ttttgtagtt gtacgagtca
     1021 agatattgat gtagcaaata ttggttttgg ttctcatgat gaactttcaa ataatatatg
     1081 gaatctattg ctataaaatt aattgatttg agttttatat cagtataatc aaattgttga
     1141 tcaatgatca ctgaaatata tttctttttg attccttcct ttacaaatat ctttatttta
     1201 atcttcaatg tttatgatta cttcattctt acaaatatag aattttttaa gcctaattta
     1261 ttgaataagt ttaaaaatat ataactaaaa tcatataaaa gtaaattaat atatattatg
     1321 ttaccgaacc ctgctataat gagaaatcga agctatcaga accattactt tttttgatat
     1381 ttttaaatag tataatatga taaatatttc acagatatgt cagaaaatga agagacatca
     1441 tcatctgaaa gagtaaagaa gatgaattta ttttaaaaag ggcaaatcag gcaaatatca
     1501 aagaagagga agagaaaggc acaaccgtta aagtagatgt aaaagaagat acttacctct
     1561 caagaatgaa atgatacctt tacatataga tagctaatag atcctagaat aatccatgaa
     1621 tatgaatatg atgaaatgat aataggattt gctactatcc tagagaagta atatattatt
     1681 acattgataa ctttcaaatc taaacttgtt tatctaacta aaattacttg ttatacaaat
     1741 tgatttttca attaataaac cgtattaaaa aattgtgttt ttccactatt tttacatcat
     1801 atttttaata tacagctaat tttttagcga tagatacatt catcatacat ttatcctata
     1861 attaagttcc gtaagacctt catcatactg tttagtctta gtcaatgtaa gttcaatatg
     1921 tttaccaata ttgtcaaaca gtcgttttcc actgcctaga agagttggag taatgccaat
     1981 gcttatttca tctatcaaac ctaatttcag gtattgttgt gcaatatttg cccctccaaa
     2041 tatccataca tttt
//
LOCUS       DATIAS010000121         3510 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1248787, whole genome shotgun sequence.
ACCESSION   DATIAS010000121 DATIAS010000000
VERSION     DATIAS010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248787"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..672)
                     /locus_tag="VLA74_02380"
     CDS             complement(61..672)
                     /locus_tag="VLA74_02380"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF49583.1"
                     /translation="MVIQRIDVGANHLGSKHRDANMTTRILVRDIMNSPIISSSPDSN
                     IKEIAEKMKTEKIGSIVIFEAEKPVGIVTDWDIVTDGFSRDVPPSSIKTSEIMKKLYT
                     IEGEATITEAARMLRKHNIKRLGVVYKNRVVGIISSSDVISVTPELIDVISEKAALIR
                     GEIGRPTGHISGYCDECGEWTDLLLYSEGTFTCEECRGESSLS"
     gene            complement(702..2678)
                     /gene="rqcH"
                     /locus_tag="VLA74_02385"
     CDS             complement(702..2678)
                     /gene="rqcH"
                     /locus_tag="VLA74_02385"
                     /inference="COORDINATES: protein motif:HMM:NF041120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome rescue protein RqcH"
                     /protein_id="HSF49584.1"
                     /translation="MELSSIEIRYIINYINSKLIAIGGYYLSQVNGITKDSLALKFHH
                     STEPDILLIISSKGTWITKMLFKQVEENDLVRSAKKELERSRIISIEQLDSERIVIFK
                     FENPNSTIRYLICEFFGQGNIIICDETMKILSILNPLEVRHRTLRIGLKYSPPPSKGL
                     DIFKISIEELERQYQNQTRNLEISKWLGRSLSLPKKFVEEILFRGNTNNNKKIKEITR
                     DNLLSIFTNTKKVVEEVLSENKHSPIVILDTNNVPFDASHIPLKIMKDSNMKPMDSFM
                     DALDQVLCNDIITIGKRLHTIELDKKLSILEHDLLEQEKAKQKVLAKSNTIRILASDL
                     MNISSSNPIELDNLLNRHSSKLIMEKGKKYFVIGEELIQFDDNLRKVASLLYERAKEM
                     ERGSETIDKARLKILDEITELKRKTNIAEKKIDVKEQKSKEWFERYRWFITSEGLLVI
                     GGRDASSNSAIIRKHMTEMDVVFHAEIHGSPFFLIKNIGLNGQDITQNSQSLLEGAIA
                     TVSFSRAWKDGLSSADAYWVYPNQVKKGAPTGQFLPKGSFVIEGKRNFIKGLELKLSI
                     GVTKENNNYKIICGPVESIKSKSIIHSILLPGTLDSMYAAKKIKTELINNSQNKVELI
                     EFLKKVSLDDIIRVLPSGKIKITLSERGNLYANL"
     gene            2783..3079
                     /locus_tag="VLA74_02390"
     CDS             2783..3079
                     /locus_tag="VLA74_02390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49585.1"
                     /translation="MEPTDKVYYVRALLGIIAGVTIAFVIAPNTNQGTVIGVVFIMAL
                     FFYIVSYWLSKKIIPNVPKAEKRKFITNGIFPFIFLLLMFMILAYTGLHQNLAM"
     gene            3098..>3510
                     /gene="cbiT"
                     /locus_tag="VLA74_02395"
     CDS             3098..>3510
                     /gene="cbiT"
                     /locus_tag="VLA74_02395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6Y C5,15-methyltransferase
                     (decarboxylating) subunit CbiT"
                     /protein_id="HSF49586.1"
                     /translation="MSWNIKTPGIPDEFFFRNEEIPITKEEVRSIIISKLRLNEDYSV
                     IDIGCGSGSITVELCLQCRNGKVFGIDLDSKAIDLTKTNLEKFKVIAEIIKGDAYDIL
                     ESLPSVDGIIIGGTTGKTEAIIHRSINKLNKGGRLV"
BASE COUNT         1152 a          564 c          471 g         1323 t
ORIGIN      
        1 tttcctttaa aattttaaac aaaaattcac aaatatctaa aaatggaaat gttaaccttt
       61 ttaggataac gaagattctc cccggcattc ttcacaggta aaagtacctt cactatataa
      121 taaaaggtcg gtccattctc cacattcatc acaataacca gaaatatgtc ctgtaggacg
      181 accaatttct cctcgtatca aagcagcttt ttctgaaata acatctatta attcgggagt
      241 aacagatata acatctgagg atgagataat accgactact ctatttttat aaacaactcc
      301 taatcttttg atgttatgtt ttctcaacat cctagctgcc tctgtgattg tagcttctcc
      361 ttcgatagtg tacagctttt tcataatctc cgatgtttta attgaactag gtggtacatc
      421 acgagaaaag ccatctgtaa caatatccca atcagtgact attccgactg gtttttcagc
      481 ttcgaaaata acaatacttc caattttttc ggtcttcatt ttttctgcaa tttctttaat
      541 attagaatca ggagatgagg aaataattgg actattcata atgtctctaa ccagtatcct
      601 tgttgtcata tttgcatctc tatgtttact gcctagatga ttggctccca cgtcaatcct
      661 ttgtattacc aaacataatt agtttactgc tataaaagaa atcataaatt agcatataga
      721 ttacctcttt cagataaagt tattttgatt tttcctgaag gtaatacccg aattatatca
      781 tccaaggata ctttttttaa aaattcaatt aattccactt tattttgtga attatttatt
      841 aattctgttt ttattttttt tgcagcatac attgaatcca gagtaccagg caatagtatg
      901 gaatgaatta tactttttga ttttatactt tctacaggtc cacatatgat tttataatta
      961 ttgttttctt ttgttacacc tatagataat tttaattcca atcctttaat aaaatttctt
     1021 tttccttcaa ttacaaaaga tcctttagga agaaattgtc ccgttggcgc tccttttttt
     1081 acttgattag gatataccca atatgcatca gcactagata aaccatcttt ccaagctcta
     1141 ctaaaagata ctgtagctat ggctccttct aaaagacttt gactattttg agtaatatct
     1201 tgcccattga gcccaatatt tttaattaaa aaaaaaggag aaccatgaat ttccgcatga
     1261 aaaactacat ccatttcagt catatgtttt cttattatag ctgagtttga ggaggcatct
     1321 cttcctccaa tcactaataa accttcagaa gtaatgaacc atctatatct ttcaaaccat
     1381 tcctttgact tttgttcttt tacatcaatt tttttttcag caatatttgt ttttcttttt
     1441 aattcagtta tttcatctaa tattttaagt ctagccttat caatagtttc acttcctctt
     1501 tccatttcct ttgctctttc ataaagaaga gaagccacct ttctcaaatt gtcatcaaat
     1561 tgaatcagtt cttctcctat gacaaagtat ttttttccct tttccattat aagtttggat
     1621 gaatgtctat tcaaaagatt atctaattca ataggattag atgaagaaat attcatcaaa
     1681 tcagaagcaa gtattctgat tgtgttagat tttgctaaca ctttttgttt agccttctct
     1741 tgttccaaga gatcatgttc taaaattgag agttttttat caagttctat agtatgaagt
     1801 ctttttccaa tagtaattat atcattgcag aggacttgat ctaatgcatc cataaatgaa
     1861 tccattggtt tcatattcga atctttcatt atttttaacg gtatatgtga tgcatcaaaa
     1921 ggtacattat ttgtatctaa aatcactatt ggcgaatgtt tattttcaga taatacttcc
     1981 tcaactacct tttttgtatt tgtaaaaatt gataaaaggt tatctctagt tatctccttt
     2041 atttttttat tattatttgt atttcctcga aaaagtatct cttctacaaa tttttttggt
     2101 aatgagagac ttcgtcctaa ccatttagag atttccaaat ttcttgtttg gttttgatat
     2161 tgtctttcta actcttcaat tgatatttta aagatatcta atccctttga tggcggagga
     2221 gaatatttta atcctatacg taatgttcta tgtcgtactt ctagtggatt aagaattgac
     2281 aatatcttca ttgtttcatc acaaataatg atatttcctt gaccaaagaa ttcacatatt
     2341 aaatatctaa ttgtgctatt aggattttca aatttaaaaa ttactatcct ttcagaatct
     2401 aattgttcaa ttgatattat tcgagatctt tcaagttctt tttttgcact tctaactaaa
     2461 tcgttttctt cgacttgttt aaatagcatt ttagtgatcc acgtaccttt agaagaaatt
     2521 atcaaaagaa tatccggttc agtagaatga tgaaatttta atgccagaga atcttttgta
     2581 atcccattga cttgactcag ataatagcct ccgatagcaa taagcttaga atttatgtaa
     2641 ttaataatat aacgtatctc tattgatgat aattccaata ctaaaataat tatttaatag
     2701 ctaaatatta actacaatct aataatatta aaaaaaatct gaccggaaag aattaaactc
     2761 tctattattt aatgaattcc atttggaacc aactgataaa gtctattatg taagagcatt
     2821 attaggaata attgcaggtg taactatagc atttgttata gctcctaata ctaatcaagg
     2881 gacggtaata ggagttgtat ttattatggc tttatttttt tatattgttt cttattggct
     2941 atcaaaaaaa attatcccaa atgtaccaaa agctgagaaa agaaaattta ttactaatgg
     3001 tatttttcca tttattttct tgcttctaat gtttatgata ttagcatata caggcttaca
     3061 tcaaaatctc gcaatgtaga taaataaata aaaaagaatg tcttggaata ttaaaacacc
     3121 tgggattcct gatgaatttt tttttagaaa tgaggaaata ccaataacta aagaagaggt
     3181 tcgctcaata ataataagca aacttcgtct aaatgaagat tattcagtta ttgatatagg
     3241 gtgtggaagc ggcagtatca cagtagaact ttgtcttcaa tgccgaaacg gaaaagtatt
     3301 tggaattgat ttggactcca aagcaattga tttaactaaa acgaatctag aaaagtttaa
     3361 agtaattgca gaaattataa aaggagatgc ctatgatata ttagaatcac ttccctcggt
     3421 agatggtatt attataggag gaactactgg aaaaactgaa gcaataatac atcgatcaat
     3481 aaataaatta aataaaggag gaagattggt
//
LOCUS       DATIAS010000122         4123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1249021, whole genome shotgun sequence.
ACCESSION   DATIAS010000122 DATIAS010000000
VERSION     DATIAS010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4123
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249021"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VLA74_02400"
     CDS             complement(<1..437)
                     /locus_tag="VLA74_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49587.1"
                     /translation="MILDKYSDAIHSTNRRWKFFNMYAMDIWIYLIGFLGLVFFFYIS
                     ELNGILKSPPFSESAVHSATWGTFGGILPGLWFLKDIVSERSYRKAFRILYFSIPFLG
                     GLFGVLSYLIIAAGLLTYGGVPSPDSAIFGLYDNTIENVTSQG"
     gene            532..726
                     /locus_tag="VLA74_02405"
     CDS             532..726
                     /locus_tag="VLA74_02405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49588.1"
                     /translation="MLVNKPFSTAELTHTSTFAIVSCNFVRSFKYSALCSSSVRGVSP
                     SFLVGVVVVVGVSPSFFVTI"
     gene            1122..2714
                     /locus_tag="VLA74_02410"
     CDS             1122..2714
                     /locus_tag="VLA74_02410"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HSF49589.1"
                     /translation="MSFSSTIDKTANPSTYGYWEPIKYKFKHLPIHIALLHTEKVLAF
                     GGSGNDPHYLNNSFPAEIFEPNEIGKDNGRVYTISNNGIQGDIFCAGHTFFPDGKLLV
                     AGGTYKYDGSSLNPKLPPFSGLEHTYIFDPISLSWQRVQNMKHGRWYPTCIMVSDGRI
                     ITMAGLSKKFPWVFLSEIEAFYNDSKEWKIMKGSNWRLPLYPRLHLLPNGEIFYAGSF
                     NTHYVYPFIVTAFPSATFNINTGKWQKIGNPHNKKREEGTTVLLPLLPPHYHAKVLLI
                     GGGTFQGDNAISDIEIIDFSLSDPKYRHIGNMKHPRYYNYAVILPDQSILVLGGKLGK
                     KGHISDHNKNLLRRGHDHRHEGELSHIDEAVLEPELYKPDENRWYPMADMKVDRLYHS
                     NALLLPDGRVMTAGSNPERGMNELRIEIFNPPYLFQGERPQINKVSSEKITYGSSFEI
                     ETNNHQAENILSVALIHPTVTTHCVNVDQRYIGLEFDKIDSKSLKSSIPVNKNIVPPG
                     YYMLFIINKNKIPSVARFVCIN"
     gene            complement(2880..3560)
                     /locus_tag="VLA74_02415"
     CDS             complement(2880..3560)
                     /locus_tag="VLA74_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49590.1"
                     /translation="MNFDNSQHLQNKTKALPLREPEEGKKWWRTLDAQFIKVFDASVG
                     TYYINKQINKIIVILGIVLIAYALIYHTYSSFYFDNSDSNTNQQLPIDNNGTKDNDNK
                     LPDITGLISGGAGIASLITLFFYKSQRYIQQSLTNLAITEMIYKSHYLTFETISDYHS
                     SIFLSSGETKNKKISIDEINKLNKMLLSYTTNYVNTLTGKSRFEGPTKIEEGPTKIEE
                     GPTERKAD"
     gene            complement(3847..>4123)
                     /locus_tag="VLA74_02420"
     CDS             complement(3847..>4123)
                     /locus_tag="VLA74_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49591.1"
                     /translation="GGSWYPEACTSLRLEHRLHSPYEKSIIERAIEYVKDRTEQFDDC
                     YPCRKFDCNLSHVYNWIQLFVFMHNGIRRSHLKFRLLMYLVGGDTSH"
BASE COUNT         1394 a          615 c          584 g         1530 t
ORIGIN      
        1 tttccttgtg atgtaacatt ttctattgta ttgtcgtata atccaaaaat agcactatct
       61 ggtgatggta ctcctccata tgttaataat ccagctgcaa ttattaagta tgaaagaact
      121 ccaaatagac ctcccaagaa cgggatgcta aaataaagaa tcctaaaagc tttacgatag
      181 cttctttcgc tgactatatc tttgaggaac caaaggccgg gtaaaattcc tccaaatgta
      241 ccccatgttg cagaatgtac agcagactct gagaatggtg ggctttttaa aattccatta
      301 agttctgaaa tataaaagaa aaatactagt cctaaaaatc ctattaaata tatccatata
      361 tccatcgcat acatattgaa aaatttccaa cgacgattag tagaatgtat tgcatcagaa
      421 tatttgtcta atatcaaatc taaattatag tcagattcaa ttaaatctcc ttcttttaaa
      481 cttgtgtttg cagattttaa tttttcgata attgatgtat atagttcctt tttgttagta
      541 aataaaccat tctctactgc agagcttacc catacatcta cttttgcaat tgtttcatgt
      601 aattttgtac gttcttttaa atattctgct ctttgttctt catcagtcag aggtgtttct
      661 ccatcatttt tggttggtgt tgttgttgtt gttggtgttt ctccatcatt tttcgttact
      721 atctaacttt atatctttat tattagaaat atctaggaat ctcattcaac aggattataa
      781 aattagtatt atttaataat attgaatggt atatttataa gatagaactt atattaagga
      841 atggtttgtt tttattatat caatattcat aaaaatatat tataaaaatt gccaaaataa
      901 aatttcttga tattatagag ataataaatt taaaattgta aatttattat aaaattcttt
      961 tatatctaga aatttgctaa tttattataa gtatattaaa atttttttta tcctttatga
     1021 aattatatgt aacaaagttt tttcggtgcc gaaaaatttt tttactatta tagataacaa
     1081 caatattctt aagtaacaaa tctataaata aatatattat tatgtctttt tcttctacta
     1141 ttgataaaac agcaaatcct tctacatatg gttattggga accaataaaa tacaaattta
     1201 aacatttacc tattcatata gctttattac atactgaaaa agtattagca tttggaggat
     1261 ctggaaatga tccccattac ttaaataatt catttcctgc tgaaattttt gaacctaatg
     1321 aaataggaaa agataatggt agagtctata caatttctaa caatggaata caaggcgata
     1381 ttttttgtgc aggccatacg ttctttcctg atggaaaatt attggtagct ggaggaacat
     1441 acaaatatga tggctcttct ttgaatccta aacttcctcc atttagcgga cttgaacata
     1501 cttacatatt tgatcctatc tcactctctt ggcaaagagt acagaatatg aaacatggcc
     1561 gttggtatcc tacttgcatt atggtttcgg atggtagaat tattactatg gcaggattat
     1621 caaaaaaatt tccatgggtc tttttaagtg agatagaggc tttctataat gattctaaag
     1681 aatggaaaat aatgaaaggt tcgaattgga ggcttcctct ttatccaaga ctacatcttc
     1741 ttcctaatgg tgagatattt tatgcaggtt ctttcaatac acattatgtt tatccattta
     1801 tagtaacagc atttcctagt gcaactttta atataaatac tggaaaatgg caaaaaattg
     1861 gaaatccaca caacaaaaaa agagaagaag gaactactgt tttactaccg cttttacccc
     1921 ctcattatca tgccaaagtt cttttaatag gtggtggaac ttttcaaggt gataatgcta
     1981 taagtgatat agaaataatt gatttttctt tatcagatcc taaatatcga cacataggca
     2041 atatgaaaca tcccagatat tataattatg ctgtaatatt acctgatcaa agtatattgg
     2101 ttttaggtgg aaaattagga aaaaaaggtc atatttctga tcataataaa aatttacttc
     2161 gacgaggaca cgatcaccgt catgaaggtg aattatcaca catagatgag gcagttctag
     2221 aacctgaatt atacaaacct gatgaaaata gatggtatcc tatggcagac atgaaagtag
     2281 acaggttata tcattctaat gcattattgt taccagatgg tcgtgttatg actgcaggaa
     2341 gtaatccaga gaggggcatg aatgaactac gaattgaaat ctttaatcca ccttatctct
     2401 ttcaggggga acgacctcaa ataaataagg tttcttctga gaagataaca tatggaagct
     2461 cttttgaaat tgaaactaac aaccatcaag ctgagaatat tttatcagtt gcattaattc
     2521 atcctactgt aactactcat tgtgttaatg ttgaccaacg atatataggg ttagaatttg
     2581 ataaaattga ttcaaagagt cttaaatcat caattccggt aaataaaaat atagttccac
     2641 caggctatta tatgcttttt ataataaata aaaataaaat accttcagtg gctagatttg
     2701 tttgtattaa ttaaatgatt ttttccttgt atctatgaac aatagattat tattcaaata
     2761 tatttttgac tgttctatta aattatatta atagtatttc taactatgat tattgagata
     2821 atatacttta ctggcaatta tcaaataaat ttaaaagaac aaaaactata tttcatagct
     2881 tagtcggctt ttctctcagt tggtccttct tctatcttag ttggtccttc ttctatctta
     2941 gttggtcctt caaagcgact tttgcctgtt aatgtattaa cataattcgt tgtataagag
     3001 agtagcattt tatttaattt gtttatctca tctatactta tttttttatt tttagtttca
     3061 ccactcgata aaaatataga ggaatgatag tcagatattg tctcaaaagt cagataatgt
     3121 gatttgtata tcatctctgt tatagctaga ttggttaatg attgttgtat atatctctga
     3181 gatttataga agaataaagt aattaatgaa gcaattccag ctcctccact gattaatccg
     3241 gtgatatcag gtaatttatt atcattatct tttgtaccat tattatctat cggtaattgt
     3301 tggtttgtgt tagaatctga attatcaaaa taaaatgatg aataggtatg ataaatcaat
     3361 gcatatgcta ttaatactat acccaaaata actattattt tattaatctg tttatttata
     3421 taatatgtcc ctaccgaagc atcaaatact ttaataaatt gcgcatctag tgttctccac
     3481 cattttttcc cctcctctgg ttctctgaga ggtaatgctt ttgttttatt ttgtaaatgt
     3541 tgagagttat caaaattcaa tgactagatt attgttaata actattttaa attatcggtt
     3601 aaatgggatc tgttaactca agatgagttc acctctattc gcaactgata ttttatttct
     3661 aatttttgta ttataaatat atagataaac aatcttatcc aattgtatgc atattctcaa
     3721 tcataatttt tttctttttg tagttaatat atcgatagta atcatcaaaa cattccgtcc
     3781 tacctttaaa gtattgcatt acttgttcaa taaaactttt ctctaaagga gaatggtagt
     3841 gttaagttaa tgacttgtat cacctcctac aagatacatc aataatcgaa attttagatg
     3901 agatctcctt ataccattgt gcataaatac aaataattga atccaattgt agacatgtga
     3961 tagattacag tcaaattttc tacaaggata acaatcatca aattgttctg ttctatcttt
     4021 tacatattca atggctcttt caattatact cttttcataa ggtgaatgta acctgtgttc
     4081 caatctcaaa gaagtacagg cttcaggata ccaactacca cca
//
LOCUS       DATIAS010000123         4766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1658187, whole genome shotgun sequence.
ACCESSION   DATIAS010000123 DATIAS010000000
VERSION     DATIAS010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4766
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1658187"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..272)
                     /locus_tag="VLA74_02425"
     CDS             complement(120..272)
                     /locus_tag="VLA74_02425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49592.1"
                     /translation="MDRKIWLILIFTWIIIASTYLAIKISIDTIPPLLMSGIRYTISG
                     LMGVVA"
     gene            497..1075
                     /locus_tag="VLA74_02430"
     CDS             497..1075
                     /locus_tag="VLA74_02430"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF49593.1"
                     /translation="MSLRNTSKALVIFRVKKRSYVSIWNWIQKFSQYPLYKRKRISAF
                     IIDETVIQIGWKNYYLWIAIEPVHKTLLGIHISEENNMLVARQFLQSLIVKYGKHSVY
                     TDGGTWYPEACKVLKVKHYIHSSLEKSLIERIIQYFKDRTESFDDYYPCRKDDNCNID
                     HVYNWIELFVSMYNNTIVTKNNFILIKEVLIS"
     gene            1168..1578
                     /locus_tag="VLA74_02435"
     CDS             1168..1578
                     /locus_tag="VLA74_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49594.1"
                     /translation="MEDLINNHYPRIKTAWEETWNFYNEKVINHQDLRDHFHKIFEET
                     FKQNNLDINEFKIWRIIEYFLLKREYKENNLSIFTYHSYSHVINLGEWSHKKIYESEN
                     LDTINSVKNILDQIFKKIIQLEDVKEKLKMKLKC"
     gene            complement(1751..3469)
                     /locus_tag="VLA74_02440"
     CDS             complement(1751..3469)
                     /locus_tag="VLA74_02440"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSF49595.1"
                     /translation="MAETSSQLLIVSSYGGMQLIYNDFLNSYRKILDKYKRRESKGGI
                     KWICNIQKESLEIVKKFLDMGMQIRHVKNLPPMNFALGDREINATIEKMEKGKIVQSL
                     LTSNEPLYIKHFHSIFENLWYSGIDAIDRIKELEQDIESEGIEIIRNPFEVQKLVFDL
                     LRSAQEEILIVFSTANAFHRQEKAGSIKLLTEIAFKKGNNVNIKILTPFDSRLQNTKI
                     ELENVKIEDDDDNQIEEKDDYKKRQIEDVLEEEKNNHHQQQHSKKIQIKFIESQSQTT
                     VSILIVDRKYSLVVELKDDTKDTFLEAIGLVTYSNSKSTVLSYVLMFETLWLQTELSD
                     LLKIQDKIQKEFINVAAHELRTPIQPILGLSGLLYSQIENKEQRKVLEVIITSAERLQ
                     RLTNDILDVAIIETGTLQMKKERFNLYDLISNLISHYKTSSSSRNIETKNVNFLYIAE
                     EQNLTIEADKRLLCQVLDNLLSNAIKFTKRIDDDTAIITITTKRGESNDNNNIIVSVK
                     DNGIGIDQEIMPRLFSKFATKSEGGTGLGLFISKNIIKAHGGKIWAENNKNGKGATFR
                     FTLPIS"
     gene            3921..>4766
                     /locus_tag="VLA74_02445"
     CDS             3921..>4766
                     /locus_tag="VLA74_02445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49596.1"
                     /translation="MNNKIVSLTKKRISAIFLATVLIAGTIALSFPSFMTIGTAQAQQ
                     YYEMDNDYNSYEPEYPSYKPDYKPQYPSYGKDDRDKSNKDNSKSVSINKLKCINTNLN
                     INGNNAGNISIGNKRQGYLGANSYDGAGYYDGHNNNKQDKGFDCIINNNNTNTNIVST
                     IPTEPTTTATLTVKKQVFGCYTPSGSVIMNCQELQNNSPAWLSCDDPTISTTSFCQNL
                     QENFFDIEVLDEQDNKIQQFQGSQQGTTIQNLEPGTYTVNEIEYPIVPPPNLPTLNQL
                     SEGDEF"
BASE COUNT         1676 a          706 c          656 g         1728 t
ORIGIN      
        1 tagatggtaa tacaaccagt aaccatcttt tctcttgtgt ttgatactca caagggaaca
       61 taccctttct aaactaaaac aaaaatcatg aaattctatt taccgattgt taaactgaat
      121 taggcaacaa cccccattaa acctgaaatt gtgtatcgaa ttcctgacat tagcaaagga
      181 ggaattgtat caattgaaat ttttattgca agatatgtag atgctataat aatccatgta
      241 aatattagta ttagccatat cttgcgatcc aattaaatat aaaaatagat ataccaggag
      301 gattctgtaa acttatcggt tgattcatct ttttctattt gtaatattag atttattagt
      361 gctgttaact tatggaaaaa gctatagtcg tgaacgttct attctaacat acatatatct
      421 tgttaagatt tgtcagaaat agaacatcca ctattattat agttttatac tctctttgta
      481 tttgtacttt cttggtttga gtttaagaaa tacctccaaa gcattagtaa tctttagagt
      541 taaaaaaagg agttacgtgt ctatatggaa ctggattcag aaattcagcc aatatcctct
      601 ttataagagg aagagaattt ctgctttcat aattgatgaa actgttattc aaattggctg
      661 gaaaaactac tatttgtgga tagcaataga acctgtacat aaaacattac tcggaataca
      721 catttcagag gaaaataata tgcttgttgc tagacaattt ctgcaatcat tgatagtaaa
      781 gtatggtaaa cacagtgttt atactgatgg tggtacctgg tatccagaag cttgtaaagt
      841 actaaaggtg aagcactata tacattcatc actggaaaag agtttgattg aaaggataat
      901 acaatatttt aaggatagaa ctgagtcttt tgatgattat tatccttgta gaaaagatga
      961 taattgcaat attgatcatg tgtataattg gatagaacta tttgtatcaa tgtacaataa
     1021 tacgatagta acaaagaata attttattct aataaaggag gtattaatct cttaagttaa
     1081 cagaaccgta cagatactat ccattcagat gatccacata aggatgcagc attaaattca
     1141 tcacaagtat atattgatcg tattctaatg gaagatctta ttaataatca ttatccaaga
     1201 ataaaaacag catgggagga aacttggaac ttttataatg agaaagtaat aaatcaccaa
     1261 gatctcagag atcattttca taaaattttt gaagaaacat ttaaacaaaa taatttagat
     1321 ataaatgaat ttaagatttg gagaatcata gagtattttc ttttaaaaag agaatataaa
     1381 gaaaataatt taagtatctt tacataccat tcttatagcc acgttattaa ccttggagaa
     1441 tggagccata agaaaattta tgaatcagaa aatttagata ctattaattc tgtaaaaaat
     1501 attttagatc agatttttaa aaagatcata caattagaag atgtaaaaga gaaattaaaa
     1561 atgaaattga aatgttgatt aaataaacta ataatgatat actttaactt ttaaaactta
     1621 acttttacaa taatctgttg taaggaaatt gtaatcgtta aaaattatag aatatttatt
     1681 ttatatttat tattttatta gatttgccaa attgatttca taattataga tagaatcaga
     1741 ttacatgtta ctatgaaatt ggcagtgtaa acctaaatgt tgctccctta ccatttttgt
     1801 tattttcagc ccatatctta ccaccgtgtg ctttaataat attttttgaa ataaagagac
     1861 caagacctgt gcccccttcg gattttgttg caaacttgga aaaaagtctt ggcatgattt
     1921 cttgatctat accaatgcca ttatctttta cactaactat gatattatta ttatcattgc
     1981 tttctcctct ttttgtagtg atagtgataa tagcagtgtc atcatctatt ctttttgtga
     2041 atttgatagc attagacaag agattatcta aaacttgaca taataatctt ttgtctgctt
     2101 caatagtcaa attttgctct tctgcaatat acaagaaatt tacattttta gtttctatgt
     2161 ttctactact actgctagtc ttatagtgtg aaataagatt tgatattaaa tcatataggt
     2221 taaatctttc ttttttcatt tgtaaggttc cagtttctat tattgctaca tctaaaatat
     2281 cattagtaag tcgttgtaat ctttctgcac ttgttatgat gacttccagt acttttctct
     2341 gttctttatt ttcaatttga gaataaagaa gacctgacaa tccaagaatt ggttgtatag
     2401 gtgttcttaa ttcatgagcc gctacattta tgaattcttt ttgtattttg tcttgtattt
     2461 ttaatagatc ggacaattct gtctgtagcc ataatgtttc aaacattaaa acataagaca
     2521 atactgttga tttgctatta gaataagtta ctaatcctat tgcttcaaga aatgtatctt
     2581 tagtatcatc ctttagttct acaactaagg agtattttct atcaactatg agaatggaaa
     2641 ccgttgtttg tgattgactt tcaataaatt taatctgtat ttttttggaa tgttgttgtt
     2701 gatgatgatt atttttttct tcttctagta catcttctat ttgtcttttt ttgtagtcat
     2761 ctttttcttc tatctggtta tcatcatcat cttctatttt tacattctcc aattctattt
     2821 ttgtattttg taatctactg tcaaaaggtg tcagaatttt gatatttacg ttattgcctt
     2881 tcttgaatgc aatttcagtt aataacttta tagaccctgc tttttcttga cgatgaaatg
     2941 cattagcagt agaaaatact atcaatattt cctcttgagc cgatcttaaa agatcaaaga
     3001 caagtttctg aacttcaaaa ggatttcgga taatttctat accttctgat tctatatctt
     3061 gttctaactc ttttattcga tctatagcat caataccact ataccataaa ttttcaaaaa
     3121 tggaatgaaa atgtttaata taaagaggtt cattacttgt taaaagactt tgtactattt
     3181 tgcccttttc catcttttct atggttgcat ttatctctct gtcacctaag gcaaaattca
     3241 taggtggtag atttttaaca tgacgaattt gcattcccat atctaaaaat tttttaacta
     3301 tctctagact ctctttctgt atattgcaaa tccattttat ccctccttta ctttctcttc
     3361 ttttatattt atccagtatt tttctgtaag aattcaaaaa atcattgtat attaactgca
     3421 ttcctccgta agatgaaaca attaacaatt gagaggatgt ttcagccaaa tgaataattc
     3481 tagccctaat ttcatctatg ttttctaaaa ttttggtttc atagtttgat atttttcttt
     3541 cactttctcc tctaatgttt tttgtttagc agaattttca attttttata actatatact
     3601 atattcaatc ccttttattt tctttgatgt caagagaaat attataatga gtgtgctcaa
     3661 aactacttta actttgtaaa caagattgga aaaacttatt ccaaccaata aattttttta
     3721 tttaacttat tatgatatta aaaataataa agttaaaaga tagatctagt aacaatctac
     3781 tagacgatat agagatatgt tcccaataaa aagaatagag aatatctatc aagaactcta
     3841 tcgatactac tcacaagtta ttgcttttca aaatgaaact tctcaatatc agatataatt
     3901 tagtcttgta tatctaaata ttgaataata aaatagtatc attaacaaaa aaaagaatta
     3961 gtgccatatt tttggcaact gtactaatag caggaacaat tgctctatca ttcccatcgt
     4021 ttatgacaat aggtacagca caagcccaac aatactatga aatggacaat gactacaata
     4081 gttatgaacc agaatatcca tcttataagc ccgattacaa gccacaatat ccatcatatg
     4141 gaaaagatga cagagacaaa tcaaataaag ataatagtaa aagtgtcagt ataaataaat
     4201 taaaatgtat taataccaac ctaaatatca acggtaataa tgctggaaat atcagcattg
     4261 gtaataagag acaaggatac ttaggtgcta attcatatga tggtgcagga tattatgacg
     4321 gacataataa taacaaacaa gataaaggct ttgattgtat aattaacaac aataatacta
     4381 acaccaatat agtatcaaca ataccaacag aaccaacaac aacagcaaca ttgacagtaa
     4441 agaaacaagt ctttggttgt tatactccca gcggttcagt cataatgaat tgtcaggagt
     4501 tacaaaataa ctctccagca tggctttcat gtgatgaccc tactataagc acaacatcat
     4561 tctgtcagaa cttgcaagag aatttctttg atattgaagt tctagatgaa caagataaca
     4621 agatacaaca atttcaagga tcacagcagg gaacaacaat acagaatcta gaacctggaa
     4681 cgtatacggt taatgagata gaatatccta ttgttcctcc tcctaatctt cctactttaa
     4741 atcaacttag tgaaggggat gaattt
//
LOCUS       DATIAS010000124         3181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1249243, whole genome shotgun sequence.
ACCESSION   DATIAS010000124 DATIAS010000000
VERSION     DATIAS010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249243"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..484
                     /locus_tag="VLA74_02450"
                     /pseudo
     CDS             125..484
                     /locus_tag="VLA74_02450"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
     gene            788..1639
                     /locus_tag="VLA74_02455"
     CDS             788..1639
                     /locus_tag="VLA74_02455"
                     /inference="COORDINATES: protein motif:HMM:NF017539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NACHT domain-containing protein"
                     /protein_id="HSF49597.1"
                     /translation="MDYELRKRRILFSDNYQIEDDENEERKDNEKIIKKIKPDDLLKS
                     GKKTTIIVGAPGSGKTTLLKYLVHKTLQQQKEYFNIYLELKSIQRQHFNDTDRFEDII
                     FSEAIASPLGIDDKERKSIHKKLRDKLIDGKIAFFLDGLDEMRTIDNDPHKISLRDLF
                     NKFIEMDIIHNNLVIVTTRPYALKEVFERVQEMEIAPFNMEQIKQFINHYYSEDNPNS
                     KNFLKDLSTRTEIQELARVPLILGFLLQDYIESRSFSENKLDLYKNIVTRLNNKLDEE
                     VLSVILR"
     gene            1717..2763
                     /locus_tag="VLA74_02460"
     CDS             1717..2763
                     /locus_tag="VLA74_02460"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSF49598.1"
                     /translation="MNRFVFTDNKILDEVKKYCNDHPHLNADYLFEDIKATALLREIG
                     NDRYAFTHLTIQEYLAATILVKDENLAKLFCQAYFDPIICEMEVLPMTLGLYQYNVNA
                     NKENLYGLLEKLPESLNFANLRLRAKGLSYFKVNEKYVSQLADRLIEFIIDKNIDERI
                     YKEIVINAFSGLCNKNRELISRRLSELLNYDKLSLAFFSISNIIYALVQLQAKEAIPE
                     LIPLLKHEDSGIRRDVATALGQLQAKEAIPELIAMLRDEDSSICRDVAIILEQYDRNL
                     LINGILLGLSHNDVFVRKKSISVIGYYSFDENIKKKLEEITTTDPYEEIRNIANIELE
                     KLQLKLSLSESSSN"
BASE COUNT         1282 a          403 c          489 g         1007 t
ORIGIN      
        1 acaattctac ctttagaaat gaaccagata ttggaaaagc agtatctgac tggacataca
       61 actacaatga gaaacatggt agaaggataa ctgatatttt acagatagga gtaatgagta
      121 tgactacata actgttaagg cgacgatatt aaaagatgaa aaaaatcatc aatatgtaga
      181 tacaataaat gatatagcgt ttttacagat acagaaaaaa gaccaagaag aactgaaaaa
      241 taatggacaa gaattagttc cgttaccact aagtaaatct gttttacgta cacacaaatt
      301 catatctcat ggattcagaa agaatgacca gtttaaacca gggttaggtt cagatggatc
      361 cattaaaagt aaaactaaat atcaattaga tgcggaaaca gaaattccaa taattcaact
      421 ttcttcaaag aaagtagaag aaggtatgag tggaagtcca gttcttgata ttgaaacaaa
      481 aaaaataatc ggaatgttag acatgattta tgataaaaaa gatattactg atcctgatct
      541 taatctttat gaaagtctat ctgaaaaaaa tcctggactt aatcttcgat ttttagatga
      601 taatcaagca atagaaaaaa tactaaacaa ttacacaaat ttactagaaa aaaaagtatc
      661 taaaataaga ttgttaggag acaacaaaga atatgatctg acagatgtct ttgtagatct
      721 tataattaat gaacaatacg atagaccatc tttttctgtt aaatcattag ataaatacaa
      781 aggtatgatg gattatgaac tacgaaaaag gcgtattctt tttagtgata attatcaaat
      841 agaagatgat gaaaatgaag agagaaaaga caatgaaaaa ataattaaaa agattaaacc
      901 agacgatctc ttaaagtcag gaaaaaaaac cacaattatt gtaggagcac ctggcagtgg
      961 caaaactaca ctattgaaat atttagttca taaaacttta cagcaacaaa aagaatattt
     1021 taacatttat ctagaattaa aaagtataca acgacaacac tttaacgata cagatagatt
     1081 tgaagacata atcttttctg aagcaatagc atcgccttta ggaattgatg ataaagaaag
     1141 aaaaagcata cacaaaaaat taagagataa actgattgac ggaaagattg catttttctt
     1201 ggatggatta gatgaaatga gaacaataga caatgatcct cataaaatat cattacgaga
     1261 tttattcaac aaatttattg aaatggatat catacacaat aatctagtga ttgttactac
     1321 tcgtccatat gcattaaaag aagtatttga acgagttcag gaaatggaga ttgcaccttt
     1381 taatatggaa cagatcaaac aattcatcaa tcattactat agtgaagata atcctaattc
     1441 taagaacttt ttaaaggatc tatcaactcg tacggaaata caggaactgg ctagagttcc
     1501 gctaatactc ggatttcttt tacaagacta tattgaatct agatcctttt ctgaaaataa
     1561 attagatctt tataagaata tagttactag actaaataat aaattagatg aagaggtatt
     1621 aagcgtaatt ttaagataac aaattcaata catagacatg gaattattac gaatcttgca
     1681 ttttctggat tattcaattt taatgaggat gaaatattga atcgatttgt atttactgat
     1741 aataaaattt tagacgaagt aaaaaaatat tgtaatgatc atcctcatct taatgctgat
     1801 tatctgtttg aagatataaa ggcaacagca ttgttacgag agattggaaa tgatagatat
     1861 gcatttactc atttgacaat tcaggaatat cttgctgcaa ccattttagt taaagatgaa
     1921 aatcttgcta aattattctg tcaagcatat tttgatccta ttatatgtga aatggaagta
     1981 ttacctatga cgcttggtct atatcaatat aatgttaatg cgaataaaga aaatctatat
     2041 ggattattag aaaaactacc cgaatcacta aattttgcca atttacgttt acgtgctaaa
     2101 ggattaagtt atttcaaggt taatgaaaaa tatgtttcac aattagcaga taggctaatt
     2161 gaatttataa ttgacaaaaa tatagatgaa agaatttata aagaaatagt aataaacgct
     2221 ttttcaggtt tatgtaataa aaatagagaa cttatttcta ggcgattatc agaactctta
     2281 aattatgaca aactatctct cgcatttttt tctattagca atataatcta tgccttagta
     2341 caacttcagg ctaaagaggc aataccggaa ctgataccct tgctaaagca tgaggattct
     2401 ggaatacgtc gtgatgttgc tactgcctta ggacaattac aggctaaaga ggcaataccg
     2461 gaactaatag ccatgctaag agatgaggat tcgtctatat gtcgtgatgt tgctattatc
     2521 ttagagcaat atgatcgtaa tctactaata aatggtattt tattaggtct ttcacataat
     2581 gatgtatttg taagaaagaa atcgatatct gttattggat attattcttt tgatgagaat
     2641 attaagaaga aattagagga aattacaaca accgatccct atgaagaaat tagaaatata
     2701 gcaaatatag agttagaaaa attacaatta aaattgagtc tgagtgaaag cagtagtaat
     2761 taagtttcca tataatatat taaaacttta aatttaagta acatattaat ttaataaaga
     2821 tttatttaaa aaagggggta gttgttttat aattaatatt attatataaa taaattaaca
     2881 gtctaatcca aatagattat acttatatcc ataatttatt tatgtgacta tagatattaa
     2941 gcatcaaaaa cattttatct atctatagat actgtattac agaagcatca aaaacatttt
     3001 atctatctat agatactgta ttacagaagt cttttctaag agatgctctg ttgcctaaat
     3061 catatgaata acaattttta ttctaacaat atatagtcat tttatggtta tagtttgaaa
     3121 caggttatac aaagatgctt ttagcatcat ttcctttatc atgttctcaa atctgatagc
     3181 a
//
LOCUS       DATIAS010000125         3479 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1249266, whole genome shotgun sequence.
ACCESSION   DATIAS010000125 DATIAS010000000
VERSION     DATIAS010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3479
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249266"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VLA74_02465"
     CDS             <1..406
                     /locus_tag="VLA74_02465"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HSF49599.1"
                     /translation="NSFENLKVGDIIVFNRPDGADRVIVHRIIDITDKFGEKIIVTKG
                     DANDGIIPGTDFPIREKDYIGKVEKAELPYVIPKVGIVLKYINPPVNYIIIAGIIGAL
                     IYTNLRKKKHENKNIDNNENSMSSNDENTGNR"
     gene            complement(443..1564)
                     /locus_tag="VLA74_02470"
     CDS             complement(443..1564)
                     /locus_tag="VLA74_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSF49600.1"
                     /translation="MGIPEKIKAIEDEIHKTQINKATEFHIGLLKAKIAKLRRDLEEN
                     KHGRTVSSGKGSAGYDVKKEGDATVVLIGFPSVGKSTLLNALTNANSRIASYQFTTLT
                     AIPGMMNYRGAKIQIIDLPGIIKGAASGKGMGKKVLSVARNADLVLVIVDVFHPHHYS
                     ILIKELSEIGIKVNKKPPHVLVAKTERGGVSVSSDSSIQVPEPLVREMCKIYGIHNGR
                     ITIREKNFTTDDLIDVLSENRVYPQCITVLNKIDLIDNNNLNEIVKKFPDTFIPVSAD
                     STKNIEKLKESIFQKLDFIRIYMRPKGKETDFEEPLIVRKGTRVKDICGKLHRNLLRD
                     FKFALVWGNSVKFEGQKVGLDHILTDQDILTIIKKINAV"
     gene            complement(1608..2159)
                     /locus_tag="VLA74_02475"
     CDS             complement(1608..2159)
                     /locus_tag="VLA74_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49601.1"
                     /translation="MSEFLTRYPRKINILKGLQESIKFEDIQFDHLSLMVKIRKDEIV
                     QTLIAEGFKKVNFENKKPGQIGHGFAKRLKKPWEIHVRLLEINHGLIALQGEVEISRK
                     YIQHIRSVRCPVIYEIESILKKHKIEYKIWNAKVRDYITHVIDNHQIILDSPKLPAMP
                     WILMMVSGSLIAIMHGLKFFRIF"
     gene            complement(2223..2981)
                     /gene="cofE"
                     /locus_tag="VLA74_02480"
     CDS             complement(2223..2981)
                     /gene="cofE"
                     /locus_tag="VLA74_02480"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HSF49602.1"
                     /translation="MIEIYSLKIKTKKKTLFNLPNVIESTDFIFKEGDVIVISSKFVS
                     MSEGSLVDLSTVKVSKEAKKLAKQYYMDPRFVEMVIRESDIIFGGLPGFLLSIKDGIL
                     APNAGIDKSNVPENYVICLPKDPFMTAENIRTHFLVNHGLKIGVIISDSRLMPTRIGT
                     IGVAIGCSGIEPVEDLRGKKDLWGKKIKYTLKASADCFATMGTFMMGESDESIPIVVI
                     RGSNVPLTDRRLTWKNLAIDYNNDIYLRGYKPLA"
     gene            3081..>3479
                     /locus_tag="VLA74_02485"
     CDS             3081..>3479
                     /locus_tag="VLA74_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSF49603.1"
                     /translation="MNITEKILARASGKSIVSPDDVVIANIDKVMMHDVSGPGVIKVF
                     SEWEKKGIKLEHVWDPDKVWITEDHFVPASDTISANNISLLSNWSKKYNIKKHYKYGL
                     GQYGICHTLSHEEGLILPGEAYVGGDSHTNT"
BASE COUNT         1114 a          603 c          531 g         1231 t
ORIGIN      
        1 aaattctttc gaaaatttga aagtcggtga tattatcgta tttaatagac ctgatggtgc
       61 agacagagta atagttcata gaataattga tatcaccgat aaattcggag aaaaaattat
      121 agttacaaaa ggcgatgcga atgacggaat tattcccgga acagactttc ctattagaga
      181 aaaagattat ataggaaaag tcgaaaaggc tgagttgcct tatgtcattc caaaggttgg
      241 catcgtatta aaatacatta acccgccagt gaattacata ataatagctg gaataattgg
      301 tgcattgatt tatacaaatc taagaaagaa aaaacatgaa aataaaaata tagataacaa
      361 cgagaatagc atgagcagta atgatgagaa tactggaaat agatgaggat tctcgagtaa
      421 tgatgaggat atgaattacc tgctatactg cgttaatttt tttgataatt gtcaagatat
      481 cctgatcagt caagatatga tccaaaccca ctttttgtcc ttcgaattta acactattgc
      541 cccacactaa tgcgaattta aaatctctaa gcaaatttct atgtaattta ccacaaatgt
      601 ctttcactct tgttcctttt ctcactatta gtggttcttc aaaatcagtt tcttttccct
      661 ttggtctcat atatatcctt ataaagtcca atttttgaaa aatagactct tttaattttt
      721 ctatattttt agttgaatct gctgaaactg gaataaaggt atctggaaat ttttttacaa
      781 tttcattcag attattgtta tcaatcaaat ctattttatt cagaactgtt atacattgcg
      841 gatacaccct attctcagat aatacgtcaa tcaaatcatc ggtggtaaaa tttttctccc
      901 tgatagttat tctgccatta tgtatgccat aaattttaca catttccctg actaatggtt
      961 ctgggacctg tatactggaa tccgagctta ccgatacacc gcctctttca gtttttgcaa
     1021 ccagaacatg gggtggtttt ttattaacct taataccaat ctctgataat tctttaatta
     1081 aaatagaata atgatgtggg tgaaaaacat ctacaattac taaaacgaga tcggcattcc
     1141 ttgctaccga taagaccttc ttacccattc ctttccctga agcagcaccc ttaattatac
     1201 caggcaaatc gattatctgt atctttgctc cgcggtaatt catcatacca ggaatagcag
     1261 ttagtgtcgt aaattggtat gaagcaattc ttgagtttgc atttgttagg gcattaagaa
     1321 gggttgattt tccaacactt ggaaatccta tgagaaccac tgttgcatca ccttcttttt
     1381 ttacatcata tccggcactt cctttgccag atgataccgt tctcccgtgt ttattttcct
     1441 cgagatctct tcttaatttt gcaatttttg cctttaaaag acctatatgg aattccgtag
     1501 ctttatttat ttgtgttttg tgtatttcat cttctattgc tttaattttt tcaggaattc
     1561 ccatttctac aataatataa tgatcataga caattaaaaa atcttatcta gaaaattcta
     1621 aaaaatttca atccatgcat tatggctatt agcgaacctg ataccatcat aaggatccat
     1681 ggcatagcag gtaattttgg agagtcaaga ataatctgat gattatcaat aacatgagtt
     1741 atataatccc tgactttagc attccagatc ttgtattcta ttttgtgttt tttcaatata
     1801 gattctattt cataaatcac aggacatctt actgacctaa tatgttgaat atatttcctt
     1861 gaaatttcaa cctctccttg aagtgctatt aaaccatgat ttatttctaa aagtctgaca
     1921 tgtatttccc aaggtttttt caatctcttg gcaaagccat gacctatttg tccaggtttc
     1981 ttattttcaa aatttacctt tttaaatcct tcagctataa gagtttgaac tatttcatct
     2041 tttctgatct ttaccatcaa actcagatga tcaaattgta tatcttcgaa ttttattgat
     2101 tcttgtaatc cttttaatat atttattttt ctaggatatc tagtaaggaa ctctgacatt
     2161 cggttaataa aattttgagg tcatagttat attaaaatgc tatgctgata atacaactat
     2221 tctcaagcaa gaggtttata tcctctaaga taaatgtcgt tattgtaatc tattgcaaga
     2281 ttcttccaag tcaatcttct atcagttaga ggtacatttg aaccacgaat aacaactata
     2341 ggtatagatt cgtcactttc tcccatcata aatgttccca tagttgcgaa gcaatcggca
     2401 gaagccttta gagtatattt gattttttta ccccagagat ctttttttcc tcttaaatct
     2461 tcaacgggtt caattcccga acatccaata gctacaccga tagtacctat ccgtgttggc
     2521 atcaacctac tgtctgaaat aataacacca atcttcaatc catggtttac aaggaagtgt
     2581 gttctaatat tttcagctgt catgaacgga tcctttggca agcatattac ataattttct
     2641 ggaacattag atttgtctat acctgcgttg ggagctaaaa taccatcctt tatggaaagc
     2701 aaaaatcctg gtaatccacc aaatataata tccgattctc tgattaccat ttcaacaaat
     2761 ctagggtcca tatagtactg cttcgcaagt ttctttgcct ctttactaac ttttacagtt
     2821 gaaagatcaa ctagagatcc ctcactcata gaaacaaatt tacttgaaat aactataaca
     2881 tctccctctt taaaaataaa gtcggtcgat tcaataacat ttggtaggtt aaaaagagtt
     2941 ttttttttag ttttaatctt taaagaatat atttcgatca attcaatatt tatgatataa
     3001 ttaatatagt tacattttta tttttttaga aagtattaat tcttagaaac tgaaattttg
     3061 gttgaaaaaa gaaaatggga atgaatatta ctgaaaaaat attagccagg gcatcaggta
     3121 aatctattgt ttcgcctgat gatgtagtaa tagcgaatat agacaaggtg atgatgcatg
     3181 acgtttctgg ccctggtgtc attaaagttt tctccgaatg ggaaaagaag ggtattaaat
     3241 tagaacatgt gtgggatccg gataaagtat ggatcaccga agatcacttc gttcctgcat
     3301 cagatacaat atctgctaat aatatttcac ttttatctaa ttggtcgaag aaatacaata
     3361 ttaaaaaaca ctataaatat ggtttaggcc agtatgggat ctgccataca ttatctcatg
     3421 aagaaggttt gattttgcct ggtgaggcat atgtaggtgg tgattctcac acaaatact
//
LOCUS       DATIAS010000126         5339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_977560, whole genome shotgun sequence.
ACCESSION   DATIAS010000126 DATIAS010000000
VERSION     DATIAS010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5339
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977560"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            430..1425
                     /locus_tag="VLA74_02490"
     CDS             430..1425
                     /locus_tag="VLA74_02490"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF49604.1"
                     /translation="MDNITDRLLPSSQVVERFPMISNQKFNKPPIAEHGFSALLQISY
                     IYKNEKLINKFLFDTGVSENGVIYNSDIFGINFGDIETIVLSHGHFDHFSGLVSVLKR
                     INKPTKIIMHPDALLKRWIVFPNGNKAKMDTLNEETIREVKGIIIKRSGVNYLPYEKK
                     IMNNNEKDYEYNNHQYNNGNKRILITGEIPRITSFEKGFPLQYKEATDESNLLIPDPL
                     VKDDQALVMNLKNKGLVILSGCGHAGIINTIKYATKVTGIKKLFAVIGGFHLTGEGYE
                     KAISLTINELKTIDPKYIIPCHCTGWKASNEIIKEMPHKYLQTSVGSTFAFNSLG"
     gene            1888..2337
                     /locus_tag="VLA74_02495"
     CDS             1888..2337
                     /locus_tag="VLA74_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49605.1"
                     /translation="MINKKIVLASITMIVAAGLLALNPSMMGNAQAQMYDNQYGYDNN
                     YYQDDNRYSYDKKDPKSTHVDIQKIKCVNSNVNINGIDKTEIPQEANTLAAANEAGEG
                     PDGTNTQNGNGLGDRINVERNLVNICVNLNFNNQERVPFLLDSMGLN"
     gene            2858..3418
                     /locus_tag="VLA74_02500"
     CDS             2858..3418
                     /locus_tag="VLA74_02500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49606.1"
                     /translation="MDYDDEEYEKKMLIDFLKLTKERFHILIDNENGDLRTIISDDMR
                     PLLPFYERTYKDVEKDIDRCMEIIPNIPYGLLVRHGFTNNHLILKLIQVDICWINIVT
                     IRKDPLRNFDEIYKDQNEPSKEEKAKWENFKDKLRRNWYKFLRATDSCIFESLNDIIN
                     AIPGQSGIFAMVKGWKNSVEIAIEEI"
     gene            complement(3750..4355)
                     /locus_tag="VLA74_02505"
     CDS             complement(3750..4355)
                     /locus_tag="VLA74_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49607.1"
                     /translation="MIGKAPGFFSGEGLTGVDEQYRYFFRLLFRMGTIVGNILFGLAF
                     FMIVKSLVSSKLKDYLIIAAIGDTMVGISLFTSAIQPTYGVAAHSLVMLSSYLFSFGL
                     YLSAISISNDISLRKSIRGSMNNLASNIGTAQMEQEIERKVKKIIQKQQKEMQKQVGD
                     FSYEVTEDNLRDYVKLAIEERDTIDDHWRKKRFDEDNSKRA"
     gene            4959..5270
                     /locus_tag="VLA74_02510"
     CDS             4959..5270
                     /locus_tag="VLA74_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSF49608.1"
                     /translation="MSESQIFDIDTFLSNFPKSNYFIDVMNTPTMQVGIINLKKNQED
                     TQEPHVSDEVYYVISGSGTIDIDGIKNEVNAGKIIYIPKKIPHSFHAISKELVVLYIL
                     V"
BASE COUNT         1924 a          783 c          776 g         1856 t
ORIGIN      
        1 gttctgcatc ttttatgatt atgtaaggtg taatagtatg gtacccatct ggtactggat
       61 ttacattagc tgtcatattt gtcataaccg gtgttccttc gatttataaa tttgcctgtt
      121 agattatata gacaacagtc aaaaatatca aaaagttaat ttcggtatgt tactaatcac
      181 attcattttg atagaagaaa ttttttattt actttaaatt acctatctca catgcaatat
      241 ccaaatacat ggaactctga gaaagagaca gaatttaatc gaatttgttt ctgataggag
      301 gcgattgaac tatggaacta aaaactattt aacttttcag aataacgtca tacatattta
      361 ttaaatacct cacaaatata ttttcagagc gtgctccaag aagtcgacaa tataaagatt
      421 acaattttga tggataatat aactgataga ttattaccca gctcacaagt agtggaacga
      481 tttccaatga taagcaatca aaaatttaac aaaccaccaa ttgcagaaca tggtttttcg
      541 gcgcttttac aaatatcata tatatacaag aatgagaaac taattaataa atttcttttt
      601 gatactggag ttagtgaaaa tggtgtcatt tataattcag atatctttgg tataaacttt
      661 ggagatattg aaactatagt tttaagccac gggcattttg atcatttttc aggacttgta
      721 agtgttttaa aaagaattaa caaaccaaca aaaattataa tgcatccaga tgcgttactt
      781 aaacgatgga ttgtatttcc taatggcaat aaagcgaaaa tggatacctt aaatgaagaa
      841 acaataaggg aagtcaaggg cataataatt aaaagaagtg gagtaaatta tttgccatat
      901 gaaaagaaaa ttatgaataa taatgagaag gattatgaat ataataacca tcagtataat
      961 aatggaaata aaagaatatt aataactgga gaaatacctc gaattacatc ttttgaaaag
     1021 ggatttccat tacaatacaa agaagcaaca gatgaaagta atcttcttat tccagatcct
     1081 cttgttaaag atgaccaagc cctggtaatg aatctaaaga ataaaggctt ggttatactg
     1141 agtggttgtg gtcatgctgg aataataaat actataaaat atgctactaa agttacagga
     1201 attaaaaaac tttttgcagt tatcggcgga ttccatctaa caggggaagg gtatgaaaaa
     1261 gccatttctt tgacaataaa cgaacttaaa actattgatc caaagtatat cattccttgt
     1321 cactgtactg gctggaaggc ttctaatgaa ataattaaag agatgccaca taagtatcta
     1381 caaacaagtg ttgggtctac atttgcattt aattcactcg gctaaaacat aataataata
     1441 tttaatatgt tgaaaaaata aaaattgtta aatttgtttt agaaattaca gatgatatat
     1501 tctttgcctg tttcctaatg ttacatttct tatctactac ctaattttta ttgcttttac
     1561 attgtttatg ggttaatctt tcatattctt tctgctcgat actcttatct cctaactcag
     1621 tctataagat ttggcaaaag tatgatttac cttaaaacat aaattttggt gggattacac
     1681 tcaaaaataa agcaagtcta ttactctagc gatattcttt atccttggac cagatccctt
     1741 gttgcttgta cctagatgat ttagtgttac accataacaa caattgctat tcttcttatt
     1801 gtcaatattt cagaatgata acatattaca agatcatata atcttccttc caagcttaga
     1861 tatattaaat tcatatttaa ttttccaatg atcaataaaa agatagttct ggcttctatt
     1921 acaatgatag tagcagcagg tctactggct ctaaacccat caatgatggg gaatgcacaa
     1981 gcgcaaatgt acgacaatca atatggatac gacaataact attaccaaga cgacaataga
     2041 tatagttatg ataaaaagga tccaaagagc actcatgtag atatccagaa aataaagtgt
     2101 gttaacagta acgtcaatat caatggtata gataagactg aaatccctca agaggctaat
     2161 accctagcag cagcaaatga agcaggagaa ggtccagatg gaacaaatac acaaaatggt
     2221 aacggcctcg gagatagaat caacgtagag agaaacctcg taaatatctg tgtcaaccta
     2281 aactttaaca accaagaaag agtacctttt cttcttgatt ccatgggact aaactaaatt
     2341 tatctacttc tcttttttta tttgaattat tgattatttt aataatctag agatattaac
     2401 atcatatttc atattgtaca taccgatcat tttgtatcta tgttattata gttaatttat
     2461 aagttcattt ctgaatgttg aaatactaaa tttgcatata acgttctttc aaaggctaga
     2521 aatatttaat tcgtatgttg tgattcatga tcaatcttta agtgatttta ttatactccg
     2581 catgatttga taacacttca aaattctttt gataaccctt gtttcaaata cctataaatt
     2641 tttcaaaaag tttatgcact atttatacgg atatggtttc ttatcttaat atttgtagaa
     2701 tatttagtaa ttacccaaag aatgaactta tctttgtgat catttaacag atcaagtatg
     2761 acatcggaaa atttatcgag ggcagtttgt tattggcagc acaaatattg agaaataaga
     2821 tcgatatgct ataatactac tttttttatt gcaaaatgtg gactatgatg atgaagaata
     2881 tgaaaagaaa atgcttatag atttcctaaa attaactaaa gagagatttc atattttaat
     2941 agataatgaa aatggagacc tcagaactat aatttctgat gatatgagac ctcttcttcc
     3001 tttctatgaa aggacgtata aagatgttga gaaggatatt gacaggtgta tggagataat
     3061 accaaatata ccatacggcc ttttagttcg acatggattt accaataatc atcttattct
     3121 taaattaatt caggtagata tatgttggat aaatatagta actataagaa aagatccctt
     3181 aagaaatttt gatgaaatat acaaggatca aaacgaacca tctaaagaag aaaaagctaa
     3241 atgggaaaat tttaaagata aacttagaag aaattggtat aaatttctaa gagcaactga
     3301 tagttgtatt tttgaaagct taaatgatat tattaatgca ataccaggcc agtctggaat
     3361 ttttgctatg gttaaaggat ggaaaaattc tgtagaaata gcaattgaag aaatatgaat
     3421 ctttaatact tcacttaata catcaaattc attaaagttg agaaaatttg tacctattat
     3481 ataaaccatc tcaatgtaat gattttacgt ttctacaatt ggaatcttta atacttgagt
     3541 tgtttgatag attgaatttt ctatttgaaa tatgattcta tttctagttt ttatcaacgt
     3601 aattgctttc agccacattc cttttgttac tttctttctt gattatgtta tgaaataagt
     3661 ttttcgatta acctttttat tgttttttct ttctattttg tttgtttaag ttatatctat
     3721 ctttctgtag tatcatggat gttaatatgc taggctcgtt ttgaattgtc ctcgtcaaat
     3781 cttttcttgc gccagtgatc atctatagtg tccctttctt ctattgctaa ctttacataa
     3841 tctctcagat tgtcctctgt aacttcatac gaaaaatcgc caacctgttt ttgcatttcc
     3901 ttctgttgtt tttgtataat cttttttacc ttcctctcta tctcttgttc catctgtgca
     3961 gttccaatgt tactagctag attattcata gatcctctga ttgattttct taaagaaata
     4021 tcatttgata ttgagattgc agaaaggtat agtccaaaac taaacaagta cgaagatagc
     4081 attacaagtg aatgtgcagc aactccgtat gtcggttgta ttgccgaagt aaaaagtgaa
     4141 ataccaacca tagtatcacc tattgctgcg atgattagat aatcttttaa ttttgatgag
     4201 accaaactct ttacaatcat aaaaaaggct agaccaaata gaatatttcc tactatagta
     4261 cccattctaa ataaaagtct aaaaaaataa cgatactgtt cgtctactcc tgttaaacct
     4321 tcaccagaaa agaagcctgg cgcctttcca atcaagtaaa atatcaatgg aagtgataaa
     4381 attatccaaa gtaatatgtg tcagaaatag aacatcctct tttattgtta tggactctgg
     4441 tatccataat ttctcgggct tattgtacga aattattcat aaatcaatga taatacaatt
     4501 gcgtgtactt taacatactc tcttgttatc caatacgtca atagtcatta aagaaataat
     4561 agtatttgaa ccatttcttt ggtgaataat atatattgaa ttaacctacc gatcatgtag
     4621 aattatcttt tactgtttta aaaatcaaat tgtaaatacg gaaagtattt ttatggattt
     4681 ctgctataat tccatcaatt aagtgaatag catgtccata tataaaataa tttctataat
     4741 atatcaatca cagtttatta cataattcag tcaataatca atatatgttc taaataacaa
     4801 gttgactaaa caaaacccga tgtaatacag actcggagat acattaactg ttcttgtcgc
     4861 aatttagttc acaataacta aatgtaataa ggtcatattt ccttttatta taatctaata
     4921 gaaaaaattt tatttgaata ttaaaatatt ttttataaat gtctgaatct caaatttttg
     4981 atatagatac gtttttatca aattttccta aatctaatta ttttattgat gtaatgaata
     5041 caccaaccat gcaagttggg ataataaact tgaagaaaaa tcaagaagac actcaagaac
     5101 ctcacgtctc agatgaagtt tattacgtta tcagtgggag cggaacaata gatatagatg
     5161 gaattaaaaa tgaggttaat gctggaaaaa taatttacat tcccaaaaaa atccctcact
     5221 cattccatgc cattagtaaa gaattagttg ttttatacat attagtataa accacataat
     5281 taggtctttc acaataaaag aataatagta atatttgttt aattattcta tttattgca
//
LOCUS       DATIAS010000127         2624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_432408, whole genome shotgun sequence.
ACCESSION   DATIAS010000127 DATIAS010000000
VERSION     DATIAS010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432408"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..265)
                     /locus_tag="VLA74_02515"
     CDS             complement(11..265)
                     /locus_tag="VLA74_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49609.1"
                     /translation="MLKVFLISISADEENQRDEIPKNIDEYGARRKKEKFIPEFEIRK
                     RVEVVVNDSASQKILQDVKKSGKIHGKVFTYDVSESSDLP"
     gene            complement(677..1177)
                     /locus_tag="VLA74_02520"
     CDS             complement(677..1177)
                     /locus_tag="VLA74_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF49610.1"
                     /translation="MINDTATNNKIAQNHFKKILIGVDGSEKSFEAADYAIKLAENCK
                     SELLLIINILPIDPWYHGEYPYEWGKPEVLEEVYEKEKQEMQKTLNKIKDKADKLNLN
                     SKADVIMTPRTAHPSIVLVDYSERNNVDLIVVGTRGRTGFKKMLLGSVASGVVTYAHC
                     PVLVIK"
     gene            1301..2344
                     /gene="arsB"
                     /locus_tag="VLA74_02525"
     CDS             1301..2344
                     /gene="arsB"
                     /locus_tag="VLA74_02525"
                     /inference="COORDINATES: protein motif:HMM:TIGR00832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HSF49611.1"
                     /translation="MFNKYLSIWVAICIVSGTLLGYFFPWLSTSLSEIEYANVSLPIA
                     IVLLMMMYPIMLKVKYSELLNFKKNAKVMAFTLTINWAIQPFVMASIAWLFMGIIFSS
                     IIPEKLHKEYMMGMIILGLAPCTAMTLVWTYLARANVSCALLQVSINDLIILILYVPL
                     GVLLLGATGFSVPLDTLFVSILLYVAIPLGLAALTRRVTIKTKGEEWLETHLIERIDK
                     ITPIGLLITLVLIFIFQGDKIINYPYHLMLIAIPLLIHTYLIFALGYFGSKKLRISYP
                     EAAPTAFIGASSFFELAVAVATILFGVHSGVTLAITVGVLVEVPVMLSLVQIMKRKRA
                     KFQFDTSEPPNKF"
BASE COUNT          855 a          421 c          352 g          996 t
ORIGIN      
        1 ttttaaaatt ttaaggtaaa tcagaagatt cagaaacatc ataagtaaat accttaccat
       61 gaatctttcc tgattttttt acatcttgca aaattttttg tgaagcagaa tcattaacaa
      121 ctacttcaac tctttttcta atttcaaatt caggaataaa tttttctttt tttctgcgcg
      181 caccatattc atctatattt tttgggattt catctctttg attttcctcg tccgccgata
      241 tcgaaataag aaataccttc aacattattt tgttgtaaaa cctgaattaa tgaagcaaaa
      301 tcactatttc ttatataaaa gatcaatcct ttcatacaaa taatttttat gtggatttat
      361 ttaaccttta tcaaattctt ttgatttaaa tattcttccg acttttttta ttaaaatcat
      421 ttcctaattt ctttttagat ttggatatac atattctgtc tattataaac attaatctat
      481 aagcatgatt aaaaacttat caataactat caataaattc ccatgttaat tattgtgata
      541 ctttattcta aaatatgcta tatggtaagc taaaagagat acacatatgt gacctctctc
      601 ctgctcctgc acaaaaaaaa taaagaactg aaaaaataat aattattatt aattaaataa
      661 ttaataaatg atggcattat tttataacta atactggaca atgcgcatat gttactactc
      721 cactagctac actaccaaga agcattttct tgaaaccagt tcttcctctt gttcctacaa
      781 caattaggtc aacattgttt ctttcagagt aatctaccaa tactattgat ggatgagctg
      841 tacgaggagt cataattaca tctgccttag aatttagatt gagtttatca gctttatctt
      901 ttattttatt taatgtcttc tgcatctctt gtttttcttt ttcataaact tcttcaagta
      961 cttcaggttt accccactca tatggatatt caccatgata ccaaggatct attgggagaa
     1021 tatttataat tagtaacaat tcacttttgc aattttcagc taactttatt gcataatcag
     1081 cagcttcaaa tgacttttca gacccatcta ctccaattag aattttttta aaatggtttt
     1141 gtgctatttt gttattagta gcagtatcat taatcaattt agatacaaga cgataatagg
     1201 attttaaata aaaacttata acatatagac caacaatact atattcataa ctcgaaaaga
     1261 atcacctaaa atttcaaaaa tttatcaaaa ggaacttgat atatttaaca aatatctctc
     1321 tatatgggta gcaatttgta ttgtgtctgg aactttgcta ggatattttt ttccttggct
     1381 atctacttcc ttgtcagaaa ttgagtatgc aaatgtctca cttcctatag caatagtact
     1441 tttgatgatg atgtatccaa ttatgctaaa ggtaaaatat tcagagctgt tgaactttaa
     1501 gaaaaatgca aaggttatgg cttttacttt gaccataaat tgggctatcc aaccttttgt
     1561 aatggcttcc atcgcttggt tatttatggg tattattttt tcatctatca ttcctgaaaa
     1621 attacataaa gaatacatga tgggtatgat aattcttgga cttgcacctt gtacagcaat
     1681 gacacttgta tggacatatc ttgctagagc taatgttagt tgtgcgctac ttcaagtatc
     1741 aataaatgat ctaattatcc ttattcttta tgtgcctctt ggcgtgttgt tgcttggagc
     1801 cactgggttt tctgttcctc ttgatactct ttttgtctca attttactgt atgttgcaat
     1861 accgttggga ttagcggcat taacacgacg agtaacaatc aagacaaagg gagaagaatg
     1921 gcttgaaact catctaattg agagaattga taaaattact cctattgggc ttttgataac
     1981 tctagttctt atttttattt tccaaggtga taagatcatc aattatcctt atcacttgat
     2041 gttaattgca attcctcttt tgattcatac ttatctaatc tttgcattag gatactttgg
     2101 atcaaaaaag ttgaggatat cttatccaga agcagcacct accgctttca ttggagcaag
     2161 tagctttttt gaacttgcag tagcagtagc tacaattttg tttggtgtac attctggtgt
     2221 tactttagca attaccgttg gtgttttggt tgaagttccg gtgatgctgt ctcttgtaca
     2281 aattatgaaa aggaaaagag caaaattcca atttgatacc tcagaacctc caaataaatt
     2341 ttgatactct aaattcatat atataattac atattttact aaatagagca taaaaaatta
     2401 ttcaataaat ggatttcaaa ttaccataca gtaataatac aatgataagt tctgatcttt
     2461 aaatatcata atgtagtttg aaaaaaagtc tatatattga tatgtattcg ttatcctttt
     2521 tttattattt atctttgtta attaatttga ttgtctctga atatatcaaa ccagtagtag
     2581 ccaataatag aacaataatc caatcagaaa atgccaaagg aact
//
LOCUS       DATIAS010000128         5962 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_841517, whole genome shotgun sequence.
ACCESSION   DATIAS010000128 DATIAS010000000
VERSION     DATIAS010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5962
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841517"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..1377
                     /locus_tag="VLA74_02530"
     CDS             253..1377
                     /locus_tag="VLA74_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphatase"
                     /protein_id="HSF49612.1"
                     /translation="MRITVSAIKADIGAIGGHTRPSDELLDIVKKFVDKRAKDLLIDH
                     YIGYTGDDIHIIMTHKLGKDNEKIHKLAWDAFTEGTKLAKKQGLYGAGQDLLKDSFSG
                     NVRGMGPGVAEIEMEERPSEVFSIFAADKTEPGAFNFPFWRVFVDAGSNTGLLINEKL
                     AAGVTFRIMDVMTGKIANLKLWNDKPELEAGLMYPGRYVIHSVYSADNEHILSASTDR
                     LHNIAGTYVGKDDPIAIMRTQKNFPATEEAGSAFNNPHYVSGNTRGSHHMPLMPVKLN
                     SAATLNYSIPIVSCLVFSMHDGKLTGPHDGFGTVDWDLQRMWASERAMIMRNQGFIHP
                     ATLVPEELEYNKGYEARLAKLNEKFEPEAKSKNSTYKKKR"
     gene            1419..2084
                     /gene="tpiA"
                     /locus_tag="VLA74_02535"
     CDS             1419..2084
                     /gene="tpiA"
                     /locus_tag="VLA74_02535"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HSF49613.1"
                     /translation="MKGSIILNFKNYMEISGEKTLELAKIAETISKSFKVEIILAPPQ
                     ASLFHITKSIKLPVISQHVDNEEVGSTTGFFIPELARSYGVVGSLINHSEHRLDHKII
                     KQLINRLRKLDMLSIVCASDAIEVGMLSKFNPDMIAIEPPELIGTGQAVSKVNPAIIR
                     DSVTEAKKYSESKVICGAGIVDKSDVISAIELGSQGILIASGIIKARSWKEKLSELVQ
                     AFR"
     gene            complement(2122..2424)
                     /locus_tag="VLA74_02540"
     CDS             complement(2122..2424)
                     /locus_tag="VLA74_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49614.1"
                     /translation="MSDFNNKSFLINQFLWIGISLAISLAISIIVPFPYSLPIIIGVF
                     ILLSFYMRQRTMRKLGMSGATMFGNNSVSYYCMNCGVKHNQLSCPRCGSKMKRVGT"
     gene            2887..3279
                     /locus_tag="VLA74_02545"
     CDS             2887..3279
                     /locus_tag="VLA74_02545"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSF49615.1"
                     /translation="MISLLTDIRLSEKKANAKKEAASSPTRKRIEAFIREEKVHDVLL
                     ALNKIGQPATFHDSKGIGKGEKYQIRYGRHGDITTMAYSNRRTVETVVDEDNVDEVVS
                     LIKGAAQISKSGAGGIIVVSPVDDVITI"
     gene            complement(3326..4321)
                     /locus_tag="VLA74_02550"
     CDS             complement(3326..4321)
                     /locus_tag="VLA74_02550"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HSF49616.1"
                     /translation="MSITICLSHKEDVDGISSAVLINSAFKKVSTILVDYANLINKLD
                     KLSNELGQVTKGYNRIFICDLGLNKKIHKKFVNILNKFVSLGYKVTYIDHHDLEPNIK
                     NEIKDIGVNLVHSTEESTSVQVYTKYKKRLKQHYAFFAAAGALTDYLDAKPLASSLLS
                     RFDRQFLMLESTVLSYMISSHQNDDEYLHRIVGTLSEMKFPHDIDGGFLEAEKYAQKI
                     SRALVSLSDEIRTSNNLVFVQNTLDLASSTVVNFILGASEKKVALVYKFKEEKSSFII
                     SIRGSKDCNTHLGRVVNEIASRLGGSGGGHDKACGAVIPENNFQDFVNLLDKNII"
     gene            4632..5228
                     /gene="dps"
                     /locus_tag="VLA74_02555"
     CDS             4632..5228
                     /gene="dps"
                     /locus_tag="VLA74_02555"
                     /EC_number="1.16.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA protection during starvation protein"
                     /protein_id="HSF49617.1"
                     /translation="MSADSQKGTVPKIVALEVLEKNGVNVERLKELITKGVGAEFTTY
                     YYYTILRMHCTGLDGEGIKEIVEDARIEDRNHFEAMTPRLYELGGSLPRDIRDFADQA
                     GCPDAYLPENWQNLESIIKVLLEAEQCAIRSWGEVCDMTAGKDPRTYDIAQRIMQEEV
                     EHEAWFIELLSKRPSGHFRRKYVGQSPHTGSQGGLIHQ"
     gene            5314..5457
                     /locus_tag="VLA74_02560"
     CDS             5314..5457
                     /locus_tag="VLA74_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49618.1"
                     /translation="MKRRVAEILMIASGIGLTIGAGTLNVISLVYGGLAIMGLGIISV
                     FWR"
     gene            5482..>5962
                     /locus_tag="VLA74_02565"
     CDS             5482..>5962
                     /locus_tag="VLA74_02565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49619.1"
                     /translation="MSFGTIDKQQKNECSNITICDPKILFKKIKEYLEEKRSIVVMHD
                     FFIDRIIKIKNQEELLSMIVEKSKFGGGSIRGVHTLEIEGGNAVNVAFCLAKLGLDVH
                     LFTIADNIGKKILSNLFKDLKNVKLHVFSGRPGYTTSLEFFNSSSNEMEANIMISDVG
                     "
BASE COUNT         2150 a          858 c         1063 g         1891 t
ORIGIN      
        1 ctaaaacatg agatattcta tttgctacac caggtttttc acagataatc aaggaatatt
       61 tttttttatc tatcgctaaa tttgaaaagt tatctttata ctctttcatt cataaagata
      121 tttaatatta tttacaataa aaaaattacc ctttttatta ttaaatatat ttggaagcaa
      181 agtatcacgg tattataaaa atatgaaata ttatcagaaa agatataaac aattaataat
      241 tcaaatttga ttatgcgtat aactgtttcg gcaataaaag cagacattgg ggccataggg
      301 ggtcatactc gtccaagcga tgaattactt gatattgtta aaaaatttgt tgacaaaagg
      361 gctaaggacc ttctaattga tcattacatc ggatatactg gagacgatat tcacatcata
      421 atgacacaca aacttgggaa agataatgaa aaaattcaca agttagcatg ggatgcattt
      481 acagaaggta caaaactagc aaaaaaacag ggcttatatg gagcgggaca agatttgcta
      541 aaagattctt tttctgggaa tgtcagagga atgggtccag gtgtagctga aatagagatg
      601 gaagaaagac caagtgaagt gttcagtatt tttgcagctg ataagacaga accaggtgct
      661 tttaattttc cattttggag agtttttgtt gatgcaggaa gtaataccgg tttgttaatc
      721 aatgaaaaat tagcggctgg cgtaactttc aggataatgg atgtaatgac gggcaagata
      781 gcgaatttaa aattatggaa tgataaaccg gagttagaag ccggacttat gtatcctggg
      841 cgatatgtaa ttcattcagt ttattcagcg gataatgaac atattttatc tgcttccaca
      901 gataggttgc acaatattgc aggtacttat gtgggaaaag atgatccgat cgctataatg
      961 aggacacaaa agaattttcc tgcaacagaa gaggcaggaa gtgcatttaa taatcctcat
     1021 tatgtgtccg gaaatacgag aggtagtcat catatgccat tgatgcctgt aaaactcaac
     1081 tcagctgcaa ctttaaatta ttctattcca atagtatcat gccttgtttt tagtatgcat
     1141 gatggaaaac tgacaggacc tcatgatgga tttggaactg ttgattggga tcttcagaga
     1201 atgtgggcat cagagagagc tatgattatg agaaaccaag gatttattca tcccgccaca
     1261 ttagttccag aagaattgga gtacaataaa ggctatgaag caagattggc taaattgaat
     1321 gaaaaatttg agccagaggc taaatctaaa aatagtacat ataagaaaaa aaggtaaaag
     1381 attaaatctg caaatatttt ccagaataga tcgttaattt gaaaggatct attattctta
     1441 attttaagaa ttatatggag atttctgggg aaaaaacatt agaattagct aaaatagcag
     1501 aaacaatatc aaaaagcttt aaagttgaaa taatattggc tcctcctcaa gcatcattgt
     1561 tccatataac gaaatctatt aaacttcccg tcataagcca acatgttgat aatgaggaag
     1621 taggctcaac tacaggattt tttattccag aattagcaag gtcttatgga gttgtgggat
     1681 ctttaattaa tcatagcgaa cacagactgg atcataaaat tattaagcaa ctaatcaata
     1741 gattaagaaa gctggatatg ctttctatcg tctgtgcttc agatgccatt gaggttggta
     1801 tgttatccaa atttaatcca gatatgattg caatagagcc cccagaactg atcggtactg
     1861 gacaagcagt gagtaaagtt aatccggcta ttattagaga ttcagtaaca gaagccaaga
     1921 aatattcaga atcaaaagtt atttgcgggg cgggcattgt agacaagagt gatgttatta
     1981 gtgctattga gctaggttca caaggaatcc taatagcaag tggcataata aaggcacgat
     2041 cgtggaaaga aaaattatca gaacttgttc aagcattcag ataaatgaat aaaaatgaaa
     2101 aattttttat aatagattgg tttaggtccc gactcttttc atttttgagc cgcatctagg
     2161 acatgatagc tgattgtgtt taactccgca attcatacag taataactta ctgaattatt
     2221 tccaaacatt gtagcgcctg acattcctag ctttctcatt gttctctgtc tcatgtaaaa
     2281 acttaataaa atgaaaacac cgattattat tggcaatgaa taaggaaatg gcacaataat
     2341 agatattgcc agacttattg ctaatgatat acctatccaa agaaattgat ttatgagaaa
     2401 acttttatta ttaaaatcac tcatcaattt acttatacca ttctggtatt tataaattat
     2461 tttaatacta gaatattttc actaaaagat ttgaacgagg actttacatc acatttaaat
     2521 attcctagat ttaacttaaa aatacatcga ccaaaccgaa ggggaacatt acccagactc
     2581 aggatattga gcagatatcc tgagtcaatc tttaaaaaat aattgaaatt aatgatgctt
     2641 ttagtctata caaatctatt gtactaattc ttcacacatg atgatggcga tgaaatatta
     2701 acgatttatt atataaaaat aaaaatattc atttatcaac tctgctgaga tagaaagata
     2761 aaatccaaaa atttttaaaa aaaatattac tttttatagc atcggacaga aaaattataa
     2821 ttttttattt ttattaaagt aaaggtcgaa tttattacta ttaataaaac ataactttaa
     2881 aaaaaggtga tttctttatt aactgatatt agattgtcgg agaaaaaagc aaatgcaaaa
     2941 aaagaagcag ctagtagccc tacaagaaaa agaattgagg ctttcattcg agaagagaag
     3001 gttcatgatg ttctgttggc tttaaataag attggtcagc ccgctacatt tcatgattca
     3061 aaaggaatag gaaaaggaga aaaatatcaa atcagatatg gtcgacatgg tgatattact
     3121 acaatggctt actctaatag acgtacagtt gaaaccgtag tggatgaaga taacgtagat
     3181 gaagtagttt cacttataaa aggagctgcc cagataagta aatccggagc tggtggaata
     3241 atagtagtat ctccagtaga tgatgttata acgatttaat tttcataaaa tttcatattt
     3301 ttttaaagtt taaatgagtt tattatcata taatattttt gtctaacaaa tttacaaaat
     3361 cttgaaagtt gttttccggt attactgcac cacatgcctt gtcgtgacca cctccactgc
     3421 ctccaaggcg tgatgctatt tcattaacga ctcttccaag atgtgtatta caatcttttg
     3481 atcctctgat agaaattatg aatgaacttt tctcttcttt aaatttatac accaacgcaa
     3541 cttttttttc agatgctcct aggataaaat ttactactgt actcgatgca aggtccagag
     3601 tgttttgaac aaacacaaga ttattagaag ttcttatttc atcagagaga gataccaagg
     3661 cacgcgatat tttttgagca tacttctctg cctcaagaaa tccaccgtca atatcatgtg
     3721 gaaatttcat ttcagataga gttcctacta ttctgtgtag atactcatca tcattttgat
     3781 gcgaagatat catgtaggat aacacagtag attccagcat caagaattgt ctatcaaacc
     3841 ttgacagtag ggaagaagcc aaaggtttag catcaagata atcagttaaa gctccagctg
     3901 cggcaaaaaa agcataatgc tgttttaatc tttttttata tttggtatat acctgaacgc
     3961 tggtggattc ttcggtagaa tgaacaaggt tgactccaat atctttgatt tcatttttga
     4021 tattaggctc tagatcatga tgatctatat aggtaacttt gtatcctaaa gatacaaatt
     4081 tattcaatat atttacaaat tttttatgaa tttttttatt taatcctaaa tcgcatatga
     4141 atattctatt atatcctttt gttacttgac ctaattcatt agaaagttta tctaacttat
     4201 ttattaggtt agcatagtct actaggatcg tagatacttt tttaaaagcc gaattaatca
     4261 agacagcaga agatattcca tcaacgtctt ctttatggga taaacaaata gtgatagaca
     4321 ttttaaaaaa ctaaatttaa tttttttcta caatttgcat attaaatgat tttttatttt
     4381 gcacaatatc cagtggggat cctattatag atgctttata aaattgaaaa acagaagacg
     4441 cgacaataaa acgatcaaaa agaatctcag ctttcatata cctttaatcc aattgttatt
     4501 taatatatat attctgttag tagatttaat gcagtgtaat tagtctagca atactgcgtg
     4561 acaacacttg aagatattcg aactgtttgt agtctataac ctttaaataa taccattcaa
     4621 atccgaatac tatgtcagca gatagtcaaa aaggaactgt tccaaaaatt gttgctctcg
     4681 aagtacttga aaaaaatgga gttaatgttg agagattgaa agaattgata actaaaggtg
     4741 tgggagcaga atttacaacc tattattact atacaatttt gcgaatgcat tgtacaggtt
     4801 tagatggaga aggaatcaaa gagattgtag aagatgcaag aatagaagat agaaatcatt
     4861 ttgaggccat gactccgcga ctttatgaat taggtggaag tcttccaaga gatataagag
     4921 actttgcaga ccaagccggt tgtccagatg cgtatttacc agaaaactgg caaaatctag
     4981 aatcaattat taaggtactc ttagaagcag aacaatgcgc tatcagatct tggggtgaag
     5041 tatgtgatat gaccgctgga aaagatccca gaacatatga cattgctcaa agaatcatgc
     5101 aagaagaggt tgaacatgag gcgtggttta ttgaacttct ttcaaagaga ccttcaggtc
     5161 actttagaag aaaatatgtc ggacaatcac ctcacacggg atctcaaggt ggattaattc
     5221 accaataact tttttatttt cctccaaaat ttaaaaatta actgttaaat aaatataata
     5281 cttttattat ccgtaattta tgattagaat caaatgaaaa gaagagtggc tgaaatttta
     5341 atgatagctt ccggaattgg tttgactatc ggtgctggta ctctaaatgt aatctctttg
     5401 gtgtatggag gactagctat catgggatta ggaataatat ccgtattttg gagatagaat
     5461 tagtagtagc taaaaaaaat aatgtcgttt ggtacaatag ataaacagca aaaaaacgag
     5521 tgttcaaaca taacaatttg tgatcctaaa attcttttta aaaagataaa agagtaccta
     5581 gaagagaaaa gatcaattgt tgtaatgcat gattttttta ttgacaggat aataaaaatc
     5641 aaaaatcaag aagaactctt atcaatgata gttgaaaaat caaagtttgg cggtggaagt
     5701 attaggggag ttcatacctt agaaattgaa gggggaaatg ctgtgaatgt agctttttgt
     5761 ctggccaaat tggggcttga tgtacatttg ttcacaatag cagacaatat aggaaaaaag
     5821 atcttatcaa atttatttaa agatttaaag aatgtaaaat tacatgtatt ttctggcaga
     5881 cccggatata ctacttcatt ggaatttttc aattcatcaa gtaacgaaat ggaagctaat
     5941 atcatgatta gcgatgttgg ag
//
LOCUS       DATIAS010000129         2395 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1931697, whole genome shotgun sequence.
ACCESSION   DATIAS010000129 DATIAS010000000
VERSION     DATIAS010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931697"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..378
                     /locus_tag="VLA74_02570"
     CDS             142..378
                     /locus_tag="VLA74_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49620.1"
                     /translation="MCKKTKNKDYIICYIELGNNPGNTLSPKLKEELNQLYKTNKEVC
                     NEIVTNSVKRLYESIDYRYFHMNGVGGKIAWTII"
     gene            363..2207
                     /locus_tag="VLA74_02575"
     CDS             363..2207
                     /locus_tag="VLA74_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49621.1"
                     /translation="MDNNLIKNNNKEDTNSDTNNLTGIEGGNIDISTSKKISILNQLH
                     PQVREELSKHDWEIISYNPPKFLVAHLEHKQIIFAELKEKDVKRRKNSIVGATIENDT
                     NETISYLKFSRIVIGAIPIEVILNKNPLGLFDQKYIIKFVTHTELSFTIGPKTLDEIL
                     SCLKDRSLIYMPIKATEALSIIINAFQRNGKLIVKDDMETTGFYFIDGEIKQYTNNYN
                     SNPKPTFDQIKKCCELLDILQIKFKNKDVFPTLLKWSIVAPFDYVLKQVHKKWIPWLY
                     AYGWANTGKSTLGDICCCIWNRYQDKDSILPFTAADTKARLGEILSKSTYPIVINEVA
                     QLNDENRNKDMVEMYKIAITDLTSRKKIVNKTNYTDIPSFSPCILTSNSSPPSDTGFR
                     RRIIPIVFTEKDQYSEGEMKDFKELFDQLVKHELRYLGDFTVNYIMEHQELLLDGKKD
                     WKEIAEIILTEMYKSVHREPSEWIKYFVKENQMADSKEDINLLFRSFLINVVNETYNK
                     YYRNIEKDNDVPNLPFSSRLNFCLDHKLIPFLNPVTTNNKNSNDEKIIITSDLIHELK
                     KKIPQISSLNEIAAIIEGFEYGQKRINGKNIRTVFGTKNQLLDFLWLE"
BASE COUNT         1006 a          301 c          376 g          712 t
ORIGIN      
        1 taatagagaa ggaatatttg gagctgagga aacagcacat catcatcagc tatattgcag
       61 attcagatta aagaataacc agaaaagatt tggattgata atgggtatag gatggaacat
      121 tggtgttcta aacagattgc aatgtgcaaa aagactaaaa ataaagatta cataatatgt
      181 tatatcgaat taggcaacaa ccccggtaat actctatctc caaaactaaa agaagaatta
      241 aatcaactat acaaaaccaa taaagaagta tgtaatgaaa tagtcacaaa ttctgttaag
      301 aggttatatg aatcaataga ctatcgatat tttcacatga atggagtagg tggaaaaata
      361 gcatggacaa taatttgata aaaaataata ataaagaaga tactaattct gatactaata
      421 atctaactgg aatagaaggt gggaatatcg atatatcgac atcaaagaaa atttctattc
      481 taaatcagct tcatccacaa gtaagagaag aattatcaaa gcatgattgg gaaataatat
      541 catataatcc tccaaagttt ttggtcgcac atttagaaca caaacaaata atttttgctg
      601 aactcaaaga aaaagatgta aaaagaagaa agaacagtat agtaggggct acaattgaaa
      661 atgataccaa cgaaaccata tcttatctaa aattttccag aattgtgatt ggtgccatac
      721 ctatagaagt aatactgaat aaaaatcctt tgggattatt tgatcaaaaa tatataatta
      781 agtttgtaac acatactgaa ctttcattta cgattggccc aaaaacatta gatgaaatat
      841 tatcttgtct aaaagatagg tcattaattt atatgccaat aaaagctaca gaagccttat
      901 caataataat aaatgctttt caaagaaatg ggaaattaat tgtaaaagat gatatggaaa
      961 ctactggatt ttattttata gatggagaaa taaaacaata tactaataat tataatagta
     1021 atccaaaacc tacatttgat caaatcaaga aatgttgtga actattagat attttacaaa
     1081 ttaaatttaa aaataaagat gtatttccaa ctctcttaaa atggtctatt gttgctcctt
     1141 ttgactatgt tctaaagcaa gtgcataaaa aatggattcc ttggctttat gcttacggat
     1201 gggctaatac tggcaaatca acattaggtg atatttgctg ctgcatctgg aaccgctatc
     1261 aggataaaga ttcaatattg ccatttactg ctgcagatac aaaagcaaga ctaggagaga
     1321 tattgagtaa gagtacatat cctattgtga taaatgaggt agcacagcta aatgatgaga
     1381 atagaaataa agatatggta gaaatgtata aaattgcaat aactgatctt acttctagaa
     1441 aaaagattgt aaataaaact aattatacag acataccatc attttcacca tgtattttaa
     1501 caagtaattc aagtcctcca tctgatacag gttttagacg tagaataatt ccaattgttt
     1561 ttacagaaaa agatcaatat tctgaaggtg agatgaaaga tttcaaagaa ttatttgatc
     1621 aactagtaaa acacgaatta cgatatcttg gagattttac tgtaaactat attatggaac
     1681 accaagagct tttgcttgat ggtaaaaaag attggaagga aattgcagaa ataatactaa
     1741 cagaaatgta caaatctgta catagagagc catctgaatg gataaaatac tttgtaaagg
     1801 aaaatcagat ggcagacagt aaagaagata ttaatctttt atttcgaagt tttctgatca
     1861 atgtggtaaa tgaaacatat aacaaatatt ataggaacat agagaaagat aacgatgttc
     1921 caaatcttcc tttttcaagc agattaaatt tctgtttaga tcataaattg ataccattct
     1981 taaatcctgt tactactaac aataagaata gtaatgatga aaaaataata ataacatctg
     2041 atcttatcca tgaattaaaa aagaagatac cacaaatttc tagtttgaat gaaatagctg
     2101 ctatcattga gggatttgaa tatggccaaa aaaggattaa tggaaaaaat attagaactg
     2161 tgtttggaac aaaaaaccaa ttgttggatt ttctctggct ggaataaaaa taataacaaa
     2221 tgcagcagat gcagcacatg cagcgctgta tataacatat gacataattt tttattataa
     2281 actaaatgaa ataaaatatt atttaaaaca gatatttata aagaagtaaa aaaataaaat
     2341 ggttaaacta aaatacaaat ctttagtgac taaagaaact atagattatt atctt
//
LOCUS       DATIAS010000130         5741 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1114205, whole genome shotgun sequence.
ACCESSION   DATIAS010000130 DATIAS010000000
VERSION     DATIAS010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5741
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114205"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            375..554
                     /locus_tag="VLA74_02580"
     CDS             375..554
                     /locus_tag="VLA74_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49622.1"
                     /translation="MITKDDRKHSAITIFHYHDIPIPRISLLLGSSATQSNINLESTL
                     ICVSSTINLDIFILL"
     gene            complement(1071..2570)
                     /locus_tag="VLA74_02585"
     CDS             complement(1071..2570)
                     /locus_tag="VLA74_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49623.1"
                     /translation="MYITKKHLEIISALFFILFISFSLHNVYAANQMNMQNTAIDRCS
                     GNSPCTFVGTNFASINGGNNNHVNQINSKTSTCSYGSSCNIVSLNDLSTSNSQSSQIS
                     QISDSNNNNCKDSICTASSQNYASISNSYNSKIIQDIFQKNKCSTDSTCTIDGSLSAS
                     IDDKDNEIVIQELDQRNYCFINSNCYIEGSFSGTSGTSQQINICVLGSDCTNTNANSK
                     LIAIASSCSSTSSGIKICTPYGIFSVGEDDYGSAQQDNLNVQSPQATYSSASYNSNNN
                     NNYNNNDDVDDNNNGIQTGYQVQVVTNSPGSTSIQKATNLAENVNNSPSDDPTISQNI
                     ETYQNFDQIQLVAYSPNTYNKQEIANKVSNIFNGNGQNILQNSQGEQYVSQLQEIINS
                     QGTQSIQKGYNTILNSADGFYPLGAEQTVEGIQEILQKQLTKNSLDTSQNEIASNQKN
                     NIIVSDGLYTKPFQQLSGNQAINQVQNSLNSIGSIQTLLDSNLLNNKIG"
     gene            complement(3076..4392)
                     /locus_tag="VLA74_02590"
     CDS             complement(3076..4392)
                     /locus_tag="VLA74_02590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49624.1"
                     /translation="MMNIHQKTITKKNTGIIFTGMLFLSAAILFSFSFDQQNNAFAQQ
                     SNTVVQSAGSSQTMTGTIGGSQTSNTPNLAQNQITQPNTDGGIQTQALSGQQIASNTQ
                     TQSNSGLLPSINVQQSATSGNTVTNTNTQTNADGAADFSIQGAIVDQRAGAEQSATAT
                     VGNVLPPFNPAIQTATDQNTLENIIAGSENSVQQAIGTSATPAKQLAVSAQSLTNVAT
                     NDPNNVQEVTNTNRGTNNVNGINNGQDIPDYALQTLQPNQEGIVTQTQSNILTLLPAA
                     SNTQSSTTSNLLQNQLTGNNNVNPAQTAANTQQIGVSQLLQNLVSGSTQTIGLSNTGT
                     NQISGNANNAPTQTIQGFNQVIGTAAPNANTQSASGPLTFDNTQTITGGNTALNNLAV
                     NGFAGVTQSHLAPGGQTIPVAQTINPGTSLSNQLSNPNNSAVNTIP"
BASE COUNT         1914 a          728 c          879 g         2220 t
ORIGIN      
        1 tccagtccag taaatgattt gaatagcaat ggtttcctgg ataatctgaa ataatttagc
       61 aaatctacga aaaattgcta aaaaagagga atatagcttt aagctttcta atcatgcaag
      121 agatctaatg atgtacaaat agattcaacc atttttgtac atatgcttta gtttgcaatt
      181 tttctttcta catgaaaagt agtcatcaaa atattccatt ctatttatct ttgaagtatt
      241 gtatggttct ttcgatagta cttttttcat acaggtttca tacaaggaat gaatatgata
      301 tttaattttt aagaatctgc aaacctgtga tatcatgtac ttccatctgt agatagatag
      361 gatgcttacc ataattgatt actaaagatg atagaaaaca ctctgcaata actatatttc
      421 actaccatga tataccaatt ccaagaattt cattactttt aggctcaagt gcaacccaaa
      481 gcaatattaa tctagaatct actttaattt gtgtctcatc aactataaat ttagatatct
      541 ttattttact ataaaataat ctctcaggct ttatttttgt atctaatctc ttattgtggt
      601 atgacttctt ttaataaacc ttgataatgc ttttaaagta tttcttgatg aaagactatt
      661 aaagtaaata tgtagagagt atatatacac atattgtatt tatatcctca ggttttgttc
      721 tattcttaac taatatttct tcggtaaaat atacatgaaa gaaagttatt atagtttttt
      781 tcttaacttt atagagtcaa tttaacattc cagagaaaat atttatttat attgacaatt
      841 aaagagaaat gaaattattc tctcacaagt attattagga gttaaaatta atatcttaat
      901 gaaaatcttt agttagttag atttctaagt ataacatttt gattttattt tactattaaa
      961 cataattttt gattatacat tagataaact ttgaatatat tttttttcta tttgtacaaa
     1021 aaataataaa aaattagtag gtatctgatt caaatttttt agtttataat ttaacctatt
     1081 ttattattta aaagatttga atctaataga gtttgaattg atccaatact atttagagaa
     1141 ttttgaactt ggtttattgc ttgattacca cttaactgtt ggaaaggttt tgtatataaa
     1201 ccatcagata caatgatatt gttcttttga tttgatgcta tctcattttg agacgtatct
     1261 aatgaattct ttgttaattg cttttgtaat atctcttgta taccttcaac agtttgttct
     1321 gctcctaatg gataaaagcc atctgcacta tttaaaatag tgttataacc tttttgaata
     1381 gattgtgttc cttgactatt tattatttcc tgtaattggg atacatactg ttcaccttga
     1441 gaattttgta atatgttttg tccatttccg ttaaaaatat tagatacttt attagctatt
     1501 tcttgtttgt tgtatgtatt gggcgaatat gcaactaatt gaatttgatc gaaattttga
     1561 tatgtctcaa tattttgaga tatagttgga tcgtcagatg gtgaattatt tacattctct
     1621 gctaaattag tagctttctg aatactagta gaaccaggag aatttgtcac aacttgaact
     1681 tgatagcctg tttggattcc attattatta tcatcaacat cgtcattatt gttatagtta
     1741 ttattgttat tactattata tgaagcagaa gaatatgtag cttgtggact ttggacattt
     1801 aaattatctt gttgtgctga tccataatca tcctcgccga ctgaaaaaat tccatatgga
     1861 gtacatattt ttattccaga actagtactt gaacagcttg aagcaatagc aatcaattta
     1921 ctgttagcgt tagtgttagt acaatctgag cctaaaacac atatattaat ttgttggcta
     1981 gttccactag ttccagagaa acttccttca atataacaat ttgaatttat aaaacaataa
     2041 tttctttgat ccaactcttg tataactatt tcgttatctt tatcatcaat agatgctgat
     2101 aaagatccat caatcgtaca tgtagagtct gttgagcatt tatttttttg aaatatgtct
     2161 tgaattattt tgctattata tgaattacta attgaagcat aattttgact tgatgcagta
     2221 caaatagaat ctttacaatt attattatta gaatcactaa tttgagatat ttgacttgat
     2281 tgactgttac ttgtactcaa atcatttagg ctaacaatat tacatgatga accataacta
     2341 caagtacttg tttttgaatt aatttgattt acatgattat tattacctcc attaatacta
     2401 gcaaagttgg tcccaacaaa tgtacatggt gagtttccac tacatctatc aatagcggta
     2461 ttctgcatat tcatttgatt tgcagcatac acattgtgta aagagaacga aataaaaaga
     2521 ataaaaaaaa gtgcactaat tatttctaga tgcttttttg ttatatacat aagatctata
     2581 taatttttat gcatgctttt tatgtttaaa aagcttctat aaaaatatat cgtttaagtt
     2641 ttctatattt ggttatatta taatatttta tatcatccac tcaagttgca ccaataacaa
     2701 ttattattat tcttgtcgat tttaatttta attctcataa aagagtagta gtaagatagc
     2761 agaataagta aatatattct ctaaaggtta caaattatta tccatccagc tatggttttt
     2821 gtttttttat ttcaattgtt ttaattatta taaaatacac aaaatgtaaa attgatattg
     2881 aataatatga acttaatttc tatatttttt taattagatt atcaagtgaa gaaatttgtt
     2941 atgaaatatt tcaatatata ataaaatagt tctatatata gttattcatt atctaaataa
     3001 atttataaaa taaaaaaagg gttgattgta aaaaaaaagg gattgggtgt gtttgtttga
     3061 gtatttacta ttattttatg gaatagtatt tactgcggag ttgtttggat ttgagagttg
     3121 gttacttaaa cttgttcctg gattgattgt ttgtgctact gggattgttt gaccgcctgg
     3181 tgctagatga ctttgtgtta cccctgcgaa gccattaaca gctagattat taagagcggt
     3241 atttcctccg gttatagttt gtgtattgtc gaatgttaat ggacctgatg cactttgggt
     3301 attagcatta ggtgctgcag taccgataac ttggttaaat ccttgaattg tttgtgttgg
     3361 tgcattattg gcatttccac taatttggtt agtaccagtg ttggaaagtc ctattgtttg
     3421 tgtagatcca ctaactaagt tttggagtaa ttgacttaca cctatttgtt gtgtattagc
     3481 tgcagtttga gctggattaa cgttattatt tccagttaat tgattttgta acaagtttga
     3541 agtagtagat gattgtgtat tagaagctgc aggaagtaat gttagaatgt ttgattgggt
     3601 ttgagttaca ataccttctt ggttaggttg taaagtttga agtgcataat ctggaatatc
     3661 ttgtccattg ttaattccat taacgttatt ggtacctcta ttggtatttg ttacttcttg
     3721 gacattattt ggatcatttg ttgctacatt agtaagactt tgtgcagata cagccaattg
     3781 ttttgctgga gtggcagatg ttcctatagc ttgttgaaca gaattttcac tgcctgcaat
     3841 tatgttttct aaagtatttt gatctgttgc agtttgtatt gctggattaa atggtggtaa
     3901 tacatttcct actgttgcag ttgcagattg ttcagcacca gctcgttggt ccacaatggc
     3961 accttgaatt gaaaagtctg cagcaccatc agcattggtt tgagtatttg tatttgttac
     4021 tgtatttcct gaggttgcac tttgttgtac attaatggat ggtaataggc cggaatttga
     4081 ttgtgtttgt gtattagaag caatttgttg tccagaaagg gcttgtgttt gtatacctcc
     4141 atctgtattt ggttgtgtta tttgattttg agctaaatta ggtgtattag atgtctgtga
     4201 tccaccaata gttccagtca ttgtttgact tgagccagcg gattgaacaa cagtattaga
     4261 ttgttgtgca aatgcattgt tttgttgatc gaaagaaaat gagaacaaaa ttgcagcact
     4321 caagaataac attcctgtaa atattatacc tgtatttttt ttagtaattg ttttctgatg
     4381 aatgttcatc attttacatc atatgaggct atatataagc tatttggtta atttgttttt
     4441 tatgtccaaa agtaacgatt aaacaataac acagatattg aaatacttag taccaaaaat
     4501 gggatttatg actatagcgg gggtaattag gatcatattt aattagatta aatatatctg
     4561 aaaattagat aaccaaaatt ttaaaatcat aggtaacatt acaataacac tatgttatga
     4621 ttttgggatg ttattttttg taaaatagtt tttaataatt tttcggcgtc gaaaaatttt
     4681 gacatcttcc aaaatgagat atacagatta gcgtcctttt atactatctt ttatttgtat
     4741 aatcattcaa taaaataaag aacattgaat aaaaacctat atatattaga tcctttatat
     4801 agttaaaact taaagctgta ttcatcttct ttaccagaat tccttatcaa tttactaaat
     4861 tttccagatt atccaggaaa cttattgttc agtcattttc aggtttggaa ctatctgaat
     4921 tagattcgat atgcaaggaa atagaattca gatatccaaa atgagattat tcgtttgttt
     4981 atctaaaagc gagaaataag atatttcggt acaggaaatc attttaaact taaagtaaga
     5041 gacatctttc tcaagatgct tcttgtgtat aacaaacata cataattaat tcattttctg
     5101 gatttttatt tgattagatc aaagtaatgt acatagagat atacaatatg gaatctgaaa
     5161 aagttcttcc actgcctcaa aagttataca atattaatag aagattgaga actattgaga
     5221 agtaaaagaa tattttccaa aatttaaatc atttagagat tcaacagaac aagaaatata
     5281 gcatctaagg gcaaaaaaga taagaaaaaa aaggttacta tccatacaag aagaaaaaac
     5341 atacagcaaa gatacaacag atggtaaaga aggagagata atgtatataa atcaaaatac
     5401 aagaaaggag agaatcatga ttatcatatt tacaaagatg aatatccaat atcactacta
     5461 cagttaaaaa ctattattat tatcttgttt tagaattata caaaagaatt catttatttg
     5521 tatttattat atcaataccg tttataagaa aatgtatttt ttaatatttt acttagatgg
     5581 ttttagaatt tacaggagaa ataacagatc ctatccataa atatattcgt tttacagaag
     5641 tagaaaaaaa attaatcgat accgaagttt ttcaaagatt gagaaaaata agacagctag
     5701 ctggtgctca cttagtatat cctagtgctc agcatacacg t
//
LOCUS       DATIAS010000131         2281 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_297149, whole genome shotgun sequence.
ACCESSION   DATIAS010000131 DATIAS010000000
VERSION     DATIAS010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297149"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VLA74_02595"
     CDS             complement(<1..404)
                     /locus_tag="VLA74_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49625.1"
                     /translation="MSSNTINPKPCNYGCNTRIYWNTSENAYFEVFSGNRHQCPNRQQ
                     QHSNYNNKKATSSIPSPSQTTTVKNKPSSYSTNKKSWFKIPNPIMSNSLELLQGSIVD
                     VQRKYEILSDMVSEANGKVHDSQSHIVTAAAP"
     gene            complement(410..574)
                     /locus_tag="VLA74_02600"
     CDS             complement(410..574)
                     /locus_tag="VLA74_02600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49626.1"
                     /translation="MSSSNNNDQNSSNDEYIEEEEDGFDDDIDDFYEEDNVFEEKEDI
                     GNDDEYEESE"
     gene            complement(586..861)
                     /locus_tag="VLA74_02605"
     CDS             complement(586..861)
                     /locus_tag="VLA74_02605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49627.1"
                     /translation="MKITNSYKFESNITALNNGKIVNKPKHYRFQIGDYLMYNKEKDF
                     YYNLSYAQIKNLYWNSDLIVGYVANDMINNNNGNKDKTSMIKLSRSD"
     gene            complement(905..1324)
                     /locus_tag="VLA74_02610"
     CDS             complement(905..1324)
                     /locus_tag="VLA74_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49628.1"
                     /translation="MPNLDPWIHQQSENNQIKEQGNSKFENYLLSYRIECQKIIERNS
                     HQHPAFLERYQKIIELIDWTLERYRIVIQRNKIQQQNEQDLIIINRIRQELDEKRKIA
                     INKIKQSELRDEIAMYRLEETTIDDVLCEIREFVYSG"
     gene            complement(1506..1664)
                     /locus_tag="VLA74_02615"
     CDS             complement(1506..1664)
                     /locus_tag="VLA74_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49629.1"
                     /translation="MNDTLLTSTMRISDETKRELVKIGAQLSVKDGSERSMEDVVKYL
                     IDNYKKKK"
     gene            complement(2036..>2281)
                     /locus_tag="VLA74_02620"
     CDS             complement(2036..>2281)
                     /locus_tag="VLA74_02620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49630.1"
                     /translation="FSIRQGEEVLILNNATSNNHSFTNGENPEDPMAGKLFHTDTIKS
                     GSFAEYLAVNLSPGKYPFFSIADPANIKGEMTILPGQ"
BASE COUNT          748 a          327 c          305 g          901 t
ORIGIN      
        1 tttggagcag cggcagtaac tatatgtgat tgagaatcat ggacctttcc atttgcttct
       61 gaaaccatat cactcaaaat ctcatatttt ctctgaacgt ctactataga accttgcaat
      121 aactctaagg aattggacat tattgggtta ggaattttga accaggattt cttatttgta
      181 gagtatgaac ttggtttatt ttttacagta gttgtttgtg atggtgatgg aatagaagat
      241 gtggcttttt tgttattata attactatgt tgttgctgcc gattaggaca ttgatgtcta
      301 ttcccactaa acacttcaaa atatgcattt tctgaagtat tccagtagat cctcgtatta
      361 cagccataat tacaaggttt tggattaatt gtattagaac tcattctcac tattcacttt
      421 cctcatactc atcatcgtta ccgatatcct ctttttcttc aaagacatta tcttcctcat
      481 agaaatcatc tatatcatca tcaaatccgt cttcttcttc ctcgatatat tcatcattac
      541 tactgttttg atcattgtta ttagaagaac tcatttctta tttccttaat cacttctgga
      601 taattttatc attgaagttt tatccttatt accattatta ttatttatca tatcattagc
      661 aacatatcca acaatcaaat cactattcca atataagttt tttatttgtg cataactgag
      721 attataatag aaatcttttt ccttattgta cataagataa tcgcctattt gaaatctata
      781 gtgtttaggt ttgtttacta ttttgccatt atttaatgca gtaatattgc tttcaaattt
      841 ataactatta gttattttca ataggaaaaa ccacacatat tacaaattat ggaaattcaa
      901 taatttaccc actataaaca aattcacgta tttcacatag cacatcatca atagtagttt
      961 cttcaagtct atacattgct atttcatctc ttagttcaga ctgtttaatt ttatttatag
     1021 caatttttct tttctcgtca agttcttgtc taattctatt tattattatt aggtcttgtt
     1081 cattttgttg ttgaatttta tttctttgaa ttacaattct atatctttct aaagtccaat
     1141 caatcaattc tataatcttt tgatagcgtt caagaaatgc aggatgttga tgcgaattac
     1201 gctctattat tttttggcat tctatcctat aagataacag ataattttca aatttactat
     1261 ttccttgctc tttaatttgg ttattttcac tttgttgatg tatccaggga tcaaggtttg
     1321 gcatatttta aacacaataa cagtatttta ttaataggaa agatactttg ttagagggag
     1381 agaggtagag aatataaaaa atgtatagat gttggtttac acgtctcaaa ttacgagata
     1441 aaaagataaa gagaagtgaa aagtatgttg gaatttataa tagattatat ttgattaaga
     1501 aagaattatt tctttttttt ataattatca attagatact ttacaacatc ttccattgat
     1561 ctctctgatc catccttaac acttaattgc gctcctatct ttacaagttc tctttttgtt
     1621 tcatcactta ttctcatagt cgatgtcaat agcgtatcgt tcatatacaa ataatgtttc
     1681 aattaattat atttatctgt atatgaagta tatttagtat acattaatat tatagataat
     1741 gtatacaatg tatatgaaaa agaattccat taaatgtaga agttgtttat accaatttga
     1801 tcctataaaa gaaggtaatt taaagaaaag gaaatgtgga atatgttgtt ttggagattc
     1861 ttattctata aggtcaaaga aagaatatga aagaaatttg ctgattgcta taattgaatc
     1921 gcaataacaa taataattag taaccaagtg atataattaa gaaaaaagaa taagattcaa
     1981 acgaattata ttaaactaat tataattatg aataaaaaat gttattgatt tagtttcatt
     2041 gtcctggtaa aatagtcatt tctcccttaa tatttgcagg atcagcaata gagaaaaatg
     2101 gatattttcc aggtgataag tttactgcta aatattctgc aaatgagcca gattttatag
     2161 tatcagtatg aaaaagttta cctgccattg gatcttctgg attttcacca ttagtaaaag
     2221 aatgattgtt actagttgca ttgtttagaa tcaatacttc ttcaccttgt ctaatcgaaa
     2281 a
//
LOCUS       DATIAS010000132         2079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_24054, whole genome shotgun sequence.
ACCESSION   DATIAS010000132 DATIAS010000000
VERSION     DATIAS010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24054"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..1215
                     /locus_tag="VLA74_02625"
     CDS             259..1215
                     /locus_tag="VLA74_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49631.1"
                     /translation="MKNIKMMCFFLFWGFVLLPNVYGETINQSMEGSMDIQITYPDES
                     IIGRIMSISMLIKNNGWEDKQDISFVFTSQDNAMVPVSDNSIRIDKLSQGGSYGESIN
                     FKISSDINPGIHFLNVKYSQVLVSNNKEPQEPIVHDIAIPIVLKEEPSVRIHTIIPEA
                     IFANAEFPFIIEIVSEDIEITNVNVEIIPPTDIQFRGETLHLFSTIQKNSPVTVTSRI
                     ISPIEKINTEYKLPFHIIVTYTNDMGEEKSESQVVSTILRPRTFMELTTDGGIWIGGF
                     FIAPYVSIGTIIGIPAGAIISLLISKNRKSTKNRSKKRKDKN"
     gene            complement(1212..1511)
                     /locus_tag="VLA74_02630"
     CDS             complement(1212..1511)
                     /locus_tag="VLA74_02630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49632.1"
                     /translation="MTELNKKVFGRITTKEIIGVTPPAIPDTKKLLENEFQNLINELK
                     SQTKDDLKKLLKEQQIANKYINSRPGAMALAQDKIRLFTEYNQKYIKIINEKLKS"
     gene            1641..1988
                     /locus_tag="VLA74_02635"
     CDS             1641..1988
                     /locus_tag="VLA74_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49633.1"
                     /translation="MKNGHFISNSCYIIKHYKKSILVIVMAIPDDIQEYVEKNIKLMI
                     SQTETYLPIIKIVFPYSKNLADGIYNLIVGSAISVFINQYAMRMKYPTAEDFSEFAKI
                     AYKYRDQIDQFFK"
BASE COUNT          740 a          265 c          331 g          743 t
ORIGIN      
        1 ttttttctag acgtttaatc tgcttgtggt cttctcgtaa agagtcagtt gcactcaatg
       61 atatcaaatt gtttatgatg atttaatgtg tatctagttt acaaaattac ctatgggtaa
      121 tttttcttaa tatcaagagt ggaatctttt ctaaaatgaa aggcgatatc ttaaattcta
      181 caaattagta tatgagatat gtgcaggatg ttccctctaa gaaaaataga gttatggaag
      241 aatttcaggt aaaatatcat gaaaaacatt aagatgatgt gtttttttct attttggggg
      301 tttgttttac taccaaatgt gtatggagag acgataaatc agagtatgga aggaagtatg
      361 gatattcaga taacatatcc agatgagtcc ataatcggaa gaataatgtc aatttcgatg
      421 ttaattaaaa ataatggttg ggaagacaaa caagacattt catttgtctt taccagtcaa
      481 gacaatgcaa tggttccagt ttcagataat agcatcagaa tagacaaatt atctcaaggc
      541 ggctcatatg gagaaagcat aaattttaaa atttcatctg atattaatcc aggaattcat
      601 tttcttaatg taaaatattc tcaagtttta gtaagcaata acaaagaacc acaagaaccg
      661 attgttcatg atattgcaat accaatagtt ctaaaagaag agccaagtgt aagaattcac
      721 accattatac cagaagcgat ttttgcaaat gctgaatttc catttattat agaaatagtt
      781 tcagaagaca tagaaattac aaatgtaaat gttgagataa ttcctcctac cgatattcag
      841 ttcagaggag aaacattgca tttgttttca actatacaaa aaaattctcc agtcaccgtt
      901 acttcaagaa taatttctcc aattgagaaa ataaatacag aatacaaatt gccatttcac
      961 atcatagtca catatactaa tgatatggga gaagaaaaga gtgaatcaca ggttgtttct
     1021 acgatattac gacctagaac atttatggaa ttaacaacag atggtgggat ttggattggt
     1081 ggtttcttta tagcacctta tgtaagtatt ggaacaataa taggaattcc agctggagca
     1141 attatttcat tattaattag taaaaataga aaatcgacaa aaaatagatc aaaaaagaga
     1201 aaagataaga attaagactt tagtttttca ttaataattt tgatatattt ttgattatat
     1261 tcggtaaata atctaatttt gtcttgtgct agagccatag cgcctggtct actattgatg
     1321 tatttatttg ctatttgttg ttcttttaac aattttttca aatcatcttt ggtttgagat
     1381 ttaagctcgt taatcaagtt ttgaaattca ttttccaata atttctttgt atcaggaatt
     1441 gcagggggag ttactcctat gatttctttt gtagtgattc ttccaaatac ttttttgttt
     1501 agttcagtca ataatcaaaa ttccttttag gattataaat ttaatttggt ttgttgtgat
     1561 tgctgtattt tctgttggtt gtaatttgat atctttggtt ggcataaata tgataaaatt
     1621 tttctttaat agttgtttaa atgaaaaatg gtcatttcat atctaattca tgttatataa
     1681 taaaacatta taagaaatca atcctagtaa tagttatggc aatcccagat gacattcagg
     1741 aatacgttga aaaaaatatc aaattaatga tttctcagac tgagacgtat cttcctatta
     1801 tcaaaatagt atttccttat tcaaaaaatt tagcagatgg aatttacaat ctaattgtag
     1861 gtagtgcaat atctgttttt attaatcaat acgcaatgag aatgaaatat ccaacagctg
     1921 aagatttttc agagtttgca aaaatagctt acaaatacag agatcaaata gatcaattct
     1981 tcaaataatt ctagaatgta agagtgaatt ttaaatggtt ttttcttatc atgtaattaa
     2041 atttgaaact atatcatttt tacaaggtac acattggtc
//
LOCUS       DATIAS010000133         2638 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1250455, whole genome shotgun sequence.
ACCESSION   DATIAS010000133 DATIAS010000000
VERSION     DATIAS010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1250455"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1012..1323
                     /locus_tag="VLA74_02640"
     CDS             1012..1323
                     /locus_tag="VLA74_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49634.1"
                     /translation="MSKRSVNIELPEEIWKIIDTQFKLNGESDSEILSNIVKDYLAHG
                     YDQDIENLIAENRLKDLVEIQHDMLMSFKDLLEKKGLITHQEWAQIMQERIIKNARSF
                     Y"
     gene            1588..1884
                     /locus_tag="VLA74_02645"
     CDS             1588..1884
                     /locus_tag="VLA74_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49635.1"
                     /translation="MRSQHYRMSNDKVWKQMRQRINDPFRYYKKGLKYGDYMLPSGYY
                     VSQTYGALHKCWIGFVIAKAKHESDKIDLYAGRIQKLERELGIEVTDFSEWGID"
     gene            complement(1981..2244)
                     /locus_tag="VLA74_02650"
     CDS             complement(1981..2244)
                     /locus_tag="VLA74_02650"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HSF49636.1"
                     /translation="MVISNTIGDCIESIPPSKLLHESEESTVEAEHIIKNLTLENQTV
                     LDPMMATGTTGIAALKLNRKFIGIEKDSHMFEMAKICIMNSVQ"
BASE COUNT          892 a          389 c          357 g         1000 t
ORIGIN      
        1 ctatatcatc atcttcatct aaaatgctat catctgtttt attatttgaa gaactatcta
       61 tttcagaagg ttcatcatcc actgtattag cgttatcgtt atttattaca ttatatgcag
      121 aaccatttat taccaatact gtatttaaaa caggattagc tacatagatt ttatttgaat
      181 tagtattgat cttaagtttt atatcagaag gtactctcct atacggatct tgtctaaatt
      241 agtatcatag gtaccattta ttacatcaat acttgaatct tcattggcta tgtagatcgt
      301 atttgtcttt tcattaatat ctatatctga tggtccattt cctacttcaa tagtaccaat
      361 tttcttataa taaaaaccat ctattacaga gacgtcatta gagtcatcat ttaatatata
      421 gactttatgt gtatcttcat taacttttaa atctgatgga tcatctccta ccgatatact
      481 gttatttatt atcttatctg aataaccatc tattacagag acactattag attcctcatt
      541 tactacatag actttatgtg tatcttcatc gatctctata tcagaaggtg acgctccaac
      601 ttgaattcta tttgttaaat tacctgaatt actatctatt atagatatgg tattagaatc
      661 ctcattagct acatagattt tattgatctt ttcattaact tttatatcac ttggattact
      721 atctacatta atttgtggac ttttttcaaa tatttttttt tttgctgtat tatactttct
      781 aatgtttgtg cactaacatc aattcttgta gctctattaa cttaacgata taaatttagc
      841 tatgaatgtc atggtctgac ttgtatatta ctagggtttg tcatgaacag aaacatccac
      901 tatcattgta gttatgtact ctttgtattt gtattttctt aggtattaaa ttaaaagaag
      961 ttttaataaa ataatataaa cgctacaata ataaaataat attgtagaac aatgagtaaa
     1021 agatcagtca atatagaact accagaagag atctggaaaa tcatagatac tcaatttaaa
     1081 ctgaatggag aatcagattc tgaaatacta tctaatattg ttaaggatta tttagctcat
     1141 ggatatgatc aagatattga aaatctcatt gctgaaaata gactaaaaga tttagttgaa
     1201 attcaacatg atatgctcat gtcttttaaa gatctgttag aaaaaaaagg attgataact
     1261 catcaggaat gggctcaaat aatgcaagaa agaataataa aaaatgctag atctttttac
     1321 taaaaaacta ttaaatattt tttttcttat aacaaaaaaa taatatatgt tactacagtc
     1381 acaactgtct aaagaattat tgctattctg tgtagctata ctaattaaca tacaaaatat
     1441 tgtaggaaaa agtttttaaa atgtggtatc ttatgtggga atatctacaa agctatcttt
     1501 aacaaaactt tttttaaact aaactaaatt ttattatcag tagttttttt attaacttat
     1561 taactttaga ttttaattgt tatgtagatg agatcccaac actacaggat gtccaatgat
     1621 aaagtctgga agcaaatgcg tcaaagaatt aatgatcctt tccgatatta taagaaaggc
     1681 ttaaaatatg gtgattatat gctgccttca ggatattatg tttcacagac gtatggagct
     1741 cttcataaat gttggattgg atttgtcata gcaaaagcaa aacatgaatc tgataaaata
     1801 gatctatatg ctggaagaat ccaaaaacta gaaagagaat tagggattga agtaactgat
     1861 ttctcagagt ggggaataga ttgattctct agtgatctct gttttcgttt tgatttaatc
     1921 cataatgggt cactataagt tttcacttct tcaataatga attttgattt ccacttatga
     1981 ttattgaacg gagttcataa tacatatttt agccatttca aacatatgag aatctttttc
     2041 tattccaata aactttctgt ttagtttcaa tgctgctata ccagtagttc cagtagccat
     2101 cattggatct aagactgttt ggttttcaag agtaagattc tttataatat gctctgcttc
     2161 aactgttgat tcttccgact cgtgtagtaa tttagatgga ggaatagatt caatacagtc
     2221 acctattgta tttgaaatta ccaagtcatt tactctttca ccttatatat accataacaa
     2281 ttgtttccat tctacaaata catatcttag atatactttt tgatgatggc ctgcatgctt
     2341 aactgctaat gtccaccaat attttagatt attattattc aaggaaatct catgaaatat
     2401 gttgaatgct tcatctaata tgatgtgacc aacaaaggca acaaggcttc cacccagttt
     2461 ttaataccct tagataattt gactaattct tgatgtaagg taatacctac atagttggag
     2521 cagattttac taccaatttt gatatttcat aaaaaatatc actatttctg ttattgaatc
     2581 taaactctat ttcctttaga tatagatgaa aatattgctt tggtacgcct ctataatg
//
LOCUS       DATIAS010000134         2734 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_978797, whole genome shotgun sequence.
ACCESSION   DATIAS010000134 DATIAS010000000
VERSION     DATIAS010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2734
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_978797"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VLA74_02655"
     CDS             <1..594
                     /locus_tag="VLA74_02655"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSF49637.1"
                     /translation="ICGFGIGWSKDEYLAANIPYEKRGERADEILQAMKKVWTDDIVE
                     FNGNFYKIPKSIINPKPIQKPHPKILLGGFSQNTFERMAKYGDGYIGALAGSFGYFHN
                     LIRMFNDSIEKGSRTRKDFDLTILTYPYLMKSNRSEKNISNRSPMTGGTIDEIGSDLS
                     MLESSGVDRVILAVNAEKDYDVNETIEFVKELRKFCQ"
     gene            complement(977..2137)
                     /locus_tag="VLA74_02660"
     CDS             complement(977..2137)
                     /locus_tag="VLA74_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3179 domain-containing protein"
                     /protein_id="HSF49638.1"
                     /translation="MNNNNKKSNHHNEKIKLNFILLISLSVSIVLLSAIVFLSTDEEK
                     NIFKLSLGQEIKHTVPLDKIVSGGPPQDGIPSIDNPKFQSVQEADEILEDSELILGLN
                     INGDIRAYPLQILVWHEIVNDVVGDQPVAVTYFPLCFTNQVFNRTLSDGNTVEFGTSG
                     KLYNSNLVMYDRKSNSLWSQALGEGIVGEYAGVKLERIPFDVAYWKEWKELYPESKVL
                     SRDTGSVRPYGADPYGDYYTNDLILFPVANDDKRLGLKEIIIGLENNKDQYKAYKLQD
                     IETNKVINDVIGKGKKIALVSLEPFMVRVFDRVIDNDNSEESKKEIVVDLFYNQANNT
                     LIDKVTDSELNFEGNFINGQLKDKQLNRLPMDQGFWFEWAAFHPETEVFAIN"
     gene            complement(2162..>2734)
                     /locus_tag="VLA74_02665"
     CDS             complement(2162..>2734)
                     /locus_tag="VLA74_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49639.1"
                     /translation="GLKKSILQGGIISSITIISYLLIVVFTSPNLPATASISAALQVN
                     SPIIIGLAIGTGIQGFVISYRKKVIDSNKCEIKVNNKKKGFLRSSSTGNGAGAALSSF
                     FSFFSLVPLGCCGSWLFILSYLPMVFGNGASVFMIKYSNILSYVGLIIISSITLISIL
                     KLYKDLKASKNKNENKKILVEDKEGQRNFR"
BASE COUNT          939 a          439 c          349 g         1007 t
ORIGIN      
        1 atatgtggtt ttggtattgg atggtcaaaa gacgagtacc ttgcagcaaa tattccttat
       61 gagaaaagag gagaaagagc agacgaaatt cttcaagcta tgaaaaaggt atggacagat
      121 gatattgtag aatttaatgg aaatttttat aaaattccaa aatcaataat taatccaaaa
      181 cctattcaaa aacctcatcc taagattttg ctaggtggtt tctcccaaaa tacatttgaa
      241 cgtatggcca aatatggaga tggatatata ggagctttag caggatcttt tggatacttt
      301 cacaatttaa ttagaatgtt taatgactct attgaaaaag gttcaagaac tagaaaggat
      361 tttgatctaa ctattctaac atatccatat cttatgaaaa gtaatagatc tgaaaaaaat
      421 attagtaatc gatctcctat gactggagga acaattgatg aaattggttc tgatttatct
      481 atgctcgaaa gttctggcgt agacagagta attcttgcag tgaatgcaga aaaggattat
      541 gatgtaaatg aaactattga atttgttaaa gaactaagaa aattctgcca atagtatcaa
      601 acaaacaaac agtattttta tcgattatcc aggcattagc gatattgttt gtctattcaa
      661 atagtcattt attgttataa caatcaacat atcttttttt catctttaaa atttacgagt
      721 caaatgcttt taccaaagtt acatttacaa cagagagtgt atgatatttt cttaacatgt
      781 ataatcactc agcaaattct gtctctgttt cttccatcaa tacttttttt ctttttcaat
      841 taaatttatt tttgtttgtt aatttgatat ttttatttga aacgttcttg taattttata
      901 ataatatggt tgtcaattct aagaagtctc gatcattttt attgatgtaa caaataatga
      961 aggaaaataa ttatttctag tttatagcaa atacttcagt ttctggatga aaagctgccc
     1021 attcaaacca aaaaccttga tccattggaa gtcggtttaa ttgtttatct ttcaattgtc
     1081 cattgataaa attgccctca aaatttaatt cactgtctgt tactttatct attaatgtat
     1141 tatttgcttg attataaaat aaatcaacaa caatctcttt tttactttcc tcactattat
     1201 cattatcaat aacacgatca aatactctga ccataaatgg ctctaatgat actagtgcaa
     1261 tttttttacc tttacctata acatcattta ttactttatt tgtttcaata tcttgtaatt
     1321 tatatgcttt atactgatct ttattatttt ctaatccaat tattatctct tttaatccta
     1381 atcttttatc atcattggct acaggaaaca aaatcaagtc attagtataa taatccccat
     1441 atggatcagc tccatatggt ctaaccgaac cagtatctct tgataaaact ttactttcag
     1501 gatataactc cttccattct ttccaatatg caacatcaaa aggaattctt tctaatttta
     1561 caccagcata ctctccaacg attccctcac ctaatgcttg actccataat gaattgctct
     1621 ttctatcgta cattactaaa ttactattgt ataacttgcc agaggttcca aattctactg
     1681 tatttccatc actcaaagta cgattgaata cttgatttgt gaaacaaaga ggaaaatatg
     1741 taactgctac tggttgatca cctactacat catttacaat ttcatgccaa acaagaatct
     1801 gtaatggata agctctaata tccccattta tattcaaacc aagtatcaat tcggaatctt
     1861 ctaaaatttc atctgcttct tgaactgatt gaaattttgg attatcaatt gatggtattc
     1921 catcttgagg aggtccacca ctaacaattt tatccaatgg aacagtatgt tttatttctt
     1981 gtcctaaaga tagtttaaat atattttttt cttcatctgt tgaaagaaaa acaatagcac
     2041 taagcaaaac aatagaaaca cttaatgaaa ttagcaagat aaagtttaat tttattttct
     2101 cattgtgatg attacttttt ttattattat tattcataaa acgtatttac ctccattata
     2161 gttatctaaa atttctttgt ccttctttat cttcaactaa aattttttta ttttcatttt
     2221 tattttttga agctttaaga tctttataca attttaaaat agatatcaaa gttattgaag
     2281 atattattat taatccaaca tatgataaaa tatttgaata cttgatcata aatactgatg
     2341 caccatttcc aaaaaccatt ggcaaataag agagtatgaa aagccaacta ccacagcagc
     2401 ccaagggaac caacgaaaaa aatgagaaaa aggaacttaa tgctgctcct gctccatttc
     2461 ctgtacttga tgaacgtaga aaaccttttt tcttattgtt aaccttaatc tcacacttat
     2521 tgctatcaat gacctttttt ctatatgata ttacaaatcc ttgaattcct gttccaatcg
     2581 ctaatccaat aattatagga gagtttactt gaagtgcagc agatattgat gctgtagcag
     2641 gcaagttagg agaagtaaag actactatta ataaataaga aataatagtt attgagctga
     2701 taatacctcc ttgtaatatt gattttttta atcc
//
LOCUS       DATIAS010000135         2364 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1523281, whole genome shotgun sequence.
ACCESSION   DATIAS010000135 DATIAS010000000
VERSION     DATIAS010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1523281"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VLA74_02670"
     CDS             <1..382
                     /locus_tag="VLA74_02670"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSF49640.1"
                     /translation="LLVIRTDNGSQYTSKAFRKSLSVLLGLKLEHIYYNTPEQNGHIE
                     SFHKTLKKEYIWSNDFQNYQEAELAIRDAFTDYNKNRIHSALRYLTPYYEFISKWKMQ
                     QDIEEEKKKKVINIGNERKIVVSI"
     gene            complement(1253..1453)
                     /locus_tag="VLA74_02675"
     CDS             complement(1253..1453)
                     /locus_tag="VLA74_02675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49641.1"
                     /translation="MSSSEEENKNKTYKGKDPMSPEEITSHEPTAVKRDPHDQKIAKG
                     GKTGTDTEEAKEKYRKEGMTKV"
BASE COUNT          858 a          334 c          358 g          814 t
ORIGIN      
        1 cttactggtt atcagaacag acaacggttc acagtataca agcaaagcat ttagaaaatc
       61 tctatctgta ctactaggat tgaaactgga acatatctac tacaatacgc cagaacagaa
      121 cggacacatt gaatcatttc acaagacact aaagaaggag tacatttggt caaatgattt
      181 tcagaactat caggaagcag aattggcaat aagagatgca ttcactgatt acaacaagaa
      241 cagaatacat tccgcactgc gatatctaac accatattat gaattcattt caaaatggaa
      301 aatgcaacaa gatattgaag aggagaagaa gaagaaggtg ataaatattg gtaatgaaag
      361 aaaaatagta gtatctatat gaaaatggga aaagtgttcc caaaaatagg ggtccactcc
      421 aatagccatc tatagaaact cattaaaaca gaatatatat cttaatgtat tataggaata
      481 tgtttacaaa taatactata atgggaagaa aaactataac cataaatgaa gatactcata
      541 gagaattagt taaggtatga gtctatggtg aatctatgga cgatttaatt aaagattgtt
      601 gggaattagt tattccgaca attcaaacaa cttcaaatag ggtattttcc aacaaatagt
      661 ataattgggt tttctgaacc tgcatttatt gaagaaggat tagtcgaagg aaaatacgat
      721 attcaattct ttgatgatgc taataacgat ggtaattcag atcctggcaa aaatgaattt
      781 attgtatcaa tatcagttcg atgtgaagaa gaatagtaaa gattccttct atattttgtt
      841 tggctaattc ttttctgtaa taattaattt tcaaccagta aataatttgt ttcatattta
      901 tcaggtaata acagtatgtc atcacaagat attaatgaaa agaaatacaa ttgtcaatgc
      961 ggagaatctt ttagttcagt agaagaacta aatgagcata atcacaaagc acattaaaaa
     1021 tagataagaa tcatccaaac cttctttttt aattctaagg aacaaattat gtcaaaaagc
     1081 taatatgtga taagagaact tgttcttcaa tggccaaatg acatttatga taaatagttt
     1141 ttaacaataa ttattatgta aaataatatt taatgatatt tggcatcatc aatccaattc
     1201 aattgaacga aaaaaatatc aagaaagttc aaacctttct attactacta cattatactt
     1261 ttgtcatacc ttcttttctg tacttttctt ttgcttcttc tgtatcagtt cctgtctttc
     1321 ctcctttcgc aattttttga tcgtgtggat ctcgttttac agcagtaggt tcatgtgatg
     1381 taatttcttc tggtgacatt ggatcttttc ctttataagt tttattttta ttttcttctt
     1441 ctgatgaact catattgagt aatatataca ataaccaaag atttcaaatt tactataaaa
     1501 aagtaagtat atctatatat tattcaacct aattaatcag caaaataaat aattattatc
     1561 tattattatt agtggtagaa tctttatctt ttattaaacc atatttctgt tgatatattg
     1621 tggtcttccc atagattcct tagttctttt tttgtagtag aagactatgg caaacaaact
     1681 actggctatt tttatttttt tggtacgtat attatcgata atataatata taataattta
     1741 gaaaagataa tggactcctc agtatagaaa aaaaatcata tcactatgag gatagtcgac
     1801 taataatatt gttaattgcc atagcctcat ctatatcagc acaccagtat aacagttaga
     1861 taatagacag gctatgcatg ttgtaggttc gtgatctgtc tatttctgta gttagataat
     1921 ataaccaaca ttttatttag caattttgga taaattgtct tatgtagtaa taagtcatat
     1981 agcctaccac taaaaaatac agaatcagtg caaacagaca taatagtagc aggctacgtc
     2041 agatctgaca gatttgtatg gagttctttg gatgatatat atcctatccc taaactatat
     2101 aatgattgga cataaattat ctgttattaa aaaccatagc cttctatcta tttaatgtat
     2161 aacaatgggg ctatggctat tattattatt gtggttgatt tgattgatgt agtggtctgg
     2221 acccattgaa aatgagaaca ccttgtaatg gagacttttt tactcctatt gctttgttgc
     2281 gtaactcatc tagataatca aatctatcct actgagattg ataattatgt aatagttaga
     2341 ctctgaaaca agttatataa cgat
//
LOCUS       DATIAS010000136         3244 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1251290, whole genome shotgun sequence.
ACCESSION   DATIAS010000136 DATIAS010000000
VERSION     DATIAS010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3244
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1251290"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(359..>3244)
                     /locus_tag="VLA74_02680"
     CDS             complement(359..>3244)
                     /locus_tag="VLA74_02680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="primase alpha helix C-terminal domain-containing
                     protein"
                     /protein_id="HSF49642.1"
                     /translation="GFDFDKELGIKEFCKAVIGANTSYIDEIKQKIIVEQNAKDPFSL
                     HIYFYSEIPFIDKSPDSILGIEIKSNGKGLMCATPSYHSETDSIWQIKGTDSPIILKS
                     EEALKLMSNINDICGKYNISYLKIGKDASTSSSSIYLTPLIKQMINSLEINPDIIIQE
                     GVRHDTLLSIANSVLIKHSHKISKENLKDFFTKVNDILCSPPLPQNEVTSIWQSALEF
                     SQKVVQDFTIINNDEADHNNYNKPIIVSLEIGEELEYIVQSFVKDNQQNNLILEFNHK
                     YPQTKIHVPTTGPKKWLDFRKDFKKILEEYEVKEEDIKLVIKTLDSNYDLIINKNERG
                     GDGGDGGDRSAGGTIADILVKLAMENSSLFKDEFDTPYALVKINDHFEVMAIDGSKFK
                     KYLSKLYYDNNDNKSANSEGINNAKMTLGANAVFKSQTIPLHLRIAWSNPETKDSIYY
                     DMTDEKSRCIKITKGESWKIVENQIEVLFKRFGHQSPQLEPLHDYDSKILDKFVDSLN
                     IKNETDKILIKVWIVSLLIPVISIPMVLPFGPEGSAKSTLQKKIKLLIDPSSLDLLSI
                     YNDKTQFIQQLSHNFLCFYDNVRYEPPWLSDETCRAITGGAFSKRELFTNDEDIPYRY
                     KKRMSFSGINIIFKEADALDRSIRIELEKLDPKKKIPDEKIDSELKQQTPQLLGYIFD
                     IVAKALEIKDTVSLEELPRMADFAVWGEAIARAMGYKPFEFLNAYFENIGEQKIEIIE
                     ANPFAEAISKFINYEMMSWISSPKNFIRFLREFADNNDIDSKFFPKSSQAISNNLRKI
                     KGSLLEGLDIEIIVERITSGKGNRKLKNTTIVKIRKRSPPAPLAPLNENDEGNVGDSG
                     GDHLNGAVEVSTETITSPLGDNQSRAQITSYKSESGAGGAGGDVFRSFKDDMKKNFLF
                     QCHYCDSKFSSEKDLLKHSINIHPGKPAQPDKTITRLEKEKTNDHLF"
BASE COUNT          970 a          538 c          473 g         1263 t
ORIGIN      
        1 cgtatttatt ggatagtcta gatttgaatc aactgtcttt tctatattat tagtagaaag
       61 gagagttaat agatattttt ggagagtagt cataaaaaat atatatctta tagtatattt
      121 atatgttacc ataatataga tacatttaaa tatatgaaac ctgtgaatga atgaatcgac
      181 tttaactgta agaagcaaat aattatttac atcttataag aatataataa ttgctttttt
      241 gcaatataat atgcagaagt taaaggagat cgaagagcta cagtcttttt aaggtgcgta
      301 agatctttta taatttttcc acattaagtc ttactagcgt tctgtattat cgacctcctc
      361 aaaaaaggtg atcgtttgtt ttttcttttt ctaatcttgt aatagtttta tctggttgtg
      421 ctggtttgcc tggatgtata ttaattgaat gtttcaataa gtctttttca gaactgaatt
      481 tagaatcaca ataatgacac tggaataaaa aatttttctt catgtcatcc ttaaagcttc
      541 tgaaaacatc tccaccggct ccaccggctc cactttcgct tttatagcta gtgatttgag
      601 cacgagattg attatctccc agtggagatg ttattgtttc agtggagacc tcaactgcac
      661 catttaaatg atctccacca ctatctccaa catttccctc atcattttcg tttagtggag
      721 ccagtggagc cggtggagac ctttttcgaa tctttacaat ggtagtattt tttaattttc
      781 tattgccttt tcctgaagta atcctttcga ctataatctc aatatctaga ccttctagca
      841 atgatccttt tatcttccgt aaattgttag atattgcttg ggatgatttg gggaaaaatt
      901 tgctatctat atcgttatta tctgcaaatt ctcttaaaaa tctgataaaa tttttaggtg
      961 aacttatcca tgacatcatt tcatagttta tgaactttga tattgcttct gcaaatggat
     1021 tagcctctat aatttcgatt ttttgttctc ctatattttc aaagtaagca ttgagaaact
     1081 caaatggttt gtaacccatt gctcttgcaa ttgcttcacc ccaaacagca aaatctgcca
     1141 tccttggcaa ttcttctaaa ctcactgtat ctttgatttc taatgctttg gctacaatat
     1201 caaaaatata acccaatagc tgaggagtct gctgttttaa ttcggaatca atcttttcat
     1261 ctggaatctt tttctttgga tctaattttt caagttcaat tcttatgcta cggtctaaag
     1321 cgtcagcttc tttaaatata atatttattc cactaaagct cattcgtttt ttgtatctat
     1381 atggaatatc ttcatcattt gtaaataatt cacgtttgct gaatgcacct cctgtaattg
     1441 ctctgcatgt ttcatcagat aaccacggtg gttcatacct tacattatca taaaaacata
     1501 agaaattatg agaaagttgc tggataaatt gtgtcttatc attatatatt gataataggt
     1561 ctagactgct tggatcaatc aataatttga ttttcttctg aagagtagat ttagcacttc
     1621 cttctggtcc aaacggtaaa accataggaa ttgatataac tggaattaac aaagacacaa
     1681 tccagacttt gataagaatt ttatcagttt cattcttgat atttaatgaa tcaacaaact
     1741 tatcaaggat tttgctatca taatcatgta aaggttctaa ctgtggggat tggtgtccaa
     1801 atcttttgaa taaaacttca atttgatttt caacaatttt ccagctttcg ccttttgtta
     1861 tcttaataca tctacttttt tcatctgtca tgtcgtaata tattgagtct ttagtttcag
     1921 gattggacca tgctattctc aaatgtaaag gaatagtttg acttttaaaa actgcatttg
     1981 cacctaatgt catttttgca ttattaattc cttcggaatt agcactctta ttgtcattat
     2041 tgtcataata taatttggac aaatattttt tgaatttact gccatctata gccattactt
     2101 caaaatgatc attaatcttg accaaagcat agggagtatc aaattcgtct ttaaacaatg
     2161 atgagttttc catggcaagt ttaactagga tatctgcaat tgttcctcct gctgatctgt
     2221 ctccaccgtc tccaccatct ccacccctct catttttatt tataataagg tcgtaattac
     2281 tatccagtgt ttttattaca agtttaatat cttcctcttt tacttcatat tcctcgagta
     2341 tttttttaaa atctttacgg aaatcaagcc atttctttgg gcctgtagta ggaacatgaa
     2401 tcttagtttg cggatattta tggttgaatt ctaaaataag attgttttgt tggttatcct
     2461 tgacaaaact ctgtactata tattcaagtt cctcgcctat ttctagagaa acaataatgg
     2521 gcttattgta attattgtga tcggcttcat cgttatttat gattgtaaag tcttgtacga
     2581 ctttttgaga aaattctaaa gcactctgcc atatactcgt tacttcattt tgaggtagtg
     2641 gtggagaaca tagtatatca ttaacttttg taaaaaagtc ttttaagttt tctttgctta
     2701 ttttatgact atgctttatc aaaacagaat ttgctataga taacaatgta tcatgcctta
     2761 ctccttcttg aataataata tcaggattta tttctaaaga gttaatcatt tgtttaatta
     2821 atggtgttaa atagatagac gacgaagaag tagaagcatc tttcccaatt tttagatatg
     2881 atatattata ttttccacaa atatcattaa tatttgacat tagttttaat gcttcttctg
     2941 atttcaagat tattggtgaa tctgttccct taatctgcca tatggagtct gtttcagagt
     3001 gataggaagg tgtagcacac atcaagcctt taccgttact ttttatttct atacctaaga
     3061 tactatcagg gcttttatct ataaatggaa tttctgaata gaaatagata tgcaggctaa
     3121 aaggatcctt agcattttgt tcaactataa ttttttgttt tatttcatca atgtaagaag
     3181 tatttgctcc aataactgcc ttacaaaatt cctttattcc taattcttta tcaaaatcaa
     3241 atcc
//
LOCUS       DATIAS010000137         2740 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_25070, whole genome shotgun sequence.
ACCESSION   DATIAS010000137 DATIAS010000000
VERSION     DATIAS010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25070"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            751..1089
                     /locus_tag="VLA74_02685"
     CDS             751..1089
                     /locus_tag="VLA74_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49643.1"
                     /translation="MTKFGLYTKSPKIPFETHLYGLDEPIKKQLIDLREFVKDLGMNV
                     IEEIRPHRIVYSKTIAFRVFLDIKPTKEELIVSIRIDRKNPYTTYKVNHSLDLTDIKK
                     EIASAYKNIS"
     gene            complement(1112..1453)
                     /locus_tag="VLA74_02690"
     CDS             complement(1112..1453)
                     /locus_tag="VLA74_02690"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HSF49644.1"
                     /translation="MSNNNPQDTLSKDENVTVNNYFSNIRAHLIISGKVQGVYFRKYT
                     QEISIKNKVSGWVRNLKNGNVECILEGLPSNVEKVIEWCHIGPKNSRVDKIDINYETY
                     TGEFQGFKIDG"
     gene            complement(1856..1960)
                     /locus_tag="VLA74_02695"
                     /pseudo
     CDS             complement(1856..1960)
                     /locus_tag="VLA74_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612400.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(2113..>2740)
                     /locus_tag="VLA74_02700"
     CDS             complement(2113..>2740)
                     /locus_tag="VLA74_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF49645.1"
                     /translation="VKGPELLSKWVGESEKGIREIFRRARQASPCVIFFDEIDSIAPI
                     RGIEHDSMVAERVVSQLLTEMDGIQALSGVVVLAATNRADMIDPALLRPGRFDKIVYV
                     PLPDKKTRYMILKMNSNNKPNSNDVDLEKITELTEGFTGAEVTSLVNVAVSFVLQNYL
                     QKYSSPDEAAKHASEAFVSMKDYENAVKKIKKQREITPNQKVTVPYYR"
BASE COUNT          928 a          439 c          394 g          979 t
ORIGIN      
        1 ttttttcggt aaatgcactg gatctaattt tcagttcttc ttttatttta gttggtaaaa
       61 attctgcatt aaaaagataa tcaaaagttt ttccttgaat aatttcaatg attatttgcc
      121 ctaagactga cttcaactaa tgcgccggct tcatcttgaa ctacaaacta aacgttagta
      181 tgtaatctca tgtatgaatt gttcaaaaga gactgctcat cctttgaagt ccagacttca
      241 tgatgtctta tccagtatgt agagttgatc tagtgaatta taccctctta attgatcttg
      301 agtaaccaaa tattggagac catttggtgt aggaattcaa gatcttttat tacgtataga
      361 gcattggatc aacatgaacg tctctctgga tgaccctcgc aagcaacagg attggaaata
      421 catactaact gtttccccgt aaacttttgt tctacacttt tttcatggga ccaacttact
      481 ggtttacatc tctttttgtt tgtgctttac taatgatatt ttcattatcc gtcttgattg
      541 cttgatcgtc tcaaatactg ttgttattaa cattatactt tgaattattt attatgttat
      601 acttagttgc agatacgatc tttcattatt agtagaaaga atatgcagaa acagaatgag
      661 agacagtagt atacaattca acaataatct aattttttta ctatcttatt agaatatttc
      721 aaatacaaga aacttgattt attgattatt atgactaaat ttggtcttta tacgaaatca
      781 cctaaaatcc catttgaaac acacttatat ggattggatg aaccgattaa aaaacaatta
      841 attgatctga gagaattcgt aaaagatctg gggatgaatg ttattgaaga aattcgacct
      901 cacagaatag tatattctaa gacaatagca tttcgtgtat ttttagacat aaaaccaact
      961 aaagaagaat tgatagtttc gataagaatt gatagaaaaa atccctatac tacatataag
     1021 gtaaaccata gcttggattt gacagatatt aaaaaagaga tagcaagtgc gtataaaaat
     1081 atatcatgat atttttaaat tcagaaattg tttaaccatc tatcttaaaa ccttgaaatt
     1141 caccggtata agtttcatag tttatatcaa ttttatcgac tctactattc ttaggtccaa
     1201 tatgacacca ttctatcact ttttcaacat ttgacggtaa tccttccaaa atacattcga
     1261 catttccatt tttaagattt cgaacccaac cgctaacctt attttttata gatatttctt
     1321 gagtatattt tcgaaaatag actccttgaa ctttaccaga tattattaga tgagctctta
     1381 tattactaaa gtaattatta accgtgacat tctcatcctt agaaagcgta tcttgtggat
     1441 tattattact caatataatc atacgagaaa cgagattatc aaatataaat tatgagaaag
     1501 attataaaag aaattctcct tccacgttaa agatctttaa tgatgtacca tttccaacaa
     1561 gtttgaagtt gctttcactg gttttcgtaa ctatgggtaa aatggtatag agaatgctat
     1621 agatcattat taaggtttga aaatcatgat taagcaaaaa ataataggta tcgtctatcc
     1681 taccaataag tgaaaattca tatgggagac atgaaaaaag ttaaatgaca tttgtactgg
     1741 tttcatcgga ctttcttaat ttaagataaa ttacaccttc tttcaatttt ataataaaat
     1801 agtgctctat tctgcaacta gtttatacaa tcttttttat atatctaatt agcaactatg
     1861 ttgcaattat acttctaaac cagttataca atgatacttt tagcatcatc tcttttacaa
     1921 tgttttcaaa tataatagcc gaaaaatatt ctccaaacat ataattttag taaaagtgat
     1981 aaaataatat tattaacttc aatattgatt atagctaaaa ataaaaatga gatctttctt
     2041 taagcagaat aggtaacaaa atagttttta tcgattattt cataaaaaat aaaataatta
     2101 tgattgccta ttctaacgat aatagggaac agttactttt tgattaggtg ttatttcacg
     2161 ttgtttcttt attttcttaa ctgcattctc ataatctttc atagaaacga aagcttcaga
     2221 tgcgtgttta gctgcttcgt caggagaaga atatttttgc agataattct gcagaacgaa
     2281 ggaaaccgca acgttaacta atgaagtgac ttcagctcca gtaaaacctt ctgtaagttc
     2341 tgttattttt tctagatcga cgtcatttga attaggttta ttattagaat tcatttttaa
     2401 aatcatatat cttgttttct tgtctgggag tggcacatag actatcttgt caaatctacc
     2461 tggtcttagt aatgcagggt caatcatatc agcacggttg gtggcagcaa gaaccactac
     2521 accagaaaga gcttgaatac catccatttc tgttagtaat tgggaaacaa cccgttctgc
     2581 taccatacta tcatgttcaa tccctctgat aggagctata gaatctattt catcaaaaaa
     2641 tatcacacat ggtgaagcct gtcgtgcgcg tctaaagatt tcacgaatgc ctttttcaga
     2701 ttcaccgacc cattttgata gcagttcagg tcctttaaca
//
LOCUS       DATIAS010000138         2063 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_570873, whole genome shotgun sequence.
ACCESSION   DATIAS010000138 DATIAS010000000
VERSION     DATIAS010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570873"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VLA74_02705"
     CDS             <1..279
                     /locus_tag="VLA74_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49646.1"
                     /translation="IGEPLRPIRTVILPKHGVIALGACLHEARAFVEILEEWARFNIY
                     SKIVSMSSGGPIHTLSIDQLRSLGSRYARSIKFGGRQSFLSDYSTVLR"
     gene            577..1401
                     /locus_tag="VLA74_02710"
     CDS             577..1401
                     /locus_tag="VLA74_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49647.1"
                     /translation="MANNLILLVLPILLALTVHISTTEIFAQTGSMFKVGAEGDYAVS
                     IVPGASQKDNTYHYYPPRIAVPTDTTVVWLNGDIGQPHTVTSGQPGAGDEGSVFNSGV
                     MPAFPVRSFEYTFTQAGDYPYHCIIHPWRVASVSVSDAQFTGEAFDIAVGSGATWDLT
                     KNPRVLLEITPKTAVLDGFSPIAYNVTVNDGATNKTMFSGIFTTGGDPLPLELVSGEG
                     NETRSYGPDFSTAGAYHLQSDFKKGSSYPISVQVISFDNRLIDNPARSTFNLQTNP"
BASE COUNT          734 a          318 c          303 g          708 t
ORIGIN      
        1 ataggcgaac cacttagacc aataagaaca gtaattttac caaaacatgg agttatcgct
       61 ttaggtgcat gtttacatga ggctagagct tttgtcgaga tacttgaaga atgggcaaga
      121 tttaatatat attcaaagat cgttagtatg agcagtggtg gaccaattca tactctctct
      181 atcgaccaac tgcgaagcct tggatcacgc tatgcacgct cgatcaagtt tggtggacgc
      241 cagtcttttc tatcagatta ttctactgtt ttaagatagt gttacccata aaaagtatta
      301 taagataacg gtaaaagtta atattcattt gcttctacat ataatttagt atacaaagac
      361 aataaaatga taaacggata acagtagccg agagcggtat atcatcaatt atgataaaag
      421 attaaactat aatcattatt aagaaacaaa tgataaacta tgaaatatct gttgctatat
      481 tttgttacaa cagtcaatta agaaaaattg ataataatat tattaaaaac tataacttaa
      541 ctgaatattt atatattatt cctataaatg attactatgg ctaataatct aattcttttg
      601 gtattgccaa tactattagc tttaacagtg catatatcaa caacggaaat ctttgctcaa
      661 acaggaagta tgtttaaagt cggagcggaa ggtgattatg ctgtaagcat agttcctggt
      721 gcatctcaaa aagacaatac atatcattac tatcctccaa gaattgcagt tccaacagat
      781 actactgtag tttggcttaa tggtgacatt ggacagcctc atacagtaac cagcggacaa
      841 ccgggagcgg gagatgaagg ttcggtcttt aattcaggtg ttatgccagc ttttcctgtt
      901 agatcctttg aatacacttt tacacaagct ggtgattatc cctaccattg tattattcat
      961 ccatggagag ttgcttcagt atctgtaagc gatgcacaat ttactggaga agcttttgat
     1021 atagctgtag gctcaggtgc tacatgggat cttacaaaaa atccacgagt attacttgag
     1081 attactccaa agacagcggt attagatggg ttctctccta ttgcttacaa tgtaactgtc
     1141 aatgatggtg caactaataa aacaatgttt tctggcatat tcactactgg cggagatcca
     1201 cttccacttg agttagtttc tggcgaagga aacgaaacca gatcatatgg accagatttt
     1261 agcactgctg gagcatatca tctccaatca gatttcaaaa agggttcttc ttatccaata
     1321 agtgttcaag tgatatcgtt tgacaataga ctaatagaca atcctgcaag atctacattc
     1381 aatttacaaa caaatcctta acttttttta cttctccata attttttctt taattcagca
     1441 ataactaata ataataataa taataatttc tgataaatat taaaaatcat atgtgtatat
     1501 tgtaaacttt cttatttctt tatatcaagg aaactggata aaataaaata taataattaa
     1561 atatatacta gaatattctg ttatgaaaaa ataaatatta ttaaattatc cgactatatt
     1621 aaaaatttca tagtattgta aaacttaaaa actttgatca aaaatcaata attcttgatt
     1681 ttaatatttt attgctaacc ttctatatag tcactctcat gattgttaca gtaacctcta
     1741 atacttaatt ttttttacat ttatataaat acgttaatat ccaaaagaac taattaaaat
     1801 aagtcttata atacataaat aaagcagata aatgaattcc gcgtccctat ctttcaaatt
     1861 caaattgcaa taattctctt caaaaaatta tatacagtaa ttaaattagt agtaatcaag
     1921 atctgatatt actattttta tgctatttca gatagtattt acaaaaaggg ttttttattc
     1981 ttttaagaga attattacag gatttcaata atactttaaa ttaaagatct tatatacaat
     2041 attatttgtt ttgtgatttg tgt
//
LOCUS       DATIAS010000139         3070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1660708, whole genome shotgun sequence.
ACCESSION   DATIAS010000139 DATIAS010000000
VERSION     DATIAS010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660708"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            580..2001
                     /locus_tag="VLA74_02715"
     CDS             580..2001
                     /locus_tag="VLA74_02715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49648.1"
                     /translation="MVLALIITISVAAINSNSFSQEENTPTPQQQQQKVNKSSQSEIK
                     KLTDNKYYDDWSNINENIITDFNSNISFPKTKNTTTSINQSIAINSNLVDNNDDNDNN
                     DLTLGAWVPINNSLLLQNLKGEEQKKGIQSLLNQGFHEYYFSINNFEDIDSIKSTEEL
                     LKSAEKTSLKIIIILLPPSEGHVNTNYDWKGWIKYFNSLEKKYPKSFEGFTIDDFNWE
                     STKLETKFKWNINFMEYSNLTQILEDKDKNIKFYPTIYFEGWLTDKVATKYNNLTDGF
                     VVASGCYYNVSTLEKELTVFKEIFEKPIRYVVYPAITYNYSRQGYSPPTDQLIQATLS
                     ITSNSSVVDGLIIWHDIDKPVVQEYLVNRDDKAYLSKISNLKELQIREEEGENEEMTT
                     TNSKKRLLGTLNDEQDCQEWSIKYNKAYDILKNLPQQEKENDKWKKEILDILRNDKIN
                     LWLWEDVELSSIIDILRMNYNKK"
     gene            complement(2228..2845)
                     /locus_tag="VLA74_02720"
     CDS             complement(2228..2845)
                     /locus_tag="VLA74_02720"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSF49649.1"
                     /translation="MIPRPYIKIEETATGPTEITNSDLAYLGYSCNGCGGLTFYGGEN
                     SILKNNDIHHIYKGFYSKEMKHMLIEGNRVYGNERYGIDPHTGTHNMTIRNNTVYDNG
                     YSGIICSLDCYNIIIEDNEVYNNGNTGKGRGIAFSINMYDSVARNNYVHHQNIGIDIS
                     GKSHDNKVYNNRVSDSKVGINTFEKSSNNNVYNNTILKTIIPYRR"
BASE COUNT         1136 a          426 c          409 g         1099 t
ORIGIN      
        1 taattatttt gttgtgatga gtaagtttgt gcatctactg tcatcaacaa tgatgatgaa
       61 gatacagcaa ttattcatgc aattagtaca attgataaga atattgtact ggttagtttt
      121 ttgatctgat tttattattt atattgggat acaatattat ataatattta aatatattgg
      181 acaattatat tgaaatatga attattctga ataatattaa gatacgataa tttgatttta
      241 aaaatattta caatatgtcc atgatttaag atacagattg ctaaactttg ggatatagat
      301 attgctatga ttaaaaataa tatgttgaat aaaaaggttt caaaaaatgg aatttattaa
      361 ctataataat taggtaaatg gaaaaagtat ttttatatac tattaagtta gtaccaaaag
      421 tggtatttat tgactataat gattttacat atacaacaat tgctgtatgt atttagattt
      481 tttagttgta tattcaatta ttacctaaat acataaatat agaacaaaat atttctatca
      541 gagaatatga gattattttt tcaatgctca tttataataa tggtattagc attaataata
      601 acaatatcag tagcagcaat aaacagtaat agtttttctc aagaggagaa tactccgact
      661 ccgcagcaac aacaacaaaa agtaaataaa tcatcacaat ctgaaataaa aaaacttact
      721 gataataagt attatgatga ttggtctaac attaatgaga atatcattac tgattttaat
      781 tcaaatattt cttttcctaa aacgaaaaat actactacgt ccattaatca gagtattgca
      841 ataaattcaa atcttgttga taacaatgat gacaatgaca ataatgatct taccttagga
      901 gcctgggtcc ctataaataa tagtcttctt cttcaaaatt tgaaaggaga agagcaaaaa
      961 aaaggaatac aatctcttct taaccaaggc tttcatgaat actatttttc cataaataat
     1021 tttgaagata tcgattctat aaaatcaaca gaagaattat taaaatctgc agagaaaact
     1081 agtctaaaaa taataattat tctccttcct ccatcagagg gtcatgttaa tacaaattat
     1141 gattggaaag gatggataaa atactttaat tctcttgaaa agaaatatcc aaaatcattt
     1201 gaaggattta ccatagatga ttttaattgg gaaagtacaa aacttgaaac aaaatttaaa
     1261 tggaatatta attttatgga atattccaat cttactcaaa tacttgaaga taaagacaaa
     1321 aatataaaat tttatccaac aatatatttt gaaggttggt taactgataa agtagccaca
     1381 aaatataata accttacaga tggatttgtt gtagccagtg gatgctatta taatgtttcc
     1441 accttagaaa aagaattaac tgtctttaaa gaaatttttg aaaagcctat tagatatgtt
     1501 gtctatcctg ccattacata taactattct agacaagggt atagccctcc aacagaccaa
     1561 cttatacagg ctactttatc aataacatcc aattcttctg ttgttgatgg attaatcatt
     1621 tggcatgata tagacaagcc agtagtgcaa gagtatttgg ttaatagaga tgataaagca
     1681 tatctatcaa aaatatctaa tttgaaggaa ttacagatta gagaagaaga aggagaaaat
     1741 gaagaaatga ctacaactaa ttctaaaaaa agattattgg gtactctaaa tgatgaacaa
     1801 gattgtcaag aatggtctat caaatataat aaggcatatg atatattaaa gaatctacct
     1861 caacaagaaa aagaaaatga caaatggaaa aaagagatat tggatatctt aagaaatgat
     1921 aaaataaact tgtggttatg ggaagatgtt gaattaagtt ctataataga tatcttaaga
     1981 atgaactata acaaaaaatg acaatagatg ataatttgaa ttatctttta aacctattct
     2041 atcaatcacg tctattaaaa tcaacatctt cattgaattt ctctatgata tcctcatcaa
     2101 ctttctcatc acacttactt ccaaacttat ccgataaatc cctcatgtgt tcacgaatga
     2161 tatctttgta ttcatttgga tttatattct catcatctaa tacatctcaa aatcttttag
     2221 atcatcctta tcggcggtac ggtataattg tcttcaggat ggtattattg tatacgttat
     2281 tgttagaaga tttttcaaat gtatttattc caactttgct atctgaaact ctattgttat
     2341 agactttatt gtcatgtgat ttaccactta tatctatacc tatattttgg tgatgaacat
     2401 agttatttct tgcaactgaa tcatacatat tgatactaaa tgcaatacct cttccttttc
     2461 ccgtgttacc attgttgtat acttcattat cttcaattat tatattgtaa caatcaagtg
     2521 aacatataat gcctgaatat ccattatcat aaacagtatt atttcgaatt gtcatattat
     2581 gagttccagt atgaggatca attccatatc tttcattgcc ataaacgcga tttccttcaa
     2641 ttaacatatg tttcatctcc tttgaataaa atcctttgta gatatggtgt atgtcattat
     2701 tctttagtat actgttttca ccaccgtaaa aagtaagtcc tccacatcca ttacaactat
     2761 atcccaaata tgcaagatcg gaattggtaa tttcagtagg tcctgttgca gtttcctcaa
     2821 tttttatgta tggtcttggt atcattttat aaattgaagc atcttctttt gctttttcac
     2881 taaattttac ataatcattg gtttgtggat tccaagatgt tatcttttac agaatctact
     2941 ttgagacttc catctacttc aattgcatta ggagatttct tggatggaat tatctttaac
     3001 catgttatat cattcgaatt gatatccaat aatgcatttt tttcaacttt taaacctgca
     3061 ttaagtaacc
//
LOCUS       DATIAS010000140         5161 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_571100, whole genome shotgun sequence.
ACCESSION   DATIAS010000140 DATIAS010000000
VERSION     DATIAS010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5161
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_571100"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(582..902)
                     /locus_tag="VLA74_02725"
     CDS             complement(582..902)
                     /locus_tag="VLA74_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49650.1"
                     /translation="MTNNYSNSKHNNKSIIIPSRIQLTYHNLHNLQNIVKWKDQRLEL
                     VKIPKGLIEVLQNAGFTIEKILDSEPSHIAEKLGIDSYIGEIILKETKKAISKINPDL
                     LLIN"
     gene            1801..2229
                     /locus_tag="VLA74_02730"
     CDS             1801..2229
                     /locus_tag="VLA74_02730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49651.1"
                     /translation="MNKNNKIKKKNILIVDDDINTSLKYKKWLEEEENIDGNFNITLI
                     NDPNMAEQIFKPENYDLVIGFRMSVMDGFDLYNKLHDLSKKVQQDTSPSNDFRVCFMT
                     SSVINYKVLAEIHPELGEECYLSKEVPKDVFIKHVYSLIQ"
     gene            complement(2458..2811)
                     /locus_tag="VLA74_02735"
     CDS             complement(2458..2811)
                     /locus_tag="VLA74_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HSF49652.1"
                     /translation="MSSNIRSTSTFHNPKYAECIEACNHCANACEYCGSLCLREENVK
                     MMIKCIELCFYCADVCRFASKYMSIDSSYAKQICETCAKVCEACAKECERHDMDHCKQ
                     CSQVCYECAKVCRSM"
     gene            complement(3125..3808)
                     /locus_tag="VLA74_02740"
     CDS             complement(3125..3808)
                     /locus_tag="VLA74_02740"
                     /inference="COORDINATES: protein motif:HMM:TIGR02271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HSF49653.1"
                     /translation="MESTDKFPWNEIIKKEARGIDDADFGEIQSVDPEYVITQKGIID
                     KEIFSFRTNLVQDYDGNRVLFKVTEEEARNSYMQSQNKDDYGRGIETEITTNGESLSN
                     ITENEEVIPLKSEELDINKRVVEDEKVITKKPVKETKTVEVELNREEIESIEKRPPSD
                     ESEGEAQNPIQTPQEIKIPVRREEAEVTKKPYVKEEVVIKKKIVTDKKEITDEITSEE
                     LDTSNVDKE"
     gene            4692..>5161
                     /locus_tag="VLA74_02745"
     CDS             4692..>5161
                     /locus_tag="VLA74_02745"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF49654.1"
                     /translation="MEHKLCYNRIKYNKIKNKDHYNNKNNNNKYNLCLPSISKLQDNN
                     NNNNIHNLTILMVSTEYPPMLGGVGRYTHNLTRELRKVGNIVYVVCNKKGDGDFFGLS
                     PFNKNNSELLLKIVYKVKPDIVHIQFEHGLYGLKLASLNPRNTCTTIDTFYDIC"
BASE COUNT         1835 a          716 c          655 g         1955 t
ORIGIN      
        1 tatttatttg cattttatat ttgatttttt tcagattctg cagatataag aatgtgaaaa
       61 tatatttagc atactttttc ggattgaaga tagaagattg cttttttaat ttgttattca
      121 aactattcct aaataatctc tttgctaaag cctagttata aaacacatgc aataagttat
      181 ttagtaattt gatataattt attggtgaaa gaagaagaaa gccagagccc tcaatgaatc
      241 agaatagcaa gcagaaatgg tagtagtagg ctatgacgtt agattatgct gccttattcc
      301 ttgtaaacaa tttctagact agaagttatt tattatttga ttaacattgt taattaacaa
      361 attatttaaa gatagaagaa agccatagcc ctctaaggac atattcataa caatagaagg
      421 ctattttgtt tgttattctt tggactatac acctatatct atgtagatac ggtacacaaa
      481 tctggaaacc atactatata atacttttag aggtaattta attaataatt gtgttatacc
      541 tgcagttcaa tatcttccac ttgctaaata aagtattttt attaattaat taatagcaaa
      601 tcaggattta ttttgctaat tgctttcttt gtctctttga gtattatttc accaatatag
      661 gagtctattc ctagtttttc tgcaatatga gaaggttcac tatctaatat tttctcaatt
      721 gtaaaaccag cattttgtaa aacttcaatt agtccttttg gaatctttac aagttctaat
      781 ctttgatctt tccattttac tatattttgt aaattatgaa gattatggta agttaattgt
      841 attcttgaag ggataattat tgatttatta ttatgtttac tattactata attattagtc
      901 attgtagtgt tattatatag gtctctagat ttataacgac gatctattat ttctatatag
      961 atttctatct ttactataat caaataccta aaaattacat cttttaagga atggaagcgt
     1021 ttggaaggct atggttatga caaatattca atatatttca ataatcttat aaaaaataat
     1081 aaaatatata ctctaaattc gaattacaag aaatgaatct acaaaagatt agaaaacaaa
     1141 tttcaaaatc ggttgataaa ttctagattt tgcagaagat aagaaaaaag aagaatgagt
     1201 aatattaata caattaatct taaaccttgt tcctataatt gtggtactag aatctattgg
     1261 aacaatgagg aaaatgctta ctttgaagtc tttagtggca aaaagcatgt ttatccgaat
     1321 aggtccaaat ctgtaactcc aactacctta tactattata tgaaaaatgt aaattatatt
     1381 atgacgatat gctatcaaat ctgaaagaaa taaaaaaagc aaatggaaca agcgtcttta
     1441 ttatttcaaa atgtgcacac tgtggaaagg aaatggaaat atttgtcaac aacaatgtta
     1501 ttgaagtatt atgcagagat tgtaatatat ggaaaagata ttaatttaaa tattattttt
     1561 tgaaatttaa aatttaaatt aatattaaaa ttgaacctta tctaatatga tttgtgtctt
     1621 tagtaaagat ccaataactg gtttaattga tttgctggta tattatgaag ttcctgcaaa
     1681 ggtaaaagag aggaagttaa acagagattc aatagtaatt ttgtttatac ccaaaattat
     1741 caataaaaga tttatcatct tccttaacac aataacaata aagaagaatc tgatcaatgt
     1801 atgaataaaa ataataagat taagaaaaaa aatatactga tagtcgatga tgatattaat
     1861 acttctttaa aatataaaaa atggttggaa gaagaagaaa atatagatgg aaatttcaat
     1921 ataactttga taaatgatcc taatatggca gaacaaatct ttaaacctga aaactatgat
     1981 ctagttattg gttttagaat gtccgtaatg gatggttttg atctttacaa caagttacat
     2041 gatttatcaa aaaaagttca acaagataca tcaccatcaa acgactttcg tgtatgcttt
     2101 atgacttcat cggtaataaa ttacaaagtt ttagcagaaa ttcatcctga attaggagaa
     2161 gaatgttatt tatcaaaaga ggttccaaaa gatgttttta tcaaacatgt ttactctcta
     2221 atacaataat aataataata ataataataa taaagtagat ggatgttaca cagaggctac
     2281 aatatataac acccatcacc ctgcaacaat cacaacaact aatggagatc cggctatctg
     2341 attgtatgtg tatgacatat accgatgctt atagacattt atagtagcaa gtaatagtaa
     2401 aagcaggtaa aataaaaaat ttttgatttt tttattttat attgttgttt catatcttta
     2461 catacttcta catacttttg cgcattcata acatacttgc gaacattgtt tacaatgatc
     2521 catatcatgt ctttcacatt ctttggcaca tgcttcacat actttagcac atgtttcaca
     2581 gatttgtttt gcataactac tatcaataga catatacttt gaagcaaatc tacagacatc
     2641 tgcacagtaa aaacatagtt caatgcattt tatcatcatt tttacatttt cttctcttaa
     2701 gcatagagaa ccgcaatatt cacatgcatt agcacagtga ttgcacgcct ctatacattc
     2761 tgcatatttt ggattatgaa aagtgcttgt tgatctaata tttgaactca ttatgatata
     2821 caaaaaacgt tattttataa aataattata tagaattttg ttgttcttat ttattataga
     2881 acgttccatt taataaccct agccctctat tattagtagg agcaattaga aggctatggc
     2941 tatggattat gtatgtcttt atttgtgtct atgtatctct tcaaaacttc tttctcttta
     3001 tagcactcga cagatagact aatgcaggaa acgaaggata atttttaaaa atgatattta
     3061 atgctcaaaa ttaatattcg taatataaaa ttacagataa aaaaatttgt agtatttatt
     3121 tgtcttattc tttatctaca tttgaggtgt ctaactcttc agatgtaatc tcatctgtta
     3181 tctctttttt atcagtaact atcttctttt ttatcacaac ttcttcttta acataaggct
     3241 tttttgtaac ttctgcttcc tctcttctta ctggtatttt tatctcttgt ggtgtctgaa
     3301 taggattttg tgcttctcct tctgattcat cacttggagg tcttttttca atactttcaa
     3361 tctcttctct gtttaattca acttctactg tttttgtttc tttgactggt tttttggtaa
     3421 taactttctc atcttcaaca actcttttat taatatctaa ttcttctgac tttaacggaa
     3481 taacttcttc attttctgtt atattgctta aagattcacc attagtagtg atttctgttt
     3541 cgattcctct accataatca tctttatttt gagattgcat atacgaattt cttgcctctt
     3601 cttcagttac tttgaacagt actctattac catcataatc ctgaactaga tttgttcgaa
     3661 aggagaaaat ttctttatca attatacctt tttgagttat gacatattct ggatccacac
     3721 tttggatctc accaaaatca gcatcatcaa ttcctcttgc ttcttttttt ataatttcat
     3781 tccatggaaa cttatcagta gactccacag agtattttat tcaataaatt atttaatgat
     3841 tcatagatta taattatatt ttttataata actatgaatt aaaaatgcat tattgaaatg
     3901 actacaattt cttattttct tcctttcttt tttctaatct tctaaattca agtttatatc
     3961 tactacttct aggtccattt cttaatctac aactacaaca agggcaccaa atatctttcc
     4021 aagtaatata tatcacaggt ctgacaacgt ttttgtcctg ttatataacg tcctccagat
     4081 tggggtctac ttgccttgta atgcatacaa attcctttac aacccattat tattggttaa
     4141 agtaaacctt gtttgaaact ataataatct atctacatat caccaaagtc ttcgttattt
     4201 attccccttg cttctctttt tataacatca ttccaaggaa ttacattaga actcataagg
     4261 attactactt tacaattaat ttaattttga gataatttaa ttaatatcac tttatagttt
     4321 gaactacttg aacaggtttg tggaatgaaa gatcatctat gaaaatattg ttaactatgc
     4381 caagagagtt ttagataaat atgaatataa atatcattta gtaataagag atgcttatat
     4441 tattcgttat tgaaactctg agaaatgtaa aacaataact aaatagcaat atattcaaaa
     4501 tttcattttt ttacgttaaa attatgaaaa atatatattt ataaaagtcg ttatcttttt
     4561 aacagattcc atcagtaatt gcgaaataaa tattattgtg tataagttaa taggataatt
     4621 tagttcatat tcacattaat aaaatttgtt acactttaca tattgtttga taagaaagga
     4681 agttataaaa tatggaacac aaattgtgtt ataatcgtat taaatataat aaaattaaaa
     4741 ataaagacca ttataacaac aaaaataata ataataaata caatttatgt cttccttcta
     4801 tttcaaaatt acaagataac aataacaata acaacataca taatctgaca atactaatgg
     4861 tatcaacaga atatcctcca atgttaggag gagttggtag atatactcac aatttaacaa
     4921 gagaattacg taaagtagga aatattgttt atgtggtttg taataaaaaa ggtgatgggg
     4981 atttttttgg tttgtctcct ttcaataaaa ataattcaga actattatta aaaatagtat
     5041 acaaagtaaa accagatatt gttcatattc aatttgaaca tggattatat ggtttgaaat
     5101 tggcttcact aaatccaaga aatacttgta ccactattga cactttttat gatatttgtg
     5161 a
//
LOCUS       DATIAS010000141         2710 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1797759, whole genome shotgun sequence.
ACCESSION   DATIAS010000141 DATIAS010000000
VERSION     DATIAS010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797759"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(501..1208)
                     /locus_tag="VLA74_02750"
     CDS             complement(501..1208)
                     /locus_tag="VLA74_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49655.1"
                     /translation="MLPQKTKIFAVLMATMMSLGSLSLMPLNVYASHSFEAGVQGDNI
                     PDNTHVNLNGITLKQLQVVPLYDASPNFVSGHFLLQGPCEGGIPNDETNDDDGDGTPF
                     EPKVSVIAGHIDESTDNTYVDWVPLYYISHASFNPGTCIYHSHIPDPLNGGAPRITDV
                     DLVNFNKQPISFSPGDAVDINIQRVLGNIENFYENNLAFPTKLPENLFQEFQNGQNNP
                     VFDLNDKDPNNDGLGHE"
     gene            1408..2133
                     /locus_tag="VLA74_02755"
     CDS             1408..2133
                     /locus_tag="VLA74_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49656.1"
                     /translation="MKKLSEYSSAIFVILVAGIAIISGSTLSINEAMAFPHASIIIES
                     DEGHVNPIELVLGHSNEPAYGKLPGIHDGKHNVEVRLSDANTVLPLQGGEDLEPTTLL
                     VDKYYFKDTESFQRAQSLEQADDVELDAPITSVFGQPGLYYNRQVIDSGIYGYTIKGV
                     LNYYDQGLVPVDVTKFCSIDGEDLTKFDRPMQNPNNPESGWQGSFGCPQNIKDIFFPR
                     DGNKYPNDGYPPQYPQNDEPGNY"
     gene            complement(2368..>2710)
                     /locus_tag="VLA74_02760"
     CDS             complement(2368..>2710)
                     /locus_tag="VLA74_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49657.1"
                     /translation="INISLYNNNQINNRNNETDLIKLNNNNKKESDDKVKMLVSSSIS
                     KSGILWNITDSFSKEEFLMSEINPTTMSYNLILEVKPTKNVVSGNYTLTISARYENII
                     TYSKILDMIIR"
BASE COUNT          941 a          398 c          412 g          959 t
ORIGIN      
        1 gaataattgt ttcatctatt atgaatccag atattcgttt ccttttgtta tagatctgac
       61 atgaatcaaa cctttgtatc caatctcata cagcaatatg acttcttttt tcgtccttgc
      121 atatatctaa tggtttggaa gtattatgta gacttaaatc aagaaaatac aaatacaacg
      181 agtacataac tacaatagtt tatgttcttt attcctttca aattctagta acatacaagt
      241 tagaatagga cattcacggc taaatctatt tccttaactt aacagagcct ctttatcttt
      301 tgtatattaa taatcttatg gtatattcga tgaatgtaca tgattattaa taaaaataac
      361 ttaaagaata gagaataaat tttaccatat taaatagtaa caagagattt ccttattgaa
      421 ataaatatag agattgaata aaagaatttt atattattgc taaaaaaaga aaatattgtt
      481 aattgactag aataaatcta ctattcatgt cctaaaccat cattatttgg atctttatcg
      541 ttcaagtcga aaactggatt attctgacca ttttgaaatt cttgaaatag gttttcaggt
      601 aattttgtag gaaatgctag attattttcg tagaaatttt ctatatttcc aagcactctc
      661 tgaatgttta tgtccactgc atctccaggg ctaaaggata tgggctgttt attgaagttt
      721 actaagtcaa catcagtaat tctgggagca cctccattta acggatcagg gatatgggaa
      781 tgatatatac aggtacctgg attaaaagaa gcatgggata tatagtataa tgggacccag
      841 tcaacatatg tattatctgt ggattcatca atatgacctg caattacaga aacttttggt
      901 tcaaaaggtg tgccatcacc gtcatcatca ttggtttcat cattgggtat gccaccttca
      961 catggacctt gtaacaaaaa gtgccctgaa acaaagttgg gactggcatc atataatgga
     1021 acaacttgaa gttgttttag agttattcca ttcaaattta catgtgtatt atctggtata
     1081 ttatcgcctt gaactcctgc ttcgaagcta tggcttgcat atacatttaa aggcatcaaa
     1141 gataaagatc ctaagctcat cattgttgcc atcagaactg caaatatctt agttttttgt
     1201 ggtaacatta gtttgaaaat actaatggaa tataaaaaac atttgataca ttcatcgaac
     1261 acaagaaata ttttaagtta aaaaattaaa cgatgttgtt taaaaaaata tcttcttaat
     1321 atttatatgt ctatatatta gggaaaatat tttgcattcg acaaatgtac caatgtattt
     1381 ttattattgt tatgaactgc tttttgtatg aagaaattat ctgagtattc atcagccata
     1441 ttcgtcattc ttgttgcagg tattgccatc atttcaggaa gtactttatc tataaatgaa
     1501 gctatggcat ttccacatgc aagtattatt atagaatcag acgagggaca tgtaaatcct
     1561 attgaacttg tcttaggcca ttcaaacgag ccagcttatg gtaaactacc tggcatacac
     1621 gatggaaaac ataatgtgga agttagatta tcagatgcta atactgtatt accacttcaa
     1681 ggtggtgaag atttagaacc tactacgctc cttgtagata aatactattt taaagacaca
     1741 gaaagttttc aaagggcaca aagtcttgaa caggcagacg atgtcgaact agatgctcca
     1801 attacttcag tatttggtca acctggtcta tattacaata gacaagttat cgattctggt
     1861 atatatggtt atactataaa gggagtactt aattactacg atcaaggttt agtacctgta
     1921 gatgtaacaa aattctgtag tattgatgga gaagatctta ccaaatttga taggccaatg
     1981 caaaatccaa ataatcccga gtcaggttgg caaggaagct ttggttgtcc acaaaatata
     2041 aaggatatat tcttcccacg agacggtaat aagtatccta atgatggtta tccacctcaa
     2101 tatcctcaga atgatgaacc tggcaactac tagaacaaga tggttatgac aataataaga
     2161 ggtattaact aacgacggtt aaatataata aataaaaaat taattaacat tacttccttt
     2221 ttttagattg attacatcat ttactttatc acttcataca ataatacaaa aaagtattta
     2281 aatttgagaa caatcaagaa taagataatc tattgaaata atggtataag aaattctggt
     2341 attatatata ataaccaaga aactttttta tcttattatc atgtccaaaa tttttgaata
     2401 tgttataata ttttcatatc ttgcactaat tgttaatgta taattgcctg agactacatt
     2461 tttagttggt ttgacttcta gtattaaatt atatgacata gtagtaggat taatttcaga
     2521 cattaaaaat tcctctttac taaaactatc agtaatattc cacagtattc ctgattttga
     2581 aattgaagat gaaacaagca tctttacttt atcatctgat tcttttttgt tgttgttgtt
     2641 taattttatt aaatctgttt cattattcct gttatttatt tgattattat tgtataaaga
     2701 tatattgatt
//
LOCUS       DATIAS010000142         2941 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1661328, whole genome shotgun sequence.
ACCESSION   DATIAS010000142 DATIAS010000000
VERSION     DATIAS010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1661328"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VLA74_02765"
     CDS             complement(<1..511)
                     /locus_tag="VLA74_02765"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HSF49658.1"
                     /translation="MKSLDKIILGSLYVSNLDKDVEFLQRLQDRYQLDKKFFYSRILD
                     LTKIGLIEKNKDSNFRLSTLGRETLTVVLVGGVFDILHPGHISTLKSAKSYGDVLIVI
                     IATTSTATKIKKNRVIYHNEELRKEMVSALSFVDLALIGRKGTLFDTVEYVRPDIIAL
                     GYDQTHTEKY"
     gene            759..974
                     /locus_tag="VLA74_02770"
     CDS             759..974
                     /locus_tag="VLA74_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49659.1"
                     /translation="MTKFCPECGGELKLEPSTKNFICRSCGLYASREKMDELRDKSEI
                     NYQDPKKRMHDDYLDWWQSSKKEKQKN"
     gene            complement(985..1485)
                     /locus_tag="VLA74_02775"
     CDS             complement(985..1485)
                     /locus_tag="VLA74_02775"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSF49660.1"
                     /translation="MSFKQNILDYVNYKIIDVLSKNSSLPFVELAKQIGISDATVHTR
                     VKKMISTGIIKKFSVIIDNNLVGYDHLAFIMVKLENGKTDQAVAILEEIEQILEIHEI
                     YDKFDLLVKIRSKSLENMRDIIVNKILSITEVKEIELMTVLRTRKEEQMVSLRTEISE
                     KSKDFF"
     gene            complement(1796..1918)
                     /locus_tag="VLA74_02780"
     CDS             complement(1796..1918)
                     /locus_tag="VLA74_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49661.1"
                     /translation="MSGMAYQSHYLIVAMDMFAVLSHNVNKNKKERGIKGNSMK"
     gene            2061..>2941
                     /locus_tag="VLA74_02785"
     CDS             2061..>2941
                     /locus_tag="VLA74_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00269 family protein"
                     /protein_id="HSF49662.1"
                     /translation="MSQPVCSKCYNKNSIYFRPYSGEYLCKSCFIFSIEEKTSRTISK
                     FSMMLYGDRIAVGVSGGKDSLSLLSIMKKITQKKNMKDLVAITIDEGISGYREESLTL
                     VKDFCAKLNIKNEIFGYKDLFGMNMDNAISSRPSEKMTSCSICGTFRRRAIDIAAQNL
                     GVNVIATGHNLDDQLQSFLINIISGDVNRIGWIYPEPIQYGFHHLKKIKPFIEIYERE
                     IVFYALQQNIPFQSEQCPYMNESIRSDMRNFFNSLEEQRPGIKYNTYKSLMKISKTLN
                     SSNDSLSNKCSTCGHEST"
BASE COUNT          999 a          468 c          398 g         1076 t
ORIGIN      
        1 tatatttttc tgtatgtgtc tgatcataac ctaaagcaat aatatctggt cttacatatt
       61 caacagtatc aaataaagta cctttccttc ctatcaatgc tagatctaca aaacttaagg
      121 ctgagaccat ttcttttctc aattcttcat tatggtatat tacacgattt ttttttattt
      181 tagttgcagt agatgttgtt gcaattatta ctatcagaac atctccatat gatttagctg
      241 acttcagtgt ggatatgtga ccaggatgta atatgtcaaa tacacctccg actagcacta
      301 ccgttaaggt ttctctacct aacgtgctca atctaaaatt gctgtcttta tttttttcaa
      361 ttaatccaat tttagtcaag tccaatattc gtgaataaaa aaatttttta tctaattgat
      421 atctatcttg cagacgctgt aaaaattcca cgtccttatc taaattgctt acgtatagag
      481 agccaagtat tattttgtct aatgacttca attcgatccc aaaatatttt ttattgtagt
      541 gtctctaatg ttatatattt gtttgatccc tacaaatttt tgaaaattcc ctttccaata
      601 atatatttaa aaatacaact acgatgatat ttccttttta gacgcaattc aataaagata
      661 ttaaaataga taatcatatt tttaattttt accatttgag atatacctca taactttctc
      721 ataatccttt tattaggtta cgagtaaata ttgttcgatt gaccaaattt tgtcctgagt
      781 gtggtggaga actgaaattg gaaccctcta caaagaattt tatttgtaga agttgtggac
      841 tctacgcatc tcgtgaaaaa atggatgaat tacgagacaa atctgaaatc aactatcaag
      901 accctaaaaa aagaatgcat gatgattatc ttgattggtg gcaatcttca aaaaaagaaa
      961 agcaaaaaaa ttaatatttt tttcttaaaa aaaatctttc gatttttcag atatttcagt
     1021 tcgtagggag accatttgtt cttcctttct ggttctcaag actgtcatta attcaatttc
     1081 tttaacttcc gttattgata aaattttatt cactataata tctctcatgt tctctaaact
     1141 ttttgaacga atttttacta ataagtcgaa tttatcataa atctcatgta tttctaaaat
     1201 ctgttcgatt tcttctaata ttgcaacagc ttgatcagtt tttccatttt ccaattttac
     1261 cataataaaa gccaaatggt catatcctac caaattattg tcgatgatga cagaaaattt
     1321 ctttattatt ccagtagata tcatcttttt aacccttgta tgtacagtcg catcagaaat
     1381 cccgatctgt tttgccaatt cgacgaatgg cagcgaagaa tttttactta gtacgtctat
     1441 tattttataa ttaacataat ctagaatatt ttgtttaaaa ctcataagct agatctaatc
     1501 ttatattata ttagttttaa tatgtctaat atttctaatt tataggaaat taatcatttt
     1561 tttccatatt tggatactac atacaattaa ttaccttcag atttttcaga aaatatcaaa
     1621 ttgcttgcta aaaatgctta atgcttgaat attcaaacga ctttatctgc tactttcata
     1681 aatatgtgat aaaaccttaa aattgattaa tattatttat atgatacact aaattttccc
     1741 tagtttcttt caaagggttt gatatgacga aatgtaatca tcatcttatc ttcactcatt
     1801 tcatgctatt tccttttatt cctctctcct ttttattttt attaacatta tgagataata
     1861 ctgcaaacat atccatagca actataaggt aatgagactg atatgccatg ccactcatta
     1921 tacacttgtt cggtagtata gcagaaatcc ctagcatatg ctagtctgtt ctgggattat
     1981 aatagataaa aggagaagac atgtattaag cagttacata acaataataa tgactaatat
     2041 tcactaattt cagtgatata atgtcacagc ctgtttgttc aaaatgttat aataaaaata
     2101 gtatatactt tagaccatat tctggtgaat atctatgcaa gtcatgtttt attttctcaa
     2161 tagaagaaaa aacatcaaga acaatatcga aattttctat gatgctgtat ggcgatagaa
     2221 ttgccgttgg tgtttcgggt ggaaaagata gtctatctct tttatctata atgaaaaaga
     2281 tcacgcaaaa aaaaaacatg aaggatctgg ttgctataac aatagacgaa ggaatatcag
     2341 gatacaggga ggaatcttta acattggtca aggatttttg tgcaaagtta aatataaaaa
     2401 atgaaatttt tggttataag gatttatttg gcatgaatat ggataatgct atctcatcac
     2461 gtccttctga aaagatgacc tcttgttcta tttgtggtac ctttagacga agagctattg
     2521 atattgcagc tcaaaatcta ggagtgaatg ttatagctac cggacataat ttagacgatc
     2581 aacttcaatc gttcttaatc aatattattt caggagatgt gaatagaatt ggatggatat
     2641 atcctgaacc aattcagtat ggatttcatc atctcaagaa aataaaaccc ttcatagaaa
     2701 tctatgaaag agaaatcgtt ttctatgcac ttcaacaaaa cattccattc caatctgagc
     2761 aatgtcccta catgaatgaa agtattagaa gtgatatgag aaatttcttt aattcacttg
     2821 aagaacaaag acctggaatc aaatataata cctataaatc tctcatgaaa atatccaaga
     2881 cgttaaattc ctctaacgat tcccttagta ataaatgtag tacttgtgga catgaatcta
     2941 c
//
LOCUS       DATIAS010000143         2405 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_26527, whole genome shotgun sequence.
ACCESSION   DATIAS010000143 DATIAS010000000
VERSION     DATIAS010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26527"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VLA74_02790"
     CDS             complement(<1..416)
                     /locus_tag="VLA74_02790"
                     /inference="COORDINATES: protein motif:HMM:NF021039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HSF49663.1"
                     /translation="MDSLSFLVVALISGAIAGTVFGLINLVLVEPYLDKAIGIEVQNS
                     INADEEVNLEEHVSYRFWQKGGQVAAGTILGMTFGSLLGIVFVFGKKIISGSNIKKAL
                     VLSGVIWLVIFMIPAIKYPANPPTVGDADTIYYRQF"
     gene            complement(441..656)
                     /locus_tag="VLA74_02795"
     CDS             complement(441..656)
                     /locus_tag="VLA74_02795"
                     /inference="COORDINATES: protein motif:HMM:NF021038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB domain-containing protein"
                     /protein_id="HSF49664.1"
                     /translation="MSFRKQIQISETKIPKAAIGLLIFVLVFGFFIVGYDQGQLFSLV
                     QGEQAYNDLWIHEFLHDMRHAAGFPCH"
     gene            782..1411
                     /locus_tag="VLA74_02800"
     CDS             782..1411
                     /locus_tag="VLA74_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4443 domain-containing protein"
                     /protein_id="HSF49665.1"
                     /translation="MKLLEKVVERYTPARQLSFNIVHIFKALQLAKINGHISRDLLRK
                     ELSLGDGSVKTLIKHLKMTNMIKTSNAGTILTEKGEKIISQILSCIPNETDIQKSSIT
                     IGKFNYVVLVKDMADAIKSGIEQRDIAIKAGARGATTLIFHNGIFLIPGTNFNALSKE
                     PQIQKRLIESLHPENNDVIIIGSDNKSRRIAELATKYAALFTIINHVKH"
     gene            complement(2039..>2405)
                     /locus_tag="VLA74_02805"
     CDS             complement(2039..>2405)
                     /locus_tag="VLA74_02805"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSF49666.1"
                     /translation="SANKPIGNDYDLITFFDCLHDMGDPIGAMKFAKQSLKPDGTCMI
                     IEPMANDKIEENLNLVGRTYYAASTLVCVPNSLADNGPALGAQAGEKKIKEISEAAGF
                     TKFRRAIQTLFNIIYEAKP"
BASE COUNT          932 a          341 c          343 g          789 t
ORIGIN      
        1 aaaaattgtc tatagtatat tgtatcagca tctcctaccg ttggagggtt tgcaggatat
       61 ttgattgctg gaatcataaa gataactaac catattactc ctgataatac aagagctttc
      121 tttatattgg aaccagaaat aatttttttg ccaaaaacaa atactattcc taataaagat
      181 ccaaatgtca ttcctaatat agttccagca gcgacttgtc cacctttttg ccagaatcga
      241 taactcacat gttcttcaag atttacttct tcatcggcat taattgaatt ttgtacttct
      301 attccaatag ctttatctaa atatggttct actaatacaa gattgataag gccaaagact
      361 gttccagcga tagcaccaga aattaaagca acaacaagaa aagataaact atccataata
      421 attatcacaa gattatgaaa ttaatgacat ggaaatcctg ctgcatgtct catatcatgt
      481 aagaattcat gaatccaaag atcattatat gcttgttctc cttgaacaag actaaagagc
      541 tgaccttgat catatcctac aataaaaaaa ccaaatacta atacgaatat caataatcct
      601 atagcagctt taggaatttt agtctctgag atctgtatct gttttcgaaa agacattatt
      661 attgaatttt aataaattac taatatataa agggttgtat aaaatatcca acagatgtga
      721 taaaatacat ttacatacaa ccaagttgta tattatctta aagttactaa tgcatacata
      781 tgtgaaactg ttggaaaagg tcgttgagag atatacacca gctagacaac tttcatttaa
      841 tatagttcat atattcaaag ctttacaact tgcaaaaata aacggacaca taagcagaga
      901 cttacttcgc aaagagctat ccttaggtga tgggtctgtt aaaacattaa tcaaacatct
      961 taaaatgaca aatatgatta aaactagcaa tgcaggtaca attttaactg aaaaaggaga
     1021 aaaaattatc tcacaaatat tgtcttgtat tcctaatgaa actgatatac aaaagagttc
     1081 tataacaatc ggtaaattca attatgttgt attagtaaaa gatatggcag atgcaataaa
     1141 atctggaata gagcaaagag acatagctat taaagcagga gcaagaggag ctactacact
     1201 aatatttcat aatggcattt ttttaattcc tggaaccaat tttaatgcat taagtaaaga
     1261 accacagata caaaaaagac taattgaaag tttacatccg gaaaataatg atgtaattat
     1321 tataggaagc gataataaaa gtaggagaat tgcagagctt gctacaaaat atgctgcact
     1381 ttttactata attaatcacg ttaaacatta acatattaat ttcataatga cctaattata
     1441 gtaacaatga aatttcaata agcataatta ataaaaaatt ttttttctta taggcattag
     1501 atataaccta tacttcagaa ttagtttgag ataagatgaa taagttaaga aaaagaatta
     1561 tgaaaataag cttgtctctt attgtgaata tttgaaggaa caatagaaga gatctttttg
     1621 aagaattgaa ttagaacaaa tgataaatac gatattagaa acaattgatg atgaagcatc
     1681 tcagacaaga tttgtgaaaa aaatgaaaat agactattat gcatatatat caaaaattct
     1741 acagatgtat aataataaat ttaatataaa taattttact atattagata aaaaggtaaa
     1801 ttgtttcctt atagatataa aataagaaaa tagtgaatat aaccaaataa acataggatt
     1861 tcaaaataga aatatatcat ataggatctt aactacaaag ataaagaaga taggactcca
     1921 atactattat gtactaggaa ttattgatct actattaaat tttataataa tagtaattat
     1981 aatttgtagt aaatttaaaa aaataaattg tgttatcttt atttatattt ttttatagtt
     2041 atggttttgc ctcatagatt atattaaata gtgtctggat tgcacgtctg aatttggtaa
     2101 acccagctgc ttctgatatc tcttttattt tcttttcacc tgcttgtgca cctaatgcag
     2161 gaccattatc tgctaaagaa tttggaacac atactagggt agatgctgca taatatgttc
     2221 ttcctaccaa attaaggttc tcttctatct tgtcattggc cattggttct atgatcatac
     2281 aggtaccgtc tggtttaagc gattgctttg caaatttcat tgctcctata ggatcaccca
     2341 tatcatgaag acaatcgaaa aaagtaatta gatcataatc attgccgatt ggtttgtttg
     2401 ctgat
//
LOCUS       DATIAS010000144         4808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_571840, whole genome shotgun sequence.
ACCESSION   DATIAS010000144 DATIAS010000000
VERSION     DATIAS010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4808
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_571840"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VLA74_02810"
     CDS             <1..414
                     /locus_tag="VLA74_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49667.1"
                     /translation="FHHGKEEKAYFPSTQNKNSFSEDIRKFLIEHELGRRIAGMFKRE
                     LLNWRKCIIEGKQIDSKEPIARFLKSYAVFITDHLEKEDKFFDIIESKDVISIDEDKA
                     IRNHYELCKNKSGGQARIEELLRLLEYLEHRDWMK"
     gene            complement(792..935)
                     /locus_tag="VLA74_02815"
     CDS             complement(792..935)
                     /locus_tag="VLA74_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49668.1"
                     /translation="MYEVTCFPCGIRERFVEEDEAIIHAYNHERVLTHSTSSGYFVSV
                     NEV"
     gene            1390..2550
                     /locus_tag="VLA74_02820"
     CDS             1390..2550
                     /locus_tag="VLA74_02820"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF49669.1"
                     /translation="MSLANNNVHVLVAGGGYAGIQTALGLEQLLKKKNDPTIQLVDKN
                     IYHTLLPSLPEIISKRGFSIIYYKDIIRGKKIDFIQTNIVDIDLDKKLVYTVNPSYRL
                     EYDFLVLSLGSRPFLPNIPGLREYSFQFNSVENAKRIAEKLSSKDMIDPVENTNIIIG
                     GGGATGVEIAGEIASLIKKRNRLASNIKVILISPDLLVGFPARTKNWVRAYLEALDVD
                     LLLGDEYYITEVKPDLVCLKNGRAIKTTMLIWAGGVTALPLPQQIGLKTGYNGRVVVN
                     KFLQAEGRKNVFVLGDAALIINNKGFPVPTTAYFAEQHGKIAAQNIYSMIKEQGRTMK
                     EYNIKNLWLDDFAISIGSDLAVSRIRGLDLYGYSASKVKKLIKMKYLKDIKK"
     gene            2891..3310
                     /locus_tag="VLA74_02825"
     CDS             2891..3310
                     /locus_tag="VLA74_02825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSF49670.1"
                     /translation="MQILTRTIFLRSKGEGDIIDITPETSKILSQSKLKDGIVTIFVS
                     GSTAAVTTIEYEPGLRQDFPNMLSRIVPENIEYQHENMWHDGNGHSHVKASLIGPSLT
                     IPFNDGTLMLGTWQQIVVLEMDINKRERNVILQIMGE"
     gene            complement(3754..3891)
                     /locus_tag="VLA74_02830"
     CDS             complement(3754..3891)
                     /locus_tag="VLA74_02830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49671.1"
                     /translation="MPVIITRIAIIVTAGGRELKEFLSVLNHCWSIFDNLTVLDKLVL
                     L"
     gene            3920..4219
                     /locus_tag="VLA74_02835"
     CDS             3920..4219
                     /locus_tag="VLA74_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49672.1"
                     /translation="MGVAALVPELSIIFISIGGVLVAIGIGYLAVSYGLFKGKGWAWS
                     ITLILSYIGIVIAIISILSGNFVPIINLAINIAIVYFLYRPQVKAFFGKPPSAKI"
     gene            4409..4621
                     /locus_tag="VLA74_02840"
     CDS             4409..4621
                     /locus_tag="VLA74_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49673.1"
                     /translation="MVTPKILTRKCTECRDGMMEGELQAIPNEIPLSSYQKIVPFNYM
                     PEIMKKHHFYKIFICNNCGYLKIFFS"
BASE COUNT         1727 a          694 c          825 g         1562 t
ORIGIN      
        1 tttcatcatg gtaaggagga gaaagcgtat ttcccaagta ctcaaaataa gaatagcttt
       61 tcagaagata ttagaaagtt tttgatagaa catgaacttg gaagaagaat agcaggaatg
      121 ttcaagagag agttgttaaa ttggaggaaa tgtatcattg aagggaaaca gattgactca
      181 aaagaaccta tagctaggtt tcttaaatca tatgctgttt ttattacaga ccatctagaa
      241 aaggaagaca aattctttga tatcatagaa agtaaagatg ttatatcaat tgatgaagat
      301 aaagcgataa ggaatcatta tgagttatgc aaaaataaaa gtggtggaca ggcaagaata
      361 gaagaacttt taaggctact tgagtatctt gaacacagag attggatgaa ataagagtat
      421 gtgaatgata atatgttaaa taaatcttat tatagtataa atagttgatt atatttgtct
      481 aatattagat cataagctca gatagttctt ataaataata atcaatatac atttagttat
      541 cacaagataa aggttaatgg aaatggaaat ggttgattaa ggactaaatg ataaagatta
      601 ttatcagtaa ttgtttcttg tatagatctc gtatgactag atctagaact tgttttaagc
      661 ataacatatg attatgaata aaaattgaaa tgactgtaaa atgaaggttt cataggaata
      721 caagcgaaat ttagtatagg atggaaaata ttaaaattaa aaagaaaaaa tgacgaagag
      781 gtgtctaatt attagacctc gtttacacta acaaaatacc cacttgaagt actatgtgtt
      841 aatactctct cgtgattata tgcatgtatg attgcctcat cttcctcgac aaaacgttct
      901 cgaatcccac aagggaaaca agtaacttca tacatatgtg cttctaaaat tcacctttca
      961 atgtacttta tgaattcgat gtatttaagt tctatgtaac acagtttgaa tgcgtttctt
     1021 atagaaaata tatatgcata aaatagcaga atttatgaag atgtacaaag aaccaataga
     1081 aatcgacctg caattctaga aatagtggcg cttttgtatc attattgaac tattatcata
     1141 atttttaatt tgggtattaa tacttgttga agtcagaaat tggaaatgac tttacgaaat
     1201 tgtgaaaata aggtatttgg caatagcagg cctaaagtga agtaatgtta ataaattatg
     1261 aatactctta tcactaaatt tagaaaccta aactttattt gaaattataa tgcaatttgt
     1321 gtacccgaat ttcaatatca ataatatcat ttacataaga gaaaatatat tatttgacat
     1381 cattaattaa tgtcgttagc aaataacaat gtacatgttt tagttgctgg tggtggatat
     1441 gctggtattc aaactgctct ggggttggaa caactactta aaaaaaagaa tgatccaacg
     1501 attcagttag ttgataaaaa catatatcat acgttactac caagtctgcc agaaatcata
     1561 tctaaacgtg gattctcaat tatttattat aaagatatta tccggggtaa gaaaattgat
     1621 tttattcaaa ctaatatcgt tgatatagat ctagataaaa aattggttta tactgttaat
     1681 ccttcatatc ggctagaata cgatttctta gttctatcat tgggtagcag accattcttg
     1741 cctaatatcc ctggacttag agaatattcg tttcaattca atagtgtaga aaatgcaaaa
     1801 aggattgccg aaaaactgtc atcaaaagat atgattgatc cagtagaaaa tacaaacata
     1861 atcatcggag gcgggggagc gactggagtt gaaattgctg gtgaaattgc atctttaatt
     1921 aaaaagagga atcgactagc tagtaacatt aaagttatac taatatcacc agacttatta
     1981 gttggttttc ctgctcgtac caaaaattgg gtacgagcat atcttgaggc cttagatgtc
     2041 gatttattac taggcgacga gtactatatc acggaagtca aaccagatct ggtatgccta
     2101 aagaatggta gggctataaa aactacaatg ctaatttggg caggaggcgt cactgctcta
     2161 cctcttcctc aacaaattgg actcaaaaca ggttacaacg gaagagtagt agtcaataaa
     2221 tttctgcaag cagagggacg aaagaatgtc ttcgtattag gtgatgctgc gcttataatt
     2281 aacaataaag gatttccagt accaacaaca gcatattttg cagaacaaca tggaaaaatt
     2341 gctgcacaaa atatttattc tatgataaaa gaacaagggc gtaccatgaa agagtacaat
     2401 attaaaaacc tttggctaga tgatttcgca atttcaatag gatccgattt agcagtttca
     2461 aggataagag gactagatct atatgggtat tctgcaagta aagtaaagaa attgattaaa
     2521 atgaaatatc taaaagatat taaaaagtaa ggatactaga ctcctaacta gatcaaatta
     2581 agatgaaagc atgaaaacct ctcttaactt tccactttct gtctgaatta atctgttaat
     2641 ccgattaatt cgtaatttct aataatataa tcccaatact tatagttaat ttattataga
     2701 tgcagataat tgtgatgttt atgatgttga atagctatct aaaattttag ttcgaactag
     2761 aatccataat tgaaatctaa tttaccgatt caattcaaaa tgtttcattt ttattttaat
     2821 acatatactg aaattacctc tataatctga tgataaagat tattactgaa attatgtatg
     2881 aaatagatag atgcaaatat taactagaac tattttttta agatccaaag gtgaaggaga
     2941 tataattgat atcactccag aaacttctaa gatacttagt cagtcaaaac ttaaagatgg
     3001 catcgttact atttttgtat cgggttcaac tgctgctgta acaacaatag aatatgaacc
     3061 aggattaaga caagattttc ctaatatgct gtctagaata gtgcctgaaa acattgaata
     3121 tcagcatgaa aatatgtggc atgacggtaa tggacactct catgtaaaag catctttgat
     3181 tggtccaagt ctgactattc cattcaatga cggtacttta atgttaggaa cttggcaaca
     3241 gatagtcgtt ttggagatgg atattaacaa aagagaacga aatgtgatac ttcagataat
     3301 gggggaataa tgtcttttca aaaaaactat caggataaaa tagtatatct atcaacttta
     3361 aaatcatgat ggctaatgta ccgattacag taattaaagc tctttctaaa tgttgttcga
     3421 aataactcgt ctttataaca tctaatagtc taattttggg ggttgtagtc tggttttctt
     3481 aatcaagtaa ttaggaattg atttaggaaa gtagacagtc tggcgcctgc cagtaatata
     3541 atcaatgaat gaaacaatat ttttatgctg ttatataaat tgctagtatg atgtttgata
     3601 caatacttgc gagatgagta cattccgcac ataatacaca cccctatagg tttgccgcac
     3661 aatgtgtaaa catccctgta aatagattga tgcagtgttt caccgtgaaa ctcacttcta
     3721 ttcagatgca atatatgtta acttatttta ctactacaat aaaactaatt tatctaacac
     3781 ggttaaatta tcaaatattg accaacaatg atttaatacg gaaagaaatt cttttagctc
     3841 tcgacctcct gctgttacaa taatagcaat tctggttatt atcactggca tagttgctat
     3901 cgctggcgga cttgttcttt tgggcgttgc ggcgcttgtt cctgaattaa gtataatatt
     3961 tatttcgata ggtggtgttc tagtagcaat agggatcgga tatctggctg ttagttatgg
     4021 cttgtttaaa ggtaaaggat gggcctggtc aattacatta attctatctt atataggaat
     4081 tgtaattgct attatctcaa ttttgagcgg aaacttcgta ccaataataa acctggcaat
     4141 caatatagca attgtgtact ttttgtatag acctcaagtt aaagcatttt tcggaaaacc
     4201 gcctagcgca aaaatctagt cttatcatgt aagccaattt tccgactcac taccttattt
     4261 atacaagtcc aatctgattg gaactagaat aaataattaa tttatttatg tgtcattttc
     4321 agcggctagg taggattgat tttgggtcag ggttataatg ggtcattgac taaacaagat
     4381 aaattattgt tcttcgtaag caaaattcat ggttacccct aagatattga ctagaaaatg
     4441 tacagagtgc cgtgatggaa tgatggaggg cgaacttcaa gccataccaa atgaaatacc
     4501 attatcgtca taccaaaaaa tagttccgtt taactatatg ccagaaatca tgaagaaaca
     4561 tcatttctac aaaatattta tttgtaacaa ctgcggttat ctgaagatat tttttagcta
     4621 acttcttcaa tctgtcatct atcaatatag tatggcttca ccttttaact aatattaggt
     4681 taaacaattc taattctctt gtttagccaa tcacttgatt gaaatctcaa cacagtatca
     4741 tattcattta tggaacccta acaattaatg cgatatcatt ttagaatcat agttatgcac
     4801 tctccctc
//
LOCUS       DATIAS010000145         3049 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_436025, whole genome shotgun sequence.
ACCESSION   DATIAS010000145 DATIAS010000000
VERSION     DATIAS010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3049
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436025"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VLA74_02845"
     CDS             <1..397
                     /locus_tag="VLA74_02845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49674.1"
                     /translation="LFALAVDRPLYFSVHSAIAKLAPEGGALIHVSKYLGTSIEPKPR
                     EDQQELEEFLDLLQPGWREVLVKKRPLPNMVVSNAAVTAAAGGLAGRPDVRIADNLYI
                     VGDWVGKEGLLSTTSFASARRAAQLILNE"
     gene            983..1132
                     /locus_tag="VLA74_02850"
     CDS             983..1132
                     /locus_tag="VLA74_02850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49675.1"
                     /translation="MYSRTTDDYDAMSKSGIEVIVQPSFWLGSPRTSFGTFEDYWELL
                     FFMIL"
     gene            1205..1354
                     /locus_tag="VLA74_02855"
     CDS             1205..1354
                     /locus_tag="VLA74_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49676.1"
                     /translation="MFKPKHLTLGVIFAIEAYEGAIPKMERQVELTRRRVRIFSFMVS
                     RCSIL"
     gene            1609..1995
                     /locus_tag="VLA74_02860"
     CDS             1609..1995
                     /locus_tag="VLA74_02860"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSF49677.1"
                     /translation="MVVETITAKQWQEKVTNSVLPVVVNFSAVRCGFCQALEPLYNKL
                     SEQYNDKLVFLKLMVDDENNQELLDRILIEGTPTLKFYCKNREIGEHIGYAIEPKLKQ
                     KIEMFLSEMEFCLKNSTTLTKNLSQP"
     gene            2123..2383
                     /locus_tag="VLA74_02865"
     CDS             2123..2383
                     /locus_tag="VLA74_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49678.1"
                     /translation="MNPNSKFSKQTIEKIYGNNKVKEVAIIIYHPVDVNKFKMINNGN
                     KKNIYNDPSEKDHNSLVISRISPDKKIENAIEIGESKGKRKY"
     gene            2551..2721
                     /locus_tag="VLA74_02870"
     CDS             2551..2721
                     /locus_tag="VLA74_02870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49679.1"
                     /translation="MISIVEAISAGLSPITSNIGDTEFVPSNYQDQSLDRATEIIANI
                     IKNKRSKNDLDN"
BASE COUNT         1168 a          401 c          472 g         1008 t
ORIGIN      
        1 cttgtttgct ctggcagttg accgtccact atatttttca gttcattctg caattgcaaa
       61 gcttgctcct gagggtgggg cactaattca tgtctcaaaa tatcttggta cttcaattga
      121 acctaaacca agagaggatc aacaggagtt agaagagttt cttgatttac tgcagccggg
      181 atggagagag gtgcttgtta agaagaggcc attgcccaat atggtagtgt ctaatgctgc
      241 tgttactgct gcagcaggtg gattagctgg aagacctgat gtacggattg cagacaattt
      301 gtacatagta ggagactggg tagggaagga aggattatta tctactacat cttttgcaag
      361 tgcaaggcga gctgctcagc taattttgaa tgaatgaact aaagcattaa ttagattaac
      421 atgaaactaa tgaattaaaa taaaaataca ttattatggt tggtatcata tttatgggcc
      481 aaaaatattg cgtcaaaaac aattcataca cctctggccc catatagtat aaggggtcag
      541 ttgaattatt aaggtttttt attaatccag ataataattg atattctcct caaaatatga
      601 ttgttataat actagaataa tacattagct catttatctt aacagataat attttaactg
      661 aaagaatacg agaactagaa gaaacaatcg aaataataca taataacact tcaaaaaaaa
      721 gaatccttgg gatttgaaca cttctataaa gtggggctat ttacttttta aatcattatt
      781 attttatatt atgtaaaaca acaatagaat agaacaattg atgtaaatat atgctaaaaa
      841 atttgaaatg ataatttact attgttttta tcctaatatt aaataatctt aatatgttta
      901 tagttgaata attaaatcta tcaatagaaa aaggatgatg acttaattat tgagtaggct
      961 attatttgat ccacatattc atatgtattc tcgaactact gatgattatg atgcaatgtc
     1021 taaatcaggg atagaagtta tagtccaacc ttcattttgg cttggaagcc caagaacatc
     1081 ttttggtacg tttgaagatt actgggaatt attattcttt atgatactat aaagaataac
     1141 taattattat gcctttgctt tattttttgt tagaagtgtc tgttttcaat aaatcctatt
     1201 atagatgttt aaaccaaaac atttgacact aggagtaata tttgcaattg aagcttatga
     1261 aggagcaatt cctaaaatgg aaagacaagt agagttgact cgcagaagag ttagaatttt
     1321 cagctttatg gtttcacgat gttccattct atgattctgc atttaccaag ttttcattaa
     1381 ataccctctg atcataaata aattttagat atattgattc atgcctagag attatctaat
     1441 atagtataga aagtaaaaat ttaatctatt ctatatggtt atacaaaaga tctaatataa
     1501 tacaaaatat gctaaaagta gatcgtagta cattcatctt tatagttata gatgattatt
     1561 atatctgtta tagaaaaata aaaaagtctg ctatctgtta taacttctat ggtagtagaa
     1621 accataacag caaaacaatg gcaagaaaaa gtgacaaatt ctgttcttcc tgtagtagtt
     1681 aattttagtg cagttcgttg tggtttttgt caagctttag aaccattata taataaatta
     1741 tccgaacaat ataatgacaa gttagtattt ctaaaactta tggtagatga tgaaaataat
     1801 caggaattat tagatcgtat attgattgaa ggtacaccta ctttaaagtt ttattgtaaa
     1861 aatagagaaa taggtgaaca tattggatat gcaatagaac caaaattaaa acaaaagata
     1921 gaaatgtttt tatcagaaat ggaattctgc cttaagaata gtactacatt gactaagaac
     1981 ttatcccaac catagataag aatattcttt tttttatcat ctttattcat attataatcg
     2041 aacaatggag atttatatta gaacaatcac atacacatcc ttaaataaat tactttatca
     2101 agatagaatt ttttaaaaga tattgaatcc taattcaaaa tttagcaaac agaccataga
     2161 aaaaatttat ggaaataata aggtaaagga ggtagcaatc ataatttatc atccagtaga
     2221 tgtaaacaaa tttaagatga tcaataatgg taacaagaaa aatatctata atgatccatc
     2281 agaaaaagat cacaactctt tagtcatttc aaggataagt cctgataaga aaattgaaaa
     2341 tgcaatagaa ataggagagt ctaaaggaaa aagaaaatat tgattaccat tatatgacta
     2401 ttataggaaa tattatctta gatgataagg attatcttga aaagcttaat aatttgatat
     2461 ttaaatatga tctaaaatcg agtctgatgt tccttttgat gaacttgtac aaaaatcaag
     2521 tatattcatc ctacctcaaa gcaacctttt gtgatatcaa tagttgaagc aataagtgca
     2581 ggacttagtc ctataacatc taatatagga gacacagaat ttgttccttc aaattaccaa
     2641 gaccaatcac tagatcgtgc aacagaaatt attgccaata taataaaaaa taagagaagt
     2701 aaaaatgatc ttgataatta aagaatacat taagtgattc aacaattaag ttattaaagg
     2761 aaagatataa agaaaaattt agaggaaatt tttttgaatc tgctgaagat ggccaaaaac
     2821 aatacaaaga gtatatggac ctctttaaca aatatacaaa ttctgacgaa cttccttaga
     2881 tttaaaacaa aaaataacaa ctacaaaata atgaaataat attttctcta cctttgtgag
     2941 tgtggttcta ctaacaccta taaagccagc aatattatct aatgatatat cttgtattaa
     3001 attgaccgag gatttacctg ctaattgtct ttcctgtgag ttcttttaa
//
LOCUS       DATIAS010000146         3135 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1252972, whole genome shotgun sequence.
ACCESSION   DATIAS010000146 DATIAS010000000
VERSION     DATIAS010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252972"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2659)
                     /locus_tag="VLA74_02875"
     CDS             complement(<1..2659)
                     /locus_tag="VLA74_02875"
                     /inference="COORDINATES: protein motif:HMM:NF017000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lanthionine synthetase LanC family protein"
                     /protein_id="HSF49680.1"
                     /translation="MVIVGKYLHIFNKPNTKSLKYDIMLSITVNTIEQDPLIDILSKE
                     IIQKFDGEWNIESYKDNGFKWTMFKNLKKNIPVQGFKIHISASTRSAIDIIKKSIPIL
                     YNEKITFKIPSNLKELSNLNNGVGGNHQIGKFLTVYPYDNDQLVKVALDLDHATFGLE
                     GPSIYLERSIRRGSLVHYRYGSFQKKTIHLTTGEIVPILYGPNNDPIIDDRTNPNKPF
                     EWVNDPFIRYGIEPYVKQYQTLLHNRYIRSELLNNSPRFFTWLGLDTHDADFSLCIIK
                     EAQRGLAIDYLGDDSQKRLKKEANILRNIQKFKFVPRFIDYWEDRDHSYLVYEYIEGT
                     SMSSLIRKMVSTGIHIDELYIIRWTHELCNILEALHNNCLVFRDLKPSNLIIDKNGYI
                     HLIDYELVEFYNNDNYAKSAGTMGYRSPQHAKGLAPTFQDDIYSLGATLLSIINMKDI
                     AEMIEQFNMKDYVEIFGQHISYDLREIIKKCLENNLNKRFTTVNQIRLELTNNNFNRI
                     NSTLKGNKKKNRDYLDIAENIGDMICKTAITQGNMVYWISNHPICMREPTRDIYTGSS
                     GIGLFLCNLYNVTKNDKYLSYAEKTALWLNEKTSRIKNNNDFLPGLYFGESGVGLFFL
                     ALYDITSNSKYLDLAIEKSNQVCSIAHKSPDITNGASGTGLYNLILYDITMNDIFKQR
                     ASNLGHFLLKNLKIGFTPYWNFPDELGFEKIKDSSFLGFAHGLAGIGYFMAELFDVTK
                     EKQYLNKTIEIAGLLSEKASKTLIDKSGLNWPKDFDDSTFSTFWCHGATGIGLFFLKA
                     FEITKNKDYLDIALRAGKTVSIVSKSLGTTQCHGLAGNIEFLLDLYQTTEKKDILGSA
                     QELGNLLETYNTNNEDYNGWISDLPTIMTN"
     gene            2758..>3135
                     /locus_tag="VLA74_02880"
     CDS             2758..>3135
                     /locus_tag="VLA74_02880"
                     /inference="COORDINATES: protein motif:HMM:NF024668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4062 domain-containing protein"
                     /protein_id="HSF49681.1"
                     /translation="MSSKEGYRIFLSSTMKDLTDTRNKIEDIITKTENIPIMAENFIG
                     PNTVKKLLEEKIKSCHAYIGIFHEKWGYVASDNNPNGLSVPAIEYETSKIINIPRVIF
                     VSKLKEEKPLQDFIDNISSYETGD"
BASE COUNT         1053 a          500 c          419 g         1163 t
ORIGIN      
        1 cattagtcat aattgttggc aggtctgaaa tccatccatt ataatcttca ttgtttgtat
       61 tataagtctc taacagattg ccaagctctt gtgccgaacc aagaatatct ttcttctctg
      121 tagtttgata tagatctaac aaaaactcaa tatttccagc taaaccgtga cattgtgttg
      181 tacctagtga tttgctcaca attgatactg tttttccagc acgtagtgct atatctagat
      241 agtctttatt ttttgttatt tcaaatgcct ttaagaaaaa aagtcctata cctgtagcac
      301 catgacacca aaaagttgaa aatgtggaat catcgaaatc ttttggccaa tttaggccac
      361 ttttatcaat aagtgtttta gaagcttttt cagataataa accagcaatt tcaattgttt
      421 tattaagata ttgtttctct ttagtcacat caaatagctc tgccatgaaa taacctatac
      481 ctgccaatcc atgggcgaat cccaaaaatg aactatcttt tattttttca aatcctaatt
      541 catcaggaaa attccaatat ggtgtgaagc ctattttcaa attttttaat aagaagtgtc
      601 ctaaattcga tgccctttgc ttaaagatat cattcatagt tatatcgtaa aggattaaat
      661 tgtataaacc ggtgccggaa gcaccattag taatatcagg cgatttatgg gcaattgaac
      721 agacttgatt acttttttct attgcaagat ctaagtactt tgaatttgag gtaatatcat
      781 atagagctaa gaaaaataat cctactcctg actctccaaa gtacaatcca ggcaaaaagt
      841 cattattatt tttgattctt gatgtttttt catttaacca aagagcagtt ttttctgcat
      901 aggataaata tttgtcattt tttgtaacat tgtataaatt acagagaaat aatcctatac
      961 cactactgcc ggtatagata tcccttgttg gttccctcat acatatagga tgatttgaaa
     1021 tccaatatac catatttcct tgggttatag ctgttttaca aatcatatct cctatatttt
     1081 ctgcaatatc taaataatct ctatttttct ttttattgcc ttttaaggta ctattgattc
     1141 tattaaaatt attattagtt aattctagac gtatttgatt aacagtagta aatcttttat
     1201 ttagattatt ttctaaacat tttttgatta tttccctcag atcatatgaa atatgttgcc
     1261 caaaaatttc cacataatct ttcatattaa attgttcaat catttctgca atatctttca
     1321 tatttataat acttaataat gtagctccca aagaatatat atcatcttgg aaggtaggag
     1381 ccaatccttt tgcatgctga ggggaacgat aacccatagt accagcactt ttcgcataat
     1441 tatcattatt ataaaattca accaattcat aatctataag atggatataa ccatttttgt
     1501 ctataatcaa attagaaggt ttaagatcac gaaatactag acaattatta tgtaaggctt
     1561 caagaatatt acataattca tgagtccatc ttataatata taattcatct atatgtatac
     1621 ctgtagaaac catctttctt ataagcgaag acattgaagt accttcaata tattcataaa
     1681 ctaaatatga atgatcccta tcttcccaat aatcaataaa tcttggaaca aatttaaatt
     1741 tctgaatatt cctcaaaata tttgcctcct ttttaagtct cttttgtgaa tcatctccta
     1801 agtaatcaat tgctaatcca cgttgtgctt cctttattat acaaagagaa aaatcagcat
     1861 catgtgtatc caatccaagc caagtaaaga atcttgggct attattaaga agttctgatc
     1921 ttatatacct attatgtaat aaagtttgat attgtttaac atatggttca attccatatc
     1981 tgataaaagg atcgtttacc cattcaaatg gcttattagg attcgttcta tcatctatga
     2041 tcggatcgtt atttgggcca tataatatag gaactatttc tccagtggta agatgtatag
     2101 tttttttttg aaaggaccca taacggtaat ggactaaact tccacgacgg atggatcttt
     2161 ctaaatatat tgaagggcct tcaagtccaa aggtagcatg atctaaatcc aaagctactt
     2221 taacaagctg atcattatca tatggataaa ctgtaagaaa ttttcctatt tgatggttcc
     2281 ctcctactcc attatttaga ttagataatt ccttcaaatt agaaggtatt ttaaaagtaa
     2341 tcttttcatt atataaaatt ggtattgatt tttttataat atctatagct gaccttgtac
     2401 tagcagagat atgtatttta aaaccttgaa ctggaatatt tttttttaga tttttaaaca
     2461 ttgtccattt aaagccatta tctttatagg attctatgtt ccattcacca tcaaattttt
     2521 gtataatttc tttgctaagg atatctatta atggatcctg ttcaatagtg ttcactgtaa
     2581 tagataacat tatgtcatat tttagacttt ttgtatttgg tttattgaat atatgtaagt
     2641 atttccctac tatgaccatc taatataact aaacattttt ctagatgtat atcaattgtc
     2701 taaatcaatt ccatgcttat attcattaat aagataagta tttctatata atcataattg
     2761 tcatcaaaag aaggctatag gatattttta agttctacaa tgaaagattt aactgacact
     2821 cgaaacaaga ttgaagatat tattactaag actgaaaata ttcccattat ggcagagaat
     2881 ttcattggac ctaacacagt taaaaaattg cttgaagaaa aaataaaatc ttgtcatgcg
     2941 tatatcggta tttttcatga aaaatgggga tatgttgcta gtgataacaa tcccaatggc
     3001 ttatcggttc cagcaattga atatgaaact agtaaaatta tcaatatacc aagagtaatt
     3061 tttgtttcta aattaaagga agaaaaacct ctccaagatt ttattgataa catttcaagt
     3121 tatgaaacag gagat
//
LOCUS       DATIAS010000147         2290 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_708401, whole genome shotgun sequence.
ACCESSION   DATIAS010000147 DATIAS010000000
VERSION     DATIAS010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708401"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VLA74_02885"
     CDS             <1..376
                     /locus_tag="VLA74_02885"
                     /inference="COORDINATES: protein motif:HMM:NF014091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF126 domain-containing protein"
                     /protein_id="HSF49682.1"
                     /translation="KANGKAVLTNQPLNMLSMIDAKSGEIKDENHELFKRTLKNKILI
                     FPHAIGSSVGAYVFYSLKTNKVNPLAIICLNKCDTITASGCAISDIPLVDNLDQQIGP
                     LMEEKTEIFLDADNQKITIKKV"
     gene            complement(562..1398)
                     /locus_tag="VLA74_02890"
     CDS             complement(562..1398)
                     /locus_tag="VLA74_02890"
                     /inference="COORDINATES: protein motif:HMM:NF013514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HSF49683.1"
                     /translation="MIISTHLGINELNKLKELIITKKLKETNTTNSYELLRIKHDSIN
                     LICYKSGKTIYENNPQTVEIIRNILVTDSDYDYELGSDEAGKGESFGPLVTVCVALRP
                     EQITELRIIGVKDSKQLSPREIVRISEEIKKRRIVFRKIILQPEVYNSKIKELKKENK
                     NLNELLAWTHAKVIQNTLDTLNYDSAKVVIDKFDVEKTYKRLSKLDKNKIKIIQKSKG
                     ESEIPVAVASILAKSFFEEEVSVMCRRYGIDFRKINPSEIPKAIIDKVYKTHFKNISK
                     LL"
     gene            complement(1427..1549)
                     /locus_tag="VLA74_02895"
     CDS             complement(1427..1549)
                     /locus_tag="VLA74_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49684.1"
                     /translation="MERMKSIPNRWTGPQVKKENKTEVKSPVIVTNPAIQKRFI"
     gene            complement(1969..2172)
                     /locus_tag="VLA74_02900"
     CDS             complement(1969..2172)
                     /locus_tag="VLA74_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49685.1"
                     /translation="MGGELNKLASNIGIGRDFAGIHWRSDAIEGMKLGEELAIRFLIE
                     QKEIFYEKFDFSITKFDGTSVTI"
BASE COUNT          748 a          391 c          337 g          814 t
ORIGIN      
        1 caaagctaat ggtaaagcag tactgaccaa tcaaccactg aatatgcttt caatgattga
       61 tgccaaatcg ggtgagatta aagacgaaaa ccacgaattg tttaaaagaa ccctaaaaaa
      121 caaaatacta attttcccac acgctatagg aagcagtgtt ggtgcatatg ttttctattc
      181 cttaaaaaca aataaagtca atcctttggc catcatatgt cttaacaaat gcgatactat
      241 cacagcatca ggatgtgcta tctctgacat tcccttggtt gacaatctcg atcagcaaat
      301 aggaccgctg atggaagaaa aaaccgagat ctttttagat gcagataatc agaagataac
      361 tatcaaaaaa gtttaattta gaaaattatt atctataaat aacaggtacg tggcattcga
      421 tgggcgaact gactattgaa ataaatagaa tgaagaccaa agtccacgta ccatgtatat
      481 ataaaaaatc aaggattaaa caatattttc acgtaaatta gaaactaaaa aaaggagaag
      541 tagaacttga atttattttt cttacaataa cttcgaaatg ttcttaaaat gagttttata
      601 aaccttgtca attattgctt tgggtatttc actgggatta atttttctaa aatcaatgcc
      661 atatctccta cacattacgc taacttcttc ttcaaaaaaa cttttggcta aaatactggc
      721 aacagcaaca ggtatttctg attcaccttt tgatttttgt ataattttta ttttattttt
      781 gtctagtttt gatagtcttt tataggtctt ttccacgtca aatttatcaa taactacctt
      841 agcagaatca taatttaatg tgtcaagtgt attttgaatt accttagcat gagtccaagc
      901 cagcagttcg tttagattct tattttcttt ttttaactct ttaattttgc tattatatac
      961 ctctggttga agtattattt ttctaaaaac aattctcctt ttttttattt cttcagagat
     1021 tctaacaatt tctcttggtg aaagttgttt gctgtccttc actcctatta ttcttaattc
     1081 agttatttgt tctggtctta aagcaacaca aactgttact agtggtccaa aagattctcc
     1141 ctttcctgcc tcgtctgacc ccaattcata gtcatagtct gaatctgtaa ccaatatatt
     1201 ccgtattatc tccacggttt gtggattatt ctcgtatatt gttttgccag atttatagca
     1261 aattaaattg atactgtcgt gcttaatacg taatagttca taactattag tagtattggt
     1321 ttcctttaat tttttggtaa ttattaattc ttttaattta tttaactcat ttattcccaa
     1381 atgagttgaa ataatcataa tatattattg gtactataat aaattattat ataaaacgtt
     1441 tctgaatagc agggttggta acgattacag gagatttgac ctctgttttg ttttcctttt
     1501 ttacttgagg accggtccac ctgttcggga tggatttcat tctttccata gacaggattg
     1561 tgaaataagt taggaatttt ttctatattt ctcgtaggtg gatcctttgt atttttttcg
     1621 atcaatctac gaaaataaag gtttaatatt ttattttctt caaaaaataa atggctcatc
     1681 cattgtattc tgataaatat aagggttgtt atgccttata cagtccagat ataaccttga
     1741 tcttttgttc gatattttat gcaaattata agattaggtt tctcaataca attgactgaa
     1801 aaaaaatcga caagtggcat tcactttaat ttgtgtttaa atttaagtca aatcaaaaac
     1861 aaccgtgaat atgtaaaaat gggataaagg tactagagtc gttagaacat tataaaacaa
     1921 taatataatt atcaacgtat acaaagcata cggtaaaaag gaaaaaaatt atatggtaac
     1981 agacgttcca tcaaactttg taattgaaaa atcaaatttt tcataaaaaa tctccttctg
     2041 ttcaatgagg aaacgaatag ctagttcttc ccctaacttc ataccctcaa tggcatcgga
     2101 cctccaatga ataccggcaa aatcacgtcc tattccaata tttgatgcca atttatttaa
     2161 ttcccctccc acggtcagca catccggccc tttgtatgga aggaggtcca aaccatcatg
     2221 ggttggtaca accgggtctt ctatgatagc ctcctcgtca aaaaatgcct ttactacagt
     2281 tgcgcatgca
//
LOCUS       DATIAS010000148         7503 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1798965, whole genome shotgun sequence.
ACCESSION   DATIAS010000148 DATIAS010000000
VERSION     DATIAS010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7503
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798965"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VLA74_02905"
     CDS             complement(<1..300)
                     /locus_tag="VLA74_02905"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSF49686.1"
                     /translation="MSYEIKEESTPRHKRTRSLENVLIMQGGGSLGSFSCGVFKALVK
                     QKIRIDIVAGTSIGAVNAAIIAGSKSDQPEKDLEDFWLEVSESNIQIIPDLWMYEW"
     gene            593..1003
                     /locus_tag="VLA74_02910"
     CDS             593..1003
                     /locus_tag="VLA74_02910"
                     /inference="COORDINATES: protein motif:HMM:NF018893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 family protein"
                     /protein_id="HSF49687.1"
                     /translation="MEKIEENIKYSRYIVSLTYRFPKKNRNVLIDLSKKYVDMLKQYG
                     ILQHDVFQLVKPDDDKQYFTHLDKVVSANLEDEEVWIEIMHYKDKNHWLEIRAKMEKD
                     INCQQGWQEFANLLTPGSTVICDEFGRLNEIGFE"
     gene            1007..1411
                     /locus_tag="VLA74_02915"
     CDS             1007..1411
                     /locus_tag="VLA74_02915"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF49688.1"
                     /translation="MTTKLFANLPVKDLDKTIKFFTHLGFTFNPQFTDENATCMIIGK
                     DSFVMLLVEKFFKTFTNKEICDATTDTEVILALSAESREQVDNMITKVIEAGGREYMK
                     SQDYGWMYQRGFEDINGHIWEIVYMDESSIPK"
     gene            1662..2819
                     /locus_tag="VLA74_02920"
     CDS             1662..2819
                     /locus_tag="VLA74_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49689.1"
                     /translation="MPLKLSTTIGKIQNIPNSKNIEIINEFLEYMRNNGSSEHHQNNN
                     LKVVIAFGNFIGKDNSFSNINKKEQILGFLNTKVKSYDVDPDKRWITTWNNYLNRLRL
                     FYRWLYNHEKDTDHENWQTPEFIKIKNKKSKRVSPYLESEIWEKDELLSIIKYESHKR
                     NKAVLTLFWDLNGRNHEITILKLKHIRFREKYAEGEVPHEAKTGSGPILLTTSFPYVR
                     DWINEHPFRNTPDAYIICNIMTGAPVKPDAMWTMMNQLRNRILKMLEEGSIKDIKEKE
                     KVEYLIKTKKWNPYCLRHSSISSDSDFLPEYALKKKVRWSMNSKQGIRYIKRRIGDDL
                     KKQILIRNGIISENEIKKKPSIHLCGKCGFVNSFEHKLCSRGSGSDLFKDV"
     gene            complement(3286..3444)
                     /locus_tag="VLA74_02925"
     CDS             complement(3286..3444)
                     /locus_tag="VLA74_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49690.1"
                     /translation="MLEDLTGDQDKERLYIILSNALRSTSTITLEQTTTILDCLLKLG
                     LVIEPIRS"
     gene            3556..3918
                     /locus_tag="VLA74_02930"
                     /pseudo
     CDS             3556..3918
                     /locus_tag="VLA74_02930"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
     gene            4242..4799
                     /locus_tag="VLA74_02935"
     CDS             4242..4799
                     /locus_tag="VLA74_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49691.1"
                     /translation="MPKLDHSSKYLILYSTFAGFISAWAISGLLVIVDIVSQTPIGTF
                     FAVIGTSLGFYDPAVSQYIGFALHIVTGTVAGNIFGQVALFWNKLFPSNLKRGITYGI
                     IAGVSLWVVLFLPLATFIIQPKLDAFAVSAPNQYLFGIADHFQGLYPLVVIGSLGFHI
                     IYGIIFGFIVWRMVELKNVVQTNKE"
     gene            5035..6405
                     /locus_tag="VLA74_02940"
     CDS             5035..6405
                     /locus_tag="VLA74_02940"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HSF49692.1"
                     /translation="MYNSKNTKQNLRILVTGATGFIGSRIVKRLLANGHYKVRCMTRN
                     PENIYELFNSTGDIVEVVKADTSNYLELVEALKEVDVAFYLIHSMEGSTKKWQEFSKR
                     DRIAAENFAKAASETNTKRIIYLSGLIDIKHKDLSEHMQSRKEVGDILRTSKAEVTIF
                     RAAVILGQGGGSFQMLQYLVERLPVMVCPKWVLTKSQPISVDDVVTYLIKSIELEDTA
                     NKDFDIGGPEILSYVDMMKRYSAILKKPLKIVIIPFLTPRLSSYWVDLITPVKASLAR
                     PLIDSLKHEAVVHDNEIQKLIPIKLMNFEESIKTAMKEQVRKAKIIKKQKTSDSLNRK
                     ILIFSLISLGIIGATYYFLDNKNDLFTPLWIILAIVWYFGILFALFFVKDGARLGSLV
                     AGIIGWITLFFWGFNNVYLIYDNSINLYYPNVLVAIRNVIGAIVAGLVIAASHNLFHK
                     IRVLGK"
     gene            6855..7031
                     /locus_tag="VLA74_02945"
     CDS             6855..7031
                     /locus_tag="VLA74_02945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49693.1"
                     /translation="MMIGKISFYNYFKPYDFCGEPFLKSNLIYVTTNNNDPENMIETL
                     RLRRIFNSNQLRPR"
     gene            7233..>7503
                     /locus_tag="VLA74_02950"
     CDS             7233..>7503
                     /locus_tag="VLA74_02950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49694.1"
                     /translation="MKYQNIIAYLVIPLALLSIPSLLEHVNAQTDSDNQTAAPQQQED
                     QNMTLTTQALMKVDIFELQDTLKKAKLAVVDGNLKEALTGVRDVES"
BASE COUNT         2853 a         1014 c         1163 g         2473 t
ORIGIN      
        1 ccactcatac atccataaat ctggaataat ctgtatatta ctttcactta cttcaagcca
       61 aaaatcctct agatcttttt ctggttgatc gcttttacta cctgcaatga tggcagcatt
      121 tacagcacct atagaagtac cagcaactat atctattctt attttttgtt ttactagtgc
      181 cttaaacaca ccgcaggaaa aagatcctaa agagccacct ccttgcataa taagaacatt
      241 ttctaaagat cttgttcttt tatgtcttgg tgtgctttct tcttttattt cataactcat
      301 ctatattata taatatcttt tttcgaagac taaaaatttt ctcatttgta ttgttaatta
      361 tattgttttt actatagatc ctaatataga aatgattggg accaaaaatc aggtcaaatt
      421 tgtttcacat ccaactgtga aagatacaaa aattatcgta tacaagtagt tgccacagga
      481 gatttgtttc taaaagctaa tgattgggga attttgtgat agagatcact tatttattga
      541 atgttaagaa gcgataaatt taaaaaaaat tctttctcat aagaaatgaa aaatggaaaa
      601 aatagaagaa aatatcaaat attctagata catagtatct cttacatatc gatttccaaa
      661 aaagaaccgt aatgtactaa tcgaccttag caaaaaatat gtcgacatgt taaagcaata
      721 tggtatctta caacatgatg tttttcagct tgttaaacca gatgatgaca aacaatactt
      781 tacccattta gataaagttg tttcggcaaa tcttgaagat gaagaggtat ggattgaaat
      841 aatgcactat aaggataaaa atcattggct tgaaataagg gctaaaatgg aaaaagatat
      901 caattgtcaa caaggatggc aggaatttgc taatctcctt acgccaggtt caactgttat
      961 ctgtgatgaa tttggtaggt taaatgaaat aggatttgaa tagctattga caacaaaact
     1021 ttttgcaaac ttgcctgtaa aagatcttga taaaacaatc aagtttttta ctcatcttgg
     1081 ttttacattt aatcctcaat ttactgatga aaatgctaca tgtatgatta ttggtaaaga
     1141 ttcgtttgta atgctcttag ttgaaaaatt ttttaaaact tttaccaata aagagatttg
     1201 tgatgctaca acagatactg aagtaatttt ggctttatct gcagaaagca gagagcaagt
     1261 tgataatatg ataacaaagg taattgaagc tggaggcaga gaatatatga aatcacaaga
     1321 ttatgggtgg atgtatcagc gtggttttga agacatcaat ggacacatct gggaaatagt
     1381 ttacatggat gaaagttcaa taccaaaata gaagttaata agaatccatc caattaattg
     1441 caaaattaat attaaaacag aaaaaaataa acataaatta agagaattaa ccttatcctc
     1501 aaatatatat tgtctacagc tgttactata agtttcatag taggaacaaa atttatgtca
     1561 aatttgtttc atatcccact ggccccattc tataagtggg ttcatatact ttgaatttga
     1621 tattagattt tgtaaaggaa aggaggaata aagaaggata aatgccattg aaactatcta
     1681 caacaatagg aaaaattcaa aatattccta attctaaaaa tatagagatt ataaatgaat
     1741 ttcttgaata tatgagaaat aatggttcct ctgaacatca tcaaaataac aatttaaaag
     1801 ttgtaatagc ttttggcaat tttataggta aagataactc cttttctaac atcaataaaa
     1861 aagaacaaat tttaggattt cttaatacta aagttaaaag ctatgatgta gatccagata
     1921 aaagatggat aactacatgg aacaattatc tcaatagact aagactattt tatagatggc
     1981 tatataatca tgagaaagat actgatcacg aaaattggca aactccagaa tttatcaaaa
     2041 taaagaacaa aaaaagtaaa agagtatctc cctatttaga aagtgaaatt tgggagaaag
     2101 atgaattatt atcaattata aaatatgaat cacataaaag gaacaaagct gttctgacat
     2161 tattttggga tttgaatgga agaaatcacg agattactat tcttaaatta aaacacatta
     2221 gattcagaga aaaatatgct gaaggcgaag tacctcatga agctaaaaca ggtagtggac
     2281 caatactgtt aacaactagt tttccttatg taagagattg gataaatgaa catcctttca
     2341 gaaatactcc agatgcttat ataatttgta atataatgac aggtgctcca gttaaaccag
     2401 acgcaatgtg gactatgatg aatcaattaa gaaatagaat cctcaaaatg ttagaagaag
     2461 gatctattaa agatatcaaa gaaaaagaaa aggttgaata tttaataaaa acaaagaagt
     2521 ggaatcctta ttgtctacga catagctcaa taagttcaga tagtgatttt cttccagaat
     2581 atgcattaaa gaaaaaagta agatggtcta tgaattcaaa acaaggaata agatatatca
     2641 aaagaagaat tggagatgat ctaaagaaac aaatacttat aagaaatgga ataatttcag
     2701 aaaatgaaat taaaaagaaa ccttcaattc atttatgtgg aaagtgtgga tttgtgaatt
     2761 catttgaaca taaattgtgt tctagggggt ccgggagtga tcttttcaaa gacgtttaga
     2821 gtattgaact gagcattatt tatggccgta ttcatatgat ttgccatttc cgaaagatat
     2881 gcttcgggtg ttatagtacg attaaaatat gatttaaaat gttatccaat tcctacacaa
     2941 tttccatttc gatcctataa tagtacgatt caaatcctcc cagcgacttc tcttttcatg
     3001 cctacctttc cgatatatta aggagaaact ggtcaacctt tagttgaatg tattattata
     3061 atacaactat tatataaaat gacatctatt ttattcgata tagatttaag gaaatatttg
     3121 tatttcatgt agaaaagata ataaagtaac tggtcccact ttatagaaga attcaaatcc
     3181 caccaacata gcttaaaagt agtactgaac tccttgtatc ttttgctggt ctcatttact
     3241 ctttaaaata ttaataattt tagtaaaaag aaaaaaagaa aaagtttaag atcttatggg
     3301 ttctataacc aatcctagtt ttagtaagca atctagtatg gtagttgtct gttcaagagt
     3361 tatagtagat gtactgcgca gggcattaga caggataata tatagccgtt ccttgtcttg
     3421 atctccagtt aaatcctcta acaaattgca taatccttct agtgtttcta ttactaatcc
     3481 ttgaaagaca ggttctacaa ttgggaaaag atcctctagt tgtgtctcac ttaggattgt
     3541 aaaacattct tcacaaagat caaaaaaaat ataaaagaaa ttagaaacga attgttaaga
     3601 ctattaaaag acaaaattta tcttattatc ttacccacaa caattattac agctactaaa
     3661 ttcgaagata gacaaattac aattaaaggt aaacaattta gcattaatga tgctttgact
     3721 agaaataata tcatctttaa cagtacaggt ttaccgtcta ttagcatacc ttctggatta
     3781 actaaaaata atttgccaac tggagtacaa ataattggag caccatttga ggaaagcaaa
     3841 attttgactt tagcctataa ttatgaatgt aaaaataata ttctagataa aatgatacca
     3901 cctctactat taaaataacc aaaaaaggca ttgttatggc gaataagttt tttaattcag
     3961 aattagagga ttcacttaga tttttactag ggaaaataga aacaacaaaa aatatcaaaa
     4021 taaagatatg gtgtatttca taacctaatg aatatatgaa tatacacact ttttattaat
     4081 caactatttt ttacaagatg tgttattttt caaggaattt aacagatccg caacgttttg
     4141 tatagtagtt atcattcgtt taatcttagt ttaatcatat gttagcacta tattagataa
     4201 ttatgtctat ttttttatat gagaaagttt atgttataat aatgcccaaa ctcgatcata
     4261 gttcaaagta tttgatattg tattctacat tcgcaggatt tatatctgct tgggcaatat
     4321 caggattatt agttattgtt gatattgtat cacaaacacc tataggtact ttctttgcag
     4381 taataggaac ttcccttggt ttctatgatc ccgctgtatc acaatatatt ggatttgcat
     4441 tacatattgt aacaggcacc gtagcaggta acatttttgg tcaagtagca ttattttgga
     4501 acaaattgtt tccctctaat ctcaagcgag gaataactta tggaataata gcaggtgttt
     4561 ctctatgggt agtattattt ctacctctag ccacatttat aattcaaccc aaattagatg
     4621 cttttgctgt atctgctcca aaccaatatc tatttggaat agcagatcac tttcaagggc
     4681 tttatccact ggtagttata ggttctttag gatttcacat aatatacggt attatatttg
     4741 gattcatagt atggaggatg gtcgaattaa aaaacgttgt acaaaccaat aaagaataaa
     4801 tacaataagt cttaaagagt aagtcttatt ataaatatga atactcatac aataaacata
     4861 gggaaacaga gaagaaaatt catttttatt tatatctatt accatgaaaa taagagtcta
     4921 aaatatttaa tcaatattct tagaatgaaa ttggatctat atgttatagt tattttaggt
     4981 ctcattagaa ggataaatta gattgtcaaa aaagatgaca acgtagaatt atacatgtac
     5041 aatagcaaaa atacaaaaca aaatttaagg atattagtaa ctggtgcaac aggatttatt
     5101 ggtagtagaa ttgtcaaacg actactagct aatggacatt ataaggttag gtgtatgaca
     5161 agaaatcctg aaaatattta tgaacttttt aattcaactg gagatattgt tgaagtagta
     5221 aaagctgata cttctaatta tttagaatta gttgaagctc taaaagaagt ggatgtagct
     5281 ttttatctta tacattctat ggaaggttca acaaaaaaat ggcaagagtt ctcaaaaaga
     5341 gatagaattg cagctgaaaa ttttgccaag gcagcctcag aaacaaatac aaaaaggata
     5401 atttacctta gcggtcttat tgatattaaa cataaagatt tatctgaaca tatgcagagt
     5461 cgaaaggagg taggtgatat attaaggact tctaaggctg aagttacaat attccgtgcg
     5521 gctgttattc taggtcaagg aggtggttct tttcaaatgt tacagtactt ggtagagagg
     5581 cttcctgtaa tggtttgtcc aaaatgggta ctaacgaaat cacaacctat atcagtagac
     5641 gatgtggtaa cttatttaat aaaatcaata gaacttgagg atacagctaa taaggatttt
     5701 gatataggag gtccagaaat tcttagctat gtagacatga tgaaaagata ttcagctatt
     5761 ctaaaaaaac cattaaaaat tgttattatc ccatttttaa cacctagact ctcttcttat
     5821 tgggtagatt tgattacacc agtaaaggca tctcttgcta gacctttaat tgatagttta
     5881 aagcatgaag cagtagttca tgataatgaa atccaaaagt taattccaat taaactaatg
     5941 aactttgaag aatctatcaa aactgctatg aaggaacaag taagaaaagc caagataata
     6001 aaaaagcaaa aaacgtctga ttctcttaat agaaagatat taattttttc attgatttct
     6061 ttaggcataa ttggagcaac gtattatttt ttagataata aaaatgattt attcactcct
     6121 ctttggataa tattagccat tgtatggtat tttggaattc tatttgcatt attttttgtc
     6181 aaggatggtg cacgattagg ttccctggta gccggtatta taggatggat aacactattt
     6241 ttctggggat tcaataacgt atatttgata tatgataatt cgattaatct atactatcca
     6301 aatgttttag ttgctatacg taatgttatt ggagctattg tagctgggtt agttatagct
     6361 gcatcacata acctctttca taaaattaga gtactaggaa aataaaatta attatttttg
     6421 tttattaaaa gagatgaaat taattttagt taatttgttt tatttggtta ttttatacct
     6481 attaatcctt tgtggacata gataataaat aaaataaatt ccttatttat attaaacaag
     6541 gcaactggat atatctctat taaaattaaa ttactatatg caatgaacaa tcagatgtat
     6601 aagtagaata atcatatata ttttaactta tgaatattaa acaatattag tcccacaatt
     6661 ggaacttaag attcaaatac aacagcatta atctaagaag gaaatttata ggaatagaga
     6721 aaaattcaga aatgtttgag attgctaaag taagaataaa aaaacaagaa tttgaaagaa
     6781 ttaaagagga agatgctact aaataatgaa tttctataat tcatatgaag atagagatga
     6841 tcgattagac aaaaatgatg attggaaaaa taagtttcta taattatttc aaaccatatg
     6901 atttctgtgg agaacctttt ctaaaatcta atctaattta tgttactact aataataatg
     6961 atcctgagaa tatgatagaa actcttagac tccgcagaat ttttaacagt aatcaattac
     7021 gaccacgatg aacgatttta atagaaaaaa ataacataaa attagaattt tttataatat
     7081 ataatgataa gtactttgat aatagggatc ctctaacaaa aaattactat tttaaaacaa
     7141 tattataaga aactttcata aaattcgatt tgttattcta cgagagcatt tcttaaaaag
     7201 tcatattaat aatctcctac tgtattattc taatgaaata tcaaaatatt attgcctatt
     7261 tggtaattcc acttgctcta ctatctattc catcattgct agaacacgta aatgctcaga
     7321 ctgattcaga caaccaaact gctgcaccac aacaacaaga agatcaaaac atgactctca
     7381 ccactcaggc attaatgaaa gtagatatct ttgaattaca ggatactttg aagaaagcaa
     7441 agttagcagt agttgatgga aatctcaaag aagcactaac aggtgttaga gatgttgaat
     7501 cac
//
LOCUS       DATIAS010000149         2318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1662326, whole genome shotgun sequence.
ACCESSION   DATIAS010000149 DATIAS010000000
VERSION     DATIAS010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662326"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            683..1348
                     /locus_tag="VLA74_02955"
     CDS             683..1348
                     /locus_tag="VLA74_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49695.1"
                     /translation="MNKSYIRYIQQILNYNNKTFIMTSTLLALAVFMIALTSFSQSAQ
                     IASATIQDAQKIIEQGTVTSTPDPLPGHEAHQSITILRLKEGNPTYEGTLSFIASKPV
                     EVQILHRNMTQSSFNTATTVPTIPPEFGTMTILPLPGGSGQVVSSLILPQYPEDATSF
                     SASIPFVGNGLALHNIEGEEFVATYTIAAEQLGQAERTDDISISTGAINEDEDEDEEE
                     EDN"
     gene            1890..>2318
                     /locus_tag="VLA74_02960"
     CDS             1890..>2318
                     /locus_tag="VLA74_02960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49696.1"
                     /translation="MNKESKFIAVLVVIFIFSIQLLVFESYQSLFSSSDKNENNYFTI
                     STKEDNDKDDDEDDNNDNVGFDFETCKKILDSETCKKIGDSEIILNTNQLTKEEIQAE
                     EITRKYLEPADPNQNTIDILGQMQNKILESDMSQNQGPLTP"
BASE COUNT          913 a          340 c          309 g          756 t
ORIGIN      
        1 ccagaattta acgcagtaga ggaatgctgg aggcaaggta agtattacat tctatctaat
       61 tactactcca atttcaagaa tctgaaatat acaataacaa gatactatag aaccaaaaga
      121 ttccaactag atataacaaa atatctctta agatctacgc attaatgtta ttgagtatag
      181 attcttagat ctctattaat ataaaatgtt tccctaagaa tagagaagtt tctttctatt
      241 gctacatacg atttcaatct agataaacta tatttaacaa attatagctt taacatataa
      301 aatagaaata aagtggaagt ggcatctata tcttgtaagt atgtaccgag atttattgag
      361 agagaagata actataagtt ctaatataaa aaagaagaaa attatataga aataaagaca
      421 catcttgaat aaatcttaat tcagtattga caacatccta caatattcct gcaatacaag
      481 taacaaaaaa tatagctgat attataactt atctttcgta tataatctta aatttagcta
      541 ttgtgaatat actatgaaaa taagaaataa aaaatttata ccattaaaaa ctatcagata
      601 tatccttgaa taaaatcata accttaggca agaatactta tcttaaaaaa gaataaatca
      661 tacattaaat atctatcgtc taatgaacaa aagttatatc agatatatac aacagatact
      721 aaattataac aacaagacct tcatcatgac atcaacgttg cttgctctag cagtttttat
      781 gatcgctttg acctcttttt cacagagtgc ccaaattgct tcagctacaa tccaggatgc
      841 ccaaaaaatt atagaacaag gaacagtcac ttcaactcct gatcctctcc ctggtcatga
      901 agctcatcaa agcataacta tattgcgctt aaaagaagga aatcctactt atgagggtac
      961 attatctttc atagcttcta aacctgtaga agttcaaatc ctgcatagaa atatgacaca
     1021 gtcatctttt aatacagcaa caacagttcc aacgattcct ccagaatttg gaactatgac
     1081 tatattgcca ttacctggtg gaagtggtca agtagtatca tctcttatct tacctcaata
     1141 tccagaagat gccacatcat tctcagcatc aatcccattt gtaggtaatg gtttagcact
     1201 tcacaatata gaaggtgagg aattcgttgc aacctataca atagctgcag aacaacttgg
     1261 tcaagctgaa agaacagatg atataagtat ttctactgga gcgattaatg aagatgaaga
     1321 tgaagatgaa gaagaagaag acaattaaaa gagaataaat aatacaaagt attattgata
     1381 tagtagaacc aaattttttt attttatttt cttaaaacaa tctaaaattg ataaaatttt
     1441 tcctttcata tttgattctt ggttattatt attattatca gattattacc gttagttaag
     1501 gttaataaaa aaaattaatc tctaggtcta ttgtttgtga atgattttaa tgttcatcat
     1561 cctaatcttt aataaatata tctatctatt atataggtta atattttttt attattcctt
     1621 gcaatttgcg ttttaattta atatgctaat attatagttt ggtatcttat caaaagattg
     1681 ttggtggagg atcatatggc tagaaaatat taaaacacta gatttcaaat gataatgtaa
     1741 attatactga tcgaatgatg aattatttta ttattattac attcctcttt aaagtaattt
     1801 ctgccatcat taatttatca aattttataa tataacaaaa gtaataaaca taatcaataa
     1861 aagtaacttc ataataatat agatcaataa tgaacaaaga atccaaattc atagctgttc
     1921 tcgttgtaat cttcattttt agtattcaat tattagtctt tgagagttat caatcattat
     1981 tttcttcctc ggacaaaaat gaaaataatt attttaccat ttctacaaaa gaagataatg
     2041 acaaggatga tgatgaggat gacaataacg ataatgtagg atttgatttt gagacttgta
     2101 agaaaatatt agactccgaa acctgtaaaa aaataggaga tagcgaaata atattaaaca
     2161 caaaccaatt gactaaagaa gaaattcaag cagaagagat tacaagaaaa tatttggaac
     2221 ctgctgatcc taatcaaaac acaattgata tcctgggaca aatgcaaaac aaaatattag
     2281 aatcagatat gagtcaaaat cagggtcctt tgactcct
//
LOCUS       DATIAS010000150         5348 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1799026, whole genome shotgun sequence.
ACCESSION   DATIAS010000150 DATIAS010000000
VERSION     DATIAS010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5348
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1799026"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..486
                     /locus_tag="VLA74_02965"
     CDS             217..486
                     /locus_tag="VLA74_02965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49697.1"
                     /translation="MIPRFTAESSVYDNTSIIVPAAPAVYDNISIIVPAASAAPVSPV
                     VGRQCYRYCASWWSDCLDRCSNPYPGSPCYAKCDRIWNNCVDSCY"
     gene            complement(807..938)
                     /locus_tag="VLA74_02970"
     CDS             complement(807..938)
                     /locus_tag="VLA74_02970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49698.1"
                     /translation="MTIMETKNNNNNDSYIAVNIVKKKCVVYIIDKDLLFYNKENKI"
     gene            complement(1411..1656)
                     /locus_tag="VLA74_02975"
     CDS             complement(1411..1656)
                     /locus_tag="VLA74_02975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49699.1"
                     /translation="MSLPGFSAEATLYKTKAEYKSFHKYNYQNSKIIKPAHISFPCLR
                     CLIACEIRCNPNLGGAYCFVPCSIQCNRECGFIQPSP"
     gene            complement(1786..2673)
                     /locus_tag="VLA74_02980"
     CDS             complement(1786..2673)
                     /locus_tag="VLA74_02980"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSF49700.1"
                     /translation="MNPLAQTRLISLMNITRGHPDITIGVIDGPVDLNHPAFQGSRIR
                     TVKYSQVVECKKASDIACTHGTFVTGILCAKHELPVSGICPDCEIILNPIFTKEVTNS
                     KINYNNSDLPGATDEELSTAIIETIDTGAKIINLSLGLSTSSLKVYDKLQQAYDYALQ
                     KGVIIVVAAGNQGNIGNISLINHQWLIPVAACNEDGRLDPSSNFGSSIGNRGVMAPGV
                     NIMSTYPGGQYSHMSGTSVAAPFVTGSIALLWSIFPNATPAAIMHSIRRGISFNRRRR
                     SIIPPLLNVEAAWNELKNS"
     gene            complement(2715..3674)
                     /locus_tag="VLA74_02985"
     CDS             complement(2715..3674)
                     /locus_tag="VLA74_02985"
                     /inference="COORDINATES: protein motif:HMM:NF037034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49701.1"
                     /translation="MEDSLNLSSEKEKNESEISETSTTPSFDNRRIENPLLPTSTKSC
                     GCGGMNNNNNSDKIISSASYIYAVGKIVYRFPNRSIELELAQALGRRPEEDTKGRTHD
                     EVIYTALTDSANRYIARQICYVLTIEGLETYILVPSDPLDIDRLAEAIRPNPGVEDIN
                     VIIGRRGPIAPREMCNGLMVPIVIVDQIYSFDRDTLMKSIPKQKGTKEDQFRKTSDAI
                     FNYIIQIADNAGEIDEHRALNYLAVRYDEIYHRTQLLQDENYSFTGIEVRQSRLSGVE
                     KIVDVVFSYENRTNRAVQKWFCRVGVSGEFPYLVSPMQEYFER"
     gene            4305..4427
                     /locus_tag="VLA74_02990"
     CDS             4305..4427
                     /locus_tag="VLA74_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49702.1"
                     /translation="MMISLLYRGMYNTVWLKGSTRDEIAQAFNTSKGIKHMGQI"
     gene            4459..4608
                     /locus_tag="VLA74_02995"
     CDS             4459..4608
                     /locus_tag="VLA74_02995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49703.1"
                     /translation="MRELGKELRRQNMTAENCTIGFRGSNIMKKLGIPEERIEEFLTT
                     VFELS"
     gene            complement(5168..>5348)
                     /locus_tag="VLA74_03000"
     CDS             complement(5168..>5348)
                     /locus_tag="VLA74_03000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49704.1"
                     /translation="NNIRKRINFDEPIADMIERLKSEHRNFETKLQEIEDAINNSNKD
                     KDIVNATKIINKKHE"
BASE COUNT         1786 a          812 c          795 g         1955 t
ORIGIN      
        1 gtcatacacc atatgaaatg tttcttatga aaggaacaag attaaataat tccagtaata
       61 aaaagaaaat taagcagata aaaagtgtta cccatgttgg taagtgaatc tgttacctat
      121 gtatgtaagt acaacagtta atagccaaaa aaagataaaa ttattagatt atctgacagc
      181 aaacttttta agataatttg atcatcattt aatattatga ttccaagatt cacggctgaa
      241 tcttctgttt atgacaatac tagtataatt gtgccagctg cacctgctgt ttatgacaat
      301 attagtataa ttgtgccagc tgcatctgct gcacccgttt cacccgttgt aggcagacag
      361 tgttatcgat attgtgcctc ctggtggagt gattgtcttg ataggtgttc taatccctat
      421 ccaggttcac cttgttatgc taaatgtgat cgaatatgga acaattgtgt tgattcttgt
      481 tattaaggtg taggatagct ctgttaattt aagaagatat tcgccccttt taatccaaac
      541 ttatattatt attattatta ttagtttttg tatcattata catagagaaa taaagaattg
      601 tatccaattt tgtctatgta atattgtttg tggtatcatc atcatctttc cctagattat
      661 atatacacct atacatattt ctcaaatgtc tcctattttt taaatcacat attggctgtt
      721 aattcacaaa ttactacatg acattttcta tcttcatatt ttttatccaa atgaaaagta
      781 aataatatga tttctgtagt atattctcat attttatttt ctttattata gaacaataaa
      841 tctttatcta ttatgtatac aacacatttt ttctttacta tatttactgc aatatatgaa
      901 tcattattat tattattttt tgtttccata attgtcatta tatttagctt tctcaccctt
      961 ttttttatat tgtgatatta ttactagtag aaactaacta gatgatgaac aaagctacaa
     1021 aaatctatca gagctctaca ttgttcatat atatacagca gcatacagat attcccattc
     1081 aataaacaag attttactat gttaagatag attatgtata acaatgggtt tgctagttgt
     1141 atgagagaat aatagataac agaagaagac ttttacatgt attcaataaa gtaacgtaat
     1201 ccttaaatga taatatttag aaatattagt tgcagtagta gtagaagaaa taagaaaaaa
     1261 aagtttgtta gggttttgtt ttgttgaatc aaagatttac tcttgaatca tcaaatggac
     1321 tgtgatatgg gttaagtagt actactactg gttttattaa aaatttttat ttgataatat
     1381 gattaatttc tctataataa agaaacttac ttaaggcgaa ggttggataa aaccacattc
     1441 tcgattacac tgtattgaac aaggtacaaa acagtatgct cctccaaggt ttggattaca
     1501 tctaatttcg caggctatta aacatcttag acatggaaaa cttatgtgag caggctttat
     1561 aattttgcta ttttgataat tatatttatg aaatgattta tactctgctt tagttttgta
     1621 taaagttgct tctgcactaa atcctggtaa actcatttta tttactattg attaatagta
     1681 tatcttcatt aatatagttt gcttcccctt tatatcataa gaggtttgta agtgtgtaat
     1741 gtgtatatct atatcataat attttttctt cccgatatta ttattttaag aattttttaa
     1801 ttcattccat gctgcttcaa cattcagcaa tggaggtatt attgaacgac ggcggcgatt
     1861 aaatgatatt cctcttctta tagaatgcat tattgctgca ggagtagcat taggaaatat
     1921 tgaccaaaga agtgctatac ttcctgtcac aaatggtgcc gctacgctag taccgctcat
     1981 atggctatat tgtcctccag gataagtact cattatatta acaccaggag ccatcactcc
     2041 tctatttccg attgatgaac caaagttaga agagggatca agtcttccat cttcattgca
     2101 tgcagcaact ggaataagcc attggtgatt aataagtgaa atattaccaa tatttccttg
     2161 atttccagct gctacgacta taattacacc tttctgaagc gcataatcat atgcttgttg
     2221 tagtttatcg taaactttta atgaagaagt tgataatcct aaacttaaat taataatttt
     2281 ggctcctgta tctatagttt ctattatagc agtagatagt tcttcgtctg tagcgccagg
     2341 caggtcacta ttattataat taattttact attagttact tcttttgtga aaattggatt
     2401 taatataatc tcacaatctg ggcatattcc agatacagga agttcatgct tggcacaaag
     2461 aatacctgtt acaaatgtac catgagtaca tgctatatca ctagcttttt tgcattcaac
     2521 aacttgtgaa tacttaacag ttcttattct agatccttga aatgcaggat gattaaggtc
     2581 aacaggtcca tcgatgactc caattgttat atctggatgt cctcttgtaa tattcattag
     2641 tgaaattaat ctagtttgag ctagtggatt cattgcattt ttattttgta ctttttattt
     2701 tcttctttta tgtattaacg ttcaaagtac tcttgcatag gactaacaag atatgggaat
     2761 tcacctgata caccaactct acaaaaccat ttttgtacag ccctgttagt acgattttca
     2821 tatgaaaata caacatcaac tattttttct actccactga gacgggattg gcgaacttct
     2881 ataccagtaa aagaataatt ttcatcttgc aataattgag ttctatgata tatttcatca
     2941 taacggactg ctaaataatt gagagcacga tgctcatcta tttcacctgc attatcagct
     3001 atttgaatta tataattaaa aatagcatca gaagtttttc taaattgatc ttcttttgta
     3061 cctttttgct ttggaattga tttcataaga gtatctctgt caaaggagta tatttgatct
     3121 acaataacaa taggaaccat aagtccattg cacatttcac gaggagctat tggtcctctt
     3181 ctaccaataa ttacattaat atcctctact cctggattag gcctgattgc ttcagccagc
     3241 ctatcaatat ccaaaggatc actaggaaca agaatatatg tctctaaacc ctcaatagtc
     3301 aatacataac aaatttgacg tgctatatag cgattagctg aatctgtaag agcagtgtaa
     3361 ataacctcat catgagtacg tccttttgta tcttcttcag gtctgcgacc taatgcttgt
     3421 gctaattcta attctattga tctattagga aaacgataaa caatttttcc tacggcataa
     3481 atgtaagaag ctgaggatat tattttatca gaattattat tattattcat gcctccacaa
     3541 ccacatgatt tagtagatgt aggaagtaat ggattctcta ttctacgatt atcaaaagaa
     3601 ggtgtagttg atgtttctga tatttctgac tcgttttttt ctttttctga acttagattt
     3661 agagaatctt ccatatttta caatgaataa ccagttatag ataaagcatt cggtcacaca
     3721 ctaatcttta aaattacaaa attattttaa atggaatgat ctttacagta cttgggatac
     3781 atgactatta taaaaatata ctaacgatgc tgatgcaaaa ttacttccta tattttttat
     3841 ctattgaact catgaaacct agaaggcctt gaaatattgc acgaaagttt atgtcttcta
     3901 atgtataacc aataaacagt attgatcatt ctgctattct ttacgaatgc tttctcttcc
     3961 tggaggattt ttaccctcca ttatcttttt ttgttgaaat tctccttaac ctgattacga
     4021 tcttcgatat tgctattaca aaatcaatta tagtataggt tttcaaaaaa gaattagagg
     4081 attttcatta aaataatttg agcatatttt ttatgctaaa aatatatttg aaaagatgat
     4141 actatatcta ctacatatat tctcgcacaa attatttgac gaacaaactg acgaaagtga
     4201 ccgaaaaaaa taaaaagtga cggagtgaaa aaatagcata taaagttttt tttcctgctt
     4261 atatagcttt taaaatacta taatagatat gattaagaat actaatgatg atatccctcc
     4321 tatatcgagg aatgtataac acagtatggt taaaaggatc tacacgagat gaaatagctc
     4381 aagcatttaa tacaagtaaa ggtatcaaac atatgggcca aatttagaaa taaactgggc
     4441 cattatgaag cagatgcatt gagagaattg ggaaaagaat tgcgacgaca gaatatgacg
     4501 gcagagaact gtacgatagg ttttagagga tccaatatta tgaaaaaatt agggataccg
     4561 gaagaaagga tagaagaatt tcttactact gtatttgaac tatcataaaa gatcggtata
     4621 tctccagaac ttctcagaga agctttaata gaattttata aaatttcgca gacaattcct
     4681 ttttcagaaa ttccaattta tttacaaaaa atgagggagg aaatagaaga agcagaaaat
     4741 aaaaagaagc aaatctagaa ggctatggca gtatattatg ttgtctttat gaaactattt
     4801 ttggtctgat aaccggtgtt aataatggat ataaataatt gttaataata ttttataaaa
     4861 cttttggaga taacttaatt gacatattaa tatgattata atatatggtt ttactacagg
     4921 ctaggacaat agcttttaat tgagtataca cctttgccta tttattgtta gaatattatt
     4981 attactatca taatatgtaa caatttgagg taaataattg ttcaataggt caatgataag
     5041 gaaatgactt aacatacatt gacaaatgag atttttgcaa ataaagagta acaattattc
     5101 ttttgcctta tgcattataa ctctcaagag cctggcttct tcttcgactg catgatgtat
     5161 aatagaatca ctcatgtttc ttatttatta tctttgtagc atttactata tccttatcct
     5221 tgttactatt attaatagca tcttctattt cctgtaattt agtttcaaag ttacgatgtt
     5281 ctgattttag tcgctcaatc atatctgcta ttggctcgtc aaaatttatt ctttttctaa
     5341 tattatta
//
LOCUS       DATIAS010000151         2135 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1935595, whole genome shotgun sequence.
ACCESSION   DATIAS010000151 DATIAS010000000
VERSION     DATIAS010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1935595"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VLA74_03005"
     CDS             complement(<1..609)
                     /locus_tag="VLA74_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49705.1"
                     /translation="MKSIKLIISILLLTILPMLFVTTTFTYVPIFGDGLFMEELSASA
                     AGRDLSLLIKMSPPVVTTETLKGGQNPLIQFRLSDGATNETIKHATYLIEIEKSGKRL
                     MLDTFHSHSGNLGIQMRPSNADQITIYGELDPILLSYTGDMEHPVSATGPIFAEGGLY
                     HFIVTILTIDFDRTFLPTDKQPVFEGWLSVGYTMDKDLEINGA"
     gene            812..1186
                     /locus_tag="VLA74_03010"
     CDS             812..1186
                     /locus_tag="VLA74_03010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49706.1"
                     /translation="MKVVVISVFLISLAVILAFQTQLSTKAFAVDNNWYVGEGVTKDM
                     YVKYKMSHFDTNNDREFTMVIYFKDQDDKGNWIAPVYVEDQGKVINGTFILSPLDLSA
                     LGTSKIPPEMAKYRSAYANSLQ"
     gene            1220..1369
                     /locus_tag="VLA74_03015"
     CDS             1220..1369
                     /locus_tag="VLA74_03015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49707.1"
                     /translation="MNAGSWGKIASIGGPEIKPVGHQELNIPAFPEPIDTTRVEYYKS
                     VSSNM"
     gene            1502..1855
                     /locus_tag="VLA74_03020"
     CDS             1502..1855
                     /locus_tag="VLA74_03020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49708.1"
                     /translation="MEVTPPLLQRTARGDYFMELNWDPTPIMAGKETTFTLDILDKDK
                     FPLTQVSYDFTVTDSNDTTIIDLQNQRAQQGTKSHTMTFDKPGLVNVKVKVNSVKGVG
                     TGMFVEEVVFKVPIK"
BASE COUNT          763 a          324 c          338 g          710 t
ORIGIN      
        1 tgctccatta atttctagat ctttatccat tgtgtaacct acactaagcc aaccttcaaa
       61 tactggttgt ttatctgttg gaagaaaggt tctatcaaaa tcaattgtta gtatagtgac
      121 aataaagtga taaagtcctc cttcagcaaa aatgggccct gttgcagata caggatgttc
      181 catatctcca gtataagata gtaaaatagg gtctagttcg ccatatattg taatctgatc
      241 agcattggaa ggtctcatct gtattcctag attgccacta tgagaatgaa aagtatctaa
      301 catgagacgt tttccacttt tttcgatctc aatcaaatat gtcgcatgtt ttatagtttc
      361 attggtagcc ccatcagata atctaaattg gattaaagga ttttgaccac cttttaaggt
      421 ctctgttgta actacaggag gtgacatctt tatcaagagt gaaaggtctc ttccagccgc
      481 tgatgctgat aattcttcca taaataaacc atctccaaat attggaacat atgtaaaagt
      541 agtagtaacg aatagcatag gaagaatagt taataataaa atagaaatta tcagtttaat
      601 agatttcata ataataataa taataattta taatattata aatttactgt tttattagct
      661 agatcttata ataaaaattt tttatggtta cttctaaaac aataagagga aagcaattta
      721 aaattgcata tccgagatat aagaaggtat aataacattt atcaaatcta tttaaatata
      781 attaatgaaa aaagataata gacaatcaaa cttgaaggta gtggttattt cagtcttctt
      841 gatttctctt gctgttattc ttgctttcca gacacaatta tcgacaaaag cttttgcagt
      901 agataataac tggtatgttg gagaaggtgt cactaaagat atgtatgtta aatataaaat
      961 gagtcatttt gataccaata atgatcgaga atttacaatg gttatctatt tcaaagatca
     1021 agacgataaa ggaaactgga tagcaccagt ttatgtagaa gaccaaggaa aagtaataaa
     1081 tggaaccttt atactcagcc cgctagattt atccgcttta ggtacttcta aaattccacc
     1141 agagatggcg aaatatagga gcgcttatgc caattcatta caatgactag cagcttatgt
     1201 tcctaaacta ggacaatcat tgaatgctgg atcatgggga aagatagcgt ctattggtgg
     1261 acctgaaata aaacctgttg gacatcaaga attaaatatt ccagcatttc cagagcctat
     1321 agacactaca agggtagaat attacaaatc tgtatccagt aatatgtaga ttttaaatga
     1381 atttccatat ccagtgatgg ctaaaactta tgtcgatgta actactggct ctcctcctat
     1441 ccaatttcaa tatttttaag agacaggtaa aggtcaacca aaaatacctc aatcatcgat
     1501 aatggaagta actcctccac ttttacaaag aactgctaga ggagattact ttatggaact
     1561 gaactgggat cctactccaa taatggctgg gaaagaaacg acatttactt tagatatatt
     1621 agacaaagac aaatttccat taactcaggt tagctatgat tttactgtaa ccgattcaaa
     1681 tgataccaca ataatagatt tacaaaatca aagagcacaa caaggcacca aatctcatac
     1741 tatgacattt gataaacccg ggctagtaaa tgttaaagtt aaagtgaaca gtgttaaggg
     1801 agttggtact ggaatgtttg ttgaagaagt agtgtttaag gttcccataa aatagatcct
     1861 tctttttttt caatctcttt ttttagaaat aaaataatat ttgttgataa tttatactca
     1921 ataaatatag tcttctcagg taaaaaatcc gtaattatga tgatttatgg attctttgtt
     1981 gttgttattt ctatcataat atatttaata tcagtagaat ttaaatccca taaattttat
     2041 cttaataata ttagaccatt gttagatttt tttactagta caatttaatt tttagaatgc
     2101 gaaaattcaa gtaatatatt caatattcta ctctt
//
LOCUS       DATIAS010000152         2253 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_436855, whole genome shotgun sequence.
ACCESSION   DATIAS010000152 DATIAS010000000
VERSION     DATIAS010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436855"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..558
                     /locus_tag="VLA74_03025"
     CDS             202..558
                     /locus_tag="VLA74_03025"
                     /inference="COORDINATES: protein motif:HMM:NF016157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF424 family protein"
                     /protein_id="HSF49709.1"
                     /translation="MFKEDESHFDKSGSDINPQYYVRKMRYQGSLMINICDENLLGKT
                     IKDESVNIEITRDFFDELMSEEEIHYLLKRCSIANLIGERVIKKTLKLGLAKKESVKV
                     ISDIPFLMIYTFHGNY"
     gene            673..1230
                     /locus_tag="VLA74_03030"
     CDS             673..1230
                     /locus_tag="VLA74_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HSF49710.1"
                     /translation="MIYQRSIRIQKDRIGAIIGRKGSTKQEIQKKFNVEIEIDGDYGD
                     ITLKSKGDDLNVLDINNAMEIITAISKGFSPERAFNLFNEDNILEVIDLRNFVGRSEN
                     GLSRIKSRLIGERGKSRRTIEELSGAYISIYGHTISLIGTSEQVRLASEAINMICSGR
                     SHKIVYNFLQETRRKAKIEKMKLWE"
     gene            complement(1467..2045)
                     /locus_tag="VLA74_03035"
     CDS             complement(1467..2045)
                     /locus_tag="VLA74_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HSF49711.1"
                     /translation="MRIIVGITGSSGVIYGIKTMESLRSLDIETHLILSEWGANTIKI
                     ETDTVPSKVKSLATYCYDNKNMAAPISSGSFRTDGMVIIPCSMKTLASISNGFDDTLI
                     SRAANVCIKENRKLIIVPRETPLSKIHLENMVKLSALGVTVLPAMPGFYFKPSSLDDI
                     IFHIVGKVLDQFNIEHNLFTRWGNKKSNNEIV"
BASE COUNT          857 a          301 c          381 g          714 t
ORIGIN      
        1 tacaaagaaa ttaggaaaga tataatacta aatttgcagc aatcaaaatt cagcctaaca
       61 tttttttact ttatggaggt aatttgctaa taatcgtatt ttgtttccat tttagtgaaa
      121 acaaacatga aagtgcaaaa agaaattatt aatatacaac caagatgtta tattttttat
      181 aaataaagaa ggggaattga tttgttcaaa gaagatgaaa gccattttga taaatctggc
      241 tcagatatca acccacagta ttacgtaaga aaaatgcgtt atcaaggatc attaatgata
      301 aatatttgtg atgaaaatct gttgggaaag acaattaaag atgaatcggt aaatattgag
      361 attacaagag atttttttga tgaattaatg agtgaagaag aaattcatta tttacttaaa
      421 agatgttcca tagcgaattt aattggcgag agagtaatta aaaagacatt aaagttagga
      481 ttagcaaaga aagaaagtgt caaggtaatt tcagatatac cttttttaat gatttacaca
      541 tttcatggaa actactagat aaaagtatta tccggaaaaa gaaaatttaa taaaaataat
      601 atttttttaa tacatccaaa taaatgaata ttttataagt aatattttgt taatttatct
      661 aggggaaaaa tagtgattta tcaaagaagt attagaattc agaaggatag aattggagcc
      721 ataattggca ggaaaggatc tacaaaacaa gaaattcaaa aaaagtttaa cgtagaaata
      781 gaaatagatg gtgattatgg tgatattacc ctaaaatcca aaggagacga tttaaacgtg
      841 cttgacataa acaacgcaat ggaaataatt actgctatat caaagggttt ttctccagaa
      901 agggcattca atctatttaa tgaagacaac atacttgagg ttattgatct cagaaacttt
      961 gtgggaagat cagaaaatgg cttatctaga ataaaaagta gattaatagg agagagagga
     1021 aaatcgagaa gaaccataga agagttgtcg ggagcatata tttcgattta tggtcataca
     1081 attagtttga taggaacctc cgaacaagta agacttgcct cagaggctat aaacatgata
     1141 tgttctggaa gatctcacaa aatagtctat aatttccttc aggaaacaag gaggaaggca
     1201 aagatcgaaa agatgaaact atgggagtaa aagtttatgt aaaactgtac cattttcaag
     1261 gcaaacataa attagagttt tgaaaattga aagggttata gctataatta actaagtaca
     1321 cagatagatg aatatacaat ctgaaacaca tattttatgt aaactacatg aattcataaa
     1381 tattcaatat atgaaaaaat tattagccgt aatgtattgt ttatttactt aattatatag
     1441 aaacatttaa aacgttaaaa ttataactat acaatttcat tatttgattt tttgttgccc
     1501 catcttgtaa acaaattatg ttcgatgtta aattgatcca acacttttcc tactatatga
     1561 aaaattatat cgtccaatga agaaggtttg aagtagaatc ctggcatcgc tggcaagaca
     1621 gtaacgccca atgctgaaag tttgaccatg ttttctaggt gaatttttga aagaggggtt
     1681 tctcttggca ctataatcaa ttttctattt tctttgatac aaacatttgc agctctggaa
     1741 atcaaagtat catcaaatcc atttgaaatg cttgcaaggg ttttcatgct gcaaggaatt
     1801 attaccattc catcagttct aaaagaacca cttgagattg gagcggccat atttttatta
     1861 tcataacaat aagtagctaa ggattttacc ttgctaggaa ctgtgtcagt ctctatctta
     1921 atggtatttg caccccattc acttaatatc aggtgtgttt caatgtcaag tgaacgtaac
     1981 gattccattg tctttattcc ataaattact cccgagctac ctgtgatccc gactattatc
     2041 ctcattataa cttgagagtt agaagaccta tgatatgtac ctatcttagt tgcgtataag
     2101 aattaatttt tataatgccc acataccaag ataaatctat aataaagatg cttacaattt
     2161 ttgggacaat tgctcttgat acaacaagaa ctggttcaag aaccgtaaca agaataatgg
     2221 gaggtgctgc tacgtattca tctctatctg cat
//
LOCUS       DATIAS010000153         2511 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1662565, whole genome shotgun sequence.
ACCESSION   DATIAS010000153 DATIAS010000000
VERSION     DATIAS010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662565"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1322)
                     /locus_tag="VLA74_03040"
     CDS             complement(108..1322)
                     /locus_tag="VLA74_03040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49712.1"
                     /translation="MTEFKNSKTTLQYTNDPLQNFLYALKAPDSKRQYPRRFEYFLDY
                     LGLTGTLNEKCLIFYEQAKHEPLWTQHQIMQYIEYQKERVEKGEIKESTINNYYKSVK
                     LFCEMNDIILNWKKIAKGKPQYSDSANDRSPTFDEIKKLLDFPDRRIKLIVLVMMSSG
                     IRVGAWDYLKWKHIIPIRNDKTEIIAAKIIVYAGQKEEYFSFITPEAFRALEEYVEFR
                     RSCGETITGESWLMRDTWKSTNVSCYNRSGLATVPRKLKSSGIRSIISRAEWEQGLRI
                     PLNNGVKRHEFQAVHGFRKFFKSHCEQVMKSINVEVLMGHTIGVSDSYYKPSEKEILH
                     DYLKAINILTIYKNNNAIIEKEIKDLKEKNENNEYIIKSKLQERDDAITALSDQVMSL
                     VEEINKLKNQRF"
     gene            2045..2511
                     /locus_tag="VLA74_03045"
                     /pseudo
     CDS             2045..2511
                     /locus_tag="VLA74_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011306353.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          812 a          380 c          386 g          933 t
ORIGIN      
        1 taaaagaaaa acattattgt tgttatcaaa agacaaaaag tttatgacta ttttaaaaaa
       61 gataaaaaaa gaaattaata atcaaattga tcaattattg taattgatta gaatctttgg
      121 tttttcaatt tatttatctc ttctactaga gacataactt ggtcagacaa agcagtaatt
      181 gcatcgtctc tctcttgaag ttttgatttt ataatatatt cattattttc attcttttct
      241 tttaaatctt taatctcttt ttctataatt gcattattgt ttttgtaaat tgttaaaata
      301 ttaattgctt tcaaataatc atgtaagatt tctttttcag aaggtttgta ataagaatca
      361 gaaactccta tcgtatgacc cattaaaact tctacattga tagatttcat aacttgttca
      421 caatgggatt taaagaattt tctaaatcca tgaactgctt gaaattcatg acgttttact
      481 ccgttattaa gtggaattct taatccttgt tcccattctg ctcttgaaat aatgcttcta
      541 attccactgc tctttaattt tcttggtact gtggcgagac cacttctgtt atagcaactt
      601 acatttgtag acttccaagt atctctcata agccaacttt ctccagttat tgtttctcca
      661 caagatcttc gaaattcaac atattcctct aatgccctaa atgcttcggg agtaataaaa
      721 gaaaaatatt cttctttctg accggcatag actataattt tggctgcaat aatttcggtt
      781 ttatcatttc ttattggaat aatatgtttc cattttaagt agtcccatgc tccaactcta
      841 ataccactag acatcataac caaaactatt agctttattc gtctatcggg aaaatctaac
      901 aattttttta tttcatcgaa tgtaggtgat ctatcatttg cagaatcact atattgtggt
      961 ttacccttag caattttttt ccaatttaaa attatgtcat tcatttcaca gaaaagttta
     1021 acagatttat aatagttgtt gatagtagat tctttaattt ctcctttttc aacgcgttcc
     1081 ttttgatatt caatatattg cattatttga tgttgtgtcc acaaaggctc atgttttgct
     1141 tgctcataaa aaattaggca tttctcattt aaggttccag tcagtccaag ataatctaaa
     1201 aaatattcaa atcttctagg atattgtctt tttgaatctg gtgctttaag agcatataga
     1261 aaattctgta aaggatcgtt tgtatattgc aatgttgtct ttgaattttt gaattccgtc
     1321 atcaatgtgt tattatcgta tatatttact tataactgat ataaatagag gcatatttgc
     1381 tacgggcccg tcgggagttg aaccctgcat gtagtagggt tctactacta ttacaaattt
     1441 attatatctt tttgttcacc actattaaga aatgaaattt tattttagat tatatcgtta
     1501 tatgaattga tgaaatgttc taattcaatt gtccttttac tgcttaattt aacagaggct
     1561 taataataaa taattctgct taaattaata ttcaatagtc agagataaaa tttacatatt
     1621 cgaataatgt atttttctat atggatatga ccagttcttg tgctaattgt ggtaggaaga
     1681 ctcaagatta tcctattttc tgttatatgt gcaatgatta ctattgttca gagtcatgtc
     1741 acttagaaaa acataaagta caatatcaga aattttgaaa tgtgaaattt actttgagtt
     1801 gacctttcat atataataat ttagaagttg ttcattgtaa ggctctgtaa acttgtcagt
     1861 tgattcttta aaataaaggt gtcaaaagtc ggttgataaa atcaacagtt ttttattcta
     1921 ccttcacttg tcataataca cctaagagcc tatccgaaaa gtagtttata gtttttaagt
     1981 ttatggtaca atagatttat tcggtaaagc taagtgtctc tacactatat ataacgagat
     2041 tagtttgata tcggaaattt ctggaataga ttcatcttat gaaatacctg atgcattatg
     2101 gaatcaaatt ttccctcttc ttgtatataa acccaagagg aagaagaaga caggtcgtcc
     2161 aagaatggat gatagaaagg caatgaatgc tatcttctac ctagcacgta ctggatgtca
     2221 gtggaaagca ctaccacgaa gtcttggtgc atccagtact gtacatgaca gatttcagga
     2281 atggagacaa gatggcgtat tcaaacgtat gtggattgac ggtttgaaat tatatgatga
     2341 aaaaattggt ataaattgga aatggcaatt aatggatggt gcaataacca aagcgccact
     2401 tgggggaaaa aagtacagga ccaaatccaa cagacagaag aagtaaatca ggtaccaaac
     2461 gtagtcttct tgtagatggt cagggcattc ctcttggaat tactgtagat g
//
LOCUS       DATIAS010000154         2151 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1662894, whole genome shotgun sequence.
ACCESSION   DATIAS010000154 DATIAS010000000
VERSION     DATIAS010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662894"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VLA74_03050"
     CDS             <1..264
                     /locus_tag="VLA74_03050"
                     /inference="COORDINATES: protein motif:HMM:NF013611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HSF49713.1"
                     /translation="VKGDFAKIDFGASTIKNDINISHINGKKGDYVLVHAGYAIEVLD
                     LNEAENMINYWKNITMWKCKRCEIAEECPTGNIVKEINSKKPT"
     gene            282..1397
                     /gene="hypD"
                     /locus_tag="VLA74_03055"
     CDS             282..1397
                     /gene="hypD"
                     /locus_tag="VLA74_03055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HSF49714.1"
                     /translation="MVLEEYKDPQLAKKLSEKIHTLAEEIEEDLLFMHVCGSHEWTIS
                     HYGIRSLLPKNIEIRPGPGCPVCITPSEDIDNAIKLALEGKTILVYGDMSRSKGTNGK
                     SLLECRAEGGQVQVIYSIQDAIRLAKSNPEKEFIFFAVGFDTTSPPTAYEILNGFPSN
                     LSIILSYRYMPPIVGAVLKSSILGIDGVINPGHSSTITGMKPYYPYFLETKKPQVFSG
                     FEPIDILISIVMLLNQIKNANHKLENEYTRSVTWEGNTKALKKLEEVFDLDTEYVRGV
                     AYIGESGFVLKDKYKHLDAYPKYGLTKKKSNDHFVYGARCGEVIIGLSEPTECPLYMK
                     ECTPHSPKGPTMVSFEGTCRIWSEHAIIKSIKKITKS"
     gene            1480..>2151
                     /locus_tag="VLA74_03060"
     CDS             1480..>2151
                     /locus_tag="VLA74_03060"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSF49715.1"
                     /translation="MAFFIGNSFCKLCQNNEENLQNELLFCSNGLKTKGLFPPFKSFH
                     SARLPHSTKIWITPLIKSDLNRNIDNNYNSNYFEFNCLDIDDLGSIDKFNSFFSEIKL
                     HSKLYKFRPDVNAICHTNSPFTISSFLDGKLENVHGEAALILGDIPVIKFDRDLYEID
                     NSENDTGKILDLIAKSSIGEPLRPIRTVILPKHGVIALGACLHEARAFVEILEEWARF
                     NIYSKI"
BASE COUNT          801 a          287 c          371 g          692 t
ORIGIN      
        1 gtaaaaggag attttgccaa aattgatttt ggtgctagta caattaaaaa tgatattaat
       61 atttctcata ttaatggaaa gaaaggggat tatgttttgg ttcatgcagg atatgcaata
      121 gaagttttag atttaaatga agcagaaaat atgataaatt attggaaaaa tattacaatg
      181 tggaaatgta agcgatgtga aatagcggaa gagtgtccga caggaaatat tgtaaaagag
      241 attaattcaa aaaaacctac ttagctaagt atgtgattaa tatggttctt gaagaataca
      301 aagatcctca gctagcaaaa aaactgagtg aaaaaattca tacccttgca gaagaaatag
      361 aagaagatct actttttatg catgtatgtg ggtcacatga gtggacaatt tctcattatg
      421 gtattagatc actgttacca aaaaatatag agataagacc gggaccagga tgtcctgtct
      481 gtataactcc ttctgaagat attgataatg ctattaaact tgcacttgag ggaaagacaa
      541 ttttagttta tggtgatatg tctagatcta aaggtacaaa tggcaaaagt ttactagaat
      601 gtagagctga agggggacaa gttcaagtca tttatagtat tcaagatgca ataagacttg
      661 caaaaagtaa tccagaaaaa gaatttattt tctttgctgt aggttttgat acgacttctc
      721 caccaacagc ctatgaaata ttaaatggat ttccttctaa tctttcaata attctttcct
      781 atagatatat gcctcctatt gttggtgctg tattgaaatc ctctatttta ggaatagatg
      841 gcgtgataaa tccaggtcat tcttctacta taacaggaat gaaaccatat tatccttatt
      901 ttctggaaac taaaaaacca caagtttttt ctggatttga acctatagac atactaatta
      961 gtatagttat gttgcttaat caaataaaaa atgcaaatca taaacttgaa aatgaatata
     1021 ctagatctgt tacttgggag ggcaatacca aagcactaaa aaaacttgaa gaagtatttg
     1081 atctggatac tgaatatgtg agaggagttg cctatattgg agaatctgga tttgttctta
     1141 aagacaaata caaacatctt gatgcctatc caaaatatgg attaacaaag aaaaaatcta
     1201 acgatcattt tgtatatggt gcaagatgtg gggaagtaat tataggcttg agtgaaccta
     1261 cggaatgtcc actttatatg aaagaatgta ctcctcattc ccccaaagga ccaacgatgg
     1321 tttcctttga aggaacttgc agaatctgga gtgaacatgc cattataaaa tcaataaaga
     1381 aaattacaaa gtcatgaagg caataaagca tttgatgaaa atattaaatt ataataatct
     1441 attcaaaatt aaattaaatt atactagtag aagatagata tggccttttt cataggaaat
     1501 agtttttgta aactatgtca gaataatgaa gaaaatcttc agaatgaact tttattttgt
     1561 tccaatgggc taaaaacaaa aggacttttt cctcccttta aatcatttca tagtgcaaga
     1621 ttacctcatt ctacaaaaat ttggataact cctttaatca aaagtgattt gaatagaaat
     1681 atagacaata attataattc caattatttt gaatttaact gtttggatat tgatgatctt
     1741 ggctctattg ataaatttaa ttccttcttt tctgaaatta aattacactc taaattatat
     1801 aaatttagac cagatgtaaa tgctatttgc cataccaata gtccatttac aatatcttca
     1861 tttcttgatg gaaaattaga aaatgttcat ggagaagcag cattaatctt aggggatata
     1921 ccagttatta aattcgatcg agatttatat gagatagata attcagagaa cgatactggt
     1981 aaaatattag atcttattgc taaatctagt ataggcgaac cacttagacc aataagaaca
     2041 gtaattttac caaaacatgg agttatcgct ttaggtgcat gtttacatga ggctagagct
     2101 tttgtcgaga tacttgaaga atgggcaaga tttaatatat attcaaagat c
//
LOCUS       DATIAS010000155         2447 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_982261, whole genome shotgun sequence.
ACCESSION   DATIAS010000155 DATIAS010000000
VERSION     DATIAS010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_982261"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VLA74_03065"
     CDS             complement(<1..519)
                     /locus_tag="VLA74_03065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49716.1"
                     /translation="MRKLNRLYLSILLGIILGNLLLVSSCQTFIKDIYAHQLFNSSGQ
                     KIGKYYVQVATDPEIPTTGENTKIMMRISSTDGTELSAVPISIEIMKNSQDIDKIPQI
                     MVKNGHHEFDYKFLEPGNYVFYVYLQDIYHSGGKTITYTFNISTLNPFGYIFYSLISF
                     AVVTPIVVIAVIF"
     gene            621..>2447
                     /locus_tag="VLA74_03070"
     CDS             621..>2447
                     /locus_tag="VLA74_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSF49717.1"
                     /translation="MAEPSNNKSSNLKFSDKIVVITGSGTGIGQAIAKKFAEKGASII
                     IMGRRKEPLDKTTDILMDIMKNVGSSGTVRAFSGVDVSDEIGINEMFSTIKQEFGKVD
                     IIVNNAGVSGPVKTFTNASFQDFKDCVAIHLTGTFWTSVQGLEVMERGSKIITIATFF
                     TEENKYEQRPYRFRTPYTAAQGAKNRLAEALAWELVDRGIKSVATNPGPVHSDRIYKT
                     VYPKAAAEFLRIGGYPGLESPEIELAATKGLDLLGEPSEVFSKGIMEIAEQISNSRSS
                     VSSNGSSTYSANQGDLNKTIEGMLIKIQEIAEKIQNNTSKMIVDNEFLSQEEVAEMVL
                     TLSDDTISKLINGRVIPNDRVFYPVKPIVGTSIDDNNIQDLKEKVVVITTTSSKEKDV
                     QRVISLANKLNDIGVKQVIILSRNSDDMKFYKDFHSHSLDLLDEEKVKRIFNTAKTKF
                     GNIDAIIHFTGDYDYNRNLSSLSRQEWDELVNNFIHIPGLITREAVRVMAPDGALDQP
                     AKFKDSTGIIVILGPDSPSGKKISGLSRARSEVFRGALRPYTATVNQELSDVLGSKIR
                     LYLILAGNVEGVESDIGNVTTSVLNLISGSSLNKNESIFYIDE"
BASE COUNT          887 a          346 c          431 g          783 t
ORIGIN      
        1 gaatataact gctattacta ctataggagt tactacagca aaactaatca atgaataaaa
       61 aatatatcca aaaggattga gtgtactaat attaaatgta tatgttatag tttttccacc
      121 actatgatag atgtcttgta aatatacata gaaaacatag tttcctggtt ctagaaactt
      181 gtaatcaaat tcatgatgac cattttttac cataatttga ggaattttat caatatcttg
      241 actatttttc attatttcaa tagagattgg gacagctgaa agttctgtac catctgtgct
      301 agatatcctc atcattatct ttgtattttc accagttgtt ggaatctccg ggtcagtagc
      361 aacttgtaca taatattttc ctattttctg tcctgaagaa ttaaaaagtt ggtgtgcata
      421 aatatctttg ataaaagtct ggcatgatga tactaaaaga agatttccta aaataatacc
      481 taaaagaatt gatagatata gcctatttaa ttttctcatt cttctttgct actcctataa
      541 atataatcac aatcctctct taaaggtaac tgaaagatta gcaaaagata tatagtagaa
      601 tagaatctgc caaaataata atggcagaac catctaataa taaatcgtca aacttaaaat
      661 tttcagataa aattgttgtg attacaggta gtggaacggg aattggtcag gctattgcta
      721 aaaaatttgc agaaaaaggt gcaagtatta tcataatggg aagaagaaag gaaccattgg
      781 ataaaacaac tgatattctt atggatatta tgaaaaacgt tggatcatca ggtacagtta
      841 gagctttttc aggagttgat gtttcagatg aaattggcat taatgaaatg ttctcaacta
      901 ttaaacaaga atttggtaaa gttgatatta ttgtaaacaa tgcaggggtc tctggtcctg
      961 taaagacatt tactaatgct tcctttcaag attttaagga ctgtgttgct atacatctta
     1021 ccggaacttt ttggacatct gttcaaggac tcgaagtaat ggaaagaggt tctaaaataa
     1081 taacaattgc tacatttttt actgaagaaa ataaatatga acaaagaccc tatagattca
     1141 gaactcctta tactgctgca caaggagcta aaaatagatt ggctgaagca ttagcatggg
     1201 agttggtaga tcgtggaata aagtctgtag ctaccaatcc aggaccggtg cattctgata
     1261 gaatttataa aactgtttat ccaaaagcag ctgcagaatt tttacgtata ggtggatatc
     1321 ctggtcttga atcgccagag atcgaattag ctgcaacaaa aggactggat cttttagggg
     1381 aaccttccga ggttttttca aaaggtatta tggaaatagc agagcaaata tcaaattccc
     1441 gttcatctgt atcatctaat ggatcttcta cttattctgc caatcaagga gatctaaata
     1501 aaaccattga aggaatgttg ataaaaattc aggaaatagc agaaaaaatc caaaataata
     1561 caagtaaaat gatagtggat aatgaatttt taagtcaaga agaagtagcg gagatggttc
     1621 taaccttgtc agatgatact ataagtaaat taataaatgg tagggttatt cccaatgata
     1681 gagtatttta tcctgttaaa cctattgttg gaacttctat agatgataat aatatacaag
     1741 atttaaaaga aaaggtagta gttattacaa caacttcctc aaaagaaaaa gatgtacaaa
     1801 gagtcattag ccttgcaaac aaactaaatg atattggtgt aaaacaggta ataatcctta
     1861 gtcgaaattc tgatgatatg aagttttata aagattttca tagtcattca ttagaccttt
     1921 tagatgaaga gaaagtaaag agaattttta atactgctaa aacaaaattt ggaaatattg
     1981 atgctattat tcattttaca ggtgattatg attataatcg caatttatcc tctttatcta
     2041 gacaagaatg ggatgagctt gtaaataatt ttatccatat tcctggattg ataactagag
     2101 aagcagtacg agttatggct ccggatggtg cacttgatca accggctaaa tttaaagatt
     2161 ctacaggaat aatagtcatt cttggtcctg attctccttc tggaaagaaa atctctggat
     2221 tgtctagagc aagatctgag gtatttcgag gtgcccttag accctataca gctacagtaa
     2281 accaagaatt atctgatgta ttaggatcaa aaatcagatt atatctaata ctagcaggaa
     2341 atgtcgaagg agttgaatca gatataggaa atgttacaac ttctgtatta aatctgatct
     2401 ctggttcttc attgaataaa aatgaatcaa tcttctatat tgatgaa
//
LOCUS       DATIAS010000156         2757 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1526379, whole genome shotgun sequence.
ACCESSION   DATIAS010000156 DATIAS010000000
VERSION     DATIAS010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1526379"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VLA74_03075"
     CDS             complement(<1..720)
                     /locus_tag="VLA74_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49718.1"
                     /translation="MNTLQSTVDGLQHPNNIRNELLSNYYAAIDTEYFQTNNSKKPFE
                     LVAVAFVNSQGIIKTKHVSDFNRYPKPERALLEWTMTEILKYRLTIGWYSKGVRLQNE
                     ETGTFSGKDSDLKVIDSVCKYYDIPSIISFDKRGIPYVRGYDYHIENDYYLQQNKFNY
                     YYHIDLYNVYKKPLIKSIIYNNSYKDLSLESVAQSILKEGKFENLKGADILNVPKEKL
                     IQYVTQDANLVMKLSTHNNYEI"
     gene            complement(717..>2757)
                     /locus_tag="VLA74_03080"
     CDS             complement(717..>2757)
                     /locus_tag="VLA74_03080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49719.1"
                     /translation="IMQFCLAVKSIQNIHGNTLPFIGIILAKPSSLKTTIIELFRKYD
                     GTFYSDNFTQNSMMSHNSSLSEEELQKVDMLPKMNNKFVLTPELAPIFTAKDDDLQKV
                     LGIITRIVDGKGYESDSGAQGHRKYSDIMFSWVGAAVEIPPKVWKLLSQLGFKLYFFR
                     PNLQEKSVNDLTTIIKDNDYILKNKEIEEALLDYLRVFDAAPTTDFTTLDGNGIVKVK
                     WNFDSSRNDIIEKEQKKVLEYIAQIAKLLAPLRGTVYVSQSKTRKYQKSQNSSNNGPD
                     EEISYQTEELDYEVDSPIIEDPSRAAVVLRNLAIANAISQGRNYFVKEDIKLIIKVAL
                     STTRIHRSKLLELLLKNNGELTTSKIVNELAMSEPSARKTMREFEALGIVKTSRTSAS
                     VNSELKIKMSHEFQWFLSDEFRELCKPSIIEIHPDHSRDSIYCNNNVRYQSFIIKNLC
                     SNYYYNTKSCTDNNNNYCHTLKQNLPPEGEIKNNNDSILITNNNTISKFSNNDLKSLE
                     NKENKINFNHKTYNDSKKVENYTIQEKNDDIINNPNSSEDKGSINENSLQKNSASLGP
                     ENFQHVTASQEKCHIESKINHKDEIPEDVIEDILQVIRDENGSIISLAYALQLACQRS
                     EVVSSYLKDEKLTSRDSRKVRNLFVEINRHPKIEVVKRKPELVVKWIKEEVIINN"
BASE COUNT          809 a          434 c          382 g         1132 t
ORIGIN      
        1 aatttcataa ttattgtgcg tagatagttt cataacaaga ttagcatctt gagtaacata
       61 ttgtattagt ttctcttttg gaacattcag aatgtcagct ccttttaaat tctcaaattt
      121 accttctttt aaaattgatt gagctacact ttcaaggctt agatctttgt agctattatt
      181 gtagattatt gactttatca aaggcttctt gtaaacattg taaaggtcga tatgataata
      241 atagttaaac ttgttttgtt gtaaataata atcattctca atatgataat cataacctct
      301 tacatatggt atacctcttt tatcaaaaga tattattgaa ggaatatcat aatacttgca
      361 gactgaatca atgactttta aatcagaatc ttttcctgaa aatgtcccag tttcctcatt
      421 ttgtagtctt actcccttac tataccaacc gattgttagt ctatacttca atatttcagt
      481 cattgtccac tctaaaagtg ctcgttccgg ttttggatat ctattgaagt cagaaacatg
      541 ttttgtcttt attattcctt gactattgac aaaggccact gctacaagtt cgaatggttt
      601 ctttgaatta ttagtttgaa aatattcagt atcaatcgcc gcataataat tacttaatag
      661 ttcatttctt atattgtttg gatgttgtaa cccatcaacg gtgctttgta aagtattcaa
      721 ttgttgatga tcacctcttc tttaatccat tttacaacaa gttcaggttt tctctttact
      781 acttctatct ttggatgcct attgatttct acaaatagat ttctaacctt tctactatct
      841 cttgaagtta atttctcatc ttttaaatag ctacttacta cttcacttct ttgacatgct
      901 aactgcaaag catatgctaa agatattatt gatccatttt catctcttat tacttgtaga
      961 atatcttcaa ttacatcttc tggaatctca tctttatgat taatctttga ttcaatgtga
     1021 cacttttctt gtgacgctgt cacatgctga aaattttctg gacccagaga ggcactattt
     1081 ttttgtaaag aattttcatt tattgagcct ttatcttcag atgaattagg attattaata
     1141 atatcatcat ttttttcttg tattgtgtaa ttttctacct tcttgctatc attataagtt
     1201 ttatggttaa agtttatttt attttcttta ttctctaaag attttagatc attgtttgag
     1261 aatttgctga ttgtattgtt atttgtaatt aatatactat cattattatt ttttatctct
     1321 ccctctggag gtaaattttg tttcagcgtg tgacaataat tgttattgtt atcagtacat
     1381 gatttagtat tataataata attgctgcaa agatttttga taataaagga ttgatatcta
     1441 acattgttat tgcaatagat tgagtctcta ctatgatcag gatggatttc gattattgat
     1501 ggtttgcata gttctctaaa ctcatcggac aagaaccatt gaaattcatg actcattttg
     1561 atctttagtt ctgaattaac actagcagaa gttcttgatg tctttactat tcctaatgct
     1621 tcaaattctc tcatagtttt tcttgcagat ggttctgaca ttgcaagttc atttactatt
     1681 tttgaagttg ttaattcacc attatttttc aacaaaagtt ctaatagttt tgatctatga
     1741 attctagttg tagataaagc aacttttata attaatttaa tatcttcttt aacaaaataa
     1801 tttctacctt gtgaaattgc atttgcaata gctaaatttc tcaatactac tgctgctctt
     1861 gaaggatctt ctattatagg agagtctact tcataatcta attcttctgt ttgatatgag
     1921 atctcctcgt ctggtccatt atttgatgaa ttttgagatt tttgatactt acgtgtttta
     1981 gattgtgaaa cataaacagt acctctaaga ggagctaaaa gtttggcaat ttgagcaata
     2041 tattctaaga cttttttctg ttccttttca atgatgtcat ttcttgatga atcaaaattc
     2101 cattttacct tcactatccc atttccatct aaagttgtaa agtcggtagt tggggcagca
     2161 tcaaaaactc tgagataatc taatagagct tcttcaattt ccttgttttt taaaatgtag
     2221 tcattgtctt tgataattgt tgttaaatca tttaccgatt tttcttgtag atttggtcta
     2281 aagaaataga gtttaaatcc taattgcgat aacaacttcc atactttggg tggaatttct
     2341 acagcagctc caacccagct aaacattata tcagagtatt ttctatgtcc ttgtgcaccg
     2401 gaatcactct cataaccttt accgtcaact atccttgtta ttatccctaa cactttttgt
     2461 aaatcatcat ctttagctgt aaatattgga gctagttctg gtgtaagaac aaatttatta
     2521 ttcatctttg gaagcatatc aactttttgt aattcttctt cagacaatga ggaattgtgt
     2581 gacatcatag aattttgagt aaagttatca gaatagaacg ttccatcata ttttctaaat
     2641 aattctataa ttgtggtttt taaggaagat ggttttgcta aaataattcc tataaatggt
     2701 aatgtattac catggatgtt ttgaatagat ttaacagcta gacaaaactg cattatg
//
LOCUS       DATIAS010000157         2041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1254636, whole genome shotgun sequence.
ACCESSION   DATIAS010000157 DATIAS010000000
VERSION     DATIAS010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1254636"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..424)
                     /locus_tag="VLA74_03085"
     CDS             complement(143..424)
                     /locus_tag="VLA74_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heme transporter CcmC"
                     /protein_id="HSF49720.1"
                     /translation="MRLQSKYWLLMAFLPLFTILYVGFFGQALAQETPEGYIQRNAEV
                     WGLFYDLMVAAFIVGTIVSATIVYICWRYRESHKKNRFVEETTEEDVDR"
     gene            complement(522..1127)
                     /locus_tag="VLA74_03090"
     CDS             complement(522..1127)
                     /locus_tag="VLA74_03090"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSF49721.1"
                     /translation="MRHGQADNNVNRVLVGRHLESHLTEKGQMQVKETAQLLKNMSIS
                     KIYSSPVTRAIETTQIVGEELGLDYEIDDRLYEIDLGKLAGTNYDEVLNKYGNLFLSF
                     YMGDDSVLSNHGVESFTAVKSRVRDLLDQVMVKHDNHNVLLVTHLDPIKAAISYILDL
                     KPESLYKWHMRNAALTILKQEFKTWSISAVNFMGAKRYLYE"
     gene            1834..>2041
                     /locus_tag="VLA74_03095"
     CDS             1834..>2041
                     /locus_tag="VLA74_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSF49722.1"
                     /translation="MKIGIVGGTGGMGEGFALRWCANHQIVIGSRDKNKATEVANNYM
                     KIAQDFYKDKMNGNISGDNNFDLAR"
BASE COUNT          676 a          360 c          316 g          689 t
ORIGIN      
        1 tgttgtccca taaccttaat ggtttcagca tcagctggaa cttcttctat tattctttct
       61 acatcccaag acgctgcacc tacccagatt aaaattgcaa ctacagagcc tatgtaaacc
      121 cactcataca tagcatgtgc cattagcggt caacatcctc ctccgttgtt tcttcaacga
      181 atctattctt tttgtgagat tctctatatc tccaacatat atacacaatg gtagccgata
      241 ctattgtacc gacaataaat gcggccacca tcaggtcata aaataggccc catacctctg
      301 catttcgttg tatatatccc tctggagttt cctgagctaa agcttgccca aaaaagccaa
      361 cataaagtat agtgaagagg ggtaaaaaag ccattaataa ccaatattta gattgcaatc
      421 tcattactcc ctttttattg ttggtgatta cccgatacca tctaatttaa ggtttttgaa
      481 tttattataa taaatttaat ttaatttaat taccgttact attattcata gagatatctt
      541 tttgcaccca taaaattaac tgcagagata gaccaagttt taaattcttg tttcaagatt
      601 gttaatgcag cattacgcat atgccattta tagagagatt caggtttcaa atctagaata
      661 taagaaattg ctgcctttat aggatcgaga tgagtaacta gtagtacatt gtgattatca
      721 tgtttgacca taacttgatc cagtaaatcc cttactcgag attttactgc ggtaaaagat
      781 tcgactccat gattagaaag aacagagtcg tctcccatat aaaagctcag aaacaaattt
      841 ccatacttgt ttaatacttc atcataattt gttcctgcta attttcccaa atctatttca
      901 taaagtcgat catctatttc ataatcaaga cctaactctt ctccgacgat ctgtgttgtt
      961 tcaattgccc tggtgacagg actagaatat attttagaaa ttgacatatt ttttaataat
     1021 tgggcagtct ctttaacttg catttgtcct ttttctgtta gatgcgattc tagatgtcgt
     1081 ccaacaagga ctctgttaac gttattatca gcttgcccgt gcctcatgaa aatagctaga
     1141 ttcaacttag tatatactat aattttatca tcaataattt atattaattg aagaaaaaat
     1201 gtcgaatttt aaagaaatcc atatcttgaa ataaaaaatt ggattctgtt aaatctttgg
     1261 gtattccatt tgggtcttta tccttaggtg ttgataatta ggtgttgata atttacgaga
     1321 catcatcttt cacaatcaaa tgtctaataa atggactcaa taggttggat gttcatttgt
     1381 ataaagatag cagttcttgg tttagtcggt gctcgatatt tcgaatacaa ggcaacatta
     1441 gaagaacata actatagatg taattaaaat gtaaaaggta accgtgagtt accttttaca
     1501 ttacataatg cagtacaaac tcccaaattt tttttttggt agcaataata cattaatctt
     1561 cttaaaatcc tttgtggtat ttagatgagt ttaccatcca aaaatcaaca atcttttatt
     1621 ctaccttctc ttgttatgat acacctaaat caaatcaaca ttgagcatcg tatctttgtg
     1681 ggtgttagtt ggtcgtataa cacccacttt tcaacaccca tttacaacac ccaaagattc
     1741 aacagaatca aaaattgtta ttataagcaa tacataaaga atatgaaaca atatatttaa
     1801 aacatatagc gagaaaaatt agctgtttca aaaatgaaaa taggaatcgt tggtggaacc
     1861 ggtggaatgg gtgagggttt tgctttgaga tggtgtgcaa atcatcagat agttataggt
     1921 tctagagata aaaataaggc aacagaagtg gctaacaact acatgaaaat cgcacaagat
     1981 ttttataaag ataagatgaa tggcaatatt tctggcgata acaattttga ccttgccaga
     2041 g
//
LOCUS       DATIAS010000158         3685 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_846701, whole genome shotgun sequence.
ACCESSION   DATIAS010000158 DATIAS010000000
VERSION     DATIAS010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846701"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1127)
                     /locus_tag="VLA74_03100"
     CDS             complement(<1..1127)
                     /locus_tag="VLA74_03100"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSF49723.1"
                     /translation="MRSYDVAIVGGGPAGLSAAYSASKNGATVILFERDKSIAHNIRT
                     SGVSWIDSMKKLEIPEKLYNPIKNYRFVSPNNDILIKGFDYRSCVIDVRGLYQYLAFL
                     AANSGSEIWINSNVTHVSVPNDKRGMNALTVNTPKGTIEFKCKLIIDASGFNGFVSRK
                     LGDFSGWKRFGIGAEYECYCENLDPETWSLMVGKQYSPAGYAWAFPLSRNRIRIGVGI
                     GRPESTQEPLKLLNQMIENKLKPLNELGWIEPVEFHYGYIPNQGTRDCTVYDRVLLVG
                     DSAGQSNPLVLEGIRHAIEFGRLAGKIGSESLVQEDPFKYLIKYEKEWRKLIGTKIQS
                     ALKVQSRWINLSDDQWDEELDILKEMSMDEFLDFIKADFTTA"
     gene            1221..1742
                     /gene="bcp"
                     /locus_tag="VLA74_03105"
     CDS             1221..1742
                     /gene="bcp"
                     /locus_tag="VLA74_03105"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HSF49724.1"
                     /translation="MYIRLSKYKMQRDELDKKDLPKEGDAAPNFRFKDKKGAEMVLSD
                     LQGKQVVVYFYPRDFTPGCTIEADEFAQDYEKYKERNIEIIGISPDDEGSHKKFREKM
                     NIPFFLASDINNEISNSYGVYVLKKFMGKEYMGISRTTFIIDEKGIIRKIFRNVKPRG
                     HGLDVLKYFPHHK"
     gene            complement(1797..2339)
                     /locus_tag="VLA74_03110"
     CDS             complement(1797..2339)
                     /locus_tag="VLA74_03110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49725.1"
                     /translation="MDLTSLILDNCLYKYDIKNCYKLIINDGIASDFFLVGKYANIFD
                     AIEFHTVSLRKTIPCIGESISIIKNFDYYQDLICKTIPNLADKNPFKIILQKLRILII
                     GAFSKLSRLICCLDKNGIEQWNKFSGSLLEIVSTTIVSYRSNNRVENHQSELDKATSL
                     FIFLGLDLERIDDELRDLYL"
     gene            complement(2352..2783)
                     /locus_tag="VLA74_03115"
     CDS             complement(2352..2783)
                     /locus_tag="VLA74_03115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49726.1"
                     /translation="MLTSRVDFERKQRLYELLKKQHEAEKHEILHYSSILKDIENNLI
                     RNYFNTLLNDGIKHIQYITEAMSKIEGASGSMHLTQDGIDESIEEELQSRNILSECVD
                     LAEDQEIKELIKSVVVDEEHHIQILKHVRQLIETYSKRQAK"
     gene            complement(3023..3107)
                     /locus_tag="VLA74_03120"
     tRNA            complement(3023..3107)
                     /locus_tag="VLA74_03120"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3069..3071),aa:Leu,seq:gag)
     gene            3208..3441
                     /locus_tag="VLA74_03125"
     CDS             3208..3441
                     /locus_tag="VLA74_03125"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF003089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit N"
                     /protein_id="HSF49727.1"
                     /translation="MLIPVRCFTCGNLVADKYAEYKERVKAGEEDAKILDLLGIHRYC
                     CRRMLISSVETIYQVIPYYEVLRRRLTEMQSDV"
     gene            3457..>3685
                     /locus_tag="VLA74_03130"
     CDS             3457..>3685
                     /locus_tag="VLA74_03130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase"
                     /protein_id="HSF49728.1"
                     /translation="MPNITDIRGRIVFNSRGSKSIEVDVVSNDKFIGRACAPSGASVG
                     KYEAISFKENSPEKSLEELNNNLSKFIGIESQ"
BASE COUNT         1254 a          627 c          586 g         1218 t
ORIGIN      
        1 gctgtagtaa aatcagcttt aataaagtcg agaaattcat ccattgacat ttctttcaat
       61 atatccaatt cttcatccca ttgatcatca gataaattaa tccatctgga ttgaactttt
      121 aaggctgatt gtatcttcgt acctattaat tttctccatt ctttttcata tttaattaaa
      181 tatttgaacg gatcctcttg aactagtgat tcagagccta tttttcctgc taaacgtcca
      241 aattctatag catgtctaat cccttcaagt acgagtggat tcgactgtcc agctgaatct
      301 ccgactaata atactctatc ataaactgta caatctcgtg tcccttgatt gggaatataa
      361 ccataatgaa attcaacggg ctcaatccag cctaattcgt taagaggctt gagtttattt
      421 tcaatcatct gatttaataa ctttaatggt tcttgtgtcg attcaggtct tcctattcct
      481 acaccgattc ttatcctatt tctagaaagc ggaaatgccc aagcgtaacc agcaggtgaa
      541 tattgctttc cgaccatcag actccatgtt tccggatcca aattttcaca gtaacattcg
      601 tattctgcac caatcccaaa tctcttccat cctgaaaaat caccaagttt tctactaaca
      661 aagccgttga aaccactcgc atcaattatc aacttacatt taaattcgat tgttcccttt
      721 ggagtattta cagtcagagc gttcattccc cgtttgtcat taggaacaga tacgtgagtt
      781 acattactat ttatccagat ttcagaacca gaattagctg caagaaatgc taaatattga
      841 taaagacctc taacgtctat gacacatgat ctataatcaa atcctttaat tagaatatca
      901 ttatttggag atacaaaacg ataatttttt atcgggttat ataatttctc aggaatttca
      961 agtttcttca tagagtcgat ccatgaaact ccactggttc taatgttatg agctatggat
     1021 ttatcccttt caaaaagaat tacagttgct ccgtttttag aagcactata agcagctgaa
     1081 agaccagcag gaccgcctcc aactatggca acatcataag aacgcatttc tataatatta
     1141 acaataaatt tgaattaaat aaaaattcat atgataataa acaataatca agttttagca
     1201 atttacgtaa aaggcttttt atgtatatta gacttagcaa atataagatg caacgagatg
     1261 aattagataa aaaggactta ccaaaagaag gagacgcagc tcctaatttc agatttaaag
     1321 ataaaaaagg agcagaaatg gtactttctg atcttcaagg taagcaagta gttgtctatt
     1381 tttatccacg agattttact cctggatgca ctattgaagc agacgaattt gcacaggatt
     1441 atgaaaaata taaggaaaga aatatagaaa taattggaat tagtccagac gatgaaggat
     1501 ctcataagaa atttagagag aaaatgaata ttcctttttt tttagcatct gacatcaata
     1561 atgaaatatc aaattcctat ggagtttacg tgctaaaaaa atttatggga aaagagtata
     1621 tgggtataag tagaacgaca ttcataatag acgaaaaagg aattataaga aaaatcttcc
     1681 gaaacgtaaa accgagagga cacggtcttg atgttttgaa atattttccc catcataaat
     1741 aatatataag aataattaag aaatacttcc cttccaaaat ctaatatcat ataatttcat
     1801 agataaagat ccctcaattc atcgtcaatt ctctcaaggt ccaacccaag gaatatgaac
     1861 aaagacgtag ctttatccaa ttcgctctga tgattttcga cccgattatt tgagcgatat
     1921 gaaactatgg tagtggaaac tatctccaat agagatcccg agaatttatt ccattgctca
     1981 attccatttt tatctaagca gcagattagt ctagataact ttgaaaatgc tcctattatt
     2041 aaaattctga gtttttgtag aataatttta aacggattct tatcagcgag gttgggtata
     2101 gttttacaaa tcaaatcttg ataataatca aagttcttga taatacttat ggattcacca
     2161 atacaaggga tagttttcct caacgaaaca gtatgaaact caattgcatc aaaaatattt
     2221 gcatacttgc caaccaaaaa aaaatcagag gctattccgt cattaataat taatttgtaa
     2281 caatttttta tgtcatattt atataaacaa ttgtctagta ttaacgatgt tagatccatt
     2341 ctgaaggcta cttattttgc ttgtctctta gaataagttt ctattagctg tcttacatgt
     2401 tttaatatct gtatatgatg ttcctcatcg acaactacac tcttgataag ttcttttatt
     2461 tcctgatctt cagctagatc gacgcattct gacaatatgt ttctggattg aagttcttct
     2521 tctattgact catcaatccc atcttgggtc aaatgcatac ttccagaagc gccttctatt
     2581 tttgacattg cctcggtaat atattgaata tgtttaatcc catcatttaa taacgtattg
     2641 aagtaatttc taataaggtt gttctcgatg tccttgagaa ttgaactgta gtgcaagatt
     2701 tcatgttttt cagcttcatg ttgttttttc agtaattcgt aaagtctctg tttcctttca
     2761 aaatctacac gactcgtcaa cattttcttt atccagctcg ctaataaaaa agtgacgttt
     2821 tttattttct aattaaattc ttgagaacat tataattaca tatcaaatat ttaattctgt
     2881 gtcaggagaa aatattattt gccaatgtac atgtcatacc aaatacggcg ttaaatcatt
     2941 ctgcaggaaa tgtttagaaa aacacaagac ctctccatat tataacataa tgaaaaaatt
     3001 cgattagaat attttttgtt aatgcgggag atgggatttg aacccacgaa cccctgaggg
     3061 ataagagcct cagtcttacg cctttgacca ggctgggcga cccccgcaca gtgacaagac
     3121 gtgaaatcat ctaatttgaa tattaccatt aactaaagta atatctgaaa ataatagttt
     3181 ttatataatt tcgtttttca ataaattgtg ttaattccag ttagatgttt tacgtgtgga
     3241 aatttggttg ccgataaata tgctgaatat aaggaacgag tgaaagctgg agaagaagat
     3301 gccaagatct tggatttatt gggtatccac agatattgtt gtcgaaggat gcttatttcc
     3361 agcgtggaaa caatttacca agttattcca tactatgagg ttctaagaag aagattgaca
     3421 gaaatgcagt cagatgtgta aatttgatga tagaatatgc caaatattac agacatcaga
     3481 ggaagaattg tttttaatag cagaggaagt aaaagcatag aagtcgatgt tgtttcaaat
     3541 gacaaattca taggaagggc ctgtgcaccg tcaggtgcta gtgttggaaa atacgaagca
     3601 ataagtttta aggaaaatag tccagaaaaa tcattagaag aattaaataa taatttgtcg
     3661 aagtttatag gaattgaatc tcaag
//
LOCUS       DATIAS010000159         3795 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1392101, whole genome shotgun sequence.
ACCESSION   DATIAS010000159 DATIAS010000000
VERSION     DATIAS010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392101"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1262)
                     /locus_tag="VLA74_03135"
     CDS             complement(162..1262)
                     /locus_tag="VLA74_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--phosphoribosylaminoimidazolecarboxamide
                     ligase family protein"
                     /protein_id="HSF49729.1"
                     /translation="MIDRNRIIDIVGNYDHKKIKIGVLGSHSALEIMDGATDESMKTV
                     CICQKGRETPYLRFKRISNDIVILDKFADILDEEIQKKLRDLNVIMVAHRAFSVYLGY
                     DNIEGNFLIPIFGNRNLLRAEERTYPKNQYYLLNKSNIKHPKIYRDPAEISGLSIVKV
                     QEAKRKLERAFYFVHSYDDYIEKTENKIKNGLIDKNDVESAIIEEYIIGTYFNFNFFY
                     SPLNNDTEFLGIERRLQTNLHDFTSSLTAKQQLELDIELQNIEIGHTPASIRESMLEK
                     VFDLGDKFSRTLKEQYPPGLIGPFSLQSVVTKDLDIYVYDVSFRVPGNPILATTSPYT
                     KYYYGFSMGVGRRVAMEIKHAILENRISEIVT"
     gene            complement(1332..1655)
                     /locus_tag="VLA74_03140"
     CDS             complement(1332..1655)
                     /locus_tag="VLA74_03140"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSF49730.1"
                     /translation="MVIADNFLMQIPFGVEWIIIIIIIVVLFFGVKKIPELAKSFGKA
                     TAEFEKAKLEAKRELEKYKNENPNVGREKLESIAETLGIDYTNKNDEELKQAIEKEIN
                     KNKTT"
     gene            1802..2119
                     /locus_tag="VLA74_03145"
     CDS             1802..2119
                     /locus_tag="VLA74_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49731.1"
                     /translation="MQYHKAAHLGQERSRKAQMKLFEYTGFSMLTYTIKTGPSSFEPV
                     GEEMLVGELNNGEEIVIFICDSEGFAKAQSKPMSLKEGEEIIKKMIYDGIHPYKGEIK
                     TVS"
     gene            complement(2122..2793)
                     /gene="pyrH"
                     /locus_tag="VLA74_03150"
     CDS             complement(2122..2793)
                     /gene="pyrH"
                     /locus_tag="VLA74_03150"
                     /inference="COORDINATES: protein motif:HMM:TIGR02076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HSF49732.1"
                     /translation="MIKLSGSVFHNDNNRNQIEVLKKYSSMLIDISNTVQPVVVTGGG
                     QIARFYINTARKLGLDESSLDLMGIDVSRLNAKLLISSLGSHVYPNVPKSLDDISNFM
                     ESNKIIISGGLHPGQSTNATSALIAEKIKANQFINATDVEGIYDSDPRKNQNAKLYEK
                     IDLRSCLNMLLDSSSMAGEYDLMDIVALKVIERSKIKTRVILSSPENIKNTVEGKILG
                     TELII"
     gene            complement(2836..>3795)
                     /locus_tag="VLA74_03155"
     CDS             complement(2836..>3795)
                     /locus_tag="VLA74_03155"
                     /inference="COORDINATES: protein motif:HMM:NF039904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49733.1"
                     /translation="LHDIGHGPFSHLFEEVLIGRGISTSSHENMGKKIIRKTIIKDIL
                     EKYGYDSDSICNLSFGESPIMFYNEIIAGGLSSDIMDYLPRDSFFTGVEYGKIDYYRL
                     ISSFEVLSNGHLGINKSAINSLESMLISRFQMFKAVYFHKTVRSAEVMLLHSLLLADR
                     QLNFSDLSVDEYIEYTDDKTIDIILSLKNNDRAVKLAKDYKNRILLKCVYEKFLQNKG
                     TSNSIKLTKRQKDVFKRIINSLKIENDFVFIDISRAPSMPLTPSKEELNSIMLVDKDS
                     EFETRTSEIPLIDSITGFLDMIRIYTTQANREKLEKALKNIDI"
BASE COUNT         1230 a          642 c          528 g         1395 t
ORIGIN      
        1 ataacaacaa ttcgtataag cgattctatt tttaatttgc aatcgccgca gagcgcttgt
       61 gaaataccca cctattcggt tgcaaaattg aaagatacaa tagaaataat tgacggcata
      121 tttaaaaagt tatagcctac caatttagaa actcaaaaag attatgtaac tatttcagag
      181 attctatttt ctagaatagc atgttttatc tccattgcaa ccctccgtcc tacacccatc
      241 gagaagccgt aataatattt agtgtatgga cttgttgttg ctaatatcgg atttcctgga
      301 actcgaaatg aaacatcata aacatatata tccagatctt tggtaacaac actttgtaag
      361 gagaaaggtc caattaaacc tggaggatat tgttctttta aggtccgtga aaatttatct
      421 cctaaatcaa ataccttttc tagcatagac tcacgtatgc tggctggtgt atgccctatc
      481 tctatatttt gtaattcgat gtccaattcc aattgttgtt tagcagttaa tgatgaagtg
      541 aaatcatgta aattggtttg taatcttctt tcgattccca aaaattctgt atcgttattc
      601 agaggcgaat agaaaaaatt aaaattgaaa tatgttccta taatatattc ttcaattatt
      661 gcagattcaa catcattttt atcgattaat ccatttttta tcttgttttc tgttttttct
      721 atataatcgt cataagagtg tacaaaataa aatgctcgct ccaattttct ctttgcttct
      781 tgaactttta caatagatag acctgagatc tctgcaggat ctcgatatat ctttggatgt
      841 ttaatattag atttatttag taaatagtat tggttttttg gatatgttct ttcttcagcc
      901 ctcaaaagat ttcgattgcc aaaaatagga attaaaaaat taccttcaat gttatcgtat
      961 cccaaataga ctgagaatgc tctatgagct accattatga cattcaaatc tcgtaatttt
     1021 ttctgaattt cttcatcaag tatatctgcg aatttatcta atatcacaat atcattggat
     1081 attcttttaa atctcaaata gggtgtctct cttccttttt gacatataca aaccgttttc
     1141 attgattcat cagttgcacc atccataatt tctaatgcag aatgacttcc aagaacacct
     1201 atctttatct ttttgtgatc ataatttcct acaatatcta ttatcctatt tcgatcaatc
     1261 attatgatga aaaattatta gttttagtgc aataaaatgt ttttttaaaa ataataattt
     1321 aattaaaata attaggttgt cttattctta ttaatttcct tctcaatagc ttgtttcaat
     1381 tcctcgtcat ttttattggt ataatctatt cccagtgttt ctgctattga ttcaagcttt
     1441 tctctaccaa cattcggatt ttcgttttta tacttttcca gctctctttt tgcttctaac
     1501 ttggctttct cgaattcagc tgtggctttc ccaaaagatt ttgctaattc aggaattttt
     1561 ttaactccaa agaacaaaac gactattatt attattataa ttatccattc aacaccaaat
     1621 ggaatctgca ttaaaaaatt atctgcaatt accataattt tttcattata gtgtaatatg
     1681 aataataatt taagtgttaa atttgaattg atgactattt taatgatatt tcgattattt
     1741 tataaaaaaa cataacctaa tcaaaaaata agtataaaat ccagaataaa caataaacat
     1801 catgcaatat cataaagcag ctcatctggg gcaagaaagg tcaagaaagg cccaaatgaa
     1861 attgtttgaa tatactggtt tttccatgct tacatatacc ataaagactg gaccatcgtc
     1921 atttgagcca gtaggggaag agatgttagt gggagaattg aataatggag aagaaattgt
     1981 cattttcata tgtgatagcg aaggattcgc aaaagcacag tctaaaccaa tgagtctcaa
     2041 agaaggagaa gaaattataa agaaaatgat ttatgatggc atacatccat acaaaggaga
     2101 aataaagact gtatcttaaa attatattat tagttcggtt cccaagattt ttccttcaac
     2161 agtatttttg atattttctg gtgaggaaag aatcactcta gttttaattt tagatctttc
     2221 gatcaccttt agagctacaa tgtccatcaa atcatattcg ccagccatcg aactactatc
     2281 taatagcata ttcagacaac ttcttaaatc gattttctca taaagtttcg cattttgatt
     2341 tttccttggg tccgaatcat aaattccttc aacatctgtc gcattaatga actggtttgc
     2401 ttttattttt tcagctataa gagcagatgt tgcgttagta ctttgaccag gatgcaatcc
     2461 ccctgagatt attattttat tactttccat aaaattgctt atatcatcta atgatttcgg
     2521 aacatttgga taaacatggc ttcccaatga tgaaatcagt aatttagcat tcaatcggga
     2581 tacatctatg cccattaggt caagactgga ttcatctaga cctaatttcc tggctgtatt
     2641 aatataaaac cttgcaattt gtccaccgcc agtaactacc actggttgaa cagtattact
     2701 aatatcaata agcatggaac tatatttttt tagaacttca atttggtttc gattgttatc
     2761 attgtgaaat acgcttccac ttaattttat cacaactcgg tttctcgggt aaatattcat
     2821 tgttccttcc atatatcata tatcaatatt ttttaaagcc ttttctagtt tttccctatt
     2881 agcctgtgtg gtgtatatcc taatcatgtc tagaaatcca gttattgaat ctattaatgg
     2941 aatttcagat gtacgggttt caaactccga atctttatct actaacatta ttgaattaag
     3001 ttcttctttt gacggtgtca aaggcatgga tggcgccctg gagatatcta taaagacgaa
     3061 atcattttca attttcagtg aatttattat tctcttaaaa acatcttttt gtcttttcgt
     3121 taattttata ctattcgatg tacctttatt ttgaagaaat ttttcataaa cacattttaa
     3181 taatattcta tttttataat ccttagctaa ttttacagca cgatcgttat tttttagaga
     3241 gagtatgata tcaatcgttt tatcatcagt gtattcaata tattcatcca cagataaatc
     3301 agaaaaattt agttgtctat ctgcaagtaa aagtgaatga agtaacataa cttctgcaga
     3361 tctaaccgtt ttatgaaaat aaactgcctt aaacatctga aatctagaaa ttaacatgga
     3421 ttcgagggaa tttatggcag atttatttat cccgagatga ccattagata aaacctcaaa
     3481 ggagcttatt agcctataat agtcaatttt accgtattct acccccgtaa aaaagctgtc
     3541 tctaggcaag taatccatta tatcagacga aagtccacca gctattatct cattataaaa
     3601 cataatcgga gattctccaa aagatagatt acatatagaa tcagaatcat atccatattt
     3661 ttccaatata tctttgatta ttgtttttct tatgattttt tttcccatat tttcatggct
     3721 actagttgag atacccctac cgattaaaac ttcttcaaag agatgggaaa agggtccatg
     3781 accaatgtca tgaag
//
LOCUS       DATIAS010000160         4257 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1254894, whole genome shotgun sequence.
ACCESSION   DATIAS010000160 DATIAS010000000
VERSION     DATIAS010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4257
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1254894"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VLA74_03160"
     CDS             complement(<1..537)
                     /locus_tag="VLA74_03160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49734.1"
                     /translation="MKYLLTFGILVMSIFFLMSSSMINAQMDTNMNNMTNTNTTKDLS
                     VSIGELLLVLKGKGEGMRLTNIDKPELEVSWSGNGTLNRNIPIMDFGTAWSTTLKDDG
                     HMYTKGHGILVTFDNEIAKYTFNGIGKFDDDGKLRNLGSVNFDTTDTGALSVLNNIVG
                     VYADEIDQNGNSITNIWKL"
     gene            complement(660..791)
                     /locus_tag="VLA74_03165"
     CDS             complement(660..791)
                     /locus_tag="VLA74_03165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49735.1"
                     /translation="MNYKIVSKSAVDYSQILTISGFIYMYFAIVKKEGETSKNSAKT"
     gene            1122..1436
                     /locus_tag="VLA74_03170"
     CDS             1122..1436
                     /locus_tag="VLA74_03170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49736.1"
                     /translation="MSYGYEIDAGENQGISNRQLALIFGISIVGIFIVFALFITPIQN
                     LFPESITEQVTIISKSDGECVVDSKDHPRAISNCNYDIGDKLQITYKYGTAPIETYKK
                     IN"
     gene            complement(1686..1814)
                     /locus_tag="VLA74_03175"
     CDS             complement(1686..1814)
                     /locus_tag="VLA74_03175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49737.1"
                     /translation="MQIELIFPIFERKCTKAEEITNINGIQKKEVLEEPLIANKQL"
     gene            complement(1845..3455)
                     /locus_tag="VLA74_03180"
     CDS             complement(1845..3455)
                     /locus_tag="VLA74_03180"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSF49738.1"
                     /translation="MFLTYQLISKKLIIIPFVLVVIFCGWIPLAANASSTISPSLRSI
                     SLTNNTNTSNNTTTTATPIQHLIIIFQENVSFDHYFGTYPNAENLDSEIPFYASANTP
                     SIDGLTKSLLYNNTNLNDPFRMSKNDSKTVASCDNNHAYTAIQKSYNRGFMDKFVESS
                     GIVIEGCNPSQVMGYFDGNTVTALWNYAQHFAINDNFHSTITGPSLPGHINLISGQTH
                     GAIPSNIENGVANGTLIGDNDTFFDDCSNGTKIYMTGKNIGGLLNNKEITWGWFSGGF
                     KPTSRTDDGKAVCGSSHVNIIGNNITDYVVHHEPFQYYRSTANPTHLPPTSTSMIGKT
                     DQANHQYDLSDFWAAVESNNIPAVSFLKAPYYQTGHAKASDPTNEQTFLVNTINKLQN
                     ISKWNNTAIIIAYDDTGGWYDHVMPPIVMQSNDPKYDAIGGPDGLCGLISKYSKYQDR
                     CGYGGRLPIVIISPWAKVNYVNHQLTDQTSILRFIEDNWNLGRIGDNSFDEKAGSILN
                     MFNFTKGHYAEKLFLNSNNGTIVNKYSK"
     gene            complement(3556..3858)
                     /locus_tag="VLA74_03185"
     CDS             complement(3556..3858)
                     /locus_tag="VLA74_03185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49739.1"
                     /translation="MIIKQKLSITMIILFSVSMLMTSTVYAAIEKVEKYAEDICIQTY
                     KGDWDGKDCDIQEAEDEQKYYDDIASLEDSICEEVVKDVSPEDLIDLCKNLNVFEK"
     gene            complement(3883..4041)
                     /locus_tag="VLA74_03190"
     CDS             complement(3883..4041)
                     /locus_tag="VLA74_03190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49740.1"
                     /translation="MFQKEIIKTKEIVAITAHNYLKYIAFKRYKDKVSEKQFSNKIQY
                     YNYILKKG"
BASE COUNT         1417 a          619 c          586 g         1635 t
ORIGIN      
        1 tagtttccat atgttggtta ttgaatttcc attctggtct atttcatctg catatactcc
       61 aactatatta tttagtacag atagtgctcc agtatcagta gtatcaaaat ttacagatcc
      121 caagtttctt aattttccat cgtcatcaaa ttttccaatc ccattaaaag tatattttgc
      181 tatctcatta tcaaatgtta cgagtattcc atgaccttta gtgtacatat ggccatcatc
      241 ctttaaagta gtagaccaag cagttccaaa atccattata ggaatatttc tatttagtgt
      301 cccattacct gaccaagata cttctagttc tggtttatca atatttgtta atctcattcc
      361 ttcacctttt cctttcaata ctaatagtaa ttcacctata cttacagaaa gatctttagt
      421 ggtgtttgta tttgtcatgt tattcatatt agtatccatt tgtgcattaa tcatacttga
      481 tgacatcaaa aaaaatattg acataaccag tattccaaac gttaatagat atttcatatc
      541 taattattta tatataaaat tctagactaa aaatatttat taaaattaat aaaatcaaaa
      601 aatattatca aagagtttaa tgttactttg ctaatttctt ctactttttt agaaccattt
      661 caagtttttg cagaattttt agatgtctct ccttccttct ttactattgc aaaatacatg
      721 tatatgaacc ccgatatagt aaggatctga gaatagtcaa ctgctgattt tgacacaatt
      781 ttgtagttca aaaaagatta ttctataatt gtaaagtcct ctttttatta taattagttg
      841 gctatatact acagagattc aatttaattg atatttgttt atatataaaa tattcgcttc
      901 aacttttgaa aacaaaaaat tctattatag tataattaat ttaaaattta gttatatgga
      961 ttactattat actatagcca tgatgtgaaa ttacttttaa tgatcctttt attttagtta
     1021 atcttctttt tttatattta ttaactatag tactttattt tcttagacac tatctattaa
     1081 tgtataatat actttatagg ataattacaa taaatactat tatgagttat ggatatgaga
     1141 tagatgctgg agaaaatcaa ggtatctcaa acagacaact agcgttgata tttggaatta
     1201 gtatagtagg aatttttata gtatttgctt tgtttattac tccaatacaa aatctattcc
     1261 cagaatcaat taccgaacaa gttacaataa ttagtaaaag tgatggggaa tgtgttgttg
     1321 acagtaaaga tcatcctaga gcaatttcaa actgtaatta tgatataggt gataaattgc
     1381 agattacata caaatatgga actgctccaa tcgaaaccta caagaaaata aattaaaatt
     1441 ccttctatat actaattttt caatattttt gcaataatca ctataataga taatgtctaa
     1501 cttttttatt agatgatgct agatgggcta ggagatgtat caactgattt tgacacaatt
     1561 ttgtagttct acaaagaaaa aataagatta ataaaaaatt tttttcaatt agtaatagtc
     1621 tattagataa atattggagc ggctgatgct ttaacgcaat gaaataatca tgattatgag
     1681 tatattcata attgtttatt tgctatcaat ggttcttcca atacttcttt tttttgtatt
     1741 ccattaatat tagtaatctc ttctgctttt gtacattttc tctcaaatat tggaaatatt
     1801 aattctattt gcattataga tattaaatta tattggattt ggatttattt tgaatattta
     1861 tttacaattg taccattatt tgaatttaaa aataattttt cagcataatg tccttttgta
     1921 aaattaaaca tattcaaaat tgatcctgct ttttcatcaa aggaattgtc tccaatacgt
     1981 ccaagattcc aattatcttc tatgaatcgt aatattgatg tttgatctgt taattgatgg
     2041 ttgacataat ttactttcgc ccatggagaa ataataacaa taggcagtct tccaccgtaa
     2101 ccacaacgat cttgatactt actatattta ctaataagac cgcagaggcc atcaggacca
     2161 cctatagcgt catatttggg atcattagat tgcattacta ttggcggcat aacatgatca
     2221 taccatccac cagtgtcatc atatgcaatt ataattgcag tattattcca tttagatata
     2281 ttttgtaatt tgttaattgt atttactaaa aatgtttgtt cattagttgg atcagatgct
     2341 tttgcatgtc ctgtttgata ataaggtgct ttcaagaaac ttacagcagg aatattatta
     2401 gattcaactg cagcccaaaa atcagaaagg tcatattgat gattagcctg gtcggtttta
     2461 cctatcatac ttgtagatgt tggaggaagg tgagtagggt ttgcagttga tcgatagtat
     2521 tggaaaggtt catgatgtac aacataatct gtaatgttgt ttcctatgat atttacatgg
     2581 gaagatccac agactgcttt cccatcgtct gttctagacg ttggtttgaa tcctcctgaa
     2641 aaccaacccc atgttatttc tttattattt aaaagaccac ctatattttt tccagtcata
     2701 tatattttag ttccgttaga acagtcatca aagaaagtat cattatcacc tatcaaagtt
     2761 ccattagcga ctccattctc aatattagaa ggtattgctc catgtgtttg acctgaaata
     2821 agattaatat gtccaggtag tgagggaccg gtaatggtac tatgaaaatt gtcattaatt
     2881 gcaaaatgtt gagcataatt ccataatgca gttactgtat taccatcaaa ataacccatt
     2941 acttggctcg gattacagcc ctctattact attccgcttg attcaacaaa tttgtccata
     3001 aaacctctat tataagattt ttgtatggca gtataggcat ggttattgtc acatgatgca
     3061 actgtttttg aatcattttt actcattcta aaaggatcgt tcaagttcgt gttattatat
     3121 aaaagcgatt ttgtcaaacc atctattgaa ggtgtgttag cagaagcata aaatggaatt
     3181 tcactatcaa gattttctgc attaggatat gttccaaaat aatgatcgaa tgatacattc
     3241 tcttgaaaga taatgatcaa atgttgtata ggtgttgctg ttgttgttgt attattagaa
     3301 gtatttgtat tatttgttaa agatattgat cttaaagaag gagatattgt tgaacttgca
     3361 ttagccgcta aggggatcca gccacaaaaa atcacaacca aaacaaatgg tatgattatt
     3421 agtttcttgc taattaactg gtaagttaga aacattttag atatattaaa aaggattatt
     3481 atttaaaatc aaagattaat aaaaaaatat tatttaattt aacaatttac attttaatcc
     3541 agtagaaaag attatttact tttcaaatac attgagattt ttacatagat ctatcaaatc
     3601 ttcagggctt acatctttga ccacttcttc acatattgaa tcttctaaac ttgctatatc
     3661 atcataatat ttttgttcat cttctgcttc ttgaatatcg caatctttgc catcccaatc
     3721 acctttataa gtctgtatac atatatcttc agcatacttt tctacttttt ctattgctgc
     3781 atatactgtg gatgtcataa gcatcgaaac agaaaataat attatcatag taatggatag
     3841 tttttgttta ataatcatat tatgttatga atatagttac ttttatcctt tttttaaaat
     3901 ataattataa tattgaattt tattagaaaa ttgtttttct gatactttgt ccttatatct
     3961 tttgaaagct atgtatttaa ggtaattatg agcagtaata gcaacaattt cttttgtctt
     4021 gattatttct ttttgaaaca ttatgaattt catcaaagag gatgttaaca gttatgtaaa
     4081 tgtctagatt ggcaattata gtaaactgcc atttatcttt ttgacaatta tttctgatag
     4141 gtagagcttt agctgggcat ataattactc aatcatgtgg taaggtatac gcccatcaga
     4201 gaaattacag ataaagagaa aaacaaactt tatgctcttt tggatacaaa tccagat
//
LOCUS       DATIAS010000161         2450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1664039, whole genome shotgun sequence.
ACCESSION   DATIAS010000161 DATIAS010000000
VERSION     DATIAS010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664039"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..343)
                     /locus_tag="VLA74_03195"
     CDS             complement(<1..343)
                     /locus_tag="VLA74_03195"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HSF49741.1"
                     /translation="MIEKTPNGWKLVSHNQVYSSEYIELYEDELNINGIKKIYIQGTR
                     KNYSTIVPFISNKEILIIKSYRHLVDSVQIEIPSGYIESGETPIEAAVREFKEETGYV
                     ATELKLIGEYTL"
     gene            complement(413..2272)
                     /locus_tag="VLA74_03200"
     CDS             complement(413..2272)
                     /locus_tag="VLA74_03200"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HSF49742.1"
                     /translation="MFNTSSIFNKINYSLLSLFLFSSLFISIYGQQKNFTISGIVDDN
                     NYLYKFGPSFDTDDEEFYDVDHEDKLLLKEFTLSAWFNTDQTDFDNPAHIVNKGGFNS
                     DNKGENMNYGVWLSQEGTLTGGFETESGDDFQVISDQKYDDGKWHFVILGYNGSVLLS
                     NIDGKDINSLTVSEEPDINGDQPLRIGANSLDEDKFFDGKIDEVRVWSRGLTIQEIND
                     IYKHNNYESNGQIIYLNFGGNGTDSDQSSNLGGIKGEEGIKGQKLLDLTKHSISNNIS
                     NATSTAANTTTVLPTTTNATTETSKIDYYVFDKKYDIAVTGDWGCNNNTRLVVNYIQS
                     SDPKLIVTPGDLSYEETGECFYDVTKPISSKLKVALGNHDNEEDETKEIRYEYMKHFN
                     LTRPFYSFNQGNIHFLMMDSSLAPSKLSAQFYFVQQDLEYASKNPNIKWIFVVIHKPL
                     YTSPGKHPLDIQNTFLYHPLFDKYNVDIVFSGHNHWYERSLPLKFNYVNPTSPWVVIP
                     NSDTSNNYIHQISFEDNNGTLIDNKVNSTYKDPKHPIFVTVGTGGHRLYNIDELNVPN
                     YITKTYDYGFGFLGLNVTKNEVIGEFHGNHKDHSEKEVSKDSYIMKDSFRIVK"
BASE COUNT          783 a          415 c          344 g          908 t
ORIGIN      
        1 ccagtgtata ttcacctatt aacttcagtt ctgttgccac atatcctgtt tcctctttaa
       61 attctctgac cgcggcttct ataggtgttt cgccagactc tatataacct gaaggaattt
      121 caatttgaac tgaatcaacc agatgcctat agctctttat tatcaatatc tctttatttg
      181 aaataaatgg aacaattgtt gaatagtttt ttctagtccc ctgtatgtat atttttttta
      241 ttccgttaat attcaactca tcttcataaa gttcaatata ttcacttgaa tatacctgat
      301 tgtgagaaac taacttccac ccatttggtg ttttttctat catcaggaag gttaatgaat
      361 tcttaattat ttaatatttt ttctatcatt aacttgtaaa tagaataaaa tattatttga
      421 ctattctgaa tgaatctttc attatataac tatcttttga tacctccttc tctgaatgat
      481 ctttatgatt accatgaaat tctcctatta cctcgttttt ggtaacgttt agtcctagaa
      541 atccaaaacc gtaatcatac gtttttgtta tataatttgg aacattcagt tcatcaatat
      601 tatatagtcg atgacctcca gttcctactg taacaaaaat aggatgtttg ggatccttat
      661 atgtggagtt aaccttatta tcaattagtg ttccgttgtt atcttcaaat gaaatttgat
      721 gaatgtaatt attggaagta tccgaatttg gaatcactac ccagggcgaa gtagggttga
      781 cgtaattgaa tttcagtgga agagatcttt cataccaatg attatgtcct gaaaacacta
      841 tatcaacatt atatttatca aataacgggt gataaagaaa ggtattctga atatctaaag
      901 gatgttttcc tggagatgtg tagagaggtt tatggattac cacgaagatc cattttatgt
      961 taggattttt cgatgcatac tctaggtcct gttgcacaaa atagaactgg gcagacaatt
     1021 tcgatggtgc taatgaggaa tccatcatta gaaaatgtat atttccctgg ttgaaagaat
     1081 aaaatggacg agtcaaatta aagtgtttca tatattcata ccttatttcc ttagtttcat
     1141 cttcttcatt atcatgattc cctagagcta ctttcaattt cgatgaaatt ggttttgtta
     1201 catcgtaaaa acactctccg gtttcctcat atgaaagatc accgggagta actattagtt
     1261 tcggatcgga actttgaata tagtttacca ctagtcttgt attgttattg caaccccaat
     1321 cgcctgtgac tgctatgtca tatttcttat caaaaacata atagtcaatt ttacttgttt
     1381 cagtagttgc gtttgttgtt gtcggtagta ctgttgttgt atttgctgct gtactagttg
     1441 cgtttgatat attattggat atcgaatgtt ttgttaaatc taataacttt tgacctttaa
     1501 ttccttcttc accttttata ccacctaaat tagaactttg atcagaatca gttccattac
     1561 ctccaaaatt caaatatatt atttgtccat tggactcata gttattatgc ttatatatat
     1621 cgtttatctc ctgaattgtt aaccctcggg accatactct tacttcatct atttttccgt
     1681 caaagaattt atcttcatcc aaagaattgg caccaattct taatggttgg tcaccattaa
     1741 tatcaggttc ctcgcttaca gtcaatgaat taatatcttt cccatcaata ttggagagca
     1801 aaactgagcc attatatccc aagataacaa aatgccattt gccatcatca tatttttgat
     1861 ctgaaattac ttgaaaatca tcaccagact cagtctcgaa tccgccagtt aaggttcctt
     1921 cttgtgaaag ccacacccca taattcatat tttccccttt attatcacta ttgaagccac
     1981 ccttattcac aatgtgggca ggattatcaa aatctgtttg atcggtatta aaccaagcag
     2041 ataaggtaaa ttcttttagt aaaagtttat cctcgtgatc aacatcataa aattcttcat
     2101 catcagtatc aaatgatggt ccgaatttgt ataaataatt gttatcatca acaattccag
     2161 atatagtaaa attcttttgt tgaccatata tagaaataaa taaagatgaa aataagaata
     2221 aagataacaa ggaataattg attttattaa atatgctact tgtattaaac atgaacagct
     2281 aaaatattac ttgaatatac taaataaaaa tattgctact gttctcatac tttaactatt
     2341 agaaaagtat taaatagaat ttttagataa tacgaaaaat gatcccaaaa acattgtata
     2401 aaaacttaat agtatatttt tatataatta actttgtaaa aaagatctag
//
LOCUS       DATIAS010000162         2259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_574482, whole genome shotgun sequence.
ACCESSION   DATIAS010000162 DATIAS010000000
VERSION     DATIAS010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574482"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..722
                     /locus_tag="VLA74_03205"
     CDS             <1..722
                     /locus_tag="VLA74_03205"
                     /inference="COORDINATES: protein motif:HMM:TIGR02928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell division control protein Cdc6"
                     /protein_id="HSF49743.1"
                     /translation="DDILYNFTRANEQFQDTGFISIIGISNSLTFKDKLDPRVRSSLS
                     EEEIVFNPYKIHQLQKILSERVKLAFYDDVVTEGTINLCAAIAGKDNGDARKAIDLLR
                     VAAEIAERDKDIKVHEKYIRLAQYKIEKDTNFEIIKNSTTHTKIVLLAIAKSKNGNTG
                     EVYEIYSSLCKHLDNESLTQRRITQIINELDQLGLISTNIVNQGRYGRSQKIKISVPL
                     STLKEALYDDHLLSTITTTID"
     gene            complement(712..>2259)
                     /locus_tag="VLA74_03210"
     CDS             complement(712..>2259)
                     /locus_tag="VLA74_03210"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF003118.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed DNA polymerase II small subunit"
                     /protein_id="HSF49744.1"
                     /translation="YQIHPEAFKVLKNLNSNIMDIIQKVIRFKKTQNDDNNNIIVIED
                     FRNFCTINISTEYDDDLTADSSIKLSHTTLKQNNEIQELKTISTQKNIANKSTYNESF
                     KIIYDSTDYIDPEEGVNGYISLFKSRFSKTLRILSSRPESKRINKISFVKKRIKQKNN
                     NNYSENNLSSNGNTSIIAGLVMSKRSKKNSIELAIDDLTGIINTIALNEETIKLVSKL
                     TLDQMVMLEIENKGINYIIKNIISPDIPDHIPNKAKLEEYVVLISDLHIGSRYFKENE
                     FLRFLNWLNSSDNEIVSKIKFLCIGGDLIDGVGIFPNQEKELYDSTICLQMSHLTNLL
                     EQIPKRIQVFVIPGNHDLGRRALPQPSIPKKDAEILYSWKNFTMLGNPSYIELNGVKI
                     LMYHGQGLDDIIATIPGLSYSNPAEAMKTLLKARHLSPIYGQRTPLSAEKEDMMVITE
                     IPDILHSGHVHVMDVQNYRGTLIVNSGTWQDQTPFQQTMGIMPTPGIAIAVNLSTLRP
                     FQIDFSQ"
BASE COUNT          781 a          325 c          311 g          842 t
ORIGIN      
        1 gtgatgatat actctataac tttacaagag cgaatgaaca atttcaggat actggtttta
       61 ttagtattat tggaatatca aatagtttaa catttaaaga taaattagat ccaagagtga
      121 gaagtagctt aagtgaagaa gagatcgtat ttaatccata taaaatccat caattacaaa
      181 agatattatc tgaacgagtt aagctagcct tttatgatga tgttgttact gaaggaacaa
      241 taaatttatg tgcggcaatt gcaggaaaag ataatggtga cgctagaaaa gcaattgatt
      301 tacttcgtgt cgctgcagag attgccgaaa gagacaagga tattaaagta catgaaaaat
      361 atattcgtct agcacaatat aaaatagaaa aagatactaa ttttgagata attaaaaact
      421 ctactactca taccaaaatt gttttactag caatagcaaa atcaaaaaat ggaaacacag
      481 gagaagtcta tgaaatttac tcctcattat gcaaacattt agataatgag tcacttacac
      541 aacgtagaat aactcaaatt ataaatgaac ttgatcaact tggattaatt tcaactaata
      601 ttgtcaatca aggcaggtat ggtcgctctc aaaaaattaa aatctctgtt cccttatcta
      661 cacttaaaga agcattatat gatgatcatc tactatctac aataacaaca actattgact
      721 aaaatcaatt tgaaacggac gtaatgtaga aagattaact gctattgcga ttccaggagt
      781 tggcattatt cccatagttt gttgaaatgg agtttgatcc tgccacgtcc cagaatttac
      841 aattaatgta ccccgataat tttgtacatc cattacatgt acatgtccag aatgaagtat
      901 gtcaggtatt tcggtaatca ccatcatatc ttctttttct gcagaaagtg gtgtcctttg
      961 accatatatt ggagataaat gtcttgcttt tagtagtgtt ttcattgctt cagcaggatt
     1021 agagtaactt aatcctggta tagtagcaat aatgtcatca agtccttgac catgatacat
     1081 aagaatttta acaccattta actcgatata gctaggattt cctaacattg taaaattttt
     1141 ccaactgtat aatatttctg catctttttt tggtatagaa ggttgaggta aagcccttct
     1201 acccagatca tgatttcctg gaataacaaa tacttgaatt ctttttggaa tttgttctaa
     1261 taaattagtt aaatgactca tttgtagaca tatagtacta tcgtaaagtt ctttttcttg
     1321 attgggaaat attccaactc catcaattaa atctcctcct atacatagaa atttaatttt
     1381 tgaaacaatt tcattatctg atgaatttaa ccaatttaag aatcttaaaa actcattttc
     1441 tttaaaatac ctgctaccta tgtgtaaatc agaaattagg acaacgtatt cttccaattt
     1501 tgctttatta ggtatatgat cgggaatatc aggtgaaata atatttttta taatataatt
     1561 tattccttta ttttcaattt ctagcattac catttgatcc aatgttaact ttgatacaag
     1621 ttttattgtc tcttcattta aagcaattgt atttattatt cctgttaaat catctatagc
     1681 taattcaata ctattttttt tagatctttt agacattacc agaccagcaa ttatggatgt
     1741 atttccattt gatgaaagat tattttctga atagttatta ttattttttt gtttaattct
     1801 tttttttaca aaagatatct tattgatacg tttactttcc ggccttgaag ataaaattct
     1861 taacgtcttg ctaaatctac ttttaaataa agaaatatat ccattaactc cttcctcagg
     1921 atcaatatag tcggtggaat cataaataat tttaaatgat tcattataag ttgacttatt
     1981 agctatattt ttttgtgtag agatagtttt caattcttga atttcattat tttgttttaa
     2041 tgtagtatgc gataatttta ttgatgaatc tgcagttaga tcatcatcat attctgtaga
     2101 aatatttata gtacaaaaat ttcgaaaatc ctctataaca ataatattat tattatcatc
     2161 attttgagtt ttcttaaatc taataacttt ttgaattata tccattatat ttgaattaag
     2221 gttttttaaa actttaaatg cttcaggatg tatttgata
//
LOCUS       DATIAS010000163         2304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1527615, whole genome shotgun sequence.
ACCESSION   DATIAS010000163 DATIAS010000000
VERSION     DATIAS010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1527615"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..668
                     /locus_tag="VLA74_03215"
     CDS             57..668
                     /locus_tag="VLA74_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49745.1"
                     /translation="MPLNKFEKEKRVIELHLEGKTLKEISREVHMSFRDISKIRKAYD
                     KKIELQEKKKETQEKNQQTITKKKSLSTLSFKLFREGKKPTEVAIELNIPFKKTKKFW
                     AQFLNLERMEDCYEFYQDHRYDIPTFLSIKNFMERNNISGNNDVVNVLRTAKDILNLN
                     QTYSNLKTETKYLEQKRMYLLDYSPRSPYSLQPLPLNKPNYRY"
     gene            complement(738..1883)
                     /locus_tag="VLA74_03220"
     CDS             complement(738..1883)
                     /locus_tag="VLA74_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49746.1"
                     /translation="MINNLPVAENRPIEVFENRPIEQLVHSHGRGKWILDKELEELAL
                     KKYYTNGRGITFSDIVEEYRCRKDKSQRRLKNACIEKTDKNGKKFAILFRLDDKRTKP
                     QQYFPTCIKARIIENKRKRQNRLIDPTGTNYNNKTVSSSSSNYPLCNAVEQQMVNYFL
                     TQLSLLPYEQLNMHNIHMRVTIDKSHYEEIKLRPCSDKNKTKIQRELIDLREVVYKFN
                     KNGSVEIEIGCSKNPFPIETTNDVNNFFVFLGQVKCILAIILNDPTQRIVPPVDNWIL
                     KSCDFNKDVELDNKNIGQLMGLNIQVKHMGEAFRLYVKNLEDRFALRGEKVMKVNQPI
                     TSFMNDSILNPLHLINNKFDEVLNIIEKRFDEINNRISRMEKLTSMG"
     gene            complement(2038..2220)
                     /locus_tag="VLA74_03225"
     CDS             complement(2038..2220)
                     /locus_tag="VLA74_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49747.1"
                     /translation="MNTANSKSTLLNNSFTSNTHEEICNCLGCSQLADTEISLKIGEK
                     SITIFVCENCKPKFEN"
BASE COUNT          782 a          338 c          308 g          876 t
ORIGIN      
        1 aacaccttac catttattaa gttctttttt taattgatat tattgtagtg gaatttttgc
       61 cattaaacaa atttgaaaaa gagaaaaggg tcatagaatt acatttagag ggaaaaacgc
      121 taaaagagat atccagagaa gttcatatgt cctttagaga tatatcaaaa attagaaaag
      181 cctatgacaa aaaaatagaa ttacaagaaa aaaagaaaga aacacaagaa aaaaatcaac
      241 aaacaataac taaaaaaaaa tccctaagta cgctatcttt taaactattt agagaaggaa
      301 aaaagccaac tgaagttgct attgaactaa atattccctt taaaaagaca aaaaaatttt
      361 gggctcaatt tttaaattta gaaagaatgg aggattgtta tgagttttat caagaccata
      421 gatatgatat accaacattc ttatcaataa aaaattttat ggagagaaat aatatttctg
      481 gaaataatga tgttgtaaac gttttgagaa cagctaaaga tattcttaac ctaaatcaaa
      541 cctactcaaa ccttaaaact gaaactaagt acttggaaca gaaaagaatg tatttattag
      601 attattctcc tcgttcgcct tatagtttac aacctttacc gctgaataaa ccaaattata
      661 gatactaaga cacttgtcat agatttcaga atgttctatt gaagaattaa atacctattt
      721 tgaattggca aaattattta tcccatactt gttaattttt ccattctact aattctatta
      781 tttatttcat caaatctttt ttcaataatg ttaagaactt catcgaattt attattaatc
      841 aaatgtaatg gatttaatat tgaatcattc ataaaagagg ttattggctg attaactttc
      901 attacttttt ctccccttaa cgcaaaccta tcttctaagt ttttaacata taacctgaaa
      961 gcttccccca tatgctttac ttgaatattc aaacccatta actgcccaat atttttatta
     1021 tcaagttcaa catccttatt aaaatcacaa ctttttaaaa tccaattatc tactggagga
     1081 actattctct gtgtagggtc atttagaata attgctaata tacatttaac ttgcccaaga
     1141 aacacaaaaa agttgttaac atcattcgtt gtttctattg gaaatggatt cttagaacat
     1201 cctatttcaa tttctacact gccattctta ttaaatttgt aaactacttc tcttaaatca
     1261 attagttctc tttgtatctt agttttattt ttatcagaac aaggccttag ttttatctct
     1321 tcataatggc ttttgtcaat agttacacgc atatggatat tatgcatatt caattgttca
     1381 taaggtagta gcgatagttg tgttagaaag tagtttacca tctgttgttc aacagcattg
     1441 cataatggat aattggagga agatgatgat actgtcttgt tattgtagtt agtacctgta
     1501 gggtcaatta gtctattttg tctttttctt ttattttcaa taattcttgc ttttatacaa
     1561 gtagggaaat attgttgtgg cttagttctc ttatcatcta atcgaaatag aattgcaaat
     1621 tttttgccat ttttatctgt tttttcaata caggcgttct taagtctacg ttgagatttg
     1681 tctttccgac atctatattc ttcaactata tcggagaagg ttatccctct accatttgta
     1741 taatattttt ttaatgcaag ttcttccaat tctttatcta aaatccattt tcctcgccca
     1801 tgactatgga ctaattgttc aattggtcta ttttcaaata cctcaattgg tctattttct
     1861 gctacaggta gattattaat caattttatt tgtatatttt agataagagt tctgctgttg
     1921 ttttaaaaga attgatattt gcaaagatat tctaaaaaat attattatcg tttgtggatt
     1981 agaaaattta taattcatta tattgtataa caagattgat tgagttatca tgttagttca
     2041 attttcaaat tttggtttac aattttcaca gacaaatatt gtaattgatt tttcaccaat
     2101 tttcaatgat atctctgtat ctgcaagttg actgcatcct aaacaattgc atatttcctc
     2161 gtgagtatta gaagtaaaag aattattaag tagtgtagat ttactattag ctgtattcat
     2221 aagatttcct ccttatgagt aactttgtct tgtctgatga tggtcttggc gggctgacat
     2281 cggacaagat agttttttct ttta
//
LOCUS       DATIAS010000164         9684 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1801019, whole genome shotgun sequence.
ACCESSION   DATIAS010000164 DATIAS010000000
VERSION     DATIAS010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 9684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9684
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1801019"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(378..1799)
                     /locus_tag="VLA74_03230"
     CDS             complement(378..1799)
                     /locus_tag="VLA74_03230"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF49748.1"
                     /translation="MIDTNSNRYFTLLVLLFLSIILLVFFSYSNIHAQQEQQKEAQGI
                     DGITLSDPNLKLELVISGLDFPTTMAFLGPDDFLILEKSGTVKRVTNGKVLDKPLLQV
                     DVSVKDERGLLGIAVSEKKENSNGTSIQNKDMSHNVFLYYIICNEKNEDCKNQIYRYD
                     LDNKNNVLVNPKLLLSIPSFPDPAHIGGIIDIGPDNNLYVTVGNFENTIPDEPYKTKT
                     QNFEDGEPIDGRAGILRITQDGKPVGAEGILGNEYPLNLYYAYGVKNSFGIDFDPITG
                     KLWLTENGPKYGDEINLAEPGFNSGSDKIFGIWKVNDEGKKLKTASNKGGEEEQEGSG
                     YVTVVGDNPDDLVYFNGKGHYRSPEFTWDKSVAPTALLFLNSNKLGSQYQNDMFVGSV
                     DAGRIFHFDLKENRTGLDLKGVLEDKIATDSTEYGDILFAEGFSIITDLKQGPDGYLY
                     VVSGLKQSKTEEKPGAVYRILHF"
     gene            complement(1975..3165)
                     /locus_tag="VLA74_03235"
     CDS             complement(1975..3165)
                     /locus_tag="VLA74_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49749.1"
                     /translation="MNYSFIVLVLFSMILLLVTSLNIDIANAFEKATDYKFVKKWGGE
                     GSEDGQFLRPHDLDFNKEETILYIVDRDGSRIQAFDKDGNFLFKFGEDGTDDGQMHVP
                     YGIDIDNEGNIWLADRANDRIQKFDSKGNFILKFGSEDGVPSVEEGKFDNPRHVVVSK
                     NLKYVYVADSKNDRISQFDINGNYIKSIGKLGNRSGEFNLPTTIEIDSKGNFIVNERG
                     NERIQKFDSNWNSILMWGTKGSGDNQFCHIEHIALDKYDNVYVTDPQSDPGCSQQPRV
                     LKFDSEGKFITKFGGSFGKGDGQFQDPEHLAIDSEGNVYVSDRKRDDIQKFAPITEET
                     SSSNGIIDTSTTSNNNLLSSSSSLQKETHKKGNTNVLSAIAPKLANTTKIIDTKAWDK
                     LFMQ"
     gene            complement(3891..5537)
                     /locus_tag="VLA74_03240"
     CDS             complement(3891..5537)
                     /locus_tag="VLA74_03240"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF49750.1"
                     /translation="MNKSIIIILLSLSVTSFTFFTFGNNIYAQQQQTQQSLSGENITL
                     YDPNLKLELVTAGLDFPTTMAFLDQDDFLILEKNTGNVKRVVNNTLIEKPVLNVNTIT
                     IKDERGLLGIAVSKKKNFYDDFYIEKRNLTYNVFLYYIECNDKKKNLDCENRIYRYEL
                     DNQKNELVNPKLLVGLPSFPDPSHIGGIIDIGPDENLYFTVGNFQDTIPSKVYKTKTQ
                     NVEDGEAVDGRAGILRMTQDGRLVENVNGSYNGILGNDYPLNLYYAYGIRNSFGIDFD
                     PITGKLWDTENGPQFGDEINLVEPGFNSGADKIYGIWESNELGDRVKDKKGKYIIVGD
                     NLEDLVYFDEKGRYSPPEFIWGKTVAPTALLFLDSDKLGAKYKNEMFVGSADGGRIFH
                     FELNETRDGLVLKGNLTDKIALNNTEYGDILFAEGFSIITDVKQGPDGYLYIVSGLKQ
                     SKTEKFGAVFRIVPTELSNNSSSSNTKYDSIILHTQEKEKRDSIMNESTNNTNTNLTT
                     TQSENVPKKGNTNVLSAIAPKLANTTKIIDTKAWDKLFMQ"
     gene            complement(5825..5983)
                     /locus_tag="VLA74_03245"
     CDS             complement(5825..5983)
                     /locus_tag="VLA74_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49751.1"
                     /translation="MEYSKGKVESKTTTTLNLLNNKTDNKVFVIHLYIVISVKKVFRK
                     IPYFATYS"
     gene            complement(6273..6635)
                     /locus_tag="VLA74_03250"
     CDS             complement(6273..6635)
                     /locus_tag="VLA74_03250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49752.1"
                     /translation="MKKEQYHVNYEWERYADTLTVGNIYDKIIGFKGILYNINDTAVK
                     LESWVDLENGGKGPYKKVHEFIDNGNWGDAMTECGAKRDGQAITWGSPLVIIKANDFK
                     FDIYDIEVREIIPPYRDK"
     gene            complement(7051..7434)
                     /locus_tag="VLA74_03255"
     CDS             complement(7051..7434)
                     /locus_tag="VLA74_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49753.1"
                     /translation="MDNKEITLFSLLCCILIIIIIITTIISYYNYSTNNQFSTLYIQA
                     QLESNNKDIDNNKKEELDDKDDTNEKDKKKKKDDDDIDSWTKADHDLITKYNYRNLAI
                     PKVYQTAPGGETYKFKHDNPNGKAK"
     gene            7628..9397
                     /locus_tag="VLA74_03260"
     CDS             7628..9397
                     /locus_tag="VLA74_03260"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HSF49754.1"
                     /translation="MSSFITLMILSLLVINSSYAQNYGSSNSTSNNNDYNLDNLEITT
                     NDTTTKTLSSSSLSYKFEPFLSLDGTTFKDIPNNDTLTLNNFAIAAWINTNQSTLSES
                     SLLVNKGGFNSEEEGDNMNYGIWFSKNGNIQGGFETESGENLQVSSSAKYNDGKWYFI
                     LLSYDGSILRLDIDGKQISTKNTNGAIPDSTGKEPLRIGANSLENDKYFTGYIDEVRV
                     WNRGLTDKEISQIYANNTFNSKGQVVYLDFKNNDSSSSNAISNSNNSSNIISNNTSSI
                     ASLYTNKTSEIENNNNNFNIAVAADWGCDDSAKKTVENIQEKDPELVIAAGDLSYEES
                     SKCWFEIIKPLKSKMKIAMGDHEYSNTKRGAVGIVNQYLKPLNLEKTYYSFDINNVHV
                     TIIDPYINYKLGSTQYQFIENDLKTASNNPEIDWTFVVESTPMYTSSSVHPADSTIRY
                     IYHPIFDKYEVDLVFSSDNHNYQRTYPLKYNSSIDSSDNPIIVDRNQHNYNYNNKNND
                     NKGIIYFITGTAGRSHYEIKEQAPFVAKQDDKHFGFLNIDIDGKTLKGTFYANESELP
                     NYYYVDYQNNIIDEFTISKIDTQ"
BASE COUNT         3339 a         1470 c         1209 g         3666 t
ORIGIN      
        1 gacaaagctt aagaagatcc agaagtaaga taatatgata cattattact gtatcataca
       61 gacaggcaaa gtatcaaatg gcacagcagt agtgatataa gaatagaact agaggagact
      121 tttacataga tgcgtaatta ggaaggaatc aaaatattct gaaaatataa ctaatttttg
      181 taaattttat aaatataaca acattattct cttttatctc agatcaaata tgtaatattt
      241 tatattgtcg ctaattacgc aatagatcta ttatattact agaacatttt acattatagc
      301 aataagtgaa taattatttt atattgtcta ttgtgatttg cattattatt tattatcttt
      361 tattatgcta ttaattatca aaaatgtaat attctataaa cagcaccagg tttttcttct
      421 gtttttgact gctttagtcc tgaaacaaca tagagataac catcaggacc ttgttttagg
      481 tctgtaataa tactaaaacc ttctgcaaat aatatatcac catattctgt actatctgta
      541 gctattttgt cttctaaaac accttttaaa tccaatccag ttctattttc tttcagatcg
      601 aaatggaata ttcttccagc atctacagat ccaacaaaca tgtcattttg atattgggaa
      661 cctaacttgt tagaatttag aaataataac gcagttggag ctactgattt atcccatgta
      721 aattctggag acctgtaatg tccttttcca ttaaaataaa ctaggtcatc tggattgtct
      781 cctactactg ttacatatcc acttccttct tgttcttctt ctcctccctt gttacttgct
      841 gtctttaact ttttaccttc atcgttaacc ttccaaattc caaatatttt atcagaacca
      901 ctattgaatc cgggctctgc caagttaatc tcatcgccat atttaggtcc attttctgta
      961 agccacagtt tgcccgttat tggatcaaaa tcaataccaa aactattttt tactccatag
     1021 gcataatata ggttaagagg atactcattt ccaagtattc cttcagcacc aacaggttta
     1081 ccatcttggg ttattcttaa aattccagct cttccatcaa taggctcacc atcctcaaaa
     1141 ttctgagtct tggttttata tggctcgtcg ggaatagtat tttcaaaatt ccctacagta
     1201 acataaagat tgttatctgg accaatatct attatcccac caatgtgagc agggtctgga
     1261 aatgatggaa tagataataa tagttttgga tttacaagaa cgttattttt gttatctaaa
     1321 tcatatctat aaatttgatt cttacaatct tcatttttct cattacatat aatataataa
     1381 agaaaaacat tgtgagacat gtctttattt tgaatagatg taccgttaga attttccttc
     1441 ttttcactaa cagcaattcc caacaaacca cgttcgtctt ttacacttac atcaacctgt
     1501 aaaagcggtt tatctaaaac tttaccgtta gtaactcttt ttactgtacc tgatttctct
     1561 aaaattaaaa aatcatctgg acctaaaaat gccatagtag taggaaaatc aagtccagat
     1621 attaccaact ctaattttaa gtttggatca gagagagtta ttccatcaat accttgagct
     1681 tctttttgtt gttcttgttg tgcatgaata ttagaataac taaaaaaaac aagaagtatt
     1741 atagataaaa ataataaaac taacaaagta aaatatctat ttgaatttgt atcaatcatt
     1801 ttatttaatc aaagatatga tacttgacta tttataaatt agatctgata aattgaaatc
     1861 ttcattcata aatcttctaa tatcgaggag cgttttggct aacactatca taaaatagat
     1921 atgatattta ttattgcaca agaagatttt tcttccttct atcagtttta ctttctattg
     1981 cataaagagt ttatcccatg cctttgtatc tattatttta gtggtattgg ctaactttgg
     2041 tgctattgct gaaagtacat tagtattccc ttttttatga gtttcttttt gtaatgatga
     2101 agatgatgat aggagattat tattactagt agtagatgta tctattattc cattactgct
     2161 acttgtttct tcagttatcg gtgcaaattt ctgaatatca tctcttttcc tatcagacac
     2221 atatacattg ccttctgaat ctattgccaa gtgttcagga tcctgaaact gaccatctcc
     2281 tttaccaaaa gatccaccaa attttgtaat aaatttgcct tcactatcaa actttaatac
     2341 tcgaggttgt tgactacaac caggatcaga ttgaggatct gttacataga cattatcata
     2401 tttatctaaa gcaatatgtt caatatgaca aaattgattg tctccacttc ctttagttcc
     2461 ccacattaaa atagaattcc aattgctatc aaatttttgg atacgttcat ttcctctttc
     2521 atttacaatg aaattgcctt ttgaatctat ctctattgta gtaggaagat taaattctcc
     2581 agatctattt cctaattttc caattgattt aatatagtta ccgtttatat caaattgtga
     2641 aatacgatca ttttttgaat ctgctacata aacatatttt agatttttac ttacaacaac
     2701 atgcctagga ttatcaaatt ttccttcttc tacactagga actccatctt cgctgccaaa
     2761 ttttaaaata aagtttcctt tactatcaaa cttttgtatt ctatcatttg ctctatcagc
     2821 tagccagatg ttgccttcat tatcaatatc tataccatat ggaacgtgca tttgaccatc
     2881 atcagttcca tcttcaccga atttaaaaag aaaattgccg tctttatcaa atgcttgaat
     2941 acgactaccg tctctatcaa caatatatag aattgtctct tctttattaa agtctaaatc
     3001 atgtggtctt aaaaactgac catcttcaga tccttctcct ccccattttt ttacaaattt
     3061 ataatctgta gctttttcaa atgcattggc tatatcaata tttaatgatg taactaacaa
     3121 caagatcatt gaaaataata caagaacaat aaaagaatag ttcatattga taataattac
     3181 cttcattttg catattttct taagaaggtt ataaaaagta tttcatatat ttaaaatgaa
     3241 tagtatacaa tagatttatc atagtagtag taataatctg atataattta atttaatatt
     3301 atctcaatat tacattactt tattctttca aaagtcttta attgatgata cagttaagat
     3361 tcaaattatt tatcttataa aaagacatta tttataatta ttatttatct tgataattat
     3421 gttatttttt gagaaaatat tatctcaagt aaaactaagg caatattact ttttcaatct
     3481 aatatattta ttaaatgcac atacaaattt tggctatgtt aagagcattg taattacctt
     3541 ggtagtatat aatgtaaagt aaaagtgatt actttggatt ggttacttct aaaagaagtt
     3601 gttcatagat aataaaacaa agtaattagt gttggtttac acaaataact tactaatgtc
     3661 tttacaaaac tgttaagtta aggagaattt ataaattaaa ttgaaaaatt cttctgaaat
     3721 tgagcacaga atataatata aaagtagaac atacttatta ctttatcctt aagttaatag
     3781 ggccccaaat ttttactgta atcattgttt aactatattt actttagatt ttgatttttt
     3841 aatttaaaat catttttcat tattcaattt atatgtatct attttaatgc ctattgcata
     3901 aagagtttat cccatgcctt tgtatctatt attttagttg tattggctaa ctttggtgct
     3961 attgctgaaa gtacattagt attccctttt ttaggaacat tttctgactg agttgttgtt
     4021 aaattagtat tagtattatt agtactctca ttcattatac tatctctttt ttccttttct
     4081 tgtgtatgta gaattatgct atcatatttt gtattgctac tgctgctgtt gttgctgagc
     4141 tcagtaggta caatcctaaa gactgctcca aacttttctg tttttgactg ctttagtcct
     4201 gaaacaatat agagataacc atctggacct tgttttacat ctgtgataat actaaaacct
     4261 tctgcaaata atatatcacc atattctgta ttatttaatg ctattttatc tgttaaatta
     4321 ccttttagaa ctaaaccatc cctagtttca ttcaactcaa aatgaaatat tcttccacca
     4381 tctgcagacc caacaaacat ctcattttta tatttagcac ctaatttatc agagtcaaga
     4441 aacaataatg cagttggagc aaccgtttta ccccatataa attctggagg actataacgt
     4501 cctttttcat caaaataaac taaatcttca agattgtcac ccacaatgat atatttacct
     4561 tttttgtcct ttactctatc acctaattca tttgattccc aaattccata tattttatct
     4621 gcaccactgt taaagccagg ttctaccaag ttaatttcat caccaaattg tggtccattt
     4681 tctgtatccc ataattttcc agttattgga tcaaaatcaa taccaaaact atttcttatt
     4741 ccataagcat agtataggtt aagaggataa tcgtttccta gtatgccatt ataactacca
     4801 ttaacatttt caactaacct gccatcttga gtcattctta atattcccgc tcttccatca
     4861 actgcttcac catcttcaac attttgagtc tttgttttgt atacttttga tggaatagta
     4921 tcttgaaaat tccctacggt aaagtaaaga ttttcatcag gaccaatatc tattatacca
     4981 ccaatatgtg aaggatcagg aaatgaaggt aaacctacta acaatttagg atttacaagt
     5041 tcattctttt gattatctaa ctcatatcta taaatacgat tttcacagtc tagatttttc
     5101 ttcttatcat tacattcaat atagtacaaa aagacattat atgttagatt tcttttttca
     5161 atataaaagt catcgtaaaa gtttttcttt ttgctaacag caattcctag caaaccacgt
     5221 tcatctttta tagttatagt attaacattt aaaactggtt tttcaatgag tgtattattt
     5281 actactcttt ttacattgcc agtatttttt tctagaatta aaaagtcatc ttgatctaaa
     5341 aatgccatag tagtaggaaa atcaagtccc gcagtaacta attctaattt tagatttgga
     5401 tcataaagtg taatattttc tccactaaga gattgttgag tttgttgttg ttgtgcataa
     5461 atattattgc caaaagtaaa aaatgtaaaa gaagtaacgg ataaagataa taatataata
     5521 attatacttt tattcatttt ttatctgtag aatgggaaat aaggttatat ataaattata
     5581 gaagaaggat atcatttttt ttctaaataa ctattaaata tttttgttaa taaaatcata
     5641 ctagattatc ttactatttt tataatagtg attcaaattc atttcgagat taatgattat
     5701 atctatctag atattaagta ttcctttctt gatctttata cttgtttttg ttagttaaca
     5761 tcaattatat tttccaaata tatattatgt ttatgaatat ggcatttatc agaacagaaa
     5821 tagtctatga atatgtagca aaataaggga ttttcctgaa tacctttttt acagatatta
     5881 caatataaag atgtataaca aatactttat tatcagtttt attatttaac agatttaatg
     5941 ttgttgttgt ttttgattca acttttcctt ttgaatattc cataataatt atcatcatca
     6001 ttttttattt tagagtataa aaatttatta tagctaatat tgtcattatg cactagaaat
     6061 ttaggaaata atgtgttaca agataataat gaaaaaggaa tagatggatg taaatataag
     6121 agaaagtggt acatgacaaa gatgtactat ctataaaagt gtctttattt agcattctaa
     6181 tcacaatgta gaatattttt atatttaatt caattttatt ttttcatatt aaaaaaatag
     6241 aattaaaata gatatattgc agatttattt ctttatttat ccctatatgg gggaattatt
     6301 tctcttactt ctatatcata tatatcaaat ttaaaatcat ttgctttaat aattaccagc
     6361 ggtgaacccc atgtaatagc ttgaccatct ctcttagcgc cacattctgt catagcatct
     6421 ccccaattac cgttatctat aaattcatgt acttttttat agggtccttt gccaccgttt
     6481 tctaaatcaa cccaactttc tagttttact gcagtatcat ttatgttgta tagtatacct
     6541 ttgaaaccaa ttattttatc ataaatgttt ccaacagtta aagtgtcagc atatctttcc
     6601 cattcatagt taacatgata ttgttccttt ttcattctta aatatccttc attagatata
     6661 ttgttgtggt aacttgatcc tccacaataa aaaggtggtt tgccatcatc gtcatcgtaa
     6721 tcatcatact tctcactatg tgttattgat ctagttacta gagaaatagc atgttgttct
     6781 cccttcgagc gtgatgaatc aagtaattta aaaattaagg taacttctac attcttccaa
     6841 tcagtaggtt tataccaata tccttatctt ttagttcaga ataattccag ctttgaattt
     6901 taactttaga taaattgttt aattggtcta ctttatcagg taaaatacca gcatccttgg
     6961 tatagatatc tatcctaggc tctccatatt ctattctcca gcttccatct ttgttttgtt
     7021 ttgtaaaaac attttcctta tcctcttcat ctacttggct ttaccatttg gattatcgtg
     7081 tttgaattta tatgtctctc ctccaggcgc agtctgatat actttgggta ttgctaaatt
     7141 tctataattg tatttagtaa tgagatcgtg atccgctttt gtccaagagt caatatcatc
     7201 atcatctttt ttcttcttct tgtctttttc atttgtatca tctttatcgt ctaattcttc
     7261 ttttttgtta ttatcgatat ctttgttgtt actctctagt tgagcttgaa tatacaaagt
     7321 agaaaattga ttattggtag aataattata ataactaata atagttgtta ttattataat
     7381 gataattaaa atgcaacata ataaagaaaa taatgtaatt tctttattat ccatttgcat
     7441 tttttatatt atatctataa ctatatataa ataaatagaa tgagaatgag agaaataatt
     7501 tctataatat atattaaaaa agattacaat tctttatatg tacaataaaa aaaatatatt
     7561 ttctataacg gtaaattgca tatatctttt atttagttta taaagataag aatctgtgtt
     7621 aaaaatattg tcttctttca taactttaat gatactatcg ttattagtaa tcaattcaag
     7681 ttatgctcaa aattatggta gtagtaatag cactagtaat aataatgatt ataatttaga
     7741 taatcttgaa attactacga atgatacaac aacaaaaaca ttatcatcat catcactatc
     7801 ctacaaattt gaaccatttt tatcattaga tggaactaca ttcaaagata taccaaataa
     7861 tgatacacta actctgaata attttgctat tgcagcatgg attaatacaa atcaatctac
     7921 tttatcagag tcatctctct tagtaaacaa aggaggattt aactctgaag aagaaggaga
     7981 taacatgaat tatggtattt ggttctctaa aaacggaaat atacaaggag gatttgaaac
     8041 tgaatcagga gaaaacctcc aagtttcctc ttctgcaaaa tataatgatg gaaaatggta
     8101 ttttattttg ttgtcttatg atggatctat cttaagatta gatatagatg gaaagcagat
     8161 atcaactaaa aatacaaatg gagcaattcc tgatagtact ggaaaagaac ctttacggat
     8221 tggggcaaac tctttagaga atgataagta ttttactggc tatatagatg aagttagagt
     8281 atggaataga ggtttaacag acaaggaaat atcacaaatt tatgctaata atacttttaa
     8341 ttcaaaagga caagttgttt atttagattt caaaaataat gatagtagta gtagcaatgc
     8401 cattagtaat agtaacaaca gcagcaatat aattagtaat aatactagca gtatagcatc
     8461 tctttatact aataaaacat cagagataga aaacaataat aataacttca atattgcagt
     8521 tgctgcagat tggggttgcg atgattctgc taaaaaaaca gtagaaaata tccaagaaaa
     8581 ggatcctgaa cttgttattg cagcaggaga tctcagttat gaagaatcat caaaatgctg
     8641 gtttgaaata ataaaaccgc ttaaatcaaa gatgaagata gccatgggag atcatgaata
     8701 cagtaatacc aagagaggag cagtaggtat tgtcaatcaa tatctaaagc ctttgaacct
     8761 tgaaaaaaca tattattctt ttgatattaa taatgtacat gttactatta tagatccata
     8821 tattaattat aaacttggtt caactcagta tcaattcatt gaaaatgatt taaagactgc
     8881 ttctaacaat ccagaaatag attggacatt tgttgtagag tctacaccta tgtatacatc
     8941 atcttcagta catcctgctg attctactat caggtacatt tatcatccta tatttgataa
     9001 atatgaagtt gatttagtgt ttagtagtga caatcacaat tatcagagga cttatccact
     9061 aaaatataat agcagtatcg atagttctga taatcctatt atagtagata gaaatcaaca
     9121 taattataat tataacaata aaaataatga taataaagga attatttact ttataacagg
     9181 aactgcaggc agatctcatt atgagataaa agaacaagca ccatttgttg caaaacaaga
     9241 tgataaacat tttggatttt taaatattga tattgatggc aagactttga aaggaacttt
     9301 ttatgcaaat gaaagtgaat tacctaatta ttactatgta gattatcaaa ataacataat
     9361 agatgaattt acaatttcaa agatagacac acaataaaaa gatttaaaaa actttaaaga
     9421 tgtcaggcaa aaatacatta ttaaaattat agaattacta tgatagtagc actaacaata
     9481 tactcaagta taaacattct tcttttatta taattgttgt ttttattatt gaatttaaaa
     9541 gatattttaa aagaaattga gaaggattta ggttatcttt attattaaag ttatatattt
     9601 taataataaa taaatagata aattggtata tgcatatatc tctaccttag aataaccaag
     9661 ccaaaatgat catcattctt attt
//
LOCUS       DATIAS010000165         2431 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1527731, whole genome shotgun sequence.
ACCESSION   DATIAS010000165 DATIAS010000000
VERSION     DATIAS010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1527731"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1053)
                     /locus_tag="VLA74_03265"
     CDS             complement(<1..1053)
                     /locus_tag="VLA74_03265"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF49755.1"
                     /translation="MSLINLKKDTTPIVVLCFIMLTCISIIFCPKLTYSEKMPNNSFV
                     SYNSVNIEQKKDHGANDFGKQDFTFAAVGDWSCNKEAIKTASNILATNPDIILGLGDY
                     SYQKNMKCWKDIVEEIDPQKLKISFGNHEFESQSLAKQYMDYTNVDQQYYSFNHNNVH
                     FIAMSTEAPYEEGSKQFQFVHDDLIKTKTDSSIDWIIIYFHQAMYTSKSNHEGLESFR
                     DTYHGVFEKFGVDLVLQGHLHNYQRTYPLLYNDENPANPTIIQAAVLGEGSGEDLYVD
                     SQGTIFAIVGTGGKDFHQLNDQSYFNAKQFEEYGFLEIKVVDNGNRLDAKFYGNDGEI
                     KDKFSIEKSAENQSDNP"
     gene            complement(1862..>2431)
                     /locus_tag="VLA74_03270"
     CDS             complement(1862..>2431)
                     /locus_tag="VLA74_03270"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HSF49756.1"
                     /translation="YGFEALAIYEGLAWLADRVLKPGGSLVFFVDHVILDQVIRLFDD
                     NNDDLKYWWIFCVKHSRNHSKVYPRHVCVEWNPILWYVKGDKANNLTLSNTIGDHIDA
                     KPLPKTPDDREQSSVEAEYIIKNLTIENQTVLDPMMGLGTVGIACFNMKRKFIGIEKD
                     SEKFKIANARMNNGYYKSSTQNYQNSFVS"
BASE COUNT          781 a          402 c          359 g          889 t
ORIGIN      
        1 aggattatca ctttggttct ctgcagattt ttctatacta aatttgtcct taatttcgcc
       61 gtcattccca taaaatttcg catcaagtcg gtttccattg tctacaactt ttatttccaa
      121 aaatccatac tcttcaaatt gctttgcgtt aaaataagac tgatcgttca attggtgaaa
      181 atcctttcct ccagtaccaa ctattgcaaa aatagtacct tgggaatcaa cgtacaaatc
      241 ttctcccgag ccttctccta aaactgctgc ttggatgatg gtagggttgg ctggattctc
      301 atcattatat aatagtggat aagttctttg ataattatga agatgtcctt gtaatactaa
      361 atctactcca aatttttcaa agacaccgtg ataagtatcc ctaaatgatt ctaatccctc
      421 gtgattactt ttggaagtat acattgcctg atggaaatat atgattatcc agtcaataga
      481 tgaatcagtt tttgttttta ttaaatcatc atgaacaaat tgaaattgtt ttgacccctc
      541 ttcataaggt gcttctgtag acattgctat aaaatggaca ttgttatgat taaaagaata
      601 atactgttga tcaacatttg tataatccat atattgtttt gctaatgatt ggctctcgaa
      661 ttcgtgatta ccgaaagata ttttgagttt ttgaggatct atttcttcta caatgtcctt
      721 ccaacatttc atattcttct gataggaata atctcctaat cccaatatga tgtcaggatt
      781 tgtagctaga atattactag cagtttttat tgcttcttta ttacaactcc agtctcctac
      841 tgctgcaaaa gtgaaatctt gcttaccgaa gtcatttgct ccatgatctt ttttttgctc
      901 tatattaaca gaattataag aaacaaaaga attgttaggc atcttctccg aatacgttaa
      961 ttttggacaa aaaataatgg atatacaagt taacattata aaacacaata ctactattgg
     1021 tgttgtatct ttttttaaat ttattagact cattatttac tataatcact tgaatggtaa
     1081 aaaggaaatc gatagtatat ggtttagcaa tataaagaac tctatattat gtataggagt
     1141 caagtaataa tataaaacat ctacaaaaat aattgcaaat agaactatcg tactagtaat
     1201 aagtcagtat cattgttact ataacgctgg tcactgccaa taataactta tacacttaag
     1261 aatatggaga agaatataga gaatagtaga aactattatc aatctaaata aattactatg
     1321 tggaataaat aatgaggaat actcattgta accttatgaa gtacggagta agtcttgcgt
     1381 tcgattctgc ttactccgta tatttaaaat ttctaaatgt attcgtgaga gttttgtcga
     1441 ttatatgaga atattttata aaaccgtaat agagaaatgt tttacaagcc tctgtgatgc
     1501 agtagcttta gataatttat aattttgtcc atagtcatat atagatctct ataatatata
     1561 tttattattt atatttgacc aattattaga gacagatctt cagaaaaatt ctgctcattg
     1621 tatatatatc tacttttaag taataaaata atgaatatgg agagtattac aatgtccata
     1681 atactgggca ttgtactatt gaatattttg tcatggggca atgtctacgg actcggggat
     1741 gaagatggtt tgacgataac attttactga taactctagt actatgtttc ttttccaatc
     1801 aatcagtttt tgtcgtaaat atttgtgctc atatattgca attttctctt ctcataatat
     1861 attaagacac aaatgagttt tggtaatttt gagtacttga cttataatac ccattattca
     1921 ttcttgcgtt tgcaatctta aatttttcag agtctttttc tatacctatg aattttctct
     1981 tcatgttaaa acaagcaatt ccaacagtgc ctaatcccat cataggatcc aataccgttt
     2041 gattttctat tgtaagattt tttataatat attctgcttc aactgaggac tgttcccggt
     2101 catcaggtgt tttaggtaaa ggtttagcat caatatggtc tccaattgta ttggataaag
     2161 tcaagttatt tgctttgtct cctttcacat accatagtat tggattccat tctacacaaa
     2221 catgccttgg atagactttc gaatgatttc gggaatgctt aacgcaaaaa atccaccagt
     2281 attttagatc atcattattg tcgtcaaata gccgtataac ttgatccaga attacatgat
     2341 ctacaaaaaa gaccagacta cctcctggtt tcagtactct atcagctagc catgctagcc
     2401 cctcataaat ggcaagtgct tcaaatccgt a
//
LOCUS       DATIAS010000166        12778 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_166733, whole genome shotgun sequence.
ACCESSION   DATIAS010000166 DATIAS010000000
VERSION     DATIAS010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 12778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12778
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166733"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(519..1046)
                     /locus_tag="VLA74_03275"
     CDS             complement(519..1046)
                     /locus_tag="VLA74_03275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49757.1"
                     /translation="MDPASGHVEVFNAPEGQGPYGITTTPNGSVYYASLAGNHIASIN
                     LETGGATVIEPSTPDQGARRVWSDSEGNLWISEWKAGQIAAYNPVIDKWTEWKLPGDN
                     PQPYAIYVDKNDIVWTSDFGANALVPFDPIQESFEVFVLPSADANVRQILGVSGQVWG
                     AESGTDKLVMIQTEH"
     gene            complement(1823..3154)
                     /locus_tag="VLA74_03280"
     CDS             complement(1823..3154)
                     /locus_tag="VLA74_03280"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HSF49758.1"
                     /translation="MVIWFHLKFILLAVILSSLFYFSEIFAINETAEKLSFNGFLQIQ
                     NGYNNSFISDWNFSNIINITNNKLDSVYAQIAAIDNNVYLVWQESVDDNSDENNYDIY
                     FKKSLDNGSTFSKSINLSNNIGFSEHPQIAVSKNGIFIVWADNTNSNNINILFSRSLD
                     NGTTFSEPINLSNNSKNSNNQEISASDENVYVVWQETDPTSPNNNKKALSSIMFKSSS
                     DSGKTFNNTKELTNDTRDAYPKINSYFDYVYVVWNNENNDGGLDDFKNNGLFFTRSYD
                     NGNSFENINKIAHNNFGEAQIAVSKNEIFVVWGGLHSKNINGIFFVKSDDNGTTFTDP
                     YTILENVTKFKDQNYSNKINHPTNVETIANSPSNIVWQDVISKENQDIFITNIKNNFQ
                     ATKVLNLSNNIGISECPQIATSENYIYVVWEDFTPGNHEIFFTKGTGKQNK"
     gene            complement(3279..4709)
                     /locus_tag="VLA74_03285"
     CDS             complement(3279..4709)
                     /locus_tag="VLA74_03285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSF49759.1"
                     /translation="MLSVLYLPSQTSFAHHVVKEIAVTERPMKISLDEPLLFVSNLGQ
                     PVVSIISTVSDKVVGTINTTQGVIDVEGVNDKNKLYVATFQTGEIEVYDITTKKLIKT
                     IPIPGSTIQFPQRLADTALVTSTVITGGSSLEYNPNNELLYIANYNTDEVIVIDTKND
                     DTIVKTIQVSAHPIDVKVDTVTNQVLVTSFASKKLTFISGDTNEITGTVDTGISPWGI
                     GIDNGKHLAYIGHHNSPYIAVVDILNKKVIKQIPIGFEGQSVVVDTNEHKIYVSFHDI
                     DKVVKINGNTNEIETVIELDGRTPNDIAVDSNSHKLYASIKSSNNLFVMGPESYALSV
                     PVVTQEPPILFVDNIIVHGQDVQILNPVLMDTSTAAGEKYSFISPYLTSAAILDSENK
                     TLSMQVASSDGGELQIKIPRTILDTIMEGERNMTVLVDGKKTEFIEIPSSPSDQQLQQ
                     KDITKEISVFIPKGDKKVEITGKILS"
     gene            5198..6829
                     /locus_tag="VLA74_03290"
     CDS             5198..6829
                     /locus_tag="VLA74_03290"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HSF49760.1"
                     /translation="MHLINKGIARKQVKYIFVTGGVLSGLGKGIITSSTSKILQLTGL
                     NVSCLKIDPYVNYDAGTMNPVAHGEVFVTFDGGECDMDIGNYERFLDKRLSKDHNLTT
                     GRIYSKVINAEREGKYLGQCVQIIPHVTDVIKDQLRHIAKTESLDVLVVECGGTVGDI
                     ESLPFLEAFRQMTLEEGHNSTLFIHVTLAPVLDVVGEQKTKPTQHSVQELRRIGINPD
                     IIAVRCKTPLLNDTRKKISLFANIDTDCVISCHDVKSIYLVPEILAEQGMMRIINKKL
                     QLDRSAIRWANWKRISQSFAQAKGNINIAVVGKYVSLSDSYVSVYQALSHAATAIGKK
                     AEISLIDSEQFERDPKKLNSLKKFDGILIPGGFGRRGSEGIIDAINYSRKENIPFLGI
                     CFGFQLSIVSFARSMCGLKGSNSTELDPETGHPVIEFMPEQRTINNMGGSMRLGGHKI
                     NIVANTMASKIYSRNIICKRHRHRYEFNKNYLSIIQKNGMLLSGYSDGGKRTEILEIP
                     DHKFYFAVQYHAEFDSRPGKPEPAFASFIKACTKS"
     gene            complement(6819..7823)
                     /locus_tag="VLA74_03295"
     CDS             complement(6819..7823)
                     /locus_tag="VLA74_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HSF49761.1"
                     /translation="MKIALVGAYSQDLELTIKIKKVLDTLNVETFNMNEKNYDLANKV
                     DLVLIAGGDRAMLDYFHKVITDSSPAIGVYEAESTDFLAQIDVQDLETITHRLKKGDY
                     SIDEVIRLAVKVDEKEIEPVLNDVVVFPSRSATLMEHVLRIDNKDVWHDNSDGVIVST
                     PTGSTAYSMSAGGPMVLQKSQVFVIVSVNSVDNTRRPLIVPNESRIEISDILSRFHCE
                     VVLDGGRRVGIKKTLECNKHNYPAKLVRLIGEDSATSLIAKKVKLAEDLLDMPPSAKL
                     ILKILEYEGAMGQKDLSSKTLLPERTIRLSLGHLLNRGYVKKKTSLRDARQRIYELKI
                     "
     gene            8035..8322
                     /locus_tag="VLA74_03300"
     CDS             8035..8322
                     /locus_tag="VLA74_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S26e"
                     /protein_id="HSF49762.1"
                     /translation="MPKKRTSRGRTKGGKGSSGTVHCSQCGAIVPRDKAKKITGRITL
                     VEPTLAKELRAQGAYISPATDVKFYCVSCAVHRGIVKVRSELERRVSTRLR"
     gene            complement(8324..8920)
                     /gene="pgsA"
                     /locus_tag="VLA74_03305"
     CDS             complement(8324..8920)
                     /gene="pgsA"
                     /locus_tag="VLA74_03305"
                     /EC_number="2.7.8.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylinositol phosphate synthase"
                     /protein_id="HSF49763.1"
                     /translation="MLNKFRKNLAPILEKIASIFASSGLSPNTLTIIGFILAITSSIA
                     YGLNSIEKDIFFNAALVGSIILLISGFFDVIDGSVAKITKKTSRKGAFLDSTLDKISE
                     VIIFIGIAIGGLSNPILCMTALSSSLLVSYTRSRAESLGIDLSGVGFGERAERLLILA
                     IMGIIPIQNFLEYGVIIIIIISILTIIQRIFNTIKKLD"
     gene            9063..9698
                     /locus_tag="VLA74_03310"
     CDS             9063..9698
                     /locus_tag="VLA74_03310"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HSF49764.1"
                     /translation="MKKSNSVLVFGAHPDDLEIGMGGTISKLSRMGLEVIPIIATLPN
                     FTENDTKDERRSESIESSKILGCISPEFLDLSPNEMIFNRKLVSLIDNLIKKYQPESV
                     FTQWIGDSHQDHQILTKSVMSASRDIDNLYMYETTIPGGLTEISFKPQLYVDITTDID
                     TKKNALTCFKSQFVRCGQYWLDAIVGRSSYRGYQMHTKYAEAFEIIKTIKF"
     gene            complement(9753..10889)
                     /locus_tag="VLA74_03315"
     CDS             complement(9753..10889)
                     /locus_tag="VLA74_03315"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSF49765.1"
                     /translation="MLKFIKSNKGLIHIIVGNILGALITGGFWLLLASLQSVEEYGET
                     SYMISMASLASSIALLGLNTTVTTYIPKGFDKIHVAANQVILISSIVLGIIVAQKDIL
                     LGFFVVGMAFWMMSIYEYLGRKSYKQYAFANIGARAIQLVLSIALYYIMGIPGIIIGF
                     TISFFIFSYKYFLSIKHFKKDIKEIRSKIKFSLHSYSFNMSNALLMYFDKILIGPIFG
                     YVILGYYQLGFQFLMFLGMIPISFFQYLIPEEASGNKKTKLRILGFGISIALAVLLYF
                     SSPIIIDLFFPGYKNSLDAIRIMSIGIIPMMITYIINSRFLSEGNTKGVVIGAIIYQI
                     LQISLMLTLGKWMEVTGLALAVIIALTIQAVFLIIYRKISSKKG"
     gene            11352..>12778
                     /locus_tag="VLA74_03320"
     CDS             11352..>12778
                     /locus_tag="VLA74_03320"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HSF49766.1"
                     /translation="MKNSDKKFKVLFAGILIFISYLVLNSLTYLPVNAQSQSTFLTLS
                     GSNFLDVKNSERLQLDKFTLATWFSTDKQDFVDPGMIVNKGGMNDDAPGKNMNYGLWI
                     TPTELLEGGFETKSGTNLFITSKNKFNDGNWHHAVLTYDGSVLKLYVDGNEEGQLSTL
                     KAVPDNTGTQPIRIGANSFAKDKFFTGKVDEVMIWDRALSFEEISNSYNFDEFPLNGR
                     ILYLSFSSVSPIQSTYNYAPFKTFDGSEKDEIDEDEQVFHLSNFSAASWFRSDRIDHD
                     KVGILLNRGGFGSELQDENLNYGIWLNPSETIEAGFETSSGTNVFVTTLDKFNDGLWH
                     YVVLTYDGKTLKLYVDGILVDDKITSGILPDLAGDTKFVIAGDSVADDKFFKGDLDEI
                     RVWNRAISSDEVLSGFKNNIFNIDGQIFYESYSGESPPPPQQEECPAGQHFDTTTNAC
                     VPDLPPPPPQEECPAGQHFDTTTNA"
BASE COUNT         4256 a         2124 c         2017 g         4381 t
ORIGIN      
        1 atttggcaaa acgttgtgta cagtatattc attaattaga ttaatttttg cattttttgc
       61 attcactatt aatgcagtgt gcataaagta gataaccttg caacatcgct gactgtcatg
      121 ataagaaaaa tatgtaattc tttttacaat ctttttcctg acttacaatc gtctttatcg
      181 catatcctaa ttgtatgttt cccatcaaac agatagatct cattttgtcc tgttattttt
      241 agttctatat tactagtatc attataaagt gttaagttgt tatcttaatt tatggtatca
      301 tgaaaaataa caccaagaaa attcgttctc catcatgcat ttcgcttatg ccaaatgtcc
      361 gtttgcaacg atcaaatatt cttcaccatc aagttaatga aaggatgaat taatattgtt
      421 attacattat catctatcgc ttcttttcac ttcttaactt atgaaatcgg ccattgtaac
      481 tttacatcaa attcttttag taaccgttca ataatcaatt aatgttcagt ttgaatcatg
      541 acaagtttgt ctgttccaga ttctgcaccc catacttgtc ctgaaactcc cagaatctga
      601 cgtacgttgg catctgcact aggcaataca aatacctcaa aactttcttg gataggatca
      661 aatgggacta aggcattggc tccgaaatcg cttgtccata caatatcatt cttatctaca
      721 taaatcgcat aaggttgggg gttatcgcct gggagtttcc actctgtcca tttatctata
      781 accggattat aagcagctat ctgtcctgct ttccattcac tgatccatag attaccttca
      841 gaatcagacc aaacacgtct agctccttga tcaggagtag atggctctat aacagtagca
      901 cctcccgttt ctaaattaat actcgcgatg tggtttccag ctagtgaagc atagtaaacg
      961 ctaccatttg gtgttgtcgt aataccatat ggtccttgtc cttcaggagc gttgaagacc
     1021 tcgacgtgtc cactagctgg atccaagcga ccataaatac cactctgtcc agtaaaccat
     1081 agaacaccgt gaaggtcaaa tgtagcagta tttagattag catagctatc acctgcaggt
     1141 agcgaaaaca gtctgatctc ttagtctggg gatcaacacg tataatggca ttgagtcctc
     1201 catctgttac ccaaggagcg ccgtcaggtc ctacaataac gccgtgtagt gcagagtcac
     1261 gacccagctt aatgtgatga gttttaccag taattgggtc aatttgaccc acttcaccgg
     1321 atccttgagc tgtataccat atagttccat ccggtgcagg agccacgtcg tgtgggtgcg
     1381 accctactgg aactggaaac tctcgtatca taggattgat taagcgctca gcctcaactg
     1441 gtccaacaat tgacatctta ttaaatgtgg acattagagc ttgagtaatt gtaggaaaag
     1501 accatgtctt ttcttttcag ttgattgtac atctaattct tgaattgtta tttcaggtaa
     1561 aaaaacacaa caagacaagg ccaataataa tcctgataga tatctggaaa ttatattaga
     1621 tgaatataac aatttatgct tagataactc tgacgttact taaataattt tgtttctaaa
     1681 actgtgattt taaatataat actaaaccat cttttgtata ctttatatat tacgatataa
     1741 ggtatagtat gctagttatc ggtgagctag agtttctata cattaaataa attctattat
     1801 aataaaatag aaatactaaa ccctatttat tttgcttgcc tgttccttta gtaaagaata
     1861 tttcatgatt acctggggta aaatcttccc atacaacata gatataattt tcagatgttg
     1921 caatttgggg acactctgaa atgcctatat tattacttaa atttaatact ttagtcgcct
     1981 gaaaattgtt tttaatattt gttataaata tgtcttggtt ttcttttgaa attacgtctt
     2041 gccatactat atttgaagga ctattagcga ttgtttcaac attcgtagga tggttaatct
     2101 tattagaata attttgatct ttaaatttag taacgttttc taaaattgta tatggatccg
     2161 taaaagtagt accattatca tcacttttga cgaaaaagat gccatttata ttttttgaat
     2221 gtaatcctcc ccaaactaca aatatttcat ttttagaaac tgctatttgc gcttctccaa
     2281 aattattatg ggctatctta ttgatatttt caaaactatt tccgttatca taacttctag
     2341 taaaaaatag tccattgttt ttaaaatcat ccaaaccgcc atcattattt tcattattcc
     2401 acacaacata tacataatca aaataggaat ttatcttcgg ataagcatct ctagtatcgt
     2461 ttgttagttc ttttgtatta ttgaatgtct ttccgctatc tgaactgctt ttaaacatga
     2521 tactagacaa agctttttta ttattattgg gagaggttgg gtcagtttct tgccacacga
     2581 catacacatt ttcatcagaa gccgaaattt cttgattatt tgaatttttt gaattattgc
     2641 ttaagtttat tggttcacta aatgttgtac cattatccaa acttctgcta aacaatatgt
     2701 tgatgttatt agaattagta ttgtctgccc aaactataaa aattccattt ttagatacgg
     2761 caatctgagg atgttcggaa aatccaatat tattactcaa attgatagat ttactgaatg
     2821 tactcccatt gtctaaactt tttttaaaat aaatgtcata attattttca tcagagttat
     2881 catcaacaga ctcttgccat accagatata cattattatc aattgcagct atctgagcat
     2941 acacagagtc gagtttattg tttgtgatat taattatatt tgaaaagttc cagtccgata
     3001 taaaagaatt attatagcca ttttgaatct gcaagaaacc attgaaagat aacttttcag
     3061 ctgtttcatt tattgcaaaa atctcagaaa aataaaataa agaactaagg ataacggcta
     3121 ataaaatgaa tttcaggtgg aaccagatta ccatataaac atttttggaa tttaacttat
     3181 gaataatcat ataattatta gtatatgatt ctaatctatt tcaacctatt tgaaactagt
     3241 ctttcataat ctgctatttt taaaaattaa ataaaaattt aggaaaggat ttttccggta
     3301 atttctactt ttttatctcc ttttggaatg aatactgaga tttcttttgt tatatctttt
     3361 tgttgtagct gttgatcact tgggctactt ggtatttcta taaattctgt tttttttcca
     3421 tctaccaata ctgtcatatt tctttctcct tccataattg tgtctaaaat tgttcttgga
     3481 attttaattt gtaactctcc tccatctgat gatgccactt gcattgatag agttttattc
     3541 tcgctatcca aaatagcagc tgatgttaga tacggagaaa taaagctata cttttctcca
     3601 gcagcagtag aagtatccat caatacagga tttaatattt gaacatcttg accatgtact
     3661 ataatgttat ctacaaacaa tattggaggt tcttgtgtta ctacggggac actaagagca
     3721 tatgattctg gtcccataac aaaaagatta ttagaagact ttatagaagc gtataactta
     3781 tgagaatttg aatcaacagc tatatcattt ggtgttctac catctagttc tatcactgtc
     3841 tcaatttcgt tggtattccc gttaattttt acgactttgt caatgtcatg aaatgataca
     3901 tagatcttat gttcattagt atctactact actgattgac cttcaaaacc gataggtatt
     3961 tgcttgatta cttttttgtt taaaatatct actacagcaa tatagggact attatgatga
     4021 ccaatatatg caagatgttt accattatct ataccaatac cccaaggaga aatacctgta
     4081 tctactgttc ctgttatctc atttgtatct cctgaaataa atgtcaactt tttggaagca
     4141 aaacttgtta ccaagacctg attggtaaca gtgtctacct ttacatctat cggatgtgca
     4201 gaaacttgta ttgtttttac tattgtatca tcatttttgg tatctattac tattacctca
     4261 tcagtgttat agtttgcaat atataatagc tcattattag ggttatattc aagggatgat
     4321 ccgccagtaa tcactgttga agttaccaat gcagtatctg ccaatctctg tggaaattgt
     4381 atagtggacc caggaatagg aattgtcttt atcaattttt tagttgtaat atcatacacc
     4441 tcaatttctc cagtttgaaa cgtagcaaca tatagcttat ttttatcatt aacgccttcg
     4501 acatcaatta caccttgtgt tgtattgata gttccgacca ctttatcgga gactgtacta
     4561 ataatagata ccactggttg acctaaatta gatacaaata ataacggttc gtctaatgaa
     4621 attttcatag gtctttccgt tacagcaatt tcttttacta catggtgagc aaatgaggtt
     4681 tgacttggaa gataaagtac gcttaacata aagatggtta tgaaaattgt agatgtaaaa
     4741 aaaacaatat taggagtggt ttgctttatc attattagaa atttgattta aaagtatttt
     4801 aatataacga tttccatgct atctattacg tataagatct tgaagctgaa ataaagtaat
     4861 tttttataat cattaaaatt acaaaataaa tattaaatat tttaattatt acttcgtata
     4921 ataatttatc taacatcctg tgaaaaagtg ttaaacatag ttttgccaga aaataattcc
     4981 aacaatacct gattttttta accctttgtt aaaaacacaa aacttctgaa ttgaatcctc
     5041 atacacttgt aaaatataaa taaaaacttg gttaaattga aagtatttat ctaatctact
     5101 ttgttatagc tcgtaaatca gttacaaaga taagaaaatt caatgacctt gatcctgcca
     5161 gaaaaaggaa taaaaataag attatctaaa ctttgatgtg cacttaataa ataagggaat
     5221 cgccagaaag caagtcaaat atatttttgt tactggtggt gttctttctg gcctcggaaa
     5281 aggaataatc acatcttcaa cttcaaaaat attacaatta actgggttaa atgtttcttg
     5341 cttaaaaatt gatccatacg taaattacga tgcaggtacg atgaatcctg ttgcccacgg
     5401 tgaggttttt gtaacatttg atggcggaga atgtgatatg gatatcggga attatgagag
     5461 attcttagac aaaagattat ccaaggatca taatttgaca accgggcgaa tatattcaaa
     5521 agttataaat gcagaacgtg aaggaaaata ccttggacaa tgtgtccaaa taattcctca
     5581 cgttacggat gtaattaagg atcagttaag gcatatagcc aaaacagaat cattggatgt
     5641 tctagtagtg gaatgtggtg gaaccgtggg agacatcgag agcttaccat ttcttgaggc
     5701 gtttcgtcaa atgacactcg aagaaggaca taatagcact ttatttattc acgttacttt
     5761 ggcccccgtt cttgatgtag taggagaaca aaaaaccaag ccaacacaac acagtgttca
     5821 agaattacgt agaataggaa tcaatcctga tattattgca gttagatgta aaactcctct
     5881 tttaaatgat acaagaaaaa aaatatctct ttttgctaat atagacacag attgcgtcat
     5941 ttcgtgtcat gatgtcaaat cgatttatct agtaccagaa attcttgctg aacaagggat
     6001 gatgagaatt ataaataaaa aattacaact ggatcgatct gctattagat gggcaaattg
     6061 gaaacggata tctcaatcat ttgcacaggc taaaggaaat ataaatattg cagtagtagg
     6121 aaaatatgtt tctctctctg atagttatgt cagtgtttat caagctttat cccacgccgc
     6181 aacagccata ggaaaaaaag ctgaaatttc attgattgat tcagaacaat ttgagagaga
     6241 tcctaaaaaa ttgaattcgt tgaaaaaatt tgatggaata cttattcctg gtggatttgg
     6301 aagacgaggt tcagaaggaa ttattgatgc tatcaactac tctagaaaag aaaatattcc
     6361 atttttaggt atttgttttg gatttcaatt atctattgtt tcgtttgctc ggagtatgtg
     6421 tggattaaag ggatctaatt ctactgaact tgatccagaa actggacatc cagtcattga
     6481 atttatgccc gagcaaagga caataaataa tatgggtggt tctatgcgat taggaggtca
     6541 taaaataaat atagttgcaa ataccatggc atccaaaatt tattctagga atataatctg
     6601 caagagacat agacatagat acgagtttaa taagaactat ctatccatta tacaaaagaa
     6661 tgggatgcta ttatctggat actcggatgg tggaaaaaga actgaaatat tggagattcc
     6721 cgatcataag ttttattttg cggtgcagta tcacgcagaa tttgatagta gaccaggaaa
     6781 gccagaacct gcatttgcat cattcataaa ggcctgtact aaatcttaag ctcatatatc
     6841 ctctgtcttg catcccttaa cgatgttttc tttttaacat aacccctatt caataaatgc
     6901 cccaatgaaa gcctaattgt tctttcagga agtaacgttt tagaggaaag gtccttttgt
     6961 cccattgcac cttcgtattc caatatcttt agtattagtt tggcactggg aggcatatcc
     7021 aataaatctt ctgcgagttt aacttttttg gctataagtg atgtagcaga atcttctcct
     7081 atcaatctca ccaacttggc tggataatta tgtttattac actccaatgt ttttttaatt
     7141 ccaacccgcc tccctccatc caaaactact tcacaatgaa atctacttaa aatgtctgaa
     7201 atttcaattc gactttcatt aggtacaatg agtggtctgc gagtattatc taccgagttt
     7261 acagaaacga ttacaaaaac ttgcgatttt tgtaatacca ttggaccacc agctgacata
     7321 gaatatgctg ttgatccagt tggggtagat acaataacac catcgctatt atcatgccat
     7381 acatctttgt tgtctattct aagtacatgt tccattaaag ttgcacttct gcttggaaaa
     7441 acaacgacat catttaatac aggttcaatt tccttttcat caactttaac tgctagtctt
     7501 attacctcat ctatgctata atctcctttc tttaatctat gtgtaattgt ctctaaatct
     7561 tggacatcta tttgtgccaa aaaatcagtt gattctgctt cgtatacacc tatagcagga
     7621 gatgagtctg ttattacctt gtgaaaataa tctaacatgg cacgatctcc tccagcaatt
     7681 aataccaggt caactttatt agccaagtca taattttttt cgttcatatt gaaagtttca
     7741 acattaagtg tatcaagcac ttttttgatc tttattgtta attctaaatc ttgcgaatag
     7801 gcacctacaa gtgcaatttt cattagtttt atttatctaa acctatctct catttaaagt
     7861 taaattctat tacatcataa tattcactat acacaattat gaaaacatta aaagtatatc
     7921 ttttgtctga tcctatcaat taatttgaat tatttgtact tttatctgat gtaaagaatt
     7981 ttgcaaataa tttttaccag aacctttaaa gtatggaatt aagatgatat ttacatgcca
     8041 aagaaacgta cgagtcgggg tcgtacaaaa ggaggaaaag gtagttcagg aaccgtacat
     8101 tgcagtcaat gtggagctat tgttccaagg gataaagcta aaaaaataac aggccgaata
     8161 actctagtag aaccgactct cgcaaaagaa ttaagagccc agggtgctta tatatctccg
     8221 gcaacggatg ttaaattcta ttgtgtttca tgtgccgttc atagaggaat tgttaaagta
     8281 agatctgagc ttgaaagacg ggtaagtaca agactacgat aattcaatct agttttttta
     8341 ttgtgttaaa aatcctctga attatagtca gaatagatat tattattatt attataactc
     8401 catattccaa aaaattttga attggtatta ttcccattat agctaatatc aataatcttt
     8461 ctgccctttc tccaaatcct actccactta aatctattcc aagtgattct gctctagatc
     8521 gagtgtaact taccagcaaa gatgaggaga gagccgtcat acacaatata ggattagaca
     8581 agcctcctat tgctattccg ataaatatta ttacctcaga aatcttatcc aatgtggaat
     8641 caagaaacgc tcccttccta gatgtttttt tagtaatttt cgcaacactt ccgtctatta
     8701 catcaaaaaa tcctgaaatt aacaaaatga tactgcctac taatgcagcg ttaaaaaaaa
     8761 tatccttttc tatggaattt aacccatatg caatggacga tgtaatcgca agtatgaagc
     8821 caataatagt tagagtattt ggagataatc cagacgacgc aaagattgat gctatttttt
     8881 caagaatcgg tgctagattt ttcctaaatt tatttaacaa tagatattta actaataatt
     8941 ttaattaaat tcgatttata tcttttaagt cgttttatat cttttaagtt ttattcaaaa
     9001 ttgatttttc ttcttctttc ggaaaataat ttaatagtct tctctgttta catcgaattc
     9061 atatgaagaa atctaactca gttctggttt ttggcgcaca tcctgatgac ttggaaatag
     9121 gaatgggagg aacgatttcc aaactttcaa gaatgggtct tgaagtaatc ccaataatag
     9181 ctacccttcc aaattttact gaaaatgata caaaggacga acgtagatcg gaatctatag
     9241 aatcgagcaa aatattagga tgtatttctc cagaatttct tgatctttca cctaatgaaa
     9301 tgatattcaa tagaaaatta gtatcgttga tagacaattt aataaaaaaa tatcagcccg
     9361 aaagtgtgtt cactcaatgg ataggtgatt cacatcagga tcatcaaatt ctgacaaagt
     9421 cggtaatgtc tgcttctcgt gatattgata acttgtatat gtatgaaacg actattcctg
     9481 gtggtctaac tgaaatatca ttcaaaccac aactttatgt tgatatcacc acggatatag
     9541 atacaaaaaa aaatgcatta acttgtttta aatcacaatt tgttaggtgc ggtcaatact
     9601 ggttagatgc gatagtagga agatctagtt acagaggata tcaaatgcat actaaatatg
     9661 ctgaggcatt tgaaattatt aaaaccatta agttctaatt tcaaggttta ttaaatatct
     9721 atatttttgt gtgctccaaa ttcgaaattt attcatccct ttttagatga aatcttccta
     9781 taaattatta gaaatactgc ttgaatcgtt aatgctataa tgacagctaa tgcaagcccc
     9841 gtcacctcca tccattttcc taatgttaac atcaatgata tttgtaaaat ttggtagatt
     9901 atggcaccaa ttacaacacc tttcgtattc ccttcactaa ggaatctaga attaatgatg
     9961 taagtaatca tcatgggaat aattccgata ctcattattc ttattgcatc aagcgaattc
    10021 ttgtaaccag ggaaaaacaa gtctattatg ataggacttg aaaaatacaa taagactgcg
    10081 agtgctattg atattccaaa tcctaaaatc cttaactttg tttttttatt accgctcgct
    10141 tcttctggaa tcaaatactg aaagaaactg ataggaatca taccaagaaa cattaaaaat
    10201 tgaaaaccta attgataata tcctaatata acgtatccaa aaataggacc gataagaatc
    10261 ttatcgaagt acattaacaa cgcgtttgac atattaaaag aataactgtg taaagaaaat
    10321 tttattttac ttctgatttc cttgatatct tttttgaaat gttttattga taaaaaatat
    10381 ttataactga agataaagaa tgaaattgta aatccaatta ttattcctgg gatacccata
    10441 atgtaatata aagcgataga gagaactagt tgaattgctc ttgcacctat atttgcaaat
    10501 gcatattgtt tataagattt tctaccaaga tattcataaa tactcatcat ccaaaaagcc
    10561 atgccgacaa caaaaaatcc taataatatg tctttttgtg ctacaattat acctaaaacg
    10621 atgcttgata ttaagataac ttgattagcg gcaacatgta tcttatcaaa accttttgga
    10681 atataagtcg taaccgtagt attgagtcct aatagagcaa tgctagatgc aagtgatgcc
    10741 attgaaatca tataactggt ctccccatat tcttcgacac tttgtagtga agccaataaa
    10801 agccagaagc cgcctgtaat cagagcacca agaatatttc caactattat gtgaataaga
    10861 cccttatttg atttaataaa tttcagcaat ttttatgtcc cttttatgta ttatcatcaa
    10921 taatctttct cttaataaaa tggtttattt cattttttgc attatatttt tttagttcat
    10981 tcgtaaaagt aattccaatt attctttcaa gttgattttt tcatacctct ttatacatta
    11041 ttattgttat aatataatat tactacaaaa aatacgaaaa aaaatctaga gttaaaaata
    11101 attatcaata attattgtac aaaatagagt tcgtcataaa tattcagaat cctttttcat
    11161 ataaatgaaa gggaattttt taaaaaaact aaattacata attaatatcg gaataaattc
    11221 tgttatacat ggcgtattgg gaatttctaa cttggttgtg gtaatagtat taagtagaat
    11281 aactgtaaaa aggtcatagg agtattttta aatagtagac taaatgtaaa aggattctgg
    11341 gagtaagtta gatgaaaaat tccgataaga aatttaaggt tttatttgct ggaatattaa
    11401 tatttatctc ttatcttgta ttaaactctt tgacatattt accagttaat gctcaatccc
    11461 aaagtacttt tcttacactt tcaggatcga attttcttga cgtaaaaaat agtgaacgat
    11521 tgcaattaga caaatttact cttgctacat ggttttctac agataaacaa gatttcgtag
    11581 atccagggat gattgtaaac aagggaggta tgaatgatga tgcccctggt aaaaacatga
    11641 attacggtct ctggataaca ccaaccgaac ttttagaggg aggttttgag acgaagtcag
    11701 gtactaatct ctttataaca tctaaaaata aatttaacga tggtaattgg catcatgcag
    11761 ttcttactta tgatggctct gttttgaaac tgtacgtaga tggtaacgaa gaaggtcaac
    11821 tctctacatt gaaagctgtc cctgacaaca ctggaactca acctataaga ataggtgcaa
    11881 attcatttgc aaaagacaaa tttttcactg gaaaggtgga tgaagttatg atttgggata
    11941 gagcattatc gtttgaagaa atatctaatt cctataactt tgatgaattc ccattaaatg
    12001 gaaggattct ttatctttcc ttttcatcag tctctccaat acaatctacc tataattatg
    12061 ctcccttcaa aacttttgac ggaagtgaaa aggatgaaat tgatgaggat gagcaagtat
    12121 ttcatctaag taatttttcg gcagcaagtt ggtttagaag cgatagaatt gaccatgaca
    12181 aggtgggaat attattaaac aggggtggat ttggatctga actacaagat gaaaatctaa
    12241 attatggtat atggttgaat ccatcagaaa ctattgaagc tggttttgaa acttcatccg
    12301 gtacaaatgt tttcgtgact acattagata aatttaatga tgggctgtgg cattacgttg
    12361 tattgaccta cgacggaaag acattaaaat tatatgttga tggtattctt gtagatgata
    12421 aaataacatc aggaatactg ccagatttgg caggcgatac aaaatttgtt attgctggtg
    12481 actctgttgc agatgataaa ttctttaaag gtgaccttga cgagattcga gtatggaata
    12541 gagctatatc ttcggatgaa gttttaagtg gatttaaaaa taatatattt aatattgatg
    12601 gacaaatatt ctatgaatcg tactcaggtg aaagtccacc tccaccacaa caagaagaat
    12661 gtccagcggg tcaacacttt gatacaacca caaacgcatg tgtcccagac ttaccacctc
    12721 caccaccaca agaagaatgt ccagcgggtc aacactttga tacaaccaca aacgcatg
//
LOCUS       DATIAS010000167         2595 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_439477, whole genome shotgun sequence.
ACCESSION   DATIAS010000167 DATIAS010000000
VERSION     DATIAS010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439477"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VLA74_03325"
     CDS             <1..450
                     /locus_tag="VLA74_03325"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: protein motif:HMM:NF014098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HSF49767.1"
                     /translation="GIDKSNVPSNNIICLPNDPFLSAEKLRLEFLTRLGIKVGIIISD
                     SRLMPTRIGTTGVAIGCAGIEPVEDQRGNKDLFGHVLKYTLKATADSLATMGTFVMGE
                     SNESIPGVVIRGINISFTDRRLSWKDLAIDYETDIYFRSIQNLNPIL"
     gene            514..1065
                     /locus_tag="VLA74_03330"
     CDS             514..1065
                     /locus_tag="VLA74_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49768.1"
                     /translation="MSEFLTRYPKKMNFLKGLQESIKSEDIQFDHLSLLVKTKKDEII
                     KALILEGFTKVKFENKKPGQIGHGFTKKLKKPWEIHIRLLNMHQGLIAIQGEVEISRK
                     YIQHIRSVRAPVIYEIESILKKHRIEYKIWNDKVRDYITNIIENHQIILNSPKLPAMP
                     WILMIIFGSMIGSLHGLKLFGIF"
     gene            1123..2244
                     /locus_tag="VLA74_03335"
     CDS             1123..2244
                     /locus_tag="VLA74_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSF49769.1"
                     /translation="MGIPEKIKEIEDEIHKTQINKATEFHIGLLKAKIAKLKRELEEN
                     RHGKTVSAGKGSSGYDLRKEGDATIVLIGFPSVGKSTLLNCLTNANSKIASYQFTTLT
                     AIPGMMEYRGAKIQVIDLPGIIKGAASGKGMGKKVLSVARNADLVLIIVDVFQPNHYS
                     ILIKELSEIGIKVNKKPPNVHIHKTEKGGISVSLDQNSQISESMVREMCRIYGIHNGR
                     ITIRDPNLTADDLIDVLAGNRVYPHSIIVLNKIDLIDKKGLNAMIPFLGESVIPVSAN
                     SNLNIEILKESIFKKLEFIRIYMRPKGKETDYEEPLIVRKGTKVKDICAKLHRTLLRD
                     FRFALVWGKSVKFAGQKVGLDHVLDDQDVLTIIKKISAI"
     gene            complement(2260..>2595)
                     /locus_tag="VLA74_03340"
     CDS             complement(2260..>2595)
                     /locus_tag="VLA74_03340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49770.1"
                     /translation="DDIIVFNRPEGGDRVIVHRIIDMTDRFGEKIIVTKGDANQGLIP
                     GTDFPIREKDYIGTVAYVVPKVGLVLKYLNPPVNYIIIAGIVGVLIYTNFRKRNDEKD
                     KIEGKDSSL"
BASE COUNT          956 a          371 c          454 g          814 t
ORIGIN      
        1 ggaattgata aatccaatgt cccttctaat aatattattt gtcttcctaa tgatcctttc
       61 ttatcagccg aaaaattacg acttgagttt ctaaccaggt tggggataaa agtagggata
      121 attatttctg atagtaggtt aatgccaact aggattggaa ctacaggagt tgctatcggt
      181 tgtgcaggga tagaaccagt agaagatcaa agaggtaaca aagacttatt tggacatgta
      241 ttgaaatata cacttaaagc tactgcagat tcactagcta caatgggaac atttgtaatg
      301 ggagaaagca atgaatcaat tccaggtgtt gtgattagag gtatcaatat atcttttact
      361 gatagaaggc tttcatggaa agatttagct attgattatg agacagatat ttattttcgc
      421 agcatccaaa acttaaatcc tatcctataa taatagtata ttattttcat agcattttaa
      481 tatagccatg atctcaaaaa tttcaataac taaatgtctg aattccttac aagatatcca
      541 aaaaaaatga attttttaaa aggattacag gaatctatca aatctgaaga tatacaattt
      601 gatcatctca gtcttttggt taagacaaag aaagatgaaa ttattaaagc gctcatttta
      661 gagggattca ctaaagtaaa gtttgaaaat aaaaaaccag ggcagatcgg tcatggattt
      721 acaaagaaac taaaaaaacc atgggaaata catatcagat tacttaatat gcatcaggga
      781 ttaattgcaa ttcaaggaga agttgaaatt tcaagaaaat atattcaaca tatcagatct
      841 gtacgtgctc cagtaattta tgaaatagaa tcaattttaa aaaaacatag gatcgaatat
      901 aagatttgga atgataaggt acgtgattac atcacaaata ttattgaaaa tcatcaaatt
      961 attcttaatt caccaaaatt accagcaatg ccttggatat taatgataat ttttggttcc
     1021 atgattggct cattacatgg actaaaacta tttgggatct tttaaattaa attaaagaaa
     1081 ttcttttatg atgttatggt tagttattat tcataatata agatgggaat tccagagaaa
     1141 atcaaagaaa tagaggatga aattcataag actcagataa ataaagcaac ggaattccac
     1201 attggacttt taaaagccaa gattgcaaaa cttaaacgag aattagaaga aaataggcat
     1261 ggcaaaactg tctcggctgg caaaggcagt tctggatatg accttagaaa agaaggggat
     1321 gctactatag tgttaattgg ctttccaagt gtagggaaat caaccctatt aaattgtctg
     1381 actaatgcta attcaaaaat agcttcatat caatttacca cacttactgc tattccaggg
     1441 atgatggaat accgaggtgc aaaaatacaa gtaattgatt tacctggaat aattaagggt
     1501 gcagcttcag ggaaaggaat gggtaaaaaa gttctctcag tagctagaaa tgctgattta
     1561 gtattaataa ttgttgatgt atttcaacct aatcattatt cgatattgat aaaggaatta
     1621 tcggaaatag gtataaaggt taacaaaaaa ccaccaaatg ttcatattca caaaacagaa
     1681 aaaggaggaa tttcagtaag tttggatcaa aattcgcaaa tttcagaatc aatggtaaga
     1741 gagatgtgta ggatttatgg catacataat ggtaggatta caatacgaga ccccaatttg
     1801 actgctgatg atcttattga tgttctagct ggaaataggg tatatcctca ttctataata
     1861 gtcttaaata aaatcgattt gattgataaa aagggcctaa atgccatgat tccatttctt
     1921 ggagaaagtg tgatacctgt ttcagcaaat tcaaatttaa atattgaaat acttaaagaa
     1981 tccattttta aaaagttaga attcattaga atttacatgc gaccgaaagg aaaagaaact
     2041 gactatgagg aaccacttat agtaagaaaa ggaacaaaag taaaagacat ttgtgcaaaa
     2101 cttcatcgga cactgttgcg tgatttccgg tttgcgttgg tttggggaaa aagcgttaaa
     2161 ttcgcaggac aaaaagtagg acttgatcat gtattagatg atcaagatgt tttaacaata
     2221 attaaaaaga taagtgctat ctagataatt attttgtttt taaagggaag aatcttttcc
     2281 ttcaattttg tccttttcat catttctctt tctgaaattt gtataaatga ggactccgac
     2341 tattcctgct attataatat aattgactgg tggattgaga tatttcaaaa ctaatccaac
     2401 ctttggaacg acatatgcaa cagtaccaat gtagtctttt tctcttatag ggaagtccgt
     2461 tccaggtata agaccctgat ttgcatcgcc cttagttact attatttttt caccaaatct
     2521 atcagtcata tctataattc tatgaacaat taccctatca ccgccttctg gcctattaaa
     2581 tacgattatg tcgtc
//
LOCUS       DATIAS010000168         2325 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1938273, whole genome shotgun sequence.
ACCESSION   DATIAS010000168 DATIAS010000000
VERSION     DATIAS010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938273"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(305..919)
                     /locus_tag="VLA74_03345"
     CDS             complement(305..919)
                     /locus_tag="VLA74_03345"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF49771.1"
                     /translation="MYSLYLYFLGLSLRRTSKALVIFKDNKRSHVSVWNWIQRFAEYP
                     IYKRKIISAFIIDETVIQIGSHHFRLWFCIVPIHSSVLGIYISEERNMLVAKKFIRSL
                     VSNYGKHIVYTDGGTWYDEACEVIGLKHYLHSPFQKSLMERVNQYLKDRIESFDDYYP
                     CMQKDECNLLHVQNWIQFFVSMYNDTIANNNNDFELEEVNITLN"
     gene            1504..1632
                     /locus_tag="VLA74_03350"
     CDS             1504..1632
                     /locus_tag="VLA74_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49772.1"
                     /translation="MKVWYDTSYLNIYKKIWNDIQQPELHGTIDEEKIDQFGEYYV"
     gene            1695..2018
                     /locus_tag="VLA74_03355"
     CDS             1695..2018
                     /locus_tag="VLA74_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49773.1"
                     /translation="MYIKKRLDIKDEKEIRKRVELIANIAKAEYYEKVRKTLPEIIDI
                     AVNSAIGPKETIPEKDYDILVEKSLKEIKRLMIFYTLAEDKIVVKTLIRSKLREKMFY
                     SKTFK"
BASE COUNT          846 a          346 c          307 g          826 t
ORIGIN      
        1 tctgctttat tgttatatcc tctatcaata caggtaatac ttgagaatca tgtacttgtt
       61 cactagtaat atctaatgat aggattctct tccttttgat atcaactgct atgtgtattt
      121 tgagataacc tcttttttta ctttccattt atgtctaatc cattcacctc ttctgtttgt
      181 taccttgaga ccagtagtag aatcgattgc aagtacaaaa ttatcatcat tatgtaaatc
      241 agatttgtca gtatcatcta aagaaatctt gatatctaat ctatttattc ttctgctggc
      301 tttgttaatt taaggtaata ttcacctcct ctaactcaaa atcattatta ttatttgcta
      361 ttgtatcatt atacatggat acaaagaatt gtatccaatt ttgtacatgt aatagattgc
      421 attcatcttt ttgcatacat ggataatagt catcaaaact ttctattctg tctttcaaat
      481 actggttgac tctttccatc aaacttttct gaaatggtga gtgtaaataa tgttttaatc
      541 caattacttc acatgcttca tcataccatg tacctccatc tgtgtataca atatgttttc
      601 catagtttga tacaagagat ctaataaatt ttttagcaac aagcatgttt ctttcctctg
      661 agatgtatat tccaagcaca gaactatgaa ttggtactat acagaaccat aaccggaaat
      721 ggtgactacc aatttgaata acagtttcat ctattatgaa tgcagatatt attttacgtt
      781 tgtaaattgg atattctgca aacctttgaa tccagttcca tacagaaaca tgacttcttt
      841 tattgtcctt gaagatgact aatgccttgg aagtacgtct taaacttaga ccaagaaagt
      901 atagataaag agaatacata attacaatag tggatgtcct atttctctca aatgttataa
      961 ccataacatg agaaagggat attcacagct aaatccattt ccttaaatta acacagccag
     1021 taactttaaa taattacaat atatttaatt ccctatccta aaaccttttc atatttttac
     1081 tgttaaatgc tttttaattg tttaaaaaat ttcatttgat atattaaaaa ttatatattt
     1141 cttagaagac catatccaaa tataataata gatactttta atagtaaaat atattcataa
     1201 tctatactta tggattatat agttcttatc tttttcttaa ttctaatact attttcatta
     1261 aattttatct ttgcccaaga aacaaaagaa caacaggaaa taacagaaat acgtaaataa
     1321 ataaatacac ttaaagcaca attaaattct aattcaggat ctgaaacttt taatttatta
     1381 attactggta ttcttacaac aataagtgga ataggtatag ctgggtttac tgcttttttt
     1441 gcatggcaaa gagaaagaag aaagccactg ccagcacaag aagaagaaat tatacaaaat
     1501 attgtgaaag tatggtatga tacaagttat cttaatatat ataagaaaat atggaatgac
     1561 attcaacaac cagaacttca tggaacgata gatgaagaaa aaatagatca atttggagaa
     1621 tattatgtat aaaagatttt tcatttaaac atcttccata cctaaaaaag gagttagatg
     1681 aagaaggact tcttatgtac ataaaaaaaa gattggatat aaaagacgaa aaagaaataa
     1741 gaaaaagagt tgaactcata gcaaatattg ccaaagctga atactatgag aaagtaagaa
     1801 agactctccc agaaattata gatattgctg ttaattccgc cattggacct aaggaaacaa
     1861 ttccagaaaa agattatgac atattagttg aaaaatcact aaaagaaata aagaggttga
     1921 tgattttcta taccttagca gaagataaaa tagtagttaa aacattaata cgttcaaaac
     1981 taagggaaaa aatgttttat tctaaaactt tcaaataaca ttttcaaaat cttattaatt
     2041 gtacattgtt aaaattattg gtgatttatt taggttggaa cgaattcgaa tcctcttttt
     2101 aggtcaaatt tgtttcacat cccactgtga aagatacaaa attgtaacta atccttatct
     2161 tttgttgtag gattaattgt tgtacttact gacataggtt acaatttcat ttacacacat
     2221 gggtaacact ttttatctgc ttgattttct tgttaccatt atggttattt aatcttgttc
     2281 ctttcatgag aaacatttca gatggagtaa aaccattgat gccac
//
LOCUS       DATIAS010000169         4819 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1256490, whole genome shotgun sequence.
ACCESSION   DATIAS010000169 DATIAS010000000
VERSION     DATIAS010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4819
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256490"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..324)
                     /locus_tag="VLA74_03360"
     CDS             complement(103..324)
                     /locus_tag="VLA74_03360"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49774.1"
                     /translation="MEDVAIELHRCRAWAYKWYKRYNENGLDGLKDKERTGRPPTVPK
                     DVMVKIRSELAESNTAGWDFRQVRSYAVR"
     gene            complement(296..427)
                     /locus_tag="VLA74_03365"
     CDS             complement(296..427)
                     /locus_tag="VLA74_03365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49775.1"
                     /translation="MKASKLDVAYNREKDADVKERMLLVRRIVEDKKTHRRCSNRTT"
     gene            complement(1000..1131)
                     /locus_tag="VLA74_03370"
     CDS             complement(1000..1131)
                     /locus_tag="VLA74_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49776.1"
                     /translation="MIGYDDHKLYDLSTDIGSQLVCPVKRYENIPIERIELVEFYQS"
     gene            complement(1322..1780)
                     /locus_tag="VLA74_03375"
     CDS             complement(1322..1780)
                     /locus_tag="VLA74_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49777.1"
                     /translation="MDRNRLKDYLLFNRNILIGFAGAFLTSAGTSQVIARITSPIVNS
                     LISIAVETSIFLAIFGILFYFDNKDKFINEQGKRKEAAKVKWVLLKLASTLSIAEIEY
                     NTVKPAIHFWLLTLDYQPFIASTIASFISIIGYLVVADSMAYLTRLFKKL"
     gene            complement(1762..1893)
                     /locus_tag="VLA74_03380"
     CDS             complement(1762..1893)
                     /locus_tag="VLA74_03380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49778.1"
                     /translation="MVNLILSPLEKGSIRNSECCQVCENGSEHVFQAYRGANWIGID"
     gene            complement(2144..2320)
                     /locus_tag="VLA74_03385"
     CDS             complement(2144..2320)
                     /locus_tag="VLA74_03385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49779.1"
                     /translation="MYSLYLYFLGLSLRNTSNALVIFRDEKRSQLLYGIGYIGLVHAI
                     SITNTEKNICIHSK"
     gene            complement(3646..4173)
                     /locus_tag="VLA74_03390"
     CDS             complement(3646..4173)
                     /locus_tag="VLA74_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49780.1"
                     /translation="MLFRPLPTKGYATVGIKPAILLKLEKDTDEYYPGMFLPSALIII
                     MNEIKRGFYSVETNHLKIDYSGRYTSLTIRADVKTWLKENYEFHKEEYTQKYKTRNFT
                     QFASFFMLNMFKSKSKSHKYVVNIKESDFLWLQEEYKKKNEEYREKYSVYNFDQFADL
                     FIKDIFEKLNQTKKF"
     gene            complement(4308..>4819)
                     /locus_tag="VLA74_03395"
     CDS             complement(4308..>4819)
                     /locus_tag="VLA74_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49781.1"
                     /translation="LAISSVIARNLIQRDILRNLLKKSGLDDKKLLITTRSVTIPMMV
                     AGFLLGFTIPQPGIYLILAFDIAFAGAWAPLTLGLFWKKSNWPAAITSLVVGTSLRLL
                     MFFIIPPEYAGLDTMIPPPISFALFIIVALLTQKKYPGKERHGVKDYVPPEDDVVNGE
                     DLKGYVNTK"
BASE COUNT         1699 a          747 c          696 g         1677 t
ORIGIN      
        1 gttcatggca tctcggtgga ttcattttca tgagatgatt ggcggatagg tgttaaacca
       61 tgacagacaa gaaggatagt cgcacaggta aaacttcgtt attcagcgaa ctgcgtaact
      121 cctaacctgt ctgaaatccc atccagcagt attgctttct gctaattcgc ttcttatctt
      181 taccattaca tcctttggaa ctgttggtgg tctaccagtt ctttccttgt ctttcaatcc
      241 atctaatcca ttttcattat atctcttgta ccatttgtaa gcccaggctc tacatctatg
      301 tagttctatt gctacatctt cgatgtgttt ttttgtcttc tactatacgc cttacaagca
      361 gcattctttc ttttacatct gcatcttttt ctctattata tgctacatct aatttagatg
      421 ctttcaaata ttaaatgtct atatagataa cagtgagcta aaaatgtatc tacgaatttt
      481 agttagtcag tatagcagaa aacagaatta acaataagag atgcatttgt agactacaat
      541 cagaacagaa tacattctgc actgagatat cttacaccat atgagtttat ttctaactgg
      601 aaaaggtcag aagaaaagga gaaggtgata aatattggta atgaaaaata atatccataa
      661 aataatggga aaaatgttcc caaaaatagg ggtccactcc aaaaagtatt aagcaatatc
      721 taaataaatg aggttaggtc ataatcaagt gatcaagtat tattactcta ttgtgtaatc
      781 atcatgtccc tagcattatt tgattgctct tgggttatcc ttattagttt taaagttata
      841 gtagacaagt atctgatata gtaatattga caatagtact attcatgaag ccttgttata
      901 tcctcttaca ggtaagagat ctgttctaaa gacatatttg atatgttcta ttaacggttc
      961 aattgatttg catctccata aatagatagt ctgtgccagt taagattgat aaaattctac
     1021 cagttctatc ctttcaatag gtatattttc atatcttttt actggacaca ctaactgaga
     1081 tccaatatct gtgctgagat cgtatagttt atgatcatca tagccaatca ataaagtctt
     1141 taagaaaatt tatattttta ataactctaa gatatatcac cttttttaat aagacaaagt
     1201 ttttatcatt atatacctaa tccttaaaaa tttgaacaag aaatatagtc aaatttttta
     1261 catgaattaa tcttcaaaca aaagttcgga actttttatt gaatatttag ttggtgctat
     1321 cctatagttt tttaaataaa cgagtgagat atgccataga gtccgcaaca acaaggtacc
     1381 ctattatact gataaaactt gcaatggtcg aagcaatgaa gggttgataa tcaagagtaa
     1441 ggagccaaaa gtgaatagca ggttttacag tattgtattc tatttctgcg attgaaagtg
     1501 tggatgctag ttttaataaa acccacttca ctttagcagc ttcttttctc ttcccttgtt
     1561 cattaataaa cttgtctttg ttgtcaaaat agaacagaat accaaatatt gctaagaata
     1621 tactcgtttc aacagctatt gagattaaag aattaacaat cggggacgta attcttgcta
     1681 tcacttggct agttccagcg ctagtaagaa atgcaccagc aaagccaata agaatatttc
     1741 tgttaaataa aagatagtct tttaatcgat tcctatccaa ttagctcccc tatatgcttg
     1801 aaaaacatgt tcactaccat tttcacatac ttggcaacat tcactatttc ttatagatcc
     1861 tttttcgaga ggacttaata ttaagttcac cattattata aaataaaaaa tccatacttt
     1921 gcaataagat agaaaaatta aaagttaaaa aagataataa tgtaccaagt atctccatct
     1981 gtatacactg tatgttttcc atatttgtca actagggatc taatgaaatt ctccgctaca
     2041 tacatgtttc ttgtgaaata tgcaccctag tatagttcta tgaactgatt cgattgcaat
     2101 ccacaaccag cttaaacgat gatttccgat ctggataatt gtttcattta ctatgaatgc
     2161 agatattctt ctctgtgttt gttatagata ttgcatgaac caaacctatg tatccaatcc
     2221 catacagcaa ttgacttctt ttttcatctc taaagataac taatgcatta gatgtatttc
     2281 ttaaactcaa accaagaaag tacaaataca aagaatacat tacaataaca gtggatgttc
     2341 tttatttctt tcaaagttaa attatcatat cagaaataga gcattcacag ctaaatctat
     2401 ttccttaaat taacaagccc tctaaatata tgatgtaaaa atactacctg aattagtaga
     2461 cgttatcata ataaataata ataagataat agttactctg ctattattta tggatggtgt
     2521 ctatgatgat gatagtaaca ggaattttca actattatca tttaagggaa ttaaaccaag
     2581 cagcaataaa agtaagaaag aattccagag gtagaaagac cacaatcact atcttagaaa
     2641 caagacttta gaatcataga aaaccaatct acaacaatgg aaagatagca taagcaatgg
     2701 tcagagatag tagagatagc agaaactatt ttcttttgat acaagagaat gtttgttaga
     2761 taatatgcta ctgctattag gtttgagaac atgataaagg agataatgct gaaaatgtcg
     2821 gtatataact ggtttcaaaa gataactatc aaatgattgc ttcttaaatt agaataaaaa
     2881 ctataatcca aacgagtagg gcaacaaaac aggaagctat gtttttgtag catggatcac
     2941 aaaaaataaa ttccaaccag aaatagaaag agaaatagaa aaacagaagt aacaagaaaa
     3001 tgaattcaaa gctgaagtca aaatgaaata acatgacaaa atttattttt ttgaatttta
     3061 tacaattatg caatttatct caaaataacc tgttcaattt atagaaggaa tgttaaactt
     3121 ttcgattatg ttgcgtgctt aatcttagaa ggtcttttca acttgagaca aaattttctt
     3181 tgacttaaag cctatcccaa aaataataga agaaaaagag gtaaaaatgc agaggatatt
     3241 ctatacctga aattttcttt ctataatttt ttttgtaatt aacaaaaaca gctactaaaa
     3301 atgaatcata tattatcaca atgactgtta tttgaaaata atctatttga aaagaatcgg
     3361 gctataaaca aagaaacaat tgaaacattt cttcttttta ataatcaagt atagagttat
     3421 atgaatttga gtatactatt gaaaaaatct gttcaataaa taaaagaaaa tagagaatta
     3481 tattttgttc ttgtgtaacc cgataatagt aaaattgttt atagatggtt aattttggga
     3541 taggctctta atagatgaaa actaattaat atcacaattt aaggaaataa attgataaaa
     3601 tttaattgaa ttttctatta acaacaatta gtaactgtta ccaggttaaa atttttttgt
     3661 ttggttaagt ttttcaaaaa tatctttgat aaaaaggtca gcaaattgat caaaattata
     3721 tacactatat ttttctctat attcttcatt cttttttttg tattcttcct gtagccaaag
     3781 aaaatctgac tcctttatgt ttactacata tttgtgcgat tttgattttg atttaaacat
     3841 atttaacata aagaaacttg caaactgtgt aaaattcctt gttttatatt tttgtgtgta
     3901 ttcttcctta tgaaattcat aattctcctt taaccatgtt ttaacatctg ctctaatagt
     3961 taaagatgta tatcttccag aataatcgat cttcaaatga ttagtttcca ctgaataaaa
     4021 accacgctta atttcattca ttattattat cagtgcacta ggtaaaaaca taccaggata
     4081 atattcatct gtatctttct ccaattttaa gagaattgca ggttttatcc cgacggtagc
     4141 ataccctttt gtaggcaatg gtctaaataa catcgtctat tattaatttt ttcttagaaa
     4201 aaggattgta gataattgct aatttagtta gtaccaaact tttttatctt ttttttatga
     4261 tttatagtca gtaagtcaat ctgtcatctt tactcatctt ttattcttta cttggtattt
     4321 acatatccct ttaaatcttc cccattaacg acatcatcct caggtggaac gtaatctttg
     4381 actccgtgtc tttcctttcc tggatatttt ttctgggtaa gtaatgcaac tattatgaat
     4441 aatgcaaaag atataggagg tggtatcatg gtatctagac cagcgtattc aggtgggatt
     4501 atgaaaaaca tcaataatct tagagacgtt cctacaacca acgatgttat tgctgcaggc
     4561 caatttgatt tcttccagaa cagacctaag gttaaaggag cccaggcacc agcaaaagca
     4621 atatcaaatg ccaagattag atagatacct ggttgaggga tggtaaatcc taaaagaaaa
     4681 cctgctacca tcattggaat ggtaactgat cgagttgtta tcagtaattt tttatcatct
     4741 aatccagatt tttttaataa atttcttaaa atgtctcttt gtatgagatt tctagctata
     4801 acactagata ttgctaata
//
LOCUS       DATIAS010000170         4269 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_984579, whole genome shotgun sequence.
ACCESSION   DATIAS010000170 DATIAS010000000
VERSION     DATIAS010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4269
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_984579"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..364
                     /locus_tag="VLA74_03400"
     CDS             167..364
                     /locus_tag="VLA74_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49782.1"
                     /translation="MIKKITQTSHILGLGIDISKSKANIWLKEDSKVLKNFIVTNNEE
                     GIIMLINKLEKYINININNNQ"
     gene            548..943
                     /locus_tag="VLA74_03405"
     CDS             548..943
                     /locus_tag="VLA74_03405"
                     /inference="COORDINATES: protein motif:HMM:NF024668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4062 domain-containing protein"
                     /protein_id="HSF49783.1"
                     /translation="MAKDLYLLYLEDLKEYREAVSHALRKVKAEVIAMENYVAQDQRP
                     LQKCLEDVASSDIYIGIFALKYGYIPKEDNPDCLSITELEYHKAKENGIPTLIFLLEE
                     KVVGHHNILMAQHFLKQKMQKKFLNYVMN"
     gene            985..3222
                     /locus_tag="VLA74_03410"
     CDS             985..3222
                     /locus_tag="VLA74_03410"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF045198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HSF49784.1"
                     /translation="MASNVLAAVKSIDIGSSPDSIRDDSQVSKIKTPDQLASYYNVDP
                     QRVVKIRNSNLSEIKSWVKNWNQKQEIVVSVGHDTSISKSISSASDRESTKPILLITG
                     DPGAGKSWLAYRLVSELMENDHYSISVINGTNIRKQLFVKSNNFMEKDDNKKELANRS
                     VFILDDIGTSVGVVSSSITLEDIYEIIKSILPGGLEQVFTAPIILSIREENWNYIVNG
                     LESKAELDEYKLKEMVKKVVLLNLEYRESEKIVESFYKVVDEKKPPYPNIVIKKEVKD
                     KIIEKSRGIPFIIKLFFHQMNSMIDHNQRYAVKLEEAEYIISNAKYYALKQFFNYYPI
                     SNNDKEQVTNVLSFLYFIAKNGSISIGLLDYLREKLEESVPNYFKEYLYSLRYEKSFP
                     LFNIDNYGIILPFHTSIIEAIINLVENPEELEAEVPFEYENIKEKIREIIDIDIGIDI
                     KEKAENNFLKRYMNFVTDSLDHYLEKRLNREIERRRKISAKSTYNFLSIYIEFLNRRK
                     ELDSGWPKKDLDFGSEIENKYRNILKELLEKTTIDYGNLEINIHEQLFWIFTRRYWFF
                     YKYKFLRQYYLKFLSSNNNNVKVKTWKQVPDLLSRKILTAEEIMAFKEHFLDLLNNND
                     EKIREQAWNGWHISELIRENIVTVEEMRSIKNKFFEILQSNQEEVRIAAWQSLSYYYS
                     NLIRNKIITRDDHITFLHLLQIANESARAEAWNSLTFLIQEHIIKTEEIFQFKIISLI
                     YCKVR"
     gene            3207..4139
                     /locus_tag="VLA74_03415"
     CDS             3207..4139
                     /locus_tag="VLA74_03415"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49785.1"
                     /translation="MQSKIDNIREKSWMKTFELVQNKILKPEEIVPFKDYFFELLQNT
                     NDNVYDTWSYSIDELVKSKILTLKESIFFYDKALEIDAKNTGAWNGKGNVYYDLKQYD
                     EALKYYDQALEIDPKYTSALNGKGDVYRNLKEYDEAIKCYDQALEIDARNTNAWNYKG
                     DVYYDLKQYDEALKYYDKALAIDLTRISTLINKANSLHYLQKYDEAIEYYDKALAIDP
                     SDIDDLNGKAISLQSLQKYDEAIQYYDKALAIEPLNVRILNGKAAAFKDLQGYDEALQ
                     YFDKALAIEPSNFIALGNKATILATQEKYDEAIE"
BASE COUNT         1708 a          570 c          684 g         1307 t
ORIGIN      
        1 cgttggctat gcccgtcaca tccatggtta atctcataag agcaacaacc gagtgaatga
       61 atgggctatc tatcttaagc ggcttctcta attgtgctta gcgcacgtat agctggttgc
      121 tgttgcataa tagccaataa aaataaaaaa aaaggagtgg aaggaggtga taaaaaaaat
      181 aactcaaact agtcatatat taggtctagg aatagatata agcaaaagca aagcaaatat
      241 ctggctaaaa gaagattcaa aagtactgaa aaactttatt gtgactaata atgaagaagg
      301 tattatcatg cttatcaaca aacttgagaa atatatcaat atcaatatca acaacaacca
      361 ataagaattt tgactcattt tatgttgtgc aataaccttt tttattttta ctgtaaactt
      421 aaaggtaatc taataatatt atatatcttc tcttaatttt tcccattatt cttagaaaat
      481 taagatcaca gaaacgataa taaaaatatc caaaataata aatacatttt attataagat
      541 agttataatt gccaaagatc tatatctcct ctaccttgaa gacctaaaag aatatcgaga
      601 agctgtttct catgcattga gaaaggtaaa agcagaagta attgcaatgg agaattatgt
      661 tgctcaggat caaagacctt tacaaaaatg tttagaagat gttgcttcat ctgatattta
      721 cataggtata tttgccttaa aatatggtta tattcctaaa gaggataatc ccgattgttt
      781 atctattacc gagttagaat atcataaagc taaagaaaat ggtattccta ctttaatttt
      841 cttattagaa gaaaaagtag ttggccacca caatatattg atggctcagc attttctcaa
      901 acaaaaaatg cagaaaaaat ttctaaatta cgtaatgaac taaaagaaga gaaactgata
      961 gccttcttta aaaataaaga tgaattggca agtaatgtat tagctgcagt aaaatcaata
     1021 gatataggat catcgcctga ttctatacgt gatgattcac aagttagcaa gatcaaaact
     1081 cctgatcaac tggcaagtta ttataatgtt gaccctcaaa gggttgtaaa aatcagaaat
     1141 tcaaatcttt ccgaaattaa atcttgggta aaaaactgga atcaaaaaca ggaaatagtc
     1201 gtaagtgttg gtcacgatac aagtatatct aaatcaatat catctgcttc agatagagaa
     1261 tcaaccaagc ccattttgct tataacagga gatccaggtg caggtaaaag ctggttagca
     1321 tatagacttg tatcagaatt aatggaaaac gatcattata gcatatcagt aataaatggt
     1381 actaatattc gtaaacaact atttgttaaa agtaataatt ttatggaaaa agacgataat
     1441 aaaaaggaac ttgccaacag atctgtgttt attcttgatg atataggtac aagtgtagga
     1501 gtagttagct cttctattac attagaagat atctacgaga tcataaagag tatattacct
     1561 ggtggtttag aacaagtttt tactgcgcct attatacttt ctattagaga agaaaattgg
     1621 aattatatag taaatggatt agaatcaaag gccgaactag acgaatataa attaaaagaa
     1681 atggtaaaga aagttgtatt actcaatcta gaatatagag aatccgaaaa aatagtagaa
     1741 tctttctaca aagttgtgga tgaaaagaaa cctccttatc ctaatatagt tattaaaaaa
     1801 gaagttaagg ataagattat tgaaaaatca aggggaattc cattcattat aaagttattc
     1861 tttcaccaaa tgaattccat gattgatcac aatcaaagat atgctgtaaa attagaggaa
     1921 gcagagtata ttatcagcaa tgcaaaatat tatgcattaa agcaattttt taattactat
     1981 cctattagca ataatgataa agaacaggtc acaaatgttc tttcctttct atattttata
     2041 gcaaaaaatg gatccatttc tataggactt cttgattatt tgagagaaaa attggaagag
     2101 agtgttccaa attactttaa agaatatctt tattctttga gatatgaaaa atcttttcct
     2161 ctatttaata ttgataacta tgggattata ttaccttttc ataccagcat aatagaagca
     2221 ataattaatc tagttgaaaa tcctgaagaa cttgaagctg aagttccttt tgaatatgaa
     2281 aatatcaaag aaaaaataag agaaataatt gatattgata tcggtatcga tattaaagaa
     2341 aaggcagaaa ataacttctt aaagcgatat atgaattttg taactgattc attggatcat
     2401 tatttagaaa agaggttaaa tagagaaatc gaaagaagaa gaaaaatctc tgctaagagt
     2461 acctataatt ttttatcaat atatatagaa tttcttaata gaaggaaaga acttgattct
     2521 ggttggccaa agaaagacct tgattttggt tcggagattg aaaataagta tagaaatatc
     2581 ttaaaagagc ttttggaaaa gacaacaatc gattatggta atttggaaat caacatccat
     2641 gagcaactat tttggatttt tacaagaaga tattggtttt tctataaata taagtttctt
     2701 aggcagtatt atcttaaatt tttatcatca aataacaata atgtaaaagt aaaaacatgg
     2761 aagcaagttc ctgatttact ttcacgcaaa attttaacag ctgaagaaat aatggccttt
     2821 aaagaacact ttttagatct tcttaataat aatgatgaaa agatcagaga acaagcctgg
     2881 aatggatggc atatatcaga attaataaga gaaaacatag taacagtaga agagatgaga
     2941 tcaataaaaa ataaattttt tgaaatatta caaagtaatc aagaggaagt aagaatagct
     3001 gcatggcaat cactatctta ctactatagt aatttaatac gaaataaaat cataactaga
     3061 gatgatcata ttacttttct tcatttactt cagattgcaa atgaatctgc aagagctgag
     3121 gcatggaatt cattaacttt tcttattcaa gaacatatta taaagactga ggaaatattt
     3181 caatttaaaa ttatttcttt gatctattgc aaagtaagat agataatata cgagaaaaat
     3241 cttggatgaa gacctttgaa ctagtacaaa ataaaatact aaaacctgaa gaaatagtac
     3301 cattcaaaga ttatttcttt gagctattgc agaatactaa tgataatgta tatgatactt
     3361 ggagttattc tattgacgaa cttgtcaaaa gtaaaatact aactctaaaa gaaagtatat
     3421 ttttctatga caaagcctta gagattgatg caaaaaatac cggtgcttgg aatggcaaag
     3481 gcaatgttta ttatgattta aaacagtatg atgaagctct aaagtattat gaccaagcct
     3541 tagagataga tccaaaatat acatctgcat taaatggcaa aggcgatgtt tataggaact
     3601 taaaagagta tgatgaagct ataaagtgct atgaccaagc cttagagatt gatgctagaa
     3661 ataccaatgc ttggaattac aaaggtgatg tttattatga tttaaaacag tatgatgaag
     3721 ctctaaagta ttatgacaaa gccttagcta ttgatttaac acgtattagt acactcatta
     3781 acaaagccaa ttctctacac tatttgcaaa aatatgatga agctatagaa tactatgaca
     3841 aagctttagc tatagatcca tcagatattg atgacctaaa tggcaaagcc atctcgttac
     3901 aatctttaca aaaatatgat gaagctatac agtactatga taaagccctt gcaatagaac
     3961 cactaaatgt taggatacta aatggcaaag ccgctgcttt taaagattta caaggatatg
     4021 atgaggcttt acagtacttt gacaaagcac tagctataga accatcaaat tttattgcat
     4081 tagggaacaa agctactatt ttagcaaccc aagaaaaata tgatgaggcc atagagtaat
     4141 atgacaaact tttaactata aatccatcag atatcaatac cattatagga aaaggtctcg
     4201 ctttaaaaga tttacaaaag tatgatgaag ctataaaata catcgacaaa ggactagcta
     4261 gagatccta
//
LOCUS       DATIAS010000171         3165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_167291, whole genome shotgun sequence.
ACCESSION   DATIAS010000171 DATIAS010000000
VERSION     DATIAS010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167291"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..1232
                     /locus_tag="VLA74_03420"
     CDS             264..1232
                     /locus_tag="VLA74_03420"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HSF49786.1"
                     /translation="MEIQQSKRLREHYWNNLLIAVDQKKCIPFIGESSLEFFNQVDNK
                     EFLTNNELAEIWAKDPEFDYPLEPPYQLPKVAQFLAIKEADETFPKITISNILKEKKI
                     PAFDSDKYKRSPHSILADLHLPIYITTNYDLLMEKALESQGKEPVSEFCRWNDELRNV
                     ELIPTVFDNKTNYEPKPSTPLVYHFHGSIDFPASIVLTERDFFAFVINTNREQEQQNI
                     IPAFLRRELVKSTLLFIGYSLEDIVFRSIFQGALSFMSNAPRNANNIAVIQLPSNQND
                     ILKKQKIQQYLEKYTANMFKVVVYWGDTNEFIEELQIKWKAFKNKH"
     gene            1249..>3165
                     /locus_tag="VLA74_03425"
     CDS             1249..>3165
                     /locus_tag="VLA74_03425"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49787.1"
                     /translation="MYNRINNFNNKGFYNSLNHLNKDILEPYIGPRPFNRTLEDQKKF
                     FGRDYESREIISLIISHKLVLIYALSGAGKTSIFNGQIIPILEKYDGCNVLPVTRVKS
                     LNIASSYLDVENLANYDNITNLYIYNALHNLKPELDSDLLKDKSLSEFLQEYFPIQKD
                     ENDNYIPQILIFDQLEEIFDIFPNNWQEQRKDFFNQVATALKIIKPLQSVFIIREDYL
                     AQLDPYSSLLPEKLRPRFRLEKLREDAALLAIKGPLENISEKFIQNNLGNIEEYIKSI
                     IKELMKIRVESTAGQTYQVDGEFVEPIQLQVVFKRWWEKIMDYNGKNIQQRKINVIDV
                     DNALEDFYEESINEVIKETEISEDQIRKWFEQNLITSSATRNIVHRGFKSTAGLQNNA
                     IDILKKKYLVKENWLAGSRWYELIHDRLINPIKLSNQRWKEENEKRKKSLAKKILIPS
                     SSAVVIFIIFFTIWHNNLYIIEPVESIPAGSLPFIVSVDQNTGLVYVTNPKSDTVSVI
                     NGKRNDPMTTITVSDEPTAIAVDSNNNLVYVANSGNNTVSVINETNNKIINGTISIGS
                     IDVRDGTTELAVDEENNFVYVVNNLSTDIQIIDIQLIKESLDRYNGIINKNIGYIITT
                     IPVGNSSSDIAINPN"
BASE COUNT         1250 a          429 c          473 g         1013 t
ORIGIN      
        1 agatggtata atgacattca tgatgacact tgacttacaa aatttattta tctaatatga
       61 ataatttata gatcaaatta tttcattatt ctcaaaaacc tattctcaaa aaatttaaaa
      121 atcttaacat tatatactat attagataat gaatatgatc aataataaaa aaaaagtgtt
      181 tattagttat gaagataatg atgctgtaat gtctaattgt ctatttaatg attaagagtt
      241 tgaggaggct ggaactaatg acaatggaaa ttcaacaatc taaaagatta cgtgaacatt
      301 attggaataa tttactaata gcagtagatc aaaaaaagtg tattcctttt ataggagagt
      361 catctctgga attctttaat caagtagata ataaagagtt tttgactaac aatgaattag
      421 ccgaaatatg ggcaaaagac ccagagtttg attatccttt agaaccacct tatcaattac
      481 caaaagtagc acaattttta gcaataaagg aagcagacga gacttttcct aaaattacta
      541 ttagtaatat acttaaagaa aagaaaatac ctgcttttga ctcagataaa tacaaaagat
      601 ctccacactc aatacttgct gatctccatc ttccaatata catcactaca aattatgatc
      661 ttttaatgga aaaagcatta gaaagtcaag gaaaagaacc tgttagcgaa ttttgtagat
      721 ggaatgatga attgagaaat gtggaactta ttccaaccgt attcgacaac aaaactaact
      781 atgaaccaaa accgagtaca ccattagtat accattttca tggtagtatt gattttcctg
      841 catctattgt tttgaccgag cgagattttt ttgcgtttgt aattaatacc aatagggaac
      901 aggagcagca gaatataata cctgcatttt tacgtagaga actagttaaa tcaacactat
      961 tatttattgg atatagttta gaagatatag tttttcgttc aatatttcaa ggagccctta
     1021 gttttatgtc gaatgctcct aggaatgcaa ataacatagc agtaatacaa cttccttcta
     1081 accaaaatga tattctaaaa aaacaaaaaa tacaacaata cttagaaaaa tatactgcca
     1141 atatgtttaa ggtagtagtt tattggggag ataccaatga atttatagaa gaattacaaa
     1201 tcaaatggaa agcttttaaa aataaacact agtgaatggt cgttatatat gtacaataga
     1261 ataaataatt ttaataacaa aggtttttat aattcattaa atcatttaaa taaagatatt
     1321 ctagaacctt acattggacc tcgtccattt aatagaacgt tagaagatca aaaaaaattt
     1381 tttggcagag attatgaatc tagagaaatt atatctctta ttattagcca taaacttgtt
     1441 ttgatatatg cactatcagg agctggaaaa acatccatat tcaatggaca aataattcca
     1501 attttggaaa aatatgatgg atgtaatgtc ttacctgtta cgagagtaaa gtccttaaat
     1561 attgcttctt cttacttaga tgtagaaaat ttagctaact acgataatat aacaaatctg
     1621 tatatataca atgctttaca taatttgaaa cctgaactag attccgattt acttaaagat
     1681 aaatcattgt cagaattctt acaagaatat tttcctatcc aaaaagatga aaatgataat
     1741 tatatcccac aaatactaat atttgaccag ctagaagaga tctttgacat ttttccaaat
     1801 aattggcaag aacaaagaaa ggatttcttt aaccaagtag ctactgcttt aaagataatt
     1861 aaaccacttc aaagtgtctt tattattaga gaagattatc tagcacaatt agatccttat
     1921 agcagtcttc ttcccgagaa attaagacca cgatttagac tcgaaaaatt acgtgaagat
     1981 gcagctttat tagcgatcaa aggaccactg gagaatattt cagaaaaatt tattcaaaat
     2041 aatttaggta atattgagga atatataaaa agtataatta aggaactaat gaaaattcga
     2101 gtggaatcta cggctgggca gacatatcaa gttgatggtg aatttgtaga accaattcaa
     2161 cttcaagtag tatttaaaag atggtgggaa aagataatgg attataatgg taaaaatatt
     2221 caacaacgta aaatcaatgt gattgatgtt gataatgcat tagaagactt ttatgaagaa
     2281 tctataaatg aggtgataaa agaaactgaa atttctgaag atcaaattag gaaatggttt
     2341 gaacaaaatt taatcacatc gtctgccact cgaaatattg ttcatagagg cttcaaatca
     2401 accgcaggcc ttcaaaacaa tgccattgac attcttaaaa aaaagtattt agtaaaggaa
     2461 aattggcttg caggctcaag gtggtatgaa ttaatacatg atcgtttaat taaccctatt
     2521 aaattatcaa atcaaagatg gaaagaagag aatgaaaaaa gaaaaaaatc attagctaaa
     2581 aaaattttaa ttccatcatc tagtgctgtt gttattttta ttatattttt tactatatgg
     2641 cataataatc tctatattat tgaaccagtt gaatcaattc ctgctggaag tttgcctttt
     2701 attgtgtctg tcgatcaaaa taccgggtta gtatacgtaa caaatcccaa atctgatacc
     2761 gtctctgtaa taaatggaaa aagaaatgat cctatgacaa ctataactgt ttcagatgag
     2821 ccaacagcta tagcagtaga ttcaaataat aatttagtat atgttgctaa ttctggcaat
     2881 aatactgtat ctgtaataaa tgaaacaaat aataagataa ttaatggaac tatatctatt
     2941 ggatctatag atgttagaga tggtacaacc gaattggcag ttgatgaaga aaataatttt
     3001 gtatatgtag taaacaatct atctactgat atacaaatta ttgatattca attaattaaa
     3061 gagtctttag atagatataa tggaataatt aataaaaata taggatatat aatcactact
     3121 attcctgtag gcaattcttc ctctgatata gctatcaatc caaac
//
LOCUS       DATIAS010000172         2255 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_711421, whole genome shotgun sequence.
ACCESSION   DATIAS010000172 DATIAS010000000
VERSION     DATIAS010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711421"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            355..1146
                     /gene="murI"
                     /locus_tag="VLA74_03430"
     CDS             355..1146
                     /gene="murI"
                     /locus_tag="VLA74_03430"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HSF49788.1"
                     /translation="MSNTPIMVFDSGIGSMSIIKELRRELPNENLLYFADRANFPYGN
                     KSHKRLLEIMKNTIKYLERFKPKIIIIASNTPSIQILDEIKDEVNVPLLGVRPPLRES
                     VKLTKNNHIGIMATESAINSKEIDKQINDEIPQKIFVNKYNASPLIALIENGDFIKSR
                     KKIRKQIHRILGNIEDIDVITLSSTHLPFIVDQLSEEFPSVKFIDSAKTTAKNVKQIL
                     TYNGLRNKNNTGRMRILVSDGKDEFQEMLRYLGIKENVQEVFWSI"
     gene            1217..>2255
                     /locus_tag="VLA74_03435"
     CDS             1217..>2255
                     /locus_tag="VLA74_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSF49789.1"
                     /translation="MIRKIRLGIDVGGTFTKAVAIDILTGELLGKMTVPTTHNADNGV
                     AEGIVLALKNLMETYSIQKSEIELISHSTTQAVNALLEGDTAKVGIIGMGVGLEKSNV
                     VKRTNIKNIELSSNKYLHTCFRFLDTSKYLEKEEVEEIISSLKNEGAEVLVVSEAYGV
                     DDPSNEQYVMLYSDLPITGGHELTGIYGLEIRTLTAAINAGIMPKSISTARYVESAVR
                     NENIICPIMIMKGDGGVTDIETFKNKPILTILSGPAASVAGALLHSHILHGVFIEVGG
                     TSTNISIIKNGKPEIRYVTIMDHPTCIRSVDVRVAGVAGGSLIRISGKKIIDVGPRSA
                     HIAGLRYSCFVD"
BASE COUNT          841 a          304 c          437 g          673 t
ORIGIN      
        1 actcaagtaa ttaatgaatg aagaatttag tccttaagag aacaaatggg atttgcttca
       61 aaataggcta aattaataaa agttgaagct catccgactt ttattgaatt tagtttctat
      121 tatgaagaaa aggtcctttt aatagctgca actttttctt tgacaaaaat attgcaggtt
      181 gtttgggttt aaaaaagtat aaacatatat tccattgaat ctatacaaac aaattacata
      241 aggtttacaa ggaaaattat tttttgttgg taacaccatt acagactata tttagcaaaa
      301 tatcagacta gtgaggaagt aatattaata cgtcctttgt ttgtttttta taatatgtca
      361 aatacaccta tcatggtttt tgattctgga ataggttcta tgtctataat caaggaacta
      421 agaagggaat taccaaatga aaatttatta tatttcgcag atagagcaaa ttttccatat
      481 ggaaacaagt cacataaaag acttttagaa attatgaaaa atactattaa atacttggag
      541 agattcaaac caaagataat aataatagct tccaataccc cttcgattca gattttagat
      601 gaaattaaag atgaagtgaa tgttccttta ctaggtgtga ggcctcctct aagagaatca
      661 gtaaagctaa caaaaaataa tcacatcgga ataatggcaa cagaatccgc tatcaatagt
      721 aaggagatag ataaacaaat aaacgatgaa attcctcaaa agatatttgt taataagtat
      781 aacgcatcgc cgttaatagc cctgattgaa aatggagatt ttatcaaaag cagaaagaag
      841 atcagaaaac aaattcatag aattctaggg aacattgaag atatagatgt tataacatta
      901 tcaagtacgc atcttccttt tatcgtggat caattatctg aagagttccc atctgttaaa
      961 tttatcgatt ctgcaaaaac gacagcaaaa aatgtaaaac aaattttgac atacaacgga
     1021 ttacgtaata aaaataacac tggaaggatg agaattcttg tatcggatgg aaaagatgaa
     1081 tttcaggaaa tgttaagata tttgggtata aaggaaaatg tacaagaagt tttttggtca
     1141 atttaggtaa tagtcaacga acaaaatata taatataaaa ttaatcaaat taggcaaacc
     1201 taatgtgtat taattaatga ttaggaaaat aagactcggc atagacgttg gagggacttt
     1261 cactaaagct gttgctattg atattttaac gggagagtta ttgggtaaaa tgacggttcc
     1321 cactacacat aatgctgata atggcgtagc ggaaggtatt gtactagcac ttaaaaattt
     1381 aatggaaacg tatagcatac aaaaatctga aatagaatta atttcacata gtactactca
     1441 agcagttaat gcgcttcttg aaggagacac tgccaaagtt gggattatag ggatgggggt
     1501 aggactagaa aagtctaacg ttgtcaagag gactaatata aaaaatattg aattatcttc
     1561 aaataaatat ctgcatacat gttttagatt tttagataca tcaaaatatt tggaaaaaga
     1621 agaagtggaa gaaataatat catcgctaaa aaacgaaggt gcggaggttt tggtagtgag
     1681 tgaagcgtat ggtgtggatg atcctagcaa cgaacaatac gtgatgttgt attcggatct
     1741 tcctataact ggaggtcatg agcttactgg aatttatggt cttgagatta gaactttgac
     1801 tgctgcgata aacgcaggca taatgccaaa gtcaataagt acggcaagat atgtcgagtc
     1861 tgcggtaagg aatgagaata taatttgtcc tatcatgata atgaaggggg acggaggagt
     1921 gacagacatc gaaactttca aaaacaaacc tattttgaca atactatcag gacctgcggc
     1981 aagtgtcgcg ggagcattat tacactctca tattttgcac ggagtattca ttgaagttgg
     2041 aggaacgtca actaatatct cgattataaa aaatggaaaa cctgaaattc gatatgttac
     2101 cataatggat catccgactt gtattcgttc agtggatgtc agagttgcag gagtagcagg
     2161 aggttcatta ataagaattt caggcaaaaa aattattgat gtaggtccta ggtcagctca
     2221 tattgctggt ttgaggtatt cctgttttgt cgatc
//
LOCUS       DATIAS010000173         3534 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_167381, whole genome shotgun sequence.
ACCESSION   DATIAS010000173 DATIAS010000000
VERSION     DATIAS010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3534
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167381"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            712..1461
                     /locus_tag="VLA74_03440"
     CDS             712..1461
                     /locus_tag="VLA74_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49790.1"
                     /translation="MQTNDYLIDTIANQGHNKGELTPYLMFKYAIKTEITRKYYERRL
                     KKFFDFIKFEIVANKDIEFRCNKFAEKSKGNINWALSQIIRFLQYQKERVENKEITSG
                     TLKNFVKSLKVFCEMADISIPWKKITRGLPNARQSGNDRAPTIEEIKKLLEYPDRRIK
                     PIVYTMISSGIRLGAWDYLKWKHIIPIKDEKEVIAANIIVYAGEHDEYYSFITPEAYN
                     SLVDWIKFREEYGKKVIEESWLMRDIWKQLM"
     gene            1443..1994
                     /locus_tag="VLA74_03445"
     CDS             1443..1994
                     /locus_tag="VLA74_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49791.1"
                     /translation="METTNVNYGAKWGLATCPKKLNSYAIKRIFERGLWSQGLRKTLE
                     NGEKRHEYKAAHGFRKFYKTRTEQVMRPLNVEITIGHDIGLSGSYYKPTEKEVLEDYL
                     KAVDLLTINNNQKVLEKQIIELKENSKDNEYIIKAKLHEKDEQIQELKKNDKVKEDAL
                     ASLSDQLLYLTERIQEIERKQSK"
     gene            complement(2172..>3534)
                     /locus_tag="VLA74_03450"
     CDS             complement(2172..>3534)
                     /locus_tag="VLA74_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49792.1"
                     /translation="SGELKIRIKQIQENDPFIFPLEVKVVYKSGKKEIKTIEIVNKDQ
                     DYKYTLPAGEDQIRWISVDPEFKILKNIKKITIPNETSNFQLRELLKQQLLNGKTVIE
                     KVEAVREIRKHYSEDILEVLKEIIKSSVFYGIGVEVSNTIGAFKDDSDWTKTKNAYET
                     LKACLEDDVFSTLPPQVKQSIVSNIGRFQMEESIPKIKSILENSDESYFVRSSAATSL
                     ALSSIKSKSKEKKLETINILKNLVNTSNSFRQVIAAGAINGLMEFYNDSDPNIVLDIG
                     TFLIDKTTTNTNNNFYIQIAAINAIRKFVRTKNHLDKRNIIDLNQCVFNRLIELLDVK
                     SLDNSRWQVKIRAATSLVDSDALSSIPDDKTFRTMNTLISAVQYDVNGFVQKSIERSL
                     YVLRDHLKKWIDNPPTIEFKRQVDTIEKEEQKIAMEPIELTQSEKATEEKILKSIRTL
                     NLP"
BASE COUNT         1291 a          463 c          550 g         1230 t
ORIGIN      
        1 gatatagtag aattatctcc tgcatttgat attaataata ttacttctaa tttagctgct
       61 cgattattta aagaaatatt aggctctatt attatataga ctaaattata atttagagtt
      121 ttattaatat taataattga ataaactatt ttataaagta ttagaactaa gtagatcaat
      181 ttttcggcgc agaccgaata tttcgcaaat tctcctaacg gggattctta tcgatattgt
      241 gaagtccata ttattataag aggatagaat actttttttt gttttaaata ttgaatacgt
      301 aaagtgtatt tattgcaggg aaaacaggtc aatataaaag tactctatat ctagatgttg
      361 acctgttaca taatattcat ggattggtaa aatcctcaga aattaatgaa aattggttga
      421 gaaagtaata ggacatgttg gtaatggttt aacaaacctt tgtacaaagg catcagctat
      481 tggacatata taactaattc aaaattgaaa caaaaatata ggttgaagct aatgattaat
      541 taaaataatt accttgaaat ataataataa aaaatgttaa tcagcttatc agtcaaatta
      601 tttcaaatta aaaaatatct ggtccctctt tatagaaggg ttcaaatccc actggcccca
      661 ttacaaacct gtgtctttat ttagacccat tgctatatag catgataaga aatgcaaact
      721 aacgattatc tgatagatac tatagcaaat caaggacaca ataaaggaga attgactcca
      781 tatctaatgt tcaaatatgc aattaaaaca gagattacca gaaaatatta tgaaagaaga
      841 ttgaaaaaat tctttgactt tattaaattt gaaattgtgg caaataaaga tattgaattt
      901 agatgtaata aatttgcaga aaaatcaaaa ggtaatataa actgggcatt aagccaaata
      961 attcgatttt tacaatatca aaaagagaga gttgaaaaca aagaaattac atctggaaca
     1021 ctaaaaaatt ttgtaaagtc attaaaagta ttttgtgaaa tggctgatat ttctatccca
     1081 tggaagaaga ttacaagggg attgccaaat gcaagacaat caggaaatga cagagctcct
     1141 actatagaag aaattaaaaa actattggaa tatccagatc gaagaatcaa gcctattgtt
     1201 tatacaatga tctcatcagg tataagacta ggtgcttggg attatctcaa atggaaacat
     1261 attattccta tcaaagatga aaaagaagta atagcagcaa atataattgt gtatgctggc
     1321 gaacatgatg aatattattc attcataacg ccagaagcat ataattcatt agtagattgg
     1381 ataaagttta gagaagaata tggcaagaag gttattgaag aatcttggtt aatgagagat
     1441 atatggaaac aactaatgta aactatggag ctaaatgggg attggcaaca tgtcctaaaa
     1501 agttgaatag ttatgcgata aagagaatat ttgaaagagg tttatggtct caaggcttaa
     1561 gaaagacact tgaaaatgga gagaaaaggc atgagtacaa agcagctcat ggttttcgca
     1621 aattctacaa gactagaaca gaacaagtaa tgcgtccatt aaatgtagag ataaccattg
     1681 gtcatgatat tggactttct ggttcatatt acaaaccaac agaaaaggaa gttttagaag
     1741 attatttaaa agcagtagat ttacttacaa taaacaataa tcaaaaagtt cttgaaaaac
     1801 agattattga actaaaagaa aatagcaaag ataatgaata catcataaaa gcaaaactac
     1861 atgaaaaaga tgaacaaatt caggaactta aaaagaacga taaagtaaaa gaggatgcat
     1921 tagctagttt atctgatcaa ctgttatact taaccgaaag aattcaagaa atagaaagaa
     1981 aacaatcaaa ataatattgt gaatatacta ggaaaagggt tctgtgggat ttgaaccctt
     2041 ctataaagtg ggaccagtta cttttttttg gttataaaat taatatttga actaataatt
     2101 gtaatgtgta ctttattagt tggtatttta ttatttcata aaaaatataa ttgtgagaat
     2161 aaataaaatt gttaaggcaa atttaatgtt ctaatggatt tgagtatctt ctcttctgta
     2221 gccttttcag attgtgttaa ttctattggt tccattgcta tcttttgttc ttctttctct
     2281 attgtatcaa cttgtcgttt aaattctatt gtaggtggat tatcaatcca ttttttgaga
     2341 tgatctctaa gaacatacaa agacctttct atactttttt gtacaaatcc atttacatca
     2401 tattggactg cagaaatcag agtattcata gttctaaatg ttttatcatc aggaatagaa
     2461 ctcaaagcat cggaatccac tagtgaagtt gctgccctga tttttacttg ccatctagag
     2521 ttatctaatg atttgacatc taataattct attaatcggt taaatacaca ttggtttaaa
     2581 tctatgatat ttctcttatc aaggtgattc tttgtccgta caaatttcct tatagcgttt
     2641 attgcagcta tttgtatata aaaattgttg tttgtatttg tagtagtttt atcaattaag
     2701 aatgtcccta tatctagtac aatatttgga tcagagtcat tatagaattc cattaagcca
     2761 ttaatggctc ctgctgctat tacttgtcta aaactattag aagtatttac gagattttta
     2821 agaatattta tggtttctaa ttttttttct tttgattttg atttgatact gcttaatgct
     2881 agtgaagtag cagcagagga tctaacaaaa taactttcat ctgaattttc aagaattgat
     2941 ttaattttag ggatagattc ttccatttgg aatctaccaa tgttagatac tatagattgt
     3001 ttaacctgag gaggtaaagt agaaaatacg tcatcttcta aacatgcctt gagtgtttca
     3061 tatgcatttt tagtttttgt ccaatcagag tcatccttaa aagcaccgat agtattagat
     3121 acttcaacac ctatcccata aaatacagat gattttatta tttctttaag aacctcaaga
     3181 atatcttctg aataatgttt tctaatctct cgtactgctt caactttttc aattacagtc
     3241 ttcccattta gtaattgttg ctttaacaat tctctcaatt gaaagtttga tgtttcatta
     3301 ggaattgtaa ttttctttat atttttaaga atcttaaatt ccggatctac ggaaatccat
     3361 cttatctggt cttcaccagc aggaagagta tatttatagt cttgatcttt atttacaatt
     3421 tctatagtct ttatttcttt ttttccagat ttataaacta cttttacttc taaaggaaaa
     3481 atgaaaggat cgttctcttg gatttgtttt attctgattt ttaattcacc ggat
//
LOCUS       DATIAS010000174         3970 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1256916, whole genome shotgun sequence.
ACCESSION   DATIAS010000174 DATIAS010000000
VERSION     DATIAS010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3970
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256916"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..617
                     /locus_tag="VLA74_03455"
     CDS             <1..617
                     /locus_tag="VLA74_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49793.1"
                     /translation="LDDILDLDELIEGRNTTDTWKNLKRFTEGLKRKSASNKAYIPIE
                     NTPHERHYIDYLNTEYNDEGETYLDFLEENRIELNTIMTQIGPKRFWNWLYSQIIKAF
                     PARKYYGRVIYVPPYKITLPVMDKLNKMVNKQIRDCTRDEEITISVELYKVKGLLNTQ
                     IKEEQIHERLIEIVANDENIIKFSEKLEQLINSSFNDVDWDKKE"
     gene            777..983
                     /locus_tag="VLA74_03460"
     CDS             777..983
                     /locus_tag="VLA74_03460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49794.1"
                     /translation="MEEKVICPTCKQLGYKSHVYAIDWKSSLEQIGGYYDEKGDYVKS
                     NVVPTTALSKTFWCTYGHFWMQTK"
     gene            complement(1154..1774)
                     /locus_tag="VLA74_03465"
     CDS             complement(1154..1774)
                     /locus_tag="VLA74_03465"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49795.1"
                     /translation="MRRIATKINKGQIIIMIINQNAKFIIIRPLIYLCECVIICQVSV
                     SDKIKLISKQQYEAQLQHVFRLVLENKSQEEIARELHISTRTVARYYQRIEQRYGEIQ
                     RQKTDNTLFLECQLFKNRMFHLYKILEKKAEDPKVNGNECAKCCEVAANIAIDVLKME
                     SEGIKAVKDALIAEKEATRRSSSAISSNSNNNVSDMMYYDELEESC"
     gene            2087..2938
                     /locus_tag="VLA74_03470"
     CDS             2087..2938
                     /locus_tag="VLA74_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49796.1"
                     /translation="MLDKKVGIFNAFIFFGIAALFFPATALENSIAYAQGEEMYPLPY
                     EKEERSSNGYYYNNDNYYEEEENNNYYTYNKDKIKNDPIVKIKKKLFVCENIQDATDS
                     FQCVETIIFPFPARPNSGQYIECTEELCPLIDESDFGAQIFKDVATVRALTPEGTPVN
                     LDKLHYSITEGALSEISNGIGLDICEPSGFSHSIYRQAFSQDTAFLYSICVNYVGDCN
                     GTIYPGEVKTCTVENYIWSGAFSQPGNAIDDTTTGTTTPNTNTQSSNTEGEIPNTALS
                     VPLDSIS"
     gene            complement(3449..>3970)
                     /locus_tag="VLA74_03475"
     CDS             complement(3449..>3970)
                     /locus_tag="VLA74_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49797.1"
                     /translation="SYLYPLMNHGYIDSIDSVIDKRAKIYYPLIETKKYINLFYSQEK
                     NNSSQEIKKIVVNSTRFPDQIYILSVLEPILKYYSTEGYITKIKGSKGEEITLEGLVD
                     QYFSNPEDYFELKNIENIESVQGEQQEQPQQQKEESEQSTEQQEIEPENETPEEKYNR
                     EQDEQKKWGDGLE"
BASE COUNT         1347 a          564 c          560 g         1499 t
ORIGIN      
        1 aattagatga tatactggat cttgatgaac ttatagaagg acgtaatact accgacacct
       61 ggaaaaatct aaaacgtttt actgagggtt tgaaaagaaa aagcgcaagt aataaggcat
      121 atatacctat tgaaaatacc cctcatgaaa gacattatat cgattacttg aatacagaat
      181 ataatgatga aggtgaaact tatcttgact tccttgaaga aaacagaatt gaactaaata
      241 caattatgac tcagatcggt cccaagagat tttggaactg gctttattca caaataataa
      301 aagcgtttcc agccagaaaa tattatggtc gtgttatata tgtgccaccg tataaaatta
      361 cattacctgt tatggataaa ttgaataaga tggttaataa acagataagg gattgtacac
      421 gagacgaaga aattaccatt tctgttgaat tgtataaagt caaaggtctt ttaaatactc
      481 aaattaaaga ggaacagatt catgaacgac taattgaaat agttgctaat gatgaaaaca
      541 ttataaaatt ctctgagaaa cttgagcaat tgattaattc ttcatttaac gatgtagatt
      601 gggataaaaa agaatagatt tggttgtata ctttgaagtt cctgaaggta ataagagcgg
      661 ggaagaagtt aaacagagat tcaataaatt ttttttagtt attgttaatc tatattctat
      721 ctcttgttaa taaaacaatc aattaaaata tgagggatag ttataactga atcatcgtgg
      781 aagaaaaagt tatctgtcct acttgtaaac aacttggtta taaaagtcat gtatatgcta
      841 ttgattggaa aagttcttta gaacaaatag gtggatatta tgatgaaaag ggggattatg
      901 ttaaatctaa tgtggttccg acaacagcat taagtaaaac tttttggtgt acttatggtc
      961 atttttggat gcaaacgaaa taatattaat gtaaaataat aactaaaata ttcctaacaa
     1021 atttttatta taaattatga tattaaaata aaaggaagtt tgagaacttt actagaagtc
     1081 atatagttct acaaaaatat taattaatca ttttatatta aaaaagaaaa ataaatatat
     1141 catcatatca tcatcagcaa ctttcttcta attcatcata atacatcatg tcgctgacat
     1201 tattattgct gttgctgcta attgctgatg atgatcttct tgttgcctct ttttctgcta
     1261 ttagagcatc tttaaccgct ttgatacctt cgctttccat cttcaaaaca tctatagcaa
     1321 tgttggctgc tacttcacag cacttagcac attcattacc atttacttta ggatcttccg
     1381 cttttttctc taatatttta tagagatgga acattctatt tttaaacaac tgacattcta
     1441 aaaagagtgt attatctgtc ttttgcctct gtatttcccc gtacctttgc tcgatacgtt
     1501 gataatatct tgcaaccgtc cttgtagaaa tatgaagttc tcttgctatt tcttcttgac
     1561 ttttattttc gagtactagt ctaaatacgt gttgcaattg tgcctcatac tgttgtttgc
     1621 tgatcaattt tattttatca ctcactgaaa cctgacatat tatgacacat tcacataaat
     1681 aaataagagg tctaataata ataaatttag cattttgatt tattatcatt attattattt
     1741 gtcctttatt tatttttgtt gctatccttc tcacgattat ggagataata atggtaatat
     1801 tttttattat caatatttga attataatga attataataa ctactcaaat atttgttaat
     1861 acaatcaaga aataagaaaa aaaattttta gaatagtgtt attggacaaa tcatatcttt
     1921 ttgatatatt ataatatttg catatcattt attataatat aaaatataca ttattaatac
     1981 tgatataaga tatttccatt ttcttttcct taatatttgc tgttaatatt aaaagagatt
     2041 gtttctactt tactgataaa tatataatat ttatattttt attattatgt tagataaaaa
     2101 agtaggaatt ttcaacgctt ttattttctt tggaatagca gcactatttt ttccagcaac
     2161 cgcattagaa aattctattg catatgcaca aggtgaagaa atgtatcctc taccttatga
     2221 aaaagaagaa cgtagtagta atggatacta ctataacaat gataattatt atgaagagga
     2281 agaaaacaac aactattata catacaacaa agacaaaatt aagaatgatc ctattgtaaa
     2341 aataaagaaa aagttgtttg tatgtgaaaa tatacaagat gcgactgatt ctttccaatg
     2401 tgttgaaaca ataatatttc catttccagc aaggcctaat agtggtcaat atatagaatg
     2461 taccgaagaa ttatgtccac ttatagatga atcagatttt ggcgctcaaa tttttaagga
     2521 tgttgcaact gtacgtgctc taacacctga aggtactcca gtaaatcttg acaagttaca
     2581 ctattcaata acagaaggtg ctttaagcga gattagcaat ggaattggac ttgatatctg
     2641 tgagcctagt ggttttagtc atagtatata tcgtcaagca ttttcacaag atactgcttt
     2701 tttatatagc atttgtgtaa attatgtagg ggattgtaat gggactatat atcccggtga
     2761 agtaaagacc tgtacggtag agaattacat ttggtcggga gccttttcac aacctggtaa
     2821 tgctattgat gatacaacca caggaactac aactccaaat actaataccc aatcaagtaa
     2881 tacagaagga gaaataccta atacagccct ctctgtccct ctcgattcta tttcctagat
     2941 ggttggtata ttagtccttc tactagtcta ctgatgacaa acaaaccaaa caataaaaaa
     3001 ttttatcttc ttttctttat ttttttagtt cttctattta ttcaatcaaa taaaatatat
     3061 taaaataaaa tattttgttg ttattgttat tgttgcatta ttagtttagt agtttcgtag
     3121 tatgcatttg taagataaaa tacccgtcaa tttcttctgg aacattattc agaaaaatac
     3181 tctgaaaaaa gtaaccatta ctattttttc taaaatctag ttttcgatat ccatgaatac
     3241 catcaaaata tattctttta ttctttttga ctaaatagaa taatttttta cactatcttt
     3301 agaatttctt gtaaatttta tatttagtct attcgtggtt tttatttttg ttgtaatttc
     3361 tctaatatta gaccatgtaa aaaatattat tctacgaccc ccctttttaa aaaaatatat
     3421 attttcattt tgtctttgta ttttttttct attcaagacc gtcaccccat tttttctgtt
     3481 cgtcttgttc tctgttgtat ttttcttcag gtgtttcatt ctctggttct atctcttgct
     3541 gttctgttga ttgttcagat tcttctttct gctgttgtgg ttgttcctgt tgctctcctt
     3601 gaacagattc tatgttttct atattcttta attcaaaata atcttcaggg ttactaaagt
     3661 attgatctac aagtccttct aaggttattt cttcaccttt agaacctttt atttttgtaa
     3721 tatacccttc cgtagaataa tattttaaaa ttggttctaa aacagaaagt atatatattt
     3781 gatcgggaaa tcttgtagaa tttacaacaa ttttctttat ttcttgtgaa gaattattct
     3841 tttcttgtga atagaataaa ttaatatatt ttttcgtttc tataagaggg taatatatct
     3901 ttgctctttt atcgataaca ctatcaatac tatctatgta accatggttc attaatggat
     3961 atagatatga
//
LOCUS       DATIAS010000175         2498 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1257042, whole genome shotgun sequence.
ACCESSION   DATIAS010000175 DATIAS010000000
VERSION     DATIAS010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257042"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..272)
                     /locus_tag="VLA74_03480"
     CDS             complement(120..272)
                     /locus_tag="VLA74_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49798.1"
                     /translation="MNVSPMQTWRIIQDLGIVYKQPKLELEKGNDYEEKKGKIDRYKK
                     IYPLHF"
     gene            complement(356..478)
                     /locus_tag="VLA74_03485"
     CDS             complement(356..478)
                     /locus_tag="VLA74_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49799.1"
                     /translation="MTIKKYRESGLDGIRNKRKNGGRKPVISTHKNKEMIKDID"
     gene            complement(512..661)
                     /locus_tag="VLA74_03490"
     CDS             complement(512..661)
                     /locus_tag="VLA74_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49800.1"
                     /translation="MPNTPVRLELSTVQKKELFSFMKSTRDKEEYRRASAIKQKMKKE
                     YLIEQ"
     gene            complement(1364..>2498)
                     /locus_tag="VLA74_03495"
     CDS             complement(1364..>2498)
                     /locus_tag="VLA74_03495"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HSF49801.1"
                     /translation="TTLMNAYSAIKKFSAINGIKLDWEQISNNCLGRKNGNSNGKIIE
                     DRVYTKEEIIQLLDHADLRMKVIILTMLSSGIRVGGLADLKIKDLQYIEKFQIYKINV
                     YSYDSKEKYVTYCTPECASIINKYLEYRKKIGDSIAPESPLIYLKTSKANGYKKERIE
                     DHYFDKHISSDSIQQSVSRLQRKSQLIPKQSGEKDPTKRAQIRKPMMRCHAFRKIFDT
                     ICIENNVNHYVKEKLLGHTAKLGLDVNYFRPTESQLLNEYLKVVDDLTINDENRLSKQ
                     IKELQEKNQNKDYIIKDKLQEKEQEINDLKRSMEFLTNRFNAFLISQSENKIIYDDNG
                     NGQSGIIKGIELKSEINNKAVAEIAIPSSNSSSANSRSNNKKK"
BASE COUNT          731 a          368 c          331 g         1068 t
ORIGIN      
        1 cattagatcc tttatgaagt atcttttgct gttcccctct tttcatgtat gtcctggttg
       61 tgtatggttg cagatgtaac catgtttcat tcatcttcaa atcctagtag aatctttttt
      121 taaaagtgca gaggatatat cttcttgtat ctgtctatct ttcctttctt ttcctcataa
      181 tcattacctt tttctagttc aagttttggc tgtttgtata caatacctaa atcctgaatt
      241 attctccacg tttgcattgg actgacattc atttccaata gcgaggaaag ataagtagct
      301 aaaagtctaa ttctccatgt atttttgaga tagccaaatg tcctgggtga ttcattcagt
      361 ctatatcttt tatcatctct ttgtttttgt gggtagatat tactggtttt ctacctccat
      421 tctttctctt atttcttatt ccatccagac cagattctct atatttttta atcgtcatac
      481 acattacggt aattgacacc aaggtttttg gctattgttc tataaggtac tccttcttca
      541 tcttttgttt tatggcagat gctcttctgt actcctcttt gtcgcgagta ctcttcatga
      601 atgaaaataa ttcctttttc tgtacagtag ataattcaag cctaacaggg gtatttggca
      661 catgttgata gattatatca caaagctaaa tccatttcta tatttatgct aaatggatag
      721 cacaatgttg ataaaagatt agagacttaa cttagaagag catcgagata aaaataagca
      781 gaatttgacc agtttttaga attatattgc ttgtacatat agaaataatg ggtagagggt
      841 gagtttatta cttttctgtt catggttaca aaaaaagact tattaattga tttaagataa
      901 aagaatcagt taataattta tacaagaaaa atttttttta aatgactgtt tattatcata
      961 caattagtat aaagaaatat tatctttatt atttttgttc atgtaattat cctatatcat
     1021 ctactaattc tccttttctt ctaacttgtt taacatatca tctaattctt ctagttgtgg
     1081 tttttgaata gcatcgattt cagacttggt taattatata gtgaagaatt tgttattatt
     1141 ttttttatca tcagacatta agatgaattg tcaaactatt gaaattgata aaattattca
     1201 aaaattaatt gaggacaaaa aatatgaatg ggttattgaa aaactccttg aaataataaa
     1261 cccaaaaatt tgagaagtct ttttcaagtg aattaagtta atatattaat tttagtatta
     1321 ttcaaaaaca catgttcctt tttatattag atctttagca aatttacttt ttcttattat
     1381 tgcttctact attagcagaa gaagaattag aagaaggaat tgctatttct gctactgctt
     1441 tattgtttat ttctgatttt aattcaattc ctttaattat tccactttgt ccattaccat
     1501 tatcatcata aatgatctta ttttctgact ggcttattaa aaatgcatta aacctatttg
     1561 ttaagaattc cattgatctt ttcaaatcat taatttcttg ctctttttct tgaagtttat
     1621 ctttaattat atagtctttg ttttgattct tttcttgaag ttccttgatt tgtttggaga
     1681 gtctattttc atcattgatt gttaaatcat ctacaacttt gagatattca tttaataatt
     1741 gagattcagt aggtctaaaa taattaacgt ctaaacctag ttttgcagta tgacctaata
     1801 atttttcttt tacataatgg ttaacgttat tttctataca aatggtatca aatatcttac
     1861 ggaatgcgtg gcatcgcatc ataggttttc ttatctgtgc tctttttgta ggatcttttt
     1921 cacctgattg tttaggtatt agttgtgact tacgctgtaa tctacttact gattgttgta
     1981 ttgaatcgga cgagatgtgt ttatcaaaat aatgatcttc tattctttct ttcttatatc
     2041 catttgcttt tgatgttttt agataaataa gaggtgattc aggtgctata ctatctccta
     2101 ttttttttct gtattcaaga tatttgttta ttattgaagc acattcagga gtgcaatagg
     2161 taacatattt ttcttttgaa tcatatgaat aaacattgat tttatatatt tgaaattttt
     2221 ctatatattg taaatctttg atttttaaat ctgctagtcc tcctactctt atgccacttg
     2281 atagcattgt taaaataata actttcattc ttagatcggc atgatccaat aactgaataa
     2341 tttcttcttt tgtgtaaact ctatcttcta taattttacc attgctattt ccatttttcc
     2401 ttcctaaaca attattagat atttgttccc aatctaattt tatgccattt attgcagaaa
     2461 atttttttat tgcactataa gcattcatta aggttgta
//
LOCUS       DATIAS010000176         3730 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1257066, whole genome shotgun sequence.
ACCESSION   DATIAS010000176 DATIAS010000000
VERSION     DATIAS010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257066"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1698)
                     /locus_tag="VLA74_03500"
     CDS             complement(<1..1698)
                     /locus_tag="VLA74_03500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49802.1"
                     /translation="MSVESFEAVVIGSGFGGTILTLSLANKFESDNAANNTDKKVCLL
                     ERGQWWLSHEINYTPPDKRKPSYHTNMREFLDDNKKPYHFWPYPDTVRGNIEIASAAR
                     AISKTGLYDYRVLGKVHAIASSGVGGGSLVYSNVTLEPDSGVFVNWPTQKILDDPLDK
                     KFSYKEVYGDAASQYANNTLDFDKIVDIDAKNIDYFDIARNFIGVNKITTNASLTKNK
                     LEKTKVFQEAGQALIDEGNTSIINVVDDAGKKTGDFDIDLSITDVSAGTFGFDKSNMK
                     NSRPWISEINKYSSITQTNECQRQGRCNLGCIPGARHTLNKRLFNAIHPQSGNPKPLE
                     IKELCDVYDIEFVNGEGYKISYFQYDKTTEHRVQKQIMAKILVISASSLGSTELLLKC
                     KERGHLQLSSILGKRFYTNGDLFAYMTLDKKKIDITRGPINTSHISFKNPGDNRFYTI
                     EDTTIPKIVAPLFAKILELNANLQSINFANIITILINNLSLLQGINISNLSGLFSLNP
                     LQSLTTLFTMIWNNNNIRNFLRQNLKNVSPSDNSTRKFLEGLLNLVTTDIKDQFAYPE
                     "
     gene            complement(2190..3149)
                     /locus_tag="VLA74_03505"
     CDS             complement(2190..3149)
                     /locus_tag="VLA74_03505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49803.1"
                     /translation="MAEESIFLTGYTKDNLQISKQQGILGWKQNSKRRELAKGDYVFV
                     YDIDDKKIDCLFQINSRIEANDLLWKDEIESNSIKYKNRWKANLIFDNLNIDKNEILS
                     ISPFNNNPNRFFLFIKNPFPNFLDENFHDFRSFLLSKNKAQNLIISSNEKSEIHINNN
                     QNNQIQYFLVQVNELGSKNILNNNFYEHHNWDQTPRDKDHGIVQSGDILLVYFASQSI
                     QFKKQLKKIYRVIEVKENHVSFQLSEEIELNGLSLDTIKQAITTGELSTVFNKISQQG
                     FNITKIDKSDYDSILFLDKISMEKASKDPSMWIVRAGDTGQGE"
     gene            complement(3336..3509)
                     /locus_tag="VLA74_03510"
     CDS             complement(3336..3509)
                     /locus_tag="VLA74_03510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49804.1"
                     /translation="MILLRLGKISEIDFKKFEVVSQFRNEIIHTEKIPETDDIIESLK
                     MIYKLTEVMNRLK"
BASE COUNT         1207 a          579 c          487 g         1457 t
ORIGIN      
        1 ctctggatat gcgaattgat ctttaatatc agtagtaact aggtttaata gtccttccaa
       61 aaattttcta gtagaattat cagaaggaga cacattcttt aaattttgac gaagaaagtt
      121 tctgatattg ttattgttcc aaatcatggt aaataatgtt gttaaggatt gcagtggatt
      181 taaagagaat aagccagaaa gattggatat gtttattcct tgtaacaaag ataagttatt
      241 gatcaaaata gtaattatat tggcaaaatt tattgattgt aaattagcat tcaattcaag
      301 aatttttgca aataatggtg ctactatttt tggaattgtt gtatcttcta tagtgtaaaa
      361 tctattatct ccaggatttt taaatgatat atgagaagta ttaattggac ctcttgtaat
      421 atcaattttt ttcttatcaa gagtcatata tgcaaacaga tctccattgg tatagaatct
      481 ctttccaagt atactactga gttgtagatg accgcgttcc ttacatttca aaagcaattc
      541 tgtagaacct aatgaacttg cagaaattac caagatcttt gccattattt gtttttggac
      601 tctatgctca gtagttttat catattgaaa ataacttatc ttatatcctt cgccattaac
      661 aaattcgata tcataaacat cacacaattc ctttatctca agtggttttg gattgccact
      721 ttgaggatgt attgcattaa ataatctttt atttaatgta tgtctagctc ctggaataca
      781 tcctaaatta catcttccct gtcgttgaca ttcatttgtc tgtgttattg aagaatattt
      841 attaatttca gatatccatg gacgagaatt tttcatattg cttttatcaa agccaaatgt
      901 accagcagag acatcggtta ttgagagatc aatatcaaaa tcaccagttt ttttacctgc
      961 atcatctact acattgataa tacttgtatt accttcatcg ataagagctt gaccagcttc
     1021 ttgaaaaact ttggtctttt caagtttatt ctttgtcaaa cttgcattgg tagtaatttt
     1081 attaacacca ataaaatttc ttgcaatatc aaaataatcg atattctttg catctatatc
     1141 tacaattttg tcaaagtcca gagtattatt tgcgtattgc gatgcggcat caccatatac
     1201 ttctttataa gaaaatttct tatctagagg atcatcaagt atcttttgtg taggccaatt
     1261 tacaaaaaca cctgaatctg gttcaagagt aacattagaa tataccaagg aaccaccgcc
     1321 tacaccacta gatgctattg catgaacctt accaagaact ctataatcat ataaacctgt
     1381 tttactgatt gctcgtgcag ctgacgcaat ttcaatattt cctcttacag tatcaggata
     1441 gggccaaaaa tgatatggtt ttttattatc atcaaggaat tccctcatat ttgtatggta
     1501 tgacggtttt cttttgtcag gaggtgtata attaatttca tgtgacaacc accattgtcc
     1561 tcgctctaaa agacagacct ttttatcggt attatttgca gcgttgtcag attcaaattt
     1621 attggctaaa gaaagagtaa gtattgttcc tccaaatcca gaacctatta caactgcttc
     1681 aaaactttct acagacaata acgaatcaaa cctattgtac tatttcaaat tttttatctg
     1741 aatatcctat acatagatgt cattagctta ttaatagatg aggaaatcaa tattttctat
     1801 tataaatttg attgccataa tattatattt ggtatataaa aaatctacaa catgattaat
     1861 agtttcaatt ttatatttct ttcattccta cctactggtc taaattgttg aattcctgaa
     1921 ttcaaatttt catattggta ttctcctaaa attttgccta cagctattaa tctcgcttta
     1981 tgtgttttaa gtggtaatac tataaaatca cctattttaa tttcaaaaat aaaattccat
     2041 atttgaggaa caacttttcc tactctccca atgctttcat ttggatgtgt ttttctataa
     2101 tgttctttga acttttcgaa atctttgata tgatgtagtc ctggaagacc atcataacct
     2161 atacttatac aattattttc taaagcagac tattctcctt gtccagtatc tcctgctctt
     2221 acaatccaca tgcttggatc tttactagct ttttccattg agatcttatc tagaaaaaga
     2281 atagaatcat aatccgattt gtcaatcttt gtaatattaa atccttgttg agatatttta
     2341 ttaaaaacag tcgataactc ccctgttgtg attgcttgtt taattgtgtc aagtgaaagt
     2401 ccatttaatt caatttcttc tgatagttga aaactgacat gattttcttt gacctctata
     2461 actctataaa ttttttttag ttgtttctta aactgaattg attgactagc aaaatacact
     2521 aataatatat ctccagattg aactattcca tggtctttat cacgaggtgt ttgatcccaa
     2581 ttatgatgtt cataaaagtt attattaaga atatttttac ttcctaattc atttacctga
     2641 actaaaaaat attgtatttg gttattttgg ttattgttga tatgaatttc agatttttca
     2701 tttgatgata taattaagtt ttgagcttta tttttagata aaaggaacga tctaaaatca
     2761 tgaaaatttt catctaagaa atttggaaag ggatttttta taaataaaaa aaatctattt
     2821 ggattattat tgaaaggaga tatagataat atttcatttt tatctatgtt taaattatcg
     2881 aaaattaaat ttgccttcca acgattttta tatttgatac tattagactc tatttcatct
     2941 ttccataata aatcattggc ttctattcgt gaattaattt gaaaaagaca atctatcttt
     3001 ttatcatcga tatcataaac aaacacataa tctccttttg ccaattccct tcttttagaa
     3061 ttttgcttcc accctaggat cccttgttgt ttagaaattt gtagattgtc tttggtataa
     3121 cccgtgagaa aaatagattc ttctgccaat aattctttaa ataagtagtt aaatattaga
     3181 tttttccaaa ttttatttac tataaattag atgttttcta atataacctt gatattgcag
     3241 gattaaaagt tctcaaataa gttaattaag aagccaaaat cttcagagta ttgaaatctc
     3301 atttcatatt cttcttaatt tgctaaaggt ttgagtcatt ttaatctatt cattacttca
     3361 gttaatttat aaatcatttt cagtgattca ataatatcat ctgtttcagg aattttttca
     3421 gtatgaataa tttcatttcg aaattgtgaa actacttcaa actttttaaa atctatttct
     3481 gaaatttttc ctaaccgtaa tagtatcata ctgacagata aagtatatca aacatgacac
     3541 agcagtgata tttggataaa ggaatacgtt cagtagagac ttttacatag atgcataact
     3601 cgtttaaaca atctatcttt attctctttt acttatctga tagttatgct ttgaaacaag
     3661 ttgtacaaag atgcttttag cattatttct tttatcatat tcttgaattt aatagcagta
     3721 acatattctc
//
LOCUS       DATIAS010000177         4831 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_849464, whole genome shotgun sequence.
ACCESSION   DATIAS010000177 DATIAS010000000
VERSION     DATIAS010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4831
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849464"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1464)
                     /locus_tag="VLA74_03515"
     CDS             complement(<1..1464)
                     /locus_tag="VLA74_03515"
                     /inference="COORDINATES: protein motif:HMM:NF024677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAFs-binding domain-containing protein"
                     /protein_id="HSF49805.1"
                     /translation="MHVFVAMPFGTKEEIDFNRIYLDLIKPALEEEGFEVFRADEEQK
                     AGEIRTDMFQELLLADLVVADLSIDNPNVWYEMGVRHALRARGIVQIKSKREYMPFDV
                     YTDRTFSYHVKEGVPDPDFLSKDKTALRIMCRETISSWHDRKISPVYHLLPSLQEPNW
                     KDLRVGGIKEFWEKQETWESKINVARKKQRSGDILILADEAPIQALRLEAYRTAGKAL
                     MDSGQFSLSLEQIEKALLIDPNDLKSRQYKGILLGRLEKYEEAKEWMRSIVKANPTDS
                     ETLALLGRIEKDGWIQTWRGPKKTIKQMAKDAEYEKSLLKEAIDPYYKGFMLNPNHYY
                     SGINAITLLYLLMYLTGDNTQDKRLKALEGGIRWAIESAISKETPSFKDYWARVTLGD
                     VDILVSDIPTIEESYKHAIAVAENNWFYIDSSRQQLLLLRDLDFRPKEVEAAIKIFDR
                     ALEKIDKPEKRIQPNSIFLFSGHMIDSPERTEKRFPND"
     gene            2187..>4831
                     /locus_tag="VLA74_03520"
     CDS             2187..>4831
                     /locus_tag="VLA74_03520"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49806.1"
                     /translation="MKLFISYSRDDAGDFAKHVHRYFISRKYHVFIDINSIRAGDPWA
                     DSIEKNISDCDIFIVILTPDSLLSSHVEKEVLQAQRNNKIIIPCVNEDVEYNEIKWTL
                     NDIQGVEFSDRYELVRKLYSKIKNYDTSANTKINDSNSLLNPLYGNEYLAKADSPAIT
                     SAAHSSQKYLDKAKEWENVDENEKALKQYENAIKEEPENFLVRCELSFFLERIGKTNE
                     ALEAIEQAIDLKPTNSEVWYHKARILEKLEKYEEAIVALTKDLKLDSKDIKSWTSKAK
                     LLVKMEKYEEALDAIYEITNIDSANIDAFEKKGKILEQLKQYKEAINCYDKILEIQPD
                     NHAILISKGHVLQKLDKYQEAIECYDKVLNSKPENLEVRIERCITIAKSSRYQEAVEC
                     YDEIIQLNPDNKLLWINKGDILYKNLKQYNEAIECYDKVLQLDPDDPDSKKNRESALY
                     ELEKEKFAHLINEANSYYENKNYTKVIELCDKAIDIDKENHKPYLYKAKSLQHLSRYE
                     EAVACYYKVLAIDKNNEEAIKNKKITIEILNKERFTSLINEIKKCYENKDYSTVIRLS
                     DDASVIYPNDPLSYLYKGHALQELTRYEEAIQAYDDVLRIDPKNADALNKRKIIQEQL
                     DKRSDKQKETIQETKISDNVYTVNDKRHHEDVKYMNTNVGQLPNDDHSIKVASETDGK
                     IIRLWDQKPFSITLEGHTDKVTSVAISPDNTKVVSGSDDKTIKIWDLKSGELLNTLVG
                     HKSYICSIAISSDNTKVVSGGGWWDKKIKIWDLDSGELLNTLVGHINKISSVAISPDS
                     SKIVSGGIEGKIKIWDLDSGELLNTLDLGSLEMVLSIAITPDSSKIVSGLHYHQIYIW
                     DLDSGELLNSFFGHAEEINSVAITP"
BASE COUNT         1748 a          747 c          785 g         1551 t
ORIGIN      
        1 atcatttgga aatcttttct ctgttctttc aggtgaatct atcatgtgac cactaaagag
       61 aaagattgaa tttggttgta ttcttttctc gggtttatct attttttcta aagctcggtc
      121 aaaaatttta attgctgcct ctacctcttt aggacggaaa tctaaatccc taagaagtaa
      181 aagctgttgt cgtgaagaat caatataaaa ccagttgttt tcagctactg ctattgcgtg
      241 tttgtaagat tcttctatag taggaatatc actaactaaa atatctacat caccaagagt
      301 aactcttgcc caatagtctt tgaaacttgg tgtctcttta gaaatggcac tttcaatagc
      361 ccaacgaatt ccaccttcca acgctttgag ccttttatct tgcgtattat ctccagttaa
      421 atacataagg agatacaaaa gagtaatggc attaattcct gaataataat gatttggatt
      481 aagcataaat cctttataat aaggatctat tgcttcttta agaagacttt tttcatattc
      541 agcatccttt gccatctgtt ttatagtctt tttaggtccc cgccaagttt ggatccatcc
      601 atctttttct atacgtccca acagagccaa tgtttctgag tcagttgggt tcgccttgac
      661 tatggatcgc atccattctt ttgcctcttc atacttttcg agccttccta aaagaattcc
      721 tttgtactga cggctcttta gatcattggg atcgattaat aaagccttct cgatttgttc
      781 taaactcaag gagaattgac ccgagtccat aagagcttta cctgcagtcc tataagcctc
      841 taaacgtaat gcttgtattg gagcttcgtc tgctaaaatt aggatatctc cagacctttg
      901 ttttttacgt gctacattaa tcttgctctc ccacgtctct tgtttttccc aaaattcttt
      961 tattccacca actcgaagat ctttccagtt aggttcttga agagatggta gaagatgata
     1021 tactgggcta attttgcgat catgccatga tgaaattgtt tctctacaca taattctcaa
     1081 ggctgtctta tctttagaaa gaaaatctgg gtcaggcact ccctctttca catgatagga
     1141 aaatgttcta tctgtataaa cgtcaaaggg catatattct cgttttgact ttatctgaac
     1201 aataccacga gcacgtaatg catgcctgac tcccatctca taccatacat taggattgtc
     1261 aatagataga tctgctacaa caagatcagc taaaagaagt tcttggaaca tatcggtacg
     1321 tatttcccct gccttttgtt cttcatctgc tctaaaaact tcaaatccct cttcctcaag
     1381 tgcaggtttg atgagatcta agtaaattct attgaaatca atttcctctt tggtaccaaa
     1441 aggcatagct acaaaaacat gcatatttac gttgttagaa tatttactta ttcatatcct
     1501 ttttgaatat ataatttaga tttagaatgc aaagctaaag tgtatgaaaa gatattaaac
     1561 tcaataaccg tggcggggga tgacaaaatc tttatagata tcttatcctc ctcttttaga
     1621 ctccttagga aatgttaata gaattagtgt tatctgtatt aaaaaattag cattagaaca
     1681 cttatccaaa taaactccaa aaggggattt ttcggattcc gtaaatgata atatattttg
     1741 tgtctcagtt aaatctaata ataacaattt gattttaatg atctaatttc acttttacta
     1801 gcttatataa tttcagtatg atattattct tagacgtcac acactcaaag caaattcatc
     1861 catgatagac atagaaaata caatataact aacaattaag agtttacaca ataatactaa
     1921 aaataatgtc tctctgggtc taaaatattt tcatcgtgtg acactttttg tatctgtcac
     1981 atgatattat ttccatgcat aaaataagta gtctttctta tctaattgta gatatctttt
     2041 caataaatat agtctcaggc ataacagata tatgctattt ttaaaacttt ttaggcgtcg
     2101 caaattttac tatagtatac ttatttttaa ttcggactat ttgttaaata aactttaata
     2161 cattatctca gatttagatc ttcaaagtga agctattcat atcatattcc agagacgatg
     2221 ctggtgattt tgcaaagcat gttcataggt attttattag tcgtaagtat catgtcttta
     2281 ttgatataaa tagtataaga gcgggtgatc cttgggctga ctcaattgaa aaaaatattt
     2341 ctgattgcga tatttttatt gttattttaa cacctgactc tcttttaagc agtcatgtag
     2401 aaaaagaggt tttgcaggca caaagaaata ataaaataat tataccttgc gtaaatgagg
     2461 atgtagaata caacgaaatt aaatggactt taaatgatat tcaaggagtt gaattttcag
     2521 atagatatga attagttaga aaactttact ccaagattaa gaattatgat accagtgcca
     2581 atactaaaat taatgattct aatagtctcc taaatccatt gtatggaaat gaatatcttg
     2641 ctaaggcaga ttcccccgct attacctctg ctgcccattc atctcaaaaa tatttagaca
     2701 aagccaaaga atgggaaaac gttgatgaaa atgaaaaagc tttaaaacaa tatgaaaacg
     2761 ctataaaaga agaaccagaa aattttttgg taaggtgtga attatccttc tttttagaga
     2821 gaattgggaa aactaatgag gctttggaag caatagaaca agctatagat ttgaagccta
     2881 caaattctga ggtatggtat cacaaagcac gcattttaga aaagctagaa aaatatgagg
     2941 aagcaatagt agcattaact aaagatttaa agttagattc aaaagatatc aaatcatgga
     3001 caagtaaagc taagctatta gtaaaaatgg aaaaatatga agaagcatta gatgcaatat
     3061 atgagataac taatattgat tctgctaata ttgatgcatt tgaaaagaaa ggaaaaatac
     3121 ttgaacaatt aaaacaatat aaagaggcaa taaattgtta tgataagatt ttggagatac
     3181 agccagacaa tcatgccatt ttgattagta aaggacatgt attacaaaaa ttagacaaat
     3241 atcaagaagc aatagaatgt tatgataaag ttttaaactc aaaaccagaa aatttagagg
     3301 ttcgaattga aagatgtata acaatagcaa aatctagtag atatcaagag gctgtagagt
     3361 gttatgatga aattatacaa ttaaatcctg ataataaatt attgtggata aataaaggag
     3421 acattttata caaaaatcta aaacagtata atgaagctat agaatgttat gataaagtat
     3481 tgcagttaga tccagatgat ccagattcaa agaaaaatag agagagtgca ttatatgaac
     3541 tggaaaaaga aaaatttgca catctgataa atgaagctaa ttcatactat gaaaataaaa
     3601 attataccaa ggtaatagaa ttatgtgata aagcaataga tattgataaa gagaatcata
     3661 agccatattt atacaaggct aagtctttac aacacctatc aagatatgag gaagcagtag
     3721 cctgctatta taaagtttta gctatcgata aaaacaatga agaagcaata aaaaataaaa
     3781 agataacaat agaaatcctt aacaaggaaa gatttacatc tttaataaat gagataaaaa
     3841 agtgttatga aaacaaagac tattccacag taattaggtt atctgatgat gcttctgtaa
     3901 tatatcccaa tgatcctctt tcatatttat acaaaggaca tgctcttcaa gaattaacaa
     3961 gatatgaaga ggctatacaa gcttatgatg atgttttgag aatagatcct aaaaatgctg
     4021 atgctttgaa taaaagaaag ataattcaag aacaattaga taaaagatca gataaacaaa
     4081 aagaaacaat tcaagaaaca aagatatcag ataatgttta taccgttaat gacaaaaggc
     4141 atcatgaaga tgtaaagtat atgaatacta atgtaggaca actacctaat gacgatcata
     4201 gtatcaaagt tgcttctgaa acagatggta aaataatccg gctttgggat caaaagcctt
     4261 tttctataac attagaaggt catacagata aggttacttc agtagcaata tcaccagata
     4321 atacaaaagt tgtttctgga tcagatgaca aaacaatcaa gatctgggat ctaaagtcag
     4381 gtgaattact taatacattg gtaggtcata aaagttatat ctgttctata gcaatatcat
     4441 cagataatac aaaagtcgtt tctggaggtg gatggtggga caaaaaaatc aagatctggg
     4501 atctcgattc aggtgaatta cttaatacat tagtgggtca tataaataaa atatcctcag
     4561 tagcaatatc gcctgacagt tcaaaaattg tttctggcgg aattgagggc aaaatcaaga
     4621 tctgggatct cgattcaggt gaattactta atacattaga cttgggttct cttgaaatgg
     4681 tattgtcaat agcaataaca cctgacagtt caaaaattgt ttctggacta cactatcatc
     4741 aaatctatat ctgggatctg gattcaggtg aattacttaa ttcattcttc ggtcatgcag
     4801 aggagattaa ttcagtggca ataacacctg a
//
LOCUS       DATIAS010000178         2357 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_849647, whole genome shotgun sequence.
ACCESSION   DATIAS010000178 DATIAS010000000
VERSION     DATIAS010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849647"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..368)
                     /locus_tag="VLA74_03525"
     CDS             complement(198..368)
                     /locus_tag="VLA74_03525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49807.1"
                     /translation="MESSLVRKSNNNNRNIDIKLSSLVPSREDLKNLELSDLIIMASI
                     SYDFDYRLKYFF"
     gene            646..1149
                     /locus_tag="VLA74_03530"
     CDS             646..1149
                     /locus_tag="VLA74_03530"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF49808.1"
                     /translation="MTAYNKILVPYDSSKPSETALEHAIQIAKMSSISSAADTTINII
                     LLHVVQDIPVPATFGAGLFKSNKTGDMITLEQYLKDITLEIKTDVKKMLEENISKYRN
                     IENVSLQSQVLIGDPSNEIIKFANDEKVDLIIMGTTGLGGFKKFVFGSVARNVSEKAN
                     CPVMLVR"
     gene            complement(1192..>2357)
                     /locus_tag="VLA74_03535"
     CDS             complement(1192..>2357)
                     /locus_tag="VLA74_03535"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSF49809.1"
                     /translation="AWMSNTATTILMLPIALSVISLLGNIDKKDRFVRCLLLSVAYAA
                     SISGVTTLISTPANAIFASLAKDVTGTEVTFAQWILIGFPIGGISLIVAWLYMIRFGS
                     KITDIKSDIIGEKDVITKKLNELGNLSRDEKIVAIIFIITVIAWITRGLLWKDLLPAV
                     GDSTIAIASAISLFLIPSTYSKYANSKRFNKNDDDIRNLIKYNNNNNDIKNYDDITET
                     SKSSSSSTSKLLDWNTATKIPWGVLILMGGGLALAHAFTSTGLDDWIASNLSVVSGMP
                     FIVIILILVTMAIVPSEMISNTATAAILIPIAASLATSVGLNPLLLMAPISIAASYGF
                     IMPVGTPPNAIVYSSGYITSREMARAGLPLDLISIIMVTILTSIFVPLIFGIV"
BASE COUNT          859 a          355 c          334 g          809 t
ORIGIN      
        1 gtcatttgcc tgttcaggtt tgatctctaa catcactata tcatggcctc tgattttatc
       61 ccaagtacct ttttctatat tgatattatt tcattacaac cagtgatata acattgctac
      121 gattgtctat cagcaaataa atagtataaa cgattttcag gatttttaaa agggtcagat
      181 aaggtaaaag catctcttta aaaaaaatat ttcaatctat aatcaaaatc ataagaaatg
      241 gaagccataa taatcaaatc agagagctca agatttttta agtcttctcg tgaaggaaca
      301 agagatgaaa gttttatatc gatatttcta ttattattat tactttttct tactaatgag
      361 gattccattt ttattcctat tcataagtgg gtctttataa aatataaata tatcatataa
      421 aatataatat accatataaa agatatatta aacatcttta acaataatag tttttcttaa
      481 taaattatca aaatataatt tttttgtata tatattttta gaactagaat atattacaaa
      541 aaaatgataa tcatgattaa aactttcaag aatttaaaaa atatttattt tttgtaataa
      601 caaaatctaa attgtacaag gtactttatt agttgaaaat aaagaatgac agcatataat
      661 aaaatattag ttccatatga tagttcaaaa ccatctgaaa ctgctttaga acatgctata
      721 caaattgcaa aaatgtctag tatttcttct gctgctgata ctactatcaa tattatactt
      781 ttacacgtcg ttcaagatat acctgtacca gctacttttg gagctggctt atttaaatca
      841 aataaaacag gagatatgat tacattggaa caatatctaa aagatatcac actggaaatt
      901 aaaacagatg ttaaaaagat gctagaagag aatatctcta aatatagaaa tattgaaaat
      961 gtttctttac aatcacaagt gttaattggt gatccatcta acgaaataat aaaattcgct
     1021 aatgatgaaa aagtagacct aataataatg ggcactacgg gattaggtgg atttaaaaag
     1081 tttgtatttg gaagtgttgc tagaaatgtg tctgaaaaag ctaattgtcc agttatgtta
     1141 gttcgctaat aaatataaaa aataactttt aatatctaca ttattattat tttatacaat
     1201 tccaaaaatc agaggaacaa aaatgcttgt taatattgtt accataatta tggaaatcaa
     1261 atctaatgga agtcctgctc ttgccatttc tctggaagtt atataaccac ttgagtaaac
     1321 aattgcatta ggaggtgttc ctactggcat gatgaatcca taacttgctg ctattgatat
     1381 tggagccata agtaataaag gatttaatcc tacagatgtt gcaagtgaag ctgctatcgg
     1441 aattaatatt gcagccgtag cagtattact tatcatttct gaaggtacta ttgccattgt
     1501 tactaatata agaataatta ctatgaacgg catgccagag acaacactaa ggtttgatgc
     1561 aatccaatca tctaaacctg tagaggtaaa tgcatgagca agagcgagtc cgcctcccat
     1621 tagaataagg acaccccatg gaattttagt tgcagtattc caatctagta acttgctggt
     1681 actgctgcta ctgcttttac tagtttctgt aatatcatca taattcttaa tatcattatt
     1741 gttgttgtta tatttaatga gatttctaat atcatcatca tttttattga aacgtttact
     1801 atttgcatat tttgaataag tagaaggtat taaaaataat gaaatagctg atgcaatggc
     1861 tattgtagaa tcacccacag ctggtaataa atccttccac aataaacctc tggtaatcca
     1921 tgctataaca gtgatgataa aaattatagc aactatcttt tcatctctac taagatttcc
     1981 tagttcattt agcttctttg taattacatc tttttctcca ataatatctg atttaatatc
     2041 tgtaatttta gatccaaacc taatcatgta taaccatgca actatgagag aaattccacc
     2101 gatagggaat ccgattaata tccattgagc aaaagtaact tcagttccag ttacatcctt
     2161 agctaaggat gcaaatattg cattagctgg agtacttatc aatgttgtga caccactaat
     2221 actcgcggcg tatgctacag aaagtaatag acatctcaca aatctgtctt ttttatctat
     2281 gttacctaat aaagaaataa cagataaagc aataggaagc ataagtatgg tagttgcagt
     2341 attactcatc catgctc
//
LOCUS       DATIAS010000179         2083 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1939498, whole genome shotgun sequence.
ACCESSION   DATIAS010000179 DATIAS010000000
VERSION     DATIAS010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1939498"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            254..904
                     /locus_tag="VLA74_03540"
     CDS             254..904
                     /locus_tag="VLA74_03540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49810.1"
                     /translation="MKIIEQTHEESNAYSLFVYAIRSQVTRDYYLRRLRIFFNYINFE
                     LDKTMEQRCKWFVDKGSNDPTWAFNSILRFLQFQKERVENKEITSGTLKNFVKSLKIF
                     CEMADITIQWKKITRGLPNARQSANDRAPTIDEIRKLLEYPDRRIKPIVYTMISSGIR
                     LGAWDYLKWKHIVPIMDDKGEVLAAKIIVYAGEHDEYYSFITLEAYISLLDWFNFR"
     gene            complement(881..1660)
                     /locus_tag="VLA74_03545"
     CDS             complement(881..1660)
                     /locus_tag="VLA74_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49811.1"
                     /translation="MNLGKTIKKLSNRLDVVVYPYSSSPINELRHDGINFWKGKKIIP
                     AKKWNEIYEKNSIYTDNYRITLVSRKPLQYFPDDYNGYISSFNEELKEETQKWNKEYY
                     ELLEFRKNPTLGRNKCSRCIFSTHLDDPLFVGIEKVVARIVSNHCNNNNNSTISNVNN
                     DFLISYPYKVMNFFHCPFEHNNNQYSYTKEKLFFLPGVTFAIEQAISIFHETTKNNEI
                     IYEVDVDNDRVQEIHTNYNGELFSWGWKDSIKEQLSKVKPI"
     gene            complement(1657..>2083)
                     /locus_tag="VLA74_03550"
     CDS             complement(1657..>2083)
                     /locus_tag="VLA74_03550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49812.1"
                     /translation="DSSNSSKSKFIIEERRRLVVKLWAQSKTETEIARELHCNVSTIC
                     RDIKFLKKLSQQFVFDLAKDLGFYYKGCIDTMDQIQQKCWAIFNNDNVSQKHKLLALK
                     KIKETCESKFSLIEKGPSVMALNSLQERVEKIESSSNSK"
BASE COUNT          731 a          310 c          288 g          754 t
ORIGIN      
        1 aatccatata tagtatttaa aaaggtaaaa cacactataa aagaaagaaa aaaatagcaa
       61 cacttgcaat tttcaataat gaactttcaa atatcttcca taaaaatttt ttatgataac
      121 tggttccacg ttatagaatg ggaccgaaat ttaagtcaaa ttagtttctc acatcccact
      181 ggccccattg tgatattagt tctcaaattg aattcactct taaaaataaa aaataaggtg
      241 aatcaaaaaa taattgaaaa taatagaaca aactcatgag gaatctaatg catattcttt
      301 atttgtatat gctattagat cacaagttac aagagattac tatttgagaa gattgagaat
      361 tttctttaat tatattaatt ttgaacttga taaaacaatg gaacaaagat gtaaatggtt
      421 tgtagataag ggaagcaatg atcctacttg ggcatttaat tccattttaa gatttttaca
      481 atttcaaaaa gagagagttg aaaataaaga aattacatct ggaacactaa agaattttgt
      541 aaagtcatta aaaatctttt gtgaaatggc tgatattacg atccaatgga agaagattac
      601 aagaggatta ccaaatgcaa gacaatcagc aaacgataga gctcctacta tagatgaaat
      661 acgcaaattg ttagaatatc ctgatagaag aataaaacca attgtttata caatgatatc
      721 atcaggaata aggttaggtg catgggatta tctaaagtgg aaacatatag tacctattat
      781 ggacgataaa ggagaagtat tagcagcaaa gataatcgtg tatgctggcg aacatgatga
      841 atattattca ttcataactc tagaggcata tatctcatta ttagattggt ttaactttag
      901 ataattgctc ctttatactg tccttccatc cccaactaaa tagttctcca ttgtaattgg
      961 tatggatctc ctgaactcta tcattgtcaa catctacttc atatattatt tcattatttt
     1021 ttgtcgtttc atgaaatata gatatagctt gttcaattgc aaatgtcact cctggtaaaa
     1081 aaaataattt ttcttttgta taagaatatt gattattatt atgctcgaat ggacaatgaa
     1141 agaagttcat gactttgtat ggatatgaaa tcaaaaaatc attattgaca ttgctaatag
     1201 tagaattatt attattattg caatgattgc ttacaattct agctactact ttttctattc
     1261 caacaaaaag tggatcatct aaatgagttg aaaatataca cctactacat ttatttcttc
     1321 ccaaagtagg attttttcta aactctaaca attcataata ttctttattc cacttttgag
     1381 tctcttcttt tagttcctca ttaaatgaag atatatagcc attgtaatca tctggaaagt
     1441 attgtaatgg ttttcttgat actagagtaa ttctgtagtt atctgtatag attgagtttt
     1501 tttcataaat ttcattccat ttttttgctg gtattatctt tttacctttc caaaaattaa
     1561 ttccatcatg tctcagttca ttaataggag aagatgaata tggataaaca acaacatcta
     1621 gtctatttga taatttctta atcgttttac ctagattcat ttactatttg acgatgattc
     1681 aattttttca actctttcct gcaaggagtt taaagccatt actgaaggac ccttctctat
     1741 caaagagaat ttagattcac aagtttcttt aatctttttt aatgctagta gtttgtgctt
     1801 ttgcgagaca ttgtcattgt taaaaatagc ccaacatttc tgttgaatct gatccatagt
     1861 atcaatacat cctttataat aaaatcctaa atctttggct aaatcaaata caaactgttg
     1921 tgatagcttt tttagaaatt ttatatctct acaaatagta gaaacattac aatgaagttc
     1981 tcttgctatc tcagtttctg tctttgactg agcccataac ttaactacaa gtcgccttct
     2041 ctcttcaatt atgaattttg atttgctgct attgctactg tca
//
LOCUS       DATIAS010000180         4123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1803273, whole genome shotgun sequence.
ACCESSION   DATIAS010000180 DATIAS010000000
VERSION     DATIAS010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4123
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803273"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VLA74_03555"
     CDS             complement(<1..423)
                     /locus_tag="VLA74_03555"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSF49813.1"
                     /translation="MLNFVGEITDPIHRYIRFTELEREIIDTPVFQRLRKIRQLAGAH
                     LVYPSAQHTRFEHSLGTMHLAGLAGLTLLDKGYIEKKDQLEGLRLAALLHDIGHGPFS
                     HLFEEVLIGSGISASSHENMGKKIIRETIIKDKLEKYGY"
     gene            complement(551..979)
                     /locus_tag="VLA74_03560"
     CDS             complement(551..979)
                     /locus_tag="VLA74_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease domain-containing protein"
                     /protein_id="HSF49814.1"
                     /translation="MNDFPTLDDDFIDVEITNIGYADSMGLEGFLVLRSLDGEEFPIN
                     AFSGEVAKHILRFRQGDKNTIPTIYNLVEEIAVLQDLLLMEIRIYLSGSVLRANLYFR
                     GRKDNLILRNYRASDAIALASYYEVPIKVRKNLFREKIQQ"
     gene            1109..1939
                     /locus_tag="VLA74_03565"
     CDS             1109..1939
                     /locus_tag="VLA74_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49815.1"
                     /translation="MKIQRLVCIEGLRVILTSIISIGITFFLYSKLTNPDFSDTIIFT
                     ESFYNLSVAVISITFISSLGICFGLWKLYTSNNRYKKDLVSYISLPFKKNKKYILIMI
                     LIAIIYGLIYAFLSQIFVYNSTQLLPETASKYPYVKIIPCCNTIGYVPMTYIYLTAHF
                     FILLIPINMLLALIVSMLVGFNASLNIFSLRKLKEEKKSHLLGSVGATCGLFIGCPTC
                     AGSIITTIFGFSAGTASISLLAPFQTLFILLSIPVLLITPFLTARSLRVNFAKYHKKM
                     "
     gene            2383..3573
                     /gene="mpgS"
                     /locus_tag="VLA74_03570"
     CDS             2383..3573
                     /gene="mpgS"
                     /locus_tag="VLA74_03570"
                     /EC_number="2.4.1.217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050504 - mannosyl-3-phosphoglycerate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate synthase"
                     /protein_id="HSF49816.1"
                     /translation="MKLDLPRYTERFGSISLHGVQRVFELDSGTEKGKKISEHIVAIG
                     NEQISEIESKMAIVIPIRNERLKLLEGVLSGIPHNCMTIILSNSPRQPVDRYKLEKES
                     LEQFNRFANKNALILHQRDEGVAETLRDVGYTDLLGADNLVRNGKAEGMVLGMLLAKM
                     GGKDYVGFIDGDNYVPGAVNEYVKIFSAGIAMSNTPYKMIRVSWIYKPKISESGIYFS
                     KWGRVSEITNYFLNSLISYYTGFETEVVRTGNSGEHCISLKLAELMSFSSGFSVETYE
                     IVDLLEEFGGILPTDYQDAMDKGVEVMQVETRNPHFHEEKGDAHLKEMINGSLGCIYH
                     SKICHPKLQEKIIEELRNKSTIEEGGEPPILEKIKPFKDIDIKTFEEKLHEKANSLVH
                     WNGQ"
BASE COUNT         1473 a          560 c          640 g         1450 t
ORIGIN      
        1 atacccatat ttttccaatt tatctttgat tattgtttct cttatgattt ttttccccat
       61 attttcatga ctactagctg agataccgct accgattaaa acttcttcaa agagatgcga
      121 aaatggccca tgaccaatgt catgaagaag tgcagctaaa cgtagacctt caagttgatc
      181 ttttttttct atgtatcctt tatctagaag agttagtcct gctagtccag ctaaatgcat
      241 agttcccaat gagtgttcaa atcttgtgtg ttgtgcacta ggataaacta gatgggcacc
      301 agcaagctgt ctaattttcc tcagtctttg aaaaacaggt gtatcgataa tttctctttc
      361 taactctgta aatcggatat atctgtgaat gggatcagtt atttcgccta caaaatttaa
      421 cataattaaa cataataaaa aaaattatta attgttttta taatataaga tatatactat
      481 taattacttt tttaattgcg caagagtctg cagatataat attatttttg ctatattaag
      541 gatggtaagt ctattgttgt attttttctc tgaaaaggtt ttttctcact ttaattggaa
      601 cttcataata tgaagctaat gcaatggcgt cagatgcacg ataatttctc aatataagat
      661 tgtcctttct tcctcgaaaa tacaaattcg cacgcaatac tgaaccactt aaataaattc
      721 taatctccat taataaaaga tcctggagga ctgctatttc ctctactaga ttgtaaatcg
      781 tgggaatagt attcttatca ccttgtctaa atcttaagat atgtttagca acttcaccag
      841 aaaaggcatt aattggaaat tcttccccat caagtgatct taaaactaag aaaccttcca
      901 gtcccatact atcggcataa cctatattcg taatctctac atcaataaag tcatcatcta
      961 aagttggaaa atcattcata ttacaatttt tatatatatg aactaaaaaa taagtcttat
     1021 tttaattaat tcaattaatc cagtagtaat tgtttatgtg aaaaaattta attgcggtct
     1081 ctttttatct tatgattaaa tataaagaat gaaaattcaa agattggttt gtatagaggg
     1141 tttaagagtt attcttacca gtatcatctc gattggtatt actttttttc tctactcaaa
     1201 acttactaat ccagatttca gtgatactat tatttttaca gagtcatttt ataatctatc
     1261 agtagctgta atatctatta cttttatttc atcattggga atttgttttg gattatggaa
     1321 actttatact agtaataatc gatataagaa agatctggta tcctatattt cgttaccatt
     1381 taaaaaaaat aagaaataca ttttgataat gatcttaatt gcaatcatat atggtttaat
     1441 ttatgctttt ctttcacaga tatttgttta taattccact caattgctac ctgaaacagc
     1501 aagtaaatac ccatatgtta agatcattcc ctgttgtaat acaataggtt atgttcctat
     1561 gacctatatt tatttaacag cacatttttt tattttattg ataccaatta atatgttatt
     1621 agctttgata gtatccatgt tagtgggatt taatgcgtcg ttgaatattt ttagcttaag
     1681 aaaattaaaa gaagaaaaaa aatcacatct attaggtagt gtaggtgcaa cttgtggtct
     1741 ttttattggc tgtcctacat gtgcaggtag tatcataaca acaatattcg gattctctgc
     1801 aggcacggca tctatatctt tattagctcc tttccaaact ttatttatat tattaagcat
     1861 tcctgtgctt ctaatcactc cctttttaac agctagaagt ttaagagtga atttcgctaa
     1921 gtatcacaaa aaaatgtaat cacatgagtc gtgattatga agattaagga ttatttaagc
     1981 tatatttaac gatgtttaat aatcattaaa catataactt ttttttgaat ttttatattg
     2041 aaaaaagtac tgaaaaaagt attattattt gattgaatac tagttaaata acatatttct
     2101 tgttaaaata tattgaacga taaagatgta gagagagtat taaaatcatt aattgatgaa
     2161 agatctttaa ttagattgtt gaaattttta gaaaaagaag aatcgattta taattgtaga
     2221 aaaattaaaa taagagacaa tagaaagact ttcaaaaaca aattaaatca attttataat
     2281 tagcaaacta ttaaattgtc tgacttgtga aattgatagt aatattatga tattcattat
     2341 ttacttctta aattataaaa gttttactgg agttagaata aaatgaaatt agatttacca
     2401 cgttatactg aaagatttgg ttctataagt ttgcacggtg tccagagagt atttgaactt
     2461 gattcaggaa cggagaaagg aaaaaaaatt tccgagcata ttgttgcgat aggaaatgaa
     2521 caaatatctg aaattgaaag taaaatggct attgttattc ccataaggaa tgagagatta
     2581 aagttattag aaggagtttt aagcggtatt ccgcacaact gtatgacaat aattttatct
     2641 aatagtccaa gacaaccagt agacagatac aaattagaaa aagaatctct cgaacaattc
     2701 aataggttcg caaataagaa tgcattgatt cttcatcaaa gagacgaagg agttgcagag
     2761 acattaagag atgtcggtta tactgatttg cttggagcgg ataatttagt gagaaatgga
     2821 aaggcagaag gcatggtgtt gggaatgtta cttgcaaaaa tgggtggaaa agattatgtt
     2881 ggttttattg atggtgataa ttatgttcca ggagctgtta atgaatatgt aaagatattc
     2941 tctgcaggaa tagctatgtc caatacgcca tacaaaatga taagagtgtc ttggatttat
     3001 aaaccaaaaa tatctgaaag cggaatttat ttttcaaaat ggggaagagt atcagagatc
     3061 actaactatt ttttaaattc acttatttct tattataccg gatttgaaac agaagttgtc
     3121 aggacaggaa attctggtga acattgtatt tcactcaagc ttgcagaatt gatgagtttc
     3181 tcgtcgggat tctctgtgga gacttatgaa atagtggatt tattagagga atttggagga
     3241 attttaccta ctgattatca agatgcaatg gataaaggag tagaagttat gcaagttgaa
     3301 acaagaaatc cccattttca tgaggagaaa ggagacgctc atttgaaaga gatgatcaat
     3361 ggttctttgg gatgtattta tcatagcaag atctgtcatc ctaaattgca ggaaaaaata
     3421 attgaggaat tgagaaataa atccacgata gaagaaggag gtgaaccacc tatactagaa
     3481 aaaataaagc ccttcaaaga cattgatatt aaaacatttg aagagaagtt acacgaaaaa
     3541 gcaaatagtc tagttcattg gaatggacaa tgatggcact tcaatttttc gaacaaaaaa
     3601 tacaaataac gagtaaaatg tgttaacttt ctatgtttct ttagtttaaa aacataacat
     3661 acataggaat tactggtaat tagatgaatg aggcatgtaa aattcataat ttgcttttaa
     3721 tcattataat atgcatgatt tctagaactt tttattatga aaattaatat tgttatatta
     3781 taaatttaat attcattaat agtacatgac atagcagtca atttatgcac ctatgacaat
     3841 tcgcctgaca gttgatgagc taaagttggc tcttcccata tacttacttt ttatacaaag
     3901 agtacggtaa caattagggc ttaatttcat acttaaaaca tttctatcta acaatatact
     3961 attcttatat aacactacta aaatattaaa aatttataag tacataccac ttttagacct
     4021 atatagataa catgagttta ttttcattca caacaaaaat tggtaaaagc attaaaaata
     4081 aaatattatc gtatacaatc tcgatctttt cacttgcatt tat
//
LOCUS       DATIAS010000181         2311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1529915, whole genome shotgun sequence.
ACCESSION   DATIAS010000181 DATIAS010000000
VERSION     DATIAS010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529915"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..554)
                     /gene="pstS"
                     /locus_tag="VLA74_03575"
     CDS             complement(<1..554)
                     /gene="pstS"
                     /locus_tag="VLA74_03575"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSF49817.1"
                     /translation="MRNTQKIWIYLIAGIFFTANIPSMLEQTFAQSSNINGAGATFPF
                     PLIDTWRVEYQNIKPDININYQSIGSGGGVKQFIEKTVDFGATDAPLNEEEEKKATGA
                     VHIPETIGSVVIAYNLPQIGDAELKLTGPIIADIFMGKITKWDDPKIKEINPQLQLPS
                     NDITSVHRSDGSGTTFVFTDYLANV"
     gene            complement(1594..>2311)
                     /locus_tag="VLA74_03580"
     CDS             complement(1594..>2311)
                     /locus_tag="VLA74_03580"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49818.1"
                     /translation="LDLALVGDYSQIDLFGSTVNRCSKINSSLSIANQIIIGDNFYRI
                     LKSFPNIDNNYNFINNGECMITKTIGYTTYSIKKVSKLTLDNSSSCTTSTDDFTETKR
                     EKNLFFPQRNNNKRIILVDDDPDIIFTYESFLKDSGYEIISFTDPCKALNFIKDLKNF
                     NDLLVTLDIKMKDLNGFQLQQQIKSIDPTIKILFITVLDISAEILTIVPGLSKEQILM
                     KPVDRKILLSTVKKLLSSKI"
BASE COUNT          762 a          339 c          363 g          847 t
ORIGIN      
        1 acatttgcta aataatctgt aaaaacaaat gtagttccag atccatccga cctatgtacg
       61 cttgtaatat cgtttgaagg taattgtaat tgtggattaa tttcttttat tttaggatcg
      121 tcccatttag ttatttttcc cataaatata tccgcaataa tggggccggt tagtttcaat
      181 tcagcatctc ctatttgtgg caaattatat gctattacta cggaaccaat agtttctgga
      241 atatgtacag cacctgtagc ttttttctcc tcttcttcat ttaatggtgc atcggtagct
      301 ccaaaatcta ctgttttctc aataaattgc tttactcctc caccactacc gatagattga
      361 taattaatgt ttatatcagg cttgatattt tgatattcaa ctctccacgt atctattaaa
      421 gggaatggaa aagttgctcc tgcaccatta atattagaag attgtgcaaa agtttgttct
      481 aacattgaag ggatattagc tgtaaagaat atgccagcta taagataaat ccatattttt
      541 tgagtattcc tcatagttca actacgttat actttaatta atctattgag ataatagttg
      601 gtgtagatct atagtcaact gcttagaata tattcatgga tttaaagaag tatatactgt
      661 aattgcagga tcctcttttg catataatga accttaaatt ttgtttgtat ccttggatcc
      721 agtaaatcgg gatatctggt agaagtatcg ctcgtcattg catgaaaata cttgtctcta
      781 atagaagggc agtatttcaa aaattctgcc atatgtagta atccaaaaaa aattgatttt
      841 tatacacagt tattgaggct taaattggtc aaattaagcg ttaattttga ttatccaaca
      901 acatatcatc catactgggg agatgaagta tgaactcttg gacccattct tactttcttt
      961 ccttggtccg atgctctaaa aggtaataga ggtactggtc aagctacaag aacttctttt
     1021 ttagtacgtc aaaattgaat tgatttttgg aaggatcctt aaaaaaataa ttatatatgt
     1081 tctcaaggat ccataaaacg gtttgataat gattaagaac aagtaataag attctttgat
     1141 cctgatggtc ttgaattaga attagttgct catccatcag ctaaagaaaa tgacgaaaga
     1201 ttttggaaag atgttctaat ttcatatgaa aatggcttaa gaggatttta ttctgtaagt
     1261 ctgtcttaag agggatatga gcgtaattca gaattattaa atgaacttgg atacaaaatg
     1321 atagcaaatg aatgtatccg tttccgcttt caactaggag attcacaata tactatcggc
     1381 tggaatgcat atatcaattc aaatagatct agcaattttg catagataat cggttcaatt
     1441 tatcttcgtc aaggtaagga ataattacat tatagttaag tgctatgacg tcgggagtaa
     1501 tacccgtagc ggtgcaaaaa taagggtccg atatatggtt gtaaaagaga taatatttat
     1561 cctttgcttt acatcttaat aatgttaaca aagttaaatt ttactactta acaatttttt
     1621 aacagtgctt agtaatatct ttctatcaac gggtttcatc aatatttgtt ccttggataa
     1681 acctggaact atagttaata tttcagctga tatgtctaaa acagttataa atagaatttt
     1741 aatggttggg tctattgatt ttatttgttg ttgtaattga aatccattca aatctttcat
     1801 tttgatatcg agtgttacta gcagatcatt aaaattttta agatctttaa taaaattcaa
     1861 cgccttgcat gggtctgtaa aagaaattat ttcataacca ctatccttta aaaatgattc
     1921 atatgtaaaa atgatatctg ggtcatcatc gactaagatt attcttttgt tattgtttct
     1981 ttgaggaaaa aataaatttt tttccctttt agtttctgta aaatcgtcag tagaagtagt
     2041 acaactgcta ctattatcaa gagtcaattt actaaccttt tttatactat atgtagtgta
     2101 tccaattgtt ttggttatca tacattcacc attatttata aaattataat tgttatcaat
     2161 atttggaaag gattttaaaa ttctataaaa attatctcca ataattattt gatttgcaat
     2221 agataacgat gaatttatct ttgaacagcg gtttacagtt gagccgaata aatctatctg
     2281 gctataatca ccaactaaag ctaaatctaa a
//
LOCUS       DATIAS010000182         2750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1395381, whole genome shotgun sequence.
ACCESSION   DATIAS010000182 DATIAS010000000
VERSION     DATIAS010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395381"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..847
                     /locus_tag="VLA74_03585"
     CDS             164..847
                     /locus_tag="VLA74_03585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49819.1"
                     /translation="MKIIEQGLEESNAYSLFVYAIRSQVTRDYYLRRLRIFFNHINLD
                     PNLTMEERCNYFANKGTNDPSWAFNCIVKFLQYQKERVEKEEITGATLRNFIKAIKLF
                     CEMSDISIPWKKITRGLPKIRRHADDRSPTLEEIQQLCEYPDRRIKGIVYTMASSGIR
                     LGAWDYLRWKDIQPIERQGKVVAAKIIVYARDDEEYFSFITAEAYNELQKWMQYRKTV
                     VKKSMEIVG"
     gene            847..1164
                     /locus_tag="VLA74_03590"
     CDS             847..1164
                     /locus_tag="VLA74_03590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49820.1"
                     /translation="MRQLWDTKKGYYHHGTIKNPEKLKSSGIKRLMEDALWTQGLRKK
                     SDLKRNRYEFQTDHGLRKWFKTRCEMSGMKSINIEVLMGHSIGISDSYYKITEDELLT
                     EYL"
     gene            complement(1122..>2750)
                     /locus_tag="VLA74_03595"
     CDS             complement(1122..>2750)
                     /locus_tag="VLA74_03595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49821.1"
                     /translation="EFVKLNRKPYIHLIASEVEETKIGKVTKITVRNSNPIGMDVFTD
                     DQVKKIFDFDNYYSSKRNQYHISRGALGGAFKEILGIPYALAVEDPSINITNYEDWKY
                     PLQINISNKRLIDVRIEIVDKIRKKIKPKIDKKTPVTTGIDKDGNDYIEIITYIPTKV
                     LDYKYIDLVFNEYVLINTHIDFKSKLADSDIENEYEATQTIKDWKNKQSIYYYSLNEF
                     KDLIHSFESSNDSLNVYEEFIHTDFREGYTLEKTKEFETLTFGELKRDDRKIENIYQL
                     LKNNVLPIGERQSTSSRDLELPFDLKQNIRSKALCERFEQVYFGGLDSFAYKRIDEYF
                     RAKEEKKGGEAVSNNPVEYPFIVEIFLAESSDYQNRLHLIQSVNLSPTMYSNSFDDED
                     RNNKIFTFKTKNNNNNDIMESSHAITEILNKCGFSFDEKKHRKSVNFVFINLISPMID
                     YKTGGKIHLELKPFGSIAQDLYKFCKSPNTKGKNNKKNERPDSIRQELKYLIEEERVF
                     KIESNPDFLNIIDRWTQSTTFYRYSVNNSSSVIL"
BASE COUNT          959 a          380 c          404 g         1007 t
ORIGIN      
        1 atcaaaataa taaatattct aaaactatga tatacatatt tctacttcta tataactggt
       61 cccactttat agaagggttc aaatcccact ggccccattg tgatattagt tctcaaattg
      121 gattcgctcg aaaataagaa aataaggtga atcaaaaaaa taaatgaaaa taatagaaca
      181 aggtttggaa gaatctaatg catactcttt atttgtatat gcaattagat cacaagttac
      241 acgagattat tatttgagaa gattaaggat tttctttaat catattaatt tagaccctaa
      301 tcttacaatg gaagaaagat gtaattattt tgcaaacaag ggaacaaatg atccttcttg
      361 ggcatttaat tgcatagtta aatttttaca atatcaaaaa gagcgagttg aaaaagaaga
      421 gataacagga gcaactttac gaaattttat caaagcaata aaattatttt gtgaaatgtc
      481 ggatatttct attccatgga aaaagattac aagaggattg ccaaaaattc gaagacatgc
      541 tgatgataga tcaccaacac tagaagagat acaacaactt tgtgaatatc cagatagacg
      601 aattaaagga attgtgtata caatggcatc ttcaggtata aggctaggag catgggacta
      661 tttacgatgg aaagatatac agccaattga acgtcaaggc aaagtagttg cagcaaaaat
      721 tattgtttat gctagagatg atgaagaata tttttccttt ataactgcag aggcatataa
      781 tgaacttcaa aaatggatgc agtataggaa gacggtggtg aagaaatcta tggaaatagt
      841 tgggtaatga gacaattatg ggatacaaaa aaaggatatt atcatcatgg cactataaaa
      901 aatcccgaaa aactcaaatc ttctggtatt aagcgattga tggaagatgc tctatggaca
      961 caaggactaa gaaaaaaatc agatttaaaa agaaatagat atgaatttca gacagatcat
     1021 ggcttgagaa aatggtttaa gacacgctgt gaaatgtcag gaatgaaaag tattaacata
     1081 gaagtattga tgggtcattc cattgggatt tctgattcct attacaaaat aacagaagat
     1141 gaattattaa cagaatatct atagaatgta gtactttgtg tccatctatc aattatattt
     1201 aaaaaatcag gattgctttc aattttaaat acacgttctt cttctattaa atattttaat
     1261 tcttgtctta tagagtctgg tctttcattt tttttattat ttttaccttt ggtatttggt
     1321 gatttacaaa atttatataa atcttgagca attgatccaa atggttttaa ttctagatgt
     1381 attttaccac cagttttgta gtctatcata ggagatatta aattaataaa tacaaaatta
     1441 acagattttc tgtgtttttt ctcatcgaaa gaaaagccac atttatttaa aatctctgtg
     1501 attgcatgtg aagattccat tatatcattg ttattattat ttttagtttt aaaagtaaat
     1561 attttgttat ttctatcttc atcatcaaag gaattagaat acattgttgg tgataaattt
     1621 actgattgaa ttaagtgcaa tctattttga taatcagaag attcagccaa aaatatttca
     1681 actatgaatg gatattctac aggattgttt gatactgctt ctcctccttt tttttcttct
     1741 tttgctctga aatattcatc tattcgttta taggcaaaac tatctaaacc tccaaaatat
     1801 acttgctcaa aacgttcaca taatgcctta cttctaatat tttgttttaa atcaaatggt
     1861 agttctaaat cacgtgaaga tgtggactgt ctttctccta ttggaagaac attatttttt
     1921 aataattgat aaatattttc aatttttcta tcatctcgtt ttaattcacc aaacgttaat
     1981 gtttcaaatt ccttagtttt ttctaatgta taaccttctc taaaatctgt gtgaataaac
     2041 tcttcataca catttaaaga atcattactt gattcaaaac tatgtattaa atctttaaac
     2101 tcgtttaggg agtagtagta aatactttgt ttatttttcc agtcttttat tgtttgagtg
     2161 gcttcatatt cgttttcaat atcagaatca gcaagtttcg atttaaaatc tatatgagta
     2221 tttattaata catattcatt aaaaactaaa tcaatatatt tataatctaa tacttttgta
     2281 ggaatgtatg ttataatttc aatatagtca ttgccgtctt tgtcaatacc agtagtaaca
     2341 ggagttttct tgtctatttt tggttttatc ttttttctaa tcttatcaac tatttcaatt
     2401 ctaacatcga ttaatcgttt atttgaaata ttgatctgta atggatattt ccaatcttca
     2461 taatttgtaa tattaatact tggatcctca actgcaaggg cataagggat tcctaatatt
     2521 tctttaaatg ctccgcctaa tgccccacgg cttatatgat attgattccg tttgctgcta
     2581 tagtaattat caaaatcaaa tatcttttta acctgatcgt cagtaaacac atccatccca
     2641 ataggattgg aatttctaac ggtaatttta gtaacttttc cgattttggt ttcttctact
     2701 tctgatgcaa ttaaatgaat atagggtttt ctatttaatt tgacaaattc
//
LOCUS       DATIAS010000183         5024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1258163, whole genome shotgun sequence.
ACCESSION   DATIAS010000183 DATIAS010000000
VERSION     DATIAS010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5024
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1258163"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            424..618
                     /locus_tag="VLA74_03600"
     CDS             424..618
                     /locus_tag="VLA74_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49822.1"
                     /translation="MQANNTHSKIDEQKLNEFMQKAAGDIASTLSAMLLIIGDRLGLY
                     KTMADSGKPLTSEELAKKTR"
     gene            698..1510
                     /locus_tag="VLA74_03605"
     CDS             698..1510
                     /locus_tag="VLA74_03605"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49823.1"
                     /translation="MLPPEQSMALADENSPVYIHGAYQAIRSYFKDEDKFVEMFKTGN
                     GLRWGEHHHDLFEGTARFFKPNYVGNLVSSWIPSLEGIEEKLKQGGAKVADIGCGYGI
                     STILMAKAYPNSKFYGFDNHGPSIEQAREQARKEEGVTRNIEFYTVSANDESIGNDYD
                     LITFFDCLHDMGNPVGAMKFAKQSLKPEGTCMIIEPMANDKLEDNLNLVGRTFYAAST
                     LVCVPNSLADNGPALGAQAGEKRIKEVVEAAGFTKFRRATQTPFNIIYEAKH"
     gene            2244..2417
                     /locus_tag="VLA74_03610"
     CDS             2244..2417
                     /locus_tag="VLA74_03610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49824.1"
                     /translation="MIKIHTSTQWQDIFPNELQKKKDIECHDTIMNTYPNYLKIWWYK
                     VVKRFKTKLKRKF"
     gene            complement(2765..2920)
                     /locus_tag="VLA74_03615"
     CDS             complement(2765..2920)
                     /locus_tag="VLA74_03615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49825.1"
                     /translation="MIISRANSPPDEVNKHLKELRLKGLIIEMFPRPAGIDFTLYRIT
                     REGINAY"
     gene            complement(2917..3507)
                     /locus_tag="VLA74_03620"
     CDS             complement(2917..3507)
                     /locus_tag="VLA74_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49826.1"
                     /translation="MKKSTFIIIIFLISISVSSWLVSIRQYDTMMSSMMMFYNSPVAL
                     SLFVMIWTAGMAAMMFPAIIPMILFYNRLIDNNSSNSNSNSNSNSNTGTNHNSQTLHH
                     RNRDIRNDSSNNDNWDIIKENENKTNKSMIHSFRYILQSKSYQISLFLSSYLAIWAVT
                     GISLLIGWSVVLDALLLQLGMNDSQHLEPEERQMII"
     gene            complement(3636..4265)
                     /locus_tag="VLA74_03625"
     CDS             complement(3636..4265)
                     /locus_tag="VLA74_03625"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HSF49827.1"
                     /translation="MSNSAAIQKASWKLEGDYFEGCNCDIVCPCIFLSDPDEGNCYVT
                     CAWHIRKGNYENITLDNLNVVAMFHTPGNMVTGPKWKAALYIDDKASVEQTDALRRIY
                     SGQAGGFFAAIANFIGEILGIKSVTIEFGVDGKRRWIYIKNSVELEIEGIKGTDPNKE
                     SYIVNPAFTAVPGSDLVVAHSSKYSYNDHGLQWNNSGKNGFYCRFSYSP"
     gene            complement(4739..>5024)
                     /locus_tag="VLA74_03630"
     CDS             complement(4739..>5024)
                     /locus_tag="VLA74_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49828.1"
                     /translation="IRRRSLFKINSITKPPEERGKNIDNIKNMVESSTYRQLFFGIRD
                     DELLVFGHTHRPFKSLEKNVVNTGSWLKYATENCSYLKIKNEKIELLFYK"
BASE COUNT         1765 a          752 c          756 g         1751 t
ORIGIN      
        1 ttggttactt tccatccatc tagtttgcgc ttgatacacc atcttcttat cttttctaga
       61 tctcgtttat actgcatatg atgtaacact ccttactttt atcaagtaaa agagtgtaac
      121 agatgtcatg ggataataca agctatttat tcttccgata aatgttgcag attctataat
      181 tcttgtcttt tctccaataa aactgtcaaa tttagtaaat tatggataag aaaggaagaa
      241 tagctatctt gtatcaaaag actacgtact atcaaatata gtgaactcga gaaaactacg
      301 ggcccgtcgg gagttgaatg gtcatggttt cagtgttcat tatcataaag tattgacgta
      361 ctatcgttgt tttttctttt aaaaatttaa aagactaaat actatgtatt attcaatatc
      421 aaaatgcaag caaataatac ccatagtaaa attgatgaac aaaaactaaa tgagtttatg
      481 caaaaggctg ctggagacat tgcaagtact ctgagtgcaa tgcttttgat tattggagat
      541 agacttggtt tatacaaaac catggcagat tctggaaagc cccttacatc tgaagaatta
      601 gcaaaaaaga cacgctaatg aacgccttat tagagaatgg ttagcaaatc aagctgctgg
      661 aggatatata acatataatt catcagatgg aaaatatatg cttccacccg aacaatcaat
      721 ggcattagca gatgagaata gtcctgtgta tatccatgga gcatatcaag caatcagatc
      781 ttattttaaa gatgaagata agtttgtaga aatgtttaaa actggaaatg gcttgagatg
      841 gggagaacat catcatgatc tctttgaagg tactgcacga ttttttaaac caaattatgt
      901 aggaaatctt gttagttcat ggattccttc acttgaagga atagaagaaa aactaaagca
      961 aggaggagct aaagttgccg atattggatg cggatatggt atatcaacaa ttcttatggc
     1021 taaggcttat cccaattcta aattttatgg ttttgataac catggcccat ctattgaaca
     1081 agctagagaa caagcaagga aggaagaagg agtaacaaga aatatagaat tctatacagt
     1141 ctctgcaaat gatgaatcaa ttggcaacga ttatgatcta attacttttt ttgattgttt
     1201 acatgatatg ggtaatcctg taggagcaat gaaatttgca aaacagtcac ttaaaccaga
     1261 aggaacttgt atgataatag aaccaatggc taatgacaag ttagaagata atcttaatct
     1321 tgtaggtaga acattttatg cagcatctac tcttgtatgt gttccaaatt ctttagcaga
     1381 taatggacct gcattaggtg cacaagcagg cgaaaagaga ataaaagagg tcgtagaagc
     1441 agctggattt actaaattta gacgtgcaac tcagacacca ttcaatataa tatatgaggc
     1501 aaaacattag cagttaatat atctaataat aatagttttt tttatttagt ttaattacaa
     1561 atatgaatca ttataattaa aaataaaaga gtagggcagt atcaaaaaaa atttttgaat
     1621 attgctaatg aggataataa aattacttgt ttgtcaaatt atttactcaa ataagaggaa
     1681 tggaatgtat atgtattact atagaaaaat ttttgtaact tagaactaaa ttaatagaac
     1741 aagaagtaat tgatttattg ctaggaagaa tagaatctat gtttaagata ttactataaa
     1801 ctagatagta taatttttaa caaaataata aggattaaat gaactttatg tatagtagtt
     1861 taaaaatcta atacaaatta ttttagtaat ttatacttat aaaaaataat gtttaccaat
     1921 tgatagatac aaattcttat cctaagattt aaaattatat gaaaaaaaat ttttatttat
     1981 ttatttctta atttgtgtgt atttttttat atttggtatt ggtattatac tttatccatc
     2041 attgcaacaa aaaccacaat cacaattttt gtcaccaaag gattcacaga caactaccgc
     2101 tattgtttta gagttattat tattattcat actgaatcat ttgctttatc tttatataaa
     2161 gaggaataaa agtcataaaa tttgcttaat attacttatt tttttgaaaa atctatatat
     2221 cattcgtaga gaaattacaa tagatgatta aaatacatac ctctactcaa tggcaggata
     2281 tttttccaaa tgaattgcaa aagaagaaag atatagaatg tcatgatact attatgaata
     2341 catatcctaa ctatctaaag atatggtggt ataaagtagt taaaagattt aaaacaaaac
     2401 tgaaaagaaa gttttagtaa ctataactat aatcagcatc attaatttaa tatgtggttt
     2461 atctattcta aaaaatgaaa acaagatgat aaatttttat tataaataaa tatcaaaagt
     2521 atttttaaat ttatcgtata attaagcaat aacgatattt aaaattcatt gaacattgtt
     2581 aattgccatt acctatggga gttgaatagt catggtttca atgttcaatt actaattcct
     2641 taaatttttc ttcttcaatc tttctatgtt ctaaagcata actaaaatat aatcttaaag
     2701 accttctgag ttgttgccta ttgtagaata aattgatttt atatctatct aagatgttga
     2761 ttatttaata tgcatttatg ccttctctag tgatcctata taatgtaaag tctataccag
     2821 caggtctagg aaacatctct attatcaaac cttttaaacg taattctttg agatgcttat
     2881 tcacctcgtc aggtggacta ttagcccttg aaattatcat atgatcatct gccgctcttc
     2941 cggttccaga tgttgactat cattcatccc tagttgtaac aataatgcat ccaacacaac
     3001 tgaccatccg ataagcagag atatccctgt cacagcccag atagcaagat atgatgatag
     3061 aaagagagaa atctgatatg acttagattg taatatatac ctaaaactat gaatcatact
     3121 cttgttcgtt ttgttttcat tttcttttat tatatcccaa ttgtcattat tgctgctatc
     3181 attacgaata tcacggttcc tgtgatgcaa cgtctgacta ttatgattag tacccgtatt
     3241 gctattgcta ttgctattgc tattgctatt gctactatta ttatcaatga gtcgattgta
     3301 aaaaagaatc ataggtataa tagctggaaa catcatggca gccattcccg ctgtccatat
     3361 cattacaaat aatgataatg ctactggact gttataaaac atcatcatgg aagacatcat
     3421 tgtatcgtac tgccttatcg atacaagcca actagatact gagatcgata taagaaatat
     3481 aatgattatg aaggtcgatt ttttcatatt atgttaccat ttccttttgc taatagatct
     3541 agtagccttg ttcatgcaaa gcatatgatt ctgtcttgaa gtagattgtc tcctaaaagt
     3601 aaataacaat caccagtata ttattgtgaa tataattatg gagaatagct aaatctacag
     3661 tagaagccat tcttaccaga attattccat tgaagtccgt gatcattgta actgtattta
     3721 cttgaatgtg caactactaa atctgatcca ggaacagcag taaatgctgg attaactata
     3781 tatgactctt tattgggatc tgttccctta attccttcta tctcaagttc gactgaattt
     3841 tttatataaa tccatctacg ctttccatct acaccaaatt ctattgtaac tgattttata
     3901 cctagtattt caccaatgaa attggcaatt gcagcaaaaa atccacctgc ttgaccagaa
     3961 tagatccttc taagtgcatc tgtctgttct actgatgctt tatcgtcaat gtacagtgct
     4021 gccttccatt ttggtcctgt taccatgtta ccaggagtat gaaacattgc tacaacatta
     4081 aggttatcta gagttatatt ctcatagttt ccttttcgaa tgtgccaggc acatgtaaca
     4141 taacaattgc cttcatcagg gtctgataag aatatgcatg gacatactat atcacagtta
     4201 catccttcaa aatagtctcc ttcaagcttc cacgatgcct tttggatggc agcagaattt
     4261 gacatacgct gtagtattaa cgggttctat ataagatttt caatttacaa atcagtctaa
     4321 cgtatacgtt cgaatgtctt gtgtaagcat cattagtata ctaaatcttt cttttatatt
     4381 tttaaaataa ttttgttata gatacatatt cttgtttatc tatttccatt aactaaatga
     4441 gctcaatcac taaaattcta aagcttagag ggcttcgagt atggcatgta gttgggatcg
     4501 gtaaacagat atttattaat ttagtaactt atttgaaatc ttcatcatat tatttgtgaa
     4561 gaatattaaa aaataacaaa aagaatcagt gggatttaaa ccattctata gagtgggacc
     4621 agttaataga aaaaattgca tatctcatac tggaggacga aaagtgaagt aataattgat
     4681 tgtaatggta atgtataatt ggtgttgtaa tctgctctcc tagaccttaa taaaattact
     4741 acttataaaa caataactca atcttttcat tttttatttt aagatacgaa caattttctg
     4801 ttgcatattt taaccatgaa ccagtattaa ctacattttt ttctaaactt ttaaaaggtc
     4861 tatgggtatg accaaaaact aataactcat catctctaat tccaaaaaag agctgtctat
     4921 aagtactaga ttcgaccata tttttaatat tatctatatt ttttcctctt tcttcaggtg
     4981 gtttcgtaat tgaatttatt ttaaataatg atcttcttct aata
//
LOCUS       DATIAS010000184         2212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1530373, whole genome shotgun sequence.
ACCESSION   DATIAS010000184 DATIAS010000000
VERSION     DATIAS010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530373"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VLA74_03635"
     CDS             complement(<1..326)
                     /locus_tag="VLA74_03635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49829.1"
                     /translation="MKYFNDVYWLNTLPVVGQPIYPVIFDIAELTKAKLKTNLISSTC
                     SEMARSYEELLELGLVGKSDMRIDDMNQYNYFSMSYILGKLSVGISSLGNNFGIIIHN
                     SDLYDDA"
     gene            411..659
                     /locus_tag="VLA74_03640"
     CDS             411..659
                     /locus_tag="VLA74_03640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49830.1"
                     /translation="MSKEDINIEELANSIAKRVLANLGEKDLAKSDDLKVNASELRMA
                     ISARRPYDCKGSAFTCGTHSCSGASVSCNDNFGCTVQF"
     gene            670..1875
                     /locus_tag="VLA74_03645"
     CDS             670..1875
                     /locus_tag="VLA74_03645"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF49831.1"
                     /translation="MNCSYDITEDVQSSLLSSNPNLEYASEKISSNLQVSMEDANKLI
                     YNIVLQINKNLFPSVNRMELILTEGCNLGCSYCFEKNMLGYKKMPLSIAKKAVDILFD
                     YSRDDPILSITHFGGEPTLNFEAIKYATEYAEEKARKFKKTVEFHMTSNGVLINEEMA
                     DYFARHHIMVLLSLDGLRLSNDKFRKDKFGNGTFDKVLKTLDLLKKTQRWVGIKMTIM
                     PQNAGNLYSDVIGLYALGVNQFIIGYASGIQWNNQELDIYQEQLSKVYEWYKNRSHDG
                     LRISEFDESHDKVFFGCQAGKNGITITVDGQISPCARILALDNKQLLAKLGDIKFGIY
                     NINNRSELVTCKKVRRECSNLGIDKEFQGGCFAINHEDNKDLFKPSLQKHKFSLIQKQ
                     VCAGCSCKS"
     gene            complement(2030..>2212)
                     /locus_tag="VLA74_03650"
     CDS             complement(2030..>2212)
                     /locus_tag="VLA74_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49832.1"
                     /translation="HLNLIEVRWMWLQRKAINNSTFRNESDIGKAVSDWTCNYNNSHG
                     NITRDSLHNELMCLFT"
BASE COUNT          800 a          289 c          379 g          744 t
ORIGIN      
        1 gcatcatcat aaagatcaga attatgaata ataattccaa agttattacc aagagaagat
       61 ataccaacag aaagttttcc taaaatatag gacatagaaa aatagttata ttgattcata
      121 tcatctattc tcatatcaga ttttccaact aatcctaatt ctaataattc ttcgtatgat
      181 cttgccattt ctgagcaagt tgaactaatc aaatttgtct ttaatttagc cttggttaat
      241 tcagctatat cgaaaattac aggataaatt ggctgtccta ctacaggcaa tgtatttaac
      301 caatagacat cattaaaata tttcatttat taatatattt ttataaatat gaatataaat
      361 ataattttat tttaaaaaat ctttaaataa cacaatgttt tatgcaattc gtgtcaaagg
      421 aagacattaa tattgaagaa ctggctaatt ctattgcaaa gagagtatta gctaatttag
      481 gcgaaaaaga tctcgcaaag agtgatgatt taaaagttaa cgctagcgag ttgcgcatgg
      541 ctatatcagc tcgaagacca tatgattgta aaggtagtgc gtttacttgt ggaactcata
      601 gttgttcggg cgcctcagtg tcttgtaatg ataatttcgg ttgcactgta caattttagg
      661 taatatttta tgaattgctc atatgacatt accgaagatg ttcaaagtag tcttctgtct
      721 tcaaatccaa acttagagta tgcttcagaa aaaattagtt caaatcttca agtatctatg
      781 gaagatgcaa ataaacttat ctataatatt gtattacaaa taaataaaaa tcttttccct
      841 tctgtaaatc gaatggaatt aattttaact gaaggatgta atttgggatg tagttactgt
      901 tttgaaaaga atatgcttgg atataagaaa atgcctttaa gtatagcaaa aaaagctgtc
      961 gatattctgt ttgattattc tagggatgat cctattttaa gtattaccca ctttggtggc
     1021 gaaccgacat tgaattttga ggcaataaaa tatgcgactg aatatgcaga ggaaaaggca
     1081 agaaaattta aaaagactgt tgaatttcat atgacaagta atggagtatt aattaatgag
     1141 gaaatggcag attattttgc tagacatcat atcatggtct tacttagttt agatggatta
     1201 aggttaagta atgataaatt tagaaaagat aaatttggta atggtacttt tgataaggta
     1261 ttaaaaactc ttgatctttt aaagaaaaca caaagatggg ttggaataaa aatgactatt
     1321 atgccacaaa atgctgggaa tttatattca gatgtaattg gactatatgc tctaggcgta
     1381 aatcaattta ttataggtta tgctagtggt atccaatgga ataatcaaga acttgacatc
     1441 tatcaagaac aattaagtaa agtgtatgaa tggtacaaga atagatctca tgatggttta
     1501 cgtatttcgg aatttgatga aagtcatgat aaggttttct ttggatgcca agcaggtaaa
     1561 aatggcatca caataacagt cgatggtcaa atttcacctt gtgcgagaat tttagcatta
     1621 gataacaaac aacttttagc taaacttggt gatattaaat ttggcatata taatataaat
     1681 aacagatcgg aattagttac atgtaaaaaa gtgagaagag aatgttcaaa cttaggtata
     1741 gataaagaat tccaaggagg atgttttgca ataaatcatg aagataataa agatctcttt
     1801 aaacctagct tacagaaaca taaattctcg ttaatacaaa aacaagtctg tgcaggatgt
     1861 agttgtaaaa gctagtttat cttgcgaccc atgatatttg ctgatcatca tatactatat
     1921 cgtcggtact agatcatact caataattaa ggataatagc taaggctaga tattttggaa
     1981 tctaggaagg taagttttat tctactgttg ttcagtagga tgttaacagt tatgtgaaca
     2041 aacacatgag ttcattatgt aaactatctc tagttatatt gccatgagag ttattgtagt
     2101 tacatgtcca atcagatact gcttttccaa tatcagattc atttctaaat gtagagttgt
     2161 taattgcttt tctctgtaac cacatccatc taacctctat tagattcagg tg
//
LOCUS       DATIAS010000185         3808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_32258, whole genome shotgun sequence.
ACCESSION   DATIAS010000185 DATIAS010000000
VERSION     DATIAS010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3808
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32258"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2042)
                     /locus_tag="VLA74_03655"
     CDS             complement(<1..2042)
                     /locus_tag="VLA74_03655"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HSF49833.1"
                     /translation="MINHVETTPEMVSNVYEKSRKNISIYKEKIKHGALTLSEKILIG
                     HLFDIEKDDQNQNLERGKSYVFLRPDRVALQDVTGQMTLLQFMQSGLKRTTLPTTVHC
                     DHLIQARMEGVSDTQAALYENNEVYRFLESASRKCGVGFWKPGAGIIHQVVLENYAFP
                     GGLMIGTDSHTPNAGGLGMIAVGVGGLDAAETMAGMPWEILYPKRIGIYLTGELNGWT
                     APKDVILYVAAKLTVSGGTNAIIEYFGPGSKSISCTGKATITNMGAEIGATCSIFEYD
                     QRMETYLRSTNRSEIADIANKNMDILTQDTDIENEPEKYFDQVIRIDLSSLEPHIVGP
                     HTPDLARPISQMKNDVLINNYIDKISVALIGSCTNSSYEDMSRAASIAEQADQNGVKT
                     KTSLLVTPGSEMIRATIERDGQIKVLKDIGATVLANACGPCIGQWRRPEIKSGEPNTI
                     ITSYNRNFPGRNDGKRETMNFIASPEIVIALALGGRLSFNPLTDIIEGKDGTAFILKP
                     PQIAPEVPSKGFENVKDVYVEPADDPDNVEVIIDNNSERLQKLEPFLPWDGKDFIELP
                     ILAKVKGKCTTDHISPAGAWLMYRGHIDRISDNLLLGAVNSFHDEQIGNGKNIFNGRI
                     ESYPHIAREYKEKGFKWVIIGDKNYGEGSSREHAAMTPRYLGCAAVISKSFARIHET"
     gene            2721..3038
                     /locus_tag="VLA74_03660"
     CDS             2721..3038
                     /locus_tag="VLA74_03660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49834.1"
                     /translation="MEYKIHLLAITSILAFALIIAAGMSITAFGSVSPPLQKEDDGND
                     EPPETLQCQPGRHVDPTTQQCVPDETKITCPPGQLFDQTLKQCITDKPIINDSLPGPE
                     PLV"
     gene            complement(3397..3528)
                     /locus_tag="VLA74_03665"
     CDS             complement(3397..3528)
                     /locus_tag="VLA74_03665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49835.1"
                     /translation="MSENKKEKEETNNKLENIKDIKHNNKLQDEFKEWEVESTESAG"
BASE COUNT         1234 a          686 c          500 g         1388 t
ORIGIN      
        1 gtttcatgaa tcctggcaaa acttttagag ataactgcag cacatcccaa atatctagga
       61 gtcattgcgg catgttccct gctgctacct tccccatagt ttttatctcc tattatgacc
      121 catttgaaac ctttttcttt gtactccctt gcaatatgag gataagactc tattcttcca
      181 ttgaaaatat tctttccatt tcctatttgt tcatcatgaa atgagtttac agcacctaat
      241 agcaaattat cacttattct atcaatatgt cctctataca ttagccatgc gcctgctgga
      301 gatatgtgat cagtagtaca ttttcctttt acttttgcca gaattggaag ttctataaag
      361 tctttgccgt cccaaggcaa aaatggttcc agcttttgta atctttcact attgttatca
      421 attattactt cgacattatc tggatcatct gcaggttcta cataaacatc cttgacattt
      481 tcaaatccct ttgatggaac ctcaggagct atttgtggag gtttgagtat aaatgcagtt
      541 ccatcttttc cttcaattat atctgtaaga ggattaaaag atagtctgcc gccaagagct
      601 aatgcaatta caatctcagg actagctata aaattcattg tttctctctt tccatcattt
      661 cttccgggaa aatttctatt gtatgatgta ataatggtat tcggttcacc acttttgatt
      721 tctggtcttc tccactgacc tatgcacgga ccacaagcat tcgctaagac agtagcacca
      781 atatctttga gtacttttat ttgtccatct ctctcgattg ttgctctaat catctcggat
      841 ccaggtgtta ccaaaagaga agtttttgtt ttaacaccat tctgatcggc ttgttctgca
      901 atacttgctg ctcttgacat atcctcataa gatgagtttg tacaactacc aatgagtgct
      961 actgaaattt tatctatata gttatttatt aaaacatcat ttttcatctg tgaaattggt
     1021 ctcgccagat ctggtgtatg aggcccaact atgtgaggtt ctaaagagga taaatcaatt
     1081 ctaattactt gatcaaaata tttttcaggt tcattttcaa tatcggtatc ttgggttaaa
     1141 atatccatat ttttgttagc aatatctgca atttcagatc tgtttgtaga tctaaggtat
     1201 gtttccattc tttgatcata ttcaaaaatt gaacatgtag ctccaatttc tgcacccata
     1261 ttagttattg tagcttttcc agtacaacta attgatttag aacctggacc aaaatattct
     1321 attattgcat ttgtaccacc agaaacagtt aattttgcag ctacatacaa aataacatct
     1381 tttggagctg tccatccatt taactctcct gtaagataaa ttcctattcg ttttggatac
     1441 aatatctccc atggcatacc tgccatagtt tctgcagcat ctaaacctcc aactccgaca
     1501 gctatcatcc ccaatcctcc tgcattaggg gtatgtgaat cagtcccaat cattaaacct
     1561 ccaggaaagg catagttttc caaaactact tggtgaataa ttcctgcccc gggtttccaa
     1621 aaaccaaccc cgcattttct tgaggcagat tctaaaaatc tataaacttc attattctca
     1681 tataatgcag cctgcgtatc tgatactcct tccattcttg cttgaattaa atgatcgcaa
     1741 tgaacagtag tgggtaaggt tgttcgtttt aaacctgatt gcataaattg taaaagagtc
     1801 atttgtccag ttacatcttg taatgcaact ctatctggac gtagaaatac ataacttttt
     1861 cctctttcta aattttgatt ttgatcatct ttttctatgt caaaaagatg acctatcaat
     1921 attttttcac ttaatgtaag agctccatgc ttgatttttt ctttatagat tgaaatattt
     1981 ttccgagatt tttcataaac attagaaacc atttcaggtg tggtttctac atggtttatc
     2041 atactcattc tttttacaat attaatttat caatacggat ataagaaaat atcttcataa
     2101 tctggtcgtt gatatgtgag ctaaaaaaat taaagttttt gcttcatctt cttctggata
     2161 tttgaccaaa caagaaatac aataagtttt ttataaaaag tatactagac tagtccattc
     2221 ataaaatttc aaaatattta tagattagta gaagattaga atctaaatat atacatctat
     2281 tggaattaca aacctaaatg agtcaatttt ttatatatcg attatataag gttttttata
     2341 gctaaacata ataaaatcat tctagagttt taatgctaat gttatatgta tctttaaata
     2401 tcaattttat acatgtttga tattagtcta cattataaca agcacaattt tatttttcta
     2461 accatggtta taaacgggcg ttaatagttt tgtaattatc ttggtagtag tatatgtata
     2521 taatgtaaag taaaggtgag tgtttggatt ggtttacttc taaatgaaat tgttcataga
     2581 taataaaaca aaataactag ttttagttta cataaataac ttacaaacta atgtctttac
     2641 aaaactcaat ttaatatgaa cttatgacca atctctcatt tttctcaaat tattatatat
     2701 tttaataatc aaaaaagact atggaatata aaatccattt attagcaatt acatccattc
     2761 ttgcatttgc tttaattata gcagcaggaa tgtcaataac agcatttgga agtgtttcac
     2821 caccactaca aaaagaagac gacggcaacg atgaaccacc agaaacatta caatgtcaac
     2881 caggtcggca cgttgatcca acaacacaac aatgtgttcc agatgaaaca aaaataacat
     2941 gtccaccagg tcaactcttt gatcaaacat taaaacaatg cattacagat aaaccaataa
     3001 tcaatgactc acttccaggg cctgaaccat tagtttaaga aaataaattc tctaccctat
     3061 ttaataatat acaaaattca tcccataaac aagaagacaa taacaaacaa aaacaaataa
     3121 aaaaacattt tcatccccaa atttctttta tttcagatat attttatgta ctttcgatta
     3181 aaataagtaa ttgatcagat agatgaacca atatatcttc ttcttttacc ttgtaattat
     3241 ctccccttct cttcctattc tgtatgtagg gacactcaca tgctaggcat aactcttttt
     3301 ctataaaagt agcaaggatg gaatattaat aaaataatat aatataataa taattattaa
     3361 taatatatga aatatataat aggaaagtta gtttacctat ccagctgact cggtggattc
     3421 tacttcccat tctttaaatt catcttgtag tttattatta tgtttaatat ctttaatgtt
     3481 ttctagttta ttattagttt cctctttttc ttttttattt tctgacatat atattatcca
     3541 tgaattcatg taaaataaat tgtttaccaa tttcataaaa tcaggaaatc ccaactcttt
     3601 tcaatattat taaattttta tagaatattt ctattttatc gagattttaa tgcctgatag
     3661 ctcctatagt gagtcctcgg atcatttgtt tttgaaatat tagcatcaat actaaaattg
     3721 gaactaaagc tatgtttatt ccagcagtta agtagcccca ttcgattcta tatagcgaaa
     3781 caaattcata taatgctact tgaaaaac
//
LOCUS       DATIAS010000186         2011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1530781, whole genome shotgun sequence.
ACCESSION   DATIAS010000186 DATIAS010000000
VERSION     DATIAS010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530781"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VLA74_03670"
     CDS             complement(<1..218)
                     /locus_tag="VLA74_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49836.1"
                     /translation="MLVIKTHYCLPFHKAVIVCLIAVTFGINLLLGFVSLQNSFAQEF
                     DTNGDGVVDELDDQSASATSSTDEIQMDT"
     gene            963..1211
                     /locus_tag="VLA74_03675"
     CDS             963..1211
                     /locus_tag="VLA74_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49837.1"
                     /translation="MVCKGICSRHKAMRPKDGGMRYLKGQKRCQVCQVFIYWRGSYCP
                     CCGYKLRVNPRNGKFKLTLRNKNNNKKQHKESITNLLD"
     gene            1528..1872
                     /locus_tag="VLA74_03680"
     CDS             1528..1872
                     /locus_tag="VLA74_03680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49838.1"
                     /translation="MTTLQLQESCMVEIKKELDLNAQTNTVMATATMNEPSAEGEVYE
                     GWFEDKGDASGYALSVGKFDEKDNTLTINQTMVNPFTYSVFYVTAEPVDDPDPKPSDV
                     VVGTELPTPFGQ"
BASE COUNT          735 a          284 c          297 g          695 t
ORIGIN      
        1 gtatccattt ggatttcatc agtagaggat gtagcagatg ccgattggtc gtctagttca
       61 tctactactc catcaccatt ggtatcaaac tcctgagcaa aagaattctg aagagaaaca
      121 aaacctagaa gtaagtttat tccaaaagtg acagcaatta gacatactat tactgcttta
      181 tgaaatggta aacaataatg cgtcttaatt actaacatta tggacaccct acattcattg
      241 tttataaata ttctctattt agagtaattt aggattagta aaaattatgg aggatgcttt
      301 ccgtgtatga ttgattgatt gatacataaa aaacaaggct cgtttttatt ttcttctact
      361 atttctattt ttataaattt ataataaaaa atagtaatta ttacaattga attaaataat
      421 taaataatga aatttttgaa atgaggtcaa aaatgacctc aagaccatcg aaccatcaac
      481 tacaagaaca gcaaaaccaa gttaccaaca aaatattatt acaaacacat ttgaagaaac
      541 catcaaacat aacttcttat caaaactttg cgctaaaatc caaagaagtt aaaagacaat
      601 tttttgtcta ttagaatata attaatgtat taaagtattg acatgtttta taaaaacttc
      661 tattggaaac tcttttgaaa cataacattc ttctccaaat tcaggatgta tttctgctaa
      721 cactttgtaa tttaagacgg attaggtcat aaagcatact ctaaattctt ttggtgtatt
      781 ttcaactttt tttgatattt tatgtaattt atcgtaaaga ttgaatccat ccattacaga
      841 cattttaaaa ccaaattgat ctagaaatat agttatttaa taacaattaa tctttttttt
      901 aagtatctat agatagatag gttattatga ttttactgat tccttgtgaa tgtattatat
      961 atatggtgtg caaaggaata tgttcacgcc ataaagcaat gagacctaaa gatggaggca
     1021 tgcgctattt gaaagggcaa aaacgctgtc aagtttgtca ggttttcatt tattggcgag
     1081 gttcatactg cccatgttgt ggctataaat taagagtcaa tccaagaaat ggtaaattta
     1141 aacttacgtt aagaaataaa aataataata aaaaacaaca caaagaatct attacaaatc
     1201 tgttagatta aaaagaataa aatactttat aaaataatct tattatattt cagtactcat
     1261 attttaatgg gggctgtggt tgataggaga ctgtttcgct cctcgtctcg ttatagacat
     1321 gctgcctaat attgagccag tcctactttt aagatagaat tattaagatt aatcctgata
     1381 gataagaatt taaactaaga aatttattga aaattaatga aatcaattat tattctatct
     1441 ttatcatata ttgtaatgct gctgttaagt ataggagtta ctagtcctac tattactatt
     1501 gtattttaac agcaaacatc tttagatttg acaacactcc aactgcagga aagttgtatg
     1561 gtggagataa aaaaggaact cgatctaaat gctcaaacta atactgttat ggcaactgct
     1621 acaatgaatg aaccatcagc agaaggtgag gtatatgaag gatggtttga agacaaaggg
     1681 gatgcctcag gttatgctct tagtgtaggg aaatttgatg aaaaagataa cacacttact
     1741 ataaaccaaa caatggttaa tccatttaca tattctgtat tttatgttac tgctgaacca
     1801 gttgatgatc cagatccgaa gccctctgat gtagttgtcg gaacagaatt acctactcca
     1861 tttggacaat aaataacttt ttattttttt attttttaat ttatagattt tttaatttat
     1921 taattaattg gtctactatt actctagagg tggacaacgt aagcaagtta tatcataata
     1981 aaattataaa tatcatcatc aatctattat t
//
LOCUS       DATIAS010000187         2505 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_986780, whole genome shotgun sequence.
ACCESSION   DATIAS010000187 DATIAS010000000
VERSION     DATIAS010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986780"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VLA74_03685"
     CDS             <1..444
                     /locus_tag="VLA74_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49839.1"
                     /translation="AWREGLSTADAYWVFPDQVKKGAPTGQFLPKGSFVIEGKRNYIK
                     GINLKLAFGVFKEQDSYNMICGPQNSVKIKSIIYVILLPGGIDAMNAAKKLKTELIKN
                     LDKINNEKNDTLIEFLKQTSVDDIIRLLPPGKMKLFSIEKGDKYI"
     gene            501..1088
                     /locus_tag="VLA74_03690"
     CDS             501..1088
                     /locus_tag="VLA74_03690"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF49840.1"
                     /translation="MDERLGSKHRDANMPTKVLVRDVMNSPIISASPDSNLKEISKKM
                     KQERIGSIIIFDGENPVGLVTDWDIVSDGLSKDVLPSSIKASDIMKELHTIEGEATIT
                     EAARMFRKHNIKRLGVVYKNKVVGIISASDVIAVTPELIDVVSEKSALLRGEIGLPRG
                     NISGYCDECGEWSDLLEYTDGTFNCEECRGDSSVE"
     gene            complement(1573..2037)
                     /gene="pyrI"
                     /locus_tag="VLA74_03695"
     CDS             complement(1573..2037)
                     /gene="pyrI"
                     /locus_tag="VLA74_03695"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HSF49841.1"
                     /translation="MSEINQLLVRRIEQGTVIDHIDPGKAFNVLKTLNITGSDGNIVT
                     VALNVPSSKRQKKDIIKIENKFLENKDTDRIALISPHATINIIKNYKVAEKRKIQVPD
                     YITGIFKCSNINCITNEDKNIVPTIVILDKTDIVLKCKYCSRILDINDLEEI"
     gene            2206..>2505
                     /locus_tag="VLA74_03700"
     CDS             2206..>2505
                     /locus_tag="VLA74_03700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49842.1"
                     /translation="MESCSYHNSFFDERCEKCKKEYLLLKGLEVKENWLIKSIDGIGN
                     TRKLHYKEFNEEKAKELYEKLFVYYLKKIGDEYEASNKAKTVIKKQCNIRNLTHWS"
BASE COUNT          903 a          331 c          408 g          863 t
ORIGIN      
        1 gcatggcggg aaggattgtc tactgcagat gcatattggg tatttccaga tcaagtgaaa
       61 aaaggtgcac ctacaggaca atttcttcca aaaggctcgt ttgtgataga aggaaaaaga
      121 aattatataa agggaataaa tctaaagttg gcattcggag ttttcaaaga acaagattcg
      181 tataatatga tctgtgggcc acaaaattct gtaaagataa aatctataat ttacgttatc
      241 ttgttgccag gaggaattga tgcaatgaat gctgcgaaaa aattgaagac agaattgatc
      301 aagaatttgg ataaaattaa caacgaaaag aacgatacct taattgaatt cttaaaacaa
      361 acttcagtcg acgatataat aagattatta ccgccaggta aaatgaagtt attttctata
      421 gagaaaggag ataaatatat ctgactctaa ttcttgaaat tgtagtaaag taattaaact
      481 aatatgacaa aataaagaat gtggatgaac gtttaggaag caaacatcgt gatgcaaata
      541 tgcccacaaa ggttttggta cgtgacgtta tgaacagtcc tataatttct gcatctcctg
      601 attctaattt gaaggaaatc tcaaaaaaaa tgaaacaaga aagaataggc agtataataa
      661 ttttcgacgg cgaaaatcca gttggattag tcactgattg ggatatagtt tcagatggtc
      721 tttctaaaga tgttctgcct agttcaataa aagcttctga tattatgaag gaattacata
      781 ctatcgaagg tgaggcaaca attacagaag cagctaggat gtttagaaaa cataatatca
      841 agagactagg agtagtttat aaaaataaag tcgtaggaat catctctgct tccgatgtga
      901 ttgcagtaac tcctgaatta atcgatgttg tttctgagaa gtcggctcta ttacgaggcg
      961 agattggtct acctcgtggt aatatttctg gttattgtga tgaatgtggg gaatggtctg
     1021 atttattaga atatactgac gggacattta attgcgaaga atgcagagga gattcttcag
     1081 tagaatagaa tcgaatagac aaagcacacc tcaaaatttc atgtattttt tctttgttct
     1141 tttaccaaaa aatccacttc cgaatttatt aatgtagatg ataaatttct ttgtcaatga
     1201 attgaactat tcataaaatt ttcgtaagaa aattagaaaa gaaaatccaa tattttaata
     1261 atattcgaat actgatttat tattgatatc aaaaattatg gataaatttg gtaagaacat
     1321 actatttctg ttaattatcc ttaacaaatt tcaagaaaca tagttcctca ccaaatttta
     1381 tttaacttct accaacggct ctataagaat agtgatattg atgattgcta ttaattacta
     1441 atactggaaa aatgtcagtt aaaattgtta aatgaattta ttttaattag catgagtttc
     1501 ctttccttac aaagtaattt tattttcttt ttttgttata ttatataaat ggcttctatg
     1561 gtgactaatg tttcatattt cttccaaatc attgatgtct aatatcctgg aacaatattt
     1621 acattttaat acaatgtctg tcttatccaa tatcactata gttggaacga tatttttatc
     1681 ttcgttagta atacaattaa tattagaaca tttaaaaatc ccagtaatat aatctggtac
     1741 ttgtattttg cgtttttcag ctaccttgta attttttata atatttattg ttgcatgtgg
     1801 cgatataagt gcaattcgat ctgtatcttt gttctctaag aatttatttt caatttttat
     1861 gatatctttc ttttgtcttt tgctgcttgg tacatttaat gccacagtaa ctatgtttcc
     1921 atcacttcca gtaatattaa gagtctttag aacattaaag gcctttccag gatctatatg
     1981 atcaatcacg gttccttgtt ctattcgtct tactaaaagt tggttgatct cggacatcaa
     2041 gtaaaataat ctctatttta tctattaaat cttagtattt gatatttaat gtttgataga
     2101 tataatgttt tatccacaaa tataaaataa ttaacacgat tccaacgtaa aataaacact
     2161 atcttataac tcaatatttt tatatgttat ttcctgtact tacatatgga gtcttgttct
     2221 tatcataact ctttttttga cgaaagatgt gaaaaatgta agaaagaata tctcctttta
     2281 aaaggattgg aagtgaagga aaattggcta ataaagtcga tagatggaat tggaaataca
     2341 cgaaaactac attataaaga gtttaatgaa gaaaaagcaa aagaacttta tgaaaaatta
     2401 ttcgtatact acttaaaaaa aataggagat gaatatgagg cttcaaataa agcaaaaaca
     2461 gtgataaaga aacaatgtaa tataagaaat ttgactcatt ggtct
//
LOCUS       DATIAS010000188         3315 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1667902, whole genome shotgun sequence.
ACCESSION   DATIAS010000188 DATIAS010000000
VERSION     DATIAS010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667902"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..965
                     /locus_tag="VLA74_03705"
     CDS             27..965
                     /locus_tag="VLA74_03705"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HSF49843.1"
                     /translation="MKIFLILAVLIITLTLSNVYGQQDDNAINENPAKGKIKVVASFY
                     PFYEFVKEIAGTNIVLKSVIPFGFEPHDWEISPQKISDLMEADMIIYSGIGFDAWLGD
                     KQFGNSTLVDVSKDLKLIRGQDLSENSRNDERKYGYDSHIWLDPILVKNISKTISDAL
                     IKIDPNNTDAYLQNTENFNQQLDILDSLIKTSLTHCELKDFITFHQAFQYFANRYGLN
                     QHAVHEGSQEGEILPQQIIKIISLAKDLGIDTIYSEELKDPRLSQTLASEIPNGKVLL
                     LSPIEGIDQQEQKKDISYIEKMKMNLENLKQGLKCK"
     gene            2079..>3315
                     /locus_tag="VLA74_03710"
     CDS             2079..>3315
                     /locus_tag="VLA74_03710"
                     /inference="COORDINATES: protein motif:HMM:NF039608.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49844.1"
                     /translation="MTFPIKSFSFSQQNFEQLAIDQPAIAQLPSPDGKNKIGYIILST
                     NVINDNGGNKQPSDFTINIHDTSAFPSSLKAVPSPQVQIISVNEGKYSISVNNVSGYN
                     ISLENQCEGVVNYGEVRSCLIIADDDNISSSKLPILPLSLSDLLLPDNRGEENEDIKA
                     KIAAIPKPTDPSKVGFLLISTNVINDNGGNKQPSDFTINILGTPAFPSSFKAASSKMI
                     QVVAVSEGQYSVSVDNSVAGYQTFLQFECQGQINPNEIKTCLIRLNDISSPIPCPLGQ
                     HLENGQCVPDSPQCPLGQHLENGQCVPNPPPTGETFPVQNIIWMYDSKQTLSKDISLP
                     SGETHPTDKVLLSSGASGVNAHPIKNGWLEVQSGGGNGRVYWNYHELPQFSQLDTAGF
                     NNVMTGTFKLKPGIENLSIK"
BASE COUNT         1221 a          504 c          503 g         1087 t
ORIGIN      
        1 ataattaata attattattt aaaaatatga agatattctt aatactagct gttttgatca
       61 taacattaac tttatcaaat gtatatggac aacaagatga taatgcaata aatgaaaatc
      121 cagctaaggg aaaaataaaa gtagttgctt cattttaccc tttttatgaa tttgttaaag
      181 agatagctgg aaccaatatt gtattaaaat cggtaatacc ttttggtttt gaacctcacg
      241 attgggaaat ttctccacaa aaaatatcag atctcatgga agctgatatg ataatataca
      301 gcggaatagg ttttgatgct tggcttggcg ataaacaatt tggtaactca acccttgttg
      361 atgtcagtaa agacttgaag cttataaggg gtcaagactt atcagaaaat tctcgaaatg
      421 atgaacgcaa atatggatat gattctcata tatggctgga tcctattttg gtaaaaaata
      481 tttccaaaac tattagcgat gcacttatca aaatagatcc aaataataca gatgcctatt
      541 tacaaaacac cgaaaatttt aatcaacaac ttgatatcct agattctttg ataaagacat
      601 cactgactca ttgtgaacta aaagacttta ttacttttca tcaagcattt caatattttg
      661 caaataggta tggtttgaat cagcatgctg ttcacgaagg ttctcaagaa ggtgaaattc
      721 ttccgcaaca aatcataaaa attatttcct tagcgaaaga tcttggtata gacacaattt
      781 attctgaaga actaaaggat cctagactat ctcaaaccct tgcttcagaa attccaaatg
      841 gaaaagtttt actattatct cctattgaag ggattgatca acaagagcaa aagaaggata
      901 taagttatat agagaagatg aaaatgaatt tggaaaatct aaaacaagga ttgaaatgta
      961 aatagtgtta tctttcaaat attttttaaa tcttggctta agttcttaag tgctaaaatg
     1021 acatgaagta tcgtcctttt tattgaagtt gggtaatctg tcttcatagt gtatgatgtg
     1081 tcggaaagct gtataataaa atacaataaa aactaagtaa aaaagattaa ttattattat
     1141 ttcgatctag gctagatcag atagaaaaca atacatgaaa aattctcttt cttggttgaa
     1201 atgacctatc ctcaacacaa caggaaaatt ttacttgcaa aagagcttat tttgaccaca
     1261 atgacaaacc ggatccgcaa tttaaattga tattaattaa aaatcatatg attataaaga
     1321 attttataaa tattgacttt gcaaaggcat ttgtctaaat ttatcaccaa attgacctat
     1381 aattatctat atttttgaat ccaatgtatt ttgaagagat gactgtatag caggtgaaga
     1441 aatctcattt tcgatctcac ggatctgatc tatctgataa agattttttg tctagtaaat
     1501 tatttttatt atattcatga tgaatatatt tttaaatcaa ctcaaaaagt aacaaatacc
     1561 aatttcataa aaaaaacgca taccaataat ataattttag tcatattgaa tgtacattgg
     1621 ttctatacgt tttaaataat gatagatttg gatataattg cacttgtaaa catattaatt
     1681 tttactaaaa aatgacaata ttatcaaaaa tatgaattta gagaatcttc agttagaaat
     1741 gagtatgagt actttgctta aatgatataa aacaaattta taggactgac aatttaatat
     1801 ctcgatatat aggaattctt ggataatgta tcttagattt tttcattatt taataatctt
     1861 tttagtagaa aaatctacct gactaataaa ttacaaaatt tataactaaa taattaatct
     1921 aggtaattct agattaaatg ttacttaggt ttgtacgcca atactaatat acatttaatc
     1981 cacatttgaa tttgaaatta ataatgaaca tcatgattaa tattatattt ttaaaattat
     2041 tttcattact ttccttttca ttcttgatat tattgtcaat gacttttcct attaagagtt
     2101 tttccttttc acaacaaaat tttgaacaac ttgctatcga tcagccagct atcgcacaat
     2161 taccttcccc agatggaaaa aataaaatag gttacataat attatcaaca aatgttatta
     2221 atgataatgg aggtaataaa caaccatcgg attttacaat aaacattcat gacacttcag
     2281 catttccttc ttcattgaaa gctgtaccat caccacaagt tcaaattatt tcagttaatg
     2341 aaggtaaata ctcaatttcg gtaaataatg taagtggata caatatatct cttgaaaacc
     2401 aatgcgaagg agtggtaaat tatggtgaag tgagatcttg tctgattatt gcagatgatg
     2461 ataatatttc ttcttcaaaa ttaccgatat taccgctatc gctgtctgac ttacttctcc
     2521 cagacaatag aggagaagaa aatgaggaca ttaaagctaa aattgctgca ataccaaagc
     2581 caacagatcc ctctaaagta ggatttcttt taatatcaac aaatgttatt aatgataatg
     2641 gaggtaataa acaaccatcc gattttacaa taaacattct tgggactccc gcctttcctt
     2701 cttcatttaa agctgcttca tcgaagatga ttcaagtagt ggctgtttcg gagggacaat
     2761 actctgtgtc agtcgataat agtgtcgcgg gatatcaaac attcctgcaa tttgaatgtc
     2821 aaggtcagat taatccaaac gagataaaga cttgtttaat tagattaaat gatatttcat
     2881 cgcctatacc atgtccacta ggacaacacc ttgagaacgg tcaatgtgtt cctgattcac
     2941 cacaatgtcc actaggacaa caccttgaga atggtcaatg tgttccaaat cctcccccta
     3001 caggggagac atttccagta caaaatatca tctggatgta tgattcaaaa caaacattga
     3061 gcaaagacat ctcactgcca tcaggagaga cacatccgac tgataaagtg ttattgtcta
     3121 gtggagccag tggtgtaaac gcacatccca ttaagaatgg ttggctagaa gtgcagtcag
     3181 gcggtggaaa tggtagagta tactggaatt atcatgaact accacaattt tcacaattag
     3241 acacagctgg tttcaataat gtaatgacag gaacatttaa gctaaaacct ggaatagaga
     3301 atttatcaat aaagg
//
LOCUS       DATIAS010000189         2517 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1259200, whole genome shotgun sequence.
ACCESSION   DATIAS010000189 DATIAS010000000
VERSION     DATIAS010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259200"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..1320
                     /locus_tag="VLA74_03715"
     CDS             61..1320
                     /locus_tag="VLA74_03715"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HSF49845.1"
                     /translation="MRDLYHRKDRLNYWINRVNNDLNESDRIDVLKLVEHMQERERAI
                     LWIIRCITALLSMRKQLKKPFREVTKSDIKELLLWMDEKGYKASTHEKYRQVLKLFYK
                     TVYGNNEYYPDCVKWFSVKVGKEKASKDPTMEISEYLDENEIQKLIEAAPTLQKKSFL
                     ACMYESGARPEEFLRLSNLDCKIDTHGAILILRGKTGERRVRIISFAKMLQQWLEIHP
                     LNQHQKQFPLWISDATNFKNQPLGLRGAQKIIEDAMLKAGLVNKHTRLYILRHSRASI
                     LATYFTESQLCTFFGWVQGSQVVKRYIHMSGKDLDNTLISISEGKQTIKQEEYLLKTK
                     KCNRCTETLSPSQQFCGRCGLSTTLIEQYTKELDLEKENKELKQQIQIVKNEMNDKFN
                     QIISMIQQNPLLAYVKPDVLSLKHIKE"
     gene            complement(1331..>2517)
                     /locus_tag="VLA74_03720"
     CDS             complement(1331..>2517)
                     /locus_tag="VLA74_03720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49846.1"
                     /translation="LLQQNNTMGYNELYRSVNLKFYVSEGSFDYHIKKLLSLNLIGKK
                     DSLVRGKPVLYFLTTAGKRQLQMKIVKIKYKNEQSDSILKDDERRRIMLYFVLFIMDT
                     WVKEYRFNKYEFDKFLSTLNLKEKDLEIKEKEFYQLPFRNKKTEFGKEKRTIYKTPNH
                     LLESVDDEYTDFFSITKLDYFSYTNKQIGPPDFGHIDEYQITYLLDEDSKPETVYECE
                     LPGVSKNDILYSDERPIFEHINFTLDEVEEIIDLAEKEGVIKALKIGSDIRYVLSDLN
                     LRRFFEDLRDFYELLDGYVWMIWLTRKPKKEEIKWMNLFGGDKKTDEIRKLTYIDRHN
                     RSKTILHNRKKLWVYNQELGIQKYYNKLLRKYKKVKKMELPLYELLEMVYPKVLRLPN
                     HQ"
BASE COUNT          952 a          360 c          355 g          850 t
ORIGIN      
        1 caaacaaaaa ccacaacatt taaaatttag gaatagcaat atggctacaa taaagacaca
       61 atgagagatc tgtatcatag aaaggatagg ttaaattatt ggataaatag agtaaataat
      121 gatttaaacg aatcagatag gattgatgtt ctaaaattag tagaacatat gcaggaaaga
      181 gaaagagcaa ttctatggat aattagatgc ataactgcac ttttatcaat gagaaaacaa
      241 ttaaaaaaac catttagaga agttacgaaa tctgatatta aagaattatt attatggatg
      301 gatgaaaaag gttacaaggc atctactcat gaaaaataca gacaagtctt aaagctattc
      361 tacaaaacag tttatggtaa taatgaatat tatccagatt gtgtgaaatg gttttcggtc
      421 aaggtaggaa aagaaaaagc tagtaaagat ccaactatgg aaatatcaga atatctagat
      481 gaaaatgaga tacaaaagtt aattgaagcg gcaccgactt tgcaaaaaaa gtcatttttg
      541 gcatgtatgt atgaatctgg agctagacca gaagaatttc ttagactttc aaatttagat
      601 tgcaagatag atactcatgg agcaatattg attttaagag gtaaaactgg agaaagaaga
      661 gtcagaatta tttcatttgc taaaatgtta caacaatggt tagaaataca tcccttaaat
      721 cagcatcaga aacaatttcc tttgtggata agcgatgcaa ctaattttaa gaatcaacca
      781 ttgggattaa gaggtgcaca aaagataatt gaagatgcta tgttaaaagc aggccttgtg
      841 aataaacata cacgacttta tattctgaga cattcacgtg cttctatact agcaacgtat
      901 tttactgaat cacaactttg cacttttttt ggatgggttc aaggaagtca agtagtaaaa
      961 cgatatattc acatgtctgg aaaagattta gataatactt taatatcaat cagcgaagga
     1021 aaacaaacta ttaaacaaga agaatattta ttgaagacca aaaagtgtaa tagatgtacg
     1081 gaaacgttaa gtccatcaca acaattctgt ggacgttgtg gtctttcaac aaccttgata
     1141 gaacaatata ctaaagaatt agatctggaa aaggaaaata aggaattaaa acaacaaata
     1201 caaatagtaa aaaatgaaat gaatgataaa ttcaatcaga taatttcaat gattcaacaa
     1261 aatccattat tagcatatgt aaaaccagat gttctatcgc ttaaacatat caaagaataa
     1321 tatcatctca tcattgatga ttaggcagac gcaaaacttt tggatatacc atttctaata
     1381 attcatagag cggcagttcc atttttttaa ccttcttata ctttcttaaa agtttattat
     1441 agtatttttg aattcctagt tcttgattat aaacccataa tttttttcga ttatggagta
     1501 ttgttttact acgattatgc ctatcaatat aagtaagttt tcgaatttca tctgtttttt
     1561 tgtctccacc aaaaagattc atccatttta tttcctcctt ttttggtttt ctagttaacc
     1621 aaatcatcca aacataccca tctaatagtt cataaaaatc tcgtaaatct tcaaaaaatc
     1681 ttcgtaaatt tagatcactc aaaacataac gaatatcact acctattttt aatgctttga
     1741 ttactccttc tttttctgcc aaatctataa tttcttctac ctcatctaat gtaaaattta
     1801 tatgttcaaa tattggtctt tcatcagaat ataatatatc atttttagaa acaccaggaa
     1861 gttcacactc gtaaacggtc tcaggtttag agtcttcatc aagcaaatat gtaatttggt
     1921 attcatcaat atgaccaaaa tctgggggtc cgatttgctt attggtataa gaaaaataat
     1981 cgagtttagt tattgaaaaa aaatctgtat actcatcatc tactgattct aaaagatggt
     2041 ttggtgtctt atatatagtt cttttttctt ttccaaattc tgttttttta tttcgaaaag
     2101 gtaattgata aaattccttc tctttaatct caagatcttt ttcttttaaa tttaaagttg
     2161 aaagaaattt atcaaattca tatttattaa atctatattc tttaacccaa gtatccataa
     2221 taaataatac aaaataaagc atgattcttc ttctttcatc atcttttaaa attgaatcag
     2281 attgttcatt tttatattta attttcacaa ttttcatttg taactggcgt ttacccgcag
     2341 tagtaagaaa atataacaca ggttttcctc taaccaaaga atctttctta ccaataagat
     2401 ttaatgataa taatttttta atgtgataat caaaagatcc ttcggataca tagaatttga
     2461 gattaacaga tctatacaat tcattataac ccatggtatt attttgttga agtaatt
//
LOCUS       DATIAS010000190         2145 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_578738, whole genome shotgun sequence.
ACCESSION   DATIAS010000190 DATIAS010000000
VERSION     DATIAS010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578738"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..808
                     /locus_tag="VLA74_03725"
     CDS             <1..808
                     /locus_tag="VLA74_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HSF49847.1"
                     /translation="LALEESIISFHDKDYVEFVKKVGKTGNGYLDRGDTPAFKGIFEA
                     SLYVVGSTLKAFDIVILKKNGIEHAFNPIGGLHHSRRTTAAGFCIFNDIGIAILEARK
                     KYGIKRIAYIDIDAHHGDGVYYEFENDPLLYIADIHEDGNFLYPGTGSEWETGSGSAV
                     DTKLNIPLNPYSTDQDFITSFKKVEDFIDNKAKPELIILQCGADSLKQDPLTHLNLTR
                     NSHNYAASKLHNLAHKHCNGRIVALGGGGYNKINIGDAWTAVVTAFIEKN"
     gene            complement(1030..1446)
                     /locus_tag="VLA74_03730"
     CDS             complement(1030..1446)
                     /locus_tag="VLA74_03730"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HSF49848.1"
                     /translation="MNKHENSITDPSIKSLFENKNFAFVATSMKDGSPHVTPTWVDIE
                     DSYILINTAIGRVKQKNVARDPRVSLSVADNNNPYHMVTVSGEIVEQITGEEAESHID
                     KLAKKYLNKDKYPGKAPGEKRILLKIKPKKVVHMKQ"
     gene            1721..1909
                     /locus_tag="VLA74_03735"
     CDS             1721..1909
                     /locus_tag="VLA74_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49849.1"
                     /translation="MKPNWVCSACGMWPNRKFSVKRHIINKHYGNAFLVTYIDYLVGR
                     QSGLYPPSSPLDYQKERK"
BASE COUNT          722 a          314 c          351 g          758 t
ORIGIN      
        1 attggctttg gaagaatcta tcatttcctt tcatgataaa gattatgtgg aatttgtcaa
       61 gaaggttgga aaaactggta atggatattt agatagagga gatacccctg cttttaaagg
      121 gatatttgaa gcatctttat atgttgtcgg gtcaacttta aaagcatttg atattgtaat
      181 tctaaaaaaa aatgggatag aacatgcatt taatcctatt ggtggactac atcattcaag
      241 aagaactact gcagcaggat tttgtatttt taatgacatt ggaattgcta tactagaagc
      301 tagaaaaaag tatggtatta agaggatagc ctacattgat atagatgcac accacgggga
      361 tggtgtctat tatgagtttg agaatgatcc tcttctatac attgcagaca tccatgaaga
      421 cggcaatttt ctctatcctg ggacaggatc agaatgggag actggttccg gctctgctgt
      481 ggatacgaaa ttaaatattc ccttaaatcc ttattcaaca gatcaagatt ttattacatc
      541 ttttaaaaaa gtagaagatt ttattgataa caaagcaaaa ccagagttaa ttatattaca
      601 atgtggtgca gattcgctga aacaagatcc attaacccat ttaaacttga cacgtaatag
      661 tcataactat gcagcaagta aattacacaa tcttgctcat aagcattgta atggaagaat
      721 agttgctctg ggcggaggag gttataataa aataaatatt ggtgatgcat ggaccgcagt
      781 agtaacagct tttattgaaa aaaattaggc taattaatta ccgtgcgcgt ataataataa
      841 agatagaaaa acaattcaag tctataaaaa tttgttttaa aataagtcta ccaattatac
      901 tattagcttt ttagaattta tattatagtt attattgttt tgatctatta tactaattga
      961 tggtatagga gaaattgatt atactttctc ctgattcaac caacttttaa tattctgatc
     1021 gtgcattttt tattgcttca tatgaactac ttttttaggt tttatcttta gtaaaattct
     1081 cttttccccc ggtgcttttc caggatattt atctttattc aaatattttt ttgccaattt
     1141 gtctatgtgg ctttcggctt cctctcctgt tatctgctca acaatttcac cactaacagt
     1201 aaccatatga taaggattgt tgttatccgc tacagatagc gagactctcg ggtctcttgc
     1261 tacattcttt tgttttaccc ttcctattgc agtattaata agaatgtaac tatcttcaat
     1321 gtctacccag gtaggggtaa catgaggaga tccatctttc atagatgtgg ctacaaaagc
     1381 aaagttcttg ttctcaaaaa ggctttttat tgaaggatcg gttatactat tttcatgttt
     1441 attcatatat aataatgatg aatattttta ataattgttt ttctctatga gcaatgctgc
     1501 cacaattttg ataatattgg tcacacctaa aatgagactt ctcactaata tttagtagtt
     1561 taataaaaat tagaatttat caaccccaat aaggtactgg tgacttgact ttcattttct
     1621 tagaacaaca acaattataa tcaatgcaat attgcgttaa atttaaaaaa taatagcagt
     1681 gttccacatt gtaatacagt ttaaaataaa agagttttaa atgaaaccca attgggtatg
     1741 ttctgcttgt ggtatgtggc caaatagaaa gtttagtgta aaacgccata taataaacaa
     1801 gcattatggg aatgcattct tggttaccta tattgactat ctagtaggga gacaatccgg
     1861 actctatcca ccttcatctc cgcttgatta tcaaaaagaa agaaagtagc ttcttagata
     1921 ttcaatgaag aattttggaa ggaaaaagca agaataacgg ctagagcaaa tagtaattta
     1981 taatttgata atttttatta atcctataaa aattattttt tagtatgtgt tataacaata
     2041 atttgaaata ctaatagata atctagtact tttcaacatt taatctataa atttaaatta
     2101 atttaaaatt tgtttaccga ttctgcgttc tgatatcgtc tgatg
//
LOCUS       DATIAS010000191         4113 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1259665, whole genome shotgun sequence.
ACCESSION   DATIAS010000191 DATIAS010000000
VERSION     DATIAS010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259665"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..581
                     /locus_tag="VLA74_03740"
     CDS             63..581
                     /locus_tag="VLA74_03740"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSF49850.1"
                     /translation="MDKPNSIEKKKIKDNRHPARMDDIFENFRRDIESAFLPRFPSLW
                     DWRFPSIGFPKYEELEVRMPLCDLIDKGDKYELTLETPGIDKEKIQINATKNSIRVSG
                     EQTEKTEEKRKNYLYNERSYKSFQRELPLPEEIIPKNIQAEMKNGVLHISIPKKVPTK
                     PEQTESVKIDVK"
     gene            874..1836
                     /locus_tag="VLA74_03745"
     CDS             874..1836
                     /locus_tag="VLA74_03745"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF49851.1"
                     /translation="MVNRGLLQYFGPSGEYIATAKGNLYLKKKSIHYDNFLLDAYDVS
                     REIISLKPNNTLLDARNFMIRYNISRIVVSKDQRPIGIITEKDISKYLYDSFTEKKLY
                     EIMVKEVMKKNLVTINQNSEIKNCTTLMLKNNISSLVLLDDEGIQKGIITKSDLVELY
                     AYHFMNKYISKDWMTKKVHTVDLYENIHIILLLMNIHKISRLIVVENNKPLGIVTIRD
                     LLPVSFMFRRDKSPSILSKKVSSKYLEQRYLPTRVTSMLVAKDVMIKEPITVSDKTDL
                     ADAAKIMTRNGISGLPVVNSNNKLVGIVTKTDIVKALDKILHVR"
     gene            1960..3324
                     /locus_tag="VLA74_03750"
     CDS             1960..3324
                     /locus_tag="VLA74_03750"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: protein motif:HMM:NF006696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HSF49852.1"
                     /translation="MTISSCDYENNMALATDFYELSMASAYFNSGMNDTIGQFEMYVR
                     KLPNNRNYLVVCGLEQIVSFLMNFKFTRTEIDFLKTHNLFKNDKNFLSYLAKLRFTGD
                     LWAVPEGTILFPNEPFLRIEAPIIQAQLFETYVLSMMNFQTLIASKASRIVNSAGDKT
                     VIEFGFRRAHSPYAALFASRASYIAGCKSTSNTLASFRYGIPAAGTMAHSYIMSFEEE
                     IEAFKKFVTIFPDSFLLIDTYDSINAIKQIIKEGVKCGGVRIDSGDLFYLCSKIRKIL
                     DKSGYKDTKIMASGDLNEYTIKKLVKKKIPIDSFGVGTELVTSRDDPALNGVYKLVAI
                     KKYSAQDKQKYEIIYKMKKSLDKISFPGPKQIFRINKNDKFYKDILALEYEKIAYGIP
                     LLKQFIKNGNIMINLPTILEIKKYYEYQMSILPRKFKRLDPELKTFPVYLSKELKNSI
                     ESFN"
     gene            3442..4008
                     /locus_tag="VLA74_03755"
     CDS             3442..4008
                     /locus_tag="VLA74_03755"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HSF49853.1"
                     /translation="MLDMLNDFVYGKLKFSKVQIIIPNIKLLLDFARQHNIPIVYCND
                     SHIRSDRELQIWGVHAMKDTKGSEVINELKPQYNDHIILKNSYSAFHRTNLAKVLDSL
                     YKGKGVESIIFTGIHTDICVKHSVYDAFLTGYDIIIAENGIAAPSFQKHKSGLDYMKS
                     NYLVQVKQIEKIIQDLRKGVKLKVVKIR"
BASE COUNT         1573 a          578 c          650 g         1312 t
ORIGIN      
        1 tttattgcat tgcaatacac tgaatgctta gtaattaaat aaattgacta cttctttcaa
       61 atatggataa accaaattca atagagaaaa agaaaataaa agataatcgt caccctgctc
      121 gaatggatga tatctttgaa aattttagaa gggatattga gagtgcattt ttaccacgat
      181 ttccctcact ttgggattgg agatttccct caattggatt tcctaaatat gaagaactgg
      241 aagtgagaat gcctttgtgt gatcttatag acaaaggaga taaatatgaa ctgacactgg
      301 aaacgccagg tatcgacaag gaaaaaatcc aaatcaatgc gacaaaaaat tctattagag
      361 tatctggaga gcaaactgaa aaaactgaag agaaaagaaa gaattatctc tataacgaaa
      421 gatcgtataa atcatttcaa agagaacttc cccttcctga agaaataata cctaaaaata
      481 tccaagctga aatgaaaaat ggggtcttac acatttctat tccaaaaaaa gtacctacca
      541 agccagaaca aacagaatca gtcaaaatag atgtaaaata aattttttac cattattttt
      601 ttatcgatgt ttaatttttc tcaggttata tgtaaagaat atctaatgaa tatattatat
      661 ttgtactgca atatcattga accatattct ttttataata aattttctaa caatatgcag
      721 tgatatgaaa taatcaagat accgataaat ttaggtggac aagaaagaat ttttattaaa
      781 atcttaggat tagctaccga acccttaaca aagaaaaaaa ttcaacaaga attaaatatt
      841 tctcatcaac aagttagaag atacactgca gaattggtaa atcgaggatt attacaatat
      901 tttggaccaa gcggggagta tatcgctaca gctaagggga atctttactt aaagaaaaaa
      961 tcaatccatt acgacaattt tctactagat gcttacgatg ttagcagaga aataatttcg
     1021 ttaaaaccaa ataatactct cttggatgca agaaatttta tgatcagata taacattagc
     1081 agaatagttg tgtctaaaga tcagaggcca attggtatta ttactgaaaa ggacatttcc
     1141 aagtatctgt atgactcttt taccgaaaaa aaactttacg aaattatggt aaaggaggta
     1201 atgaaaaaaa atctagttac cattaatcaa aattcagaaa taaaaaattg tacgacttta
     1261 atgttaaaaa ataatataag ctcattggta ctccttgatg acgaaggaat ccaaaaggga
     1321 ataattacca agagcgattt ggtagagttg tatgcatatc attttatgaa taaatatatt
     1381 tcaaaagatt ggatgacaaa aaaagttcac actgtcgatt tatacgaaaa tattcatata
     1441 atacttttat taatgaatat ccataaaata tctaggctta ttgtagtaga aaataataaa
     1501 ccgcttggta tagtaactat tcgcgaccta ttaccagtca gttttatgtt ccgacgtgac
     1561 aaatcacctt caatactttc taaaaaagta tcttcaaaat atcttgaaca gcgatatctt
     1621 ccgacaaggg tcacctcgat gttggtagca aaagatgtta tgataaaaga gcctataact
     1681 gtatcagaca aaaccgatct cgcggacgca gcaaaaataa tgacaagaaa tggaattagt
     1741 ggattaccgg ttgttaattc caacaataag cttgtcggaa tagttactaa aactgatata
     1801 gttaaagcat tagacaaaat tcttcatgtc cgatgaacat ctaattttat tttgaattta
     1861 ataaattttt cacatatatt tcgaattctt ttctataata tggtttagtt ttttatcaga
     1921 attttatgtt tattagtgga tttctattat agatatcccg tgaccatttc atcatgcgat
     1981 tacgaaaata atatggcttt agcaacggat ttttatgaat taagtatggc atcagcatat
     2041 ttcaattcag gtatgaatga tactattggg caatttgaaa tgtacgttag aaaacttcca
     2101 aataacagaa attatttggt agtatgcggt ttggaacaaa tagtatcttt cctcatgaat
     2161 ttcaaattta ctcgcacaga gattgatttt cttaaaacgc ataatttatt taaaaatgat
     2221 aagaacttct tgagttattt agcaaagctt agatttactg gagatttatg ggcggtacct
     2281 gaaggtacaa ttctctttcc aaacgaaccg tttttaagaa tagaggctcc tataattcag
     2341 gctcaattat ttgaaacata tgttctttct atgatgaatt ttcaaacatt aattgcttca
     2401 aaagcatcac gaatagtaaa ttcagctggc gataaaactg taatagaatt cggttttcga
     2461 agagcacata gtccttacgc agcattattt gcaagcagag ctagttatat cgcaggttgt
     2521 aaaagtacct caaatacgct tgcttcgttt cggtacggaa ttccagcagc cggtactatg
     2581 gcacattcat atataatgag ttttgaagag gaaatagagg cattcaaaaa gtttgtgact
     2641 atctttccgg atagttttct attaatagat acttatgatt cgataaacgc aataaaacaa
     2701 attatcaaag aaggagtaaa gtgtggtggt gtacgaattg atagtggaga tttattttat
     2761 ttgtgtagca agattaggaa aatactagac aaatctggtt ataaggatac aaaaataatg
     2821 gcgagtggag atcttaatga atatacaatc aaaaaattgg taaagaaaaa aattcctatt
     2881 gattcctttg gtgtaggtac tgaattggta acatctagag acgaccccgc cttgaacggt
     2941 gtttataaat tagttgctat taaaaaatac tcagctcagg ataaacaaaa atatgaaatt
     3001 atatataaga tgaaaaaatc gttagacaag atatcttttc cagggcccaa acaaattttt
     3061 agaattaata aaaacgacaa attttataaa gatattttag ctcttgaata tgaaaaaatt
     3121 gcttatggaa tacctctgtt gaaacaattt attaaaaatg gtaatataat gataaatctt
     3181 cctacaattc tagaaattaa gaaatattac gaatatcaga tgtctatatt acctagaaaa
     3241 tttaaaagac tcgatcctga attaaagacc tttccagtat acctaagtaa ggaattaaaa
     3301 aattcaattg aatctttcaa ctaacatctt ctttttctat tacgtttcct gtattggtta
     3361 tctatattaa ataatagatt aaaccatata aatagatcaa ctccagtaat atatcttgtt
     3421 ttgaaaagaa tagtaatctt ggtgctagat atgttaaatg attttgttta tggaaaacta
     3481 aaattttcta aagtacaaat aataatacct aatatcaaat tattgcttga ttttgcgagg
     3541 caacataata ttcctatagt gtattgcaat gattctcata ttcgatctga cagggaatta
     3601 caaatatggg gagttcatgc aatgaaagat acaaaaggat cggaagttat aaatgaatta
     3661 aaaccacaat ataatgacca tataattttg aaaaatagtt acagtgcatt tcatagaact
     3721 aatttggcaa aggtacttga ttcactttac aaaggaaaag gtgtggaatc aataatcttt
     3781 acaggcattc ataccgatat atgtgttaaa cattccgtgt atgacgcgtt cctcactgga
     3841 tatgatatta taatagcaga gaatggaatt gcggctcctt cttttcaaaa acacaagtct
     3901 ggtctagatt atatgaaaag caattatctg gttcaagtta aacaaataga aaagatcatt
     3961 caggatctga gaaagggcgt gaaactaaaa gtagtcaaaa tccggtaaaa taatattaat
     4021 attattcaat aatttgataa tcttacaact ttttatttat tattaataaa tatcaactaa
     4081 ccaaaatcga ttttagtgct atctccagta ata
//
LOCUS       DATIAS010000192         3729 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_714965, whole genome shotgun sequence.
ACCESSION   DATIAS010000192 DATIAS010000000
VERSION     DATIAS010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3729
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_714965"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..566
                     /locus_tag="VLA74_03760"
     CDS             159..566
                     /locus_tag="VLA74_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49854.1"
                     /translation="MTEPKKLEPTHNSSHPAEPNRKNDNFSTQNNYKNISYRNNNNSF
                     ANPKYFEPFQIFEKLLDIIKSIHNAKITNETPNDEQRENSILIFAKFRDAINRDYSDI
                     LGVKITLNFTSNKWNKLYSDKNQYLYTLTGFEQ"
     gene            594..2357
                     /locus_tag="VLA74_03765"
     CDS             594..2357
                     /locus_tag="VLA74_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49855.1"
                     /translation="MSNNVNNNSSQIPLIPSKILQNSGIIEKFVIDPNDKYVKLRLNS
                     KYNPIIPLDVSTEIIKEKDGWTKFTNKFRIGLKPYKIDKDHENWIISTITENGDLIRR
                     VARSVNNNNSTATTSSSQQQEQQQKQEESTIEISYTEWFIKLVEKYSDLQKEILNLIP
                     ELWEPVEFALSVRTILRIKNITLPFAGIILGSPSSLKTATIELFRNTRDNYYTDNFSA
                     KSFVSHNTSVPREKLAEIDLLPKIKDKLFLTPELSPTFSKKDEELNEILGIITRVLDG
                     HGYESDTGAQGHIGYNGKYVFVWIGAAVDIPRKVHKLLGNLGPKLYFFRIKSQKKDDE
                     FYLKQIQDEDTNGDYSKKIEKIRSKLNVYLEWFDLKSLDYDANITDNNNNATDEDVLL
                     CIIRLANLLAHLRGDVPVWETKDSQGSDYAYTFPTIEEPHRAITQLRNLARGHTLSQG
                     RNYITMNDIPLLIKVVLSTTSKERVILFDHLLENNGKLDTLSISEHMIVSPKTALKTM
                     TELVILGVVDRLDMENYSPNDSNNKAFQIQLKQEFNWFLSNEFKELRENFGKEYYNEY
                     RFSKQQQKTDEKEEEEDGEET"
     gene            2916..>3729
                     /locus_tag="VLA74_03770"
     CDS             2916..>3729
                     /locus_tag="VLA74_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49856.1"
                     /translation="MSHFNQDRLFPRKIQTGKSKGKQLEVFSKEEAIKLFEDSDFVDC
                     RINAFPSYTEYKGIQRYPPDFIFIDIDRKDFQDDKSFENALSKTKKNIKDKLNGYPTI
                     IWSGNGYHILQPIECPIILEQTKQFERYQNKFFNFSASQEFLRFAKDNLSNGKADKSN
                     YPSFKSCQIRVPGSINGKCLDDRDKRLSGNFKVKILQKWNGHRPIVTRELLEDFRTIL
                     EQKVTDQENSTNNYNYRYNNNNQNYYSNNNRIEWIEKILLQIPIEDGRKKIVG"
BASE COUNT         1499 a          536 c          584 g         1110 t
ORIGIN      
        1 gacatataaa ggaagtaacc cgtatatctg cacttgtccc tattgtagaa ccactgtaac
       61 agtaaataaa aaaaagattt ttttagaaaa aactattggt agtagtagta atgatacttc
      121 tacttctttt tttgacagag gagatgaaaa aatagaaaat gactgagccg aaaaaactcg
      181 agcccaccca caactcgagc catccagcag aaccgaacag aaagaacgat aatttttcta
      241 ctcagaataa ctataaaaat atatcttata gaaataacaa caactcattt gccaatccaa
      301 aatacttcga accatttcaa atatttgaaa aattgcttga tatcataaaa agtatacaca
      361 atgcaaaaat cacaaatgag acaccaaatg acgaacaaag agaaaatagt attttaatat
      421 ttgcaaagtt tagggatgca attaatcgag attattcgga tatacttgga gttaagatta
      481 cgttaaactt tactagtaac aaatggaata aactctacag tgataaaaac cagtatttgt
      541 acacattgac tggtttcgaa caatagtagt agtaggaggt tttaatttat tttatgtcta
      601 ataacgtgaa caataattct tctcaaattc ctttaatacc cagtaaaata ctccaaaatt
      661 caggaattat agaaaaattt gtaatagatc ctaacgataa atatgtcaaa ctaagactaa
      721 attctaaata taacccgata attccattag atgtttcaac tgagataatt aaagaaaaag
      781 acggatggac aaaatttacc aataaattca gaattgggct aaaaccctac aagattgata
      841 aggatcatga aaattggata atcagtacta taactgaaaa tggggatcta atccgtagag
      901 tagcaagatc agtaaataat aacaattcta ccgctactac tagtagtagt caacaacaag
      961 aacagcagca gaagcaagaa gaatcaacta tcgaaatatc ttatactgaa tggttcataa
     1021 aactagttga gaaatactct gatcttcaaa aagaaatatt aaatttaatt ccagaattat
     1081 gggaacctgt agaatttgcg ctttcagtaa gaaccatttt aaggattaag aatattactt
     1141 tgccatttgc aggaattatc ttgggttcac ctagttcttt aaagactgca acaattgaac
     1201 tattcagaaa tactagagat aattactata ctgataattt tagtgcaaaa tcatttgtat
     1261 cacataatac ctcagttcca agggaaaaac tagcagagat tgatctatta ccgaaaatta
     1321 aagataaatt atttctaaca ccggaactct ctcctacttt ctctaaaaaa gatgaagaac
     1381 ttaatgagat tcttggaatt attacaaggg tcttagatgg tcatggttat gaatcagata
     1441 caggagcaca gggacatata ggctataatg gaaaatatgt gtttgtatgg attggtgcag
     1501 cagttgatat tccaaggaaa gtacataaat tattaggaaa tctcggtcca aaattatatt
     1561 tctttaggat aaaaagccag aagaaagatg atgaattcta tttgaaacaa atacaggatg
     1621 aagacactaa tggcgattac agtaagaaaa ttgaaaaaat aaggtccaaa cttaatgtat
     1681 atctggaatg gtttgactta aaatctcttg attatgatgc aaatattact gataataata
     1741 ataatgctac cgatgaagat gttttattat gtataatcag gcttgctaac cttcttgccc
     1801 atttaagagg tgatgttcca gtttgggaaa caaaagatag tcagggatcc gattatgctt
     1861 atacctttcc aacaattgaa gaacctcata gagcaataac acaattgaga aatcttgcga
     1921 gagggcatac cctatctcaa ggaagaaatt acattacaat gaatgatatt cctttattaa
     1981 tcaaagttgt actttctaca acgtctaagg aaagagtaat cttatttgat catttactgg
     2041 aaaataatgg aaaattagat acattaagta tttctgaaca tatgatagta tctccaaaaa
     2101 ccgcattaaa aacaatgact gaattagtta ttctaggagt tgtagaccgg ttagatatgg
     2161 agaactatag tccaaatgat agtaacaata aggcatttca gatacaacta aaacaggaat
     2221 tcaattggtt tctttcgaat gaatttaaag agttacgtga aaatttcggt aaggaatatt
     2281 acaatgagta tcgcttttct aaacaacaac agaaaaccga tgaaaaagag gaggaggagg
     2341 atggggaaga gacatgacct ccttccgaag aagacaacac cagaaaaaca tcgttaccaa
     2401 aatttacccc ctagcactct atttttttta ttattttttt attaatagta tttttatttt
     2461 taaattaaaa aaattaatat tttttctacc gctagggggt attttttggt aacgccacta
     2521 tacctatctc atatatgggg gttagataat ttataacatt acaacaacaa caatcaataa
     2581 aacctcataa aggatttaca ctagaatatc tagaatacaa tcaaagagaa aagattctga
     2641 aacatctaaa agtaggaaag acacttaagt gtcatcataa aaattgtgat cgttttaaca
     2701 ccgatttttc aaccttatat gagtataata ttcattgtca tactagtcat aaaggaaaac
     2761 cattacatcc agaaatttcc ttaatagaat tattaggttt agaacctaga gggaatccat
     2821 gggaatccaa tttatgttct gtttcttttg ttaaaagtaa taatatcaac aagtctaaaa
     2881 gttatcaaga aatagaaaaa ggactagatt ttttattgtc tcatttcaac caagatagat
     2941 tatttccaag aaagatacaa actggtaaat cgaaaggaaa acaactagaa gtattttcaa
     3001 aagaagaagc aataaaattg tttgaagatt ctgactttgt agattgtagg attaatgctt
     3061 ttccttccta tactgaatat aaaggaatac aaagatatcc tcctgatttt atctttattg
     3121 atatagatag gaaagacttt caagatgata aaagttttga aaatgcttta tcaaaaacaa
     3181 agaaaaatat caaagataaa ttaaatgggt atcctacaat catttggtct ggaaatggct
     3241 atcacatttt acaaccaata gaatgtccga ttattttaga acaaactaaa caatttgaga
     3301 gatatcaaaa caaatttttc aatttttctg catcacaaga atttcttaga tttgcaaaag
     3361 ataacttatc gaatggtaaa gcagataaaa gtaattatcc atcatttaaa tcctgccaga
     3421 ttcgagttcc tggatcaatc aatggcaaat gtcttgatga tagagataaa agattgtcag
     3481 gtaatttcaa agtaaagata ctacagaaat ggaatggaca tagacccatt gtaacaagag
     3541 aattattaga agattttaga acgattttag aacaaaaggt aacggatcaa gaaaattcta
     3601 ctaataacta caattacaga tataataaca acaatcaaaa ttattatagc aataataatc
     3661 gtattgaatg gattgaaaaa atcttgttac aaatcccaat tgaagatggc agaaagaaaa
     3721 tagtaggtt
//
LOCUS       DATIAS010000193         3206 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_579192, whole genome shotgun sequence.
ACCESSION   DATIAS010000193 DATIAS010000000
VERSION     DATIAS010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579192"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VLA74_03775"
     CDS             complement(<1..456)
                     /locus_tag="VLA74_03775"
                     /inference="COORDINATES: protein motif:HMM:NF039195.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PsbP-related protein"
                     /protein_id="HSF49857.1"
                     /translation="MNLIKLLVATVVIATTLSIFTSNIHAQWTIPSSSDISNSQQQQQ
                     TNFVTYENSDSGIKIDYPADWNKVENSVTDIEFHPPPEAATTEVKATDTSPPATTAQS
                     DVSIKLTVTPLQSNTVTMNSIVDETLKDKSKNLENFLLLESAIVQNPKAK"
     gene            complement(2457..>3206)
                     /locus_tag="VLA74_03780"
     CDS             complement(2457..>3206)
                     /locus_tag="VLA74_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49858.1"
                     /translation="GAVVTDPQLCNAATPAELCPDDTDLAGVWVTDADTDCDVEGVTT
                     FTCPDDSQIPGAIVTDPLLCDLVTEDFKGCNTCVLFGVGGVDGTNAFNLIGGINDFTL
                     NGQVGAEALCELEGDELIEEYTDIVEATVSGDANQEQSIELFTDCIDNLEANNLAGFS
                     INSNGLSINSNGQIQQTNNTQSNEQVKTLNQNAEQNKNVETTSNAQIQQQTSNTQLNE
                     QLKTLNQNVEQNKNVEQKKNPSLPLFKFNHQ"
BASE COUNT          964 a          467 c          528 g         1247 t
ORIGIN      
        1 tttggcttta ggattttgaa caatggcaga ctctagtaat aggaaatttt caaggttttt
       61 gcttttatct tttaaggttt catctacaat ggaattcatt gtaacagtat ttgactgaag
      121 aggtgttaca gtcagtttta tggatacatc ggattgagct gttgttgccg gtggtgatgt
      181 gtctgttgct ttcacctctg ttgttgctgc ttcgggtggg ggatggaact ctatatctgt
      241 gaccgaattt tcaactttgt tccaatctgc tggatagtct atcttgatac ctgaatcgct
      301 attttcatat gtcacgaaat ttgtttgttg ttgttgttgt gaatttgata tatcagatga
      361 tgacggtatt gtccattggg cgtgtatatt agatgtaaat atagaaagtg tagtagcgat
      421 aactactgtt gctactaaaa gttttataag attcacggaa ccgatttcat acttgtctct
      481 ttaaacttta agggttttta gaaaataacc attctgttaa aagaacttta ctttaaaaaa
      541 ggattctttt tttataaaaa aacaaagacg aggttacgat gtaaaaacta taatttttgt
      601 agctttatta ggctaaaccc atatattttg agtttttcat ttatatcata tcagaatcaa
      661 aagtctttat taattcgtta aataaataga tgggtcttgg tttgttcttg atattttata
      721 tataaattta atgggttaat tgtatttgga attcatatta tttgattcgg attttaggta
      781 tcagaagaaa gcaatcaatc agtttgatag tattataagt ttaaactatc tgagacaggg
      841 tcataataaa tcaataaacg aaccaatttc atgatgccaa caatagaata ttactaatcc
      901 taatactagt actactaaag aaatcttata ttattagata gtttgttggc ttgatgataa
      961 tagttttttt tcatcaaata ttcatttcca atagactcta tatcttattc gttatgaaaa
     1021 tgaaataatg gaataataaa atgactgcgc ctcaattatt gattacattt tatattttgt
     1081 actactgagc tctaatatag actagactag tcttacaatt gtttcaatgt gatagtgaca
     1141 gtcttgacag tagtgatagt cttgatagac acatgatata atagtgattg acagcaagag
     1201 agataataat agtgactgat tgagggttga tagtctacaa caattaatag caattgtata
     1261 aacagtaata acgtttgtga ctgttgttat aacgtaaagt gatagagatt gctgtctgct
     1321 gatcaggtta ggttagtgag agacgtaaaa gtgccgctaa agcgtagtga taattgtcat
     1381 gtctataatt ttatctactt ttcataaaga tttttattaa gatataaaga attttatatc
     1441 aacaaaaacg cttccgacac aatgtacaaa taatttttct ttgaaatgat gtgttaaatg
     1501 atctaggggg tagtgatttt ggctattgtg ttatttgtac tactagacta tattttttag
     1561 ttataatatt tatatattta taaatgaata attctagcca atactaattt ttttgataaa
     1621 tttttattac taaatataaa aaatatatta aaagtattaa taattctaaa ataactcata
     1681 tatctttatt ctatttttta gttattttac aaacatcaac ctctacctac ctctacattc
     1741 ctatatagct attttttctc tttgttgcat aaattttcga ctacattcag attcaatatc
     1801 cataatagag gcgaagaaac ctctatacat caccaatctt cattttcaag cctaatagtc
     1861 agtcagattt ctcactcctt ctcctcctaa tgtgttcttc tgtcgtaaaa agacgttgac
     1921 tagcaattta tttatttatt ttaaatttca ttaaattggt cttgaatctt ggaattttgt
     1981 cgtatatcga cgttaggaac cattcatcca ttttgcctca aatttcgcag atagattaga
     2041 ttataacagc gtattacttc actgacgtat cgacgttata gttagcaatt caattgtttc
     2101 gagcctaact ttgttagttt attatatttt aaatagttat tgttaaaggg atgcattttt
     2161 gaattttcta ctatttattg cctgggctgt gaaaatattt gaaaaagaaa atactctata
     2221 tatattttat atcagcataa gtttggttat tgaattatta tggtcgtctc aattatctat
     2281 atcagtcgat aaaaatcttt tctaactttg cgattattct gctaaaaaaa gtgtttttac
     2341 atgcaagata aaaaatgtct tttgtactct ctctaaacta acggctgaaa atcaatatat
     2401 taattttaat taaaagaaaa tattataact ttaaaaaaaa tgagggttgg aaaaaattat
     2461 tggtggttga atttgaacaa aggaagtgat gggttcttct tttgttctac atttttgttt
     2521 tgttcgacgt tttgattgag tgttttcagc tgttcattta actgtgtgtt gctggtttgt
     2581 tgttgaattt gggcattgct ggttgtttct acgtttttgt tttgttcagc gttttgattg
     2641 agtgttttca cttgttcatt cgactgtgtg ttgttggttt gttgaatttg gccattgctg
     2701 tttattgaga ggccattgct gtttattgag aatcctgcta ggttatttgc ttccaaatta
     2761 tctatacaat ctgtgaataa ttctattgat tgctcttggt ttgcatctcc actcactgtc
     2821 gcttctacta tatcagtgta ttcttctatc agctcatctc cttctaattc acataatgcc
     2881 tcagcaccta cttgtccatt tagagtaaag tcgtttattc cgccaatcaa gttaaatgca
     2941 tttgttccgt ctactcctcc tacaccaaag agtacacatg tgttacatcc cttgaaatct
     3001 tctgtaacta ggtcacatag caaaggatca gtgacaattg cacctggtat ctgtgaatca
     3061 tctggacatg taaaggtcgt tactccttct acatcacaat cagtatctgc gtctgttacc
     3121 catacacctg ccaagtcagt atcatctgga cataactctg ctggggtagc tgcgttacac
     3181 aattgtgggt ctgttactac agcacc
//
LOCUS       DATIAS010000194         4814 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_852277, whole genome shotgun sequence.
ACCESSION   DATIAS010000194 DATIAS010000000
VERSION     DATIAS010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852277"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            641..2116
                     /locus_tag="VLA74_03785"
     CDS             641..2116
                     /locus_tag="VLA74_03785"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSF49859.1"
                     /translation="MVSNHINTSNNRTEFKCSLCGKSLINRDPSEIIQESISGSKYFF
                     DTNQCVTMFKRLDHFYGKNITSFTGNTEIISDPFWNKIVPSYDEIREIDIESKDHYIH
                     VIKNPQEALATAIQLFRSAEKEILLLFSSANAFYRRINQADGFMLIKKIKDDPSKNVN
                     IRILTPFDEKIQTTVDNLKNDYSIDVEYLPEPLHLNITILITDRRFSLAVELQKEKDS
                     AEDSIDAMGLSTYSNSKSTVLYYVSIFENLWKQADIYKKADDLYRQLKETNQTQRQFI
                     NEAAHEIRNPIQPILGLAEVMLSNKNLDPDKKEDLLRIIVSNAKKLQFLTDNLLDVAR
                     IDGQLLTLNLEEFDLMESIRDLLRDLENQTKGKNISLVLNNKEKSVKLVADKLRVNQV
                     FLNIINNAIDILQEGQVIVSVESQNNDVLVKITDNGPGIQSKIKDKLFTKFVTGSKSG
                     TGLGLYICKNIIEKHGGKIWAENNQDKGATFSFTLPIKTEK"
     gene            2287..2655
                     /locus_tag="VLA74_03790"
     CDS             2287..2655
                     /locus_tag="VLA74_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49860.1"
                     /translation="MEKKKILIVDDDQGTTLSFKLGLENSGYSVDTFNDPEIALNNFK
                     PAIYDLSLIDIRMQGMNGFELVQELKKIDTNLRVCFITSFKAYYEGLLEEYPNMDHKC
                     FIQKPISIDELLKHIEKVLV"
     gene            2728..3594
                     /locus_tag="VLA74_03795"
     CDS             2728..3594
                     /locus_tag="VLA74_03795"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MinD/ParA family protein"
                     /protein_id="HSF49861.1"
                     /translation="MTRCIAFHSYKGGTGKTTIATNLSVLLAKKGYRVFLLDLDVYAP
                     SLGSYFDLKDPKKWINDFLFGNASVDEICVDITKTISSDIKGKLTVSMANSNKEEIYK
                     LDGNISKQGSQMQFLRNFILLREELIMKKNADFIIIDTSPGVRYWSINALAVSDVVLL
                     TLKMGDLDVDGTKRMASEIYGSFTKFGTMCYLLLNRGSGYCTIPPEQHHPLIALGNKG
                     KDGSSFSSQQTQQSTLQKLSRDIDLDIISEIPCYCDIQFSQKEFLTSLLYPEHPFASK
                     IYGLIEKLETNN"
     gene            3671..4534
                     /locus_tag="VLA74_03800"
     CDS             3671..4534
                     /locus_tag="VLA74_03800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSF49862.1"
                     /translation="MQKIHSTSNSVIGVLENVDISKIKPFKYYYRNNLHEDMHELCYS
                     IKEKGLLQPIIVRMTDDSKYEIVAGTRRYNACKMLGWRKILCHVVELDDKDAFEVSLM
                     ENIHSKNLNPIDEARAFKDYVSTYGWGGISELATKLGKSASYIDKRIRMLTFPENIIQ
                     SISNNEIKPSLAEELLPIKEKEHQSKLAELIKKRKLSSRQVRMLKDEMKNSEHPEEIF
                     DFTTKIVDIDARTQKSFDKAIIAVRVAMNKLASIIEDVEDNWTVYEILMQHKNMLHSQ
                     IDILLKEKKKI"
BASE COUNT         1802 a          699 c          792 g         1521 t
ORIGIN      
        1 aaatcttatg gcgagggaat aatacgattg aataaattac atgaagatat catcgatcca
       61 attttaagga tacatattga tgaagaacaa gacagaaata ttctagaatg tgactgcctt
      121 aataaaggat tattatgtta tggaattgtt tgttctaaga agctatgaga aacgtcattg
      181 atttatgtta acaggatctt ttttattaat tgctgtttcg tatgataata gctatatgta
      241 agaaaaatat acaataatat tattatctac gatcataaaa taagacatat gataaattga
      301 attttaatca taatatgaat aaaaatttgt actagccttt ataagtgttg aaacctataa
      361 tatattatcc tgaaattaaa atgtagttta tgtggttgta caatagaaaa tactgaaacc
      421 cttataaaaa ccttcagatc gataggcgat actagatacg agtttctttt tgataaaaaa
      481 aattgtaaaa ttctctttga aaggttttca ggaatttatg gaaatgagtt ctgcatggat
      541 ctggtagcct cttcccatta ggaatattaa attttctcta tattcaaata gtttaaaaaa
      601 cacagaaatt atatatattt aatcttgtat cacgtggaaa atggtgagta atcatataaa
      661 tacttcaaat aataggactg agttcaaatg ttccctatgt ggcaagtctc taataaatag
      721 agatcctagc gaaattattc aagaatctat ttctgggtca aagtactttt ttgatacaaa
      781 tcaatgtgta accatgttca aaagacttga ccatttttat ggaaaaaata ttactagttt
      841 tacaggaaat acagaaatta tttcagatcc tttttggaac aaaattgtac catcctacga
      901 tgaaataaga gaaatagata ttgaatcaaa agatcattat attcatgtaa tcaaaaatcc
      961 ccaagaggca ctagcaacgg ctattcaact ctttcgatcc gcagaaaaag aaattctatt
     1021 actcttctct tctgcaaatg ccttttacag gcgaataaat caagcagacg gatttatgct
     1081 tataaaaaag ataaaagatg atccatcaaa aaatgttaat attagaatcc taactccctt
     1141 cgatgaaaag atacaaacaa ccgttgataa tctgaaaaat gattattcaa tagacgtaga
     1201 gtatctacca gaaccattgc atctcaacat cactattttg ataactgata gaagattctc
     1261 tcttgcggtt gaattacaaa aagaaaaaga ttcagcggaa gattctattg atgcgatggg
     1321 attatctaca tattcaaata gcaaatcaac agtattatat tatgtatcta tattcgagaa
     1381 tttgtggaaa caggcggata tctataaaaa agcagatgac ctctaccgac aattaaaaga
     1441 gacaaatcag acacaaagac aatttattaa tgaagcagca catgagatac gaaatccaat
     1501 tcagcctatt ttaggtcttg ccgaagtaat gctttctaac aagaatcttg atcctgataa
     1561 gaaggaggat ctacttagga taattgtcag caatgctaaa aaacttcagt ttcttacgga
     1621 taatctttta gatgtcgctc gtatcgatgg tcagctttta actcttaatc ttgaagaatt
     1681 tgatttaatg gaatctataa gagatctatt aagggactta gaaaatcaaa ccaaggggaa
     1741 aaatatcagt ttagttttaa ataataaaga aaaatcagtt aaactagttg cggacaaatt
     1801 acgtgtaaac caagtttttt taaatattat caataatgct atagatattt tacaagaagg
     1861 tcaagtaatt gtatcggtag aaagtcaaaa taacgatgtc cttgtaaaga tcacagataa
     1921 cggtcctggt attcaatcaa agataaaaga taagctattt acaaagtttg taacgggttc
     1981 aaaatcagga acagggctgg gactatatat ttgcaaaaat ataatagaaa aacatggcgg
     2041 aaagatatgg gcagaaaata atcaagacaa aggtgcaaca tttagtttta ctttacctat
     2101 aaaaacagaa aaatagtttt tttaatcatc tttctacgtt tcctgcaatt tccagtttct
     2161 tttttccatc atcagtcagc cagccagttt ccaattcgtt tgaaacttcc tagttacaat
     2221 tctatatttt tgtagtaaat atttttatat ataatcatta ttaaattttg taaacgagtt
     2281 ttaattatgg aaaaaaagaa gatccttatt gttgacgatg atcaaggtac tactttatcc
     2341 ttcaagttag gattagaaaa cagtggttat agcgtagata cctttaatga tcctgaaatt
     2401 gctttgaata attttaaacc tgcaatttac gatttatctc ttatagatat cagaatgcaa
     2461 ggaatgaatg gatttgaact agttcaggaa ttaaaaaaaa tagataccaa tctgagagtc
     2521 tgtttcataa cttcatttaa ggcatattat gaagggctat tagaggaata cccaaatatg
     2581 gatcataagt gctttataca aaagcctatc tcaatcgatg agctcttgaa acatatcgaa
     2641 aaagtactag tatgaaaaaa caaagatata caccgaatat atctatcaca agtttattag
     2701 tgagtttatg acaccttttt ttgtaaaatg actagatgta ttgcttttca ctcttacaaa
     2761 ggtggaacag gcaagacaac aatagcaacc aatctcagtg tactattggc aaagaaagga
     2821 tatagggtat ttcttttaga tctagatgtt tatgctccaa gtttgggttc ctattttgac
     2881 ttgaaagatc caaaaaaatg gataaatgat tttcttttcg gtaatgcctc agttgatgag
     2941 atttgtgttg atattactaa aacaatttca tctgatataa aaggcaagtt aactgtaagt
     3001 atggcaaatt ccaataagga agaaatttac aaactggacg gaaacatatc taaacaaggt
     3061 tctcaaatgc aattccttag aaactttata ctactaagag aagaactgat aatgaaaaaa
     3121 aatgctgatt ttatcatcat agacacaagt ccaggcgtga gatattggtc aatcaacgct
     3181 cttgctgttt cagacgtcgt tcttttaaca ttgaaaatgg gtgaccttga tgttgatggt
     3241 accaaaagaa tggccagcga gatttatggc tcattcacta aatttggaac aatgtgctat
     3301 cttttactaa atagaggttc aggttactgt accattcctc cagagcagca tcatccgttg
     3361 atagcattag gtaataaagg aaaagatgga tcctcttttt cttctcaaca aactcaacaa
     3421 agtacattgc aaaaattatc ccgtgacata gatctggata ttatttcaga aataccatgt
     3481 tattgtgata tccagtttag tcaaaaagaa tttcttacca gtttgctata tcctgaacat
     3541 ccattcgcaa gcaagattta cggactcata gaaaaattag aaacaaataa ctagaaaata
     3601 aaaagtaatt ctttttatag ttcttataca ggtgcaacaa ggttatatag tctgtaaccg
     3661 aatatttcac atgcaaaaaa tccattccac ttcaaacagt gtaattggag tcctagagaa
     3721 tgtagatatc tcaaagatta aaccattcaa gtactattac agaaataatc tgcatgagga
     3781 tatgcatgaa ttatgttatt ctataaagga aaaaggtctt cttcagccta taattgtaag
     3841 gatgactgat gattcaaaat acgaaattgt tgcaggtacg agaagataca atgcttgtaa
     3901 aatgcttgga tggcgtaaaa ttctctgtca tgtggtagag cttgatgaca aagatgcttt
     3961 cgaagtatcc ctgatggaaa atattcactc taaaaatcta aatccaatag atgaagcacg
     4021 tgcattcaaa gattatgtat ctacctacgg ttggggtgga atatctgaac ttgctacaaa
     4081 actgggtaag agtgcaagtt atattgataa acgtataagg atgttgactt ttccggaaaa
     4141 cataattcag tcaatctcaa ataacgagat aaaaccaagt cttgcagagg aattgcttcc
     4201 tataaaagag aaagaacatc aatccaaatt ggctgaattg attaaaaaga gaaagctttc
     4261 ttcaagacag gtacgcatgt taaaagatga gatgaaaaac tccgaacatc ctgaagaaat
     4321 ctttgacttt acaacgaaga tagttgatat cgacgcaagg actcagaaat cttttgacaa
     4381 ggctatcatc gcagtgagag tagccatgaa taaactggcc tccataattg aagacgttga
     4441 ggataactgg accgtgtacg agatattgat gcagcacaaa aacatgcttc atagtcagat
     4501 agatatactg ctaaaagaga aaaagaaaat ctagataatt ttttttcagt ttccattatt
     4561 tcaatatcat tatttttcct tttcgttttt tgtatatttt ttctatcatt ttacttctga
     4621 atttgtaatt ttttcaaaag gcacaaattt ttcggcgccg aaaaattttt tatataaatt
     4681 tgttgctccg aataaaaaaa tgatagaaat agttatgata atgatgtagt aagtaaatac
     4741 tcaatatatt attacaaatt ttcattggaa gtttttggta gaaaaataaa tacagaaaat
     4801 gagaaataaa tgaa
//
LOCUS       DATIAS010000195         2116 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_988540, whole genome shotgun sequence.
ACCESSION   DATIAS010000195 DATIAS010000000
VERSION     DATIAS010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_988540"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            325..444
                     /locus_tag="VLA74_03805"
     CDS             325..444
                     /locus_tag="VLA74_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSF49863.1"
                     /translation="MSEMTKDEIRHFLLQETFTGKLGTINKNGTPHVVPIWYT"
     gene            1061..>2116
                     /locus_tag="VLA74_03810"
     CDS             1061..>2116
                     /locus_tag="VLA74_03810"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HSF49864.1"
                     /translation="MLQVIGYAAREAKALLTPFSFERRDLLDHDVVIDIQYCGICHTD
                     IHQVKNEWGRSTYPMVPGHEIVGNVSQVGSQVTRFKVGDKVGVGCFVDSCRKCDACSQ
                     GLEQYCSNVLTTYNGIEKDGKTPTQGGYSNKIIVDENYILRMPDNLVSERAAPLLCAG
                     ITLYSPLMKWKAGHGKKVAIIGLGGLGHIGVKIAHALGAEVTVLSHSLKKQEDAKKMG
                     ADNFYATSDPKTFEKLEGYFDIMINTVSTDLNLNQYLNLLRLDGTMVVVGVPEKDTQI
                     NAYSLISARRNLAGSLIGGISETQEMLDFCSKHNIVCDIELIPIQKVNEAYERILNSD
                     VRYRFVIDLNSLKKINYE"
BASE COUNT          775 a          281 c          382 g          678 t
ORIGIN      
        1 ccatgtaaat actagaatta accatatctt gtgatccaat taaatataaa aatagataat
       61 atatgggatt ctgtaaactt atcggttgat tcgtctattt gtaaatagta gatatatttc
      121 actattagtt ctcatactaa aatagtatat taaaataaat ttgaaaaatg aattgtcatt
      181 aaaattagta gatgaattta tcacgagtat tgtggaggag tgtcaactga ttttgacacg
      241 attttgtagt tcaaagttag tattttaaaa aagatagata aatctggtat aatttataat
      301 aattttatct gactaataat actaatgtca gaaatgacta aagatgaaat ccgacatttt
      361 cttttacaag aaacttttac aggaaaactt ggaacaatca acaagaatgg aacaccacat
      421 gtagttccta tttggtatac ctaagacgaa gaagataata ttatttttaa tacaggtggc
      481 aaatcagtaa aagcaaaaaa tattcgacgt gacaatcgag tccgtttatg tgtagacgat
      541 caactatctc tttatacatt tgttattgtt gatggtattg cagaaataat tagtgttgag
      601 ccaaacgaac ttttcaaatg ggctaaaata atagcagcaa gatatatggg caatgaaaaa
      661 gcagaagagt atggcaagcg gaatagttca gaaggtgaat tattgataaa aataaaacca
      721 accaaagtta ttggtcaaaa agatatagca gaatggtaat taatcaattc aaaatttctt
      781 aaattaagta attagttaaa aaggttaaaa aaataatata tcattagtca aaaaaaaggg
      841 ttctgaggac ttatagcatg agatgtagtt gggatctatt taaacaaatt aagtttttct
      901 atcgttaatc gtaataatta aaaattattt cttataaaag ggtaacataa tattattata
      961 tgcaaaatag tattatatca ttctatgaaa gcctatctat tgaatatatt ttaaaataag
     1021 ttaaattcat aactacctgt gaactatttt tagagaatct atgcttcaag ttataggata
     1081 cgcagcaagg gaagccaaag ctttactaac acctttttct tttgaaagaa gggatctcct
     1141 tgatcatgat gtagtgattg atattcaata ttgtgggatt tgtcataccg atatccatca
     1201 agtaaaaaat gaatggggaa gatcaaccta ccccatggtt ccgggtcacg aaattgtagg
     1261 aaatgtttca caggtaggct cacaagttac gcgattcaag gttggtgata aagtaggtgt
     1321 aggttgtttt gttgattctt gccgcaaatg tgatgcttgc agtcaaggac ttgaacagta
     1381 ttgtagtaat gtacttacaa cttataatgg aatagaaaaa gatggcaaaa ctcctactca
     1441 aggaggctat tctaataaaa ttatagtaga tgaaaactat atccttcgta tgcctgataa
     1501 ccttgtttca gaacgtgcag ctcctcttct ttgtgctggt ataacccttt attctcccct
     1561 tatgaagtgg aaggcaggtc atggaaaaaa agttgccata ataggtcttg gtggcttggg
     1621 acatataggt gtaaaaattg cacatgcgct tggagcagaa gtaactgtgt taagtcattc
     1681 acttaaaaaa caggaagatg caaagaaaat gggagctgat aacttttatg caacatctga
     1741 tcccaaaact tttgaaaaac ttgaagggta ttttgatatt atgatcaaca cagtttcaac
     1801 tgatcttaac ttgaaccaat atttgaatct gcttagactt gatggaacaa tggtagtagt
     1861 tggagttcca gaaaaagata ctcagatcaa tgcatattct ttgataagtg ctcgccgtaa
     1921 tcttgctggt tctttaattg gcggaattag tgagactcaa gaaatgctag atttttgcag
     1981 taaacacaac attgtatgtg atattgaact cattccaatt caaaaggtaa atgaagctta
     2041 tgaacgtata ttaaatagcg acgtacgata ccgttttgta attgatttaa attcgcttaa
     2101 gaaaattaac tatgaa
//
LOCUS       DATIAS010000196         2882 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1260855, whole genome shotgun sequence.
ACCESSION   DATIAS010000196 DATIAS010000000
VERSION     DATIAS010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260855"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            232..1536
                     /gene="asnS"
                     /locus_tag="VLA74_03815"
     CDS             232..1536
                     /gene="asnS"
                     /locus_tag="VLA74_03815"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HSF49865.1"
                     /translation="MYLRTSDVKSDYYLGKEVSLRGWIHRIRKQKENSFLLLRDDRGG
                     VIQSIFPSSKTNNLTIESSIEIKGIVQKDTRAPEGGYEIKGTTIYVYSLSKPDYPLGE
                     YTSPDLLLEYRHLTNRTRKMIMMSKVRSSILRYARDWFIHNDWYEVSAPVLVKGSVEG
                     GSTLFKLKYFDDYAFLSQSAQLYLESMIFSLGPVWSLTPSFRAERSRTVRHLAEFLHL
                     EAEAPWVTLEDLMKIQEKLVLFIIKNTIKERSHEFDFLKRDISSLEQISIPFKKITYE
                     KAIQSLQKKDYHIVDNDVSRMIEFGDDLNIESERIITEDSITPIFITHYPLKIKPFYV
                     KEDPTTADVGLAVDLLAPYGFGEISSGGIREDNLEKLIRQIHSEGLDSTDYEWYLDLR
                     RYGSIPHGGFGIGIERLIRWILNIQDIKDTVPFPRTMSRISP"
     gene            1626..2432
                     /locus_tag="VLA74_03820"
     CDS             1626..2432
                     /locus_tag="VLA74_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HSF49866.1"
                     /translation="MGDNFPENTESLFFELAGDLRLSMILKLSKNKYRLSQLANELKA
                     TMQEAHRNVTRLIDSGLVFKDGEGDLCLTSYGKSIVYLLPAYEFLSANKQYFLEHSIE
                     ELPLKFIQRIGSLKNCEIVFGVMANLQHWKKLYSNSQVYIKEIMSQVPLDLIEPVSNK
                     IQTGIKFSYILSKDTVIPQGRTEILEKIGWHNMISKGMVERKMLAKVRIMTIFNEKEA
                     CLLFPTLKGEPDLNIMFYSKDSDFHEWCEDFFNYQWEIAGPFDEKKLLET"
     gene            2481..2711
                     /locus_tag="VLA74_03825"
     CDS             2481..2711
                     /locus_tag="VLA74_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSF49867.1"
                     /translation="MPSAFVLLNTELGSEDSIVRDLKSLEGVKEVFQVYGVYDIIAKV
                     ESDTMDKVKEIITWKLRKLTGVKSTLTMIVME"
BASE COUNT         1020 a          389 c          513 g          960 t
ORIGIN      
        1 aattactatt tgtaatattc ttgaaattcc aattaatttt tttgaagaaa atttattttt
       61 cctaaataca ttcatcccac tatttcttag tattgctaac ggaaaggatt tgatacattt
      121 ttgttctctt gtttcaaaat acttataatt aaaaaggatg ttattttttt tactcaaatt
      181 gaaataaaaa agaaaataaa tttaaaataa ataaaattat agtttattga attgtatctg
      241 cgaacatctg atgttaaaag tgattattat ctgggaaaag aagtttctct tagaggatgg
      301 attcatcgaa taagaaagca gaaagaaaat tcttttttgt tgttacgtga tgatagaggg
      361 ggtgtcattc aaagcatctt tccttcatcc aaaactaata atttaacaat tgaatcgtca
      421 atagagatta agggaatcgt gcaaaaggat actagagccc cagagggagg atacgaaatt
      481 aagggaacta caatttatgt gtatagcctt tctaaaccag actatccgct gggtgaatat
      541 actagccctg atctgctttt agaatacaga catctcacga acaggacaag aaaaatgata
      601 atgatgtcga aagttcgttc ttcgattcta cgatatgctc gagactggtt tattcataat
      661 gattggtatg aagtaagtgc ccctgtcttg gtaaagggat cagtagaggg aggatctact
      721 ctttttaaat taaaatattt tgatgattat gcatttcttt ctcaaagtgc ccaattatac
      781 ctcgagtcga tgattttttc attgggacct gtgtggtcac taactccttc ttttagagca
      841 gaaagatcta gaactgttag gcatttagct gaatttctgc atttagaggc agaagctcca
      901 tgggttacat tagaggattt aatgaaaata caagaaaagc ttgtcttatt tattataaag
      961 aataccatta aggagagaag ccatgaattc gattttttga aaagagatat ctcctcactg
     1021 gaacaaatat ctataccttt caagaaaatt acatatgaaa aagccattca gtcattacaa
     1081 aaaaaggatt atcatattgt cgataatgat gtttctagaa tgatagaatt tggtgatgac
     1141 cttaatatcg aatcagaaag aatcattacc gaagattcta ttactccaat ttttataaca
     1201 cattatcctt taaaaatcaa acctttctac gtgaaagaag atcccacaac tgctgatgta
     1261 ggacttgctg tcgatctatt ggccccctac ggattcggag aaatatctag tggtggaata
     1321 cgagaagata atctcgaaaa attaattaga caaatacact ctgaagggtt agattctact
     1381 gactatgagt ggtatttgga tttgagacga tatggttcaa tcccacatgg tggatttgga
     1441 attggtatag aacggttgat taggtggata ctcaatatcc aggatatcaa ggatactgtt
     1501 ccttttccaa ggacgatgtc taggattagt ccataatcct atttatttta tctattaatt
     1561 ttttcatttg aaataaccat tcaagtttaa atctttgaag caaattatat tatattgcat
     1621 taaaaatggg tgacaatttt ccagaaaata cagagtcttt attttttgag ctagctggcg
     1681 atttaagact ttcgatgatt ctgaagcttt cgaaaaataa atacagattg tcacagcttg
     1741 ctaatgaatt gaaagccaca atgcaagaag ctcatcgaaa cgtcaccagg ctaattgatt
     1801 ctggactggt attcaaagat ggcgaaggtg atctgtgttt gacttcttat ggaaaatcta
     1861 tcgtatatct tttacctgca tatgaatttc tttcagcaaa taaacagtat ttcttggaac
     1921 attcaattga agagttgccg ttaaaattca ttcaaagaat aggatcgtta aaaaattgtg
     1981 aaattgtttt tggagtcatg gcaaatttgc aacattggaa gaagctgtat tctaattctc
     2041 aagtttacat aaaggaaata atgtctcaag ttccacttga tttaattgaa cctgtaagca
     2101 ataagattca aacaggaatc aaattttcat atatcctttc aaaagatact gtaataccgc
     2161 aaggaagaac tgaaattctt gaaaaaatag gttggcataa tatgatttca aaaggaatgg
     2221 tcgaaagaaa gatgcttgcg aaggtgcgaa taatgacaat ttttaatgaa aaagaggcat
     2281 gtttattatt tccgacccta aagggagaac ctgatctgaa tatcatgttt tatagtaaag
     2341 acagtgattt ccatgaatgg tgtgaagatt ttttcaatta ccaatgggaa atagcaggtc
     2401 cttttgatga aaaaaaattg ttagaaacat aatccttgca tttcatcatg tttttatatt
     2461 tcattttagt aagaacttat atgccaagtg cgtttgtttt actaaatact gagttaggca
     2521 gtgaagattc tatagtccgg gatttaaaaa gtcttgaagg tgtaaaagaa gtttttcaag
     2581 tctatggagt ttatgatatt atagcaaaag tagaatccga tactatggat aaagtgaaag
     2641 agataataac atggaaatta agaaaattga caggagtaaa gtctacttta acaatgattg
     2701 taatggagta atagtaatca ttaataaatt ttaatttatt catctatttt aactcggata
     2761 ttggaataat ttaaaaatag tttattatct tgataatgat atggggttat ctaatttctt
     2821 acgtagaaaa aaggaagata aatctataaa atctaatgat aaattcaaat gtaaacattg
     2881 ta
//
LOCUS       DATIAS010000197         2528 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_989053, whole genome shotgun sequence.
ACCESSION   DATIAS010000197 DATIAS010000000
VERSION     DATIAS010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989053"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VLA74_03830"
     CDS             complement(<1..496)
                     /locus_tag="VLA74_03830"
                     /inference="COORDINATES: protein motif:HMM:NF025897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4443 domain-containing protein"
                     /protein_id="HSF49868.1"
                     /translation="MQNPIKILSRISSKYAPSRNLSFGIAHIFKTLQLASAYGHISRS
                     LLCKELNLGEGSVKTLIKHLKMNEMIITSQLGTILTNKGKVILRDLLTLIPSETIIPK
                     SSITLGKFNYCVLLKNSAKLIGSGLEQRDEAIKLGATGATTLIFSNGKFLIPETEYDA
                     LNKEN"
     gene            779..994
                     /locus_tag="VLA74_03835"
     CDS             779..994
                     /locus_tag="VLA74_03835"
                     /inference="COORDINATES: protein motif:HMM:NF021038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB domain-containing protein"
                     /protein_id="HSF49869.1"
                     /translation="MTLSRQIQIRDDKIPKLAIGILSVVLLFGLFMIGYDQGQLFSIV
                     QGEKAFEDLFVHELFHDMRHAAGFPCH"
     gene            1013..1741
                     /locus_tag="VLA74_03840"
     CDS             1013..1741
                     /locus_tag="VLA74_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HSF49870.1"
                     /translation="MKSFTFIFISVFSGAIAGTFLGVINLGIVEPFLDNAIGIEVQNA
                     IKDGEAIDQNELQSYRIWQKVGQIAGGTILGLSFGALFGITFLFGRNMLPGSNNQRKA
                     VILAGIIWLVIFVVPALKYPPNPPTVGDPETIYERQNMYIIFTAISGITALALAVTYE
                     KMGRNQVKKFGVVSFAYAIVMIGAFIIVPQNPLEITAPIDLVQGFRIASGFSMSMFWL
                     LLGIIFGSLWEKFKPIQNQKITTF"
     gene            complement(2199..>2528)
                     /locus_tag="VLA74_03845"
     CDS             complement(2199..>2528)
                     /locus_tag="VLA74_03845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49871.1"
                     /translation="IGGICEVRLQKDMNFKINGQWATIGDETTPWHIHLNIDQVGEAR
                     FVREFNESHNRQSYSIRFFDVRGNLIMRANFSKLYDTNGNLIQEKVSKFQSIFEKYGK
                     QESLRLV"
BASE COUNT          856 a          392 c          415 g          865 t
ORIGIN      
        1 tattttcttt gtttaatgca tcatattccg tttcaggaat aagaaattta ccattagaaa
       61 agataagagt tgtagctcct gtagcaccca atttgatagc ttcatcacgt tgttccaatc
      121 ctgatccgat cagcttggca gaatttttta ataacacgca ataattaaat tttcctaaag
      181 tgatggaact ttttggaatt atagtttctg atgggattag agttagaaga tcacgtaaaa
      241 taacttttcc cttatttgtt agtattgtgc ctaattgact ggtaattatc atttcattca
      301 ttttcaaatg ttttataagt gtcttaaccg acccttcgcc aagatttaat tccttgcata
      361 aaagagatct actgatatga ccatatgcac tagctaattg taaagtctta aaaatgtgag
      421 caataccaaa agataggttc ctgctagggg catatttact cgagattcta cttaatatct
      481 tgataggatt ttgcatgggt atttcttaaa tatctaatgt caataatcaa atttatttat
      541 ttgtatcgat attttattta aaattcataa attaagtatc ccgaatttca tacaaaaatt
      601 atatatattt taatagtttg aagattaaat aaaatacaaa atatttaata gataatgcga
      661 tctagaatat catcacaaaa tgatctgatg atgtattttt aatataaatc aaagatatta
      721 ctcggttgga taaactagac aacactttat atactacttg ctagtatctt catcactaat
      781 gacattatca agacagattc agatccgcga cgataaaatt cctaaattag ctataggaat
      841 tctttcggtg gtcttattat ttggtttatt tatgatcgga tacgaccaag gacaattatt
      901 tagcattgtt caaggagaaa aagcatttga ggatcttttt gttcatgagt tatttcatga
      961 catgagacat gctgcaggat ttccctgtca ctaatttttt aggtaataaa tattgaaatc
     1021 gttcactttt atttttattt ctgttttttc tggagcaata gcgggaacat ttttgggcgt
     1081 tattaacctc ggtattgttg aacctttttt ggataatgca ataggaattg aagttcaaaa
     1141 tgcaataaaa gatggggaag caatagatca gaatgaatta caaagctatc gaatatggca
     1201 gaaagtcggt caaatcgctg gaggcactat tttaggattg tcatttggag ccctttttgg
     1261 tattacgttc ctttttggaa gaaacatgct tccaggttca aataatcaaa ggaaagcagt
     1321 gattcttgca gggattatat ggctggtaat ttttgttgtt cctgcactca aatatccacc
     1381 aaatccccct acagtcggag accctgaaac gatctatgaa agacagaata tgtacattat
     1441 tttcacggct atttcgggga ttaccgcact tgcactagca gtgacatatg aaaaaatggg
     1501 cagaaatcaa gtcaagaaat ttggtgtcgt ctcattcgca tacgcgattg taatgattgg
     1561 tgcattcatc attgtaccac aaaatcctct tgaaattact gcacctatcg atttagtcca
     1621 gggatttaga attgcaagtg gatttagtat gagcatgttt tggttacttc ttggaataat
     1681 atttggaagt ctatgggaaa aattcaaacc tatccagaat cagaaaataa caacattctg
     1741 acaaaaaata aaaaaaattt ctctttttta tctactattt atcgcatctc caaataaaat
     1801 aatacgaatt taagacttta aacgtaggaa gaaagcgtaa atgcattatg aagagacaat
     1861 aattcatgtg taaatgatct gaattggaga tctggaccag atgttaaatg gattaacatc
     1921 cataaattca ttaattgcaa gtgtcattta tgggatttaa ttaattctga tccggactca
     1981 aatactggga tagacggtgt ggattatgat cttcaactaa gattagatgc taacaaaata
     2041 aatgcagtaa aataacttaa agagatatct atagaaggat atacgaagac aattaaatcg
     2101 aataaagaaa attatactaa aattatccaa aaaggaacta attatattaa tttaaatctt
     2161 gacctagcag acatttaata tgttctacaa agggtttttt ataccagacg taatgattct
     2221 tgtttaccat atttttcaaa gattgattga aattttgaga ccttctcttg aatcaaattt
     2281 ccattggtat catagagttt tgaaaaattt gcccgcatta tcaaatttcc tctgacatca
     2341 aaaaaacgga tactgtaact ttgacgatta tgggattcgt tgaattccct aacaaatctt
     2401 gcttctccaa cttggtcaat gttaagatga atgtgccaag gagttgtctc gtcacctatc
     2461 gtcgcccatt gaccgttaat tttaaaattc atatcttttt gtaacctcac ctcacaaata
     2521 ccaccgat
//
LOCUS       DATIAS010000198         2046 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_989253, whole genome shotgun sequence.
ACCESSION   DATIAS010000198 DATIAS010000000
VERSION     DATIAS010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989253"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VLA74_03850"
     CDS             <1..235
                     /locus_tag="VLA74_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49872.1"
                     /translation="IFLLGLSLRNTSKALDIFDDEKRSHIVIWNWIQRFAEYPIYKRK
                     RVSAFIIHETVIKIGSQHYWLWICIEPVHSSVL"
     gene            260..595
                     /locus_tag="VLA74_03855"
     CDS             260..595
                     /locus_tag="VLA74_03855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49873.1"
                     /translation="MLVAEKFIRSLVEKYGKHTVYTDGGTWYDEACNVLRLKHYLHSS
                     VEKSLMERVNQYFKDRIESFDDYYPCMQKEECNLLHVHNWIQFFVSMYNDTIANNNNC
                     FELGAVNIS"
     gene            complement(995..1651)
                     /locus_tag="VLA74_03860"
     CDS             complement(995..1651)
                     /locus_tag="VLA74_03860"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HSF49874.1"
                     /translation="MVIKVKNTKQKKKENKKKKNIKSSVSKQTSTTNLAVVFDKHVNC
                     EFEDKDVDATMKTMTKDPYVYHVPVLTGGTGYNEVHTFYSNNFVGKMPSDTKFVRISR
                     TIGKDQVVDELIISFTHDIEIPAMIPRIPPTGKYVELPLVVVMKFKGNKIAHEHIYWD
                     QASLLKQIGLLDFTNTNNNELPIIGIEQSKKLQELLSLYTQKKTQKKKAMETVTKVKT
                     "
BASE COUNT          685 a          271 c          303 g          787 t
ORIGIN      
        1 tattttcttg cttggcctca gtttacggaa tacttccaaa gcattagata tattcgatga
       61 cgagaaacga agtcatattg ttatatggaa ttggattcaa agattcgcag aatatccgat
      121 ttacaaaagg aaaagagtat cagcattcat tatacatgag actgttatta aaattggtag
      181 tcaacattac tggttatgga tttgtattga accagtacac agttctgtgc tttgaatata
      241 catttcagaa gagagaaata tgcttgttgc tgaaaaattt attagatcat tagttgagaa
      301 atatggaaaa catacagttt acactgatgg aggtacgtgg tatgatgaag cttgtaatgt
      361 cttgagatta aaacattatt tacattcatc agttgagaag agtttgatgg aaagagtcaa
      421 ccaatacttt aaggatagaa tcgagagttt tgatgattac tatccatgta tgcaaaaaga
      481 ggaatgtaat ctattacatg tacataactg gatacaattc tttgtatcta tgtataatga
      541 tacaatagca aataataata attgttttga gttaggagcg gtgaatatat cttaaattaa
      601 cagagccaaa gattatgagt ataatatcac atggtctctt ttttcattat cattactggt
      661 taattcaata gcagatgatg gatatgttaa agattttgta actggcaatt ctgaaaatct
      721 ttggttttgg aagctcttct atataacaga ttttattata atttccggag ctttattgtg
      781 gtataatagg tttcatattc cacattcaaa gaaaattaaa attgaataat cataataatg
      841 aggtatgttt gtatatatat ttagcagaaa tggttacatc agaataatac cgatagcggt
      901 tctaaaataa gagtctactg tagagatact actatctggt aattagattt tattattaag
      961 aacctattta attgcaattt ttaaaaatat tatattatgt tttaacctta gtaacagtct
     1021 ccatagcttt tttcttctgt gtcttctttt gagtatacaa agataataat tcttgaagct
     1081 tttttgactg ttctatacct attattggaa gttcattatt gttagtatta gtaaagtcta
     1141 ataatcctat ctgttttaat agtgaagctt ggtcccaata gatatgttca tgagctattt
     1201 tgtttccctt gaatttcatt accacaacaa gtggtaactc tacatatttt cctgttggag
     1261 gtattcttgg aatcatagca ggaatctcta tatcatgtgt aaagcttatg attagttcat
     1321 caacaacctg atctttacct attgttcttg aaattcgtac aaatttagta tcagaaggca
     1381 ttttacctac aaaattattg ctgtaaaaag tatgaacttc attatatccc gtacctccag
     1441 ttaatacagg tacatgatat acgtatgggt cttttgtcat agtcttcatt gttgcatcta
     1501 catctttatc ttcaaattca caatttacat gcttatcaaa aactacggca agattagtag
     1561 tagaggtttg cttactaact gatgatttta tattcttctt ttttttattt tcttttttct
     1621 tttgttttgt attttttacc tttattacca actaaatatc ctttttataa ttaaataata
     1681 aagatatcta atcaatcaat aattcaatta attagattta acatcaatta acctctctat
     1741 taacttcatt attatttgga tattaataaa agctacaata tcttattgat tggattcatc
     1801 ttctttcata ttcaggttca cttagaaaga caataaggtg ctctggagta gattcatgca
     1861 tatagtaggg ttctactatt gtcttgtatt tagcttttat tattagaact tattttaaca
     1921 tatttgagct ttaataacat atatactaaa attaatatat taatttgcaa aagtagaagt
     1981 tagttaaata taatacttta tgattgaata aaacaaatac aaatgactca tttatctttc
     2041 ccagac
//
LOCUS       DATIAS010000199         4817 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_580740, whole genome shotgun sequence.
ACCESSION   DATIAS010000199 DATIAS010000000
VERSION     DATIAS010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4817
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580740"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VLA74_03865"
     CDS             <1..594
                     /locus_tag="VLA74_03865"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSF49875.1"
                     /translation="TGTHDMIIKNNTVYDNGYSGIICSLDCYNITIEGNEVYNNGNTG
                     KGRSIAFSINMYDSVVRNNYVHHQNIGIGISGGSHDNKVYNNNISDSKVGINTIEKSS
                     NNNIYNNTIMNSINGIVVQTGASDNTIHFNKIVNAREFGILNVKGDTGTVGNTFENNK
                     LVNSKVNTNSTTTSTTIAVDDGNDDDELEKEKGKKKK"
     gene            complement(606..800)
                     /locus_tag="VLA74_03870"
     CDS             complement(606..800)
                     /locus_tag="VLA74_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49876.1"
                     /translation="MKREIEKWNNFSSVLRKQNREIFKEMLQSSLNKYSNAINTKGEQ
                     LSTDSLIMSLLFEQYKIRIS"
     gene            complement(1243..1641)
                     /locus_tag="VLA74_03875"
     CDS             complement(1243..1641)
                     /locus_tag="VLA74_03875"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HSF49877.1"
                     /translation="MVIFVSSLFEKSVYAQNTTTTATTTTIGSKIPYYVFPTEIEGIE
                     EEILKIPHDAYSVQTIFAKKGDNLTIKFYNTEAEERHTFTLDTPYNINKDLAGAQNTT
                     INFVADKEGIFTYYCVYHLPTMTGKLVVLP"
     gene            complement(1838..2269)
                     /locus_tag="VLA74_03880"
     CDS             complement(1838..2269)
                     /locus_tag="VLA74_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49878.1"
                     /translation="MSANEDMDNTKFLFTFTKNILNSDKSIRWVGITDQNGIIINEHF
                     REQLKPLLTVEENHEFAKNSITRYKTRLKLESKIGKLTFLFRRYEKLNRSIIPINENY
                     YLLLNVDFEENNSDKIIMEKIIPLIRKKKNEDDICYFNLAI"
     gene            2556..2861
                     /locus_tag="VLA74_03885"
     CDS             2556..2861
                     /locus_tag="VLA74_03885"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HSF49879.1"
                     /translation="MINKFNVDPDKTEQFVKDWAKDATKFKQQPGFVSAQLHKGIGKS
                     SIFINYAVWESIAHYKEAVNKLVFSSETQSGLLKYDDDSLVISPHLFKKVAVHGICS"
     gene            3336..3620
                     /locus_tag="VLA74_03890"
     CDS             3336..3620
                     /locus_tag="VLA74_03890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49880.1"
                     /translation="MGSAWIHPDLHSPHCTQNSGDTNTLYIRETINGKQQFIPMGAYC
                     RCCGAFDVYPQWEHKNNQKFEIVKRRIPREYTINYDDDPDKKKEQYKINN"
     gene            3793..4089
                     /locus_tag="VLA74_03895"
     CDS             3793..4089
                     /locus_tag="VLA74_03895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49881.1"
                     /translation="MYELTIIFVTTKFTNNHFIFYLSSFPLFFISRRIITIIKIINII
                     ARRGLNKLFRARIHIAIAKTTMNSRRKTDDLSLEGYDNNNKSEINSVHRFLYIL"
     gene            4289..4489
                     /locus_tag="VLA74_03900"
     CDS             4289..4489
                     /locus_tag="VLA74_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49882.1"
                     /translation="MACKGICIRYKADRPTKGSKRYSIGQKRCQTCDIFIKRDGFWCP
                     CCGYRLRSGPRKKEQKKKNIKM"
     gene            4635..>4817
                     /locus_tag="VLA74_03905"
     CDS             4635..>4817
                     /locus_tag="VLA74_03905"
                     /inference="COORDINATES: protein motif:HMM:NF013641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSF49883.1"
                     /translation="MDLRNKVAIVTGAGGTVGRDITKSLISEGCKVVINGRDVRKLNS
                     LAREIGDKNNLLILPGD"
BASE COUNT         1753 a          614 c          714 g         1736 t
ORIGIN      
        1 actggaaccc atgatatgat aatcaaaaac aatactgttt atgataatgg ttattcaggc
       61 attatatgtt cacttgattg ttacaatata acaattgaag gtaatgaagt atacaacaat
      121 ggtaacactg gaaagggaag aagcattgca tttagtatta atatgtatga ttcagttgta
      181 agaaataact atgttcatca ccaaaatata ggtataggta taagcggtgg atcacatgac
      241 aataaagtct ataacaataa catttcagat agcaaagttg gaataaatac aattgaaaaa
      301 tcttctaaca ataacatata caataatacc atcatgaatt ctataaatgg tatagttgtc
      361 caaaccggtg catctgataa tacaattcat tttaataaaa tagtaaatgc tagagaattt
      421 ggaatattaa atgttaaagg agatacaggt acagttggca atacatttga gaacaataaa
      481 ctagtcaatt ctaaagttaa tactaatagc actactactt ctactactat agcagtagat
      541 gatggtaatg atgatgatga gttagaaaag gagaaaggaa agaaaaagaa gtagcatcaa
      601 ggagactatg atattcttat tttatattgt tcaaacaata gagacattat caatgagtct
      661 gttgaaagtt gttccccttt agtatttatt gcatttgaat atttgtttaa tgatgattgt
      721 aacatttctt taaagatttc tcgattctgt tttcttaaaa cagaagaaaa gttattccat
      781 ttttctattt ctcttttcac aattgtattt caatcattat tatttacgtc attgaaatta
      841 gaagaagatg aaaaagactt tacaaatttt tttcttttaa aatcttataa ttatgtaaaa
      901 ctattgacat cataatagga tgtattctaa taggatttac agcatatacg aacaagccga
      961 attgtataat cttgctattg aaaacatatg gtcaaatact ttttttgttt gcaaaagtgt
     1021 ttgctttttg agaagaatat ttcaacaaca aagagaacaa ataacagaga gttatatgaa
     1081 taatagcaat aataacaaca aagagaacaa tatttctttg tgtatactag attttagaaa
     1141 atgattagtt agaagaaaat aaaaaaatag gattagtaat taattatcat tatctttttg
     1201 ttattgctat ggttatggtt atggttgtga ttatgattat gattatggca aaaccactaa
     1261 ttttcctgtc atggttggca gatgatatac acaatagtat gtgaatattc cttctttatc
     1321 tgcaacaaaa ttaattgtag tgttttgtgc tcctgctaga tctttattga tattatatgg
     1381 agtgtctaat gtaaaggtat gtcgttcctc tgcttcagtg ttatagaatt taatagttag
     1441 gttgtctcct ttctttgcaa aaattgtttg tactgaataa gcatcgtgtg gaatttttaa
     1501 aatttcttct tcaattccct cgatctctgt tggaaagaca tagtatggga tttttgatcc
     1561 tatcgtcgtt gttgtcgcag ttgtcgttgt attctgtgca tatactgatt tctcaaaaag
     1621 agaagaaaca aagataacca atagtattgc tatacttatc gtacaagaaa ccagaattag
     1681 ttttatgtct taattgtgaa aacattatag aaatatttta acttttatac aattctttca
     1741 acttagaatg actatattat tatcggaata atttttctta ttgcagtttc tacgaagaaa
     1801 aataataagg gattatataa aaaaagaaag tttagcatta aattgctaaa ttaaaataac
     1861 aaatatcatc ctcattcttt ttctttctta ttaagggaat gattttttcc attattattt
     1921 tatcagaatt attttcctca aaatctacat ttaatagtaa ataataattt tcattgattg
     1981 gaattataga cctattcaat ttttcatatc ttctaaacaa aaaggttaat ttacctattt
     2041 ttgattcgag ttttaatcgt gttttatatc tagttattga attttttgca aattcatgat
     2101 tttcttctac ggtaaggaga ggttttagtt gttctctaaa atgttcattt ataataatac
     2161 cattttgatc tgtaatacca acccatctta tagatttgtc tgaattcaat atatttttgg
     2221 taaacgtaaa aaggaatttc gtattatcca tatcttcatt tgccgacatt tttaattcaa
     2281 gtaatttttg attgtaataa aaaagttatc aacattgata attaatttct ttaaattcat
     2341 ttcattgctt ctcacaaaat tttctcaaac tcctttttac ttcgcttttt acccaaatga
     2401 caagtcagaa tgttttttct gttattattg tgaaaaagaa tcatttattc tattatatac
     2461 attatattat tattatggca aaatttgttg aaatggatga tatagtgaaa ttttaagaac
     2521 agattgaagg aaaaggaata gagggttcag taattttgat aaacaaattt aatgtagacc
     2581 cagataaaac tgaacaattt gtaaaggatt gggcaaagga cgctactaaa tttaaacaac
     2641 agcctggatt tgtctctgca caattacata aggggattgg caagagttct atattcatta
     2701 attatgcagt ttgggagtcg atagcacatt ataaggaagc ggttaataaa ttagttttca
     2761 gttctgaaac acaatcaggt cttttaaaat acgatgatga tagtttagta atttcaccac
     2821 atttattcaa gaaggtagca gttcatggaa tatgtagttg agagtaagta aaatattatt
     2881 aatgaaaact ggttgtaata acaaaattat tattgaatct ttgttttact tcctctcatt
     2941 taccttctgg tttttatttt attcaattta atttaattca attaaaacat tttcttctgt
     3001 ctctaaattt tactaatttg ctaataggat atagtgatag aagccggtaa tcaataaaaa
     3061 caaaaaatct gatatactcg tcatttttat tatttatcac agagtaagaa tagaaaattt
     3121 tatacttaaa gattatttca aaaatttcag aaaactatca ttttttgtga ttattcataa
     3181 taaaatttct gttttacttc ctcttttatc ttctggaact tcataatata ctagtagatt
     3241 ttttactaac ctactagata ttaagtaact agtattctag tagatcagag actagtatac
     3301 taatatattt atttaggata aatcttatta aaagtatggg tagtgcttgg atacatccag
     3361 atctgcattc accacattgc acacaaaata gtggagatac caacacatta tacataaggg
     3421 aaacgattaa cggaaaacag caattcatac caatgggtgc atattgtaga tgctgtggag
     3481 catttgatgt ttatccacaa tgggagcaca aaaataatca aaagtttgaa atagtcaaac
     3541 gtagaatacc aagagaatac acaataaact atgatgatga cccagacaag aagaaagaac
     3601 aatataaaat aaataactga ttaattattt tttggataaa ttatattatt attattattt
     3661 ctaacaaaat tattctcaaa ctttctcttt acttcttcct tcttcatttt gtggttagaa
     3721 ctctttgaat ctatcttcta attggttttc tttttttaat taacaaattt gacaccaatc
     3781 aaaaccattt tcatgtatga actcaccatt atcttcgtca ccacaaaatt cacaaacaat
     3841 catttcattt tttacctttc ttcttttcct ttattcttca tatctagacg tataatcaca
     3901 atcattaaaa tcattaatat catagcaaga aggggattaa acaagttgtt tagagcaaga
     3961 atccatatag caatagcaaa aacaacaatg aatagtagaa ggaaaactga tgatttatcc
     4021 ttagagggct atgacaataa taataaatca gaaattaaca gtgttcaccg atttttatat
     4081 attttataaa taaaagatat attactctgt tagcatcaaa ggcaaattcc gaagttttcc
     4141 ataaccctct atctcgatgc gcttggttac ataagaggaa gagggctatg acaattaaat
     4201 aatttattta tttatctatt actctaggga tatcatataa agatagatta ttatggtttc
     4261 aaacagaaga atttaatcaa tagcaataat ggcttgtaag ggaatttgta tacgctacaa
     4321 ggcagacagg cctacaaaag gaagcaaacg atattcgata ggacaaaaac gttgtcagac
     4381 ctgtgatata ttcattaaac gggatggttt ttggtgtcct tgttgtggat atcgattaag
     4441 aagtggtcct agaaaaaaag agcaaaaaaa gaaaaatatt aaaatgtaga attaggattt
     4501 caatctttta ttttataatt cagtaaagtc tttacctttt gatttggata tttactaaaa
     4561 ctagagtata aaaatatcga ttcaaaatga gcaatgattt aaaatgatgc gattattatt
     4621 tttatttatc ttctatggat ttaagaaata aagttgctat tgtaaccgga gcaggaggaa
     4681 cagtaggcag ggatattaca aaatcattaa tttctgaagg ttgcaaagta gttattaatg
     4741 ggcgtgatgt cagaaaactc aatagtctag caagggaaat aggcgataaa aataatttgt
     4801 tgatccttcc aggggat
//
LOCUS       DATIAS010000200         2437 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_35488, whole genome shotgun sequence.
ACCESSION   DATIAS010000200 DATIAS010000000
VERSION     DATIAS010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35488"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VLA74_03910"
     CDS             <1..447
                     /locus_tag="VLA74_03910"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HSF49884.1"
                     /translation="EYYSGKKKKHTVKTQLMVNKEGKILHKSNQHKKGKQHDYSVYKD
                     EHPITPPQVKNYFDLGYHGIENDFPDLKAVLPIKKKRNIELTKKEKRYNKRHSRQRVI
                     VEHTICRIKKFGVMGNKYRNRLKRYDVMSDIVSGLVNYKIIHSIRR"
     gene            complement(487..1038)
                     /locus_tag="VLA74_03915"
     CDS             complement(487..1038)
                     /locus_tag="VLA74_03915"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSF49885.1"
                     /translation="MFRSYTIFICIFFPLPQLNELSFEARIVLASTVWMAIWWITEAI
                     PIYVTALLLLVIFPSLNVMDIKETSANYADQIIFLFLGGFLLAKGLEKSNLHRRFAFT
                     ILKIFGTNPKYIVAAFMGVTWLLGAWMSNTATTILMLPIALSVISLLGNIDKQGRFVR
                     CLLLSVAYAASISGVTTLDHLRN"
     gene            1343..>2437
                     /locus_tag="VLA74_03920"
     CDS             1343..>2437
                     /locus_tag="VLA74_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF49886.1"
                     /translation="MVTEIAIGQIIQDLSVLMIVASVMTFISYKLKQPLVIGYIIAGI
                     IIGPHSPPFSLVLNLDILNLFAEIGVILLLFVVGMEFPLERLRKIGKKAFIIASSEAF
                     GTFAIGFSVSFFILNFSIFDSAFVALAISVTSTIIIMKVLEELDIIKEEASYIVLGVA
                     IIEDIIIVSMLAVLQSISTSSGEFSIVDILISISITLAFIFGVLLLGSKIVPKFINFI
                     GKYNQHEVLLLVVLGVAFGLSFLSYELGISIAAGAFFAGVLVAESKVHAVTRLLATPI
                     RDMFGALFFVSVGALMDMTLLVVFIIPAIILVIVSIAAKFLTVFVSAKSQRFSSIDSM
                     KAAFGLSSSGGELALVVAKGGVNTGLTSAFL"
BASE COUNT          871 a          332 c          393 g          841 t
ORIGIN      
        1 gagtactatt ctggtaagaa gaaaaaacat actgtaaaga cacaacttat ggtaaacaaa
       61 gaaggaaaga tactgcataa atcaaatcag cacaagaaag gaaaacagca tgattattct
      121 gtctacaaag atgaacatcc aataacacca ccacaggtta aaaactattt tgaccttggc
      181 tatcatggaa tagaaaatga ctttcctgat cttaaagcag tattaccaat aaaaaagaaa
      241 cgtaatattg aacttaccaa aaaagaaaag agatacaata aaagacatag tagacagaga
      301 gtaattgtag agcacactat ctgcaggata aaaaaatttg gtgttatggg aaacaagtac
      361 agaaacagat tgaaacggta tgatgtaatg tctgatattg tttctggttt ggttaactat
      421 aaaataatac acagtattag aagataatcg taattgattg taatgataag acagtgtaga
      481 ttttatctaa ttacgcaaat gatctaatgt tgtgacacca ctaatacttg cggcgtatgc
      541 tacagaaagt aatagacatc tcacaaatcg gccttgttta tcaatgttac ctaataaaga
      601 aataacagat aaagcaatag gaagcataag tatggtagtt gcagtattac tcatccatgc
      661 tccaagaagc catgttactc ccataaatgc agcaacaata tattttggat tagttccaaa
      721 tattttcaat attgtaaatg caaatcttcg atgtagattt gatttttcta gacctttagc
      781 taataggaaa ccaccaagaa atagaaaaat aatttggtct gcataatttg ctgatgtttc
      841 tttaatatcc ataacattaa gagaaggaaa aattacaagt agtagtaaag cagttacata
      901 aataggaatt gcttctgtta tccaccatat cgccatccat actgtcgaag ctaaaactat
      961 tcttgcttca aaagataatt catttaattg tggcaatgga aaaaaaatac aaataaaaat
     1021 agtataggac ctaaaaataa accaattctt ccggcaagat ttttagaaat catctattta
     1081 tgcaatatta ctatataaca taagtaataa atggtaaaaa aaagtttaat tcagtcttat
     1141 taaatactaa taataaaaaa cctttatcct gaattgtctt aaaagaaaat attagatcgt
     1201 catttaacaa ctataatatg gattttagtt attgttattt tgaattatat ttacatcatt
     1261 tttattttat tttattttat tttaatcatt cgtttattcc tttagttatt atactctttt
     1321 attttaatag tatttgttaa aaatggtaac agagattgca ataggacaga ttatccaaga
     1381 tttgtcagtt ctaatgattg ttgcttctgt tatgacattt atctcatata aattaaaaca
     1441 accattagtt attggttaca taatcgcagg aataataata ggacctcata gtccaccatt
     1501 cagtttggta ttgaacctag atattttgaa tttgtttgca gaaataggtg taattctttt
     1561 attgtttgtt gttggtatgg aatttccatt agaaagactt cgcaaaatag gaaagaaggc
     1621 attcataata gcatcatcag aagcatttgg aacatttgca ataggttttt cagtaagttt
     1681 ctttattcta aacttttcaa tttttgattc agcatttgtt gcacttgcaa tttctgttac
     1741 tagtacaatt attattatga aagtattaga agaactagac ataatcaaag aagaagcatc
     1801 atacatagtt ttaggagttg caataattga agatattata attgtatcaa tgttagcagt
     1861 attgcaatct attagtacat catcaggcga gttctctatc gttgatattt taatatctat
     1921 tagcataacc ttggcattta tttttggtgt cttattgcta ggatcgaaaa tagtcccgaa
     1981 atttataaat tttattggca aatacaatca acatgaagta ctattacttg tagttttagg
     2041 agttgcattt ggattatctt ttctttctta tgaattgggt atatccattg cagcaggtgc
     2101 cttttttgca ggcgtattgg tagcagaatc aaaagttcat gcagttacga gacttttagc
     2161 aactccaatt agagatatgt ttggagcatt attttttgta tctgttggtg ctttaatgga
     2221 tatgacattg ctagtagtat ttattattcc tgctatcata ttggtaatag tatcaatcgc
     2281 tgccaaattt cttacagttt ttgtttcagc aaagtctcag agatttagtt cgatagattc
     2341 aatgaaggca gcatttggtt tatcatcttc aggtggagaa ttagcacttg ttgttgcaaa
     2401 aggaggggtt aatacaggtc ttacaagtgc atttcta
//
LOCUS       DATIAS010000201         2281 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1534003, whole genome shotgun sequence.
ACCESSION   DATIAS010000201 DATIAS010000000
VERSION     DATIAS010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1534003"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VLA74_03925"
     CDS             <1..509
                     /locus_tag="VLA74_03925"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49887.1"
                     /translation="IHEKEWTGDTVTDICIRYNTSTKTYYKWKNRYLKYGIDGLQDRS
                     RKPHNIQSGKGTNEIEQEILGLRTTQRFGCNRIRFRLKRLKEISLSTKTIYKILKRHG
                     LNILSCKIRNRKYKRFAMEKPNQMVQMDILGPFYLENSDKKNYFISCEDDCSRKLTSK
                     CSERKRGV"
     gene            614..850
                     /locus_tag="VLA74_03930"
     CDS             614..850
                     /locus_tag="VLA74_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49888.1"
                     /translation="MKKNNIKDKPIPKRYHQLQGKIEAYNKIVKNEFLAVENISSVEE
                     GKIRYSMFVKSYNEEREHMVVSMVILHWKCSFLK"
     gene            1354..2187
                     /locus_tag="VLA74_03935"
     CDS             1354..2187
                     /locus_tag="VLA74_03935"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HSF49889.1"
                     /translation="MVNRKGRIATIIPARNEEKFIGQTLNALLNQDIDNNHIIVVNDG
                     SEDQTKEVVNSFHNIELINIENRGFNAQGSPILAMVINLGLKKLLLQTQVSYDYIMIL
                     GSDHILPSHYISKIVDHMANNKDIAICSGQISGEKSIFPRGSGRLVNTEFWKQIGLQY
                     PLNFGFEAYLLIKAQQLGYKIDILNDLVSYTIRPTRTSYKKETYIAYGKSLRALGYDQ
                     LYAAARIGLISLKNPKGAFYMLKGYTSNDTKLYENDVRNFLKRIQRERIKKYLLMRSQ
                     N"
BASE COUNT          912 a          275 c          395 g          699 t
ORIGIN      
        1 tgattcatga gaaagaatgg actggagata ctgtaactga catatgtatt agatataata
       61 catctacaaa gacatactac aagtggaaga acaggtacct aaagtatgga atagatggtc
      121 tacaggatag aagtagaaaa ccacataata tacaatctgg aaaaggaaca aatgagatag
      181 aacaggaaat actgggttta cgcacaacac aaagatttgg atgtaaccgt ataagattca
      241 ggttaaagag attaaaggag atatcactca gtactaaaac catatacaag atactgaaaa
      301 gacatggtct gaacatcctt tcatgtaaga tcagaaatag aaaatacaaa agatttgcaa
      361 tggaaaaacc aaatcaaatg gtacagatgg atattttagg acctttttac ctggagaatt
      421 cagataaaaa gaactatttt atcagttgtg aagatgactg ttcaagaaag ttaacaagta
      481 aatgttctga aagaaaaaga ggagtataga cgttttagat gtacttgaag actacattgt
      541 agagaatggt aaacctcaca aaatactgca tcataacggt aaacaattta catccaagat
      601 attcaaaggc tttgtgaaaa agaacaatat aaaggataaa cctattccaa aacgttatca
      661 ccaactccaa ggaaagattg aggcgtataa caagatagtt aaaaatgaat ttttagcagt
      721 agaaaatatt tctagtgtag aagaaggtaa gataagatat tctatgtttg tcaaatcata
      781 taatgaagaa agagaacata tggtggtatc aatggttata ctccattgga aatgttcctt
      841 tctaaagtaa gattaaataa ttccattagt aaaaagaaaa tcaagcagat aaaagaaagt
      901 cttacccatg ttggtaagtg aatctgttac ctatctgtgg aagtacaaca attagcaaat
      961 agccttattg tctataggag gctaattttg gggtagactc taaatatact taatcatcaa
     1021 acaatcgcat taagatacat atgatagcat taggtaggtt ctggggcaat atttatgacg
     1081 atccatattc tgtgagtcta aaatgataaa gataaattta gagaatagag caataatagt
     1141 tactataata aaagttataa aatcatcata attatcatta aaaatttcta cgttaaggta
     1201 tagtagcgat atggtaacaa aagattttcc agttgaaata gtgatattgg aaattctgga
     1261 atatttatat atttcctcat aaagtataat aaaagggatt tggcttggat cagttattag
     1321 ttattcaaga aattaaggtt gatgatgatg tttatggtga atcgaaaagg aagaattgca
     1381 acgataattc cagcaagaaa tgaggagaaa tttattggcc aaacattaaa tgcactttta
     1441 aatcaagata tcgataataa tcatattata gtagtaaatg atggatctga agaccaaact
     1501 aaagaagttg ttaattcttt tcataatatt gagctaatta atattgaaaa tagaggattt
     1561 aacgctcaag ggtcaccaat tcttgcaatg gtaattaatc taggccttaa gaaattatta
     1621 ttacaaacac aagttagtta tgattatata atgattttag gatctgatca tattctccca
     1681 tctcattata taagtaaaat tgtagatcat atggctaata ataaagatat agcaatttgt
     1741 tcaggacaga ttagtggcga aaagagtata tttccaagag gttcagggag acttgttaac
     1801 accgaattct ggaaacaaat tgggctgcaa tatccattga attttggttt tgaggcttat
     1861 ctattgataa aagcccagca attaggttat aaaatagata tattgaatga tctagtcagc
     1921 tatacaatca ggcctactag gacttcatat aaaaaagaaa catatattgc ttatgggaaa
     1981 tcacttagag ctcttggtta tgatcaatta tatgctgcag caagaattgg tttgatttct
     2041 ttaaagaatc caaaaggtgc tttttatatg cttaaaggat atacttctaa tgataccaaa
     2101 ctatatgaaa atgatgttag aaattttctt aaacgaattc aacgtgaaag aataaaaaaa
     2161 tatcttttaa tgagatctca gaattaaata attctctctt ttccatatat gtgtatatat
     2221 attgttatta tgaaaaatat aattattatt agatatatat aattttcaca ttatgaatat
     2281 t
//
LOCUS       DATIAS010000202         2109 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_308986, whole genome shotgun sequence.
ACCESSION   DATIAS010000202 DATIAS010000000
VERSION     DATIAS010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308986"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..623
                     /locus_tag="VLA74_03940"
     CDS             <1..623
                     /locus_tag="VLA74_03940"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF49890.1"
                     /translation="LDLRITKRFGCNHIRFRLKRLKEILLSTKTIYKILKRHGLNILE
                     CKIKNRKWKRFAMEKPNQMVQMDILVPFYLENSTHQKNYVISCEDDCSRKVASEWSER
                     KRSIDLLQVLEDYIVENGKPEKVMHDNGKQFTSKIFRHFLQRNNIKDKPIPARYPQLQ
                     GKIEAYNKIVKNEFLAIENIPNIDDGKRMYSMFVKAYNEEREHMVA"
     gene            951..1136
                     /locus_tag="VLA74_03945"
     CDS             951..1136
                     /locus_tag="VLA74_03945"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49891.1"
                     /translation="MYIDDDEDILITMKQILENNGFLVSTFTDPFEALSAFKPGLYDL
                     VLIDVKMPQMNGFEFYQ"
     gene            complement(1388..1630)
                     /locus_tag="VLA74_03950"
     CDS             complement(1388..1630)
                     /locus_tag="VLA74_03950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49892.1"
                     /translation="MGNTISFSDLDLSKNKRILSAEAKYQESKQQWYFHQSSWYRRNN
                     GEGGYDGKGCNQFTGCISECKFYRENGRLGENEGFN"
BASE COUNT          828 a          296 c          299 g          686 t
ORIGIN      
        1 tactagattt acgtataaca aaaagatttg gttgtaatca tatccgattt aggttaaaaa
       61 gactaaagga gatattactc agtactaaaa ccatatacaa gatactgaaa agacatggtc
      121 tgaacatcct agaatgtaaa atcaaaaaca gaaaatggaa aaggtttgca atggaaaaac
      181 ccaatcaaat ggtacagatg gatatcttgg taccatttta ccttgagaat tctactcatc
      241 aaaagaacta tgttattagt tgtgaagatg attgttctag gaaagtagca agtgaatggt
      301 ctgaaagaaa aaggagtata gatttattgc aagttcttga agactacatt gtagagaatg
      361 gtaaaccaga aaaggtaatg catgataatg gtaaacagtt tacatctaaa atatttagac
      421 attttctaca acgtaacaac attaaagata aacccatacc tgccagatat ccacaactac
      481 aaggaaagat tgaggcatat aacaaaatag tcaaaaatga atttcttgca atagaaaata
      541 ttcctaatat agatgatgga aagagaatgt attctatgtt tgttaaagca tacaatgaag
      601 aaagagaaca catggtggca taaatggtta tactccatct gaaatgtttc tttctaaagg
      661 aagattaaat aatcataata atgacaaaag agtcaagcag ataaaaagtg ttacccatgt
      721 tggtaagtga atctgttacc tatctatgca agtacaacaa ctaactaaca atttcatatt
      781 cgatagattt catatctttc aaaggatgat aaatttatta aaaactcgat tgccatagtt
      841 gtttaagaag ataattgcag gcaggagaga accataataa cgatacaata tatacgaaaa
      901 tatttcaaca agaagtacag gaacaacgaa accattctat agaattctaa ttgtatatag
      961 atgacgatga agatatttta ataacaatga aacaaatctt agaaaataat ggttttctag
     1021 tttccacatt tacagaccct ttcgaagcat tatccgcttt taaaccagga ttatatgatt
     1081 tggttctaat tgacgtaaaa atgccacaga tgaatggatt tgaattttac caataaataa
     1141 gaaagagaaa caaaaatata gacataaaaa aatgctttat tacaggatat gaagtttatt
     1201 atgagtcatt aaaaaaagaa tttcctgggt taaatgtagg atgttttata cgcaaacctg
     1261 tcaatgagga agaattggta gaagagataa gaaaagagtt accataggta ttgaataagt
     1321 tgtagaatca cttttcatat tgtgagtaaa taacatagta agaaatatct atttcataat
     1381 tattttacta attaaatcct tcattttctc caagtcttcc attttcccta taaaatttgc
     1441 attccgaaat acatcctgta aactgattgc atccctttcc atcataacca ccttcgccat
     1501 tatttcttcg ataccaagaa ctttgatgaa aataccattg ctgtttagat tcttgatatt
     1561 tagcttccgc acttaaaatt cttttatttt tagataggtc taaatctgaa aatgatatag
     1621 tgtttcccat gtatttacaa atataatcta cttgatatag tatagtatta actaattttt
     1681 agttttactt ctctaattta ttataatata atttagataa acaaaggtat ctttctttaa
     1741 tattgaacta gtgctaaatc tgattgtatt gaaatttcca tatcatccca ccgaacccga
     1801 tgaaaattag tctattattc tatgattatc ttacttttat ctaaataagt ttctaataat
     1861 aaaagctaaa tacatgataa gaatatatct acattagact cttatttttg taccgctatc
     1921 gatattactc ccacttggcc cataatacct aataatttta cttgttactg ttgtaattat
     1981 aaatatatta ccttagatta aacaaataaa ttaatagatt atatatataa acaaatatga
     2041 ctttacacta gtcattaata cataaggtta tatagccgag taacgtatat atatacatgt
     2101 caacaaaag
//
LOCUS       DATIAS010000203         7654 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_990276, whole genome shotgun sequence.
ACCESSION   DATIAS010000203 DATIAS010000000
VERSION     DATIAS010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7654
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990276"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            481..840
                     /locus_tag="VLA74_03955"
     CDS             481..840
                     /locus_tag="VLA74_03955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49893.1"
                     /translation="MKGNEIIQTDYALSSSQIRTSSATIPKFTTAHNLLVNKFSIEIS
                     KNKKIELTIGDRVCFVNYYQDLVCDTIVRGHLSKKYGGLESPTTVYVLVADNKLDFYK
                     IVEKAHKNSSVSRFFDI"
     gene            830..1084
                     /locus_tag="VLA74_03960"
     CDS             830..1084
                     /locus_tag="VLA74_03960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49894.1"
                     /translation="MIFDLAKDIKKYKSKLVIITGDFFLNDSYIEKEEKDWLYHQMIK
                     SIKNVTDSIIFIFSPITLPNLVNYNNNNYHYQYDSKLMDG"
     gene            1193..1804
                     /locus_tag="VLA74_03965"
     CDS             1193..1804
                     /locus_tag="VLA74_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HSF49895.1"
                     /translation="MIGISLTMFATFYYAPLKEYTSNGERIYNEQGDSARFGTSFVLG
                     ALGLLLIGLWLSRADNTLLVKFAMILAVIGQIGTGYMRHGLFFRWFTEDDIAGVQFFV
                     LILWLISIVLVLIEWRRSSKERSYYEETPYLERKPFSRYVKYEILERQQNRCAMCNDK
                     LFYPHFDHIDGNRSNNKLTNCQALCPNCHELKTRRDQRNKRNN"
     gene            complement(2106..2384)
                     /locus_tag="VLA74_03970"
     CDS             complement(2106..2384)
                     /locus_tag="VLA74_03970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49896.1"
                     /translation="MGAALKEGLNEYGSYVDKDKRISFDIPNTKEGTFTIFILDSNKK
                     NLDELLQEEIGYYRDAEMESLLEIKNKILEITDVNLSNEPAKKIIVYE"
     gene            complement(2992..3213)
                     /locus_tag="VLA74_03975"
     CDS             complement(2992..3213)
                     /locus_tag="VLA74_03975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49897.1"
                     /translation="MTNDNILTRTRTRLTECREDLNKYENLWSEYQKREPSESKNDVE
                     NTFKGIIFNFKNLLWDVEILCISHETLKD"
     gene            complement(3238..3444)
                     /locus_tag="VLA74_03980"
     CDS             complement(3238..3444)
                     /locus_tag="VLA74_03980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49898.1"
                     /translation="MQNKNLVILLYDEWWNDNNNNNIPYKLECKEVENYDKVMESYTN
                     YLIILYNLALVYKQRLKKIFYLSL"
     gene            complement(4181..4315)
                     /locus_tag="VLA74_03985"
     CDS             complement(4181..4315)
                     /locus_tag="VLA74_03985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49899.1"
                     /translation="MTRSTIPINENYYLLLTIDFEENNFDKIVMEKIIPLIKKEKEKF
                     "
     gene            complement(4364..4579)
                     /locus_tag="VLA74_03990"
     CDS             complement(4364..4579)
                     /locus_tag="VLA74_03990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49900.1"
                     /translation="MSSATNDNNFLSIFTKNVLNSHKSIRWVGIIDQNGIIINEQYRE
                     GLKPLLTKEENQESAINTIIRHKTRKK"
     gene            4736..5053
                     /locus_tag="VLA74_03995"
     CDS             4736..5053
                     /locus_tag="VLA74_03995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49901.1"
                     /translation="MLTHYTISMKFLVTTEVFETIHKEEDLKRQSELISAEIKKIMNS
                     GKLVTGGQFADRRGHFFVIDVATEVELLELLGRNILDSCKVENHPIVSFEDFFAFFQR
                     HLA"
     gene            complement(5177..5419)
                     /locus_tag="VLA74_04000"
     CDS             complement(5177..5419)
                     /locus_tag="VLA74_04000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49902.1"
                     /translation="MVSIVLHNYKTSYLNKSSFKFVDDEENKKDDNNINSIILKREID
                     KWKTYSDILRKPNKDLFNQMLQSSYKYSNSINAKGE"
     gene            complement(5641..6300)
                     /locus_tag="VLA74_04005"
     CDS             complement(5641..6300)
                     /locus_tag="VLA74_04005"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HSF49903.1"
                     /translation="MHGSTMILSGKLIFLTIRYLRMFVLKGQKCRLDAKLYPNREALS
                     INTLIISFFCGVHNNMQKIGDKIVYNTIEEIIDPSLTALVLWDVQRAFTKMIFNKEEF
                     SRNLNSIVESARKSNIPIFFTSHQMLSKRFESSANIYTLGKQGFDRLFEQFTAEDMDF
                     TIKPKQDEIVINKHTASIFIDTGFERMLKNAGIITIVFTGIATEFGVESSARDDFNRG
                     F"
     gene            6570..7055
                     /locus_tag="VLA74_04010"
     CDS             6570..7055
                     /locus_tag="VLA74_04010"
                     /inference="COORDINATES: protein motif:HMM:NF019884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSF49904.1"
                     /translation="MITKQLYEAQLQQIFHMLLENKTNEQIASELKISVRTVQNYKQR
                     LEQRYGNYQMQKTNDTLILEVQLYKNRMLTLYKALQDQVTSADDKTTGVEKAKCAEVA
                     AYIATNILKLESEELRAIKQVLTANNNGIKEGQKVLENLHQSKKGESDNIREYDPNRK
                     F"
     gene            complement(7152..7298)
                     /locus_tag="VLA74_04015"
     CDS             complement(7152..7298)
                     /locus_tag="VLA74_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49905.1"
                     /translation="MLRVLEKNPNDVPQPPNNPPQGIVSDGIQQQLQQQQLQQQQSNN
                     NLNR"
     gene            complement(7314..7481)
                     /locus_tag="VLA74_04020"
     CDS             complement(7314..7481)
                     /locus_tag="VLA74_04020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49906.1"
                     /translation="MAIQPDFAGHVNEHNDNADNNVAGEAAGDGFHQTINEYAQDHNR
                     QGGEQIKDFAT"
BASE COUNT         2722 a         1061 c         1030 g         2841 t
ORIGIN      
        1 cttctctagt tcagaattcc agttatctat aacatcaaaa ttaagtaata tctcaccacg
       61 tttaacaagt gattcattgt aatttctcca gttcacataa tatatctaga ataggctagc
      121 taaatgtgtt aggaatagtg agttgtgcaa caaggcaata taagtaaata atttgtagga
      181 tataatatag atgcataatt tacaataaat atatctgcaa ttgccgttat aattgcagca
      241 ataataatat ttttgttaaa agatattaga tctatattta gaataagatt ttctgatgga
      301 attaggttcc atcaaaggca tatgatacaa tgcatttata aatttttaac ttcttccctc
      361 ttgccttcag gaatttcata atatactaac aaatcaatta attctttcct aggatatctc
      421 tctccctctc ttcaactatc tttatagaat ttataatatt attttctttc agttaaaata
      481 ttgaaaggga acgaaataat tcaaactgat tatgctctct cttctagtca gattcgtact
      541 tcttccgcta ctatccctaa atttacaact gctcataatc ttttagttaa caagttctca
      601 attgaaatat ctaaaaataa aaaaatagag ttaactattg gagatagagt ttgttttgtt
      661 aactattatc aagatttagt ttgtgatact attgtcagag gtcatttatc taaaaaatat
      721 ggtggtttag agtctcctac tactgtatat gttctagttg cagataataa attagacttt
      781 tataaaatag tagaaaaagc ccataaaaat tcatcagtta gcagattttt tgatatttga
      841 tcttgcaaaa gatataaaaa aatacaaatc taaattggtt attataactg gagatttctt
      901 tctaaatgat tcctatatag aaaaagaaga aaaagattgg ctatatcatc aaatgattaa
      961 atcaatcaaa aatgttacag attctataat ttttatattt tctccaatta ctttacctaa
     1021 tttagtaaac tataacaaca acaactacca ttatcaatat gattctaaac taatggatgg
     1081 ataaagatat agatataatt tcaattattt acagtattta gtacaaaata atcttaaaaa
     1141 tatataaatt aatttgttat taaaattata ttgagttagt tccatagttg gtttgattgg
     1201 aatttctctt acaatgtttg ctacatttta ttatgctcct cttaaagaat atacctcaaa
     1261 tggagaaagg atttataatg aacaaggaga tagtgcaaga tttggaacat catttgtatt
     1321 aggagcatta ggtttgctac taataggatt atggctttct cgtgctgaca atacactttt
     1381 agtgaaattt gcaatgatct tggcagtaat tggacaaata ggtactgggt atatgagaca
     1441 tggacttttt tttagatggt ttactgaaga cgatatagca ggagtccaat tttttgtttt
     1501 aattttatgg ttaatatcaa tagttcttgt cttaatagaa tggcgaagat cttcaaaaga
     1561 aagaagctat tatgaagaaa caccttattt ggaacgaaaa cctttttcaa gatatgtcaa
     1621 gtatgaaatt cttgaacgtc aacaaaatag atgtgcaatg tgtaatgata aactctttta
     1681 tccacacttt gatcatattg atggaaatag atcaaataat aaacttacaa attgtcaagc
     1741 attatgtcca aattgtcatg aattaaaaac ccgaagagat cagagaaaca aacgaaataa
     1801 ttaagattct gttgttttgt gaatataata gttatagttg tagttataga atattttata
     1861 attcttcaat catcaattgt tttttttttg gtttcaatag tcaatagttc ctaaattaac
     1921 agatttaaca tgagatcttt ttattcagtt tttgggaatg tgaccgattg aattattttt
     1981 tctatagttg gaatatgatt gtcaaatgaa acagaattca ttcgatataa tattgaatac
     2041 cttttattat cgtgaagact acaaatctgc aatatttttt tatcgtcaaa cttcttgtca
     2101 agcgcttatt cataaacaat aatcttcttt gcaggttcat tagataaatt gacatcagta
     2161 atttctaaaa tcttattctt gatttccaag agagattcca tttctgcgtc tctgtaatat
     2221 cctatttcct cttggagaag ttcatcaaga tttttcttat ttgaatctaa tataaaaatg
     2281 gtaaatgttc cttcttttgt atttggaata tcaaaagata ttcttttatc tttatcaaca
     2341 tatgaaccat attcattcaa accttctttc aaagcagctc ccattcaaca ggatactgaa
     2401 attctataaa attacttttg tattctttaa attcactttg accagaaact gatactacag
     2461 cagttgtcaa gaatacaata actagcacaa acgatattat aattttcata actatcaagg
     2521 aataaaatac tttatttaat tatctttcta aatattttat gtgaaaaaat aatattgaaa
     2581 aaaataaata atatagataa ttacctaaat ttatatacac tttttgtaaa tatattaatg
     2641 aaatttaaat ccttattacg caaagtattt gaaagaaagc ccaagaaaaa agatcaaaaa
     2701 gatattccaa acataaataa ataaaatatt tttttataat aattaataaa atgcatttca
     2761 cttctctcta acctatatct cattctttga ttcgaataag gaagtctaat agacgcaaaa
     2821 gaaattataa caatatacta gttattctcg attgagatat ctaaaaaaag atacatattc
     2881 ctcttcatat ttttcttgca aatttcttaa ctcattatca agttcatttt tcataattga
     2941 attgtttgtt atgtgatgtg attggtatag gaatttttga agtatattta cttagtcttt
     3001 aagagtttca tgtgatatac aaagtatttc tacatcccat aataaatttt tgaaattaaa
     3061 gattattcct ttaaatgtat tttcaacgtc atttttggat tcacttggtt ctcttttctg
     3121 atattcactc catagatttt cgtatttatt gaggtcttct ctacattctg ttaatcgagt
     3181 ccttgtgcgt gttaatatat tatcatttgt cataactaat tttagagttt tttatattta
     3241 aagagataaa taaaaaatct tcttcagcct ttgtttatac actaaagcaa gattatagag
     3301 tataattaga taattagtat atgattccat aactttatca taattttcta cttctttaca
     3361 ttctaatttg tatggaatat tattattatt attatcattc caccattcgt cgtaaagaag
     3421 aatgactaga tttttatttt gcataaggtt gttaaagaag agtacagccc ttaaaatgta
     3481 ctagtcataa aatttgtata tctctcgtgt tttttattga gtaattagaa ctatatacta
     3541 gtaattggtt ggttcgaatc aaataaaaat tatttcatca aaaatattat cgaatttcaa
     3601 aatagaaaac aaggatttta gaaattaata aatacctcat ttatcactaa atgatttcgc
     3661 tcttcaatca attaagaggc aaaccaccaa gtcgtcgttt gttatcaata tagattagac
     3721 ctgtatatgt atctataaac cgatcactct actaatagtt cagactatga tgacaataaa
     3781 ataattaatt actctaacat tatttaaaac tctagatgaa tagttttaaa agtcataaat
     3841 agatagtata gtctttaggt attgaaaata catccactac acagaccatt ggaaaaaatt
     3901 gcaaatagtc aatagtctgg acatatctat cttgacctat aaacccaagt aatcttagtc
     3961 tgttcaggct atgacaatta atttaactcc aattattaaa tactatattt aacaagacga
     4021 atatatcaca ggcaagcata agcaattcca cactgtcata gccttctact actacactga
     4081 gtaatagtag aatggattca ttagatagag ggctatggct tttactatta ttagttttgt
     4141 tagtaaaaat actaataata ttataaatca actacaataa tcagaatttc tctttttctt
     4201 tcttaattaa aggaatgatt ttttccatta ctattttatc aaaattattt tcctcaaaat
     4261 ctatagttaa tagtaaataa taattttcat tgattggaat tgtagaccta gtcaagtttt
     4321 catatcttcc aaaagtatag gttatttttc ctatttttgc ttgttatttt tttctcgttt
     4381 tatgtctaat tattgtattg attgcagatt cttgattctc ttctttagtt agtaatggtt
     4441 ttagtccttc tctatattgt tcatttataa tgataccatt ttggtctatt ataccaaccc
     4501 atcttataga tttgtgtgaa ttcaatacat ttttagtaaa aatagagagg aaattattat
     4561 catttgttgc tgatgacatg tgtgtatatg tatttgtatt aagtcaaatt gtaataaaaa
     4621 ttaattattt ctttgtaaaa ctaactgatt tctaccagca ataggaaatt ttcaatgttc
     4681 tttcttagca aattgtgtca tattattatt attactaata cttaagaaaa tttaaatgct
     4741 tactcattat actatatcaa tgaaatttct tgtaactaca gaagtttttg aaactattca
     4801 taaagaagaa gatttaaaaa gacaatcaga attaatctcc gcagaaatta aaaaaattat
     4861 gaattcagga aaattagtta ctggaggaca attcgctgat agacgtggtc atttttttgt
     4921 aatagatgta gcaactgagg tagagttatt ggaattatta ggtagaaata tcttggattc
     4981 atgtaaagtc gagaaccatc ctatagtatc tttcgaagat tttttcgcat tcttccaaag
     5041 acatttggca taaaaattcg aatcagtctc tttgatcttc tcaatacgaa ttggggaatt
     5101 tttgtaattt ttcatttttt attttatagt gttgttcaag caatagagaa gacattatca
     5161 atgattcagt tgagaattat tcacctttag catttattga atttgaatat ttgtacgatg
     5221 attgtaacat ttgattaaac aagtctttat taggttttct caatatgtca gagtaggttt
     5281 tccatttatc tatttctctt tttaaaatta ttgagttaat attattatca tcttttttat
     5341 tctcctcatc gtcgacaaac ttaaaggaag atttgtttaa ataagaagtc ttgtaattgt
     5401 gtaaaactat tgacaccata atagggtaaa tcctaattgg gattacagaa taacaagtag
     5461 attatataat cttgcaatcg aaacatatta aggaaattag atactcctct tctagagttt
     5521 taaccaaaca ttctcaatct cttttgactt tataatggtt attaaattct tcatattttc
     5581 aatcgatctg tcatgtccat ctttatatgg cgaagacaca caatctgaaa ttactacaga
     5641 ttagaatcct ctgttgaagt catccctagc actagactct actccaaatt ctgtagcaat
     5701 acccgtaaac actatagtaa taataccagc atttttaagc atgcgctcaa agcctgtgtc
     5761 tatgaatata cttgctgtat gtttatttat tactatttca tcttgtttgg gttttattgt
     5821 aaaatccata tcttcagccg taaactgttc gaataagcgg tcaaatcctt gtttaccaag
     5881 agtatatata tttgctgaag attcaaatcg ttttgatagc atctgatgtg atgtaaagaa
     5941 tattggaatg tttgatttgc gtgccgattc tacaattgaa ttcagattcc tactaaattc
     6001 ttctttatta aaaatcattt ttgtaaatgc gcgttgcaca tcccatagca ccaatgctgt
     6061 aagcgaagga tctatgattt cttcaatagt attatagact attttatctc caatcttttg
     6121 catattatta tgcacaccac aaaagaaaga gataatcaaa gtatttatcg atagtgcttc
     6181 tctgttagga taaagttttg catctagtcg acacttctga cctttcaata caaacattcg
     6241 caaatatctt attgtaagaa agatcagttt ccctgatagg atcattgtcg aaccatgcaa
     6301 gagaccataa gaaattctct taaagaaatg agagaaaaca taggaaagat tatttttaca
     6361 gttatgaatt ttattttaca taacaactat gacatttttt cagtttattt ttcagaaaaa
     6421 tgttccagat gaaaataagg ggttttatga aatgcttgct aatcgtataa gaggaagatt
     6481 tttcctaaaa ttaaaagaag aatgtttcat aatgttgcat gtttttacaa taaaaaatca
     6541 taatgttagt cgtaggataa gaaaataaag tgataacaaa acaattgtat gaggcacaac
     6601 tgcagcaaat atttcatatg ttattggaaa ataaaacaaa tgagcagata gcctctgaac
     6661 taaaaataag tgtaaggaca gtgcagaact ataaacaacg gcttgaacaa cgttacggaa
     6721 attatcagat gcagaagaca aatgatacac taattcttga agttcaactt tacaaaaata
     6781 gaatgctaac cttatacaag gcattacaag atcaggttac ttctgctgat gataaaacga
     6841 caggtgtaga aaaagccaaa tgcgcagaag tagcagcata tattgcaaca aacattttga
     6901 agttagaaag tgaagaactt cgagcgatca agcaagtatt aacagcgaat aataacggaa
     6961 tcaaagaagg acagaaggtt ttagaaaatc ttcatcaatc taaaaaaggt gaatctgata
     7021 atattagaga atatgatccc aacagaaaat tttagttata taaataattg ttattaaaaa
     7081 agattatgta atagaaaatt actactaata aaaaaaggat taaaaatatt attaagtctt
     7141 tctttttgtt attacctatt tagattatta ttactttgct gttgttgtaa ttgctgttgt
     7201 tgtaattgct gttgaatacc atcacttact attccctgcg gaggattatt tggaggctgt
     7261 ggaacatcat ttggattctt ttcaagaacc ctaagcatag taaaatattg atctcaggtt
     7321 gcaaaatctt ttatctgttc tcctccttgt ctattatgat cttgggcata ttcatttata
     7381 gtttgatgaa acccatctcc tgctgcttca cctgcaacat tattatctgc attatcgtta
     7441 tgctcattga catgacctgc aaaatcaggt tgtatagcca tataatctcc aataattgtt
     7501 actgatggga ttacaagtat taatataaca actcaaataa aatcgatttt agtttaataa
     7561 aatacaaaca tataataagt aattctctat tttttcagat cgatttgctt aagaattata
     7621 tcaataattt tatttctaga ttaactaata atcc
//
LOCUS       DATIAS010000204         2532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_581219, whole genome shotgun sequence.
ACCESSION   DATIAS010000204 DATIAS010000000
VERSION     DATIAS010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_581219"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..803)
                     /locus_tag="VLA74_04025"
     CDS             complement(93..803)
                     /locus_tag="VLA74_04025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49907.1"
                     /translation="MKIFDDIIFISLLLIILPVLFFSFTNVSAIESIGDYVFGPDSKP
                     YGHTYGEWEAKFWQLHVNLEPDKSPASPDYKPSECLLLQDANMTFLSDFYSEIEYRNY
                     ECKISQTPIVIPALTEGCSYGEFENPNDKIIEDCIKSHNPYAVVKVTIDGKEIPDIDR
                     FRITSDWFILNVTQKDNPYDIKLGSHKAKINAIMPIIKPLPAGEHEIRTEVFQDIPSI
                     IMNDVPLHRVITYNLTVE"
     gene            complement(884..1927)
                     /locus_tag="VLA74_04030"
     CDS             complement(884..1927)
                     /locus_tag="VLA74_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49908.1"
                     /translation="MILIFEILLLERYNIYLIYSLLIITHFTAIYFSVWGTEKFLKWF
                     KSTKDKLLLVYVISFITFSVLIPLSFLYTITELQHFPETIMPGDLKRMIHAVSINLSE
                     IYPFYRISFLITFCSIWVLTAFLLYDYFGRNARLKFWAILSIPIILFLIDFFPVTLKL
                     LTSLYLLNPSLFLPLYTIPSTIATFIGAAMVSITSWLLIRKIENKGFKNYLILVTFGL
                     LLILTSTQETLFPRFLFPPFGLITILFIGLAIYLLFIGFYSASLHISRDTALVRNFAN
                     RIYQYEFFRSIAKSQLEQDIKNIIPTVLQSKEFNLQKPENLGWELRKEEIEKLFQIVR
                     RQLEDKLSDNKQL"
BASE COUNT          921 a          336 c          372 g          903 t
ORIGIN      
        1 ttcaatatac cattacttat ttcttctgtg tatgatccag tatttcaaac ctattttagt
       61 caatatcaaa cctaattagt tctatctaaa ttttattcga cagttaagtt ataggttatg
      121 acacgatgta atggaacatc attcataatt atggatggaa tatcttggaa tacttctgtc
      181 cttatttcat gttcaccagc aggtaatggt tttatgatag gcattatagc atttattttt
      241 gctttatgag acccaagttt tatatcatac ggattatctt tttgtgtaac atttaaaata
      301 aaccaatctg atgtaatcct gaatctatca atatctggta tttcttttcc gtcgatggtt
      361 acttttacga ctgcatatgg gttatgtgac ttaatacaat cctctatgat cttatcattt
      421 ggattttcaa attctccata actacagcct tcagttaatg caggaattac aattggagtt
      481 tgagaaattt tacattcata attacggtat tctatttcac tgtaaaaatc agaaagaaac
      541 gtcatatttg catcctgtaa taatagacac tcactaggtt tgtaatcagg agaagcaggg
      601 gatttgtctg gttcaagatt aacatgtaat tgccaaaatt ttgcttccca ttctccatat
      661 gtgtgaccat aaggtttaga gtctggtcca aatacgtaat cacctatcga ttctattgct
      721 gagacatttg taaatgaaaa aaacaagaca ggaagaataa tcaaaagtaa agatatgaat
      781 attatgtcat caaatatttt catgtatcat ctatatttta tttttgatat taagtttttc
      841 tctttttagg gcaaagtaaa agtttcagtt aatactgcaa tcatcatagt tgtttattat
      901 ctgataattt atcttctaat tgtctcctaa caatttgaaa gagtttttct atttcttctt
      961 ttcttagttc ccatcctagg ttttcgggtt tctgtagatt aaattcttta ctttgtaaga
     1021 cagtaggtat tatatttttg atatcttgtt ctaattgtga ttttgcaata cttctaaaaa
     1081 attcatattg ataaattcta ttagcaaaat ttctaactaa agccgtatct ctactaatat
     1141 gaagtgatgc agaatagaat cctataaaaa gtaaataaat agccaatcca ataaagagaa
     1201 ttgtaataag tccaaatgga ggaaagagaa aacgaggaaa tagagtttct tgagtagatg
     1261 taagaataag taatagtcca aatgtgacta atatcaaata atttttaaat cctttatttt
     1321 ctatttttct tattagtaac catgatgtta tactaaccat agccgcacca ataaaggtag
     1381 caatggtgga aggtatcgta taaagaggta gaaagagaga tggatttaat agatataaac
     1441 ttgtcaaaag ttttaatgta accggaaaaa aatctattaa gaaaagtatg ataggaatag
     1501 ataaaatagc ccaaaatttt aagcgagcgt ttctcccaaa ataatcatat aatagaaaag
     1561 cagttaaaac ccatatagaa caaaaagtta ttaaaaagga tattctataa aaggggtata
     1621 tttcagatag attgattgat actgcatgga tcattctttt taagtctcca ggcattattg
     1681 tttcagggaa gtgctggagt tctgtaatag tatacaagaa agatagtgga attaagacgg
     1741 aaaaagttat aaatgatata acatatacta ataataattt atctttggta gacttaaacc
     1801 attttaagaa tttttctgtg ccccagacac taaaataaat agcagtaaaa tgtgtgataa
     1861 ttagaagcga ataaatcaga tatatgttat acctttctaa taataatatt tcaaatatga
     1921 gaatcataat caatatactt actgtgatta gatacaaaac gatgaaactt tgtaaaactt
     1981 ttattctggt tcctaaaata ctataattct ctgaaaatat attttttatt gtaaatatta
     2041 acaaaaaatt aatcacgata aaaatagtta caaaaattag gaaaacgtct ataagatagc
     2101 ttttatttgc aggtagatga aatgcttcac taagattcac aaaggaagaa tcaaaatata
     2161 caagtaaggc taacgtaata aaaataaaaa tatatttttg ggaaagtaaa ttaacaatat
     2221 tacttaattt agcaaacggt gaccaaacca atatttaata taatttaaaa gactatatgg
     2281 attttactcg tcttgcatat tgatagtgag gtgttgttat tacaaataaa gttcatttga
     2341 tattttccct ttcttgttct ccttattttt gtctttcttt ggtcaatttg catgttttta
     2401 tattaatttt cagattcttt tattaataac aattaataaa catgaatact cataccaaat
     2461 atgactcatc atattgcaaa aataaccgaa cttgttggta gttcagataa gggatggcaa
     2521 gaggcagcca aa
//
LOCUS       DATIAS010000205         2809 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1399758, whole genome shotgun sequence.
ACCESSION   DATIAS010000205 DATIAS010000000
VERSION     DATIAS010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1399758"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VLA74_04035"
     CDS             <1..247
                     /locus_tag="VLA74_04035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49909.1"
                     /translation="YEATKLVIDKQQQSEYQEFLDKQQEQQQQQQIKQEDKITAEFKQ
                     QIHDDDGQENSRNYDDDDDDGYEKEYNNNNNNSNAKF"
     gene            396..899
                     /locus_tag="VLA74_04040"
     CDS             396..899
                     /locus_tag="VLA74_04040"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49910.1"
                     /translation="MAQITKQQYEAQLQHIFRLLLDGKTDEEIAKDLNISVRSVQRYR
                     RRLERRYGAFQAAKTDSTLFLECSLFKNRLLKMYRILEQKALDPKTSGTETAKCAEVA
                     ANIAIDILKLESEGIKAVKNGLVSIAAATAHKNALNNLRNDNDDDTINNNYHQEQEEQ
                     ENDNRKF"
     gene            complement(1036..1266)
                     /locus_tag="VLA74_04045"
     CDS             complement(1036..1266)
                     /locus_tag="VLA74_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSF49911.1"
                     /translation="MPNAFVLLSTELGREEDIIKDLKNFEEVKEVFRVYGVYDIIAKV
                     ESDTMDKVKGIITWKLRKLTGVKSTLTLIVMK"
     gene            complement(1446..1751)
                     /locus_tag="VLA74_04050"
     CDS             complement(1446..1751)
                     /locus_tag="VLA74_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49912.1"
                     /translation="MEANSQGGRDVLTVRGGTGNYLVGDANEMYDSRGDFDRITATGD
                     YNTLTGDANFMSNSIGSADILTLTGSGSTLYGEADFMSNSQGGRDTLTATAVIINPF"
     gene            1844..2230
                     /locus_tag="VLA74_04055"
     CDS             1844..2230
                     /locus_tag="VLA74_04055"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HSF49913.1"
                     /translation="MAKLIEMDDRITIKDQLEEEIDGQVILINKFNVNPDKVEQFLKD
                     WKEDANRFIQQPGFVSAQLHKGIGKSSVFINYAVWDSIENFKNAINKLILNPQTQSPL
                     LKYDDDSLVISPHLFKKVEVHGICGG"
     gene            2468..>2809
                     /locus_tag="VLA74_04060"
     CDS             2468..>2809
                     /locus_tag="VLA74_04060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49914.1"
                     /translation="MKENRLSQIDYYPLSTTSTRLTTSNIPNFITAQKLLEDKFSIEI
                     SKKDKKKRLELAIGDKVCFVKPPSDLICDTIVRGLLPKKFGGLESTNVYVLVADNKLE
                     FYKIVEKAHKKY"
BASE COUNT         1100 a          395 c          414 g          900 t
ORIGIN      
        1 ttatgaggct actaaattag taatagataa acaacaacaa tctgaatatc aggaatttct
       61 ggataaacag caggaacaac aacaacaaca gcaaatcaag caagaagaca aaatcaccgc
      121 tgaatttaaa caacaaatac atgatgatga tggacaagaa aattcaagaa attatgacga
      181 tgatgatgat gatggttatg aaaaggagta taataataat aataataaca gtaatgcaaa
      241 attctaaatt tagtaatatt attttttatt taccaatcaa tatgtagata tatgaatttg
      301 tgtatatata tgtcgtttat tgtcatgttt ttcgaattaa taaataataa taataatatg
      361 ataagaccac caataatagg gagaaaatta ttagaatggc tcaaataact aaacagcaat
      421 atgaagcaca gttacagcat atatttcgtt tgttgctaga tggaaagact gatgaagaaa
      481 tagcaaaaga tttgaatatt tctgttcgct cggtgcaaag ataccgacgt cggttagagc
      541 gaaggtatgg agcatttcaa gcggccaaaa cagacagtac actttttctt gaatgttcac
      601 ttttcaagaa ccgtctttta aaaatgtata ggatattgga acaaaaggct ttagatccta
      661 aaactagtgg aaccgagaca gcaaagtgtg ctgaagtagc agcaaatatc gctatagata
      721 ttttgaaatt ggaaagcgaa gggataaagg cagttaaaaa tggtttagta tcaatagcag
      781 cagcaacagc acataaaaat gctcttaaca atttaagaaa cgacaatgat gatgatacta
      841 ttaataataa ttatcatcaa gagcaggaag aacaagaaaa tgacaacagg aaattttgat
      901 ccactataga ttaataaaaa aatttaattg atttatatta aataatcatt tatactaatt
      961 acagataatc gtatctatct tctagaagta taatatccta ataaataatc ataaagataa
     1021 aaatacttta aaaccttatt tcattacgat caaagtaaga gtagatttta ctcctgttaa
     1081 ttttcttaat ttccatgtaa ttattccttt aactttatcc atagtatcag attctacttt
     1141 tgctataatg tcataaacgc cataaactcg aaaaacttct ttaacctctt caaaattttt
     1201 taaatctttt attatatctt cttctcttcc caattctgta cttaataata caaaagcatt
     1261 aggcatggaa ttttataaaa aattgcatat aaaaatatga tgatcaaaaa aaacagaaaa
     1321 atatgaatcc tcaagtatac cttatgaatt cgaatcccat tcatctttta tcataaatat
     1381 ttaaaaataa tatttaatga taaagaatgg atttattgct tgtccatgga tgaaaatgaa
     1441 ttatatcaaa aaggattgat aataactgca gttgctgtta gagtatcacg accaccttgg
     1501 gaattagaca tgaaatcagc ctcgccgtat aaagtgctac cactaccagt tagagttaga
     1561 atatcagcac tacctatgga attagacata aaatttgcat caccagtcag agtgttataa
     1621 tcaccagttg ccgttattct atcaaaatca cctcgggaat catacatttc gttagcatcg
     1681 cccaccaaat aattaccagt tccacctctt acagttagaa catcacgacc accttgggaa
     1741 ttagcctcca tagtcaaagc gtcaccatac agattgttag agttgttttt attattattt
     1801 tgaataagaa atcctttagt ctattagatg ttaacttata attatggcaa aattaattga
     1861 aatggatgac agaataacaa ttaaagatca gttagaagaa gaaatagatg gtcaagtaat
     1921 tctaataaat aaattcaatg taaatccaga taaagttgaa cagtttttaa aggattggaa
     1981 ggaagatgct aatcgcttta ttcaacaacc tggatttgtt tctgcacaat tacataaagg
     2041 cattggcaaa agttctgtat tcattaatta tgctgtttgg gactcgatag aaaattttaa
     2101 gaatgcaatt aataaattaa ttttaaatcc ccaaacacaa tcaccgcttt taaaatacga
     2161 tgatgatagt ttagtaattt caccacattt attcaagaag gtagaagttc atggaatatg
     2221 tggagggtaa aagtattaac aagaattaac ggaaactatt ctactgagta gaattatact
     2281 tgctaactgg tccaaaaaaa aatttctcta ttatttatta ggttttaaga tggattagtt
     2341 gtcattgcag taattgtctg taaggtgaaa atagttttta acttgattta actagtaaaa
     2401 gtattatctc tccctctctc aaactgtcta tattgaattt ataatactat tctttctatt
     2461 attatgattg aaagagaata gattaagtca aattgattat tatcctcttt ctactacttc
     2521 aactagatta actacttcga atattccaaa ctttataaca gcacaaaagt tattagaaga
     2581 caagttttca attgaaatat ctaaaaaaga caaaaagaaa agactagaat tagcaatagg
     2641 cgataaagtt tgttttgtta aacctccttc tgatttaatt tgtgatacta ttgtaagagg
     2701 tcttttacct aaaaaatttg gtggtttaga atctacaaat gtatatgttc tagttgcaga
     2761 taataaatta gaattttata aaatagtaga aaaagcccat aaaaaatac
//
LOCUS       DATIAS010000206         3015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1808012, whole genome shotgun sequence.
ACCESSION   DATIAS010000206 DATIAS010000000
VERSION     DATIAS010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808012"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            588..1463
                     /locus_tag="VLA74_04065"
     CDS             588..1463
                     /locus_tag="VLA74_04065"
                     /inference="COORDINATES: protein motif:HMM:NF013341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIO1 family regulatory kinase/ATPase"
                     /protein_id="HSF49915.1"
                     /translation="MSSLKESANIVRNLGNLEYRILKIFVSSIKHHEIINNQEIVSYS
                     NLHKDRIEYGLNNLLKLKLIAKTEKGFKLVTAGLDVYALKILVDSEIISGIGNPLGIG
                     KESDVVKAVSELDQDRAVKFFRIGRISFTDTKRKRSIEKRRNIHNWLLINIEAAKREY
                     DFLVKLKETKMNISTPYFRSMHSIVMYRINGVRLVDYKHLPNPKEILKKTFEQIKLAY
                     KENIINGDLSEYNIILDENNEIWIIDWPQAVTLDHPNADFLIKRDIQNVIRFFKRKYD
                     LQIDENYYIEYILQK"
     gene            complement(1526..2668)
                     /gene="metK"
                     /locus_tag="VLA74_04070"
     CDS             complement(1526..2668)
                     /gene="metK"
                     /locus_tag="VLA74_04070"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HSF49916.1"
                     /translation="MVSKYLFSSESVTEGHPDKICDQISDSILDEYLIQDLNSRVAIE
                     SLTTTGTVFVAGEVTSKGSIDVQDIVRNTIREIGYDRADLGFDCNSCAVLTSIHEQSD
                     DISLGVTATDVKDQGAGDQGLVFGFATHETPEFMPLPIIMAHKLCMKLSEVRKRKELD
                     WVRPDGKSQVSVVYEDSIPKRIDTVVLSSQHSPDIELDQLREELIKKVIRPTCGEWID
                     SLTRFIINPTGRFVLGGPSADTGLTGRKIIIDTYGGMGRHGGGAFSGKDPSKVDRSAC
                     YMARYIAKNIVAAELARKCEVQIAYAIGMAEPVSVMVDTFGTGKIEQEEIENRVKKNF
                     DMRPSRIIETLLLKKPIYKKTAAYGHFGRNDPSFTWEKIDKAYLLK"
     gene            complement(2699..>3015)
                     /locus_tag="VLA74_04075"
     CDS             complement(2699..>3015)
                     /locus_tag="VLA74_04075"
                     /inference="COORDINATES: protein motif:HMM:NF013582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0000398 - mRNA splicing, via spliceosome
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="U6 snRNA-associated Sm-like protein LSm6"
                     /protein_id="HSF49917.1"
                     /translation="IKEPFYSAVCEIELQSDILTLSANSSSQQPKRPLTMLQKSLNQR
                     VAVRLKSEIEYKGIMSNVDSYMNLILVNAEEYLGPNVLANYGKVVIRGNNVLFIRLIK
                     DL"
BASE COUNT         1108 a          459 c          424 g         1024 t
ORIGIN      
        1 aaagtgtgat aactatatat gagtaatcaa atgatttttc aaagacgatt aactacaaga
       61 tatgaaaaga tataacaaca ataacaataa tatcaatatc gataaaaagt aataataata
      121 aatatgcggg tgttatacag aggctacaat atataacacc catctaatcc ttccatccat
      181 gtaaaatgac aacaacagcg ttaacgagac tttactaact tgatatgtgt gtctgacata
      241 tatcgaggtt tgtgtatatg tatgtgtaat gtagtagtag tatgtaatag taaaagcaag
      301 taaaataaaa aattgttgct tttagaaata aaaacaataa taataataat aataaaaata
      361 attacattta atttccagaa aagtaaaata gatttggaca attaattttt ttctctagga
      421 aatacccatg tgaattgcag catttatttt attaattaat aatcctgttt actgatatac
      481 ctaaataata attcttaaat aatcaataaa caaaatcttc aatggtcctc caaatattta
      541 ataaatagga acatatatta ttaatagtta aagcttgtga atttgatttg tcttcattaa
      601 aagaatctgc aaatatagtt agaaatttgg gaaacttaga atacagaatt ctaaaaatat
      661 ttgtttcttc tataaagcat catgaaataa taaataatca agaaattgta tcttattcta
      721 atttacataa agataggata gaatatggct taaataattt attaaaatta aaattaatag
      781 caaaaacgga aaaaggcttt aaattggtta cggcaggttt agacgtttat gcattaaaaa
      841 tattggtaga ttccgaaata atatctggaa taggcaatcc tctaggaatt ggcaaggaat
      901 cagatgtagt aaaagcagta tctgaattag accaagatag agctgttaag ttttttagaa
      961 taggtaggat aagttttaca gatactaaaa gaaaaagatc tattgaaaaa agaagaaata
     1021 ttcacaattg gttattgata aatattgaag ctgccaaaag agaatatgat tttttagtta
     1081 aattaaaaga aacaaaaatg aatatttcta ctccttattt cagatctatg cattcaatag
     1141 taatgtatag aataaatggg gttaggttag tcgactataa acatttacca aatcctaaag
     1201 agattcttaa aaaaacattt gaacagataa aactagcata taaagaaaat attattaatg
     1261 gtgatttaag tgaatataac attattctag acgagaataa tgaaatttgg ataattgatt
     1321 ggcctcaagc agtcactttg gatcatccaa atgcagactt tcttattaaa cgcgatatcc
     1381 agaacgtaat tagatttttt aaaagaaaat atgatttaca gatagatgaa aattattata
     1441 tagaatacat cttgcaaaaa taatataact agattgttta aataaaatga gaattggata
     1501 taaaaaatga gtttaataaa ttaaattatt ttaacaaata ggccttgtcg attttttccc
     1561 aagtaaagga aggatcattc cttccaaaat gtccataggc tgcagtcttt ttataaatag
     1621 gtttttttaa caacaaagtt tcaattatcc gtgacggacg catatcaaag ttttttttaa
     1681 ctctattctc tatttcttct tgttctattt tgcctgtacc aaaagtatct accataacag
     1741 aaacaggttc agccattcct atagcatatg ctatttgaac ttcacatttt ctggctagtt
     1801 ctgctgctac tatatttttt gcaatatatc gtgccatata gcatgcagat cgatctacct
     1861 ttgatggatc ttttccagaa aatgcacctc caccgtgtcg tcccatacca ccataagtat
     1921 ctataattat cttcctacct gtaagtccgg tgtcagcaga aggaccaccc aaaacaaacc
     1981 ttccagtcgg attaattata aatcttgtta gactatcaat ccattctccg caggtaggtc
     2041 taataacttt ctttataagc tcttctctta attggtcaag ctcaatatct ggtgaatgtt
     2101 gtgaagatag tacaacagtg tctatccttt taggaataga atcttcataa acaacagaaa
     2161 cttgtgattt accatctggt ctaacccaat ctaattcctt tctttttctt acctcactta
     2221 gtttcataca gagtttgtga gccataataa taggtaatgg catgaattca ggggtttcat
     2281 gtgttgcaaa tccaaacact aatccttgat ctcctgcgcc ttgatctttt acatctgtag
     2341 cagttactcc taaagaaata tcatcgctct gttcatggat agaggtaaga actgcacagc
     2401 tattacaatc aaatcctaaa tctgctcgat catatccaat ttctcttata gtattcctaa
     2461 ctatgtcttg aacatctatt gatccttttg atgtaacctc tcctgcaaca aaaacagttc
     2521 cagtagttgt taatgattcg attgctactc tagaatttag atcttgaatc aaatattcgt
     2581 ctaatattga atctgatatt tgatcgcaaa tcttatcagg atgaccttct gttacacttt
     2641 cagagctaaa taaatatttt gaaaccattt ctaaaagaga aatctttaac ttgaatattt
     2701 ataaatcttt aataagccta ataaagagaa cgttatttcc tctaataact actttaccat
     2761 agtttgccag cacatttggg cctaaatatt cttcagcatt aacaagaata agattcatgt
     2821 atgaatcaac attactcata attcctttgt attcaatttc actctttaat ctcactgcta
     2881 ccctctgatt tagggatttt tgtaacatag ttaaaggtct ttttggttgt tgagaactcg
     2941 aattagctga caatgtcaat atatcacttt gcaattcaat ttcacataca gcagaataaa
     3001 aaggttcctt tatgg
//
LOCUS       DATIAS010000207         4178 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_581570, whole genome shotgun sequence.
ACCESSION   DATIAS010000207 DATIAS010000000
VERSION     DATIAS010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4178
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_581570"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VLA74_04080"
     CDS             <1..188
                     /locus_tag="VLA74_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49918.1"
                     /translation="DEWLAKVDSEPCIEVIVGLATSVPINITITNNIDILSLPATSKL
                     DKNFLPLSARAFQKQIF"
     gene            complement(414..836)
                     /locus_tag="VLA74_04085"
     CDS             complement(414..836)
                     /locus_tag="VLA74_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49919.1"
                     /translation="MTQHRPTGITIISVLMIIGGIILLFTGITPLFLGPLISIESSSD
                     YQISELGLLITIGGLTLVGLGIASFIVSWGLLKGKGWARTITLIISIIAIIVAIISLV
                     SSGDLVHVISVIIYGIIIYYMFTNKVKLFFGKVKESTT"
     gene            complement(1244..2665)
                     /locus_tag="VLA74_04090"
     CDS             complement(1244..2665)
                     /locus_tag="VLA74_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49920.1"
                     /translation="MTITTEEDNNDFSNENQTTDYTSLEGLRTRLGIDNDRLFGNFIV
                     KELIDNALDFIEKNAKKFQELKQNKDKNPYVNVTITEEEIENKKVNKIIVRNSIIDND
                     IFPKNVIKSIFNLEKYYSSKRHQHIIKRGALGDGLKEMLCIPYAFAIETNDDYSWNYP
                     LIFNISNKRLIEVRIVNLSQVRKNLESPSITIMPKELSIEEDQTNNKFTEIVVYLPNV
                     AVDYDKIKSLLYRYIILNTHIDFHFELPNNSYYKPTYKATQNITEWSNYQSIYHYSLQ
                     DFERLIYSLQDRSNSNIANYVQKYFREGTNIKKDELLDILNSKNNPITNKNNNNNKNI
                     EGIYHRLKQIPAKGPQSDNKRQVPFDLKLRENALKKRLGKIYQIEDDSFVYKKINGYY
                     YGPNNNNEIEFPYILEIIIANIPNTHKKLYFYPSINFSPTLRYNPFENRSDEDIFSWK
                     NKKKNNSQTKVGSSIIDILYHLS"
     gene            complement(2782..2916)
                     /locus_tag="VLA74_04095"
     CDS             complement(2782..2916)
                     /locus_tag="VLA74_04095"
                     /inference="COORDINATES: protein motif:HMM:NF014723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin VapB family protein"
                     /protein_id="HSF49921.1"
                     /translation="MNKLKHITVNQEVYQKLKNLGKTGDSFNDVLIRILAEAEKEKEE
                     "
     gene            3218..>4178
                     /locus_tag="VLA74_04100"
     CDS             3218..>4178
                     /locus_tag="VLA74_04100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49922.1"
                     /translation="MDEINNINNFIENNNISLDYFYYKGYEIVSKYNNQSKFKLRLAT
                     IKIITSHFQDRFPTTEYLYLVGGNGSGKSSLAETFRALAYKTVVMTDPSAPNLFRLLG
                     VVEPVQCTMVLEEADKIDKITELMAVLKTGYSYYGSVPKINPYTLKQEFFFSYCPKII
                     VSERSLNQAIAKGVNSRTFPINCIKGSTKHDIKEVLNPTNTGGLENKKLLQEIMQFRK
                     LLLVYRLRHFKDPIPDLDIGVEGRDKELVKHSIQLFYGCKCLEEVKETLQEFLDRKNE
                     KKESSIESIVLSIVANLVKYNGLEISSKSIWNELIEEIPGTLNE"
BASE COUNT         1464 a          570 c          583 g         1561 t
ORIGIN      
        1 gtgatgaatg gttagcaaaa gtagactcag aaccatgtat agaggttata gttggactcg
       61 ctacgagtgt tccaattaat ataactatta caaataatat agatattctt tctttaccag
      121 ccacaagtaa attagataaa aattttcttc ctctttctgc cagagctttc caaaaacaga
      181 tattttaaac tcaattctaa atatatagaa acaaagttgt acaataattc tttgtttctt
      241 tctgaaccct tatgcaaatt tatcactata caaggtgagc actagaaacc tgcgggcccg
      301 tcgggagtaa taccgatagc ggtgcaaaaa taagagtcta aaatagagat actactatct
      361 gctatttagc ttttattatt tagaatcata ttgtaaattg tttttaaaat aaattaggta
      421 gttgattctt taaccttacc aaaaaacagt tttactttgt ttgtaaacat atagtaaatt
      481 attataccat aaattattac tgaaataaca tgtactaaat caccactact tacaagagaa
      541 ataatcgcaa ctattattgc aattatgctg attatgagtg taattgtacg agcccatcct
      601 ttccctttta aaagacccca tgaaacaatg aaactggcta tccctagtcc cactaatgtc
      661 aaaccaccta ttgtaataag taatcctaat tcactaattt gataatcaga agaagactct
      721 atactaatta gaggacctaa aaataaagga gtaattccag taaataaaag tattattcca
      781 ccaattatca taagaactga tatgatagta attccagttg gacgatgttg agtcacatat
      841 caattaaatt ttagttgaat ttaagtatta tgtaattaat acaattaatt ctatcaaaag
      901 atattattat tactaaaatt ggatgaaatt ttctattcct agtattacta ctttatagat
      961 ttttcataga gagcatataa aagttagtac aaatattatg ataggatata gtttggatat
     1021 tattataatg aaatagacaa atagacaaac agaaagcttc ttatgatagt atttgctaca
     1081 gggtaatgag atttatgaca gcaaagttgt caatttttat tgctattgta tcagcaatat
     1141 caacttcaat gattagtttc tcaatattat accacttagc aaatgtattc tgacatacta
     1201 tgaatatttt tctccatatt tttaaagatt attgtaagcg tatttatgat aagtggtata
     1261 gaatatcaat aatagaactt cctacttttg tttggctatt attcttcttt ttgtttttcc
     1321 aggaaaatat atcttcatca gatcgatttt caaagggatt atatcttaat gttggtgaga
     1381 aatttattga tggataaaaa tataattttt tatgagtatt aggtatgtta gcaataataa
     1441 tttctaatat atatggaaat tcgatttcgt tattattgtt aggtccataa taatagccat
     1501 taattttttt gtaaacaaaa ctgtcatctt caatttgata tatttttcca agacgttttt
     1561 ttaatgcatt ttctctaagt tttaaatcaa atggaacttg tcgtttattg tctgactgag
     1621 gtccttttgc aggtatttgt tttaatctat gataaattcc ttctatattt ttattattat
     1681 tgttgttctt attggtaata ggattatttt tagaatttaa tatatccaat aattcatcct
     1741 tttttatatt agtaccttct cggaaatatt tttgaacata gttagcaata ttagaattag
     1801 acctatcctg taaactgtag attaatcttt caaaatcttg caacgaataa tgataaatac
     1861 tttggtagtt actccactct gttatatttt gtgtggcttt ataggttggt ttataataac
     1921 tattatttgg tagttcaaaa tgaaaatcga tatgagtatt taatataata tatctatata
     1981 aaagagattt tattttatca taatcaactg ctacatttgg aagataaaca acaatttcag
     2041 tgaatttgtt atttgtttga tcctcctcta ttgataattc tttaggcatt attgttatag
     2101 atggagattc taagtttttt ctaacttgac taaggttaac gattctaact tcaatcaatc
     2161 ttttattaga aatattaaat attaatggat aattccaact ataatcatca ttagtctcaa
     2221 tagcaaaagc ataaggaata catagcatct cttttaaacc atctcctaat gctccccgtt
     2281 ttataatgtg ttgatgtctt ttgctactgt aatatttttc aagattaaag atacttttaa
     2341 tgacattttt cggaaatata tcattatcaa taatagaatt tctaactata attttattta
     2401 ctttcttatt ttcaatttct tcttctgtaa tggttacatt aacatatgga tttttatctt
     2461 tattttgttt taattcttga aattttttgg catttttttc aataaaatct aatgcattat
     2521 ctatcaattc cttgactatg aaattgccaa aaagtcggtc gttatcaatt cctagtctgg
     2581 tcctaagtcc ctcaagtgaa gtataatctg ttgtctgatt ttcgtttgaa aaatcattat
     2641 tatcttcttc tgttgttatt gtcattttat tcgtcaacac acacgttaac taattattaa
     2701 tccttcttag aaaagagaga ggggataggt ttttaagagt tttgtagcca tgactggaaa
     2761 agtataaaat tctgaccccc ctcattcctc cttttccttt tctgcttctg ctaaaattct
     2821 gattaagaca tcattaaaag aatctcctgt cttgcctaga ttcttcaatt tttgataaac
     2881 ctcttggttt accgtaatat gttttaactt attcataagt ttaatattat attttaagta
     2941 atttaagatg tgggtattaa tattatgtaa aagaacccac taataattta aatgatgtaa
     3001 atatttgtca aatatatgta atgtgactat taattagtta aagattatta tacaaagaaa
     3061 tattattgtt tttgttaatg gaacattacc agtttttata acttataatg ataaaacaaa
     3121 ttcatttgaa gcaattgaac aaatagaaga aactaccagg cttctaactc ctcctactct
     3181 cgaagaatgt ccatatttac tatatgaatt tgaaagtatg gatgaaatca acaatatcaa
     3241 caactttatt gaaaataaca atattagttt agattatttt tactataagg gttatgaaat
     3301 cgtttccaaa tataataatc aatcaaaatt caaattaaga ctagcaacca taaaaataat
     3361 aacttctcat tttcaggata gatttccaac taccgaatat ttgtatttag ttggtggcaa
     3421 tggaagtggt aagagttcat tggctgaaac tttcagagca cttgcataca aaacagtagt
     3481 aatgacagat cccagtgcac ctaacttatt tagattatta ggagttgtgg aacctgtcca
     3541 atgtactatg gttttagagg aagccgataa aatcgataag ataactgagt taatggcagt
     3601 tttaaaaact ggctactctt attatggatc ggttcctaag ataaatcctt atactcttaa
     3661 acaggaattt ttctttagtt attgtccaaa aattattgta tctgaaagat cactaaatca
     3721 ggctattgct aagggtgtta attccagaac atttccaatt aattgtatca agggaagtac
     3781 aaaacatgat attaaggaag ttttgaatcc aactaataca ggtggacttg aaaataaaaa
     3841 actattgcaa gaaataatgc aatttagaaa attgttgttg gtttacagac ttagacactt
     3901 taaagatcca attccagatc ttgatattgg agtagaagga agagataaag aacttgtaaa
     3961 acattcgatc cagttatttt atggatgcaa atgtttggag gaagtaaaag aaactttaca
     4021 ggaattttta gatagaaaga acgaaaagaa agaatcgtct attgaatcca tagtattatc
     4081 aatagttgca aacttggtta aatacaatgg ccttgaaata tcttctaaaa gtatctggaa
     4141 tgaattgata gaagaaattc ctggcacatt gaacgaaa
//
LOCUS       DATIAS010000208         4819 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_990943, whole genome shotgun sequence.
ACCESSION   DATIAS010000208 DATIAS010000000
VERSION     DATIAS010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4819
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990943"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VLA74_04105"
     CDS             complement(<1..306)
                     /locus_tag="VLA74_04105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49923.1"
                     /translation="MNLDKTIKELTNRLDIVYPSSSISNEIQHDGINYWKGKKIISAK
                     KWNEIYEKNSIYTDNYRIILISRKPLQYFPDDYNGSISVSEVREDEKLKEEIQNWNTD
                     "
     gene            complement(303..773)
                     /locus_tag="VLA74_04110"
     CDS             complement(303..773)
                     /locus_tag="VLA74_04110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF49924.1"
                     /translation="MTIYQQNSNIDYEFDNNNNSRKSKFLIEERRRWVAKLWAQSKTE
                     TEIAGELHCNVSTICRDIKFLKKLSQQFVFDLAKDLGFYYKSCIDTMDQIQQKCWAIF
                     NNDNISQKDKLLALKIIKETCESKFSLIEKGPSVMALNSLQERVEKIESSSASK"
     gene            1588..1929
                     /locus_tag="VLA74_04115"
     CDS             1588..1929
                     /locus_tag="VLA74_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49925.1"
                     /translation="MEDLKKKSIIKISEDLRNALKDLGKKGESYEDVLWKLVHNKDRR
                     HGDLYNIEELKKIDEELIDETLEYFNCNLQDLESELDINNEEIHTEEIRSILKGMEYL
                     CDDIDDLKQEN"
     gene            complement(2051..3328)
                     /locus_tag="VLA74_04120"
     CDS             complement(2051..3328)
                     /locus_tag="VLA74_04120"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HSF49926.1"
                     /translation="MTIIEETYPTIQIKDIIINDRHRKDFGNLEELARNIEEVGLLHP
                     ITLDQHNRLIDGERRLLSYEYLGKTEIPYFRINIDEIVLGEFSANSYRKDWTVSEIVA
                     IKRTLEPYFKQQARQRQLIDKPLGNVSKGRALDKIGKMLGKDRKTISKMEYIVKRKDR
                     NPEKYQKLLNDIDSKKSSVDKVFKIMEKDEKREELLKSESNNLELPENCKLLLGDFRR
                     VPNNQIADNSIDLIFTDPPYADTPENLSLYEDLARLAIRTLKPGSSLVFYVGHIILHK
                     VIQIFSKYSPDNNDSGLKFWWMFAVKHNGNHNKIFPRHIFSEYKPLLWYVKGNKINDL
                     LIANTIGDYIESTPPSKVEHDWQQSATEAEYILKNLTIENQTVLDPMMGSGTTGLAAL
                     NLRRKFIGIEKNLETFEIAKIRINKQPKYSIYS"
     gene            4014..>4819
                     /locus_tag="VLA74_04125"
     CDS             4014..>4819
                     /locus_tag="VLA74_04125"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HSF49927.1"
                     /translation="MKIFVSYSRKYGKIFADHIHEYFTALGEDVFTDTKNIRAGFNWN
                     KELNDSILSSDIFVIICTPHSLRSPEVQKEVEIAKNADKRIIPCVFTEVVDIIDLKWN
                     LNDYQGVKFVDEQQLGWRLYKIIKLETDGRVKEEPTDRVEPEIVDTSSSRKSPSIPFQ
                     SAEWFIERGEKFENLEDYDNAIKMYDKAIEKESDNFSIYLKKSLLLGKILNYEKALQV
                     LDDAIIIQPDHSDVWYYKGFFLEKLGKDEAALKVLERDLRIDPKDIITRK"
BASE COUNT         1621 a          685 c          687 g         1826 t
ORIGIN      
        1 atcagtattc caattttgaa tctcttcctt taacttttca tcttctctaa cttctgatac
       61 agatattgaa ccattgtaat catctggaaa gtattgtaat ggttttcttg atattagaat
      121 aattctgtag ttatctgtat agattgagtt tttttcataa atttcattcc atttttttgc
      181 tgatattatt tttttgcctt tccaataatt aattccatca tgttggatct cattactaat
      241 agaagaagat ggataaacaa tatctagacg atttgttagt tctttaatag ttttatctag
      301 attcatttgc tagctgatga tgattcaatt ttttcaactc tttcctgtaa tgaatttaga
      361 gccattactg agggaccctt ctctatcaaa gagaatttgg attcacatgt ttctttaatt
      421 atttttaatg ctagaagttt gtctttttga gatatattat cattattaaa aatagcccaa
      481 catttctgtt gtatctgatc catggtatca atacaacttt tgtaataaaa tcctagatcc
      541 ttagctaaat caaatacaaa ctgttgtgat agtttcttta aaaatttaat atctctacaa
      601 atagtagaaa cattacagtg tagttctcca gctatctctg tttctgtttt tgactgagcc
      661 cataatttgg ctacccatcg tctcctttct tcaataagaa attttgattt cctactatta
      721 ttattgttat caaattcata atcaatatta gaattttgct gatatatggt caattattgc
      781 attattatat atgcaattga aacttttata tttttacttt aataaaaaaa ttaagatagt
      841 ccaatagaga atttttagtt ataaatttag ttgaattaat gatcttcata aatctatcta
      901 gagtgatatt tatcatattt atatacgtta ccaaaataga agaaataata taacttttca
      961 ttatcaacag tagtagcagc aacaatttgt atctttgatt tttcagatga ttcaggatta
     1021 atacctgtaa aaacttaatt gtgagcatta atttccatat tagaatcatc aattgatgct
     1081 aacggtaatg atttctgatt aattggtagt agtttgctat atgtatccat taaagttccc
     1141 aatctaatac tatattctac aacgtatagg tacttacatt ttttgcttct gtttgaacct
     1201 caatccatgc aacttcttca ccagctacta ttattgatag aatccttctg cagaatagta
     1261 gtaggttctt attgaaactt cacgtaataa tatctactgt gtggtgccgt acttgattac
     1321 acataaaaaa cacgtcgata ttaaccagtc tgtaaacaga gtgtgagatt gttgcaagtc
     1381 tccgaccctt gcactcacgt tttacccgtt cctcttcatt tattattcta gaaataattt
     1441 gtttcatatt ttgtaatatg ttattacttc tatctattat ataatgatta cattatgtta
     1501 tatgttgtta tatattgtta tatattatta tacgttacta tttaactaca taatatttat
     1561 attaggaagc ataaatataa tagagatatg gaagatttga agaaaaagtc aatcattaag
     1621 atatctgaag acctacgcaa tgcattgaag gatttaggta aaaaaggaga aagttatgaa
     1681 gatgttctat ggaaacttgt acacaacaaa gataggagac atggagatct ttataatatt
     1741 gaagaattaa agaagatcga tgaggaatta atagatgaga ctttagagta ttttaactgc
     1801 aatttacagg acttggaatc tgaactggat ataaataatg aagaaatcca taccgaagag
     1861 ataaggagca ttttaaaagg gatggaatat ttatgcgatg atattgatga cttaaaacaa
     1921 gaaaattaag aaataattaa ttttaaaata tctcaatata aaataatttt gctcttattt
     1981 ctgaatattt cagttactat ataattaaca aagaatttcc agaattttgt cttttattct
     2041 attattatta ttatgaataa atagaatatt ttggttgttt atttattctt attttagcaa
     2101 tctcaaatgt ttctaaattt ttctctattc ctataaattt ccttcttaga ttaagtgcag
     2161 ctagtccagt agttccagaa cccatcattg gatctaatac tgtttgattt tcaattgtga
     2221 gattttttaa tatgtattct gcttctgttg cagattgttg ccaatcatgt tctacctttg
     2281 agggaggagt agattcaata tagtcaccta tagtatttgc aattaacaaa tcattaattt
     2341 tatttccttt gacgtaccat aacaaaggtt tgtattctga gaatatgtgt ctaggaaata
     2401 ttttattatg attcccgtta tgtttaacgg caaacatcca ccaaaacttt aaaccactat
     2461 cattattatc tggagaatat ttactgaaaa tttgtattac tttatgtaaa ataatatggc
     2521 ctacgtaaaa aactaaacta gaaccaggtt ttagtgttct tatagctaat ctcgctaagt
     2581 cttcatacag tgatagattc tctggagtgt cagcgtatgg aggatcagtg aatattaaat
     2641 caatagagtt atccgctatc tgattgttgg gtactcgtct aaaatctcca agcaatagtt
     2701 tacagttttc aggtaattct aaattgttag attcagattt caataattct tctctttttt
     2761 catccttctc cattatttta aacaccttat ctacacttga ctttttagaa tctatatcgt
     2821 tcagtaattt ttgatatttc tctggattcc gatctttacg ttttacaata tactccattt
     2881 ttgaaattgt tttcctatcc tttcctaaca tttttccaat tttgtccaat gcacgacctt
     2941 tggagacatt ccccaaaggt ttatctatta actgtctctg tcttgcctgc tgtttaaagt
     3001 agggttctaa ggttcttttg attgcaacaa tttccgaaac tgtccaatcc tttctgtagg
     3061 aatttgcaga gaattcacct aatactattt cgtctatgtt tattctaaaa taaggaatct
     3121 ctgttttgcc aagatactca tacgataaaa gtcgtctttc tccatctatt agtctgttat
     3181 gctggtccag ggttatcggg tgtaataatc ctacttcttc aatgtttctt gcaagttctt
     3241 cgagatttcc gaaatccttt ctatgtctgt catttattat aatatctttt atctggattg
     3301 ttggataagt ctcttctatt atagtcattt gctaattctc aattactgtt attatatgta
     3361 cttggaagct ttatgtttta ctctaacttg ttgagatata atttatttta atctctagtt
     3421 ttatataaaa tatcaattta ttcacataaa ttattatatg ttactattta gctcccttca
     3481 ttaatgtgtt agataagaaa ataaaaatta gatgaggaaa ttagattaag aaaatatcta
     3541 gaattctaat caaaatattt tctctatata cttctaaaat cgtttactca tgtgacgctt
     3601 ttcacctcga aattgtcata agctgaaaca aaatttacca tcagagacag atttgaagaa
     3661 taataacatt ctttgatgta aaatcagatt tctagtttga gaaccttgat tatagcattg
     3721 atattcgagg agttagaaat catataataa taaaaaataa tccctctctt agtccaatat
     3781 cttttcagcg tgtgacactc acatgataag ggaattcttt atgtatagag tgattaagta
     3841 actctaatct aatttatcaa tagctataga tttaatggta aaagagcatt tatattattt
     3901 attaatttta aaactttttc ggcgtctcaa aattttgata ttttcaacta tcataaaact
     3961 atttagaaaa gaaataaact ttaatacttt ttccttaaat ttaaatatca aaagtgaaaa
     4021 tattcgtatc ttattcaaga aagtatggaa agatctttgc agaccatatc cacgaatatt
     4081 ttactgcctt aggtgaagat gttttcacag ataccaaaaa tattagagca ggttttaatt
     4141 ggaataagga attaaatgat agtattttaa gtagtgatat ttttgtaata atatgtacac
     4201 ctcattcttt aagaagtcca gaagttcaaa aggaagttga aatagcaaaa aatgcagaca
     4261 aaagaatcat accttgcgta ttcaccgagg tagtagatat cattgattta aaatggaatt
     4321 taaacgatta tcagggagtt aaatttgtcg atgaacaaca attaggatgg agactttaca
     4381 agattataaa gttagaaact gatggtcgag tgaaagaaga gcctactgat agagtagaac
     4441 cggaaattgt tgacacaagt agcagcagaa agtcaccatc aattcccttt caatcagctg
     4501 aatggtttat agaaagaggt gaaaaatttg aaaatttaga agactatgac aatgcaatca
     4561 aaatgtatga taaggctata gaaaaagaga gcgataattt ttctatctat cttaaaaaat
     4621 ctctattatt aggtaaaatt ttgaattatg agaaagctct ccaggtatta gatgatgcaa
     4681 ttattattca accagatcat tctgatgtat ggtattacaa aggctttttt ctcgaaaaac
     4741 ttggaaaaga tgaagctgct ctaaaggtat tagaacgaga tttaagaata gatccaaaag
     4801 acattataac tagaaaatt
//
LOCUS       DATIAS010000209         2228 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1127318, whole genome shotgun sequence.
ACCESSION   DATIAS010000209 DATIAS010000000
VERSION     DATIAS010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1127318"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VLA74_04130"
     CDS             <1..235
                     /locus_tag="VLA74_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49928.1"
                     /translation="YFENKKYESGTNLCMKILNYADFKGGEGKLDNFLIINDLKLLSK
                     DQRFRNMLQQIKHNFDNNYYKFENLYLTGYPVE"
     gene            complement(270..1601)
                     /locus_tag="VLA74_04135"
     CDS             complement(270..1601)
                     /locus_tag="VLA74_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49929.1"
                     /translation="MPLKLSTTIGKIQNIPNFKNIEIVNEFLEYMRSNGSSEHHQNNN
                     LKVVIAFSNFISKDISFYDINKKEQVLEFLNTKVKSYDEDPDKRWITTWNNYLNRLRL
                     FYRWLYNHDNNTDHENWQTPEFIKIKNKKSKRVSPYLESEIWEKDELLSIIKYEPYKR
                     NKAALTLFWDLNGRNHEITILKLKHIRFREKYAEGEVPHEAKTGSGPILLTTSFPYVR
                     DWINEHPFRNTPDAYLICNIMTGAPVKPDAMWTMMNQLKIRIVKMLQEGSIKDIKEKE
                     KLEYLIKTKKWNPYCLRHSSISSDSDFLPEYALKKKVRWSMNSKQGIRYIKRRIGDDL
                     KNQILVRNGIISENEIKKKPSIHLCPRCEFVNSIEHKLCSSCSYPLTPSAFEEMKSEE
                     DRKLKILEEKHSQEIRSIREEMNNQFNQLISMIQQNPLLANVKPDKLKNKL"
     gene            complement(1962..>2228)
                     /locus_tag="VLA74_04140"
     CDS             complement(1962..>2228)
                     /locus_tag="VLA74_04140"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSF49930.1"
                     /translation="KDAVMYGFTNGELLGGPIKNLYDFVEKNGTAPDIKTRLDVLAIT
                     PTTAVVRIDIEKDAIDTNYMDFHTLIKIDGTWYIIAKVYHMYEG"
BASE COUNT          659 a          343 c          343 g          883 t
ORIGIN      
        1 ctattttgag aataaaaaat atgaaagtgg tactaattta tgtatgaaga tcttaaacta
       61 tgcagatttt aaaggtggag aaggcaagtt agacaatttt ctaattatta atgatttaaa
      121 attgttatct aaagatcaaa gatttaggaa tatgttacag caaataaaac ataactttga
      181 taataattat tataaatttg agaatttgta tttaactgga tatcctgtag aatagaataa
      241 tttgattgat tttcgtaaat attgcatatt tataatttat tcttcagctt atctggtttt
      301 acatttgcta ataatggatt ttgttggatc atcgaaatca gttggttaaa ttgattgttc
      361 atttcttctc ttattgatct aatttcttgt gaatgttttt cttctagtat ttttaatttc
      421 ctgtcttcct ctgatttcat ttcttcaaat gcagatggag taagtggata agaacagcta
      481 gaacatagtt tgtgttcaat tgaattgaca aattcacatc ttggacatag atggattgag
      541 ggcttctttt taatttcatt ttctgaaatt attccatttc ttacaagtat ttgatttttg
      601 aggtcatctc caattcttcg tttgatatat cttattcctt gttttgaatt catagaccat
      661 cttacttttt tctttaatgc atattcaggt aaaaaatccg agtcgctaga aatagaggaa
      721 tgacgtagac aataaggatt ccattttttt gtctttatca aatattcaag tttctccttt
      781 tctttaatat ctttaatgga tccttcttgt aacattttta caattctaat ttttaattga
      841 ttcatcatag tccacattgc atctggttta acaggtgcac cagtcattat attgcatatt
      901 agataagcat ctggagtatt tctaaaagga tgttcattta tccaatctct tacataagga
      961 aaactcgttg ttaatagtat tggtccacta cctgttttag cttcatgtgg aacttcgcct
     1021 tcagcgtatt tttctctaaa tctaatatgt tttaatttta gaatggtaat ttcatggttt
     1081 ctgccattta gatcccaaaa taatgttaga gctgccttat tccttttata tggttcatat
     1141 tttataattg ataataattc atctttttcc caaatttcac tttctaaata tggtgaaact
     1201 cttttacttt ttttgttctt tattttgata aattctggag tttgccaatt ttcatgatca
     1261 gtattattat catgattgta tagccatcta taaaacagcc ttagtctgtt aagatagtta
     1321 ttccatgttg ttatccatct cttatcagga tcttcatcat aacttttaac tttggtatta
     1381 agaaattcta aaacctgttc tttcttgttg atatcataaa atgaaatgtc tttacttata
     1441 aaattgctaa atgctattac aacttttaaa ttgttatttt gatgatgttc agaagaacca
     1501 ttacttctca tatattcaag aaattcattt actatctcta tattcttgaa attaggaata
     1561 ttttgtattt ttcctattgt tgtagatagt tttagtggca tttatccttc tttgctcctt
     1621 cttttacaaa atctaatatc aaattcaaag tatatgaacc cacttataga atggggccag
     1681 tggttcccgt tgtgatattg gtactaaaaa tggacccata atctataaaa agaaagaatt
     1741 aattaagtgt tactaaaaga atttctatat taaaattgaa tatattttgt tttaaacttt
     1801 ttaaattatt tttaattact ttatagtttg gagcgaatac taatctcata tctaataaat
     1861 agagaatccc tttaagtaat gggatcaagc agatgtgaat cctaataaac aatgacaata
     1921 aatatacttg gttatgctgc accttctgcc aaggccggcc tttacccttc gtacatgtga
     1981 taaaccttgg cgatgatgta ccaggtgcca tcgatcttga tgagcgtgtg gaagtccatg
     2041 tagttggtgt cgatcgcgtc cttctcgatg tcgatgcgta ccaccgcagt cgttggcgtg
     2101 atcgcgagca cgtcaagccg cgtcttgatg tcaggcgcgg tgccgttctt ctcaacaaag
     2161 tcgtagaggt tcttgattgg gccaccgagc aactcaccat tggtgaagcc gtacattacg
     2221 gcgtcctt
//
LOCUS       DATIAS010000210         3350 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1400430, whole genome shotgun sequence.
ACCESSION   DATIAS010000210 DATIAS010000000
VERSION     DATIAS010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3350
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1400430"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            653..913
                     /locus_tag="VLA74_04145"
     CDS             653..913
                     /locus_tag="VLA74_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF49931.1"
                     /translation="MANRSRTEIVCNILDAANGGASKTKIMYIAFVSYNQLKEYLSIL
                     IEYNLIEYIDGDHTFKTTEKGLNFLKMHNEMGELLQNTIENN"
     gene            complement(1659..2783)
                     /locus_tag="VLA74_04150"
     CDS             complement(1659..2783)
                     /locus_tag="VLA74_04150"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HSF49932.1"
                     /translation="MVIIQSNLDRTFVYANLDRTFVYVSNGGDGNIAVMKLNPETGDM
                     KLVEKEPAGKNVMHMTLSPDHRFLYASVRSEPFSVISYSINSETGNLTHLSKEPLPEN
                     MAYISVDQTGRFLLSASYTGAKIAVNPIDLKGSVQAEPVQVIPTGPNPHSILVDPSNR
                     FVYVPHLGNDQIKQFLFNESTGALTPNDPDVVYTKDGSGPRHFDFSPNNKFVYVSNEM
                     DGTVYSYEMNNKTGTLTEIQRISVFPPQIYLEPSTNVAGYGAQGMTNGEATAIKVADI
                     HVTPDGKWLYVSERATNTITAFSVDRHLGNLTYIGSYDTEKMPRGINIDPKGNFVIVA
                     GQKSDHVSVHAINPETGELKLLDRYDSGKDPNWIEIVEFN"
     gene            3150..3290
                     /locus_tag="VLA74_04155"
     CDS             3150..3290
                     /locus_tag="VLA74_04155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49933.1"
                     /translation="MRSNIKKKVRIFLENELLVENKLISFLYDNYNSDPIIVENMKMI
                     MT"
BASE COUNT         1239 a          492 c          509 g         1110 t
ORIGIN      
        1 gaaaaggaga tggaaaaaga ggaaaaggag atggaaaaag aggaaaagga gatggaaaaa
       61 gaggaaaagg agatggaaaa agaggaaaag gagatggcga agacccaaaa ggaaagtgaa
      121 aaggagatgg aaaaagagga aaatgaaaga gaaaaagaat agacatgaaa ttaatttttt
      181 taaatttgta tcgaaataac atattatact ttcatctaat ttgaattacc tgttatacct
      241 cattatctga aaagttaatg ttaaaaaatc taaaacaaaa gatataaaat aattatatta
      301 ctcttgcaga tagaatttct tgcgaggcat aaaatatctt ttaaataatt cgatctaatt
      361 tttgtatcgt aataaattat atgcatcgac attattactt ttatttgcat aggtgaaatt
      421 ccaacgtttt agaagtatgc ataaactact tactcattta aaaataaaaa tgaatagaat
      481 gaattgttga caaaattaaa taggataact attttataat acaattttga gctaacacat
      541 aaaaatttgt tatatttttt tatttgaaaa taatatgtgg aatgtttttc tgtaattagc
      601 ttaccttttc atgtgacgtt atactaatat aagtaaaata cttactaata atatggcaaa
      661 tagaagcaga acagaaatag tttgtaatat acttgatgct gcaaatggag gagcatccaa
      721 gacaaaaatt atgtacatag cttttgtaag ttataatcaa ttaaaagagt atctttctat
      781 tttgatagaa tacaatctaa tagaatatat tgatggggat cacacattta agaccacaga
      841 aaaaggatta aactttctta aaatgcataa cgaaatggga gaactattac aaaatacaat
      901 cgaaaataac taattaattt tataacctga aaaaagttaa caactgaatg gtcttcaata
      961 gttggtgact aatcagtaac caactgtaac atagattata tagcacttgt taatacgata
     1021 ttatagtttc acattcattg atatgttgtg cttcagtatg ggatcacatt tgatggtgat
     1081 tcacttcacc actgactttt tattttgcag cgctataagg gaatcaataa cgtttcaaaa
     1141 aaattatttc aatcaccttt gacctttttt tgttatgcca acgattttta atacaataag
     1201 taatttttaa atattatatt attgattact gcaacattag attcttattt ttgcaccgct
     1261 atcagtatta ctgcagatgg ttatgtgcct gtccacaggt ctgtatatcc atttcttata
     1321 gggtctatta ccattcctgt ctttcccaac tcacttagta attctattta ttgatgttgt
     1381 attatctgaa gttacatcat attttaatat ctttttatct acatcataaa gacgatttta
     1441 caattcaact atcacaatat cttctataat ccgcagcaat attctaatgt ttattccgac
     1501 tatactgatt acatttaatt gaaccttaga tgatttgatt ttctaaaaat atatatctat
     1561 tacaaatatt catgaaaatg gaaaaaataa acatagttaa ggtacatttg tgttgggcgg
     1621 aactaacaaa aatcgcaaat tcgatattct ttgatttttt aattaaattc aacaatttca
     1681 atccagtttg gatctttacc tgaatcatac cgatccaaga gttttaattc accagtttct
     1741 ggattgatgg catgtaccga tacatgatct gatttctgtc ctgctacaat tacaaaatta
     1801 cccttaggat caatgttaat accacgtggc attttttcag tatcgtaact tccaatgtaa
     1861 gtcaaattac ccaagtgacg gtcaacagaa aatgcggtaa ttgtgttggt agctctttca
     1921 cttacgtata accatttgcc atcaggtgtt acgtgaatat ctgcaacttt aatagcagta
     1981 gcttccccat ttgtcatacc ttgggcacca tatccagcta cattagttga cggttcaagg
     2041 tatatctgag gggggaatac tgaaattctc tgaatttccg ttaaagtccc tgtcttgtta
     2101 ttcatctcat aagaataaac cgtaccatcc atttcatttg atacataaac aaacttgtta
     2161 tttggtgaaa aatcaaaatg ccgtggccca gaaccatctt tagtgtatac aacatcagga
     2221 tcatttggtg taagagctcc agtggattca ttaaacaaaa attgttttat ctgatcattt
     2281 cctaaatgag gaacataaac aaatcggttc gatggatcaa ctaaaattga atggggattt
     2341 ggtcctgtgg gaattacctg tacaggttct gcctggacgg aacctttcag gtctattgga
     2401 tttaccgcaa tttttgcacc agtataggat gctgataaaa gaaaacgtcc ggtttgatct
     2461 actgagatat atgccatgtt ttctggtaat ggttctttag aaagatgagt tagatttcca
     2521 gtctcagaat taatcgaata agaaattacg gaaaaaggtt ctgaacgaac agaggcataa
     2581 aggaaccgat gatctggact caatgtcata tgcattacat ttttccctgc aggttccttt
     2641 tccaccaatt tcatatcacc tgtttcaggg tttaacttca tgactgcaat atttccgtca
     2701 ccaccattag aaacatacac aaacgttcta tctaaattag catacacaaa cgttctatct
     2761 aaattagact gaattatgac cataaataaa attggaatta taaacacacc cacaaaaatt
     2821 cgaagcatga aactatgcag tgttttttgt tattattaat ttatctatat gctattgtca
     2881 atagaaatta tagattgaac caacttttct aaatcatttg aaataaagat taatcaaaaa
     2941 aaattcatgt aaatagaaaa cattttgtat tctattctaa tagccgtttc gatatctata
     3001 ataacaatga ctaaaatcct tatctattag aaaaataaaa cacttaacaa aaatgataag
     3061 aaagcaaatt atttatttct aacaaaatca gaatttgaat aactcaatag aaaaggagaa
     3121 caatctattt caaaaaactt tgagtataga tgagatcaaa tattaaaaag aaggttcgta
     3181 tattcttaga aaatgagtta cttgtagaaa ataagttgat ttccttttta tatgacaatt
     3241 acaatagtga tcccattatt gtagaaaata tgaaaatgat aatgacttag taaggaaaag
     3301 gtcgcgggat tgaatcccac tcaagtctgt aattcaaaaa ataaaaatat
//
LOCUS       DATIAS010000211         2380 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1535198, whole genome shotgun sequence.
ACCESSION   DATIAS010000211 DATIAS010000000
VERSION     DATIAS010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1535198"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VLA74_04160"
     CDS             <1..295
                     /locus_tag="VLA74_04160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49934.1"
                     /translation="YHIEFDVIDEITHADVSPVKKKFIERFDLGLGTCIVKNVEDIVE
                     TNNTVIYNCAPDTTSIGRIHDKTLWNFDVKGTYDSAKENLKISGKFTGVGKGY"
     gene            548..1093
                     /locus_tag="VLA74_04165"
     CDS             548..1093
                     /locus_tag="VLA74_04165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49935.1"
                     /translation="MVNIDTTTSLESFRQFIIVSTCKSFIPDSYLRDFEVFPEREEGP
                     GAIYIEAVDKVTLKRIREMTFVNAKDVLGIIYSSKSGNTQLKWRQIRRKTGKVSGAAS
                     ANALVNLVESGVLTQEWVNDYLESAKNITKKNKSSNKKEKTNYSSESEISTNRDDSQP
                     SSSVSSSASSSSPSITSSSNQ"
     gene            1167..2240
                     /locus_tag="VLA74_04170"
     CDS             1167..2240
                     /locus_tag="VLA74_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA surveillance protein Pelota"
                     /protein_id="HSF49936.1"
                     /translation="MISKEVKGSSGKAILVIPEDSDDLFVLRRVVKLGDTVISDTTRV
                     IKFDKEFSRPDRERVKIRVSIRVEKINLDETIDRLRISGIITESNNSLVGKGTYHSVL
                     VQIGNSLVIEKNKKWDELEINLLKSDVAGTFILVAIDTKEAGIAKITGTHLQIIPNIY
                     SGQSGKYYSQNVRNNPNIEIFFDEIVNAFVNLIYEDGKFKIIIFGPGETKRKFLNYIH
                     SKKPNFKDISSVIDGVDVAGEDGVLVFIRSPTIKEVMSSSKISIVSNILDQIMIQVNK
                     GEQKYAMGFKEVSEAVKLKSVESLIFSNSVFKDSKEDDIINLLNSAETLGAKVYAVDS
                     STDIGWRVSALGGIVAILRYQIR"
BASE COUNT          846 a          328 c          436 g          770 t
ORIGIN      
        1 ttatcatatt gaatttgatg taatcgatga aataacacat gcagatgtta gtcctgttaa
       61 gaaaaaattt atagaaagat ttgatcttgg tttaggtaca tgtattgtga agaacgttga
      121 agacattgta gaaacaaata atacagtaat ttataattgt gctcccgata ctacgtccat
      181 tggtagaatt catgataaga cattgtggaa ttttgatgta aaaggaacct atgactctgc
      241 aaaagagaac ttgaaaataa gtggaaagtt tactggagta ggaaaaggat actaacaatg
      301 ggtttctttg ggctgaatta agcctttaga atagaagaaa aatatattta ttctcgtgac
      361 tctatattat ttataaaaac caaagtgtgt taaattctat ttaattttgt ttttttgtat
      421 atatacttac aattattttt tctcgccctt aaagattaaa tagaatcctc agatagtata
      481 tatgataaaa attgtatcgc aaatatatat taaaaaagcc attatactgt atggagagtc
      541 aatcatattg gttaatatag atactactac atcacttgaa agttttagac agtttattat
      601 tgtaagtacg tgcaaatcgt tcattcccga tagttatcta cgtgattttg aggtttttcc
      661 agaacgtgaa gagggacctg gtgccatata tatcgaggca gtcgataaag ttactttaaa
      721 aagaatccgt gaaatgacct ttgtaaatgc aaaggacgta ttaggaataa tctactcatc
      781 taaaagtggt aatactcagc taaaatggag acagataagg agaaagacag gtaaagtatc
      841 tggggcagct tccgctaacg cattggttaa ccttgtcgaa tctggtgtgc tgactcagga
      901 gtgggtcaac gactatttgg aatctgcaaa gaatattaca aagaaaaata aaagtagtaa
      961 taaaaaagag aaaactaatt acagttctga aagtgaaatt tctacaaaca gagatgattc
     1021 acaaccctcg tcatcggtat cgtcatcagc ctcatcatca tcgccgtcga taacgtcttc
     1081 ttcaaaccaa tgatctgttg ttattgtatt attatcaagt caaatgacag gtaacaaatg
     1141 atattatctg ccttttttaa agcactatga tcagtaaaga agtaaagggt tcttcaggca
     1201 aggcaatact ggtgatccca gaggattctg acgacctctt tgttttaaga cgggtggtta
     1261 aacttgggga tactgtaatc tcggatacta ctagagttat aaaatttgat aaagaatttt
     1321 ctagaccaga tagggagaga gttaaaattc gtgtatctat aagagtagaa aaaatcaatc
     1381 tggatgaaac tattgacagg ctacgtatat ctggtattat tacagaatca aacaacagtc
     1441 ttgttggcaa gggaacatat cattctgtac tagtacagat tggaaattca cttgtaattg
     1501 aaaaaaataa gaaatgggat gaactagaaa ttaatttact aaagtcagat gttgctggta
     1561 cattcatcct agttgcgatc gatacaaaag aagccggaat tgcaaagatt acaggcacgc
     1621 atttacaaat aattccaaat atatattcag gacagagtgg gaaatattat tcccagaatg
     1681 tcagaaacaa tcccaatata gaaattttct tcgacgaaat agtaaatgct tttgtaaatc
     1741 taatctatga agacggaaaa tttaaaataa taatattcgg tccaggagag acgaaaagaa
     1801 aatttctaaa ttatatccat agtaaaaaac ccaactttaa agatatttcc tcagtaattg
     1861 atggtgttga tgttgctggt gaagatggag ttcttgtatt tatcagatcg cccacaataa
     1921 aggaagtgat gagctccagt aagatttcga ttgtatctaa tatcttggac caaattatga
     1981 ttcaggttaa taaaggagag caaaaatatg ctatgggttt taaggaagtt tctgaagcag
     2041 tgaaattaaa gtctgtcgaa tctctaattt tttccaattc tgtctttaag gattcaaaag
     2101 aagatgatat aataaatctt ttaaatagtg ctgaaacact cggagcaaaa gtttacgctg
     2161 ttgattcatc cactgacata ggatggcgtg tttctgctct tggaggtatt gtagccattc
     2221 ttcgttacca gatccgctag attcaagaaa aaagaaagaa agatgtagac atagtgattc
     2281 atttaatata attttatttt tacttttatt tttattaata tttttatttt ttttatctcc
     2341 tcttcttttg tttactttat taaaaaaatt ttattttttg
//
LOCUS       DATIAS010000212         3867 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1671797, whole genome shotgun sequence.
ACCESSION   DATIAS010000212 DATIAS010000000
VERSION     DATIAS010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3867
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1671797"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..736
                     /locus_tag="VLA74_04175"
     CDS             167..736
                     /locus_tag="VLA74_04175"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HSF49937.1"
                     /translation="MRIYTKTGDNGYTGLIGGQRIPKNDPRIICYGSVDELNSYVGLC
                     ISILLQRQNSAFFFKDLIELLTSLQNDLFVMGSDLADPDLKKPSSIRVKKEMIDNLEN
                     KIDMYESELDPITFFILPGGSVESAHLQIARSITRRAETNVSKLLSTSAETVNNLILV
                     YLNRFSDLLFVIARLINKRLGVSDVAWKS"
     gene            777..971
                     /locus_tag="VLA74_04180"
     CDS             777..971
                     /locus_tag="VLA74_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49938.1"
                     /translation="MGQIRNVAIIIVITVVMGIITLLLAHVFDIFLKPLMMSLFSSDL
                     IMISYIIQSSDYLGILHFNE"
     gene            1004..1657
                     /locus_tag="VLA74_04185"
     CDS             1004..1657
                     /locus_tag="VLA74_04185"
                     /inference="COORDINATES: protein motif:HMM:NF024423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSF49939.1"
                     /translation="MYTPNHVKDDNRIIDISNSVSNNESHDVDIDTFIQSIFRLKKIK
                     RTGWLAKGKILNGESIADHSYSLSALCMVFSDILGLDTEKVMKMCIIHDLAESIIGDI
                     MPGEIADKEKKMKENKVMKSILFSLPVSVRIDYFGIWKEFLLNGSKEAQLVHKVDKLE
                     MLLQAREYLLQGYSIRYLEQFFKSIEKYCNQEDNPSLYGILGISNTLKNLKYSLDKK"
     gene            1680..1991
                     /locus_tag="VLA74_04190"
     CDS             1680..1991
                     /locus_tag="VLA74_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49940.1"
                     /translation="MALKLGEKRVKQARDLLEIYTGNAMPALALKDAKLNDWSPVGEE
                     NLVAVVQESNGYMIVLCDSNGIAKTIAQWFSEEDKNNIILKIKEEQNLQEYFGKLSLP
                     I"
     gene            2032..3267
                     /locus_tag="VLA74_04195"
     CDS             2032..3267
                     /locus_tag="VLA74_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00300 family protein"
                     /protein_id="HSF49941.1"
                     /translation="MAKKIEQEIEVKGHLIDSMILTNIFDKIMDLKADFKVIEFNVGR
                     KKTSPSYARLVISGKDQKHLDEILEAVYREGAQPITTKDVLLEPSPSNMVMPDLFYST
                     TNKPTQIYYGGKWIDVKNIMMDKCIVVDTQKNIAECKMIRDIKEGDLVVVKERGIRII
                     PEERPRQGVDIFQFMSSSSSSERPTQHIIKKVANDIYEVKQKKGKIVVVGGPVIVHSG
                     SSQSLAKLISMGYIDGLLAGNALAVHDIENALLGTSLGMNIDDGTLAVRGHRNHMQAI
                     NEVFKYRSIKKMVEKGSLTKGIMYECIKNNIPYALSGSIRDDGPIPDVITDIVEAQRK
                     YKEILKDVKMVIMLSSMLHSIAVGNMLPSYVKVIAVDINQSVVTKLLDRGTTQAIGIV
                     TDVGVFLPMILQHLKDFSR"
     gene            complement(3352..>3867)
                     /locus_tag="VLA74_04200"
     CDS             complement(3352..>3867)
                     /locus_tag="VLA74_04200"
                     /inference="COORDINATES: protein motif:HMM:NF014674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HSF49942.1"
                     /translation="FGLSEHVSQILIDNKELGDLFESAVNIYHSPVSISNWIVSDILA
                     FADYDSSGKKSLENMKINANHIAEIAKLVDNNKINRTTAKNIIGKIIKTGELPSKLIN
                     EKEVTIITDEQILNETINKIFEEGKNAVVDTKKNSNAINFLLGKVMMATRGRADPKIT
                     MKLIKQKLEQI"
BASE COUNT         1387 a          521 c          679 g         1280 t
ORIGIN      
        1 aaatgtgata aatgcaatga aaggttcaag aaaaaaaaat accttcgaga acacaaggca
       61 gaggtacatt catactaagt ctttataatc aacattgtca tatacttgta ttccataatt
      121 gagtatagat aatatttatt gctataacag gattttatta tgatatatga ggatttatac
      181 aaagacaggt gataatggat atactggtct tataggtggc caaagaatac caaagaatga
      241 tccaagaata atatgttatg gaagtgttga tgagcttaat tcttatgtcg gattatgtat
      301 ttcaattttg ctacaaagac aaaattcggc attttttttc aaagatctga tagaattact
      361 tacctcatta cagaatgatc tctttgttat gggatccgac cttgctgatc ctgacttgaa
      421 aaaaccatct tctattaggg taaaaaaaga gatgatagat aatttagaaa ataaaatcga
      481 catgtatgaa agtgaacttg atccgataac gttttttata ttaccaggcg gttctgtaga
      541 atcagcacat cttcaaattg cgaggagtat tactaggaga gcagaaacga acgtttcaaa
      601 attactttct acttcagctg aaacagtgaa taatttgata cttgtctatt taaacagatt
      661 ctctgatttg ttgtttgtca tagctagatt gataaataaa agattaggtg tatccgatgt
      721 tgcatggaaa tcttaatata attaagaaat ctacaatcag gaagtagtgt ctttaaatgg
      781 gacaaatacg aaatgttgct ataataatag taattaccgt ggtaatggga attattacac
      841 tattactagc gcatgttttt gacatctttc taaaaccgtt gatgatgtct ctcttttcat
      901 cagatttaat aatgatatcc tatatcattc agtcaagtga ttatcttggt atattacact
      961 ttaatgaata aaagataaaa cccatgtttt tttcttatat tgtatgtata cgccaaatca
     1021 tgttaaagat gataatagaa ttattgatat tagtaatagt gtaagtaaca acgaatccca
     1081 tgatgtagac attgatactt ttattcaatc catttttaga ttaaagaaaa taaaaagaac
     1141 aggatggctt gcgaaaggaa aaatacttaa tggagaatct attgctgatc atagctattc
     1201 cttatctgca ctctgtatgg ttttttctga tattttaggt ctggatactg aaaaagtaat
     1261 gaagatgtgt ataatacacg atctggccga atcaataata ggtgatatta tgccaggtga
     1321 aattgctgat aaggaaaaaa agatgaagga aaataaagtt atgaaatcca tattgttttc
     1381 acttcctgtt tccgtcagga tagattactt tggaatatgg aaagaattct tgttaaatgg
     1441 atcaaaagag gctcaattag ttcataaagt ggataagtta gaaatgttgt tacaggcaag
     1501 agagtatttg cttcagggtt attcaatcag atatttagaa caattcttca aatctataga
     1561 aaaatattgt aatcaggaag ataatccgtc attatacggg attttaggta tttcaaatac
     1621 gttgaaaaat ttaaaatact ctttagataa aaaatagtat atataaaatg caatatttta
     1681 tggcgttaaa acttggagag aaaagagtta aacaggcacg agatcttcta gaaatctata
     1741 caggaaatgc aatgccagct cttgccctaa aagatgctaa attaaacgac tggtcccccg
     1801 taggagaaga aaatcttgtt gcagtggttc aagaatcgaa tggatatatg atagtgttat
     1861 gtgatagtaa cgggatagca aaaactattg cacaatggtt ttcagaagaa gataaaaata
     1921 atattatttt aaaaataaaa gaagagcaga atttacagga atattttgga aaattatctt
     1981 tgcctatata attaaccctt aagtacccat tactgtatct aacaatgtaa tttggcgaaa
     2041 aaaatagaac aggaaataga agttaaaggt cacttgattg attcaatgat cctgactaat
     2101 attttcgata agatcatgga tctaaaagct gatttcaaag ttattgaatt taacgtcggt
     2161 agaaagaaaa catctcctag ttacgctaga ttagtaataa gcggaaagga ccaaaagcac
     2221 ctagatgaga tattagaagc tgtttataga gaaggtgctc aaccaattac tacaaaagat
     2281 gttttattgg aaccgtctcc atcgaatatg gttatgccag atttatttta tagtactact
     2341 aataaaccaa cacagattta ttatggtgga aaatggatcg atgtcaaaaa tattatgatg
     2401 gataagtgta tagttgttga cacacaaaaa aatattgctg aatgtaaaat gataagagac
     2461 ataaaagaag gagatcttgt agtagtaaag gaaagaggta taagaattat cccagaagaa
     2521 agaccgcgtc agggagtcga tatctttcaa tttatgagta gtagctcatc tagtgagaga
     2581 ccaacccaac atattatcaa aaaagtagca aacgatattt atgaagtaaa acaaaaaaaa
     2641 ggtaaaatag ttgtcgtagg aggaccagta atagtgcact ctggtagttc acaatcctta
     2701 gccaaattaa taagtatggg ctatattgac ggcttacttg ctggaaatgc attagcagtt
     2761 catgacattg aaaatgcatt attgggtact tctcttggaa tgaatatcga tgacggaact
     2821 ttagcagtac gaggacacag aaatcatatg caggcaatca atgaagtttt taaataccgt
     2881 tcaataaaga aaatggttga aaaaggatct ctaacgaaag gaattatgta tgaatgtatt
     2941 aaaaataata ttccatatgc attgtctgga tctataagag acgatggtcc tattccagat
     3001 gttattacgg atattgttga ggctcaaagg aaatataaag aaattttgaa ggatgtaaaa
     3061 atggtaataa tgctctcatc aatgttacat tcaatcgccg taggtaatat gttaccctcg
     3121 tatgtgaaag taattgcagt tgatataaat caatctgttg tcaccaagct tttggataga
     3181 ggtacaactc aagctattgg aatagtaact gatgtgggtg tatttcttcc gatgatattg
     3241 caacatttaa aagatttttc aaggtagtat attagtctag gaaatattgt taccgaatcc
     3301 actacatatt tttggtaatc gttaatttat tttctttctg atattttaat tctaaatttg
     3361 ttctaatttt tgttttatta acttcatagt aatcttagga tctgctcttc cgcgagtagc
     3421 catcattact tttcccaata gaaaattaat tgcattgcta tttttttttg tatcaactac
     3481 tgcatttttt ccctcctcaa atattttgtt aatcgtttca ttcagtattt gttcatctgt
     3541 aattatagtg acctcttttt catttattaa ctttgaaggc aattctccag ttttgataat
     3601 tttaccaata atatttttag cagttgttct attaattttg ttattatcaa ccaattttgc
     3661 aatttctgcg atatggttag cattgatctt catgttttct agagactttt tcccagatga
     3721 atcataatcc gcgaaagcca aaatatcact aactatccaa tttgatattg atacaggaga
     3781 atgatatata ttgaccgcag attcaaagag gtctcctaat tccttattat caataagtat
     3841 ttgagataca tgttctgata atccgaa
//
LOCUS       DATIAS010000213         2284 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1945443, whole genome shotgun sequence.
ACCESSION   DATIAS010000213 DATIAS010000000
VERSION     DATIAS010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1945443"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VLA74_04205"
     CDS             complement(<1..660)
                     /locus_tag="VLA74_04205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49943.1"
                     /translation="MNIEKRVVKPPLCFVLMPFGKKPSNTTGLVIDFDAIYKDLIAPA
                     ITESGLEPLRADEEMAGGIIHKPMFERLILCEYAIADLTTANANVFYELGVRHAVRPW
                     STVMLFAKGSGQLPFDVAPLRAMTYILNKEGLPTDIEPTKAELIKRLKNIKENRDQDS
                     LVDSPLFQLVEGFPEIDHTKTDVFRDRVQYSADIKKQIADVRKKGKDALLDLEKQLGD
                     IM"
     gene            940..2043
                     /locus_tag="VLA74_04210"
     CDS             940..2043
                     /locus_tag="VLA74_04210"
                     /inference="COORDINATES: protein motif:HMM:NF025381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4231 domain-containing protein"
                     /protein_id="HSF49944.1"
                     /translation="MTEANSEIIPKQNNDILKHAWKLFAVYDKNAIIQQSLYKKFQFA
                     ILLLGIIVTILSLASATISPQQFTQTNNNNNGTSSSGQTTQINNNTTESTSELFLRYV
                     IIILPISISILVASSTYFKYGNKWVMLRNAAEEIKSEIYQYRTRVGNYKENKDSPNDQ
                     QKPLKPEEKLSQQVEIINNQLMSSEVGLSSLSKYDGKLPPKMYGAAENDDGFSVLDPD
                     KYVSIRIDDQINYYQGKTGRMYKNLQILQWSIFIAGGIGTFIAALGLELWVALTSTIV
                     SVFTIYLQYNQIENTLIKYNQALTQLNNIKAWWSILSEEQKKDPLNIDKLINATELTL
                     VTEHQTWIKNIKDAVSKIHTIEKSEKGKQGNSQ"
     gene            complement(2096..>2284)
                     /locus_tag="VLA74_04215"
     CDS             complement(2096..>2284)
                     /locus_tag="VLA74_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49945.1"
                     /translation="RVNQYFKDRIESFDDYYPCIRNECNLFHVYNWIQFFVSMYNDTT
                     FENYFINELNERGEYVLN"
BASE COUNT          844 a          360 c          302 g          778 t
ORIGIN      
        1 cataatgtct cctaattgtt tttctagatc taatagtgca tcttttcctt ttttccttac
       61 atctgctatt tgtttcttta tatcagcaga atattgtaca cgatcacgaa atacatctgt
      121 tttagtatga tcaatttctg gaaagccttc tacaagttga aataggggac tatctactaa
      181 tgaatcctga tctctatttt cttttatatt tttaagtcgt tttattaatt ctgctttggt
      241 aggttcaata tccgtcggta aaccttcttt attcaagata tatgtcatag ctcgcaaagg
      301 agctacatca aatggcaatt gtccacttcc ttttgcaaat agcatgactg tactccatgg
      361 acgtacagca tgtcgtacac ctagctcata aaatacatta gcatttgctg tggtaagatc
      421 tgctattgca tattcgcaaa gaatcaagcg ctcaaacata ggtttatgta ttattcctcc
      481 agccatctct tcatcagctc ttaatggttc taatcctgat tcagttattg caggagcaat
      541 gagatcttta taaatagcat caaaatctat caccaatcca gtagtgttac taggcttttt
      601 tccaaaaggc ataagaacaa aacagagcgg aggcttcaca actctctttt ctatattcat
      661 attcttaaat tattcgtaac aatttcacta aattattaaa ccatatgata atttctttct
      721 cctcttttac attttaacta aatgatgaaa atatactaga taagaagaaa taattcgtat
      781 aggtttaacc taaaattttt agctgtttat ttttaaaata tgtggaatgt tagcaactaa
      841 cttttttatc ctttttatca taaaaatctt taaacatact cttgtaatat gacaatatac
      901 ttatataatt acattttttt gttaagataa caaaacaata tgacggaagc caattctgaa
      961 ataattccaa aacaaaataa tgatatttta aagcatgcat ggaagttatt tgcagtctat
     1021 gataaaaatg ccataataca acaatcgtta tacaaaaaat ttcaatttgc aatattgtta
     1081 cttgggataa tagttacaat tctttcttta gcaagtgcta ctatttctcc ccaacagttt
     1141 actcaaacta ataataataa taatggtact agttcgtcag gacaaactac tcaaattaat
     1201 aataatacaa ctgaatctac ttcggaacta tttctaagat atgtaataat tattcttcca
     1261 atttcaattt ctattcttgt tgcatcttct acttatttta aatatggaaa caaatgggta
     1321 atgttacgca atgctgcaga agaaataaaa agtgaaatat atcaatacag aacaagagta
     1381 ggaaattata aagaaaataa agatagtcca aatgatcaac aaaaaccttt aaaaccagaa
     1441 gaaaagctat ctcaacaagt agaaataata aataatcaat taatgagcag cgaagtaggt
     1501 ttatcttcac tttcaaaata tgacggaaaa cttccaccta aaatgtatgg agcagcagaa
     1561 aatgatgatg gatttagtgt tcttgatcca gataaatatg tcagtattcg tatagatgat
     1621 caaataaatt attatcaagg aaaaactggt agaatgtaca aaaatttaca aattctgcaa
     1681 tggtcaattt tcattgctgg cggtattgga acatttatag ctgctctggg gttagaatta
     1741 tgggtggcat taacctcaac aattgtttcc gtttttacta tctatttgca atataatcaa
     1801 atagaaaata cattaattaa atataatcaa gcacttacac aactaaataa tataaaagcc
     1861 tggtggtcta tactttcaga agagcaaaaa aaagatccct taaatataga caaattaata
     1921 aatgctactg aattgacatt agtaactgag catcaaacat ggattaaaaa tataaaagat
     1981 gcagtatcca aaattcatac aattgaaaaa tcggaaaaag gaaagcaagg taatagtcaa
     2041 tagaaaataa atagctataa aaatataatt atatttcatc attatttcgg ctctgttaat
     2101 ttaagacata ttcacctctt tcattcaatt cgttaataaa ataattctca aatgttgtat
     2161 cattatacat agatacaaag aattgtatcc agttatatac atgaaataga ttgcattcat
     2221 ttcttataca tgggtagtaa tcatcaaaac tctcgattct atccttaaaa tattggttga
     2281 ctct
//
LOCUS       DATIAS010000214         2059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1535871, whole genome shotgun sequence.
ACCESSION   DATIAS010000214 DATIAS010000000
VERSION     DATIAS010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1535871"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1383
                     /locus_tag="VLA74_04220"
     CDS             <1..1383
                     /locus_tag="VLA74_04220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49946.1"
                     /translation="LSVFKYTLFYIINNNKMSYSRRLDNVLKQIDYVEDKINKDLINE
                     FSQYLILKDASANYQRNCIKIMLMFAEFIERQKDLNLTQIDSSDDILLFLDSRKRSRE
                     QDPDQKWITTWNDYLWRIKIFYRWYYNTKILKNIIFDSRNWTTPDFLNIPKKKTKRLS
                     PYSESEIWDKDELHFIIKYETSKRNKAILALLWDLNARNHEITLLRIKNIRIKEKYGE
                     GEVPYEAKTGSGPILLTLSFPYVRDWLNEHPFRNESDARLICNTENGKPLLPGAVYDT
                     MYLLKKRIVRLIESEEIKDRKEREKLRYLLNTKKWNPYCIRHSSITSDSDYLPEYALK
                     KKVRWSMNSRQGSRYIKNRMGSDLKQKILQQNGISLGAKQIKYSVVDCPRCELVNAIE
                     NKYCSKCSYPLKPEAYDELKEKEENEIKRMKLQINEMNQKFEHIFMLIQKDPKLSLVK
                     PTILLDKVNK"
     gene            1585..1755
                     /locus_tag="VLA74_04225"
     CDS             1585..1755
                     /locus_tag="VLA74_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49947.1"
                     /translation="MIINKYDGYIPIGISLPSKIVDALDEKRKDVSRSRYILRLLENH
                     IVNKNNNKEGFV"
BASE COUNT          842 a          271 c          316 g          630 t
ORIGIN      
        1 ttatcagtgt tcaaatacac cttattctat ataattaaca ataataagat gagttattca
       61 cgcagattag ataatgtatt aaagcaaatt gattatgtag aagataaaat aaataaggat
      121 ctaataaacg aattttcaca atatctgata ttaaaggatg caagtgcaaa ctatcaacga
      181 aactgtatta aaatcatgtt gatgtttgca gaatttatag aaaggcaaaa agatttgaac
      241 ttgactcaaa ttgattcttc tgatgatatt ctactatttt tggatagtcg aaagagaagc
      301 agggaacaag acccagacca gaaatggatt acaacctgga atgattatct atggcgtata
      361 aaaatatttt atagatggta ttataataca aaaattttaa aaaatattat ttttgactct
      421 cgcaattgga caactccaga ttttcttaat attccaaaaa agaaaacaaa aagattgagt
      481 ccctattcgg aaagtgaaat atgggataaa gatgaactac actttatcat aaagtatgag
      541 accagtaaaa ggaataaagc catattggca ttactctggg accttaatgc aagaaatcat
      601 gagataactc ttctaagaat taagaatatt agaattaaag aaaaatatgg agaaggtgaa
      661 gttccttatg aagccaaaac tggatcagga ccaattctcc taacattatc atttccatat
      721 gtaagggatt ggctaaatga acaccctttt cgaaatgagt ctgatgctcg tttaatctgc
      781 aatactgaaa atggaaaacc attacttcca ggtgcagtat acgatacgat gtatctactc
      841 aagaaaagaa ttgttcgact tatagaaagt gaagagatta aagatagaaa agaaagagaa
      901 aaactaagat atctattaaa tacaaaaaaa tggaatccat attgtattag acattcatcc
      961 attacttcag attcagacta tctaccagaa tatgcactaa aaaagaaggt aagatggtca
     1021 atgaattcca gacaaggatc acgatatata aaaaatagaa tgggaagtga tctgaagcaa
     1081 aagattctgc aacaaaatgg tatttctctt ggagcaaagc aaatcaagta ttcagtagtt
     1141 gattgtcctc gttgtgaact agtaaatgca atagaaaata aatactgttc aaaatgctcc
     1201 tatccactca agcctgaagc atatgacgaa ttaaaagaaa aagaggaaaa tgaaataaaa
     1261 agaatgaaac tacaaattaa tgaaatgaac caaaagtttg aacatatttt tatgctcata
     1321 caaaaggatc ctaaactgtc attggttaaa ccaacaatat tactggacaa ggtcaacaaa
     1381 tagctaataa tagattttgt taatatagta ttattcttat tatttatttt ttatattcgg
     1441 ttatttctat aaatcattat tctgttatca tattgaggta aaagataata ttaaatttat
     1501 agactttata taaagtctat aaattatata caaagttttg gtaacataac attaataaat
     1561 agttataata ttattaataa tttaatgatc ataaacaaat atgatgggta tataccaatt
     1621 ggaatctcat tgccaagtaa aattgttgac gctttagatg aaaaaagaaa agatgtaagt
     1681 agaagcagat acatcttaag attactagaa aatcatattg tgaataagaa taataataag
     1741 gaaggtttcg tttgaagatg gattccggcc cagtcgatca aacgaaaccg atggactacc
     1801 agataacata tctcaggaga gatacttaac tgatgtctaa aattaatatt cccaatccta
     1861 ttaataaaat tatctgttgt gcaataggat gtaatcgaaa tgctgaaact aatttaaaac
     1921 taacggctct gttaatttaa gatatattca cctcctctaa ctcaaaataa ttattattat
     1981 ttgctattgt atcattatac atagatacaa aaaattgtat ccaattttgt acatgtaata
     2041 gattgcattc atctttttg
//
LOCUS       DATIAS010000215         3868 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1401150, whole genome shotgun sequence.
ACCESSION   DATIAS010000215 DATIAS010000000
VERSION     DATIAS010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1401150"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VLA74_04230"
     CDS             complement(<1..198)
                     /locus_tag="VLA74_04230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49948.1"
                     /translation="MKIDRIIIVVLFRSIEYQKSICKYGKYYFYTTYEIKQFIGRDKN
                     RNNFYGVRCSHVSSSINDNYNR"
     gene            complement(288..905)
                     /locus_tag="VLA74_04235"
     CDS             complement(288..905)
                     /locus_tag="VLA74_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49949.1"
                     /translation="MVSGRYFNKGVKALDEPNLGHVVREAPDKIVIFGGKNKRYDIPI
                     SEIQQVGANVLIGLPFSEIESKYSVNRNDPLPTSRKDPWQTDNQTDLATYEGKYPNSL
                     FNKGVRTENEDHVGHVMKETDDKIVVFGYGSERFDIPKSEILAVGRNVIVKKNFPELF
                     MFKVDMNLPLPTGEPLENIDEEAYPEYYHGPRDDEEGKQDLIYPK"
     gene            1391..1834
                     /locus_tag="VLA74_04240"
     CDS             1391..1834
                     /locus_tag="VLA74_04240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49950.1"
                     /translation="MVALVDHIILTVTTGDEDIDSNERVFLGIGGREFRCRRQGDHAE
                     NPFHEKNKEQELRFGSDSNVENPELNDPRSGEHMSAGSPIEKVNRHKLYLRRESTTNS
                     RWTITTARVEVFDASDEFLTPVPNGSVIDYPGITLGNESGHIVMF"
     gene            complement(1996..2565)
                     /locus_tag="VLA74_04245"
     CDS             complement(1996..2565)
                     /locus_tag="VLA74_04245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49951.1"
                     /translation="MNKKVEFDGGNSIRRNNKSVNEKAIKDSVKWSITEYSVFVSKLV
                     KRGLSLNIDKKLEKGWFSGIYVNYQGEINFTDPFTMENRPANNDIIGAVGSFNLNDSQ
                     EYYVIPETKDKFVEVLDNKGDIDPDFPLKDYHLHLSHTSSDSKYTSKVSIRKYDDAVS
                     NFIKNEIQKGSFLDLFEIYIEEKINKLII"
     gene            complement(2812..3429)
                     /locus_tag="VLA74_04250"
     CDS             complement(2812..3429)
                     /locus_tag="VLA74_04250"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HSF49952.1"
                     /translation="MSGEVGNDISKSRIETLTDGVFAIVMTLLVLEIAVPQLSHSEAA
                     IELPKQLLELWPVILSYGTSFIILGFFWIAHDYQFHYIKRANRTFLWITIFYLMFIAF
                     VPFSTSLIGEYGDQQISVIIYGVNISIIGFWEFIRWQYATKDHRLVDSDLDPTFIIIM
                     SRRFLLGPTIYLIAVAISFVSTQVSLVLFIATPLYFLVSARKDKS"
BASE COUNT         1301 a          616 c          533 g         1418 t
ORIGIN      
        1 tcggttatag ttatcattaa tggaactact aacatgagag cacctaacac cataaaaatt
       61 attcctattc ttgtctcttc caataaactg ctttatttca tatgttgtat aaaaataata
      121 ttttccatat ttacatatac ttttttgata ttctattgat ctaaataaaa caacaataat
      181 aattctatca attttcattt atttgtcaat ttaaggattc tgtatctctt ataatttatc
      241 ttgatctttt ttaagatctt attataaata agatcttaac gttactttta ttttggatat
      301 attaaatcct gtttaccctc ttcatcatct ctaggaccat ggtaatattc aggatatgct
      361 tcttcatcta tgttttctaa tggttctcca gttggtaatg gtaaattcat atctacctta
      421 aacataaata attctggaaa gttctttttt acaataacat ttcttcctac tgcaagtatc
      481 tcggatttgg gaatatcaaa tctctcactt ccatatccaa aaactactat tttatcatct
      541 gtttctttca taacatgtcc aacgtggtct tcattttctg ttcttactcc tttattaaat
      601 aatgagtttg gatatttgcc ctcataagtg gccaaatccg tttgattatc cgtttgccaa
      661 ggatcttttc tactagtagg aagtggatca tttcgattta cactatattt actttcaatt
      721 tcagaaaatg gtaacccaat aagaacatta gcaccaacct gttgaatttc agaaataggt
      781 atatcgtatc tcttattttt tccaccaaat atcacaattt tatctggtgc ttccctaact
      841 acgtgtccta agttaggttc atctaaagct tttactcctt tgttaaagta tcttccggat
      901 accaatataa atagattgta attattctaa ataaagattg ctactataag aaatattgca
      961 gaggcttgat gctgggatat tgttttataa tataaaaaaa ataatgaggc aataaagaga
     1021 ttttatacta ttatgaaatt ttaatacata atttatatcc taaattattt accgaaatat
     1081 tattaattat gattttgcca aaagtttctt cttgtttctt ccatttagga caaaaaacaa
     1141 ctattttgta tagtttcttt ttagattttc attgtaattg ttatttttta caacagttgc
     1201 tttctcgaac tcttttttgg tagaatattt ttgagcactc cctttgttct atcttgtttt
     1261 taacattttc tgtgaaccta tatcatcaat tttgctgcag ggaaaatttc caagcgatgg
     1321 gatttaaaag gtaactgatg cctaggatta aagatcacat ttaaaaacct tataataata
     1381 tatattaata atggtagcat tggtagatca cataattctt actgtaacta caggagatga
     1441 agatatagat agcaatgagc gcgtatttct tggcattgga ggtcgggaat ttaggtgcag
     1501 aagacaaggt gatcatgctg aaaatccctt tcatgaaaaa aataaagaac aagagttaag
     1561 atttggaagt gatagcaatg ttgaaaatcc ggaactaaat gacccaagaa gtggagaaca
     1621 tatgtccgca ggtagcccaa tagagaaagt aaataggcac aaattatatc ttcgcaggga
     1681 atcaactaca aattcacgat ggacaattac tactgcacgt gtagaggtat ttgatgcttc
     1741 agacgaattt cttacccctg tgccaaatgg atccgtgata gattacccag gaataacatt
     1801 aggtaatgag tcaggtcata ttgtaatgtt ctgaaattca aactttttta ttttttattt
     1861 atatttccag ttccagcata catgttttaa ttaggtttct tgtaataatt gcaaaattaa
     1921 tagcaaaatt aaaatattat gttactgaat tctgttataa cgagaattct caactaaata
     1981 ttaatattta ttcatctaaa ttattaattt atttattttc tcttcaatgt atatttcgaa
     2041 taaatctaaa aatgaacctt tttgaatttc atttttaata aaattagaga cagcatcatc
     2101 atactttctt atactcactt tactggtata tttagaatct gaagaagtat ggcttaaatg
     2161 tagatgataa tcttttaaag gaaaatcagg atctatatct cctttattat ctaatacttc
     2221 tacaaattta tcttttgttt ctggaataac ataatattct tgggaatcat taagattgaa
     2281 tgatccaact gctcctatga tgtcgttatt agcaggtcta ttttccatag taaaaggatc
     2341 ggtaaaattt atttctcctt gataattcac gtaaattcca gagaaccaac ctttttcaag
     2401 tttcttatca atattcaagc ttaaacctct ttttactagc ttactaacaa atacagaata
     2461 ttctgtaata ctccatttaa cagaatcttt aattgctttt tcatttactg atttgttatt
     2521 tcttctgatg ctattgcctc catcaaattc aacctttttg ttcaaccttg taattattac
     2581 taactcattt tatatattta taattcatgt tttataactt aaaataagtt tctatctgtc
     2641 attttatttt tttactaaac tacaaaattg tatcaaaaac agttcacaca cctccgaacc
     2701 cgctaatcaa ttgggatcat attctaccaa cgggaatata atattggagc tacttgtcaa
     2761 aaagcccatg aatccgcttc ggttcatcta cttatttttg gtaaaccaaa atcaagattt
     2821 gtcctttcta gccgatacta gaaaatatag aggagtagct ataaacagca caaggcttac
     2881 ctgggtactt acaaaagata tagcaactgc aatcaaataa atagtaggtc ctaaaagaaa
     2941 tcttcttgac attattatta taaaggtggg atcaagatcg ctatctacta aacgatgatc
     3001 ttttgtagca tactgccatc gtataaattc ccaaaatcca attatgctta tattgacccc
     3061 ataaataatt acggagattt gctgatctcc atactctcca atcagagatg ttgaaaatgg
     3121 tacaaatgct ataaacatta gataaaagat agttatccag agaaaggttc gatttgctcg
     3181 tttaatgtag tggaactgat aatcatgtgc aatccaaaaa aaacctaaaa ttataaaact
     3241 tgttccataa cttagaatca caggccataa ctcgagtagc tgtttaggaa gctcaatagc
     3301 cgcctctgaa tgagatagct gtggtacagc aatctcaagt actaacagag tcatgactat
     3361 agcaaaaact ccatcagtaa gtgtttcaat gcgagatttg cttatatcat ttccaacttc
     3421 tcctgacaat cttctacatt cacctgtaga tagatttcgg agattataga tgtaaaatgt
     3481 tttgtttaat cagccaaaat ggttagaaat agcactatat aggattttca gtgttgacga
     3541 tcatgaacct ctgactaaaa ttaaatgaga taaggttaaa gacttagagc ttgactactt
     3601 agattttttc atttgagtcg aaatattaca ttatattgta tagtcattta acaatcagcg
     3661 gattgaaata ttgatacatt tggtttaaag aagtataatc aaatattaaa agtagaaatt
     3721 atacaaaaca aaaattgcta ctaggattat cagattattt cgttggatta tatatacaaa
     3781 tatgtgctct ctataggagg attcaaatcc cattgattcc ttttgttatt ttttagatat
     3841 tcttcagaaa taatatgatg aagatatt
//
LOCUS       DATIAS010000216         2880 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_174425, whole genome shotgun sequence.
ACCESSION   DATIAS010000216 DATIAS010000000
VERSION     DATIAS010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174425"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            830..1258
                     /locus_tag="VLA74_04255"
     CDS             830..1258
                     /locus_tag="VLA74_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020266909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSF49953.1"
                     /translation="MIGSNIVTKYITLSSRGENDIIDITSNVDKILLESQLKNGIVTL
                     FVVGSTAALTTIENEPGLRKDFPRMLERIASKNIEYEHDNTWHDGNGHSHVRASLIGP
                     SLTIPFVDGKVTLGTWQQIVLLELDTRSRNRKIVVQLIGS"
     gene            1426..2373
                     /locus_tag="VLA74_04260"
     CDS             1426..2373
                     /locus_tag="VLA74_04260"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF49954.1"
                     /translation="MTLWYDNSAPAISGKKGKSLLHNFFVYGKEGLTINPYQGCHHRC
                     GYCYATYDWSPEFFNHIYAKINAADLLYEQIRKRKIRVSHPVMISSATDAYQPAELKY
                     SITRQCVQVLQKFEIPYYIFTKSIIIERDLELHKRYSDKCFIVWSITTCNEEVKRIIE
                     PGTPTFDSLFNVIEKFTKSEIQCVVNIDPILPLITDSKSDLEKILDTAVTSGVKFISG
                     AILRLRSDIWERLKSMLDLLKMPDAKKQYEQIYNIQEPIKGKNSFNAENKYSYRILNM
                     LMKESDKRDLKYGFPNLTLESGYSSADNLKMVTLFDFIK"
     gene            2456..>2880
                     /locus_tag="VLA74_04265"
     CDS             2456..>2880
                     /locus_tag="VLA74_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49955.1"
                     /translation="MKSYNIDNFQFMLIILSVSLMFIAGNIGILTESLAIFESKPDQS
                     FITYDNSKMKFSLMYPSNWQMEEHFTGFVTFTSPIEDYTQNRFPAGLGIFPLNLESQN
                     ISLTALKNVHLKNLTGNLKEFQLLGSNQIILPGNYPAQQ"
BASE COUNT         1064 a          446 c          450 g          920 t
ORIGIN      
        1 aagatagcta tggaaaggat gaatataaaa attacgactc taaatacaaa gatagctatg
       61 gaaaggatga atataaaaaa cattatgacc gagaagacta atcaaaggga atgacaaact
      121 aaaaaaagtc acataaaaat attttttttc ttttttaaca agttactatt ggtctaatgt
      181 aatcgttctc aacgtctatt ctttttcaca tgaataattc tgaatgttaa atattaaact
      241 acttttaatg tttcgcctag ccaggataaa ttaagaacat aaataactaa ctaactaatg
      301 gacaaacaga gtagagaccg actcgaaata atacacggtc atcactatta tttgatgtct
      361 cgattacatg aataattgta taaaatgaag ttggaaaatg tacttaattt ttcctaattt
      421 tcagcaatta ctccccgatc ccttctgtaa ggaacttaat taatatggct aaggtagaac
      481 ctccagagat tgacgaaaat ttacttaaaa caataccagc taagaggcaa atctaaacat
      541 ttatccatga gaatcccaaa catacaatat aatttatcta attgagataa agaacgggta
      601 ctctcagcag gagactaatg aaaaagttcc cagcaaagga ttttataaat tcatgaataa
      661 aaatcgaaaa aaatcgattc tttttttacc tttttaaata gttaattaat caatctacta
      721 ctgtattgat aacacttttt gcattgttgg gttaatttat cacctatttt cagatgattt
      781 atatctggac gtataattta aatgcaaaaa tttctatatt ttcaataaaa tgattggatc
      841 aaacatagtt actaaatata ttacattgtc ttctagaggc gaaaatgata tcattgatat
      901 tacaagtaat gtagacaaga tattactaga aagtcaattg aaaaatggca tagtaacact
      961 ttttgtggtt ggttctacag cagcattaac taccatagag aatgaaccag gtctgagaaa
     1021 ggattttccc agaatgttgg aacgaattgc atctaaaaat attgaatatg aacatgataa
     1081 tacgtggcat gatggcaatg gacactcaca tgtaagagcg tcattaattg gacccagttt
     1141 aactatccct ttcgttgatg gtaaagtcac ccttggaact tggcagcaga ttgttttact
     1201 agagttggat acaagaagta gaaatagaaa aattgtagtt caattaattg gaagttaaat
     1261 ttcctaaata gatttttttg taactatatt tttcaaagac tgacgatctc tttttatctt
     1321 aatacgatat aataatttga atttacatct tttgttatat tatatcctct cccccttatc
     1381 taagagtatt acacaattta tctattatcc gtacgaaaac ttttcatgac cctatggtat
     1441 gataattctg cacctgcgat ctccggtaag aaagggaaat cacttcttca caattttttt
     1501 gtgtatggga aagaaggatt gaccattaat ccatatcagg gatgtcatca tagatgtggg
     1561 tattgttatg caacttatga ctggtctcca gagttcttca accatatcta tgctaaaata
     1621 aatgctgcag atctgttgta tgaacaaatt agaaaaagaa aaatcagagt ttctcaccct
     1681 gtaatgattt cctcagcaac ggatgcttat caaccggccg agttaaagta ttctataact
     1741 cgacaatgtg tacaagtatt acaaaaattt gaaattccgt attacatttt taccaagtcg
     1801 ataataattg agagagattt ggagttacat aaacgatatt ctgataaatg tttcatagtg
     1861 tggtcaatta ctacttgcaa cgaggaggta aaaagaataa tcgaaccagg cactcctaca
     1921 tttgactctt tatttaatgt aatcgaaaaa ttcacaaagt ctgaaatcca gtgtgtcgtt
     1981 aatattgatc ctattctacc tctaatcact gattcaaaaa gcgatttaga aaaaatttta
     2041 gataccgctg tcaccagtgg cgtcaaattt atcagtgggg caattttgag gcttagatcc
     2101 gacatttggg agagattaaa gtctatgctg gaccttctga agatgccaga tgcaaaaaaa
     2161 caatatgaac aaatttacaa cattcaggaa ccgataaaag gaaagaacag ttttaatgcc
     2221 gaaaataaat attcatacag aattttaaac atgttgatga aagaatccga taaaagagat
     2281 ctgaaatatg ggtttcccaa tctgacactt gaaagtggct attcatctgc agataattta
     2341 aaaatggtta cacttttcga tttcataaag taacaaacag aagacccacc tgaatttgta
     2401 tatgaaaaag tgttaataaa gcataaaata gccgataatg aatataaaat aattattgaa
     2461 atcatataac atagataact ttcaatttat gctgataata ctttcggttt cattaatgtt
     2521 cattgcaggt aatattggaa tattaaccga gtcattagca atttttgaga gcaaaccaga
     2581 tcaaagtttt attacatatg ataatagtaa aatgaaattt agtctcatgt atccctctaa
     2641 ttggcagatg gaagaacatt ttactggctt tgttactttt acttctccaa ttgaagatta
     2701 cacacaaaac cggtttccag caggactagg aatttttcca ctaaatttag aatcacaaaa
     2761 tatctctctg acagcattaa agaacgttca tcttaagaat ttaacaggca atcttaaaga
     2821 atttcaattg ttgggatcta atcaaattat tcttccagga aattatccag cacagcaaat
//
LOCUS       DATIAS010000217         2461 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_447657, whole genome shotgun sequence.
ACCESSION   DATIAS010000217 DATIAS010000000
VERSION     DATIAS010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447657"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(910..1716)
                     /locus_tag="VLA74_04270"
     CDS             complement(910..1716)
                     /locus_tag="VLA74_04270"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49956.1"
                     /translation="MYTEYGKSTSNKHVLFIHGLGASSLAWRDIPYALSNYFHTITVD
                     LIGFGESDKPMEGDYTIKGFSKFIANFLKEKIKIGENERISIVGHSLGGYIAAQFAIE
                     NKKTIEKLVLIDSSGLLEKPTPLLEQYLSAAMEIEPVLRYKKLERVLGAIYSNPLFLP
                     PIVVDKFVETIIKEGARNAFERAYENSTSTQIELQGFRQIQDIPCLILWGDKDNLIPI
                     EYYKKFKEKLPEFPESKAKYEIINGTGHAPFVERTALVYEKLRIFLSECK"
     gene            2171..>2461
                     /locus_tag="VLA74_04275"
     CDS             2171..>2461
                     /locus_tag="VLA74_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49957.1"
                     /translation="MKIEEIYREIIKIHSILDNYHNQLNANKEKFEKIYNENISSKTE
                     IRNIILTIITFFAGFLVTVRDLDYVKSNLMSILFILAIVGIGVYIVFYIKKRD"
BASE COUNT          890 a          359 c          372 g          840 t
ORIGIN      
        1 aatcaatggt cacacaccat ctgaaatgtt tctcatgaaa ggaagattaa atagttgtac
       61 gaataacaat acagtcaagc agataaaaag tgttacccat gctggtaagt gaatctgtta
      121 cctatatatg gaagtacaac aattaagtat aattcctggt atatcaaaag aacaaataat
      181 gagaaaacct gttgataaaa aggaatttac aaatactgta agaaaattgt taaattaata
      241 aaaattgcat tcagtattaa ataatatttt aaaaaggaac tacatgttta tttttttcat
      301 tcaacaatat taaaccaaca ataaaggtaa gaaagaaaga atgccagagt gagtcaaaag
      361 gaatacccac tataaaagaa atcttacagt agtagaacat aacagaaaac tgattttcaa
      421 aaagggaagg atagcgttag ctatggcaga agatggattg tagaatctgt ctgttttttc
      481 cactataaag agaatatttg atgaatatac attattctac agtcaaatat ccaaatatgg
      541 taaaagagat aatgttgaaa gcgtcgttgt acattttggt tacatctata atataacata
      601 atataataga ctacaaacat agtattatta tcaataagtt aatgaatcac gcaacaaagc
      661 agtaataatc aatataacat ccaatagtta ttgtgataaa aaagggtaag aaagatagag
      721 tgtactgtat tcatttatga ttgcaaaata gagtcaattc tcttatattc cactgaattg
      781 gttcacacaa tcaaaactgg taaaactatc ttatctatat cttgaagaac atatttctta
      841 gaacagatat agacactgat ttcagtggtt gtccttctct attaaaaact actgtttttc
      901 ctatttgtat catttgcatt cgcttaagaa tatacgtaat ttctcatata ctaatgcagt
      961 tctctcaaca aatggtgcat gacctgtacc gtttattatt tcatatttag cttttgattc
     1021 tgggaattct ggcaacttct ctttgaactt cttataatat tcaattggta ttagattgtc
     1081 cttgtcgccc cataagatta aacaaggaat atcttgaatc tgcctgaatc cttgtagttc
     1141 aatctgtgta cttgtactgt tctcataggc tctttcaaat gcatttcttg cgccttcttt
     1201 tataattgtt tcaacaaatt tgtcaactac tataggaggc aagaataaag ggttggaata
     1261 tatagcacct aatactcttt ccaacttctt atatcttaat actggctcta tttccattgc
     1321 agcagacaaa tactgttcca gtaatggagt gggtttttca agaagacctg aggagtctat
     1381 caatacaagc ttttctatcg tctttttatt ttctatggca aattgtgcag ctatatagcc
     1441 acctaatgag tgacccacta tgcttatcct ctcattttcc ccaatcttaa ttttttcttt
     1501 aaggaaatta gctatgaatt tgctaaatcc tttgattgta tagtctcctt ccattggctt
     1561 atcgctttca ccaaagccta tcaaatcaac agttatagta tgaaaatagt ttgacaatgc
     1621 atatggaata tctctccaag caagagatga tgctccaaga ccgtgaataa ataatacatg
     1681 tttattgctt gtactctttc cgtattcagt atacacaata ggcatttgga atgaggagta
     1741 ccagtctata tactatattt gtttataatt atcaatagtc tgtagcacta ttatctttaa
     1801 atttccttat tcttctaatg tcctagaaat tggtctatat ataatgaatc tctactagaa
     1861 cctggtcata tcctgatgaa tggatagtgg gtttattaaa tcacaaacaa cagaggaact
     1921 agcaaatatg aataaaagaa agttatagca gaccattttt tctatatcat actagttata
     1981 tggaatttct agcatttctc aaacttggat tttctatttt atagagagca gtacagggaa
     2041 ttgcaagaag aggcttggca gaatatatct agaatatacg aaatttggtt agcgaatata
     2101 attatgaaat tttcttattg gatgataaat atgattattt agttcattac aaaagctaaa
     2161 aaatgaagaa ttgaaaatag aagagatata ccgtgaaata attaagatac atagtatatt
     2221 agacaattat cataatcagt taaatgcaaa taaagagaag tttgaaaaaa tatataatga
     2281 aaacatatca tcaaagacag aaataagaaa tataattttg accataatta ctttttttgc
     2341 tggcttttta gttacagtta gagatttaga ttatgtcaag tcaaatttaa tgtctatctt
     2401 atttatcctt gcaatagttg gaataggtgt atatatcgtt ttttacatta aaaaaaggga
     2461 t
//
LOCUS       DATIAS010000218         2541 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_447814, whole genome shotgun sequence.
ACCESSION   DATIAS010000218 DATIAS010000000
VERSION     DATIAS010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447814"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            544..1647
                     /locus_tag="VLA74_04280"
     CDS             544..1647
                     /locus_tag="VLA74_04280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49958.1"
                     /translation="MLNYIAINPNSSTNDCYMYLNDTPYAPISYEDVNLRIQNLIDLG
                     LIQNVKNLDNKNNKKSIENYGSLSKEKSKQDKYLRYYSVSSAGIFYLFSTDPEITDFE
                     IILKNKEDGLFVNFLYSNLDFSTLEKIENIRTIIHITSFLGKCCKTIQQVLKTIRRID
                     EKEGESDYIGFVQGLADPEYDDGLHGPRAFILGLKNILKIEWLDLDETKIIEVEKNKL
                     FKIHDEKENELFLEICPENNVAVLSDNKNHKIREFYLEKDLRSITGEDYPITYFNAIT
                     VEDYIDKIFANKDNFHFYPEMDEYESELCEELLVHMRTTYPIMNEEHRMIQRQDCIAI
                     AKDKNFQELESHFKRKIDSCHENFVRLSHIKQV"
     gene            complement(1771..2061)
                     /locus_tag="VLA74_04285"
     CDS             complement(1771..2061)
                     /locus_tag="VLA74_04285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49959.1"
                     /translation="MKSQRYRMSNDKVWKQMRQRINDPYRYYKKGLKYGDYMLPSGYY
                     VSQTYGALHKCWLGFVIAKEKHEWDKIDLYAIRIQKLEKELGLNNRLFRLGN"
BASE COUNT          980 a          353 c          394 g          814 t
ORIGIN      
        1 attgttcttc ttccatctaa cctgtcgaag tacgcttgta caccaacttt catcaggaag
       61 agatgtagtt aaagtaaaca catcttaatt aggtgttatc cagctttaag cttgactgaa
      121 acatttgtca ataagagcga tggcattttg ttcaacctaa ttgctgctgt aggtcttcaa
      181 atctggataa taggatgaaa aaatctgttt gatataatat ataatattcg aagataaatt
      241 gtaggtatta taatgtcata gcctgaacca aagactacga ttctttaggt ttataggtct
      301 agataatgtc cagactatga caatatgctc gtattcccta tgagatagca aaaaactaat
      361 ttttgaagta tttattactt ttgaaactat caagtcaatg ccttttaaag actttcccca
      421 tttagcagta atgacatcct tacatcctta ctatactgac taactaaaat tcgtttacaa
      481 attcttactg ataagatagg ttaattatgc gtgaaaatca acatttttca tatatctata
      541 aatatgctca attatattgc aataaatcca aattcttcta caaatgattg ttatatgtat
      601 ttgaacgata ccccctatgc gcctatatca tatgaagacg taaatttaag aatacagaac
      661 ttaatagatt tgggattaat tcaaaatgtt aaaaatcttg acaataaaaa taataaaaaa
      721 tctatagaaa actatggttc tcttagtaaa gaaaagtcaa aacaagataa atatctcaga
      781 tattattcag tatcatctgc aggaatattt tatctgttct caactgatcc agagatcaca
      841 gattttgaaa taatattaaa aaataaagaa gatggacttt ttgtaaactt tctctattct
      901 aatttggact ttagtacgct tgaaaagata gagaacatta gaacaataat tcatattact
      961 agctttttgg ggaaatgttg taagacaatt caacaagtgc taaaaacaat aagaagaata
     1021 gatgaaaaag aaggagaatc agattatatt ggttttgtac aaggtttggc agatccagaa
     1081 tatgatgatg gtcttcatgg tcctagagca ttcatactag gtttaaaaaa tatattaaag
     1141 atagaatggc tagatctgga cgaaacaaaa ataatagaag tcgaaaaaaa caagctcttc
     1201 aaaattcatg atgaaaaaga gaatgaatta ttcttggaga tatgtccaga aaataatgta
     1261 gcagtcttat cagacaataa aaatcataaa ataagggaat tttatcttga aaaagatctt
     1321 aggtcaataa ccggtgagga ctatcccata acatatttca atgctatcac agtggaggat
     1381 tatatcgata agatatttgc taataaggat aattttcact tttaccctga gatggatgag
     1441 tatgagtctg aactttgtga ggaattatta gtacatatgc gtactacata tcctataatg
     1501 aatgaggaac atagaatgat acaaagacag gactgcatag caattgcaaa agataaaaac
     1561 tttcaagagc ttgaaagtca cttcaaacga aagattgatt cctgtcatga gaattttgta
     1621 aggttaagtc atattaagca agtttaaatg aagattaaca aaaaataaaa aaaacttaag
     1681 gattgagtga aagatcagcg atataaacga agacgagtcc gttaatattt caacaatcaa
     1741 aaacagaaat agaaattgct agaaaatcat tcaattcccc agtctgaaaa gtctgttatt
     1801 taagcctaat tctttttcta gtttttgtat tcttatagca tacagatcta ttttatccca
     1861 ttcgtgtttc tccttggcga ttacgaaacc aagccagcat ttatgaagag ctccatacgt
     1921 ctgtgaaacg taatatcctg aaggaagcat ataatcacca tattttaagc ctttcttgta
     1981 atatcggtaa ggatcattaa ttctttgacg catttgcttc cagactttat cattggacat
     2041 cctatatctt tgtgatttca tctactacat aacaattaga acctaaagtt aataagctaa
     2101 caaaaaaaat actgataata aaatttagtt tagttaaaaa aagttttttg aagatagctt
     2161 tgtatatgtc ccacataaag gtactatatt ttaaaaactt ttacctacaa tattttttat
     2221 gataattagt aaagctacat agaggatcat aatactatag acatttatga ctgttgcaac
     2281 atatattatt tttttgttca aagaaaaaaa ttttattaat aaattttatt tgaaaagacc
     2341 agcagcattt agagaataga tggacttgaa ctaatagaaa aaaagatgtg ggggaaatac
     2401 aataaagaaa aagattcatg gaagagagtc cagatactaa aggatatagc tcagatccaa
     2461 ccttatttag gcttatgtta tgacgtttct aaatttgtaa ttgataaaat aacaattgag
     2521 gcaaaagaaa aaggcattat a
//
LOCUS       DATIAS010000219         2153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_38414, whole genome shotgun sequence.
ACCESSION   DATIAS010000219 DATIAS010000000
VERSION     DATIAS010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38414"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            455..694
                     /locus_tag="VLA74_04290"
     CDS             455..694
                     /locus_tag="VLA74_04290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49960.1"
                     /translation="MSNNFIVPNSKEIIKKEAVAIDESELGEVEEVDVEYIITQTGTM
                     YKDKFYIPKHLVERFDGHYVWFRIIGEKGQKLKRD"
     gene            complement(862..1590)
                     /gene="tmk"
                     /locus_tag="VLA74_04295"
     CDS             complement(862..1590)
                     /gene="tmk"
                     /locus_tag="VLA74_04295"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HSF49961.1"
                     /translation="MIDTNYTNNNNNKNKINYYGYGIPYLHDIEIKGKLIIIEGPDSS
                     GRSTQISLLNSYLEANGHAVLNTGLKRSELISEGILQAKESHLLRKRTMSLFYAADFA
                     DQLESKIIPSLRAGYIVLADRYIYTLMARDAVRKINRRWSHNLYGFAIKPNLVFYLDV
                     EPKELLRRRFEKNMTLDYYESGEDLGISDDILESFLLYQQKIKQEFIRMQKIYGIIAI
                     DGNRPIESINVDLKNKIDQFLAKE"
     gene            complement(1595..>2153)
                     /locus_tag="VLA74_04300"
     CDS             complement(1595..>2153)
                     /locus_tag="VLA74_04300"
                     /inference="COORDINATES: protein motif:HMM:NF014299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49962.1"
                     /translation="FLTEWNSSEAIKEVTSKGKKKEKLTPTTFSLLHATDFADRYEKN
                     IFPLLRAGYIVLSDRYIYTAYARDIVRGCHPIWVKKVYDYALKPDLVFYFRVPVDIAA
                     ERILSGRPKLKYYEAGMDLDLSNDIYDSYRIFQSKIIEQYDKMIMKENFVLIDGTYNI
                     EQQQKLVRDKFNEIVMKTKSASTQG"
BASE COUNT          719 a          322 c          302 g          810 t
ORIGIN      
        1 actatgtgtt gccatacagt atagatgtga atgctctttc tatgcagata tagtgaaatc
       61 tgccgtgttt gaggatacgc aataactgaa ccgctaatct gacatatttc tattgatgtt
      121 tattcaataa ttaactgtag attgttgtta gctatcagga tttctacaaa gcctatgagg
      181 tttataatta tatatattat ttaatttcta tttttgagga tagtaacaag agaaatagaa
      241 aattccacag aaaaggcagt gagaactctt tctatggatt ggcggaagag tagaaactat
      301 attatagtga actatacaca tatttatttt acttccttat aaaaactata gatccagata
      361 ttgttattaa aatggctata tgttttatac ttgttgatat tctatatata aaatatatta
      421 attatttata tgaaataact aactaattag tacaatgtct aataatttta ttgtaccgaa
      481 ttccaaggaa attattaaaa aggaagcggt ggctatagat gaatctgaac ttggtgaagt
      541 tgaagaagtc gatgtagaat atattataac ccaaactgga actatgtaca aagacaaatt
      601 ctatatccca aaacatctag ttgaacgttt tgatggccat tatgtttggt ttaggataat
      661 aggagaaaaa ggacaaaaat tgaaaagaga ttaatttctt ttaccatcta ttttaagatt
      721 taagacaatt atttctgaat ttttataaca taatagaaca atataagttt ctatgatatt
      781 atataaagaa tattttatca attattatat actttatcga ataaagaaca ttatagattc
      841 aaaacttaaa tcaatagtat tttattcttt ggctaaaaat tggtcaattt tgttctttaa
      901 atctacatta atactttcta ttggcctgtt accatctatt gcaataattc cataaatttt
      961 ttgcattcta atgaattctt gtttaatttt ctgttgataa agtaagaatg attctaaaat
     1021 atcatcagaa attcctaaat cctctcctga ttcataatag tcaagcgtca tatttttctc
     1081 aaatcttctc cttaaaagct ctttaggttc aacatctaaa taaaaaacaa ggttaggttt
     1141 aatcgcaaaa ccgtataaat tatgagacca tcttcgattt atttttctta ctgcgtctct
     1201 tgccataagt gtatagatat atctatcagc taatactatg taaccagctc tcagcgaagg
     1261 aataatttta ctttcaagct gatctgcaaa atctgcagcg taaaataagc tcatggttct
     1321 ctttcgcaat aagtgacttt ctttggcctg tagtatgcct tcgcttatta gttccgacct
     1381 tttcaaaccc gtattcaaaa cggcgtgacc atttgcctca agataagaat taagcaatga
     1441 tatttgtgta ctacgacctg acgaatcagg tccctcaatt ataattagtt tgccttttat
     1501 ctcaatgtca tgtagatatg gaattccata tccatagtaa ttgattttgt ttttgttatt
     1561 attgttgtta gtatagttgg tatcaatcat agatttaacc ttgtgtacta gcagatttag
     1621 ttttcattac tatttcatta aatttatctc gtaccagttt ctgttgttgt tcaatattat
     1681 atgtaccatc aataagtaca aaattttcct tcatgatcat tttatcatat tgttcaatta
     1741 ttttactttg gaaaatacga tagctatcat aaatgtcgtt actcaagtca aggtccattc
     1801 ctgcttcata atattttaat ttaggtctac ctgataatat tctctcagca gctatatcaa
     1861 caggaactct aaaataaaat acaaggtctg gttttaatgc gtaatcatat acttttttta
     1921 cccaaattgg atgacatcct cttactatat ctcttgcata agctgtatag atatatctat
     1981 cggataatac tatgtaacca gctcttaaaa ggggaaagat atttttttca tagcgatctg
     2041 caaaatcagt tgcatgaagt aaagaaaatg tagttggagt taacttttct tttttctttc
     2101 cctttgaagt tacctctttt atagcctcag aagaattcca ttctgttaaa aat
//
LOCUS       DATIAS010000220         6579 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1264788, whole genome shotgun sequence.
ACCESSION   DATIAS010000220 DATIAS010000000
VERSION     DATIAS010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6579
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264788"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VLA74_04305"
     CDS             complement(<1..297)
                     /locus_tag="VLA74_04305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49963.1"
                     /translation="MLFQKYNMLWLFISIITILYITFSSSNIIINSITIAEAENDNYT
                     SLCNKSVIACLNNILHLQRIEQDYKIQTDIILDEINSTKLKEWIDTLSSFPTRHT"
     gene            complement(799..1143)
                     /locus_tag="VLA74_04310"
     CDS             complement(799..1143)
                     /locus_tag="VLA74_04310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49964.1"
                     /translation="MLVTEHFLYSLVEKYGRHIIYSDGGSWYPEACTSLRLEHRLHSP
                     YEKSIIERAIEYVKDRTEQFDDCYPCRKFDCILSHVHNWIQLFVFMHNGIRGSHLKFS
                     LLMYIVGGDTSQ"
     gene            1562..2872
                     /locus_tag="VLA74_04315"
     CDS             1562..2872
                     /locus_tag="VLA74_04315"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF49965.1"
                     /translation="MFNLSLQQLTKQQKVIITGSWLGWALDGYDLVLMLFVISSINQL
                     FFPSTDPSMSLLATFGTYVVTLIMRPFGGAFFGNFGDKHGRKKAMIITITGFSLVTFC
                     TGLLPAWQSVGLLAPILLIIIRFLQGFFAGGEWGSGAVISMESSPKSMRGLLSGFVQS
                     GFTVGFLLASISFQLTQFAFPDDKFIEIGWRVLFFTGIIPGLVALFVRLKMDESQVWI
                     KKVKEKKIARIPLKNVLSNKDNRRRFFLSLIVMTGLMFSYYISIGFMPTLLEKYVKLE
                     RKEVASIMIVTIIFSLIGHLFTGFISQYIGRLKILTIFGIASLIVAIPSLNGIFTASN
                     IFEIAFYSSLFVFFVSSGFGPMPAFLAERFPTEIRNSAAGFVYNGGLLVGSWAPLIAI
                     TLLSYFDKYNITQYYAVAINVIIASIILIIGSKVNPDTRNVDLG"
     gene            complement(3260..4057)
                     /locus_tag="VLA74_04320"
     CDS             complement(3260..4057)
                     /locus_tag="VLA74_04320"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF49966.1"
                     /translation="MKYHWDATTYDRISDAQQSWGQEIIEYRKWKGNEIVLDAGCGSG
                     RLTKILSIKVPQGKVFAVDFDLSMIRLAKENLAKFSNIEFIKMDISQLELAEKVDVVF
                     SNAVLHWILNHKKVFECFWKILKPDGQLLIQCGGHRNLTKTLSIINKVSRSKEFYNYF
                     CNNKGDDIWRQTWYFAKKEDTERILQEIGFENIQVFLEVKEAKFPNKEEYFLFIKTIV
                     LLPYLKYLPNDMLKDKFAKSVIQEIDTNAKELQWKLDFVRLNINAIK"
     gene            complement(4675..6411)
                     /locus_tag="VLA74_04325"
     CDS             complement(4675..6411)
                     /locus_tag="VLA74_04325"
                     /inference="COORDINATES: protein motif:HMM:NF013275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSF49967.1"
                     /translation="MTLNLAETSNFRGLMLFIVTIAYPTLNSILTILAITILLGIRND
                     KRHLVPWVCELVGFLAIVVGDSWFAIIVLTTFVEQLWISALLLSAHYLLIAGGLVWYM
                     RYSIKWKSKDIIFKIAVWTRNRTSKQLILMSITTTISLVLFFGFYISNGFNGSEKSLL
                     LVNYNTEKPLVSAIGQINNHKEEFLVGAIVPLTGSSSSMGKPMKIALEKAVNDVNRYF
                     ESINSTSKFDLVIANSKSSPEDSLEAIKQLHSIGAKIIVGPATSSAVSAAKEYADAND
                     IILISYSSTSPLLSIEGDNLLRLVPDDTNQGKVIAERMIDDGIKVIVPIWRGDIYGNE
                     LYKSTKYHFTKLGGKVEEGINYKPHTGKFATSLHRINFIMWNQDLEKLNSLVSSAITK
                     YGEKSVGVYIIAYDEITPILIQSLNYHSLEDVRWYGSDSIAENHHLIKNIDSALFAIK
                     TNFSNPLYSLDTKSSSFNELKKEIEMKLHHTDSLIYSAIAYDSFWISALSLDRNSTDD
                     KYIDKKNNTKSFKDIVISTSESFPGISGKIELNEAGDRIGENYDFWSVSKHPQKAYYV
                     WKSESVPVETNY"
BASE COUNT         2240 a          964 c          942 g         2433 t
ORIGIN      
        1 agtatgtctt gtaggaaaag atgataaagt atctatccat tctttgagtt tagttgaatt
       61 aatttcatct aatattatat cggtttgtat tttgtagtct tgttctattc tttgtagatg
      121 taatatattg ttaagacacg ctattacaga tttattacat aatgaagtat aattatcatt
      181 ttctgcttca gctatagtaa tagaatttat gataatgtta ctggatgaaa aagtaatata
      241 taaaatagtt attatcgaaa taaataacca taacatatta tatttttgaa ataacaatta
      301 tgatctatta tatttatcat tatgctttaa tataatagtc ttatcctttt gaaatttcct
      361 tttcattcaa ttatcagact tgttaaaatt atttcaactc caattttaaa tcaaattgta
      421 ttgtttctat tttttattta tacatagatg tctaatagaa tgtatatatt agagagatca
      481 tcattgatat tccttttatt ataccaaata ataataacta ttaaaaaatt tattctaaat
      541 ttgaactgat tctatctatt attcagaaaa gtatattatc ccactttatc gaagggttca
      601 aatcccactg tgatagatac caaattgtaa tgaatctact gtttttctag aaatttcaaa
      661 atgtattttt aaaatttcga aatgtagtga ctactatctt gattaaataa aatgaatgat
      721 aaaagatatc ataaattttc tgcgcttcaa attttgatca aatataatat tgatctatgg
      781 gtttagggtg gtgttaagtt actgacttgt atcgcctcct acaatataca tcaataagct
      841 aaattttaga tgagaccctc tgataccatt gtgcatgaat acaaataatt gaatccagtt
      901 gtggacatgt gatagaatac agtcaaattt tctacaagga taacaatcat caaattgttc
      961 tgttctatcc tttacatatt caatggctct ttcaattata ctcttttcat aaggtgaatg
     1021 taaccgatgt tccaatctca aagaagtaca ggcttcagga taccaactac caccatctga
     1081 atatattata tgtctaccat atttttcaac taacgaatat agaaagtgtt cagtaacaag
     1141 catgtttcta tgtcttgaaa tgtaaacacc aagtacaact ctatgtaccg gttcaacagc
     1201 tatccataac tatgcttttg tatttcctat ttgtactatt atttcgtcta taagaaatgc
     1261 agatactctt ttacatgaat agatttgttt gggattgaac ttttgtacct attcccagac
     1321 agcaacatga cttctctgta caaatggctc tattgctctt gatacattaa gaaaacttaa
     1381 ccccagaaaa tacaaatata atccatacat aactatctca ttgaatgttt acacatttag
     1441 aagatatact taatagaata tgagaggaca ttcccagcta tacacttttt ttgcttaact
     1501 taacaggacc accattttga taagaatatt tttaaactac atatatttta taatattttt
     1561 agtgtttaac ttatctcttc aacaactaac aaagcaacaa aaggttataa ttactggatc
     1621 ttggcttgga tgggcattag atggatatga ccttgtttta atgctttttg taatttcatc
     1681 aataaatcaa ttattttttc cttcaaccga tccatccatg agtctattgg ctacctttgg
     1741 aacatatgta gtaacactaa taatgcgacc ttttggtgga gcattctttg gaaactttgg
     1801 tgataaacat ggaagaaaga aagctatgat aataacaatc acaggttttt ctttagtgac
     1861 tttctgcacc ggtttattgc cagcttggca atctgtagga cttttggcac caattttatt
     1921 gataataatt agattcttac agggattttt cgctggaggt gaatggggta gtggagccgt
     1981 aatcagtatg gaatcttcac caaaatctat gcgagggctt ctttcaggat ttgtacaaag
     2041 cggctttaca gttggtttcc tccttgcatc aatttcattt caactcactc aatttgcctt
     2101 tcctgatgat aaatttattg agataggttg gagagtatta ttctttacag gtataatacc
     2161 aggactagtg gcattgtttg taagattaaa aatggatgaa tcacaggtat ggatcaagaa
     2221 agtaaaagaa aagaagattg ctagaattcc attgaaaaat gttttatcta ataaagataa
     2281 tagaagacgc ttttttttat ctttgatagt gatgactggt cttatgtttt cttattatat
     2341 ctctataggt tttatgccta ctttattaga aaagtatgta aaattagaaa gaaaagaagt
     2401 tgcaagtatc atgattgtta ctataatatt ttccttaata ggtcatttat ttacaggttt
     2461 tattagtcaa tacattggta ggttaaaaat attaacaata tttggtattg catcactgat
     2521 agttgctata ccttccttaa atggtatctt tactgcatca aatatttttg agattgcttt
     2581 ttactcttct ttgttcgttt tctttgtatc tagtggattt ggaccaatgc ctgcattttt
     2641 agctgaaaga tttcctactg agattagaaa tagtgcagca ggcttcgttt acaatggcgg
     2701 actattagta ggttcatggg ctccgttaat agctattact ttattgtctt attttgataa
     2761 gtataacatt actcaatatt atgctgttgc tataaatgtt ataatagcgt ctattattct
     2821 tataataggt tctaaagtta atccagatac aaggaatgta gatcttggat gattaataaa
     2881 aaatgagttt gttctttaac tttttatcta gatgaaattt tttttgatac cagataaaag
     2941 aggagttcta aaatttgttt aacctatttg ttacgtagaa acattttcaa tgatgtttca
     3001 aatagaaatg aagtaaacta gatttaaatt aaattgaaga aattgataga actattggat
     3061 ataaaataac ctatatatct ttatattaat cgaactatag aaataaaatc tatttaagaa
     3121 ataaattatc ttattaacga agataaaaaa tgattattta attaaaagaa cgtttttaaa
     3181 atatcctaaa aaagttgtta acagtaaaaa agatcaaata tgttaccaga tggatctctt
     3241 gagaaaaaat agtttatact tattttattg cattaatgtt taatctaaca aagtctaatt
     3301 tccattgtaa ttcttttgca ttagtatcaa tttcctgtat tacagattta gcaaacttat
     3361 cttttagcat gtcattgggt aaatatttta aatagggaag tagaacaatt gtttttataa
     3421 aaagaaagta ttcttctttg ttaggaaatt tagcttcttt aacttccaga aagacttgaa
     3481 tattctcaaa gcctatttct tgtaatattc tttctgtatc ttcttttttg gcaaaatacc
     3541 atgtttgcct ccaaatatca tctcctttat tgttgcaaaa ataattataa aattcctttg
     3601 acctgctaac tttattgatt atggataaag tctttgtaag atttctatgc ccaccacatt
     3661 gaattaatag ctgcccatcg ggttttagaa ttttccaaaa gcattcaaat acttttttat
     3721 gatttagaat ccaatgtaat acggcatttg aaaatacaac atctactttt tctgcaagtt
     3781 ctaattgaga aatatccatt ttgataaatt caatattaga aaattttgct aggttttctt
     3841 tagcaagtct tatcatagac aaatcaaaat ctactgcaaa aactttccct tgtggaactt
     3901 taattgataa tatcttggtt aatcttccag aaccacaacc agcatcaaga actatttcat
     3961 ttcctttcca ttttctatat tctattatct cctgtcccca tgattgttgt gcatctgaga
     4021 tacgatcata cgttgtagca tcccagtgat atttcactaa tagatattgc ttaatattta
     4081 tataaagtta ttcgcaggac tttattatta aataattttt aaatgtaatt taatgattat
     4141 gaaaaaaata ataatgaatt taaagatatt attataatat agatgagtta tgaaataaaa
     4201 gaagaaagca caccaagaca taaaagaaca agagctttaa aaaatgcagt caagtaagca
     4261 gtaaaggcta tatcaaatac ttaatatagg cacccttttt ggttacttat atgattaata
     4321 tcttaacctc ttataagatt gattcggacc tacataaaga agtaattaca atgataagac
     4381 taaattctat gttcctgatg attttgaaga atgttgtgaa atgcatttgg atgatccttg
     4441 tacgttcttt gacagaaggg agacttatta atttgaaaga ttattagaca ataataaaga
     4501 gcttccgata acaggtatag aacaatcaaa aaaacttcaa gaattatatt tgttgacaaa
     4561 aaaaagatat agaaaaaaat gtaaaaattg agatataata ttactatcaa tggatctatt
     4621 aaattcactt aacataatgc ttatctttaa aaattttttt tgtttattct tcttctaata
     4681 atttgtttct actggaacac tttctgattt ccagacgtaa taggctttct gaggatgttt
     4741 agacacgctc caaaaatcat aattttcacc aatacgatcc cctgcttcat taagttctat
     4801 ttttcctgaa ataccaggaa aagattctga tgttgaaata acaatatctt taaaagactt
     4861 tgtattattt tttttatcaa tgtacttatc atccgtacta tttctatcca agctcaaagc
     4921 ggaaatccag aaggagtcat aagctattgc agaatatatt aaagaatctg tatgatgtaa
     4981 tttcatttct atctcttttt ttaattcgtt aaaactagaa gatttggtat ctagagaata
     5041 taatggatta gaaaaattgg tcttgattgc aaataaagca gaatctatat tttttataag
     5101 gtggtgattc tcagcaatac tatcacttcc ataccatctt acatcttcaa gtgaatgata
     5161 gttcagagat tgaattagga taggagttat ctcatcataa gctattatat atacgccgac
     5221 tgatttctcg ccgtatttag ttattgcact agatacaaga ctatttaatt tctctaggtc
     5281 ctgattccac attatgaaat taattctatg aagacttgta gcaaattttc ctgtatgcgg
     5341 tttatagttt attccttctt caaccttacc tcctagtttt gtaaaatgat attttgtaga
     5401 tttgtaaagt tcatttccat aaatatcgcc tctccagatt ggtacaataa cttttatacc
     5461 atcatctatc attcgttctg caattacctt tccttggttt gtatcatctg gtaccaatct
     5521 gagaagatta tctccttcta tagaaagtaa tggagaagta ctagaataac tgataagtat
     5581 aatgtcatta gcatctgcat attctttcgc agctgaaact gcactacttg ttgctggccc
     5641 aacaataatt ttggctccaa ttgaatgtaa ttgttttatt gcctcaagag aatcttctgg
     5701 acttgatttt gagtttgcaa taactagatc gaattttgat gtagaattta tactttcaaa
     5761 atatctgttt acatcattta cagctttttc tagagcaatc ttcattggtt ttcccatgga
     5821 tgaagaagaa ccagtcagtg gtacaatagc tcctaccaga aattcttctt tatgattatt
     5881 aatttgtcca atagcagaca ctaatggttt ttcagtatta tagtttacta acaataaact
     5941 tttttcacta ccattgaatc cattactaat gtagaatcca aagaacagaa cgagtgagat
     6001 agtagtagtg atagacatca aaattaactg tttagaagtt ctgtttctag tccaaacagc
     6061 aattttgaaa ataatatctt tggatttcca tttaatagaa tatcgcatgt accatacaag
     6121 acctccagca attagtaaat aatgggcaga aagtaacaaa gcagaaatcc aaagctgttc
     6181 tacaaatgtt gtaagaacta ttattgcaaa ccagctatct cctacaacaa ttgctaagaa
     6241 tcctactagc tcgcataccc atggaacaag gtgacgttta tcatttctta taccgagcaa
     6301 aattgttatg gcgagaatag ttaatatcga atttaaagtc ggataggcaa tagtgacaat
     6361 aaagagcatc aaacctctaa agtttgatgt ttcagcaaga tttaatgtca aagttaaaat
     6421 atatactagg tatagtccac ttagagccta tccgaaaagt agtttatagt ttttaagttt
     6481 atggtacaat agatttattc gacaaagcta agtgtttcta cactatatat cacgagatta
     6541 gtttgatatc tgaaatttct ggaatcgatt catcttatg
//
LOCUS       DATIAS010000221         2982 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_38624, whole genome shotgun sequence.
ACCESSION   DATIAS010000221 DATIAS010000000
VERSION     DATIAS010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38624"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..1843
                     /locus_tag="VLA74_04330"
     CDS             56..1843
                     /locus_tag="VLA74_04330"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49968.1"
                     /translation="MNNPGTSKQKVIDKLSEEGKGSRVTILNDIENLIKNGLILARKI
                     KKNSPNYNLYVNDSYYKDLIDIYNEFERYFIEIVEKIKPQIFTDNVVSNFKDDKSQNQ
                     LMILYVINTIYNHFMAMVLIHAIFNWPEMIKDDEKRNKLNTIMFTKMQKLHKAIYESF
                     RYESNKSQGSLDVPVLANTVLSWFKLNPSYLKSSIDLAKVYNLSSQMEKLLDIAWKVS
                     YPLLPFARPLFEKDDGYIESRQIKWSKQNWRPTSWKDSLKYYETGFVDSELIDIIKKA
                     SNLIDSGKTDEALKCYDQVLSIDPNNLSALNDKGYLLNKLGRYNEALEYFNKALSIDP
                     TYVDALLNKGNSLSCLNKHDKAINFYDQVLKIESTNFNASNNKGYELLILNNLIESQR
                     YLKMAFKIEPENPLILYNTGLLLEKKGDYQEALKWFAKLLDLNPNHINGLIMKANILW
                     QIGKEEESFPIFQQILKLDPQNMDALNGKGIYLMKYYKNKLDLEEALEYFNKALSIKP
                     DDINTMINKGTAYNLLGKYHESIKCFDKVLKKLPNDIRILLFKAETLLDMMKYNEAIE
                     YFDKLLSLDPSNERAKEGIIKAKKGKSEK"
     gene            complement(1860..2483)
                     /locus_tag="VLA74_04335"
     CDS             complement(1860..2483)
                     /locus_tag="VLA74_04335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49969.1"
                     /translation="MTGAPVKPDAMWTMMNQLRNRILKMLEEGSIKDVKEKEKLEYLI
                     KTKKWNPYCLRHSSISSDSDFLPEYALKKKVRWSMNSKQGLRYIKRRIGDDLKNQILV
                     RNGIISENEIKKKPSIHICPRCEFVNSIEHKLCSSCSYPLTPSAFEEMKSEEDRKLKI
                     LEEKHSQEIKSIREEMSNQFNQLISMIQQNPNLAQVKPEVLISKSKV"
BASE COUNT         1078 a          415 c          436 g         1053 t
ORIGIN      
        1 atttttaaac ctttcatcaa tataatcctc taccatgaca ggattgaaat atgttatgaa
       61 taatcctgga acaagtaaac agaaagtaat agataaatta agtgaagaag gaaaaggctc
      121 tagagtaact attctaaatg atatagaaaa tttaataaaa aatggattga tattggcaag
      181 aaaaataaag aaaaatagcc caaattataa tctgtatgtt aacgatagct attacaaaga
      241 tttaattgat atatataatg aatttgaaag atattttatt gagatagttg aaaagataaa
      301 accacaaatt ttcacggata atgttgtttc taactttaag gatgataaat cacaaaacca
      361 actaatgata ttatacgtta taaatactat atataatcac ttcatggcaa tggtccttat
      421 acatgctatt tttaactggc cagaaatgat aaaggatgat gaaaaacgaa ataagctaaa
      481 taccataatg tttacaaaaa tgcaaaaact ccataaagcc atctatgaat ctttcagata
      541 tgagtcaaat aaatcacaag gctcattaga tgtgcccgta cttgcaaata cagttctttc
      601 ctggtttaaa ttgaatccat cttatctaaa atcatctatt gatctagcca aagtatataa
      661 cttatcttct caaatggaaa aattattaga tattgcatgg aaggtaagtt atcctcttct
      721 tccatttgct agaccgttat ttgaaaagga tgacggatat attgaaagtc ggcaaatcaa
      781 atggagtaaa caaaattgga gaccaacaag ttggaaagac tcacttaagt attatgaaac
      841 aggatttgtt gattcagagc taattgatat aattaaaaaa gccagcaatt taattgattc
      901 aggaaaaaca gatgaagcct tgaagtgtta cgatcaagtt ttatctattg atcctaataa
      961 tctatctgca ttaaatgata aaggatattt acttaataaa ttgggaagat ataatgaggc
     1021 tttagaatat tttaacaaag ctttgtctat tgatcccact tatgtagatg cgttattaaa
     1081 taagggaaat tcacttagtt gtttgaacaa gcatgacaaa gcaattaatt tctatgatca
     1141 agttttaaaa attgaatcca ctaactttaa cgcatcgaac aataaagggt atgaattact
     1201 gatattaaat aatctcatag aatcacaaag atatttgaaa atggcattta aaattgaacc
     1261 agaaaatcca ttaatcctat acaatacagg attattatta gagaaaaaag gcgattatca
     1321 ggaagcgtta aaatggtttg ccaaattact agacttaaac ccaaatcata taaatggatt
     1381 aataatgaaa gccaatattc tttggcaaat aggaaaagaa gaagaatcat ttccaatttt
     1441 tcaacaaata ttaaaattgg atccgcaaaa tatggatgct ttaaatggta agggaatcta
     1501 tttgatgaag tattataaga acaaattaga tttagaagag gctttagaat attttaacaa
     1561 agcattatct atcaaaccag atgatatcaa tacaatgatc aataaaggaa cagcatataa
     1621 tcttctagga aagtatcatg aatcaatcaa atgctttgat aaagtattaa aaaaattgcc
     1681 aaatgatata agaatattat tattcaaagc cgagacttta ttggatatga tgaaatataa
     1741 tgaagctatt gaatactttg ataaattatt atccttagat ccctcaaatg aacgggctaa
     1801 ggaaggaatt atcaaagcaa aaaaaggaaa gagtgaaaaa tagaaaagaa aaaaattgct
     1861 caaactttac ttttcgaaat cagtacttca ggctttactt gtgccaaatt tggattttgt
     1921 tgtatcattg aaattagttg gttaaattga ttgctcattt cttctcttat tgacttaatt
     1981 tcttgtgaat gtttttcttc tagtattttt aatttcctat cttcctctga tttcatttct
     2041 tcaaatgcag atggtgtaag tggataagaa cagctagaac atagtttgtg ttcaattgaa
     2101 ttgacaaatt cacaccttgg acatatatgg attgaaggtt tcttcttaat ttcattttct
     2161 gaaattattc catttcttac aagtatttga tttttgagat catctccaat tcttcttttg
     2221 atatatctta atccttgttt tgaattcata ctccatctta cttttttctt taatgcatac
     2281 tctggaagaa agtcgctgtc tgaacttata gaactatgac gaagacaata agggttccat
     2341 ttctttgttt ttattaaata ttcaagtttc tctttttctt ttacatcttt aatagaacct
     2401 tcttctaaca ttttgaggat tctatttctt aattgattca tcatagtcca cattgcatct
     2461 ggtttaaccg gtgcaccagt cattatatta caaattagaa aagcgtcagg agtatttcta
     2521 aaaggatgtt catttatcca atctcttaca taaggaaaac ttgtagttaa tagtattggc
     2581 ccactacctg tttttgcttc atgaggaacc tcaccttctg catatttttc tctaaatctg
     2641 atatgtttta atttcagaat gataatttcg tggtttcttc catttaaatc ccagaataat
     2701 gttaaagctg ctttgtttct agcataaggc tcatattgta atattgataa tagttgatct
     2761 ttctcccaaa tttcactttc taagtatggt gatattcttt tgcttttttt gttctttatc
     2821 ttgataaatt ctggagtttg ccaattttca tggtcaatgt ctttctcatg attatataac
     2881 catctataaa ataatctagt ctgtagctta attcatcatt gttcactttt atgcttgaat
     2941 ttgatctggt ttttgtgttt acaatgcgat atatttattg ta
//
LOCUS       DATIAS010000222         2781 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_584198, whole genome shotgun sequence.
ACCESSION   DATIAS010000222 DATIAS010000000
VERSION     DATIAS010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_584198"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VLA74_04340"
     CDS             <1..221
                     /locus_tag="VLA74_04340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49970.1"
                     /translation="HNQQWTMTNEKSGLSLIFNGESPFKDGQLETLDGLPKGAAIPNL
                     PEAPQEFSPGLDKELKSKVQNLMKSTKS"
     gene            499..984
                     /locus_tag="VLA74_04345"
     CDS             499..984
                     /locus_tag="VLA74_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49971.1"
                     /translation="MVEKELIEQKIGEAIGLEKAAQKAVEELKSKGLLKPEHEKKLMP
                     IKEEANKQQKEMEELIEEIAENEGFDVQNINSVSKETAQKVSKIMETYLGEDPDTQEA
                     LEFLCLAEGAEVTHYEVLSSVAKEVKSRKFGTQVRKILKEEHNHLEVCTKLAKQNVSK
                     E"
     gene            complement(1589..2002)
                     /locus_tag="VLA74_04350"
     CDS             complement(1589..2002)
                     /locus_tag="VLA74_04350"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF49972.1"
                     /translation="MPINYKSKSILLVDDESDIVNLFKDLLENKNCEVTGFTNPLEAL
                     EHYKTNWKRYGLAISDIRMPGMTGFDLLKNFKKIDATISFFLMSAYDVIEFSELEGIK
                     IDGFIQKPIRIKELLSTIEKHLINIPISSSYSRNN"
     gene            2509..>2781
                     /locus_tag="VLA74_04355"
     CDS             2509..>2781
                     /locus_tag="VLA74_04355"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSF49973.1"
                     /translation="MSARADKSAVPVLSDVDKKILKILLVPDGNIPSSTIATKLGIPI
                     STIRRRRRRLENEFLKTYHVLDIEKFGWRRVDFFISIKNGKANTVAN"
BASE COUNT         1051 a          370 c          428 g          932 t
ORIGIN      
        1 tgcataatca acaatggaca atgacaaatg aaaagtctgg cttatcttta atatttaatg
       61 gagaatctcc atttaaagat ggccaacttg aaacattgga tggacttccc aaaggagcag
      121 caataccaaa tctaccagag gcaccacaag aattttctcc tggacttgat aaagaactaa
      181 aatcaaaagt tcaaaatcta atgaagtcta ccaagtccta gggcaatgaa aacttataag
      241 taaagaatga tggataaaat gagacttaat ggctcacaag cgtgtaaagt gtagcagtag
      301 ataaaattag tctcgaaata aattccatat tattccttat tttttgttat caaaattata
      361 tttaagttgt agtatatagg ataatttttc actttaaaaa atttctaata cttgtaaata
      421 agttctctga taattattat tatatcattt attaatatcg ttataaactt tattgcaata
      481 ttaacaatga aaatatagat ggtagaaaaa gaattaatag aacagaaaat tggtgaagca
      541 attggtcttg aaaaggcagc tcaaaaggct gtagaggaac taaaatcaaa agggttgtta
      601 aaaccagagc atgaaaagaa actaatgcct atcaaagagg aagcaaataa acaacaaaaa
      661 gaaatggaag aattgattga agaaattgca gaaaatgaag gatttgacgt tcagaatatt
      721 aattctgttt ccaaagaaac tgctcaaaaa gtatcaaaaa ttatggaaac ttatctagga
      781 gaagaccctg atacacaaga ggctttagaa ttcttatgct tagctgaagg tgctgaagtt
      841 actcattatg aagttctttc ttctgttgca aaagaagtaa aaagcaggaa atttggaact
      901 caagttagaa agatattgaa agaagagcat aatcatttag aagtatgtac aaaattagca
      961 aaacaaaatg ttagtaaaga atagcatgta cgatattgct ttgtgattga taatgatggt
     1021 ggtcgaaaaa tagagtttga gcgataataa aataaacaaa tgtcttaact gtagttgtct
     1081 ttaaacaata attattacag tactaatttt tgttctggac aatgtaaaga tgcttacata
     1141 agacatataa ccggataaat gcctaaaaaa aatttttaat atttacattt ttctacacta
     1201 gcaagcaaac aagacaggta aattataatt gctagtatct atacaatttt ttaactcttt
     1261 aagagtagat tttttgccat ccaggccatt ttatatagaa ataaaggagt taacttcttg
     1321 atgaatacac aatttgtaaa aaatgtagtc atatatgaaa aaaccactta ttttatcaag
     1381 gtgacgataa atgtacaaaa tgtgattgta atcaatttat agaataattt atcaactgat
     1441 ttttgacacc tgtttcaaaa aagaaaacag ggaactgaat aatgtcttcc aagtataaac
     1501 ttaaagggtc ttacaaagaa attggcagtt ggtttgtttt aagggaaaac taatttcaag
     1561 cttattggat taagacaaaa tgtaattgct aattatttct actataactt gatgaaattg
     1621 ggatattgat taaatgtttt tcaatggtag ataataattc ttttattcgt attggttttt
     1681 gtataaatcc atctatcttt ataccttcta gctcagaaaa ctcgatgaca tcatacgctg
     1741 acatcaaaaa gaatgaaata gtggcatcaa tttttttgaa attctttagc aggtcaaatc
     1801 ccgtcattcc aggcattcga atatcagata ttgctaatcc atatcgcttc caatttgttt
     1861 tgtaatgttc taatgcctct agtggatttg taaaacctgt cacctcgcaa tttttatttt
     1921 caagtaaatc tttgaaaaga ttgacaatat cagactcatc atccaccaat agaattgatt
     1981 ttgacttata atttattggc attattttat tttcctagtt tgttgattat tgtgaaactt
     2041 gcgcaaagat aacgagtact caaattttta ttgactagaa aaagaattaa tgaaataacg
     2101 ttttgatgca atacatcttc atccctatta tattaccttt actcgggtat aaatggctac
     2161 aattcaaaga ttactgattt cttgttcaat aaatcataaa tcggcttaaa tatggtaaat
     2221 aaaaaccaaa tttcttatag aatgtagatg aaatatcaat agtttatcat ttattatgca
     2281 gtatttttgt tatctttatc tttatctttt taatttattg aattactaat ctaataaaag
     2341 aacaataaca ttttgtttat tctatgatat tatatgtggt atggaatgga tgtttctatt
     2401 cacacctata ctgctgtttc tatccaaact catctactcc gtgtatttat ttaatatatt
     2461 tttgccgaaa ttattatata tattagagtt ccaatattta gataataaat gtctgcacgt
     2521 gcagataaat ctgctgttcc tgttttatcg gatgtagata aaaaaatatt aaagattctt
     2581 cttgtaccag atggtaatat accatccagc accatagcaa ctaaactagg aattccaata
     2641 agtacaataa gaagaaggcg cagaagattg gaaaacgaat ttttaaaaac ctaccatgtc
     2701 ctggatattg aaaaatttgg atggagacgt gttgattttt ttatttccat aaagaatgga
     2761 aaggcaaata ctgtagccaa t
//
LOCUS       DATIAS010000223         4017 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1130388, whole genome shotgun sequence.
ACCESSION   DATIAS010000223 DATIAS010000000
VERSION     DATIAS010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4017
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1130388"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VLA74_04360"
     CDS             <1..255
                     /locus_tag="VLA74_04360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49974.1"
                     /translation="DQLEEHGFIHKSVIHSQKEYANGNVHVNNCECRSNLYQLWIRKF
                     MGVNKTNTIYRYTPKHSSLFITIEPRQENKDLWKFFSVGS"
     gene            complement(777..1841)
                     /locus_tag="VLA74_04365"
     CDS             complement(777..1841)
                     /locus_tag="VLA74_04365"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSF49975.1"
                     /translation="MQITTEVEEINVNPVLNFFFALKAPESKRQYPKRFEKFLDYLKL
                     EGTFEEKALSFYNKAIENPQWLTNKLVEFAQYQKQRAQTGEISESTIPNYFKAIKLFC
                     IMNDIIVNWQKLNKGIPRGKSAAEDRAPTIEEIQKLLEYPDRRIKSIVLIMISSGIRV
                     GAFETLRWKHITPITDETGNIVAAKMTVYPGDKEEYFTFITPEAYNAVKEWMDFRESF
                     GEKINRDSWIMRDIWQTTNVKYGAKWGLATMPKQLQSSAIKRLIDRALWEQGIRHQLK
                     NGERRQEFKTVHGFRKFFKTHCEQVMKSINVEILMGHTIGVSDCYYKPSEKEILNDYL
                     KAINVLTINKNNNNAIIERD"
     gene            complement(2014..2742)
                     /locus_tag="VLA74_04370"
     CDS             complement(2014..2742)
                     /locus_tag="VLA74_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49976.1"
                     /translation="MNNKIVLTKKSSTIFLAIVLVVGTIAAIFPSFMIYAQAEVPDFV
                     MDMIESEYSSNNNDYENEYIADEKEYTNSYDDERNNGQYGKTYYNEESYSHDDDSYDD
                     GMYSKYPTTKDKKFVCKTGQFEGFFVKSPEFCDLVIPEGPQGKQGPPGITQINSSNFY
                     TVFGNLITIPEGGDFALSRASCDAGDTAISGSYSLNANPDSPNLIRQFKQDSIDTWAT
                     SIDGTPGTSLQTRVHCFDNPPLRP"
     gene            complement(3133..3522)
                     /locus_tag="VLA74_04375"
     CDS             complement(3133..3522)
                     /locus_tag="VLA74_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49977.1"
                     /translation="MIKEKYNIILTIPLLFSAILLVTSTITASASITNYFKDKDEDDY
                     ENKFYREKYKEKIYRQGALCDEPQSIKKHGEICKGYGNSFEYAKAECKDKGGEWNDGK
                     CKFENDEDETDFEDEFEEEEDVEEDDD"
BASE COUNT         1290 a          627 c          529 g         1571 t
ORIGIN      
        1 gaccagctgg aggaacatgg cttcatacac aaaagtgtaa tccattcaca gaaagaatac
       61 gcaaatggta atgtgcatgt gaataactgt gaatgcagaa gcaacctgta ccagttatgg
      121 ataagaaagt tcatgggtgt aaacaaaaca aatacaattt acaggtatac tccaaaacat
      181 tccagtttat tcataacaat agaaccaaga caagagaaca aagatttatg gaaattcttt
      241 tctgtaggta gctgaaacat ttagaaataa gagcgattta tttaaataat gttgtctaat
      301 atcgattaaa ggttctgttt ggagttcttt ggactgaaaa accaaactag aggccatgta
      361 tcttacatga gcctcaatga acctcttcct tttgttactt tgatagctta actatatcca
      421 taatatatta ataaaaaatt cattaattgt taaatcaatt tttaaataat ttgataataa
      481 taaaaactat atagaagata ataatatctc aatagaaact cttatttttg caccgctatc
      541 ggtattactg tctcctagat atatttcatc ttttatatta atatcaatac ttacctatct
      601 attcacattt cataatgaat tattatattt atgattagga tctttggttt ttcaatttat
      661 ttatttcttc tataaggtac ataactctgt cagataaagc agtaattgca tcatctcgct
      721 cttgtagttt tgattgttta acatattcat tattttcatt cttttctttt aattgtttaa
      781 tctctttcta ttatcgcatt attgttattt ttatttattg ttaaaacatt aattgccttt
      841 aaataatcat taagaatttc cttttcagaa ggtttatagt aacagtcaga gactcctatt
      901 gtatgcccca ttagtatttc tacatttatt gatttcatta cctgttcaca atgagtttta
      961 aaaaactttc taaagccatg aactgtttta aattcttgtc ttctttcccc attttttagt
     1021 tgatgtctta ttccttgttc ccataatgct ctatcaataa gacgtttgat tgcgctactc
     1081 tgaagttgct ttggcatcgt ggccagaccc cattttgcac catatttgac atttgttgtc
     1141 tgccatatat ctctcataat ccatgaatct ctgtttattt tctctccaaa agattcacga
     1201 aagtccatcc attcctttac tgcgttatac gcttccggtg ttatgaatgt aaaatattcc
     1261 tctttgtcac ctggataaac tgtcattttg gccgcaacaa tatttcctgt ttcatctgtt
     1321 attggggtta tatgcttcca tcttaaagtt tcaaatgcac caactcttat tccagaagaa
     1381 atcataatta aaacaataga ttttatcctt ctatctggat attccaataa tttttgaatt
     1441 tcttcaattg ttggtgctct gtcttccgca gcactttttc ctcttggtat tcctttattt
     1501 agtttctgcc aatttacaat tatatcattc attatgcaaa agagtttaat ggctttaaaa
     1561 taatttggaa tagttgattc agaaatctct cctgtttgtg ctcgttgttt ttggtattgt
     1621 gcaaattcaa caagtttatt agtcaaccat tgaggatttt ctatagcttt attatagaag
     1681 gataaagctt tttcttcaaa cgttccttcc agtttaaggt aatctaaaaa cttttcaaat
     1741 ctcttaggat attgcctttt tgattcaggt gcttttaagg caaagaaaaa gttcaaaaca
     1801 gggttaacat tgatttcttc aacttcagtt gtaatttgca caatattgta ttggtctggg
     1861 ccaatataaa cagacagata tgtcttgggc ccagagggat ttgaacttta ctaataatca
     1921 ggttcaatat actttttaaa acttatatat ctatagaata ggcaaataat aaaactaaac
     1981 tattagttta aataaaaata aaaagctgag gggttaaggt ctcaagggtg ggttgtcaaa
     2041 gcaatgtacc ctcgtttgaa gtgaggtacc aggtgttcca tcaatagatg ttgcccaagt
     2101 atcaatgctg tcctgtttga attgacgtat aaggttgggg gaatcagggt ttgcatttag
     2161 ggaatatgaa ccacttattg ccgtatctcc cgcatcacag gaagcacgtg aaagagcgaa
     2221 atcgccacct tcaggtatgg ttataagatt accaaatacg gtatagaaat tactggaatt
     2281 aatttgagta attcctggtg gaccttgctt accctgtgga ccttctggaa tcaccaaatc
     2341 acaaaactct ggtgacttta caaagaatcc ttcaaactgt cctgttttac atacaaattt
     2401 cttgtctttt gttgttggat atttgctata catgccatca tcataggaat catcatcatg
     2461 tgaatatgat tcttcattat agtatgtttt gccatattgt ccattatttc tttcatcatc
     2521 ataactattt gtatattctt tttcatcagc aatatactca ttctcataat cattgttgtt
     2581 tgatgagtat tctgattcaa tcatgtccat tacaaagtct ggtacttcag cttgtgcata
     2641 tatcataaat gatggaaata ttgcagcaat tgttcctaca actagtacaa ttgctaaaaa
     2701 tattgtacta cttttttttg ttaatactat tttattattc aatatttaaa tacattatac
     2761 tttattatat ctgaaatgcg ttacatgaat caagactttt tgaaaataag aattagatag
     2821 ctcttttttt tgaaaaataa tctaataaga tgaataatat acacatatag agaaaattat
     2881 tataacattc attacatata gataaagttt aaaagttatt atattatact aaagtgaatc
     2941 tttaatatag tagagttata ctattgtctt ttatttaatt attattatta tttttattat
     3001 tattagaaac ttatttttaa taagaagatt gtagattaat agactaatgt ttataggttc
     3061 tgtggagtca tacaaaaatt tcaatacaat ctaattttat aaattgtaaa tctattaaaa
     3121 taataaaata aattagtcat catcttcttc tacgtcttct tcttcttcaa attcatcttc
     3181 aaaatctgtt tcatcttcat cattttcaaa tttgcattta ccatcattcc attctcctcc
     3241 cttatcttta cattccgctt tagcgtattc aaaagagttt ccatatcctt tgcatatttc
     3301 tccatgcttt tttatagatt gtggttcatc acacaaagca ccttgacgat atatcttttc
     3361 tttatacttt tctctataaa acttattttc gtaatcatct tcatctttat ctttaaaata
     3421 attggttatt gatgcagatg ctgttattgt tgatgttaca agtaatatgg ctgaaaaaag
     3481 taatggtatt gttaatataa tattatattt ttctttaatc attataatat aatattaata
     3541 taaaaaatag ataattaacc tttttcaatt atatatgcta tttatatttt agaatataac
     3601 ggataaatgt taggaatata gtagtcttta tagatagtaa taggattcta ctgctactac
     3661 caaatattta gcttttatta ttagaaactt aatttagagt gttttaaatt attatatata
     3721 ttaacaaaag taaattatga tatataaaaa accaatttca taattaatac tatcagtatg
     3781 acagacgatt gattctgtca tactcaaact tatattcaat gatatattta gcttttttta
     3841 tccatatacc cctaacaatt aagcatcatt aaaactgaga aacgattctt tagttttttg
     3901 atttcttctt tctttcataa accacttgaa ataatctgtt tttgcctcaa gtcttgaaag
     3961 tttacaatta cataatttct cagtacagtg atgaggaatt ctaatcttgt gtctgcc
//
LOCUS       DATIAS010000224         3138 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1403467, whole genome shotgun sequence.
ACCESSION   DATIAS010000224 DATIAS010000000
VERSION     DATIAS010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403467"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..460)
                     /locus_tag="VLA74_04380"
     CDS             complement(<1..460)
                     /locus_tag="VLA74_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49978.1"
                     /translation="MKLLFVRLLIPILFIIILSWNGIITVAATTTEATRSTFDIFTID
                     SSPYGTPYSECVAKWWTWWVGIPIDKHPVKDYYDSERCSVMQSGPVWFLPDIIPGEGK
                     INYNCNVPLGKAIMLPITTTFCDNSTEGPMTDIEIVECADNILTPLNNMKV"
     gene            590..1954
                     /locus_tag="VLA74_04385"
     CDS             590..1954
                     /locus_tag="VLA74_04385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49979.1"
                     /translation="MQLSKILKYLLGSTSIIIGIGFVVVLLHIVDMSAGDTWALHMND
                     RSSFQHITIYFIITVTSLIIQAFLLMVSVKLAFKTKKAISQLSLIIRYLYVASHIAVM
                     SSIVYLLLEQIVTSRYHTVLLELIVALSLIPSVLILISLAYTSLKSFSSTRSKVVMVY
                     GIAIIAITVQLIIAFCYIEINLHSKPEIITPDRNPWASYFYTDLQSKISLIYEVSEAI
                     SFIIIWIALILLTKQYIKKIGKVKYPITLSIPMIYFLLQYSPLLLEQLGTLSFLVMAE
                     GSLFLYIYNFILNTVNIGTGILFGISFYLLARSLAYYDLKYYLIICGTGIMIIFSSGV
                     STIVTLAPFPSWAIVSLSFVLPASFLFLIGLDSAIYYIASDTLIRRYLYRHMDQFELF
                     QALGYTKASDIIEQKIRKQLDNLKDKTFFKPLSELEDTKQYIEKVIVEMKQSDTKMGN
                     SKSD"
     gene            complement(2339..3031)
                     /locus_tag="VLA74_04390"
     CDS             complement(2339..3031)
                     /locus_tag="VLA74_04390"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSF49980.1"
                     /translation="MAEPIKAAIITFDDGMLSQHNYAKPILDKFNFKASFYIICNNVD
                     KENRMNWNNIQTLEEEDFEIGSHSMNHKKLSKLSEEEMDYEIIESKICLQDNGLKVTS
                     FSFPYNDGDDNKKILKIIADNYYIARTASEPLMLFQYKDEEYEDFIVNYDDKYKNQCY
                     HYSIKNNEEEYFKKYTITCLSHEAYKKSGGYSDEEMYEQFIDIVESQTKYNTENTIGA
                     IPILIYHSVDYF"
BASE COUNT         1070 a          466 c          430 g         1172 t
ORIGIN      
        1 taaccttcat gttgttaagg ggagtaagaa tattatcagc acattctact atttctatat
       61 cagtcattgg accctcagta ctattatcgc agaaagtcgt tgttattgga agcataatag
      121 ctttaccaag tggaacattg caattataat tgatcttacc ctcacctgga ataatatctg
      181 gtaagaacca tacaggacca ctttgcatta cagaacatct ttcagaatca taataatctt
      241 ttactggatg tttgtcgata ggaataccaa cccaccatgt ccaccatttt gctacacatt
      301 ctgaatatgg agtaccgtaa ggcgaagaat ctattgtgaa tatatcaaaa gttgatctgg
      361 ttgcttctgt agtagtagca gcaacagtaa ttattccatt ccaactgaga ataatgataa
      421 acagaatagg aattaataga cgaacaaata acaatttcat atctagcata atcttgccta
      481 tgatttaatt ctttattaaa tagtcttttt ccttatctga actgtgtttc tttttttcca
      541 taaaagtttt tacagtatta tgttctcagt attaaggatt agctgagtat tgcaattgtc
      601 aaagatccta aagtatcttt taggttcaac aagtattatt attgggatcg gatttgtagt
      661 tgttcttctt catattgttg atatgagtgc aggtgatact tgggctttgc acatgaatga
      721 ccgtagttca tttcaacata taacaatata ttttataata acagtgacat cactaattat
      781 ccaagctttc cttcttatgg tctctgtaaa gttagcattt aaaaccaaga aagcaatctc
      841 acaactatct cttataattc gatatcttta tgtagcttca catattgcag taatgagctc
      901 tattgtgtat ctattgctag aacaaatagt aacatctaga tatcatacgg ttttactcga
      961 attaatagtt gcactaagtt tgataccatc agttttaatt ctgatctcac tagcatatac
     1021 aagtcttaag tcattttcat caactagaag taaagtcgtt atggtgtatg gtatagctat
     1081 aattgcaatt acagtacaat tgattattgc cttttgttat atagagatca atcttcatag
     1141 caaacctgaa ataataactc ctgataggaa tccatgggca tcctatttct atacagatct
     1201 acaaagtaaa atatccttga tttatgaagt tagtgaagct atatcattta ttataatatg
     1261 gatagctttg atattactta ctaaacaata tatcaaaaag atagggaaag taaaatatcc
     1321 tataacattg agtattccga tgatatactt tctacttcag tattctccac tattgttaga
     1381 acaattagga acattaagtt ttcttgttat ggcagaagga tcattattct tgtatattta
     1441 caattttatt ttaaatacag ttaatatagg aacaggaata ttatttggaa tctcatttta
     1501 cttattagct agatctctag cctattatga tttaaaatat tatctaataa tatgtggtac
     1561 tggaatcatg attatcttta gtagcggtgt ttcaacaatc gtaaccttgg ctccatttcc
     1621 atcatgggct attgtttcgc tttcatttgt cttgcctgca tcatttctat ttttaattgg
     1681 acttgattca gcaatatact atattgcaag tgacactttg atacgcaggt atttatatag
     1741 acatatggat cagtttgaat tattccaagc tctgggttat acaaaagctt ctgacattat
     1801 tgaacaaaag atacgtaaac aactcgataa tctaaaagat aaaacatttt ttaaaccttt
     1861 atctgaattg gaagatacga aacagtatat cgagaaggta atagtagaaa tgaaacaatc
     1921 tgatacgaaa atgggtaatt caaagtcaga ttaattttcc gatcaagtta ggaaataatt
     1981 tatgtacata caaagtaata attatcaatt gtatctactt taaaaaataa cttgtgaggt
     2041 gggatattaa ttagatacca ataaacttat tagtaacata aaaatgaaag gtttgaattc
     2101 ttattataac atggttcagt aacataataa taaaagttat tgttatcaaa ataggactca
     2161 ccatattcga tgaatttgca gtcattatct gaagaataat aacctaattt aatatccttt
     2221 gatatgtaat ccttcttcat catatacaat atccttcata tgaaaaattt tatatctatt
     2281 ctcaaacaag tattccattt ctttttcaaa taaatctgga tttatattat aatcatcatt
     2341 agaagtaatc tacactatgg taaatgagaa tcggaattgc tccaattgta ttttcagtat
     2401 tgtatttggt ttgactttct acaatgtcta taaattgttc atacatctcc tcatctgaat
     2461 atccaccaga ttttttatat gcttcatgac ttagacaagt tattgtatat tttttaaaat
     2521 attcctcttc attattttta attgaataat gataacattg atttttgtat ttatcatcat
     2581 aattaacaat aaaatcttca tattcttcat ccttgtattg aaataacata agtggttcag
     2641 aagcagttcg agcaatatag taattgtcag caataatttt tagtattttt ttgttatcat
     2701 ctccatcatt atatggaaat gagaaactgg ttactttcag tccattatct tgtaaacata
     2761 ttttggattc aataatttca taatccattt cttcttctga taatttgcta agttttttat
     2821 gattcataga atgagagcca atttcaaaat cttcttcttc aagtgtttga atattattcc
     2881 aattcattct attttctttg tctacattat tacaaattat atagaatgat gccttaaaat
     2941 tgaatttatc taaaattggt tttgcataat tatgctggct taacattcca tcatcaaatg
     3001 ttatgattgc tgcttttatt ggttcagcca aggtataaga catcaaaata gatgtaaaag
     3061 aaaataatat tattgtaatt aacaatgatg ctattattaa ccaatacatc taaaaatttc
     3121 aaaaagaggc taaaatat
//
LOCUS       DATIAS010000225         3425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_449515, whole genome shotgun sequence.
ACCESSION   DATIAS010000225 DATIAS010000000
VERSION     DATIAS010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449515"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(917..1093)
                     /locus_tag="VLA74_04395"
     CDS             complement(917..1093)
                     /locus_tag="VLA74_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49981.1"
                     /translation="MSSRQKEAEIISEILLKAANEPEFRNVLIKDSSSVLEKYDISNE
                     AKYIIKKSIIDLTQ"
     gene            1148..2485
                     /locus_tag="VLA74_04400"
     CDS             1148..2485
                     /locus_tag="VLA74_04400"
                     /inference="COORDINATES: protein motif:HMM:NF014661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HSF49982.1"
                     /translation="MIRTCEDSFLKLDLKSQKKWTVNGTSRTIPVEKTLQQFSHLAKE
                     IGLTRLADITYMDKLYIPNYSSVLPGTEDYIWVYSGKGPTKAHAKASAIMESIERYSS
                     LPSSFTKKMFRGTFKELSSRYNILHPEELVEPLSYDFQDTMVMDYVEGFDIINRENVL
                     VPSSLALFRYNPSYPAVNPFAFHHTNGLASGNVFEEAVCHSLCEVIERDAVSLAELRC
                     SAIPFHLLYNLSNNLRNNGFDVKIISKNDFIDDYGIFPDVDISDVHFQPIMNLVQRFK
                     KHDIRLITKNVTSDLEIPTFNVACVEWVSDNYGYLAEGHGTHPDKRIALLRAITEASQ
                     TRAANIQGARDDLRKIKYGQNNSDDTSSWQFMPSKDRVEFSKIITYQNDDILDDINLI
                     ISRLKKVGLNRAIIIDLTNNKLKVPVVRAIVPGLETFKFTKSMMGWRARRNFK"
     gene            2482..3138
                     /locus_tag="VLA74_04405"
     CDS             2482..3138
                     /locus_tag="VLA74_04405"
                     /inference="COORDINATES: protein motif:HMM:NF019429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfuA-like protein"
                     /protein_id="HSF49983.1"
                     /translation="MSIPIVFLGPSLSIEKARKIINAEFLPPAKKGDFIKLSLTSEKK
                     IIILIDGVFLQDYPPTPIEVFQVVNKNNFQVYGASSLGALRAVELEKFGMNGYGRVFE
                     LFKKDIINSDDEVAVTFDNSYNLLSEAMIDIRYNLFLAFKKGIIAKETKQLITRTAKK
                     IYFPFRSYENIVKKSIELYSDRRDTIEDFHNFVSTQRQSLKELDAMGILKKIADNPHD
                     "
     gene            3233..>3425
                     /locus_tag="VLA74_04410"
     CDS             3233..>3425
                     /locus_tag="VLA74_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49984.1"
                     /translation="MSSKNIDRIIELREYCKKLLELSLNMRYVCITNEFGRTLAGKMK
                     SGLVPLLRPEEARNEFFLHS"
BASE COUNT         1182 a          505 c          581 g         1157 t
ORIGIN      
        1 attgttctaa gcgatttttt aaaactttaa attacaagat ccttgcaccg gaaacttatc
       61 gcttaatttg gttacagata atggttatac tgcctaacaa taattcatag acctaaaaag
      121 atagtttgtc acgtgtgcat ataatatttc gttgtataac acaaactagt tgatctttta
      181 gggattcaag tgtaggttaa tagttaaaaa gtatattgta tttgtcctgt cgccagtatt
      241 cttcttgaca atataattga catttttact tatgaaaata atctcagaat ccctcaaaag
      301 atgtctattg agatcacatg aatatgccgg ttagtacatt gcacatgttt gatataggtg
      361 ttttgcatat ttgtatcttt cttttgatgc ccgcaaacgt gcgaaaaata taagattctt
      421 ttatgatggg ttttagtcgt tttcgatgtt atggatatat cggacaaata atgtgaaggg
      481 ttttaataat tattttttac atttgtttta actgtttaag aattttataa tttcaatgtt
      541 atttcttctt ttataaaagg aaaaaatatt ctccaaaata atttccaata tctctaataa
      601 ttattttata cttctaatta taacctttag tgccttttaa gcatatggtt gaattaggaa
      661 gaaataacaa tgattcatat attcgttgat acgtcttaaa ggcaaccccg tttaaaaaac
      721 gctaggagga ttacaccaag tgtgtaaggc tatctgtgaa tagttgtgag tcagaggcgg
      781 ggtacactca tgatgtgttt atatttatct aactaattat ctcatcttgc cttcataaat
      841 caattttatg ttatttattt ttagagataa ttaaaagtcc aatctttaga acaaagcttt
      901 cttcaacctt ttattattat tgtgttagat ctatgatact cttcttaatt atgtattttg
      961 cctcattcga aatatcatat ttttctagaa ctgaagaaga atctttgata agaacattcc
     1021 gaaactccgg ttcattagca gccttcagca gaatctcact aattatctct gcttctttct
     1081 ggcgagaact caaactattt taattttggt gaatgtaata tatattctta atgcataatt
     1141 cgtaagcttg ataagaactt gcgaagatag ttttctcaaa ttggatctaa agagtcaaaa
     1201 aaaatggacc gtaaacggaa catcgagaac gattcctgta gaaaaaactc tccagcagtt
     1261 ctcacatcta gctaaagaaa tcggtcttac aaggttagca gatatcacat acatggataa
     1321 attatacata cccaattatt catctgttct acctggaact gaagattata tttgggtcta
     1381 tagtggcaaa ggtccaacta aagctcacgc taaagcgagt gcaataatgg aaagtattga
     1441 aaggtattca tcgttaccaa gttcctttac aaaaaaaatg tttcgcggta catttaaaga
     1501 attatccagt agatataata ttttacatcc tgaggaatta gtagaaccac tatcatacga
     1561 ttttcaagat actatggtga tggattatgt tgagggattt gatataatta atagagagaa
     1621 tgtactagtc ccttcttctt tggcattatt tcgatataac ccttcatacc cagctgtcaa
     1681 tccctttgcc ttccaccata cgaacggatt agcttctggt aacgtatttg aagaagctgt
     1741 ttgtcattca ttgtgtgagg taattgaaag agatgccgtt agtctagcag agctaagatg
     1801 tagcgctatt ccatttcatt tattatataa tctttccaat aatttaagaa ataatggatt
     1861 cgatgttaaa ataatttcaa aaaatgattt cattgatgac tatgggatct ttccagatgt
     1921 tgatatttct gatgttcatt ttcagccaat aatgaacctt gtacaaagat tcaaaaaaca
     1981 tgatattcgt ctaatcacga aaaatgtaac atcagatctg gaaattccaa cgtttaacgt
     2041 agcctgtgtg gaatgggtat ctgacaacta tgggtatttg gctgagggac atgggactca
     2101 tcctgacaaa agaatagctc tattgcgagc tattacagaa gcatctcaaa ctagggcagc
     2161 aaatatacag ggagcaagag atgatttaag aaaaataaag tatggtcaaa ataattcaga
     2221 tgatacatct tcatggcaat ttatgccatc taaagatcgt gttgagtttt ctaaaattat
     2281 tacatatcaa aatgatgata ttcttgatga tataaattta ataatatcta gattaaagaa
     2341 agttggtctt aacagggcca taataataga tcttactaat aacaagttaa aagttcctgt
     2401 ggttagggca attgtacctg gtttggagac atttaaattt acaaaatcga tgatgggatg
     2461 gagagcaagg agaaatttta aatgagtatt cctatcgttt ttttgggtcc cagtctttct
     2521 atagaaaaag caagaaagat aataaatgca gaatttctac cacctgccaa aaaaggtgat
     2581 ttcattaaac taagtttaac atcagaaaaa aagataatta ttttaataga tggtgtattc
     2641 ttacaagatt atcctcctac tcccatagaa gtatttcagg tggtaaataa aaacaatttt
     2701 caagtatacg gcgcctccag tcttggggct ttacgcgcag ttgaattaga aaaatttgga
     2761 atgaatggat atggacgggt ttttgaacta ttcaagaagg atataataaa ttcagatgac
     2821 gaggtagcag tgacatttga taactcttat aaccttcttt cagaggccat gatagatata
     2881 agatataatc tatttcttgc ttttaaaaaa ggaataattg ctaaggaaac aaaacagcta
     2941 attactagaa ctgcaaagaa aatttatttt ccgtttcgga gttatgaaaa tatagttaag
     3001 aaatctattg aactctattc tgatagaagg gataccatag aagactttca caatttcgtt
     3061 tctactcaaa ggcaaagcct caaagaatta gatgcaatgg ggattttaaa gaaaatagcc
     3121 gacaatccac atgattaata gatttaaact attaacacat ttagatcatg ttttcttcga
     3181 taatgaaatt tttataaaga tattttagat tcttattctt aatacaaaga gtatgagcag
     3241 caaaaatata gacagaatta tcgaactaag agagtattgt aagaaattgc ttgaattatc
     3301 gttaaatatg cgttatgtgt gtatcactaa cgaatttggc agaacacttg ctggcaaaat
     3361 gaaatcagga ctggttccac tattgaggcc tgaagaggca agaaatgaat tttttcttca
     3421 ctcaa
//
LOCUS       DATIAS010000226         4724 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_585605, whole genome shotgun sequence.
ACCESSION   DATIAS010000226 DATIAS010000000
VERSION     DATIAS010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_585605"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            761..2866
                     /locus_tag="VLA74_04415"
     CDS             761..2866
                     /locus_tag="VLA74_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49985.1"
                     /translation="MSKKEVYIQNIDRPMNIYNYASFKYESSPSLPDAIEIDYDMLVS
                     SIQESTDSGEIISPLRSIKSGCYLLRYTPLSIGRGLLTAHYDGTLRIQLDGTNIIASG
                     DLYLHQISSSFASPVNAEPNPSQGIPIFSRSNYRYYIQVVRLQRSLTNTIIIFKQYRY
                     EHLNKWINEGTFKVIMARIPAPIGFPSSSDYFTGPITNSTGTIVGNLTMGWISKYFRR
                     ATIEIDRSSASEAPLDNGSGIDWRSVFNLVGWDVTIIQSSSSVSEPSGESWSDAELHS
                     KMLSMRDSSDLDTNWRYHILCVRKLDSTSRGIMYDNSGTDSNNIPREGVGISSHWVIP
                     NINQWGLVKGLRFGIAFAPYFRTALHEIGHAMGLYHNTIDNGIMNTTDTIANNAVAPI
                     QFPNNIQWSHAPDDQNRLRHLPDLWVRPGGIPFGSTYPSVIPDDLILEDQSLEMKVFP
                     ELETVPFGAPVRVNFSLLNNSDEPRIIPNELSLKKGNISGKVIDPSGTERTYLSIILC
                     LDEEETSAIGKGESRDGSITLLRGVQGALFPLAGVYKIVVEASWEINGLKQRSIGATN
                     VMVTPPVDDEHAKAAYKIMSNPDSLLVLVIGGDHLKEGIDAIQSGLENPILRPHYEVI
                     EAKRLSKKFGKRQPDIKLASKIITKKTIMSSTEAESLSKTIKDVKNDASSDIIKKINE
                     VLKSRVENGSTTKRERKKK"
     gene            3080..3403
                     /locus_tag="VLA74_04420"
     CDS             3080..3403
                     /locus_tag="VLA74_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49986.1"
                     /translation="MSGSSNEHNIIIGKWTKITNSECSNLYPDNLEFKERGIYRGFKG
                     LDKKEFTIWDAGSYEIIDNNQMKISTANDAEILYNFSIHDNTLEFLDENRCKFRYQKE
                     SNKSS"
     gene            complement(3707..4138)
                     /locus_tag="VLA74_04425"
     CDS             complement(3707..4138)
                     /locus_tag="VLA74_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49987.1"
                     /translation="MNYISKSIMLNLIFLILSTSSLTIMLSLFYSFSIGISYALSSLS
                     FDDNTTDSNLDCIEKENTYIITLNEFIGSVNLKHTLDELVYKLNSSGIKIVNVLENTG
                     IIIIEPVDNKIFYKISNELKNDVRVKSIEKSGCVTTSNPNN"
     gene            4500..>4724
                     /locus_tag="VLA74_04430"
     CDS             4500..>4724
                     /locus_tag="VLA74_04430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49988.1"
                     /translation="MLDYARLSRKPVLFRSFTGLDLSEFDSLYEEIESKYKEYEIKRL
                     SKRKRTRPVGTGGRHFKYPVRDRLLMLLVYY"
BASE COUNT         1726 a          684 c          784 g         1530 t
ORIGIN      
        1 atgatgaaaa aagaggggaa cagcaaaaga tactccataa aggatctaat gataaagtca
       61 atgtattcat aacacttctc tatcctatga attgaatcaa atttacaaca agcaaaacaa
      121 gaaacagtaa tgatttcata agccatctaa acagcatcaa gagatatgta ctcaagagaa
      181 gtatcaagag atttattctt gtaatagaca atgcatcatt tcatgtcagc aaaaagacta
      241 aacagtttat agaaaaacaa tcatactggc taactgtact atttctacca acacatgcac
      301 cattcctgaa tccagtagaa acaaaagtaa acaggaatct gaaaaaagat gtatgtgcca
      361 attacaatta tggaacagaa gataatctat tatgtaatgt aagaagatat cttagatgtt
      421 ttggttgttg gcctaaaata tgatacttaa cttattagta taagttacaa atattgttta
      481 cacatcataa ttgaaaattc atactttacc gtctaaatgt tagatccaat tgttatattc
      541 acatatagtt aggctcttag tggaagatac tcaattttta tataatcaag gaatacaaca
      601 cattgattct ttaggttgtt tggttaccaa cgattcatgt tcgtacaagt gaagttattg
      661 gagatatact agaatcggca ttttagataa tattctataa aataagaatt ttttgtctta
      721 taaaaactct taaaaataac aacgatacta tcttcgatca atgtcaaaga aagaagtcta
      781 tattcaaaat atagatagac ctatgaatat atacaactac gcttctttta aatacgaatc
      841 aagtccttct ctccctgatg caattgagat tgactatgat atgttagtct cttctataca
      901 agaatcaact gatagtggtg agataataag tcctttacga agtatcaaat caggatgtta
      961 tcttctaagg tatacccctt tgtcaatagg tagaggattg cttactgcac attatgatgg
     1021 gacattgagg attcaattag atggtaccaa tatcattgct agcggcgatc tctatctaca
     1081 tcaaataagt tctagttttg catcgccagt gaatgctgaa ccgaatccat cacaaggtat
     1141 ccctatattc agtaggtcaa attacagata ttatatacaa gttgtaagat tacaacgaag
     1201 cctgaccaat acaataatta tctttaagca gtaccgttat gaacatctta ataagtggat
     1261 aaatgaagga acatttaagg tgattatggc ccggattcca gctcccatag gatttccatc
     1321 ttcttcagac tattttactg gtccaattac caatagtact ggaactatag tagggaatct
     1381 aactatggga tggatctcca aatattttag acgtgcaaca atagaaattg atagatcatc
     1441 tgcttctgaa gccccacttg ataatggttc tggaatagat tggcgtagtg tattcaactt
     1501 ggtcggatgg gatgttacca taattcaaag tagctcatca gtttcagaac caagtgggga
     1561 atcttggtca gatgccgagc tacatagtaa aatgttgtca atgcgagatt cctcggattt
     1621 ggatactaat tggcgttatc atatattatg tgtacgaaaa ctcgactcga cttcaagagg
     1681 gattatgtac gataatagtg gaacagattc gaataacatc ccacgtgaag gtgttggaat
     1741 atcatctcat tgggtaattc caaatattaa tcaatgggga ttagtcaagg gtttaagatt
     1801 cggaattgca tttgctccat attttagaac agcgttacat gaaataggtc atgctatggg
     1861 attataccac aatactatag ataatggaat tatgaatact accgatacta ttgcaaataa
     1921 tgcagttgca ccaattcaat ttcctaataa tattcaatgg tctcatgcac cggatgatca
     1981 gaatagacta agacatttgc ctgatttatg ggtccgacca ggtggaattc catttgggag
     2041 tacatatcct tcagtaatcc cagatgattt gattttggaa gatcaaagtt tggaaatgaa
     2101 ggtttttcct gaattagaaa cagtaccctt cggagctcca gtgcgtgtta atttcagtct
     2161 attaaacaat tccgatgaac ctagaataat tcctaatgaa ttgagcttaa aaaaaggaaa
     2221 tattagtgga aaagttatcg atccatcagg aactgagaga acttatttgt cgattatatt
     2281 atgtttagat gaggaagaaa catcagctat agggaaggga gagtctagag atggttctat
     2341 tactctattg cgaggagtac agggagcact attcccacta gcaggggttt ataaaatagt
     2401 agtagaagca tcttgggaaa taaatggcct caaacaaaga tctataggcg cgacaaatgt
     2461 tatggtgact cccccggttg acgatgagca tgctaaagcg gcatataaga taatgtcaaa
     2521 tcctgattca ttacttgtac ttgtaatagg aggagatcat ttaaaagaag gaattgatgc
     2581 tatacaatct ggtctagaaa atcctattct aaggcctcat tatgaggtaa ttgaagcaaa
     2641 acgcttaagt aaaaaatttg gtaaacgtca accagacata aaattagcct cgaaaataat
     2701 taccaagaag acaataatga gttctactga agctgagagt ctatcaaaaa ctattaaaga
     2761 tgtaaaaaat gatgcatcta gtgatataat aaaaaaaatt aatgaagtct tgaaatctag
     2821 agttgaaaac ggatctacga ctaagagaga aagaaagaaa aaataaaatc atataatttt
     2881 cttttataat cttacatctt tctttttcag tacttgcctg aatattttct gtcctaaatc
     2941 taatgctgta taaatacttg taacagtatt ggtagtggat ttcgtcttca agtttagctc
     3001 agttgaatat ttcatctaca aggcgacatt cttatagttt tgtttaataa taataatgtc
     3061 attaaataac attgttttaa tgtcagggtc atctaatgaa cataatatta taattggaaa
     3121 atggacaaaa ataactaatt cagaatgcag taatttatat ccagacaacc tagagtttaa
     3181 agagagagga atttatagag gattcaaagg tttagataaa aaagaattta caatttggga
     3241 cgctggttca tatgaaataa tagataataa ccagatgaaa atatcgactg caaatgatgc
     3301 agagattctt tataattttt ctatacatga taatacttta gaattcttgg atgagaacag
     3361 atgtaaattt cgatatcaaa aagaaagtaa caagtcttct taggaaaagt caatgaaatt
     3421 aatacatata aaacatctaa taaattaaag agcgtaagtt agatttttag aaataaaatg
     3481 tttaatatta gaagatatat attattctac ccaatatttt gtgaataata aaatttattc
     3541 ccccaaaatt gtgttagtaa agtttcttga tcagctattt atttatcaat atgaccttaa
     3601 taattagtcc ttaactcagt taaagaaagt actggtttga taagatatag aaggaattaa
     3661 tttactaaat aagaggaaca aaaaaattaa aatctatggt gaaagcttaa ttatttggat
     3721 ttgatgtcgt aacacatcca cttttttcta tagatttaac acgtacatca ttctttagct
     3781 cattagagat tttataaaag atcttgttat ctacaggttc tataattatt attcctgtat
     3841 tctctaaaac attaacgatt ttgataccac ttgaatttaa tttataaacc aattcatcaa
     3901 gagtatgttt caaatttaca gatccaataa attcattcaa tgttattatg taggtgtttt
     3961 ctttttctat acaatcaaga ttactatcgg tagtattgtc atcgaaggat aatgatgata
     4021 aagcatatga aattccgata gaaaatgaat aaaatagtga tagcataatt gttaatgagg
     4081 atgtagaaag aattaggaat attaaattta acattataga tttagatatg tagttcattg
     4141 tattaaattt ttcataaatc aagcttatag ctttttcaga agtggttaat tatttacttc
     4201 atttagagct tatccaaaaa ttatacctct taaaaacaat tatgctattt gctaattgta
     4261 caagaccaag aagattttat atctgctatt catataccaa ttaagataag tattcttact
     4321 catttctaac taaagatttt ctaaattcat atttttgata acattgttaa ttttgtaatg
     4381 aaatgagcac atttatgcgt gttatactat ctaaatttac gattatctaa aatagacctt
     4441 ttgcgtaata gacaaactta cagctatatt cctcttgtca agcataattc cttatagatt
     4501 tgttagatta cgctcgttta tctagaaaac ctgtactatt cagatcattt actggactgg
     4561 atttatcaga gtttgattca ttgtatgaag aaatagaatc caaatacaag gaatatgaga
     4621 taaaacgcct ctctaaaaga aagcgaacaa gaccggtagg tacaggaggt aggcatttca
     4681 aatatccagt acgagataga ttacttatgc ttcttgtgta ctac
//
LOCUS       DATIAS010000227         5570 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1538734, whole genome shotgun sequence.
ACCESSION   DATIAS010000227 DATIAS010000000
VERSION     DATIAS010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538734"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VLA74_04435"
     CDS             <1..366
                     /locus_tag="VLA74_04435"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF49989.1"
                     /translation="EAIQCYDTAISIKNDYADAYYNKAVSLSELGRFEEAVRSYDQVL
                     YLSYDYVYAYYGKGYSLDCLERYEEAIQCYDEAIRIEPEYLHAYYRKAEGLGKLGKAT
                     EADKIIKRAKEIEAKESNR"
     gene            complement(476..1069)
                     /locus_tag="VLA74_04440"
     CDS             complement(476..1069)
                     /locus_tag="VLA74_04440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49990.1"
                     /translation="MNELLNLKKSSFSRIMFTVTLTIGINSILINYPGFFNDVFGQMH
                     GGGGDGHNLPPSIIGDREIFLKFNNPTFTVSEKGKVSLALIDNKTGNNIPHVTYIISI
                     HDDKNKNLMTENLHGHNGDINIEFINSNMERYHVSANYDTLAASYVSDFGSPIKIEGP
                     IFSSKGEYRLVAEITGIDFDNTFLPQPLIYEYKIEVK"
     gene            1228..2310
                     /locus_tag="VLA74_04445"
     CDS             1228..2310
                     /locus_tag="VLA74_04445"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF49991.1"
                     /translation="MVIDTIRTIKLLGKWSTNRFIGKKRPLIAVFSLTHYCNFYCPMC
                     PFGDPDKMSQIKIAKRDDLSTEQWKIIFDKVSKYCIWSIIEGGEPTSRPDFMKLVVYL
                     YKLRMPITLITNCSLLHQIDLLELKKYIQFITCSIDSVYQDSYCKVRGVSQEVFARVM
                     KNLLLLKNHNIPHYFNSVITKYNTDEFINQSYFEKAKELGSNAVSLTFVEDRSDVDYS
                     LLPDRKTIVSICESIIDYSKKHTSPRIMIPMEYFEQIIEHGRGIYDECGVWKSIFVNG
                     NGTVLVPCWKYNSPSNTYNLLEQSVEEVWESPQWDIARTCKDCKVLGCIWYSSQPITT
                     FAKNYMRGMSNLINQEKYGTLNSEIY"
     gene            complement(3142..3552)
                     /locus_tag="VLA74_04450"
     CDS             complement(3142..3552)
                     /locus_tag="VLA74_04450"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSF49992.1"
                     /translation="MENEEIKLSNKEIKFLQNNEICRVATSYNDIPHVVPVCYIFWNN
                     CIFFATDYQTKKYKNIRKNNRISIIIDVYDKTNGNKALFIQGLGSIIEKGEEFKNIYG
                     IFEKKFSWVKKDPWKENEAPFVKVHIKKKIEWGL"
     gene            4070..4351
                     /locus_tag="VLA74_04455"
     CDS             4070..4351
                     /locus_tag="VLA74_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018039292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSF49993.1"
                     /translation="MDPSKIKCSHILLKKHSEALEILNRIKNGESFSNLAKDLSIDKA
                     SGKRGGDLGFFRKGAMVKPFEDAAFKLQKGEVSEPVKTEFGYHIIKRIS"
     gene            4485..5309
                     /locus_tag="VLA74_04460"
     CDS             4485..5309
                     /locus_tag="VLA74_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF49994.1"
                     /translation="MKGLYAVFFILSLVSIIIFPLSLQFVFAQKKNEANTFPVIANIG
                     LETIEKKGFIRVVAFISGQAFTEDIQLSEIKSSTKKIAVTFNVEKETNLVTAAPPDEL
                     FICAYHVKDILKEYNSFIYYDCNEGDLLSTDSPTKLGLFKNFNVYDKSKVLYDLSQKS
                     IPDPKHKNSDKVIIKVIVPLSDRKDTEKLMVMAMVKGQIQTEIIDVQQELDKSKDYTL
                     TKIFTFDRETDIGTINIGDKFFACVSSEDLDPPEGTECEKREVKRFGKASNPLPAR"
BASE COUNT         1951 a          800 c          826 g         1993 t
ORIGIN      
        1 gaagcaatac aatgctatga tacggcaatt agtataaaga atgactatgc agatgcatat
       61 tataacaaag cggtatcttt atccgaactt ggcaggtttg aagaagcggt aagatcctat
      121 gatcaggtct tgtatctatc atatgattat gtatatgcct attatggaaa aggatattcg
      181 ttggattgct tggaacgata tgaagaagct attcaatgtt atgacgaagc aattagaatc
      241 gaacccgaat atctacatgc ttattatcgt aaggcagagg gccttggaaa attaggaaaa
      301 gcaactgaag ccgataaaat aattaaaagg gctaaagaga tagaggcaaa ggaatctaat
      361 cgataacctt tcaatctcaa ttacgacatc ttaatttctt ttctcattaa attaaaatct
      421 ttgaaattat actgcatact gtttacatta tcaactaata tcagagttct tacagctatt
      481 ttacttcaat tttatactca tatatcagtg gttgtggtaa aaaggtattg tcaaaatcta
      541 ttccagtaat ttcagccact aatctgtatt ctcctttgct actaaaaatg ggaccttcta
      601 tctttatagg actaccaaag tcagaaacat aacttgctgc tagggtatca taatttgcgc
      661 taacatggta tctttccata ttgctattga tgaattcaat attgatatca ccattatgtc
      721 cgtgaagatt ttcagtcatc agatttttat ttttgtcatc gtggatgctt atgatgtatg
      781 taacgtgtgg aatattgttt cctgttttat tgtctatcaa tgctaaacta acttttcctt
      841 tctccgatac tgtgaatgtg ggattattga attttaaaaa aatttctcta tctcctataa
      901 ttgaaggagg taaattatga ccatcacctc caccaccatg catttgtcca aaaacatcat
      961 taaagaatcc tggataattg attaatattg aatttatccc tattgtaaga gtaaccgtaa
     1021 acatgatcct actgaaactc gattttttta aatttaagag ctcattcatt atctaaaaaa
     1081 tgcatattgt tgtgaatatt tatactttaa actaaaataa taaaaaatag agctgaatct
     1141 atgatctctg ttatctttgg ttagtcattt ttttgcttaa atacaaagta tgaaaaaaat
     1201 ttatacattt gaattcatat aataacattg gtcattgata ccataagaac aataaagctt
     1261 ttaggaaaat ggtccacaaa tagatttatt ggaaaaaaac gtcctctaat agccgtcttt
     1321 agtcttacgc attattgtaa tttttattgt ccaatgtgtc cttttgggga tcctgataaa
     1381 atgagtcaaa ttaagatcgc caaacgagac gatctgtcta ctgaacaatg gaaaataatt
     1441 ttcgataaag tttcaaaata ttgtatctgg tcaattattg aaggaggtga acctacaagt
     1501 agacctgatt ttatgaaatt agttgtatat ttgtataaat tgcgtatgcc catcaccttg
     1561 ataactaatt gttctttatt gcatcagatt gatttgcttg aattaaaaaa atatattcaa
     1621 tttataactt gcagtatcga ttctgtatat caagattctt attgtaaagt aagaggtgtg
     1681 tcgcaagagg tttttgctag agttatgaaa aatcttctcc ttcttaaaaa tcataatata
     1741 cctcattatt tcaattcagt aattactaaa tacaatactg acgaatttat caaccaatct
     1801 tattttgaga aagcgaaaga acttggttcg aatgcagttt cactcacatt tgtagaggat
     1861 aggtctgatg tagattattc tctcctacca gaccgtaaaa ccattgtctc catttgtgaa
     1921 agtattattg actatagtaa gaaacatacc agtccaagaa taatgatacc gatggaatat
     1981 tttgaacaaa taattgaaca cggtagggga atatatgatg aatgcggtgt ttggaaaagt
     2041 atctttgtga atggaaatgg aacagtacta gttccatgtt ggaaatataa ctctccttca
     2101 aatacatata atttgttaga gcaaagtgta gaagaagtgt gggaatctcc tcaatgggat
     2161 attgcaagaa catgtaagga ttgcaaggta ttaggttgta tttggtattc atcacaacca
     2221 atcaccacct ttgcgaaaaa ctatatgaga ggaatgtcaa atcttatcaa tcaagagaaa
     2281 tatggaactt taaattcaga aatatattga attattactg tagtattaga cagtaattga
     2341 tagcatcttt taacagatca ttttataata tgatataaca atatttggaa gtatttacta
     2401 tctttatatt aagtactaat ttatctactt atgtgtctgg tgacgtaaat tccgtattat
     2461 agttccataa ttctattctt aaattatatt aaatagatta tattaaatag aatttgacaa
     2521 gttaattaaa tttacttact ctaaaatggg ataagccatt ttataaaatg gcttatccca
     2581 atgtgatgac tcggttggta tgtgaatcac agactgggtg agattgagaa tatgttctcg
     2641 aatatcttat agaagtaata ttatttaata atttttgtca ttcgattgga ggtggtgcga
     2701 atccattctt cctcaaattt tttcggcgcc gaaaaatttt atttatcatt caatatttca
     2761 ttttgacatg atcaaaaagg aataaaaaag acttattttg aatgtttgac tttgttatga
     2821 tgtaagaaga cctttttcca cagcttcatc atcatcatta tacaagtctt ctggattctt
     2881 atttttcatt atttaatatt aactatcttt ttgagtattt taaatttatt tctataaaaa
     2941 atttacaaat aaacctatca atttaaacta tatatctcta tatttagcca ctaaaaatat
     3001 atgcctttca cgtgagaaac atttgccaaa ataggtcatg acatctaaga aatatgattt
     3061 gtagataatc accgtgataa ttttatctgc ttaaaaaatt ccgtatacaa cttgaacatt
     3121 ctctttttat atcttgtccc tttacaaacc ccattcaatc ttttttttaa tatgaacttt
     3181 tacaaaaggt gcttcatttt ccttccaagg atcttttttc acccaagaga attttttttc
     3241 aaaaatacca taaatatttt tgaattcctc tcctttctca ataattgaac caagtccctg
     3301 tatgaataga gccttatttc cattggtctt atcatataca tcaataatta ttgatattcg
     3361 attattttta cgaatatttt tatatttttt agtttgataa tctgttgcaa agaatatgca
     3421 attattccaa aaaatataac ataccggaac aacatgggga atatcgttgt atgatgtagc
     3481 aaccctgcaa atttcgttat tttgcaaaaa ttttatttct ttattagata gtttgatttc
     3541 ttcgttttcc acttattgta tattgtaaat agttccttat attctaatac agttattacc
     3601 tttatttgtt ttgtatataa agtatcagat ataaataaca taacattgtc caaatacaat
     3661 ctatgataat atctaagaat tataatatgc atatgtcatt gtacttttca ttatattgta
     3721 ataatatatc atttaataat ttcaaattct gaaaatagtg tattataaaa agttacttgt
     3781 ctaactttgt gtggatttat ttatatattt tagtaatata gctataaatg tagaatgtaa
     3841 aaataagata ttattcaaat ttttagtctc tgttatattg caaaatggga atatattatc
     3901 ttaaaagtat tcaacatcat tttatttttt ttatagttat ttgttaatat ctatgaaaat
     3961 ctaagtcata gaagtaagct tgataggaaa cagcgtctag accttcaaat aaagtgagtt
     4021 aatcatcaat gaaaactttt ttaactgata gtttctcttg tttttttcaa tggatcctag
     4081 taaaatcaaa tgttctcata tccttttaaa aaaacatagt gaggctttgg aaatattgaa
     4141 cagaataaaa aatggagaaa gtttttctaa tctagctaaa gatctttcta tcgacaaggc
     4201 gagtgggaaa cgtggcggtg acttgggatt ttttagaaag ggagccatgg taaaaccatt
     4261 tgaggatgct gcatttaaat tacagaaggg agaggtatcc gaacctgtaa aaacggaatt
     4321 tggataccac atcataaaaa ggataagcta gcctaaaaaa ctaaagttct tagtttacta
     4381 tttaacgacc tgttgtcttt tttgatatgc atttatgtta taatataatc aataaattat
     4441 acaaacatat ttaatgaaga tttgatctaa taataaaatt tcatatgaag ggactttatg
     4501 ctgtattttt tattctttca ctcgtttcga tcattatttt tcctttatcg cttcaatttg
     4561 tattcgcgca gaaaaaaaat gaggctaata catttccagt aatagctaat attggattgg
     4621 aaactatcga gaaaaagggt ttcattcgtg tggtagcatt tatcagtgga caagctttta
     4681 cggaagatat ccaactatca gaaattaaaa gttcaacaaa aaaaattgca gtaacgttca
     4741 atgttgaaaa ggagaccaat cttgtaactg ccgctccgcc tgatgagctt tttatctgtg
     4801 catatcatgt taaggatatc ttaaaagagt acaattcctt catttattat gattgtaacg
     4861 aaggcgatct attatccaca gacagtccaa caaaattggg attatttaag aattttaatg
     4921 tatatgataa aagcaaggtc ctttatgacc tatctcaaaa atctattcct gatccaaaac
     4981 ataagaactc cgataaagtc attatcaaag taattgttcc tctatcagat agaaaagata
     5041 ctgaaaaatt gatggtaatg gccatggtca aaggacagat tcaaacagaa atcatagacg
     5101 ttcaacagga actagacaaa tcaaaagact atacccttac caagatattt acgttcgata
     5161 gagaaacgga cataggaaca ataaatatag gagacaaatt ttttgcatgt gtctcgagtg
     5221 aagatctaga cccacccgaa ggtacggaat gtgaaaaaag ggaagttaaa agatttggta
     5281 aagcatcaaa tccgctacct gcacgctaaa taataaaaat tccactaaat ttgtaaaatt
     5341 ttgaaaatat tggagattta ttacttcttt tcgattatat gtatattgtt cattccttta
     5401 ttaaatttca tttattaaca agcgatatac tcttaaatcc atcaattttc agatatacag
     5461 tttaatcatt atcattttag aaaaccttta caatattata ttatagtgaa atcgagtata
     5521 atcttaatat ttatgtcaat acgagtttat cctatgacat cacataatca
//
LOCUS       DATIAS010000228         2766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_994865, whole genome shotgun sequence.
ACCESSION   DATIAS010000228 DATIAS010000000
VERSION     DATIAS010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_994865"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1412
                     /locus_tag="VLA74_04465"
     CDS             <1..1412
                     /locus_tag="VLA74_04465"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF49995.1"
                     /translation="SNSIDYRIKFYKELGEKLFRPKLSNSCEASIVTLGGFGEIGRSC
                     FLLITKESKVLLDCGINIYEEKSLNYFPRFDITGFCLDEIDAVIITHAHIDHTGFLPF
                     LFKYGYRGPVYCTEPTLPLMTLLFLDYHKNHGIYSEEDIENVIIHTMPLCMGIVTDIS
                     PDIKLVFSNSGHILGSTSIHLHIGNGEHNLVYTGDLKFGKTNLLDNASWNFPRVETLI
                     IEGTFGSKDLPHKREETDPILIESINQTLRENGKVLIPVPIIGLSQELIYTLTKYQEL
                     GMLEPSEIFVDKSILEATHIYEIYHEYLSKEIKTKILNENASIFNYKNLKPLTSKSKV
                     DKPGIILVASSMLIGGLSRKFLKQIHNDPLSKIIFLSYQAAGTLGKEIQSGNTEVTLN
                     GQQQLKLKCKIDSIHGFSNHSDYNQLLAYMSRLKPKLKRVIVNHGEKSRIQNLASSVN
                     KILNIQCQYLLVPEATKLL"
     gene            1530..2249
                     /locus_tag="VLA74_04470"
     CDS             1530..2249
                     /locus_tag="VLA74_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HSF49996.1"
                     /translation="MPNQQQELIKSSIDNLSKKWNIEKPIYDLHLGRRKDVVDTTIKV
                     NQVIFHIPKLSNDNLFVLWKCLWPDCHNCCEKQGRLPLTKDDLYNLKTKMNYESINKF
                     LNQETRISSWNEPGTYGNLITHITMISLKRKTDEGNEEDGKPVKCRFLDDQGSCKIQD
                     GKPGVCWLYPFASWMESYDNRPLVHATFQFTGDCPGYYLSKTIDDMLPVLQDYSLKIY
                     DYNMSVNRTIREGFGATNIVY"
     gene            2361..>2766
                     /locus_tag="VLA74_04475"
     CDS             2361..>2766
                     /locus_tag="VLA74_04475"
                     /inference="COORDINATES: protein motif:HMM:NF018392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoantigen p27 domain-containing protein"
                     /protein_id="HSF49997.1"
                     /translation="MSNGKSTSSSTSSTSSSSSSSEGDNIKSAADLLLKGGTLLSNSC
                     ENCGGVQVRFKENIICANCGRQIKELNVTQIEEEKKKKKIKNNNNNNPGLSQEIKVQS
                     TVDNNSNVKLTSYKRVIYKKITLLIASLENDGD"
BASE COUNT         1081 a          357 c          422 g          906 t
ORIGIN      
        1 taagtaattc tattgattat aggataaaat tctataaaga attaggtgaa aaacttttca
       61 gaccaaaatt aagtaatagt tgtgaagcaa gtattgtgac attgggagga tttggtgaaa
      121 ttggcagatc atgtttttta cttattacta aagaaagtaa agtattactt gattgtggaa
      181 taaatattta cgaagaaaaa tctctaaatt attttccacg atttgatatt actggttttt
      241 gtttagatga gatagatgca gttataataa ctcatgctca tatagatcac acaggttttc
      301 ttccattttt attcaaatat gggtatagag gtcccgtcta ttgtaccgaa ccgacattac
      361 cattgatgac acttcttttt cttgattatc ataaaaatca tgggatttat tctgaagaag
      421 atatagaaaa tgtaataatc catactatgc cactatgtat gggaatagtt acagatatat
      481 caccagatat aaaacttgta ttctctaatt caggacacat acttggatct acatctattc
      541 atcttcatat tgggaatgga gaacataatt tagtttatac aggggatcta aaatttggaa
      601 agactaattt actagacaat gcttcttgga attttcctag agtagaaact cttattatag
      661 aaggtacatt tggaagtaaa gatttacctc ataaacgtga agaaactgat cctatcctga
      721 tagaaagcat taatcaaact cttcgagaga atggcaaagt tctcattcca gttccaataa
      781 taggcctttc gcaagagctt atctacactt taacaaaata tcaagaactt ggtatgttgg
      841 aaccatcaga aatttttgta gataaatcta tacttgaagc aacacatatt tatgaaatat
      901 atcatgaata tttgtcaaaa gaaattaaaa caaaaatttt aaatgaaaat gcatcaatat
      961 ttaattataa aaatctcaaa ccgctcactt caaaatcaaa agtagataaa cccggaatta
     1021 tactggtagc atcatccatg ttgataggtg gtctttctag aaaattttta aagcaaattc
     1081 ataatgatcc tctaagtaaa ataatatttt tatcttatca agcagcaggt acactcggta
     1141 aggaaattca gtcaggaaat accgaagtaa cactaaatgg acagcaacag ttaaaattaa
     1201 aatgcaaaat tgattctatt catggattta gcaatcatag tgactataat caacttcttg
     1261 cttatatgag tagattgaaa ccaaaactga aaagagttat agtaaaccat ggagaaaaat
     1321 ctagaattca aaatttagct tcatcagtaa ataaaattct aaatattcaa tgtcaatatt
     1381 tacttgtgcc ggaagcaaca aaacttttat aattttattt ttttaaagtt ttatttctct
     1441 ataaatataa aaaaggggag aatagcaagg tcaataacaa gagtaaaatg attaaactta
     1501 aaggtgttta tttcttatag taatattata tgccaaatca gcagcaggaa ttaattaaat
     1561 cgtctattga caatctttca aaaaaatgga atattgaaaa acctatttat gatcttcatt
     1621 taggcagaag aaaagatgta gtagatacta caattaaagt aaaccaagta atttttcata
     1681 taccaaaatt atccaatgat aatttatttg tactatggaa atgtctttgg cctgattgcc
     1741 ataactgttg cgaaaaacaa ggaagattac ctttaacaaa agatgacctt tataatctta
     1801 aaactaaaat gaattatgaa tctattaata aatttttgaa tcaagaaaca agaatatctt
     1861 cttggaatga gccaggcact tatggaaatt tgattactca tattacaatg atctccttaa
     1921 aaagaaagac agatgaaggc aacgaagaag atggaaaacc agtaaaatgt aggtttttgg
     1981 atgatcaagg tagttgcaaa attcaagatg gcaaaccagg tgtatgttgg ttatatcctt
     2041 ttgcatcatg gatggaatca tatgataata gacctctagt tcatgcaaca tttcaattta
     2101 caggcgattg tcccggttat tatcttagta agactataga tgatatgcta cctgtattac
     2161 aagattattc attaaaaatt tatgattata atatgagtgt taatagaaca ataagagaag
     2221 gctttggagc tactaatata gtatattaat tacttatttg ccaaattatg tgtctataaa
     2281 tttaattaaa aaaaattaaa aataattaat ataaaaaaag aaaaataaat aaatctatat
     2341 ctatctttat taatacagat atgtcaaatg gtaaatctac ttcttcttct acttcttcta
     2401 cttcttcttc ttcttcttct tctgagggtg ataatattaa aagtgcggct gacctattat
     2461 tgaaaggagg gaccttactt agcaattcat gtgaaaattg tggaggagtt caggttcgct
     2521 ttaaagaaaa tattatatgt gctaattgtg gaaggcaaat aaaagaacta aatgttacac
     2581 aaatagaaga ggaaaaaaag aagaaaaaga ttaagaataa taataataat aatcctggtt
     2641 tatcacaaga aataaaagtt caatctactg ttgataataa tagtaatgtc aaacttacat
     2701 catataaaag agtaatttat aaaaaaatta ctttattaat tgccagttta gagaatgatg
     2761 gtgatg
//
LOCUS       DATIAS010000229         2653 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_995027, whole genome shotgun sequence.
ACCESSION   DATIAS010000229 DATIAS010000000
VERSION     DATIAS010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995027"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(334..1014)
                     /locus_tag="VLA74_04480"
     CDS             complement(334..1014)
                     /locus_tag="VLA74_04480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF49998.1"
                     /translation="MIKSNDFGFHHIFIKSSSTNTSNNKKEYDEINSNLTLVLLHGTG
                     GNEEDLIFLGKELEPNASILSPRGKVLENGMPRYFRRLAEGVFDIEDLKFRTHELADF
                     IKKCSLHYKFDLKHTIAVGFSNGANIATSILLLHPDVFQGAILFRAMVPLIPNPLPDL
                     SNKKILLAAGVNDPIVSRVETENLVRLFQKANANIVLKWQQSSHNLIQEDILVARKWI
                     SNNFSISI"
     gene            complement(1041..2033)
                     /locus_tag="VLA74_04485"
     CDS             complement(1041..2033)
                     /locus_tag="VLA74_04485"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF49999.1"
                     /translation="MTNKNQIFGLHHITAICSNPQKNIDFYTKLLGLRLVKLTVNFDD
                     PTTYHLYYGDEIGHPGTILTFFPWPDAPKGYRGTGQAITTSFLIPLNSIDFWKDRLKN
                     NDIGFEGPTKRFDNEEQVIKLYDPDGLELELVAHSSAKENDERFWKDGPISYENGIRG
                     FYSVSLSEEGYERTSEILKDMGYKMIENEGNRFRFQIEDSQSNTGAKILDVLCLPYTP
                     YGRIGIGTVHHIAFRTSSDESQISIRKNIIKIGLNPTPVIDRTYFHSVYFREPGGVLF
                     EIATDPPGFTVDQKVQDLGKMLMLPQWLEPMRGRLERVLTKIELPHYDNKDKSK"
     gene            complement(2073..2333)
                     /locus_tag="VLA74_04490"
     CDS             complement(2073..2333)
                     /locus_tag="VLA74_04490"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF50000.1"
                     /translation="MIVNNTSSMKEWSRIRKRDGAIHWGLYYDGENPSEYIETFISES
                     WEEHLRQHERFTVDDREIEDKVRSFHIGKNPPVVTHFIAESL"
BASE COUNT          864 a          434 c          366 g          989 t
ORIGIN      
        1 gaaaataaag atactattag attggaatat cttccagttg gttctccaga atttaacgca
       61 gttgaagaat gttggagaca aggaaaatat aatatatact ttcttgttat tataatacat
      121 ttgattctct aaaagaagca aattctagtt actatagaac cagaaagttt aatctaaata
      181 ttgttcaata tcttaccaga acaatagatt aacgaaatta tgttagtcag tatagtagac
      241 aaagtcaaac caatgtttga gcaaatgcca gaaaggtcag attataaaat agcactattt
      301 gaattagatt aacttacttc ttccatatct aatttaaata gaaatagaaa aattatttga
      361 tatccatttt cttgcaacaa gtatatcttc ctgaattaaa ttgtgacttg attgctgcca
      421 ctttaataca atatttgcat tagctttttg aaataatcta acaagatttt ctgtttcaac
      481 tctagagact ataggatcat ttactcctgc ggctaatagt atttttttgt ttgaaaggtc
      541 tggtaaagga ttaggaatta agggaaccat tgctctgaaa agaattgcac cttgaaatac
      601 gtctggatgc agaagtagta tactggtagc aatattagct ccatttgaaa atcctactgc
      661 tattgtatgt tttaaatcaa acttataatg taaagaacat tttttaatga aatcagcaag
      721 ctcatgagtt ctaaatttaa gatcttctat atcaaatact ccttcagcca atcttctaaa
      781 atatctaggc ataccatttt ccagtacttt tcctcgagga cttaatattg aagcattagg
      841 ttcaagttcc tttccaagga aaataagatc ttcttcattt ccaccagtac catgcaatag
      901 tacaagtgtt aaattactat ttatttcatc atattctttt ttgttattgg aagtattagt
      961 agaagaagat ttaataaata tatgatgaaa tccaaaatca ttcgatttaa tcattttctt
     1021 gttgctcctg tttattctct ttattttgat ttatctttat tatcatagtg aggtaattct
     1081 atctttgtta ataccctttc taatcttcct ctcatgggtt caagccattg tggtaacatc
     1141 agcatttttc ctagatcttg tactttttga tctactgtaa atcctggtgg atctgtagca
     1201 atttcaaata aaactcctcc aggttctcta aaatatactg aatgaaaata ggttctatca
     1261 attactggcg tcggatttag tcctattttt ataatatttt ttctaattga tatttgagat
     1321 tcatccgatg atgttctaaa agctatatga tgaactgttc ctattccaat tcttccataa
     1381 ggagtataag gcaaacaaag aacatctaat atttttgcgc cagtattaga ttgtgaatct
     1441 tctatttgaa aacgaaaacg gttaccttca ttttctatca ttttgtaccc catatctttt
     1501 aatatttcag aggtgcgttc atatccttct tctgataaac ttacagaata aaatcctctt
     1561 ataccgtttt catatgatat tggaccatct ttccaaaatc tttcatcatt ttcctttgct
     1621 gatgaatgag cgactaattc tagttcgaga ccatcaggat catagagttt tattacttgc
     1681 tcttcattgt caaaacgttt tgtaggtcct tcaaaaccaa tatcattatt ttttagacga
     1741 tctttccaaa aatcaataga gtttaaaggt attaaaaaag atgttgttat agcttgacct
     1801 gttcctctat aaccttttgg ggcatcaggc caaggaaaga aagtaagaat agttccagga
     1861 tgtcctattt catctccata atatagatgg tatgttgttg gatcatcaaa attaacagtt
     1921 aatttgacca atcttagtcc taataatttt gtataaaaat caatattttt ttgtggatta
     1981 ctacaaattg cagtaatatg atgcaatcca aatatttgat ttttattagt catgcttctt
     2041 tttattatct cctccttttt ttctttttct cattataagg actcagctat aaagtgggta
     2101 accacaggtg gattcttacc aatatggaaa gatctaactt tatcttctat ttctctatca
     2161 tctacagtaa atctttcatg ctgtcgaaga tgttcttccc aagattctga tataaaagtt
     2221 tcaatgtact cactaggatt ttctccatca taatacaaac cccaatgaat ggctccatct
     2281 ctttttctaa ttctactcca ttctttcata gatgatgtgt tgttaacaat caccaaaaaa
     2341 ttttctttaa tccttaaact atgttattct atatgacata atataattga ataaataact
     2401 ggtcccactt tatcgaaggg ttcaaatcca acagaatcct ttcaatcttt tacaaatatt
     2461 gcgaataata ttattaaatt tgaaaattct tggttcagat aattaattga tagttaaaca
     2521 atcctaaaaa aggaaagatt aattcctagc tcctattatt attacttcat gaattctata
     2581 aaaggtagga ttggaaccca gagttcaatg gggccagtgg gatgtgaaac aaatttgacc
     2641 taatttttgg tcc
//
LOCUS       DATIAS010000230         3016 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1675719, whole genome shotgun sequence.
ACCESSION   DATIAS010000230 DATIAS010000000
VERSION     DATIAS010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3016
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675719"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1100)
                     /locus_tag="VLA74_04495"
     CDS             complement(<1..1100)
                     /locus_tag="VLA74_04495"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSF50001.1"
                     /translation="MNKILLSILIVVNLVCSISIINSFNILFSLSYSQQDINVQKNTT
                     PVLATTNATSTAVETTPVLATTNATSTGAYCYKFQWGSSGTEDGQFLRPHDVVFDSKG
                     DVYVNDRERNDVQKFTPDGKFISKFGEKGEELGQFQSPYSMVIDLNDYLYIIDRGNDR
                     VQKMYTNGTPIKSWNSIQGDSVTKNQDNEDENGDANDDQETDQFASPEDMTIDKNGNF
                     YLTDTGNNRILLFDKNFNFISKFGKDGTGPGEFNHPHGIAVDSEGNIYVNELESARIQ
                     KFTNNGTFIKQWGSAGTGNGQFTLPLEHLEIDSSDHVFMVDGADNPRIQVFDNNGIFI
                     TSFGKLGIGNGEFKKPEHVNFDSKGDVYIVDRG"
     gene            complement(1726..2634)
                     /locus_tag="VLA74_04500"
     CDS             complement(1726..2634)
                     /locus_tag="VLA74_04500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50002.1"
                     /translation="MNSVNNKLFICFVILAIISSALFFYNISNLIYAQSDDENDEDVK
                     DNNKQKGTMELKIKLNLNNIDQNAKTIKVISYVNGEAKEVYIDLAKEKSHATNNILIK
                     NLQYDNSNDISSIGIKDQYFVCGYVFNNGIQKTENIQNTEIPIFDCDEGNIGSTDKNS
                     AKLFYALNKFNESVNLNKLSNQGNNAAKEVKLNAKIPLYDKTDEVDQINVVAMVRGEY
                     EVKTINAKEELEKLDDKSGNDILDIPFIFNRNTELGQVQIGDMFFICVTGEELAPPEH
                     SHCEKRLVKSFDNGNQVFARKDSFFK"
BASE COUNT          956 a          504 c          390 g         1166 t
ORIGIN      
        1 cctctgtcga caatatatac atctccttta gaatcaaagt ttacatgctc tggtttttta
       61 aattccccat tccctattcc taactttcca aagcttgtga taaatattcc attattatca
      121 aatacttgta tacgaggatt gtctgcaccg tctaccataa acacatgatc agaagaatca
      181 atttctaagt gttccaatgg taatgtaaat tgaccatttc cagtgcccgc agatccccat
      241 tgttttataa atgtaccatt attagtaaac ttctgtattc ttgcactttc caactcatta
      301 acatatatgt ttccttcaga atccactgct attccgtgtg gatgattaaa ttcgccaggt
      361 cctgttccat ctttgccaaa ttttgagatg aaattaaaat tcttatcaaa taagagtata
      421 cgattatttc cagtatcagt taaataaaaa tttccatttt tatctatggt catatcttca
      481 ggacttgcaa attgatctgt ttcttggtca tcattagcat cgccgttttc atcttcattg
      541 tcttgattct tagttactga atcgccttga attgagttcc atgatttgat tggagttcca
      601 ttggtataca tcttttggac acgatcattt cctctatcga tgatgtaaag ataatcattt
      661 agatcaatta ccatactata gggactttga aattgtccta actcttcacc tttttctcca
      721 aattttgaaa taaattttcc gtcaggagta aatttttgta catcgttacg ttcacgatca
      781 tttacatata catcaccttt agaatcaaat actacatcat gtggacgtaa aaattgtcca
      841 tcttcagtgc cggaagaacc ccattgaaat ttgtaacaat aggctcccgt actggttgcg
      901 tttgttgttg ccagtaccgg tgttgtctct actgctgtac tggttgcgtt tgttgttgcc
      961 agtaccggtg ttgtattttt ttgtacattt atatcttgtt gactatatga taaagaaaac
     1021 agaatattga aggaatttat aatagaaata gagcaaacta aattaacaac aatcaagatg
     1081 gataggagta ttttgttcat tcgatgtatc tcgtaatata gactatatta atttatagca
     1141 gtttttatag ctaaataatt cagctaatta ttggttttat ctgttttagc agataaaaat
     1201 ttaatattta tataataaaa ccaaaaaaaa ctttatcaat ctaattcttt ttttatttat
     1261 agaaattatt aggagtaatt tttgattgac aacaaattat aaacaaaaaa tatgataatc
     1321 ctattatgag gtcgcataat atacaattaa tctttttata actccttttt tcagcacaga
     1381 cccctcgaag aagatcgaat attttatttt ctaataatct ttgcacttca caaattttaa
     1441 atcaaaatat ctgaaaatga ttaatttggt attgatatta tgtattgatt atgctttcta
     1501 caaatttaaa tataaaagtc tttgagtaca aagaatgatc tctatgtctt aagaacctgt
     1561 cccgtgaccg tatcgtataa cttctgaagt aaaatacagt aattctttct cgattattct
     1621 tacaatctgt ttcgctacat tcgaaatcaa ataattgaaa ttttaatttt gaagatattg
     1681 acttgaggtt attttttcaa taatcgcgaa taaaaaaatc agcttttatt taaaaaagct
     1741 atccttcctt gcaaatactt gattgccatt atcaaaactc tttacgagtc tcttttcaca
     1801 atgtgagtgt tctggtgggg ctagttcctc tccagtgaca caaataaaaa acatgtcacc
     1861 tatctgtact tgtcccaatt cagtatttct gttaaagata aatggaatat ctaatatatc
     1921 gttaccactc ttatcgtcga gtttttctag ctcttctttt gcatttatcg ttttgacctc
     1981 atattctcct ctcaccatcg ctactacgtt tatttgatcg acttcgtccg tcttatcgta
     2041 aagtggaatt tttgcgttta atttcacttc tttcgcagca ttattaccct gattacttaa
     2101 tttgttaaga tttacacttt cattaaattt gttcagagca taaaagagct tggctgaatt
     2161 tttgtccgta gaacctatat ttccttcgtc acaatcaaag atcggaattt cagtattttg
     2221 aatattttct gttttttgta tcccattgtt aaaaacataa ccacaaacaa aatattgatc
     2281 ttttattcca attgaggata tatcattact gttatcgtat tgtaaatttt tgatcagtat
     2341 gttatttgtc gcatgcgatt tttcttttgc tagatctata taaacttcct ttgcctctcc
     2401 attaacatat gatatcactt ttattgtttt tgcattctga tctatattgt ttaaattcaa
     2461 ttttattttg agttccattg ttcctttttg tttattatta tcttttacat cttcatcatt
     2521 ttcatcatct gattgggcat atattagatt tgagatatta taaaaaaata aagcagacga
     2581 aataatagct agaattacaa agcaaataaa taacttgtta tttacagaat tcatagggtg
     2641 ctattttttt tcctacctat attataaata tgctttgttg cgcaaataaa taatatgatt
     2701 gattttaatt aacccaatta ctcttaaaat tgttacaaga aaaacctgtg atcttgataa
     2761 tattcatact tgataatatc cttacttcac tcatacatac gttttataaa aaataaaaaa
     2821 taatcgcaaa aaaacccttg aaaaatccta atatagtgaa caatctttat gaagtatatc
     2881 tcaatatcac tgcaacaagt ctaccatttg tttttaggaa tttcgacgaa aggataaaga
     2941 caaatggata taaaaaatta tattgatgac actgatcact cgatataaaa tttagttaga
     3001 gtcattgata ttttct
//
LOCUS       DATIAS010000231         2006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_722088, whole genome shotgun sequence.
ACCESSION   DATIAS010000231 DATIAS010000000
VERSION     DATIAS010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722088"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..1515)
                     /locus_tag="VLA74_04505"
     CDS             complement(19..1515)
                     /locus_tag="VLA74_04505"
                     /inference="COORDINATES: protein motif:HMM:NF016563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH116 family glycosyl hydrolase"
                     /protein_id="HSF50003.1"
                     /translation="MSLVSQEEKEKEKKIFIERLNKFIEFTQSEVDKGVNPGGHYKAV
                     WTRDAAFILKDQFLSGHFKIALQQILLIWSNQIIATEERSLSLLYCTWKRKPLLFGRG
                     SPEMDFNPIIADDNTRKKFEGALPTTIYYEKGFCEVYGQNPDIDSIALMISTTSWILS
                     TLFDMKDNPTKSEPVITLSLNERMDNRRENEIPFSKFSLNDIINFLIPCMLRAIIYLQ
                     NRDIDDDGLLEQKHNEDWMDTTLRIGKVVYSQACWILALKNFSILLRKIGNKKESKRL
                     EEMTNRAISAVESKMWSAKDGCYIDLLEADLHLDEKMHNRLITQDISLYLIALTEENS
                     KDTSYKHIDNINMKDYSTKCKSHINNININLDIYQRALSTLEVLKKRAWKNNLPLVTE
                     TEITKTGPWLLKTNEYHNHTFWPWITGIEMLARTRFGKIDDCSLLLSKFVSNNGVHSN
                     MLYEWVNPLTFQGSGAYPFRTGISSLRIAAFESLTQKTLNITTTTIIR"
     gene            1630..1797
                     /locus_tag="VLA74_04510"
     CDS             1630..1797
                     /locus_tag="VLA74_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50004.1"
                     /translation="MDNKDIVTKDNEKNKEERNYEYKCKECGINFGNSLGDMELHKLT
                     VHLQKGDMEIE"
BASE COUNT          663 a          306 c          280 g          757 t
ORIGIN      
        1 aacctaaatg attttcaatt atctgatgat cgttgttgtt gttatattca atgttttctg
       61 tgtaagagac tcaaatgcag ctatccttaa agacgatatt cctgtcctaa atggatatgc
      121 accactgcct tgaaaagtca aagggtttac ccattcatat agcatatttg aatgtacacc
      181 attgtttgat acaaattttg atagcaaaag actacaatca tctatcttgc caaacctggt
      241 tcttgcaagc atttctatgc cagttatcca aggccaaaag gtatgattat gatattcatt
      301 tgttttaaga agccacggtc ctgtctttgt aatttctgtt tcagttacca aaggtaaatt
      361 atttttccaa gctcttttct ttaatacttc cagagtactt aatgcacgtt gatatatgtc
      421 taaattaata ttaatattat taatatgact cttgcatttt gttgaataat ctttcatatt
      481 tatattatct atatgtttat agcttgtatc tttactattt tcttctgtta atgcaataag
      541 atagagagat atatcttgtg tgataagtct attatgcatc ttctcatcca aatgtaaatc
      601 tgcttctaga aggtcaatat aacatccatc ctttgcagac cacattttac tctctactgc
      661 cgatattgct ctgttggtca tttcctctag cctttttgac tcttttttgt ttcctatctt
      721 ccttagtaat atggagaaat tttttaatgc aagaatccaa caggcttgac tataaactac
      781 ttttcctata cgtagagtcg tatccatcca atcctcatta tgtttctgtt ctaataatcc
      841 atcatcatct atgtctctat tttgtagata tattattgct cttagcatac atggaatcaa
      901 aaagttaatg atgtcattca atgaaaactt tgagaaagga atttcatttt ctcttctatt
      961 atccattctt tcattcagtg ataatgtaat tacaggttct gatttagtag gattatcttt
     1021 catatcaaac agagtggata aaatccatga tgttgtggat atcattaatg ctatagagtc
     1081 aatatctgga ttttgtccat atacttcgca aaaacctttc tcatagtaga ttgtagtagg
     1141 aagagcccct tcaaatttct tcctagtatt atcatctgca ataattggat taaaatccat
     1201 ttcaggagag cctcttccaa acaataaagg ctttcttttc caagtacaat ataagagaga
     1261 taacgatcgt tcttctgttg caattatttg attagaccaa attaaaagaa tttgttgaag
     1321 tgctatttta aagtgacctg atagaaattg gtccttgagg ataaaagctg catcccttgt
     1381 ccatactgcc ttataatggc caccaggatt tacacctttg tctacttctg attgagtaaa
     1441 ttcaataaat ttattcaaac gttcaataaa gatctttttc tctttctctt tctcttcttg
     1501 acttacaaga ctcactataa agcctgatcg ttgagttaaa ctattaaata gttttcgaaa
     1561 aaaattacta gatcaattta tctaaaatat ttatcaacta tttttgtaaa aagagattaa
     1621 gaagaaataa tggataataa ggatatcgta acaaaagata atgagaaaaa taaagaagag
     1681 agaaattatg aatacaaatg caaagaatgt ggaattaact ttggaaatag tttaggagat
     1741 atggaattgc ataaattaac tgtacattta caaaaaggag atatggaaat agaataatta
     1801 gtaattaata atatatgtat attttggtaa tatcttgatt gatatttttt ttggatctta
     1861 atttaacaaa ataaatttag ctgtgaatat tatcatactt ttaatttaat aaataaataa
     1921 ataacataat tggatttcta tctgttggcc tcgtttacta aatgaattca ttttttagat
     1981 tataaaattt tcaaatagtc ataatg
//
LOCUS       DATIAS010000232         2939 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1675921, whole genome shotgun sequence.
ACCESSION   DATIAS010000232 DATIAS010000000
VERSION     DATIAS010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2939
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675921"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1226
                     /locus_tag="VLA74_04515"
     CDS             <1..1226
                     /locus_tag="VLA74_04515"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HSF50005.1"
                     /translation="ILLPSLRKLTTDVRFKSDLGDSNIESLNLLLTNIKDRFDFYVYN
                     TDKGNDEEARRERKEVILIGGRIVKKMESILESLSLKGKNADMSINKESNSKLNYIVE
                     ELSLKEDDWDNLIYYIKEQQCVPFVGADTWSSKGVLSNLSEDWTALYDYPFEDSSQLS
                     RVAQFIAIDKGDPMYPKRALSKMLREIKPPDFSKVKDSPYLTLSSLNLPIYITTNYDH
                     TLEEALRFHKKNPQSEVCRWFDDLKTYLDNANKRSILKSSKYQPSRDEPLVYHLHGDM
                     DIPQSMVLTERDYIQFVINLSKEKEKYIFPPILRAALATSSLLFIGYSLEELNFRIIF
                     QAVLGLQVGDLRETSISVQLPPRLSQNKQKKALKYLREYIKDQKVYVYWGNSESFCND
                     LSKRLSLVPSQALRL"
     gene            1560..2270
                     /locus_tag="VLA74_04520"
     CDS             1560..2270
                     /locus_tag="VLA74_04520"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50006.1"
                     /translation="MFTLTTSLPDESWCTSVLREVRWKKNIICPRCQSNNVKKDGHYR
                     SYQKYFCKHCKRGFNDKTGTVFHYSHTPLKIWFLAMYLYFILWPGCSIREVSFEVVVP
                     YPRCYRFIRTVMEKLVSSLPSIATKLDGTVEGDEFYIKAGLKGRPYHDEIVKSGRKPR
                     RRGLKPWRGRGTFYKDYPMITCIHQRNGGITYFDVPVLQSLLDIICTRVEYGSTIFTD
                     EYIEHMTSWKNMVSYTKV"
     gene            complement(2755..>2939)
                     /locus_tag="VLA74_04525"
     CDS             complement(2755..>2939)
                     /locus_tag="VLA74_04525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50007.1"
                     /translation="MYGITAEGDNVKNPTVLVIPMYGITAEGDNVKNPTVLVIPMYGI
                     TAEGDNVKNVQGFCCE"
BASE COUNT         1012 a          461 c          473 g          993 t
ORIGIN      
        1 atatattatt accttcgctt aggaaactta caactgatgt taggtttaaa agcgatcttg
       61 gtgattcaaa tattgaatca ttaaatttat tgttaactaa tataaaagat agatttgatt
      121 tttatgttta caataccgat aaaggaaatg acgaagaagc cagacgagaa cgaaaagaag
      181 taatcttgat aggaggtcga attgtaaaaa aaatggaaag tattcttgaa agcttatcat
      241 taaaaggtaa aaatgctgac atgagtatca ataaagaaag taattcaaaa ttaaattata
      301 ttgtagaaga gttaagttta aaggaagatg attgggataa tttaatatat tatataaagg
      361 aacaacaatg tgttccattt gtaggtgctg atacttggtc ctcaaaaggg gtcctttcta
      421 atctttctga ggattggact gcactttatg attatccatt tgaagattca agtcaattgt
      481 cacgtgttgc tcaattcatt gctatagata aaggtgatcc aatgtaccca aaaagggccc
      541 tcagcaaaat gctaagggaa ataaaacctc ctgatttctc aaaagttaag gattctccat
      601 atttaaccct ctcttctctt aatcttccaa tttatattac tactaattat gatcatacat
      661 tagaagaagc tttaagattt cacaagaaaa atccccaaag tgaggtttgt agatggtttg
      721 atgatttaaa gacctattta gataatgcaa ataaacgttc tatcttaaaa agcagcaaat
      781 atcaacctag tagagatgag ccattagtct atcatcttca tggggacatg gatattccac
      841 aatccatggt tttaacagag agagattata tacaatttgt aattaattta agtaaagaaa
      901 aggagaaata tatatttcca ccaattcttc gtgctgcatt agcaacatca tctttattat
      961 tcatcggata tagtttagaa gaactaaact ttagaataat ttttcaagct gttttaggat
     1021 tacaagtagg agatttgaga gaaactagta tatcagtaca acttccccct cgattaagtc
     1081 aaaataaaca aaaaaaggcg ttaaaatatc ttcgcgaata tattaaggat caaaaagtat
     1141 atgtctattg gggaaattct gaaagctttt gtaatgattt aagtaagcgt ttatcattag
     1201 ttccatccca ggcattaagg ctctaactaa tataatattc acctcctcta actaaataat
     1261 gggagttgat tacttgtatt ctatggtcgt taaaatattg tccatttaca atttcttctc
     1321 ttttatcgat atctattatt gatttatgac taatattata ttccaattaa ttagtcagaa
     1381 aattacctat cttctttttc ttactctctc aatatgttat ttataaattc aagtaaactc
     1441 tattatttgc tatagtgaaa ttttcatttg ttgtccatat tattatgtta tttattctat
     1501 tcgctcttat tgacaaatgt ttcagccaag cttaaagctg gataacacaa atcaaagatg
     1561 tgtttacttt aaccacatct cttcctgatg aaagttggtg tacaagcgta cttcgagagg
     1621 tcagatggaa gaagaatata atatgtccac gttgtcagtc caataacgta aagaaggatg
     1681 gtcactaccg gtcataccaa aagtactttt gcaagcattg taaaagagga ttcaatgaca
     1741 aaacaggtac tgtatttcat tattcacata caccattgaa gatatggttt ttggcaatgt
     1801 atctgtactt tatactctgg cctggatgtt ctataagaga ggtatcattt gaggtagttg
     1861 taccatatcc aagatgctat agattcatca gaacagttat ggaaaagtta gtgtcatcat
     1921 taccttctat tgcaaccaaa cttgacggta ctgttgaagg tgacgaattc tatatcaagg
     1981 caggactgaa gggtaggcca taccatgatg agatagtgaa atcagggaga aaacctcgaa
     2041 gacgtggact aaaaccctgg agaggtagag gaacatttta caaggactat ccaatgatta
     2101 cgtgtattca tcaaaggaat ggaggaataa cgtattttga tgttccagta ctacagtcac
     2161 ttcttgatat tatctgtacc agagttgaat atggttccac catatttacc gatgaatata
     2221 tagagcatat gaccagctgg aagaacatgg tttcatacac aaaagtgtaa tccattcgca
     2281 gaaagaatac gcaaatgata ttgttcatgt gaataactgt gagtgcagaa gcaacctata
     2341 tcctagcaaa tatctaagaa atcatacatc tctacatcca ccttcttctt tatgaggtac
     2401 ttgtatagcc gctcggatat cggttcagtc acagcctcac tctcataagg agtatgttaa
     2461 ttttgaacct agcctgtata caatagggat tgtcacccaa taaagatttt catatagtca
     2521 cagccgataa taatctttca agtattaaaa atttctattt gatatttaaa taatgattta
     2581 gattattata ttttgactat tttcaaaaag aatctattaa tttcataaaa agttatttat
     2641 ctactaattg aaatattatt taatccaata ataggattta acaatggata atattagcct
     2701 ttatctaaat acaacaaaat ccttgaacat ttttgacatt atctccttct gctgttattc
     2761 acaacaaaat ccttgaacat ttttgacatt atctccttct gctgttattc catacattgg
     2821 tattactagt acagtaggat ttttgacatt atctccttct gctgttattc catacattgg
     2881 tattactagt acagtaggat ttttgacatt atctccttct gctgttattc catacattg
//
LOCUS       DATIAS010000233         2675 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1539378, whole genome shotgun sequence.
ACCESSION   DATIAS010000233 DATIAS010000000
VERSION     DATIAS010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539378"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            255..1190
                     /gene="tfb"
                     /locus_tag="VLA74_04530"
     CDS             255..1190
                     /gene="tfb"
                     /locus_tag="VLA74_04530"
                     /inference="COORDINATES: protein motif:HMM:NF012600.4"
                     /note="stabilizes TBP binding to an archaeal box-A
                     promoter; responsible for recruiting RNA polymerase II to
                     the pre-initiation complex; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription initiation factor IIB"
                     /protein_id="HSF50008.1"
                     /translation="MSKLAEKLQKPDTTKDNCFNCKNSNLVFDSISSEIICTDCGVVN
                     CEQFVSDDISADKSQNLEKNSLLIFDKGLSTTISQENVDAYGNQLNVKQISKAVKIRH
                     WNKISNSNRSYHRNLKKAFSILMRIKDKLSLSETIIEKSAYYYRKVVDLKIIKGRSIK
                     EFIVACVYVVCRELKVPRTISEIANSVNADKVFAGRCYRLLLRHLTINLPLIDSTTHM
                     TKIAGIAGITRHTIVRALEMMTLINENPISYGKDPTALSVATLYGACLEKGEKITQSK
                     IATAGNMSVVTLRKRFLDVKQIFPHLPDNALSKNE"
     gene            1236..1571
                     /locus_tag="VLA74_04535"
     CDS             1236..1571
                     /locus_tag="VLA74_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50009.1"
                     /translation="MSLKTEINFMQLVNKVIKDYDNNFVNNIKYHESVEIAILMWVQS
                     VKEKVGDLYSLRTTIQDATNELSYELRTTKDVINITRLSYSVDILKTCLFIIDIELEK
                     QKTSKMYVL"
     gene            complement(1697..2086)
                     /locus_tag="VLA74_04540"
     CDS             complement(1697..2086)
                     /locus_tag="VLA74_04540"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF50010.1"
                     /translation="MIIEDELDILLLYKDYLANKGYQVIGTSTTANEILKDYESSLPE
                     IIMLDYKLPGNMNGLEAAKMLLQKNKDLSIILVTAFDEVKKEINKDPFFSSKKISVLL
                     KPVRLNLLEKHIRDLSNIFPKKKYKQD"
     gene            complement(2367..2555)
                     /locus_tag="VLA74_04545"
     CDS             complement(2367..2555)
                     /locus_tag="VLA74_04545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50011.1"
                     /translation="MENIIRICRYEDDVDKKVVLLLLIDNLLPNKNKLKIPSYITRDY
                     IDVILNELEKKIEYQKLI"
BASE COUNT          956 a          380 c          379 g          960 t
ORIGIN      
        1 tccaaatatt gcttaatgat tatattaacc aatgcattga ttgaaattcc cattctgtcg
       61 gcttcttcat ctagaatctt agatagagaa tcttcaagcc taaatgaccg tgtaacagat
      121 ttcactatat ttgagaactc taatcgctta taattgtgtt tctttgtgtt ggcttgtagt
      181 tatttgtaat tattataatt tttttcgtac tatgtaaacc tatcctttat taattccaaa
      241 aataagttcc atctgtgagt aaattagcag aaaaattaca gaaaccagat acaacaaaag
      301 acaattgctt taattgtaaa aattcaaatc tagtttttga cagtattagc agtgagataa
      361 tttgtactga ttgtggtgta gtaaattgcg agcagtttgt tagtgatgat atttcagctg
      421 ataaatcgca aaacttggaa aaaaattcat tgcttatctt tgacaaagga ttgtctacaa
      481 caatttctca ggaaaatgta gatgcatatg gtaatcaact aaatgttaaa caaatctcaa
      541 aagcagttaa gatacgtcat tggaacaaga tatcaaatag taacagaagc tatcatagaa
      601 atttaaagaa agcatttagc attctaatga gaataaaaga taagttatca ttaagcgaaa
      661 ctatcatcga aaaatcagca tattattacc gtaaagtagt agacttaaaa ataataaaag
      721 gtcgttctat taaagaattc attgttgctt gcgtatacgt agtttgtaga gaattgaaag
      781 ttcctcgtac aataagtgaa attgctaatt ctgttaatgc tgataaagta tttgcagggc
      841 gttgttatcg tctacttctg agacacctga ccatcaattt accgttaatt gactctacca
      901 cccacatgac aaaaattgct ggtatagcag gtataactcg acatactatt gttagagcat
      961 tagaaatgat gacgttaatt aatgaaaatc ccatttctta tggaaaggat ccaacagctt
     1021 tatctgttgc taccttatat ggagcttgtc tagaaaaagg ggaaaaaata actcaatcaa
     1081 aaattgcaac tgcaggaaat atgagtgttg taacactgcg aaaaagattt cttgacgtaa
     1141 aacaaatttt ccctcatttg ccagataatg cattatcaaa aaatgagtaa aaaaatctta
     1201 cactaaaaat cgtatacttt ttttggtttt gattaatgtc tcttaaaact gaaataaatt
     1261 ttatgcaact agtgaataag gtaatcaaag attatgacaa taatttcgta aataatatta
     1321 aatatcacga atcagtcgag atagcaatcc tgatgtgggt ccaatctgtg aaagaaaaag
     1381 ttggtgactt gtattcttta aggacaacaa ttcaagatgc cacaaatgaa ttatcctacg
     1441 agctaagaac tactaaagat gtgataaata ttactagact ttcatatagt gtcgatatat
     1501 taaaaacatg tttattcata atagatatag aattggaaaa gcaaaaaaca tcaaaaatgt
     1561 atgtcttata aaactattat attaaagtct gtaagacagt caaatatata gaattttttt
     1621 gattataatt atatctacac ggtaaattct aaatctggat tgactataca tgtaagacat
     1681 caaaacatat tctaatttaa tcttgcttgt attttttttt tggaaaaata ttggataagt
     1741 cccttatatg tttttcaagt aagttcaatc taaccggttt aagaagtact gagatttttt
     1801 tactagaaaa gaagggatct ttatttatct ccttctttac ttcatcaaat gcagtaacca
     1861 atattattga taaatccttg tttttctgca ggagcatttt agctgcttca aggccattca
     1921 tatttcctgg taatttataa tctagcataa tgatttctgg aagagaactt tcataatcct
     1981 tcagaatttc atttgctgta gtagatgttc ctattacctg atatcccttg tttgccaagt
     2041 aatctttata caataataaa atatctaatt catcttctat aatcataatt tttttcgctc
     2101 tcaaattatt cgcattataa taactctata gctgttaaaa ttgtttatta tccttctaag
     2161 atgtttataa taatctaaac tggttttaaa caggaaattt tagtggtatt ttagtaaata
     2221 ttttgaaata taaaatatat aacaagaatt ctagataagg aaaaatcatt ttttattatt
     2281 agtggtggat atcataagat tgtagcatat ttctagatta aaattcaggg aaattgcagt
     2341 gaaattctgt attgtcatgt tatatttcat attaactttt gatattctat cttcttctct
     2401 agctcattta aaatcacatc gatatagtct cttgtgatat acgaaggaat ttttaattta
     2461 tttttgttag gcaacaaatt atcgatcaga agtaacagca caactttttt atctacatcg
     2521 tcttcatacc tgcaaattct tataatgttt tccaattttt ctgtaattcc caataaataa
     2581 tattaactaa caaactttat tagcattgta atctctttca atcacggcac tatgatatat
     2641 gattaacgtc tttacaagtt tttcacaatg ttctt
//
LOCUS       DATIAS010000234         2615 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_586710, whole genome shotgun sequence.
ACCESSION   DATIAS010000234 DATIAS010000000
VERSION     DATIAS010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_586710"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="VLA74_04550"
     CDS             <1..616
                     /locus_tag="VLA74_04550"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF50012.1"
                     /translation="LQEAIALYDKALEIEPNYTNALNNKGVALSKLGQQQEAIALYDK
                     VLEIEPNYTIALGNKGIALYNLGQLQEAIALYDKALEIEPNYTNALNNKGLALSNLTN
                     YEDAIKYYDKALTIDPNNLLFISNKGLTLVYMGDYGQAVELAENYLDENPDHWGLLCV
                     LKSAYEESNNISLADLYEEMLLELDPDYECKLIQILSVEEEDFI"
     gene            763..1977
                     /locus_tag="VLA74_04555"
     CDS             763..1977
                     /locus_tag="VLA74_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50013.1"
                     /translation="MYNHIFAAPSPSFERQEITDVDKDWIFWNPDSEEDRIYLQDNTQ
                     KSIPVAKNETHCKLDVEFSPQIKSVSYMSNGNRLNATMWMSSDLIEPVLEKNRLNKDN
                     FEKEVRIPLWKKIKFTISVDINSIFNQGIDYRIELVNERINTTSSKWFEILYEISADG
                     TEREVSRKSFDKFPFMNKNFVDFSIDLNKLSNPKIYKILLYVTDLYVNNGKLCRMVDT
                     TSWIVSPPPNFNIFVSDNPINMKPGEQKDLVVTIKGNTGLQAEAELYVNKTDPSVSLS
                     FPLSNKAIVSSLTNGSSTLHLNVSDSEFKSSKRVVFPIVANISFAPTITNKGGDTFYN
                     NKTTFLPKTVDLTVNIERSLSTLEKFEEYVNFLRPIGDVWQILTPIGAAILSLIYFIA
                     RKKKGKEKKEEK"
     gene            2111..>2615
                     /locus_tag="VLA74_04560"
     CDS             2111..>2615
                     /locus_tag="VLA74_04560"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF50014.1"
                     /translation="MDRSETVIIIKTSSAAISDSNNTDFQNNNTTKIEIEKLLDTARK
                     YYFSGDYNQSIIYLDKILEIEPNDTDALYNKGNALYNLGRLQEAIALYDKMLEIEPNY
                     TSALNNKGNALSYLEQIQEAIALYDKALEIEPNYTSALYNKGNALYNLGQLQEALKYY
                     DKVLKIDG"
BASE COUNT         1000 a          364 c          443 g          808 t
ORIGIN      
        1 actccaggag gcaatagcat tgtatgataa agcattggag attgagccaa actatacaaa
       61 tgcactaaac aacaaaggag tagcactatc taaacttgga caacagcagg aggcaatagc
      121 attgtatgat aaagtgctgg agattgagcc aaactataca attgcactag gcaacaaagg
      181 aatagcactc tacaatcttg gacaactcca ggaggcaata gcattgtatg ataaagcatt
      241 ggagattgag ccaaactata caaatgcact aaacaacaaa ggattagccc tatctaactt
      301 gaccaactat gaagatgcaa taaagtatta tgataaagca ttaacaattg atccaaataa
      361 tttacttttc atatcaaata aaggactaac attggtttac atgggtgatt atggccaggc
      421 agtagaactt gcagagaatt atctagatga aaatccagat cactggggtc tattatgtgt
      481 attaaaaagc gcctatgaag agtcaaataa tatatccctt gctgatcttt atgaagagat
      541 gttattagaa ctagatcctg attatgaatg taaattgatt cagattctta gtgttgagga
      601 agaggatttt atatgaaata ttatatagat tactcaaatt tattagtatg tagaatgaga
      661 ttttaccaga tagatgatga tgacatttac taaaatttta tttatttttt ctattttttc
      721 tatcacaata ttattttttt tcagtttata ggacttttta atttgtataa ccatattttt
      781 gctgctcctt caccttcttt tgaaagacag gaaattactg atgtagataa agactggatt
      841 ttttggaatc cagattcaga agaagatagg atatatctcc aagataatac tcaaaaatca
      901 attcctgtcg caaaaaatga gacacattgt aaacttgatg tagaattctc tcctcagata
      961 aaatctgtta gttacatgag taatggtaat agactaaatg caactatgtg gatgtcttca
     1021 gatttaattg aaccggtttt agaaaaaaat agattaaaca aagataattt tgagaaagag
     1081 gttcgtatac cattatggaa aaagataaaa tttactatat cagtagacat aaattctata
     1141 tttaatcagg gtatagacta taggatagaa ctagtgaatg agaggataaa tactacatct
     1201 tcaaaatggt ttgagatcct ttatgaaata tcagcggatg gaacagaaag ggaggtctca
     1261 agaaaatcct ttgataaatt tccttttatg aataaaaact ttgtagattt ttcaattgat
     1321 ttgaataaat tgagtaatcc aaagatttac aaaatcttat tatatgttac tgatttatat
     1381 gttaataatg gaaagttatg cagaatggta gatactacta gttggattgt ttcaccacct
     1441 cctaatttca atatttttgt atctgataat ccaatcaata tgaagccagg agaacaaaaa
     1501 gatttagttg ttactataaa aggtaacaca ggattacaag cagaagcaga attatatgta
     1561 aataaaacag atccttctgt tagtctatca tttcctttaa gtaacaaagc aattgtttct
     1621 tcgcttacaa atggaagttc cactttacat ctcaacgtat ctgattctga gtttaaaagt
     1681 tcgaaacgag tagtttttcc tattgtagca aatatctcct ttgctcctac tataactaac
     1741 aaaggtggtg atacattcta taacaataag actacctttt taccaaaaac cgtagattta
     1801 acggtaaata tcgaacgatc cctttcaaca ctagaaaagt ttgaagaata tgtcaacttt
     1861 ctgagaccaa taggggatgt atggcagata ctgactccaa ttggtgctgc aatattatca
     1921 ctaatatatt ttatagcaag gaagaaaaaa gggaaggaaa agaaggaaga aaaataagga
     1981 aggaaatgga aatgagaaaa ttgtaataat agatttagat atgtcgataa tcatgtatat
     2041 gaaaaattta aaatataata ttttattctc ttctgtctct ttattatttt taattgggtt
     2101 attttttatt atggataggt cagaaacagt aataataatt aaaacatcgt cagcagcaat
     2161 ctcggatagc aataatactg attttcagaa taataataca accaagatag aaattgaaaa
     2221 attacttgac actgctagaa agtattattt ttctggtgat tataatcaat ctattatata
     2281 tttagataag atcttggaga ttgagccaaa tgatacagat gcactataca acaaaggaaa
     2341 tgcactctac aatcttggac gactgcagga ggcaatagca ctttatgata aaatgttgga
     2401 gattgagcca aactatacaa gtgcactaaa caacaaagga aatgcactat cttaccttga
     2461 acagatacaa gaggcaatag cattgtatga taaagcactg gagattgagc caaactatac
     2521 aagtgcacta tacaacaaag gaaatgcact ctacaatctt ggacaactac aagaggcatt
     2581 aaaatattat gataaagtac tgaaaataga tggaa
//
LOCUS       DATIAS010000235         3677 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_995864, whole genome shotgun sequence.
ACCESSION   DATIAS010000235 DATIAS010000000
VERSION     DATIAS010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995864"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VLA74_04565"
     CDS             <1..416
                     /locus_tag="VLA74_04565"
                     /inference="COORDINATES: protein motif:HMM:TIGR02271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2382 domain-containing protein"
                     /protein_id="HSF50015.1"
                     /translation="NSMQEQKTSQTTKTETEQEENIPLTEERLDVSKRIEENQATITK
                     KPNKETKTVEVPLTREEVSIERRSPRGGSKTEAQNFPIQSEEEIKIPLKREEVEVTKK
                     PYVKEVAIKKKKVTDKKKVTEDVTSEELDTSNIKK"
     gene            771..1556
                     /locus_tag="VLA74_04570"
     CDS             771..1556
                     /locus_tag="VLA74_04570"
                     /inference="COORDINATES: protein motif:HMM:NF016925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese catalase family protein"
                     /protein_id="HSF50016.1"
                     /translation="MMQYFFQNMNFRGDAKPYQDLLRSIAAEEMGHVELVANTINVLL
                     EGASKQANPTELPLAVALESPNIHHFLVAAQSSRPVDAAGNPWSASYVYDSRNLVLNM
                     LYNLMLEATGRLQKCRLYQMSDNKAYRATVSYLIVRDLAHEKVFAKALETLGVDWNKT
                     LPIPKVDTSKMPEVKELERLNLHNQQWTMTNEQSGLSLIFNGESPFNDGGQLETLDGL
                     PEGAAIPNLPDAPQEFSPGLDAELKSKVKDLMNSTKSQGRKRS"
     gene            complement(2697..2825)
                     /locus_tag="VLA74_04575"
     CDS             complement(2697..2825)
                     /locus_tag="VLA74_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50017.1"
                     /translation="MVVTAVVVIAAIVTSIGSVYASFDLDLLEEYDPKLNNVVFDI"
BASE COUNT         1539 a          482 c          558 g         1098 t
ORIGIN      
        1 agaatagtat gcaagaacaa aaaacaagtc agacaacaaa aactgaaact gagcaagaag
       61 aaaatatacc attaacagaa gaaagattag atgtctctaa aaggatagaa gaaaatcaag
      121 caacaattac taaaaaacca aacaaagaaa ctaaaacagt agaagttcct ttaacacgag
      181 aagaagtaag tattgaaaga aggtctccac ggggtggaag taaaacagaa gcacaaaatt
      241 ttcctataca atcagaagag gagataaaaa taccattaaa gagagaagaa gtagaagtta
      301 caaaaaagcc ctatgttaaa gaagttgcaa taaaaaagaa aaaagttact gataagaaga
      361 aagtaactga agatgtaaca tctgaagaac tagatacatc caatattaaa aaataaaaag
      421 acaaataata aagacaataa aaaatctttt tttatttatt ttacaatttc atattatagt
      481 cattgaacta ctgcaaatat tagtagataa gtgaaattat ctggaatttt aaaagcattt
      541 ttgtttccaa aatttgagat agtaaagatt acaattttat aaaaaacagt ttaccttgga
      601 aagactattt tcatctatta caactgttat ataatttatt aaataaacaa ggtcatgttt
      661 atatcaataa ataaactgcc aaatcctatt cctaagaata ataagcctaa tcctaaagca
      721 gcacaagcat tacaagaggg acttgaggac aatttggaga aatgagaacc atgatgcaat
      781 atttctttca gaatatgaat tttagaggtg acgccaaacc atatcaagat cttttgaggt
      841 caattgcagc agaagagatg ggtcatgttg aattagttgc caatacaata aatgtcctat
      901 tggaaggagc atcaaaacaa gcaaatccta ccgaacttcc actcgctgta gcacttgaat
      961 caccaaatat acatcatttt ctagttgctg cacaaagttc cagaccagta gatgctgctg
     1021 gcaatccatg gtctgcatct tatgtgtatg atagtagaaa tttagtcttg aacatgcttt
     1081 ataatttaat gttagaagca acaggtagac ttcaaaaatg tagattgtac cagatgagtg
     1141 acaataaagc atatagagca actgtatctt atttaattgt aagagattta gcacatgaaa
     1201 aagtatttgc caaagcatta gaaacattag gagtggattg gaacaaaaca ttacctattc
     1261 ccaaagttga tacttctaaa atgccagagg taaaagaatt ggaaagattg aatttgcata
     1321 atcagcaatg gactatgaca aatgaacaat ctggcttatc tttaatattt aatggagaat
     1381 ctcctttcaa tgatggtggt caacttgaaa cattggacgg acttcccgaa ggagcagcaa
     1441 taccaaatct accagatgca ccacaggaat tttctccagg acttgatgca gaactaaaat
     1501 caaaagttaa ggatctaatg aattctacaa aatcccaagg tagaaaaaga tcataagaaa
     1561 gataatagta agatgatttc aagactcata aaggtgaaaa ggagcaatag ataaaagtag
     1621 ccttgaaatt aaatctttat cctttatttt ttgttattaa aaattatatc ttatatagga
     1681 taacccttag cctagaaatt ttattaaacc tatgaaataa gtgctctaat aatcagtatt
     1741 acatcattta ttaatatcgt tataaacttt attgtaatat ttacaatgaa aatatagatg
     1801 gtaaaaaaag aattacttga acaaaataat cctatgggaa tcaaatacat gttaggaaca
     1861 tgatgatgga taataatatc ctgttgttgt tcgcatcata aaatttgttt attgaattat
     1921 gacccagtct caaatatata aaaatccaga aaaaaaataa aaaataagtt atttagatga
     1981 tcgttgaaat aatagtagga atttataaag aatcaactat cacaacatta tattcaaaaa
     2041 atcttttaga attattcata tgtcagatat attttagttt aataaaaaca attcgtattt
     2101 cagaaaactt gtagaaaagc tttgttcaac attctcgcag atactataat gtagaatcgt
     2161 acgagattat actttcaaat ctacttgacg actttgataa acataaccca gataaatacc
     2221 ggtataataa cattggtata gataaataaa ataatataca tccggagaat gaatgctatt
     2281 ttttaccata cacgtaaatc attctcctca atggaaaaca gacatgattc aagattactt
     2341 ttttaggagt acaaagagat tcttaatatt atttataaag atttgagata atttgtaata
     2401 gaggaaatgt attttaaaag aagacaaaat gtagatagta aataattagg tttttgttaa
     2461 tatgatttta tactatgttg tgtattcttc tgtatcatgt cagaaataaa agacgaaatg
     2521 gaagatgcag gcgagaaaat gaaaagagga gcaaaaaaag caggcaacag aatggaagaa
     2581 ggtgctgaag aagcaaaaga taaagtagat taattaacta ctgactaaaa aatactatat
     2641 aactactatt cttttttatt tatttatttt ttatattatt tatcatattg tgatgttcaa
     2701 atatcaaaga ctacattatt gagttttgga tcgtattctt ctaataaatc taaatcaaaa
     2761 gaagcatata cagatcctat tgatgtaaca attgctgcta taactactac tgctgttact
     2821 accattcaat ttcttctaat gctaaataat ttataaatag aagcaaaaaa tcagcaatag
     2881 acaatagcag aaaataaatt aattatagat aacaagttac aaatagtacc tattacctca
     2941 ttatattaat aatataatat atggtgtgca agggaatatg ttcacgccat caagcaatga
     3001 gacctagtac tggtagagat atttgatagg acaaaagcgt tgtcaggttt gtcaaatctt
     3061 tattaattgg caaggttggt tttgcccatg ttgtggatat aaattgagaa ctaaacctag
     3121 aaataagaaa ttcaaacaac aactagtatt aagtaacaat atcaaaaaat aaaaatatca
     3181 aaacctataa tttatgatcc aaatcaaaat caaataaata tatggatata agaagataaa
     3241 gataataata ataatagtta caaacagggt catgaacgaa ttatcagaga tgcaaaagag
     3301 attaccaact actatttaga acttcacaag aatattataa atagatataa ttctgttatt
     3361 ctcaaatact acaaaataag atcgatttat ctcatgatct actttttact agtgctgaaa
     3421 gattgacaga ttattcattt gatattaaaa aaacaaggaa ttaatgcata attattaaat
     3481 aatttattaa atagatcatt atagtgagtt ctaacgatat tccttggaat gaaaccataa
     3541 aaaaagaggc aagaggaatt gatgatgctg attttggtga aatccaacgt gtcgatccag
     3601 aatatgttat aactcaaaaa ggtataattg ataaagaaat tttctccttt ccgataaatc
     3661 tagcccaaga ttatgat
//
LOCUS       DATIAS010000236         2159 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_41524, whole genome shotgun sequence.
ACCESSION   DATIAS010000236 DATIAS010000000
VERSION     DATIAS010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41524"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /locus_tag="VLA74_04580"
     CDS             complement(<1..939)
                     /locus_tag="VLA74_04580"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF50018.1"
                     /translation="MSVIIPARNEEKYIEKCLKTLIEQDYSNYEIVVINDSSSDRTAE
                     IIKNYSTTKSRVVYVNAEPKPDDWTGKNWACHQGYLKSTGDLFLFTDADTIHSLTSIS
                     LAVNHFLAEELDVLTAMPKILTTDFWTKITLPILWTLSLARYSALKANNPNSKIGYLF
                     GSFFIITRKTYEAIGTHKAVREEIVEDGALGRKLKEKGFKLKVVNGKDHIEALWARDP
                     STLWHGLGRLMISIYKREKIKACLMVIATFLLLLLPLIVLPFSIMSIVLQQEHITDYM
                     TNLNLVLLSLAITSILLLIITSILHLKYLIVQNIFYS"
BASE COUNT          760 a          293 c          342 g          764 t
ORIGIN      
        1 tgaatagaag atattttgaa ctattaaata ttttaaatgc aatatacttg ttattatcaa
       61 caataaaatt gatgttatgg ctaaagatag caacactaga tttaggttgg tcatataatc
      121 tgttatgtgt tcttgctgta acactatgct cataattgag aatggtaata caattagagg
      181 tagtaagagc aaaagaaatg ttgcaatcac catcaaacat gcctttattt tttctctttt
      241 gtatatggaa atcattaatc ttccaagtcc atgccaaaga gtagaagggt ctcttgccca
      301 taaagcctct atgtggtctt tgccattaac tactttaagt ttaaagcctt tctcttttaa
      361 ttttcttcct agtgcaccat cttctacaat ttcttccctt actgctttat gggtaccaat
      421 tgcctcatag gtttttcgtg ttattataaa aaaactgcca aagaggtatc ctatcttgct
      481 attgggattg tttgctttta gcgcggagta tctagccaaa gaaagagtcc aaagtatagg
      541 tagagtaatc tttgtccaaa aatcagttgt caatattttg ggcattgcag taagaacatc
      601 aagttcttca gctaaaaaat gattcacagc taaagagata gaggttaaag aatggatggt
      661 gtccgcatca gtaaaaagaa agagatcgcc tgttgattta agatatccct gatggcaagc
      721 ccaattcttt cctgtccagt catctggctt cggttctgca ttaacataca caactctaga
      781 ttttgttgtg ctataattct taattatttc agctgttcta tcagatgaag aatcattaat
      841 tacaactatt tcataattgg aatagtcttg ctcaattaaa gttttaagac atttctctat
      901 gtatttttcc tcatttcttg cagggataat tacgctcacc ttgggaaaaa cgatgttttt
      961 tttagatgct ataaaagatt gtagttttgg tacctgtatt agagatttta tagtataaac
     1021 aagaaagcat acccatgaaa agaaaacact agaaataata gcaattaaag ttattaatac
     1081 agcgaaatta tattctacca attaatataa gaaacatttc tttttacata taaataattt
     1141 ttaaattgtt ttatgcctac aatatatata aatacatcaa aatttatgac aatgttctaa
     1201 ataatgtaag tatcctttat ctattttggt atattttggg atcggagtgc ttcgagtata
     1261 acatgtaatt gggatcggtt atctgatata ttcaactttt atttcctatt ttagggacaa
     1321 tataaatgag atattgttaa agccggggtt aggagttgga cttcaaagtg tttttcgagg
     1381 tttatattat caataatgat ttgttcaatt tacagtttaa tattatttct aacataacaa
     1441 gttagcacta tatattatga ttaggcacta gtttatatat tgcaaaataa tagcatatag
     1501 tatgaatttc atagagaaca caaataacaa aatgaagtgc tcattttgtc aaaataattt
     1561 aaagtatatt gttagcaaac aaaaagatga tgatttaaga atggaaatct attcttgtct
     1621 gttttgcaat ataacgtata acgaatatcc aagaataatc aaagtttcga aaagaataga
     1681 gtaggaaaag aataacctta aatctttcct attctttttc catttctcca aaaaagaaaa
     1741 ttttcgcacc agtaaagaaa aaaattttat ggattggtaa gtggaatata tggaataatc
     1801 ggtttagatg tgatcgacag aggtaaaata tttggtatta cgagtgtggc attaggtgga
     1861 gctgcaatgg tttctgcttt aatggtgtga tatcaaatca aaagaacgca attagacaca
     1921 aaacaaatag ttatcgattt aaattatatt aaaaatatat agaaatatga atatatagtg
     1981 cctaatttaa caatcatctt aataattgaa ataaattagc tcttgtgttt tattaatagt
     2041 gaataaaaat aactactgat aactcttcaa atatatttgt aaagagatcg ttaatacctt
     2101 gtgatgtaaa taatcttttt gattatcatg cacgaaatgg agctttagaa agactcact
//
LOCUS       DATIAS010000237         2417 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_41842, whole genome shotgun sequence.
ACCESSION   DATIAS010000237 DATIAS010000000
VERSION     DATIAS010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41842"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VLA74_04585"
     CDS             complement(<1..914)
                     /locus_tag="VLA74_04585"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HSF50019.1"
                     /translation="MTQTITRNQVIEKIGNTPLIELSSFSTDSVKLFAKLEWYNPFGS
                     VKDRAAFWMIKDAESKGRIKKDKSIIIEPTSGNTGIALTGISSSLGYKVEIVIPEKVS
                     AETKSILKKLGAIIHETSDDLCPRVGAGTDQSIALATAISTPRPDIYYMPNQYENDAN
                     FMAHYESTGPEIWYQTNGKITHFLTGCGTGGTITGTGVYLKEKNPNIKVIAIQAQKNH
                     LLQGLRNFEESSMPDLFKRRESVVDEWFTATNKASFTMVKELANKENILVGPSSGSVM
                     SAMLETRNKIKKGIIVGIFADDGRKFKSL"
     gene            complement(916..1170)
                     /locus_tag="VLA74_04590"
     CDS             complement(916..1170)
                     /locus_tag="VLA74_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HSF50020.1"
                     /translation="MTDNNNNNDNFKKVIDVRGLYCPEPVFRTKIEMEKMTIGERLKV
                     VADDPQSEEDISRWVNRNGHDLVSINKKESDLEFVIKKAK"
     gene            complement(1245..2012)
                     /gene="cofE"
                     /locus_tag="VLA74_04595"
     CDS             complement(1245..2012)
                     /gene="cofE"
                     /locus_tag="VLA74_04595"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HSF50021.1"
                     /translation="MLKKIEIIPIYIDSQIKPTSNIVDTFLKAIKEKNNNRQVLENGD
                     IIVLAQKIVSKNEGRVIDLDDIIPSHKSIELSKQVDKDPRIIELILQESRKIIRIFNN
                     IIIAETHHGFICANAGIDQSNVSNKKDQVLLLPINPDKSAESIRKEIYQKTRKQVAVL
                     ITDTFGRPFRIGQTNVAIGIAGINPLKSYKGKHDMFGKILRVTEIAIVDEIAGAAELV
                     MGKTEGIPIAIVRNVNYSKRNSSITKIIRKKKKDIFR"
     gene            complement(2048..>2417)
                     /locus_tag="VLA74_04600"
     CDS             complement(2048..>2417)
                     /locus_tag="VLA74_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HSF50022.1"
                     /translation="ERLKKELGLDLIFSNELIFKNEILDDIELKVTSDKSLVVRPIIK
                     QLGIKKEEIVVVVDGANDLKLFDIAGYTVGFCPVDIVKNKADDVIEIRNLSLLKNLLE
                     KRFGNWILKTNQEEMKNKLK"
BASE COUNT          697 a          426 c          279 g         1015 t
ORIGIN      
        1 agactcttga attttcttcc atcatcagca aaaatgccta ctatgattcc ttttttaatt
       61 ttatttctag tttctagcat tgctgacatt actgaaccag aggatggtcc caccaaaata
      121 ttctctttgt tagcaagttc ctttaccatt gtaaaagagg ctttgttagt tgcagtaaac
      181 cattcatcca ctacactttc tcgtctttta aaaagatcag gcatagaaga ttcttcaaag
      241 tttcttaatc cctgcaataa atgatttttt tgtgcttgaa ttgcaataac cttaatattc
      301 ggattttttt ctttcaaata gacacctgtt cctgttatag ttcctccagt tccacaacct
      361 gttagaaaat gagtaatctt gccattagtt tgataccata tttcaggacc agtactctca
      421 taatgagcca taaaattagc atcattttca tattgatttg gcatatagta aatatctggc
      481 cttggagtcg atattgccgt tgcaagtgca atactctgat cagtccctgc tcctactctt
      541 ggacataaat catctgatgt ttcatgtatt atagctccta attttttaag tatagatttt
      601 gtttcagcac ttactttttc tggaataact atctcaactt tgtatcccaa agatgaggaa
      661 attcctgtta atgctattcc tgtatttcct gaagtaggtt ctataattat gcttttgtct
      721 ttcttgattc ttccttttga ttctgcatct tttatcatcc aaaatgcagc tctgtcctta
      781 acagaaccaa aaggattgta ccattctaat ttagcaaaaa gttttacgct atctgttgaa
      841 aaagaagata attctattaa aggagtattt cctatttttt ctattacttg atttcttgtt
      901 attgtttgag tcattttact ttgccttttt tattacaaat tctaaatctg attccttttt
      961 atttattgat actaaatcat gtccatttct gtttacccat cttgaaatat cttcttctga
     1021 ttgtggatca tcagcaacaa cctttaatct ttcacctatt gtcatttttt ccatttctat
     1081 ctttgttcta aaaactggtt caggacaata aagtcctctt acatcaataa cttttttaaa
     1141 attatcatta ttgttattgt tatcggtcat attctactat gttcctacta taaaaaaaag
     1201 ctgttgcaat ataaaatgtt tatgacttcc ttttatagtt aaattcatcg gaaaatatct
     1261 ttcttcttct ttcttataat ttttgtaatt gaactattac gtttagagta gttaacattt
     1321 ctaactattg ctatcgggat cccttctgtc ttacccataa ctagttctgc tgctcctgct
     1381 atttcatcaa caatagctat ttctgtaacc cttaaaattt tgccaaacat atcatgtttt
     1441 cctttataac tttttaaagg atttatacct gcaataccta ttgcaacatt tgtctgacca
     1501 attctaaatg gtcgaccaaa cgtatctgtt attaaaacag cgacctgttt tctcgttttt
     1561 tgatatatct ctttccttat tgattctgca gatttatcag ggtttattgg cagtaaaaga
     1621 acttgatcct ttttattact tacattactt tgatctatac cggcatttgc acaaataaaa
     1681 ccatgatgag tttctgcaat tataatatta ttaaatattc ttataatctt acgcgattct
     1741 tgtaatatca attcaataat tcgagggtct ttatctactt gcttactaag ttcaattgac
     1801 ttgtgggaag gaataatatc atcaagatca attactcttc cttcattttt tgaaacgatc
     1861 ttttgagcta aaactattat atcaccattc tcgagaactt gtctgttgtt atttttttct
     1921 tttattgctt ttaaaaaagt atctactata tttgatgttg gttttatctg gctatctata
     1981 tatattggaa ttatctcaat tttttttagc attagaattt attacaagaa attttttatt
     2041 tttttattta ttttagttta tttttcattt cttcttgatt agtttttaga atccaatttc
     2101 caaatctttt ttctaacaaa ttttttaata aagataagtt ccttatttct ataacatcat
     2161 ctgctttatt tttgactata tctacaggac aaaaacctac tgtataacct gctatatcaa
     2221 atagcttgag atcattagct ccatcaacaa ctacaactat ttcttctttt ttaataccta
     2281 attgtttaat tatgggtcta acaacaagtg atttatctga agtcacttta agttcaatat
     2341 catctaatat ttcattttta aaaattaatt cattagaaaa aattaaatct aaacctagtt
     2401 ctttttttaa tctctct
//
LOCUS       DATIAS010000238         2146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1950797, whole genome shotgun sequence.
ACCESSION   DATIAS010000238 DATIAS010000000
VERSION     DATIAS010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950797"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..171)
                     /locus_tag="VLA74_04605"
     CDS             complement(<1..171)
                     /locus_tag="VLA74_04605"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSF50023.1"
                     /translation="MNETSYGSILFYIGKQTITFLLLHYFQGHWDFPKGNKEKEESDI
                     DTALREITEETGI"
     gene            complement(200..349)
                     /locus_tag="VLA74_04610"
     CDS             complement(200..349)
                     /locus_tag="VLA74_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50024.1"
                     /translation="MYEHGFYEPHLKKWYCSYFIDEKEWLDIHDYLPNQLTNDQTTSL
                     EERNN"
     gene            complement(394..1206)
                     /gene="uppS"
                     /locus_tag="VLA74_04615"
     CDS             complement(394..1206)
                     /gene="uppS"
                     /locus_tag="VLA74_04615"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HSF50025.1"
                     /translation="MKIPIFTNPILFDLIFKLSGFYKIYERWLESQISRYVLPNHIAI
                     ILDGNRRWAKYHYFGVDRAHRFGAEKAEELLNWIYDLEIKITTIYVLSNENLERENEE
                     LTNIYALLSKKLTKLRDDNRIHKRKMKIKAIGNIELLPKNLQHILKILEEETSSYDSM
                     FLNIAVAYGGQQELVDAIKKIASMVSSGQLKVSDIDKKIIESCLYTSHLPQSDPDLIL
                     RTSGEKRLSGFLLWQSAYSELIFMDVFWPEFRKIDFMRAIRTYQNRRRRFGK"
     gene            complement(1267..>2146)
                     /locus_tag="VLA74_04620"
     CDS             complement(1267..>2146)
                     /locus_tag="VLA74_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF373 family protein"
                     /protein_id="HSF50026.1"
                     /translation="VAGKYNRGIEGDEKIGLEIQFLIKRFKADASVIVSDGEDDETVV
                     PVIQSLVPIISVQRVVIKHSRSVEYSYAVFGKYIKMLVYDPRYSKFFLGVPGALLVAS
                     GIATIFGLTREAIALVLSILGSAFIIRAFDIDKSIGALGKPTPTSFIRIFSLVAGLLI
                     IVVSIVNGLSHIPQEIVTQKLTNWEIVTNKQIVGSFIRGTILLMWIGIGTILAGTLLG
                     NWFRGSIKAMSDILRLVILILLYYPILQFTSVLTEGASPFNLISSLLIGLAITLVAAT
                     FLYQYYRNRKNGESIK"
BASE COUNT          726 a          364 c          256 g          800 t
ORIGIN      
        1 tatacctgtc tcttctgtaa tctctcttaa tgctgtgtct atatcacttt cttctttttc
       61 tttattccct ttaggaaaat cccaatgtcc ttgaaaatag tgtaatagaa gaaaggttat
      121 tgtttgttta cctatataaa ataatattga tccataagaa gtttcattca tcaagaaaaa
      181 tcactctgag tgattcaagt taattattcc tttcttctaa tgatgttgtt tggtcatttg
      241 ttaattgatt tggtaaatag tcatgtatat caagccattc tttttcatct ataaaataac
      301 tacaatacca tttttttaaa tgtggttcat aaaatccgtg ttcatacata ttatagatat
      361 tagccatgat atatttttaa gttattactt tctttatttt ccaaatcttc ttctacgatt
      421 ttgataagtt cttatagctc tcataaaatc aatttttcta aattcaggcc agaatacatc
      481 cataaatatc aattcactat aagcactctg ccaaagtaaa aaaccgctta atcttttttc
      541 accagaagtt cgtaaaatta aatctggatc agattgtgga agatgagagg tatatagaca
      601 cgattcaatt atttttttat caatgtcact tacttttaat tgaccagaac taaccataga
      661 tgctattttc ttaattgcat ccactaattc ttgttgccca ccatatgcta ctgctatatt
      721 taaaaacata gagtcatatg aagaagtttc ttcttctaag atttttaata tatgttgtaa
      781 gtttttaggt aataattcta tattacctat tgctttaatt ttcatttttc gtttatgaat
      841 acgattgtca tcccgaagtt ttgtaagttt tttactcaat agtgcataaa tattggttaa
      901 ttcctcattt tctcgttcaa gattttcatt agaaaggaca taaatggtag ttatttttat
      961 ttctagatca tatatccagt ttaacaattc ttctgctttc tctgctccaa acctatgagc
     1021 tctatctact ccaaaataat ggtatttagc ccatcttcta tttccatcta agataatagc
     1081 aatatggttt ggtaagacat atctagatat ttgagattcc agccatcttt cataaatttt
     1141 ataaaaacct gataacttaa atattaagtc aaataaaatg ggattagtaa aaatcgggat
     1201 tttcatttaa tatttttctg tgagttataa agtgtttaat acttatttat tttatattat
     1261 ttaatcttat ttaatagatt ctccattttt tctatttcta taatattgat ataggaaagt
     1321 agcagctact aaagttatag ccaatccaat aagtaaagaa gaaataagat taaaaggact
     1381 agctccttct gttaatacag aagtgaattg taaaattgga tagtataata gaattaatat
     1441 tactaaacgt agaatatcag acatagcttt tatacttcct ctaaaccaat tccccaataa
     1501 agtaccagct aaaatagtcc caattccaat ccacattaat aaaatagttc ctctaataaa
     1561 acttccaact atttgtttat tggtaacaat ttcccaattt gtcaattttt gtgtaacaat
     1621 ttcttgaggg atatgtgaaa gtccattaac gatagacaca acaattatta acaatcccgc
     1681 taccagcgaa aaaattctta tgaaacttgt aggagtaggt ttacctaatg cacctataga
     1741 tttatcaata tcaaaagcac gtattataaa ggcagagccc aatatgctta gaactaatgc
     1801 aatggcttcc cttgtcaaac caaatatagt agctattcca ctagccacca acaatgcacc
     1861 aggaactcct agaaaaaatt ttgaataacg aggatcataa actaacattt taatatactt
     1921 gccaaaaact gcataagaat attcaacact tctactgtgt ttaattacca ctctttgaac
     1981 ggatattatt ggtacaagtg actgaataac cggaactaca gtttcatcat cttcaccatc
     2041 agatacaatt acagaagcat cagctttaaa ccttttgatc agaaattgta tttccaatcc
     2101 aattttttca tcaccttcta ttcctctatt atattttcct gcaaca
//
LOCUS       DATIAS010000239         2548 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1269350, whole genome shotgun sequence.
ACCESSION   DATIAS010000239 DATIAS010000000
VERSION     DATIAS010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269350"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1240
                     /locus_tag="VLA74_04625"
     CDS             <1..1240
                     /locus_tag="VLA74_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50027.1"
                     /translation="ITDIKGRIIFNRRGSKTIEIDVVSDDRFLGRASAPSGASVGKGE
                     VQSFIENSPEKSLDAFNKNLSKFIGIESDDPKLVYEILKNIDNSKNYSVIGGSVAYAI
                     SLASIESASKALEVPLFKLLKPSGPYTFPYPLGNILGGGSHAGPGTPDIQEYLICPNG
                     AANIIEALEINFNIHKELKKILEKLDKRFTYGRGDEGAWAPNINNDQAIEVVEKAILE
                     CGYNLRKEVSIGIDFASSSIWNEKKQNYDYSRQELERSPEAQIDFVNNLIDRYHLIYA
                     EDPVHEEDFVGMSLITKNNPDCLVTGDDMLVTNKNLVKESLKYKSCSGAILKVNQAGS
                     LYDALEFANECNNNEIKIITSHRSGETIDSHIAEIAIATDSKMLKSGVLGGERIAKLN
                     QLIRLDEYGLIKGMSDVFTS"
     gene            1242..2018
                     /gene="rpsB"
                     /locus_tag="VLA74_04630"
     CDS             1242..2018
                     /gene="rpsB"
                     /locus_tag="VLA74_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HSF50028.1"
                     /translation="MSDDTEIINSDLNSNDASNAEIDEKKEIKELETQFDNSSNEIEN
                     IVEDNDESDIESSDVENLEKMILSTGIRVGTPVKTKSMSRYIVRPNPEGLYILDISKT
                     LYRIDVAAKFIGRTNISKVAVTSAREYGKKPVEKFCEATGATPILGRFMPGTFTNPSL
                     PKYMEPEIVIVTDPQADQQAVIESTRAGVPVIAISNSDNVISKVDLVIPANNRGRKAL
                     ATVYWLLAREVMKKQGKIKSDKEMRSTIDDFETKLVEEIA"
     gene            2015..>2548
                     /gene="amrB"
                     /locus_tag="VLA74_04635"
     CDS             2015..>2548
                     /gene="amrB"
                     /locus_tag="VLA74_04635"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HSF50029.1"
                     /translation="MRGLIYRSPYYSGSFYPKEKCDLNKILDFCFIDSPFGPQQISKI
                     NNNNKIYGLIVPHGAYIFSGAISANAFFAIKKQNIETFILIGPDHKGIGKRISIMSEG
                     YWQTPLGDVLINNAITNELKAHNNIIIEDKLVHQFEHSLEIQVPFLQYSRLNSFTIVP
                     ILLKDQDIKTSIRLGNSL"
BASE COUNT          969 a          348 c          459 g          772 t
ORIGIN      
        1 tattacagat ataaagggta gaataatttt taatagaaga ggaagtaaaa ctatagaaat
       61 agatgttgtt tctgatgata ggttccttgg tcgagcatct gcaccttctg gtgcaagtgt
      121 cggaaagggt gaagttcaaa gttttataga gaatagtcca gaaaaatcat tagatgcatt
      181 taataaaaat ttgtcaaagt ttattggaat agaatcagat gaccccaaat tagtatatga
      241 aattttaaaa aatattgata atagtaaaaa ctatagtgtt ataggtggtt cagttgctta
      301 tgcaataagt ttagcttcaa ttgaatcagc ttccaaagct ttagaagttc cactctttaa
      361 gttattgaaa cctagtggcc cctatacttt cccttatcct ttaggaaata ttttgggagg
      421 aggctctcat gctggacctg gaactccaga tattcaagaa taccttattt gtccaaatgg
      481 cgcagctaat ataatcgaag ccttagaaat taatttcaat atacataaag aattaaaaaa
      541 aatattagaa aaactagata aaagatttac ctatggtaga ggtgatgaag gagcttgggc
      601 tccaaacatt aataacgatc aagctataga agtagtggaa aaggcgattt tagaatgtgg
      661 ctataatcta agaaaagaag tatcaatagg aatagatttt gcaagttctt caatatggaa
      721 tgaaaaaaaa caaaattatg attattctag acaagaattg gaacgttctc cagaggctca
      781 aattgatttt gttaataatc ttattgatag atatcattta atttacgcag aggatccagt
      841 tcatgaagaa gactttgtgg ggatgtcact tatcactaaa aataatccag attgtttagt
      901 aactggtgat gacatgcttg taaccaataa aaatctagtt aaggaatctt taaagtacaa
      961 atcctgctcg ggcgcaatat taaaagttaa tcaagcagga tcactgtatg atgcgttaga
     1021 atttgctaat gaatgtaata acaatgagat aaaaataatt acttctcatc gatcaggtga
     1081 aacaattgat tctcatattg cagaaatagc aatagctacc gattctaaaa tgctaaaatc
     1141 gggtgttctt ggaggagaaa ggatagctaa actgaatcag ctaattagac tagatgagta
     1201 tggtttaata aaaggaatgt ctgatgtttt cacatcataa tatgagcgat gatacggaaa
     1261 taatcaatag tgatttaaat tctaatgatg catctaatgc tgaaattgat gaaaaaaaag
     1321 aaataaaaga attagaaact caatttgata attcttcaaa tgaaattgaa aatattgtag
     1381 aagataacga tgagagcgat attgaaagtt cagatgtcga aaacttggaa aaaatgattc
     1441 tatctaccgg tataagagtt ggaaccccag ttaaaactaa atcaatgtct cgctatatag
     1501 ttagaccaaa tcctgaagga ctttatatat tggatattag taaaacatta tatcgaatag
     1561 atgttgccgc taaattcatt ggtaggacaa atatttctaa agtagcagtt acttctgccc
     1621 gggaatatgg taaaaagccg gtagaaaaat tctgtgaagc gacaggtgca acccctattt
     1681 taggaaggtt tatgcctgga acatttacta atccttcatt accaaaatat atggagccag
     1741 agatcgtcat agtaactgat cctcaagcag atcaacaagc tgtaattgag tcaacaagag
     1801 caggagttcc cgtgattgcc atatcaaata gtgataatgt tatctctaaa gtcgatttag
     1861 tcattccagc taataacaga ggaagaaaag cattagctac agtttattgg ctattagctc
     1921 gggaagtaat gaaaaaacaa ggaaaaataa aatcggataa agaaatgaga tccacaatag
     1981 atgattttga aacaaaactt gtcgaagaaa tagcttgaga ggtttaatat atagatctcc
     2041 ttattattca ggttcatttt atccaaaaga aaaatgtgac ttgaataaaa tacttgattt
     2101 ttgttttata gacagtccat ttggacctca acaaatttca aaaatcaata ataataataa
     2161 aatttatggg ttaattgtcc cacatggtgc ttacatattt tctggagcca tatctgcaaa
     2221 tgcgttcttt gcaattaaaa aacaaaatat agaaacattt attctaattg gaccagatca
     2281 caagggaatc ggaaaaagaa tttcgataat gagtgaaggt tattggcaaa cacctttagg
     2341 agatgtttta attaataatg caattactaa tgaattaaag gcacataata atataataat
     2401 agaagataag ctagtccatc aatttgagca ttctttggag atccaagttc ctttcctcca
     2461 atattcaagg ttaaattctt ttaccatagt tccaatttta ttgaaagatc aagatattaa
     2521 aacatctata aggctaggca attcatta
//
LOCUS       DATIAS010000240         4923 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_997659, whole genome shotgun sequence.
ACCESSION   DATIAS010000240 DATIAS010000000
VERSION     DATIAS010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4923
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_997659"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1774
                     /locus_tag="VLA74_04640"
     CDS             239..1774
                     /locus_tag="VLA74_04640"
                     /inference="COORDINATES: protein motif:HMM:NF018905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HSF50030.1"
                     /translation="MNDHHDNNRDSLEGKHESIHLDTVAVHLALLRTGKIIAFTGDDM
                     KIGDWNIGKSSLWDPVNPNVKENPSLGRNMFCAGHCFLSDGRLLVAGGQSTVHPPFTN
                     GILSFFGILQLFTKGADHDILVFDPQTQTWNRHNNMPKARWYPTCVTLPDGRALIVSG
                     VYSQAHNFVFKNGFVNQTYEIFNPSTNSLTTPKPFLKKIKAYPFLHVLPGGTLFVHSE
                     YTTRLINLTDFVPYSEKFETKHKGTRTYPGMGCCTLLPITQSDTDFKILIAGGSKVIS
                     PNNKTDTTNTAEIFTLKSNNLSKSGWDIVKSTNKKRFLSDSVLLPDGTVLVTNGAAIG
                     TSDDNKEAVREIELYNPENDTWTIIDELDRDRLYHSSALLLTDGRVVAAGSTGHKWST
                     NPEHYEKEIEIIIPPYLKDNPQRPNISHCPLEISYNSTFEVKSPDSSEITKVVLIKNS
                     STTHNNNMDQRCLVLQILDQVNNILILSAPQDGTYAPPGHYMLFILDKKNVPSIAKIV
                     MVH"
     gene            2360..3106
                     /locus_tag="VLA74_04645"
     CDS             2360..3106
                     /locus_tag="VLA74_04645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50031.1"
                     /translation="MTKIKLLFTCPHNGTQQMDKIRNEDNLNNTCNPDEFSIENDIGT
                     EDLTERIVTHIKRLSGKDPYKQIAEVDREYVDHNREELCAYVESDLRAQTAYREYHKG
                     ILQIIEEMLPQNENGIAFLFDIHGTDNVEIKGNFIEVIIGTDKGNSRQSLTEINPDYF
                     WGPHGFIPLLKKKGIRVFPRNESEERMDFELDGGYTIKTYGSSQPQPRKGLVAIQIEV
                     IRSIRGGLYCREKFAADIADCIWTFVYPFI"
     gene            complement(3951..4115)
                     /locus_tag="VLA74_04650"
     CDS             complement(3951..4115)
                     /locus_tag="VLA74_04650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50032.1"
                     /translation="MVNIDILQRLYSYTRKLASQRNFIIIFATIKEMIFGRKHGISPK
                     KKIQKEYYKK"
     gene            complement(4221..4511)
                     /locus_tag="VLA74_04655"
     CDS             complement(4221..4511)
                     /locus_tag="VLA74_04655"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF50033.1"
                     /translation="MKYDWDASTYDLISHAQESWGHGIIEYRNWKGNEIVLDAGCGSG
                     RLTKILSHKVPQGKVIAVDSDSSMIRLAKENLIKFSNIEFIKMDVSENLQKK"
BASE COUNT         1735 a          727 c          753 g         1708 t
ORIGIN      
        1 aaacaacata ttatctaaag tgggtgcggt gggaaccatg tggaatttca cacttgtttg
       61 gttgctccag tcagttggtc agtaactctt atttgttttc caattcttat acgtatgact
      121 ttagaaatat ttgttactaa caacactaat ttataacagc atataacaag aagtattttt
      181 catcatatta agtgtgacca gaagaaggtt tttaagaaat aactcgtaac tcaattggat
      241 gaatgatcat catgataaca atcgtgatag tcttgaggga aagcatgaaa gcattcattt
      301 agacactgtc gctgttcatc ttgctctttt aagaacaggg aaaattattg cgtttactgg
      361 agatgatatg aaaattggag attggaatat tggaaaatcg agtctttggg atccggtcaa
      421 tccaaatgtt aaagaaaatc cttccttagg tagaaatatg ttttgtgctg gacattgttt
      481 tctttcagac ggacgcttat tggtagccgg aggacaatca acagtgcatc caccatttac
      541 aaatggtatt ctatcatttt ttggcatatt gcagcttttt acgaaaggag ccgatcatga
      601 tattcttgta tttgatcctc agacacaaac ttggaatcgt cataataata tgccgaaagc
      661 taggtggtat cctacatgtg ttacattgcc tgatggcaga gcactaatag tttccggagt
      721 ttattcacag gcgcataatt ttgtattcaa aaatggtttc gtaaatcaga cttatgaaat
      781 attcaatccg agtaccaatt cacttactac tccaaaacct tttttgaaaa aaataaaagc
      841 ctatcctttt cttcatgttc ttccgggagg aactcttttt gttcatagcg agtatactac
      901 aagactaata aacttaacag atttcgtacc gtattccgag aagtttgaaa ctaaacataa
      961 aggaactaga acatatccgg ggatgggttg ttgcacatta ttgcctataa cccaaagtga
     1021 tactgatttc aagattttaa tcgcaggagg tagcaaagta atttctccaa ataataaaac
     1081 tgacactaca aatactgcag aaatttttac cttaaagtca aataacttga gtaaatcagg
     1141 ttgggatatc gtcaaatcta caaataaaaa aagattccta tctgactcgg ttcttcttcc
     1201 ggacggaaca gtactggtaa caaacggagc tgccattggc acatctgatg ataataaaga
     1261 agcagtaaga gaaattgaat tatacaatcc cgaaaatgac acttggacta taatcgatga
     1321 gttggataga gacagactat accattcttc tgctttacta ttgacagatg gcagagtagt
     1381 tgcagcaggt agcacgggac ataaatggtc tacaaatcca gaacattatg aaaaagaaat
     1441 tgaaataata ataccgccct atttgaagga taacccccaa cgtccaaaca ttagccattg
     1501 tccgttggag atatcttaca atagtacctt tgaggtaaaa agtcctgatt cttcagaaat
     1561 aactaaagtt gttctcataa aaaactcgtc cacaactcat aataataata tggatcaacg
     1621 gtgtctcgta ttgcaaattt tagatcaagt gaataatatt ttaatattat ctgctcctca
     1681 ggacggaact tacgcaccac caggacatta catgctattt attcttgata agaaaaatgt
     1741 tccatcaatt gcaaagatcg taatggttca ctagaagttt ttgcagtgtt gttaatatca
     1801 attttataat atttacaaaa aatagattgc aaatagataa attttatatc aaattcggtg
     1861 gaactaataa tgctagccta ttttcttatt ccgagaatca tactatatct catgaaagat
     1921 tataatatct ttattataga acctatcatt tatctacaag tatgctttca aactgataaa
     1981 tagcttttat tagaaattct atttattaat agagattttt caataattat attctaatgc
     2041 tttttgttta tagatgaaaa tgagaaaagc aagtacttcg atcaattttc ttttatgatt
     2101 tctattacag atttgtagag aaaagaattc ctgccaaacc gattatctag tttaagatag
     2161 tttattactc atctctcttt tctctctttc aggcggctac taatcattat agaaattatt
     2221 taccctagtg atggtaatta gaaaatgagt aatggtaatc agaaattgca aatacactta
     2281 catatagaaa gtaacttata ctaattaaat gtctagtaaa tgtttataaa tatgccatta
     2341 ttcattaacc tgtaattaca tgacaaaaat aaagttgtta tttacatgtc cacataatgg
     2401 tacacaacaa atggataaaa taagaaacga agataatctc aataatactt gtaatcctga
     2461 tgaatttagc atagaaaatg atattggaac cgaggacctt actgagcgta ttgttacaca
     2521 tataaaaaga ctaagcggaa aagacccata taaacaaatt gcagaggttg accgggagta
     2581 cgtcgatcat aacagagaag aactatgtgc atacgttgag tcagatcttc gagctcaaac
     2641 agcttacagg gaataccaca agggaatttt gcaaataatt gaagaaatgc ttcctcaaaa
     2701 tgagaatggt attgcctttc tatttgatat tcatggtaca gacaatgtag agattaaggg
     2761 taattttatt gaggtaatta ttggaacaga taaaggaaat tcgaggcaat cattgaccga
     2821 aattaatcct gattatttct ggggtcctca tggtttcata ccgctattaa aaaaaaaggg
     2881 tataagagta ttcccccgta atgaaagtga agaaagaatg gatttcgaac tggacggagg
     2941 atacaccata aaaacatatg gtagttctca acctcaacca agaaagggac tggtagcaat
     3001 acaaattgaa gttattcgtt ctatcagagg aggtctatat tgccgtgaaa aatttgcagc
     3061 agatatagct gattgtattt ggacgtttgt ttatccattt atttaagtat aaatcatttc
     3121 acattgttat agtatgtagt catttaatta ttctatcgta agactaattt cacttaattg
     3181 tatctgtatg gaaatacata taatcgtagt atattattct tagttagatg tactattata
     3241 ttctgaatac tggaaatgga aatggaatat gataataccc tatataagat ttttaaagat
     3301 atttaaatat caaaagaatt tgttctaatt atttaagaac ttaactgcat tataatatta
     3361 tttagatctg aatgttatca aatcaagaaa agtaattacg tttttcaatt tatagatctt
     3421 taattattaa ttttatttaa cggaaataag aaatttttaa tgtctaacag ataaaagtaa
     3481 ttttcgggcg cctcaaaaat tataatatct attttttttg tctttaacta atacaatcta
     3541 gtctttgctt tttattatta attgaataaa tattaatatt tgttcttaat taagaatttt
     3601 gttcttttct aaatcaaaag attagctaca tttttgtatc tttctcagtg ggatgtgaaa
     3661 caaatttgac tcaattttgg tctcactttt gaaaatgtgt aatattcaaa cataataaac
     3721 ttatttttat tgcattaatg ttcgcctaac aaaatctaat ttccattgta attcttttgc
     3781 attagtttca atttcctgta ttaccaattt agcaaactta tcttttagca tatgattggg
     3841 taaatatttt aggtatggta ttagaacaat tgtttttagg aaaagatatt cttcattctt
     3901 atggaaatta gcttctttat cttccagaaa gacttggata ttcctaaaac ctatttcttg
     3961 taatattctt tctgtatctt cttttttggc gaaataccat gttttcttcc aaatatcatc
     4021 tcctttattg ttgcaaaaat aattataaaa ttcctttgac ttgctaactt tcttgtgtat
     4081 gaataaagtc tttgcaagat atctatgttc accacattga attaatagtt tacctccgga
     4141 gtgtagaatt tgccagaagt gttcaaaaac ttttttatga tttaaaatcc aatgtaacgt
     4201 ggcatttgaa aatacaacat ctactttttc tgtaagtttt cagagacatc cattttgata
     4261 aattcaatat tagaaaattt tattaggttt tctttagcaa gtcttatcat agacgaatca
     4321 gaatctactg caataacttt tccttgtggc actttatgtg ataatatctt agttaatctt
     4381 ccagaaccac aaccagcatc aagaactatt tcatttccct tccagtttct atattctatt
     4441 atcccatgtc cccatgattc ttgtgcatgg gagataagat catacgttga ggcatcccag
     4501 tcatatttca ctaacagata ttgctcttag tatttatata aggttatttt agaagatggt
     4561 gttatcagat aatttttaaa cggaatctaa tgattattaa aaaaatataa tgaattcaca
     4621 aagttaaaaa aattatctat attgttaatc gcatcaattt ttgttgcact ttatccttta
     4681 taataatgtt attgtatata gacaaatata aataacaatt tatttgagtc aattacaaat
     4741 taatacaaat ttacccaatg agaatataga aaataataga tcgaaaagag aataagaaat
     4801 gaaaagataa attttataaa ataattgaat gttacttaaa tgttttttta tcatggaaat
     4861 attacaatta attttctaat acatgaaaaa tttgataaaa tataagaaat tatcaataaa
     4921 ata
//
LOCUS       DATIAS010000241         3813 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_997875, whole genome shotgun sequence.
ACCESSION   DATIAS010000241 DATIAS010000000
VERSION     DATIAS010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_997875"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..649)
                     /locus_tag="VLA74_04660"
     CDS             complement(<1..649)
                     /locus_tag="VLA74_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50034.1"
                     /translation="MSISGRNSNTTTFVNNNTNLDISNLVYDIDSKPFNVSYVDWTEK
                     WWQWTYSIPWDRNPSYDDTGKYCSENQSGPVWFLTLAYKHPVTRTCDIPENTALLITL
                     LNSECSYAEFPLLKTEEELRECAKRMQDLVVGVNASLNKVHVPNLENYRIQTDVFNFT
                     LPEYNILNLTSQTTQAVADGNWLFLKPLPAGTHELKVKGDVNATSTIEEINGNEYD"
     gene            complement(1220..1456)
                     /locus_tag="VLA74_04665"
     CDS             complement(1220..1456)
                     /locus_tag="VLA74_04665"
                     /inference="COORDINATES: protein motif:HMM:NF025392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-binding protein"
                     /protein_id="HSF50035.1"
                     /translation="MPKFLDVHSLKGFEEETLSKLQQSPVDEFGITHLNIMYNKEEDK
                     FFCLLDAPNREAVENHHHKHGVRCEWITEVKTTS"
     gene            complement(1670..2749)
                     /locus_tag="VLA74_04670"
     CDS             complement(1670..2749)
                     /locus_tag="VLA74_04670"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF50036.1"
                     /translation="MKNFSSQEIRFSGDSIKSCVVFIDLVDSTQNTITMDKLEHIRIY
                     YSKFMNSISKIVKNYGGKVIKNIGDCLLLYFPKASDTKNEKAFREVIECGLKILDSRY
                     AVNQELSKQHLPPFSYRISMDFGVLDLALVGDYSQIDLFGATVNRCSKINSSLSIANQ
                     IIIGDNFYRILKSFSNIAKNYKFINNGECMITETIGYSTYTIKKINELYLGNSSTTST
                     EDFIETKSEKDLFFPQRNNNKRIILVDDDPDILFTYESFLKDNGYEITSFTNPCKALN
                     FIKDLPNFNDLLVTLDIKMKDLNGFQLQQQIKSIDPTIKILFISVLDIPEEILTIIPG
                     LSKEQILIKPVDRKVLISTVKKLLN"
     gene            complement(2810..3424)
                     /locus_tag="VLA74_04675"
     CDS             complement(2810..3424)
                     /locus_tag="VLA74_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50037.1"
                     /translation="MTIHWTSLSTFIYLSSGNIIMLTKEEIKRNETIAVNKPEFNEKN
                     TGKLNKGNSNFNERTNRITNTINEYQKTKNYSLEKSLDTANKYQQQNIDTIQSISNNY
                     IQLQKNILNTYQSVFSKFIDNMYNNKSYWNKFIYPQGYTDVYSNTNQNITDNAINDTR
                     RINDCVFGYTETVNKSIEIAQKYYNDSVQNFFSFVNKVQKSYSH"
BASE COUNT         1301 a          518 c          528 g         1466 t
ORIGIN      
        1 tatcatattc atttccatta atctcttcta tagtagaagt tgcattaaca tcacctttta
       61 cttttaattc atgtgtacca gcaggaagag gtttaaggaa taaccaattt ccatctgcaa
      121 cagcctgtgt cgtctgagaa gttaaattca aaatattata ttcgggtaaa gtaaaattga
      181 aaacatcagt ctggatacga taattttcta aatttggtac atgtacttta ttaagtgaag
      241 catttactcc aactacaagg tcttgcatac gtttagcaca ttctcttagt tcttcttcag
      301 tttttaataa tggaaattct gcataagagc attcagaatt taatagagtt ataagcaacg
      361 cggtattttc aggaatatca catgtacgag taactggatg tttataagct aaagttagaa
      421 accaaactgg tccactttgg ttttcactgc aatattttcc agtatcatcg tatgagggat
      481 ttctatccca aggaatagaa tatgtccatt gccaccattt ctcagtccag tctacatatg
      541 aaacattaaa aggcttggaa tctatgtcgt aaactaaatt agaaatatca agatttgtat
      601 tattatttac aaatgtagta gtattggaat tccttccact aattgacatt acattggcag
      661 agtataccag aagtaaaatt aaaatcaagg taaaaaaact tgttgtcagc aaaaattttc
      721 tcatgtaaat gccacattga ttatatttaa tgaacttttc tcagtttgtc tctctttctc
      781 atatgtaaat accttttttt gctttctagt atggacctat agataaagaa acttcttgta
      841 atggagactt ttttattcct agtatcatcg gtatagaagt catgtaattg agtctggagt
      901 atacctaaag cggttctaaa ataagaatct aatgtaaata tactactaac tcgtatttgc
      961 atctattatt agatacttat tctttaaaat tattcaatat tagatagata tattatgaat
     1021 gtgtaaatta tcatttctgt aatcagacaa aaaaagtaaa attagataat tcgaacctat
     1081 attagattag atggaagata acgcgagaat tacaatttat gaacccgaaa aaagataaaa
     1141 taacctaatt gttatttccc tttattttgc taatattatt tatcaaatat ttaaataaat
     1201 tgatacaatc taaagtatct taagaggtag ttttcacttc tgttatccat tcacacctga
     1261 caccgtgctt atgatgatga ttttctactg cttctctatt gggtgcgtca agaaggcaaa
     1321 agaacttgtc ttcttctttg ttatacatta tattaagatg tgtaattccg aattcatcga
     1381 caggagactg ttgcaatttg cttaaagttt cttcctcaaa tcctttcaag gagtgaacat
     1441 caaggaactt gggcatagac ctaagttctt atagttttgt atatatattt gcttttttgc
     1501 aattcataga attgcttgac tatagcagta ttacagaatt agaaagcttt ggtttataga
     1561 aataaatacc gataggggtg cgaaaataag agtctaatgt gatagtaata agataataat
     1621 atttaagatt tactttgcat cttaataatg ataagaaagt tgaattttac taatttaaca
     1681 attttttaac agtacttatt aatacctttc tatcaacggg ttttatcaat atttgttcct
     1741 tggataaacc tgggattata gttaatattt cttctggtat gtctaaaaca cttataaaaa
     1801 gaattttaat tgtgggatcg attgatttta tttgctgttg taattggaat ccattcaaat
     1861 ctttcatttt gatatcgagt gttactagta gatcattaaa atttggaaga tctttaataa
     1921 aattcaatgc cttgcaggga tttgtaaaag atgttatttc ataaccatta tcctttaaaa
     1981 atgattcata agtaaaaagt atatctggat catcatcgac taaaattatt cttttgttat
     2041 tgtttctttg aggaaaaaac aaatcttttt cacttttagt ttctataaag tcttcagtag
     2101 aggtagtact actattacca agatacaatt cattaatttt ttttatagta tatgtagagt
     2161 atccgattgt ttcggttatc atacattcac cattatttat aaatttataa ttcttagcaa
     2221 tatttgaaaa cgattttaga attctataaa aattatctcc aataattatt tgatttgcaa
     2281 tagacaggga tgaatttatc tttgaacagc ggtttacagt tgccccgaat aaatctatct
     2341 ggctataatc accaactaaa gctaaatcta aaacaccaaa atccatacta attctatagc
     2401 tgaatggggg aagatgctgc ttggataatt cctgattaac agcatagcgg gaatctagga
     2461 ttttcaagcc acattcaatc acttctctaa aagccttttc gtttttagta tcagatgcct
     2521 ttggaaaata taataataaa caatcaccaa tatttttaat aactttccct ccataatttt
     2581 taactatttt cgatattgaa ttcataaatt tcgaataata gattctaata tgttctaatt
     2641 tgtccattgt aatggtattt tgagtagaat ctaccaaatc aataaaaact acacaactct
     2701 ttattgaatc accagaaaat ctaatttctt gtgaagaaaa atttttcata atatttcaca
     2761 cgaaactaaa taactaataa ttttttacag gagaataaaa aagtaaaaat cagtggctgt
     2821 aagatttttg aaccttattt acaaagctaa agaagttttg aactgaatcg ttatagtatt
     2881 tttgtgcaat ttctatagat ttgttaacgg tttctgtata tccaaataca cagtcattta
     2941 ttcttcgtgt atcatttatt gcattatctg taatattttg gttggtatta ctataaacat
     3001 ctgtatatcc ttgtggataa ataaatttat tccaataaga tttattgtta tacatattat
     3061 ctataaattt ggaaaatact gattgataag tattaagaat attcttttgt aattgtatat
     3121 agttgttaga gattgattgg attgtgtcaa tattttgttg ttgatatttg tttgctgtat
     3181 ctaaactttt ttcaagactg taattctttg tcttctgata ttcattgata gtattagtaa
     3241 tcctatttgt tctttcattg aaattactgt tgcctttgtt aagtttacct gtattttttt
     3301 cattaaattc cggtttattt accgctatag tttcatttct ttttatttct tcttttgtta
     3361 acataattat atttccgcta ctaaggtata taaaggtact taacgatgtc cagtgaatag
     3421 tcatatttgt gtttgtatga tctacttatt tgtataattg gacgctatat atttacaatt
     3481 accataataa ccagtaaaaa ggatgatata agtactgaaa tatgagtaat acaatttatc
     3541 aattcttgtt ttctagtaca ttgattcagg aatttctgta acttataaac tataattaaa
     3601 gataaaaatt agataaaatt atactaaaat atatataaaa tacatattct ttacaaattt
     3661 ttatattacc tgcaatttgg acatatgttt tatcaaaaaa aattgaacat tcattaacga
     3721 tgaacggctt tttagatgag aactttatat ctgtgatagt tcggtataaa gtagaattta
     3781 gttaaatata tcattttgtg acgtaataaa ata
//
LOCUS       DATIAS010000242        15428 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1407143, whole genome shotgun sequence.
ACCESSION   DATIAS010000242 DATIAS010000000
VERSION     DATIAS010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 15428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15428
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407143"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            314..2515
                     /locus_tag="VLA74_04680"
     CDS             314..2515
                     /locus_tag="VLA74_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HSF50038.1"
                     /translation="MAKDPICGMFVEETNDSIQHTVDKKKYYFCSNQCLDEFIQPEIE
                     LKKLKFHVAVSIALTIPIVLFSLPHMFPTQFVNLFPMEIMHNTKYIMLALATPIQFWI
                     GWRFYRGFWDGIKAKASNMDTLIAIGTTAAYLYSAIVSIVPSYFPFESVYFETAAIII
                     TLILIGRLLESRTKEKASHAVRKLLDLQPRMAKVITEDGTEIEIPIEQIQEGQTIIVK
                     PGEKVPTDGVIIDGASSIDESAITGESIPVEKSTGSDVIGATINKNGLLKVKATKVGQ
                     DTVLSQIITLVEEARTGKAQIQKMVDQVAKYFVPAIIIIALGVFVGWYFIGDAGLTYS
                     LLAFVSVMIIACPCALGIATPAALMMGSGKAAENGILFKGGEYLEIAKKVRTILFDKT
                     GTLTTGKPSVTNIIDISGIGKNELLRLAAIAESGSEHPLGQAVVRKAKEEGIIVSNPE
                     SFEAVSGHGLKATYSDHVIIIGNRKLLTENNISSERSDLILKEFEEEGKTAVLVAIDN
                     KLSGIIAIADTIKENAKEAIDLLKSQGMEIIMLTGDNERTAKTIASKLGITKVIAQVI
                     PQQKEEVVAKLRSEGKVVAMVGDGINDAPALARADLGIAIGSGTDVAKETGGIILIKN
                     DLMDVVTALELGRKTVSKIKQNLFWAFVYNTGLIPIAAGALVPFLGLGIFGWLPMLAG
                     LAMAMSSVTVVGNSLLLGRYKPSSFVKKSKTMLHDSKKDNLIEVTDWIRTR"
     gene            complement(2559..2789)
                     /locus_tag="VLA74_04685"
     CDS             complement(2559..2789)
                     /locus_tag="VLA74_04685"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-associated domain-containing
                     protein"
                     /protein_id="HSF50039.1"
                     /translation="MKIEKALFRIVGMYCVSCKPIVEKQLKNEKGIKKIDLDYMTDSV
                     IVEYNSLLISKEEIKEKLEKSGYKFVRKSSYR"
     gene            3104..4051
                     /locus_tag="VLA74_04690"
     CDS             3104..4051
                     /locus_tag="VLA74_04690"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF50040.1"
                     /translation="MAINQGNTKIVYTLLLFVVAGGLLFIHGNINNFDYVYGQDQNII
                     INTTKLADNIYMLQGSGGNILVSVGQDGTFIVDDQFAPLTVKIKDAISKITDKAIEFV
                     INTHWHPDHTGGNENLGEAGAIIVSHDNVRKRLSTEQFSDFFKRSVSPLSEKGLPIIT
                     FSDNMTIYQNGEGIRIIHMDNGHTDGDSVIYFPKSNVIHVGDDFSDKSFPFIDISSGG
                     SIDGLIASLKMISSIINDETKVVSGHTGISNKTKVIDFANMLKEVRNQISQMINEGKS
                     LQDIINAQPTSNYEKIYYDYKSIKPKDFVTHTYQSLTKE"
     gene            complement(4406..4960)
                     /gene="msrA"
                     /locus_tag="VLA74_04695"
     CDS             complement(4406..4960)
                     /gene="msrA"
                     /locus_tag="VLA74_04695"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HSF50041.1"
                     /translation="MNNNENEIATLANGCFWCTEAIFKKIKGVKNILPGYAGGTLKNP
                     SYEQVCTGRSGHAESIQIEFDPNVITFEKILDIFWRTHDPTTLNRQGNDVGTQYRSAI
                     FYHDEKQKQIAEKSKTDLEKENVYKDPIVTEITPFTNFFVAEDYHIDYYEKNKDAPYC
                     TFVINPKIHKLIQNHRNEVKEEYK"
     gene            complement(4953..5342)
                     /locus_tag="VLA74_04700"
     CDS             complement(4953..5342)
                     /locus_tag="VLA74_04700"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HSF50042.1"
                     /translation="MDYNKLNPEEERVILNKATEPPFMGEYDNFYEDGTYICRRCNAR
                     LFSSKSKFNSGCGWPSFDAYFPNAIRHVPDPDGIRTEIECANCGGHLGHEFLGENLTE
                     KNRRECVNSLSIRFIQNDEELPKIKNE"
     gene            5902..6150
                     /locus_tag="VLA74_04705"
     CDS             5902..6150
                     /locus_tag="VLA74_04705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50043.1"
                     /translation="MINNSVKKEKSHSEDKNLSSYKKVIKGKELDQIEELSIKIDLLV
                     ELLSEKGIINKKGYTNNLMMRLHQTSKAKTFEEMDEEI"
     gene            6558..6890
                     /locus_tag="VLA74_04710"
     CDS             6558..6890
                     /locus_tag="VLA74_04710"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSF50044.1"
                     /translation="MNEVNYTQFNNVVLSQDKSLVLFYADWCPYCRSFKPIFESKEDP
                     DNQNYTFYSVKLNEEENPLWDEFNIDSVPTIIAFEKDKMVSRRNAKMGIGLSKSDIDS
                     LLLELKWS"
     gene            7908..8141
                     /locus_tag="VLA74_04715"
     CDS             7908..8141
                     /locus_tag="VLA74_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50045.1"
                     /translation="MSNKKIVLASITVIVAAGLLALSPLMMIGNAQAQMYADRYGYDS
                     NYYQDDRYGYDNHPKKSSDVNSQKIKCLNGNVN"
     gene            8169..8408
                     /locus_tag="VLA74_04720"
     CDS             8169..8408
                     /locus_tag="VLA74_04720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50046.1"
                     /translation="MELEDYLANPANTVPIGADPDVNTIGELYHAIEAADGTDDQVEE
                     DDIRGLLGVALKNPPPGQVLQVINCLLDLGLITED"
     gene            complement(8519..8782)
                     /locus_tag="VLA74_04725"
     CDS             complement(8519..8782)
                     /locus_tag="VLA74_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50047.1"
                     /translation="MKLKTIINIGDPTDIQKGETCHVCQKISFFYVELWENKTSIPRT
                     RICSECIKYLNLKFAKTFESRKFLQEVTKSERLLKEFLRSKPS"
     gene            9202..9906
                     /locus_tag="VLA74_04730"
     CDS             9202..9906
                     /locus_tag="VLA74_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50048.1"
                     /translation="MTRDLLIRGFDDQIHSQLSELAKEKGVSINSIVKDAVDKWLNQQ
                     SDIPKKHYLVIYSDDDSILGLLKTMDRLAKESDLFRCFCGPPSTSSTRLLSRLNWYDG
                     TVMPYCYEGDGTLKQQKHKPSQNNKSIMKYCTRVMENIANHSNKKQICCLDFLINDIA
                     ESSLQQALTIEKAYDNSRIPGLMYCTYKTATLLSSDIKDLVELFEGHDQVFIIKQDDV
                     HKLHITKENVHKLFFN"
     gene            complement(10284..11192)
                     /locus_tag="VLA74_04735"
     CDS             complement(10284..11192)
                     /locus_tag="VLA74_04735"
                     /inference="COORDINATES: protein motif:HMM:NF025330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HSF50049.1"
                     /translation="MDIIYTESIKSWTIGSPMPTPRTEVAGTSIGNNIYVIGGLDSSG
                     RVLNTVEVYNIDNNSWKSVAPLPQPLHHTAASSFNNKIYVVGGYSTSIANWVPSDKLF
                     IYDPLLDKWREGKHMPTARGAMTANFVDGIMYVIGGYGSSKILDINEAYNPLTNDWEF
                     NKTLMPTPRHHAASTVVDDKLFIIGGRIVGLYPIVNSNLNERYDPKEDKWITLESMPF
                     KRSGISSASINGSIYVFGGEDVTKTFNNNEKYDVKSNKWISLEPLPTARHGLAAVSIN
                     DTIFVIGGGPKSGLSVTNVNEIFNVK"
     gene            complement(11630..12232)
                     /locus_tag="VLA74_04740"
     CDS             complement(11630..12232)
                     /locus_tag="VLA74_04740"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50050.1"
                     /translation="MGIRVVGISDVSGFIYSKDDNGLNIPKLMKDMKGKAKLSDLKDH
                     DYILRDSNELFEIDLDIFIPAAMGGVINNKTASKLLENGVKMVVEAANIPTTSDACEY
                     LQKNGVWIIPDFLANAGGVIGSFVEYQGRTEKEAFDLIEYKITKNVKEVLTEAIMKKE
                     NPRKVATEISKQIVYRAMLLRKGAISVAREAYDRRDRISI"
     gene            complement(12217..12831)
                     /locus_tag="VLA74_04745"
     CDS             complement(12217..12831)
                     /locus_tag="VLA74_04745"
                     /inference="COORDINATES: protein motif:HMM:NF014827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HSF50051.1"
                     /translation="MTSVWEELDEWGPEKVLQVYDPDTNMKGVLVIDNTSTGPGKGGI
                     RFAQSVTPLEIFRLARTMTWKCAAAGLPFGGAKGGIIADPNSVNRVSWMKSFAKMIKP
                     YCPSQYIAATDVGTTELDMAVFAHEIGDMRACTGKPSELGGIPHELGTTGYGVSIAVK
                     TSLEMLEELKITQIPKKKQIKVCIQGFGNVGSFTAKFLDQWGLG"
     gene            13227..13403
                     /locus_tag="VLA74_04750"
     CDS             13227..13403
                     /locus_tag="VLA74_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50052.1"
                     /translation="MSSIDNKGENEYNYDESNIVGKSENSEEEEDEEISDRIKKEIMK
                     DKDVIAQQKKKDSK"
     gene            complement(13572..13766)
                     /locus_tag="VLA74_04755"
     CDS             complement(13572..13766)
                     /locus_tag="VLA74_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50053.1"
                     /translation="MSSNLEKAYQCEACDMNFSTEKEQNKHRNEKHSNDNMPSNLEKA
                     YQGEACDVDLSTEEYKSNKK"
     gene            complement(14089..14985)
                     /locus_tag="VLA74_04760"
     CDS             complement(14089..14985)
                     /locus_tag="VLA74_04760"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSF50054.1"
                     /translation="MKKFLEKFNFKKLILNMMRINLLCQVLFSILGIFISIGLINLNI
                     LYGQIDKPISDQNSNELPYKILLQNKTTNYYNDAIGYLVYPSVLNATDNGHKFPAVIM
                     IHEWWGLNDNIKKTANKLSEEGYIVLAVDLYNGKVTNDQDRARDLSGIVRANPEEAIT
                     NLKAAVGFLSSLENVDKSRIASLGWCFGGGQSLQLALNSQQHPLNATIIYYGNLITDK
                     QSLLKIHWPVLGIFGDKDTSIPVEQVNQFKNALDANEIVNEIYIYKDVGHAFANPSNE
                     NYAPKETADAWQKTLDFLNKYL"
BASE COUNT         5352 a         2402 c         2309 g         5365 t
ORIGIN      
        1 aatggacaaa catgctttta caattcaata ctagtccaat tatatttttt tgtgaaactc
       61 tttatacttc aaaaaaaaac aaaaaattca gaaataccta tacttttttg ctaaccctat
      121 cagataatct ccttaggtcg atatcgaaat gatttacgtc catctttcaa tagcactttt
      181 attatcagta catcagtatc ccgtaagtgt gaatgccatt attataaaat agatgtatgt
      241 gttattttct atatatcatg ttttacaaat gtaaagtcta gtacttatac atgtatctgt
      301 ttattactac tgtatggcaa aagatccaat atgtggaatg tttgttgaag aaacaaacga
      361 ttcaattcaa cacacagtag ataaaaaaaa atattatttc tgtagtaatc aatgtttaga
      421 tgaatttatt cagcctgaaa tagaacttaa aaaactcaag tttcatgttg cggtaagtat
      481 agctctaacc attcctatcg ttttattttc actcccccat atgtttccga cacaatttgt
      541 caacctgttt ccaatggaaa ttatgcacaa caccaaatac ataatgctag cacttgctac
      601 accaatacag ttttggatag gctggagatt ttatagagga ttttgggacg ggattaaagc
      661 gaaggcgtca aacatggata cattgatagc tatagggaca actgctgcat atttatacag
      721 tgcaattgtt tcaattgttc catcatattt tccatttgaa tctgtatatt ttgaaacggc
      781 tgcaattata atcacattga tcctaatagg aagactatta gagtcaagaa ccaaagagaa
      841 ggcatctcat gctgtaagaa aattgttaga tttacaacca aggatggcta aagtaataac
      901 agaggacggt acagaaatcg agatcccgat agaacaaatt caagaagggc aaactattat
      961 tgtcaaacca ggagaaaaag tacctacaga tggagtgata atagacggtg catcatctat
     1021 tgatgaatca gcaattacag gtgaaagtat acctgtagag aaatcaacag gaagtgatgt
     1081 aataggagca acaattaaca agaatggatt actaaaagta aaagcaacaa aagttggaca
     1141 agatacagta ctttctcaaa tcattacatt ggtagaagag gcaagaaccg gtaaagctca
     1201 gatacaaaag atggttgatc aggtcgcaaa atactttgtc cccgctatta taataatagc
     1261 tttaggagta ttcgttggat ggtactttat tggtgatgct ggtctgacct attcgttact
     1321 tgcatttgta tctgtaatga ttattgcatg tccttgtgca ttgggtatag ctactccagc
     1381 agctcttatg atgggttctg gcaaggctgc tgaaaatggt atattgttta aagggggaga
     1441 atacttggaa attgcaaaaa aggtaagaac cattctattt gacaagacag gaacattgac
     1501 tactggaaaa ccatctgtga ccaatattat tgacatatcc gggattggta aaaatgaact
     1561 tctcaggttg gcggctattg cagaatcagg gtcagaacat cctttgggtc aggctgtagt
     1621 aagaaaggca aaagaagaag gaattattgt ttcaaatcca gaatcctttg aagcagtatc
     1681 agggcacgga ctcaaagcaa catattctga tcatgtaatt ataataggca acagaaaact
     1741 tttaactgaa aataacatat caagtgaaag aagcgatctc attttaaaag aattcgaaga
     1801 ggaaggaaaa actgctgtac tagttgctat tgataataaa ctatcaggaa ttattgctat
     1861 tgcagacact attaaggaaa atgcaaaaga agctatcgat ctattaaaat ctcaaggaat
     1921 ggaaattata atgcttacag gagacaatga aagaactgca aaaacaattg cttcaaaact
     1981 tggaataaca aaagtaatag ctcaagttat tccacaacag aaagaagaag tagttgccaa
     2041 gctaaggtcc gaaggcaaag ttgttgccat ggttggagat ggtattaacg atgcccctgc
     2101 attggcaaga gcagatttgg gaattgcaat tggttctgga acggatgtag cgaaggaaac
     2161 aggtggaatc atactgataa agaatgattt aatggatgtt gttacagcgt tggaactagg
     2221 aagaaaaaca gtctctaaaa taaaacagaa cttattttgg gcattcgtct ataatacagg
     2281 tttgatccct atcgcagcag gggcattggt tccatttctt gggttaggaa ttttcggatg
     2341 gcttccaatg cttgcaggat tagcaatggc tatgagctct gtaacagtag ttggaaactc
     2401 tttattgctt ggaagataca agccaagctc ttttgttaaa aaatctaaaa ctatgttaca
     2461 tgactctaaa aaggacaatt taatagaagt aactgattgg attcgtacta ggtaaaatac
     2521 aaatataaaa atttttttcc tttttgataa atgattatct atctatatga ggatttcctt
     2581 acaaatttgt atccagattt ttccaatttt tctttaatct cctcctttga tatcaataac
     2641 gaattatatt ccactattac actatccgtc atgtaatcta gatctatttt cttaattcct
     2701 ttttcgttct tgagttgctt ttctactatt ggtttacaac taacgcaata cattccaaca
     2761 attctgaata atgctttttc gatcttcatt ttattgaaat cagataccaa tagaattagt
     2821 taggtaataa aattttttta tgttgatcat ttttgctccc ataccacaat tattatccca
     2881 ccatattcat aataaatcag attaagtatt ataatatgat agaataaact tgatttcttt
     2941 atcgcatcta taaaggaaat gtcatagtaa atccatattt aacatcaaat ttcgattaat
     3001 ttctcccaaa tgagagacgc atctagatag tcaaaacctt ttattgacgg acacagaaat
     3061 aaattaataa atggatctaa aaaattgtaa gagtttatcc ttaatggcta taaatcaagg
     3121 aaatacaaaa attgtataca cattattact atttgttgta gctggtggat tattgttcat
     3181 tcatggtaat atcaataatt tcgattatgt ttatggacaa gaccagaata ttataatcaa
     3241 tacaacgaaa ttggcagata atatctacat gctccaagga tcaggaggaa atattttggt
     3301 ctcagtagga caagatggta ctttcattgt agatgatcaa tttgctcctc ttactgtaaa
     3361 aattaaagat gcaatttcaa agataactga taaagctata gagttcgtaa ttaatacgca
     3421 ttggcatcca gaccatacag gaggaaatga gaatcttgga gaggcaggag caataatagt
     3481 atcacatgat aacgtaagaa aacgtcttag tacagaacaa ttctccgatt tcttcaaacg
     3541 atcggtttca cctttgtctg aaaaaggatt accaattatt acattctcag ataacatgac
     3601 aatctatcaa aatggggagg gaataagaat aatccatatg gataatggtc acacggatgg
     3661 tgactccgta atctattttc caaagagtaa cgtaattcat gttggagatg actttagtga
     3721 caagtcattt ccgttcatag atatatcaag cggtggatca atagacggat tgatcgcttc
     3781 attgaaaatg atatcgtcaa taattaatga tgagactaaa gttgtttctg gacatactgg
     3841 aatatcaaac aagaccaaag ttattgattt tgcaaatatg ttaaaagaag tacgcaacca
     3901 aataagtcaa atgataaatg aaggaaaatc tttacaggat attattaatg cacaacccac
     3961 atccaactat gagaaaatat attatgatta taagtcaata aagccaaaag actttgtgac
     4021 acatacatat cagagtctta caaaagaata aatacgcgat aatatatttc ccttttttga
     4081 atatttatta ttaatatagt atatattcta tttccaagaa atattttatt ttaataagta
     4141 aataattaaa attattaatc tcattttata gcagattgaa aatgacagta tttcatctat
     4201 cgttttttaa tatttccatc aaaaattata ttgtgaattt caaaaaagtt accaaaaaga
     4261 tcgatattag tttacggatc ctaataacat ttcatactcc gaaccttccg aactctatac
     4321 cagagtaaca actttattat tttaacttgt aatattattt catgagtatt catacagcaa
     4381 tatgacaagt cattattggt aacagctact tatattcttc ttttacctca tttctatgat
     4441 tctgaattag tttgtgtatc ttaggattaa taacaaaagt gcaatatgga gcatctttat
     4501 ttttttcata ataatctatg tgataatctt ctgcaacaaa aaaattggta aaaggagtaa
     4561 tttctgtcac aattggatct ttgtaaacat tttccttttc aagatctgtt tttgattttt
     4621 ctgcgatctg tttctgcttt tcatcatgat aaaagattgc ggaacggtac tgagtaccta
     4681 catcgttgcc ttgcctattc aacgtggtag gatcatgtgt acgccagaaa atatctagta
     4741 ttttttcaaa agttataaca ttcggatcaa attctatctg aatggactct gcatggcctg
     4801 acctaccagt gcacacttgc tcataagaag gattttttaa tgttcctcca gcatatccag
     4861 gtagaatatt ttttacacct ttgatttttt taaatatcgc ttctgtacac caaaaacatc
     4921 cgttggcaag tgttgctatt tcattttcat tgttattcat tttttatctt tggcaactcc
     4981 tcgtcatttt ggataaaacg tatggataat gaattgacac attcacgtct gtttttttct
     5041 gtcaaatttt ctccaagaaa ttcatgtcct aagtgccctc cacaatttgc acattctatt
     5101 tctgttctta ttccatcagg atcagggacg tgccttattg catttgggaa atatgcatca
     5161 aagcttggcc aaccacatcc agaattaaac ttgctctttg atgaaaagag acgagcatta
     5221 catcttctac atatataggt tccatcttcg taaaaattgt catactcgcc catgaaagga
     5281 ggttccgttg ctttatttag tatgactctt tcctcttctg ggtttagttt attgtagtcc
     5341 atacaattaa cttcccaaac aaatttttga accttccgat ttcatattgt attttgtagt
     5401 gtaactggta tgatttgcat gatcaaatta ataatagaat aatattataa ttcattaaac
     5461 aaggcgaaat ataacaaaaa ggtcttgttt gtcatactta gattctagaa ttttcgtcgt
     5521 tacaattttc aaaagctcaa atggctatat tatctcttta tatctttatt ttacaaatag
     5581 gattgaacga aactaatgag aaaaaaagaa caagagcaga tgtcttaacc tgtttcgaat
     5641 ttctaatata ttgtaaatca tctacgaatt taaattatta aaatagtatg ttacctaagc
     5701 ataggataat gagtatttga aatgttgtta ccttatctat caatcataag ctgatttttc
     5761 ctataataaa aaagagattc tagaatctcc gatgtatcca agtgaattat accaaattga
     5821 ttatctcaat ttgcaattac tctgatatga tcaacctata aaaagtactt aaatactcta
     5881 aagttatatt gtctatcaaa catgataaat aattctgtaa aaaaagaaaa atcgcattct
     5941 gaggacaaga acttaagtag ctataaaaaa gtgataaaag gaaaagaact tgaccaaata
     6001 gaagaattga gtatcaaaat tgatttgtta gtggaattat tatcagaaaa aggaattata
     6061 aataaaaaag gatataccaa caatttaatg atgcgtttac atcaaacatc caaggcaaaa
     6121 acctttgagg aaatggatga agaaatatag ataagaccag tataaataag taggttattt
     6181 tccttcttta gattaaatct tgtaacgatt cattagccaa gatcaagtaa atccttaatt
     6241 gtttatcaat aaataataaa aataatgtat agattattga ctttgtataa tttaatatag
     6301 tttactataa cttagtttat tttgttattg tatgaataaa ataaatgaaa aaattttaat
     6361 gttatgttat ttaaataaat ataaagcaat tcattattta gtatttatat tattcataaa
     6421 taagaggaaa agaatacagt tatagattat tactgaatta aactttaaat catttatttt
     6481 aataaaacag attttttgta gattaccgta gatacggtat agttacaata atatctctat
     6541 aattttataa ctattttatg aatgaagtaa actacacaca gtttaataat gttgtattgt
     6601 cacaagataa aagcttagta ttattttatg cagattggtg tccttattgt aggagcttta
     6661 aaccaatttt tgaatcaaaa gaagatccag ataatcaaaa ttatacattc tatagtgtga
     6721 aattaaatga ggaagaaaat cctctgtggg atgaatttaa tatagattcg gttcccacta
     6781 taatagcatt tgaaaaagat aaaatggttt ctcgcagaaa cgcgaaaatg ggtattggat
     6841 tatcgaaatc tgacatcgat tcattactcc tagaattaaa atggagttaa ttacaatctc
     6901 attatatttt aaatatagag attttgacct ttaaatatga taaccataaa atctgaaggt
     6961 atcttaatta tactgaatta gaatttggat tatgcgtatt taagggaaaa aatagataaa
     7021 gaacattaca atcttttaaa agaaaagatt tcagaactgg aaaataaaaa atgtattaat
     7081 tattggagtc taaaactcat aggatatatt tatcagaaga ccatttgact cacatttgat
     7141 gatgatacaa tgaaaaaggt cttatattca tacgaaattt gaattagtat aaatgcgatt
     7201 gataatttag ataatcaaca aatgcgtaat ttcctttaat aacactatta tctacatttt
     7261 ttttatcatt attatttcaa tatcataata tatatacata aatatttaac gataaaacat
     7321 tagacacatt ttggcatttt gatgtaaagg gaacatatga atctgcaaat aaaaatttaa
     7381 tggtaagttt gatagagtag aagaaaagga tagtatcatt cggtttctgg tgggctgaaa
     7441 gtaagactta ctagcataat tcctagaata gattcttaat tgctttgaat ctattctttt
     7501 ttgggtaaaa accctacttc ttacagcatc agtcatactt caataattct ttttattttt
     7561 ttttattatt tttattaagt ttttccgtat ggcgtgttgc gtatgagcaa taaatttata
     7621 taaatatttt acattttgct tagattttat ataaatcgtt ataagtggtg acatattacg
     7681 ggctagaatt aaatctgtaa accaaaatag gccacattgg ggttttataa gactgatctt
     7741 atatatttga acctattcga tatagaaatc tcctacccat ttcattttgt acttaaacat
     7801 aattttctaa ttatgttacc gtcgataatt cggaatgata aaatattcca agattagatt
     7861 atgttccttc caactttaga tatattaaaa tcgtaaataa gaatgtaatg agcaataaaa
     7921 agatagttct ggcttctatc acagtgatag tagccgcagg tctattggct ttaagcccat
     7981 taatgatgat aggtaatgca caagcacaaa tgtacgcaga ccggtacggc tatgatagca
     8041 actattacca agatgacaga tacggttatg ataaccatcc aaaaaaaagt tctgatgtaa
     8101 atagccagaa aatcaaatgt ctaaacggta acgttaacta agggggaaca cttccacttc
     8161 ctagagttgt ggaattagaa gattacctag ctaatcctgc taatacagta ccaataggtg
     8221 ctgatccaga tgtaaacact ataggagagt tatatcatgc aatcgaggca gctgatggta
     8281 ctgacgatca agtagaggaa gatgacataa gaggtcttct tggggtcgct ttaaaaaatc
     8341 cacctcctgg tcaagtcctg caggtaatta attgtctact agacctagga ttgataacag
     8401 aggattgata acagaatctc cttaactaac aatccatcct accttttttt atttatccca
     8461 tacacataaa ttaattaatt ttttactcta gcgacttttg gataaatatt tttagtcatc
     8521 atgatggttt tgaccttaga aattctttta gaagtctttc tgacttcgtt acctcttgta
     8581 gaaattttct tgactcgaat gtctttgcaa actttaaatt caagtattta atgcattcac
     8641 tgcatatcct cgtccttgga attgatgttt tattttccca taactctacg tagaagaaag
     8701 agattttttg acatacatga caggtctcac ccttctgaat atcagtaggg tcgccaatat
     8761 tgatgatagt cttcagtttc atttctaatg ttgatgttgt ttattcttac tatcataaaa
     8821 atctagcaac tttctgataa catcgttata ggtttcattc ctttttccct ttatcagaga
     8881 ctggttgaat ggacatgatt ttagaaacta gcctaatgca ataaaaacag aatgacattc
     8941 attattgaat cccattgttc gttagataat ttttttaatg gtaataaaaa agttatcaat
     9001 gagtattatc atgaataaaa aattctttca ccattaatta ttctattact ctagacatat
     9061 ttcattttct tcaattttat tttattgatt tatctgattc ctaaaaatgc catcatcata
     9121 gctttataag gagtttaaat gtagatatca tgatatcaaa ttaacaaaaa tatatataac
     9181 ttgaagatat taaaaataaa catgactcgt gatttactaa tcagaggatt tgacgatcaa
     9241 atccattcac aattatcaga attagctaaa gagaagggtg tatctataaa ttcaattgta
     9301 aaggatgctg ttgacaagtg gcttaatcag caatcagata ttccaaaaaa acattatctt
     9361 gtaatttatt ccgacgatga ttccatacta gggttactaa agactatgga tagacttgca
     9421 aaagagagtg atttatttag atgtttttgt ggtccacctt ccactagttc tactaggctt
     9481 ctatctagat taaattggta cgatggaaca gtaatgccct actgttatga aggcgatgga
     9541 acactcaaac aacaaaagca caaaccaagt caaaataata aaagtattat gaaatattgt
     9601 actagggtta tggaaaatat agcaaatcat tccaataaga aacaaatttg ttgccttgat
     9661 tttcttataa atgatatagc agaatcttca ttacaacaag ccttgacaat cgaaaaagct
     9721 tatgataata gtagaattcc tggacttatg tattgcactt acaagaccgc aactctgcta
     9781 agctcagata taaaagatct tgtagaattg ttcgaaggac atgaccaagt tttcataata
     9841 aaacaagacg atgtccacaa gcttcatatc acaaaggaaa atgtgcataa gcttttcttt
     9901 aattgattct gttaacacta aatcaaaaag ttagctgcat cgataatcta aattttaaat
     9961 agaacctttt tataccaata ccatcattta ttaatacaaa caatagatca atttgtagat
    10021 atttcatgta tcaataatag ttattaaaat gttctatccc ttcctggtac aggaaaaata
    10081 atttgaatca acggcctcaa aaaactgtag aatatgtagt atagtatctt gatgcacatt
    10141 ctgcaagaat atgatttgtc gataaagaac aaaagaatct tatattcaga tagccctgaa
    10201 aaattcacaa ggattgatgg agagttctct aaaaatatct tttcatcact tcctacagct
    10261 aggttctgcc ttaaaaaata gtcctattta acattaaaaa tttcatttac attagtaaca
    10321 ctcaatcccg attttggtcc tcctcctatt acaaatatag tatcgttaat cgacacagca
    10381 gccaatccat ggcgagcagt gggtaatggt tctaaagata tccatttgtt actttttacg
    10441 tcatattttt cattgttgtt aaatgtctta gtaacatctt cgcctccaaa aacgtatata
    10501 ctgccattta ttgaagccga actaattcca cttcttttga aaggcattga ttcaagagtt
    10561 atccatttat cttctttagg atcgtatctt tcatttaaat tggaattaac gataggataa
    10621 agaccaacta ttctcccacc tattataaac aacttgtcat caactactgt cgatgctgca
    10681 tgatgtcttg gagtaggcat taacgtttta ttaaattccc agtcattagt caatggattg
    10741 tatgcttcat ttatatccag tattttagaa gaaccataac caccaataac atacatgatt
    10801 ccatctacaa aatttgcagt cattgcgcct cttgcagtag gcatatgttt accttctctc
    10861 catttgtcta atagtggatc atatataaat aacttgtcac ttggcaccca attggcaata
    10921 cttgtagaat atccaccaac gacatatatt ttgttattaa aactagaagc agcagtatga
    10981 tgtagtggct gtggtaatgg tgctactgac ttccaagaat tattatcaat attataaact
    11041 tcaacagtat ttaacactct acctgatgaa tcaagtccac caataacata aatattattt
    11101 ccaatgctag taccggcaac ttctgttcta ggtgtaggca tgggacttcc aatcgtccaa
    11161 gattttattg attctgtgta tataatgtcc attagcccaa atggagacga gaacaaaata
    11221 caaaacatta aagagaaaag taatgttgtt gataagatat atttcatgat ataataaact
    11281 atattataat aaataagaat acctattaaa acattctaaa ttattataat ggatcaaaaa
    11341 agacatgatt ttagactttt tcattatctc atttcaaatt aatttggaac tggttatctg
    11401 tagtttcatt actataaata gaaaaacaat gcaatgtgtc tagttattca tttataatga
    11461 attatcttga ctattacgga aataacaaat caattttttg attaattcag tagacccaac
    11521 gaaaaacatc gagggattgg tatgagagaa aaacaggaga aaattgatat tattatccat
    11581 cattacagaa tatacgaaat ttagttagct agtatacaac aagcaatcgt tatattgata
    11641 tcctgtccct tctgtcataa gcttcacgtg ctacacttat tgcacctttt ctcaacagca
    11701 tggctctgta tactatttgt tttgatattt ctgtagctac tttccttgga ttctcttttt
    11761 tcataattgc ctctgtgagt acttctttta catttttggt tattttgtat tcgataagat
    11821 caaatgcttc cttttctgtt cttccttgat attctacaaa ggatccaata acaccacctg
    11881 cattggctag gaaatcaggt ataatccaaa ctccattctt ctgtaaatat tcacatgcat
    11941 cagatgtagt aggaatattt gctgcttcga caaccatttt aacaccattt tcaagtaatt
    12001 ttgatgccgt tttgttattt atgacacccc ccatagctgc aggaataaaa atatctagat
    12061 caatttcaaa taattcatta ctatccctta gaatataatc atgatctttt agatctgaaa
    12121 gctttgcttt tcccttcata tccttcatta gtttgggaat attcaaccca ttgtcatctt
    12181 tgctgtaaat aaatcccgaa acatcgctta ttcctactac cctaatcccc attgatcaag
    12241 aaatttggca gtaaaggatc ctacatttcc aaacccttga atgcaaacct taatctgttt
    12301 cttttttggt atttgtgtaa tttttaattc ctctagcatt tcaagggatg tttttactgc
    12361 tatacttact ccatatccag tagttccaag ctcatgcgga ataccaccaa gctcagatgg
    12421 ttttccagta catgcccgca tatcacctat ttcatgggca aaaactgcca tatcaagttc
    12481 tgttgtaccc acatctgttg cggctatata ttgagaagga caataaggtt taatcatttt
    12541 tgcaaacgat ttcatccagg atactctatt tacagaattt gggtcggcaa tgataccacc
    12601 ttttgcacca ccaaaaggaa gtccagctgc agcacatttc catgtcatgg tcctggcaag
    12661 cctaaaaatt tctaatggtg taacactttg agcaaaacgt atacctcctt ttcctggacc
    12721 tgttgaggta ttatcaataa ctaaaacgcc cttcatatta gtatcaggat cataaacctg
    12781 cagaaccttt tcaggccccc attcatccaa ttcttcccat acagatgtca attgaaataa
    12841 taatatcaat cccttagatt attcttacct ttttttgtga aattgcttgt tagatatttc
    12901 atttttgtag gttgtcaatt taataattct ttcaataatc aactcattat gcatatatca
    12961 acagattatt aaactacagt ctgtagcatg atcaacaata ttaagtgaac tataactatt
    13021 tctattaata gtttatttgt atttgtattt ctttttaata caaattgtgt acgaacaata
    13081 atttcatttt actattcggt aacaataaat aaagatttaa gaatctgttt gccttttatc
    13141 attagattat ttattatagt tcctcagaat atttatataa gaatcaacaa aaaaaaataa
    13201 aagtatatta aaatatatat taacaaatgt cctcgattga taacaaaggg gaaaatgaat
    13261 ataattatga tgaatcgaac atagttggaa aatctgaaaa ttcggaagag gaagaagatg
    13321 aggagatatc agatagaata aaaaaagaaa tcatgaaaga taaagatgtt atagcgcaac
    13381 agaaaaaaaa agatagcaaa taattttatt actaatttac cattgttttt tttgctgtct
    13441 taatagttag ctcgaattcc ttgtcaatat taattcccaa atctttttat cctgatattt
    13501 ctattttgat tatttaaatt ttcagatatt aaatctaaaa gaaaaataga aatttggttt
    13561 aacaattaat attatttttt gtttgactta tattcttctg tgctaaggtc cacgtcacag
    13621 gcctcacctt gatatgcttt ttctaaattg gatggcatgt tgtcattaga atgtttctca
    13681 tttctatgtt tattttgttc tttttctgta ctaaaattca tgtcacaggc ctcacattga
    13741 tatgcttttt ctaaattcga tgacatgtga tataatagtc aacatatgat ttaacaatta
    13801 ttactgtaat agtcatgtta aagtcataca aatatctaca ttttttatcc gaaagaattt
    13861 gtaattgaat ttttgatcgt caatatatta catttacact tgatacattt catttcattg
    13921 agaaattaga atgtattgct atgtgtaaac tataattata ataataattt atattaatta
    13981 attcagtttt gtgaatacta ttcagaaaaa attcacaata ttatctacga tcctatttat
    14041 tatattatta tggtcctttt atagagtcat aattcaaaaa aattaactct atagatattt
    14101 gttcaagaaa tctagtgttt tttgccaggc atctgctgtt tccttgggtg cataattttc
    14161 attagacgga tttgcaaaag catgtccaac atctttgtag atataaattt cgtttacaat
    14221 ttcgttagca tctaatgcat ttttgaattg atttacctgc tcaacaggaa tagaagtatc
    14281 cttatcaccg aatattccca agactggcca atggatcttt aacagtgatt gtttatcagt
    14341 tatcaaatta ccataataaa taattgttgc atttaatgga tgttgttgac tgtttaatgc
    14401 taattgtaag gactgacctc ctccaaaaca ccaaccgaga gatgcaattc ttgatttgtc
    14461 cacgttttcg agtgagctaa gaaaccccac tgctgcttta agattagtga ttgcttcttc
    14521 tggattagct ctcacgatac cggataaatc tctcgcacga tcttgatcat ttgttacctt
    14581 tccattataa agatctactg caagcactat atatccttct tcagatagct tatttgctgt
    14641 ttttttaata ttatcattta atccccacca ttcatgaatc attattacag ccgggaattt
    14701 atgtccattg tctgttgcat ttaaaactga gggatatact aaatagccta tagcatcatt
    14761 atagtagttt gttgtcttat tttgtaataa tattttgtat ggcaattcgt tggaattttg
    14821 atctgatatg ggtttatcaa tttggccata cagtatattt aaattaatta atccaatgga
    14881 aatgaaaatt cctaaaatcg aaaataaaac ttgacataat aaatttattc tcatcatatt
    14941 taatatcaat ttcttaaagt taaacttttc taaaaatttt ttcaatttct ccctaagttg
    15001 gatccattct tctgggtata acctttaatg tattcttgtt tgagcagatt cttgtaaata
    15061 tgataaagct tgtttgttag cttttgtact caagtgtata taatttttta atttaatata
    15121 tgaatttctt tttattatcg gaacaaattt tctaatttag aggaagttat taaaagaaat
    15181 tccaaaattt atccatcaca ttcttttcag gactataata ataatagttt gtagtatata
    15241 ctttgaatct aacttgtgga ctgttaactt tagcataaac tagtgaaacc gtactgattt
    15301 ttgaaagttt ttttaaatgt attactaaat gtttcttaaa atagtcatcg atttatgata
    15361 tttatatcct aagttactgt tctgaatccg tttcaatatt tcctttattt tatagtctta
    15421 ttatgaat
//
LOCUS       DATIAS010000243         2650 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_43471, whole genome shotgun sequence.
ACCESSION   DATIAS010000243 DATIAS010000000
VERSION     DATIAS010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2650
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43471"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VLA74_04765"
     CDS             complement(<1..471)
                     /locus_tag="VLA74_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50055.1"
                     /translation="MGKKNNISNNRIFNRLPANFYKKYRETILMNKDLLIAGTIGFLA
                     SALIAELYAIYSPNNVLTSTVTVLVGFIIYKVIFIILFHIDNKQKYTDKFTSQINFNI
                     LKKIIKKMVFAWSIFDIVNNLSRWIILFELLLTGFRPFEAAIISSIAASSISYLA"
     gene            785..1594
                     /locus_tag="VLA74_04770"
     CDS             785..1594
                     /locus_tag="VLA74_04770"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HSF50056.1"
                     /translation="MIPWFFDLNPITQALLATFFTWFVTAVGASLVFLLKDMNRKIFD
                     GMLGFAAGVMLAASYWSLLSPALELSKHDMMPWLPVAIGFLLGGIFIRIIDKILPHLH
                     PNLPPVALEGPKTKLKKSNLLVLAITIHNIPEGLAIGVAFGAASLGLPEATLGAAISL
                     AIGIGLQNFPEGLAVAMPLKQEGYSTRKSFFYGQLSASVEPVAGVLGAIFVFMAQPLL
                     PYALSFAAGAMIFVVAEEVIPESHRRGNIDLATFFLLFGFVLMMILDVSLT"
     gene            1992..2201
                     /locus_tag="VLA74_04775"
     CDS             1992..2201
                     /locus_tag="VLA74_04775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50057.1"
                     /translation="MYKTGDTKTLKKNKKSTIQARGKDILYVNTQLIVNKEAIIMYKS
                     THNKKRRRHSYTFYNNEYPIISGFS"
BASE COUNT          910 a          374 c          397 g          969 t
ORIGIN      
        1 tgctaaatag gatatagaag aagcagctat agaagatatt atagctgctt caaaaggtct
       61 gaatcctgtt aataataatt caaatagtat tatccatcgt gataaattgt taacaatgtc
      121 aaatatagac caagcaaata ccatcttctt tattattttc tttagaatat tgaaattaat
      181 ctggctagta aatttatcgg tgtatttttg tttgttgtca atatgaaaaa gaattataaa
      241 aattaccttg tatattataa atccaaccaa taccgttact gtggaagtta atacattatt
      301 aggagaataa atcgcatata gttctgctat aagagcacta gctaaaaatc caattgtgcc
      361 agcaataagt aaatctttat tcattaaaat agtttctcta tatttcttgt aaaaattagc
      421 aggaagtcta ttgaaaattc tattattact tatattattt tttttaccca aataacaatt
      481 atataaatac acacacctct ttatgtcttt aaagagcaga tttacctata tgagaagata
      541 aatatcaaat gattcaagtt atcagatata ctgtatcaca attatattga tgattacgat
      601 ttttagtcaa gaaaaaaact tttcacaagt taattgtatt gagatattgt aaaattttta
      661 cggacaagag aaaaaaggaa acagaaattg tcttaaatta ataaagccga atttagtatt
      721 gaagctcaca taattacaga tagaaatttt aaaataatag atcaagtttt cactaggttt
      781 tatattgata ccgtggtttt ttgatttaaa tcctattaca caggcattac ttgctacttt
      841 ttttacatgg tttgttaccg ccgttggagc ttctttagta ttcttgctca aagacatgaa
      901 tagaaaaatt tttgatggaa tgttaggatt tgctgcagga gttatgcttg ctgctagcta
      961 ttggtctctt ctttctccag cattagaact ttcaaagcac gatatgatgc catggttacc
     1021 agttgcaatt ggttttctat tggggggtat atttattaga ataatagata aaattttacc
     1081 gcaccttcat ccaaatctac ctcctgtagc cttagaaggt cctaaaacaa agttaaagaa
     1141 aagtaatcta ctagtcctag ctattactat acacaatatt cctgagggat tagctattgg
     1201 tgttgcattt ggtgctgcat cattgggttt acccgaagca actctaggag ctgcaatttc
     1261 tcttgccatc ggtataggtt tacaaaactt tcctgaaggc cttgctgtag ctatgccact
     1321 aaaacaagaa ggatattcga cgagaaaaag ttttttttat ggccagttat cagcttcagt
     1381 tgaaccagtt gcaggtgttt taggggcaat ctttgttttt atggctcaac cacttttacc
     1441 ctatgccttg agttttgctg caggtgctat gatattcgtt gttgccgaag aagtaattcc
     1501 agaatcccat agacgtggta atatagattt agcaaccttt tttctgttat ttggatttgt
     1561 attaatgatg atcctcgatg tatctttaac ttgattgttg catgtagaaa gattatcatc
     1621 gtttgctaat gaattctttc aggtactttg cccctcatat tcactttaag agtaggggtt
     1681 ttctattatt cttttaaagt tttaataaat taataacatt ttataaactc tagtattttt
     1741 tctgtattca gtcttttatg atttgtcaat tagaaataat ttttttaatt gtctatttat
     1801 ttatatattt tggatagtaa ttataaggct atactagtgt tattttcttt taaaatttga
     1861 tatgatttca tcatagtcta actctcttga aagtacaaca gtattgggct ttagtcactt
     1921 attgaatatt tttcttgtaa aatgtgcttt catatcaatg tatgtttttc tgattttaaa
     1981 gtctccatag attgtacaaa acaggagata ccaagaccct aaagaagaac aagaagagta
     2041 ctattcaggc aagaggaaaa gacattctgt atgtaaatac acaactgatc gtcaacaaag
     2101 aagctatcat aatgtataag tcaactcaca acaagaaaag aagacgacat tcctatactt
     2161 tttacaacaa tgaatatcca attatatcag gtttttcata atacgtaatg aattgtgtct
     2221 cagcataaac ctatattaca tcatctataa aaataaatgg tgatctattt taattagttg
     2281 agaagtttta tctgtcacaa tgagtttgcc agattttctt tttggaaacc agataatgta
     2341 gcttaatacg ctaggacaga tttctattta tcttaacaat cttattgaaa gcataataat
     2401 tcttttcaat ttaattctca aaaaataatt taaaaattca aaggttttgt tatggactct
     2461 aaaaatatat gtaatttaga aattaaaatc gtaaaaaata gtttataaag atataggacc
     2521 aaaacctata tatcattaaa gcttaaaaat aaaaaatgaa tgaatcatta gaaaataata
     2581 tcattaaagg aagtgaatat gattcatttg aacttagttc tcctgattta gcagttattt
     2641 tatgtacaaa
//
LOCUS       DATIAS010000244         2224 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1815634, whole genome shotgun sequence.
ACCESSION   DATIAS010000244 DATIAS010000000
VERSION     DATIAS010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1815634"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(289..474)
                     /locus_tag="VLA74_04780"
     CDS             complement(289..474)
                     /locus_tag="VLA74_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50058.1"
                     /translation="MAKFKIHSSLFHNDDDDKSKICPFCCINTSIDDIDILEFFHSHC
                     WIEFRKKGIPDKIPDNI"
     gene            complement(658..1080)
                     /locus_tag="VLA74_04785"
     CDS             complement(658..1080)
                     /locus_tag="VLA74_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50059.1"
                     /translation="MESPNRIKFHTNEKYKKQIVSLKYCLSRIYYKTKRRKTCKIEYY
                     NYSKYSYVQLREYLFFFLIEISLVAGISAILLGDSDGIGVGQQITYAQLTTSPNGYPE
                     DHPLAPPQGYPDGYSERPSHPQVPPYFPQAQSHPQVPR"
     gene            complement(1497..1823)
                     /locus_tag="VLA74_04790"
     CDS             complement(1497..1823)
                     /locus_tag="VLA74_04790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50060.1"
                     /translation="MILFSKEYHEFSIKIFGTYLHHSPNTKNSSISNDSVIKFYEEYT
                     KYFGMLHPIWHYNIKEEELKKEFITDRKESNSSSCNNREKKKEISTTKTLRFIKYYHY
                     QIISKK"
     gene            complement(1891..>2224)
                     /locus_tag="VLA74_04795"
     CDS             complement(1891..>2224)
                     /locus_tag="VLA74_04795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50061.1"
                     /translation="YISEERNMLIAEKFIRSLVEKYGKHTVYTDGGTWYDQACNVLRL
                     KHYLHSPLKKSLMERVNQYFKDRIKVLMTIIHVCKKVNSTYYIYITGYNSLSLCITIQ
                     QIIIMILD"
BASE COUNT          778 a          304 c          293 g          849 t
ORIGIN      
        1 ggataatgct aaatgactta gaatacaacc aaattcaaaa tggaaggttg tcaacgaaat
       61 tgactacatc ttagtgaatc tgtataccaa ataatcaaat ttgttaaata tcaacttaat
      121 ataatagtca gcatttataa ataaaaagca ccatctcagg ttgaccagtt tctctttata
      181 atcacctaaa ggttaaacat gaaaagggaa gtcactggag gagtttgaat tgtaatatta
      241 tagaattgaa agatagtaaa ggtaaaaatc ttcatgtttt ttatactatt atatattatc
      301 tggaatctta tcaggtattc ctttttttct aaactcaatc caacaatgac tatgaaagaa
      361 ttctaaaata tctatatcat ctattgaagt attaatacaa cagaatggac aaatttttga
      421 tttatcatcg tcatcattat gaaataatga tgaatgaatc ttaaactttg ccatgtttta
      481 attgaactat tataggatta aaaggaagtt aaattaaaac aatattacaa gaaaagattt
      541 tatttctaat atgattcaat tttactttta taacttatag caattaaagt tgatgtatca
      601 tctctttatc tattttgtac tagagttcta cgaatatcat attgtatgat gggattatta
      661 acgtggtact tgtgggtgag attgtgcttg agggaagtaa ggcggtactt gtgggtgaga
      721 cggtctttct gagtatccat caggatatcc ttgaggtggt gctagtggat gatcttctgg
      781 gtatccatta ggagatgtag ttaattgagc atatgtaatt tgttgaccaa caccaatacc
      841 atcactatct ccaagtaaaa tagcagaaat acctgcaacc aatgatatct ctatcaagaa
      901 gaaaaaaaga tattctctta attgtacata actatatttg ctataattat aatattcaat
      961 tttacatgtt tttctccttt tggttttata atatattcta gataaacaat attttaatga
     1021 cactatttgc tttttgtatt tttcgttcgt gtggaactta atcctattag gactctccat
     1081 accttttatt gtttaagaat taaaaataag gattgatagg aaatccttct acttatagat
     1141 aaaacaccta attaaattaa aaaattatta atattaaatt ctgttagata ttgactgaaa
     1201 tcacaattat tcaactatgg acgagataat tgcataagta ctacttgttg actacaagaa
     1261 ttttgaaata tcaaaggtaa tagaaaatgt agaaataata taaatatact aaattaattg
     1321 tcttaatttc ttaattataa taatttgttg tacttatcat ccacaaccac cacacccacc
     1381 acaacctcca tcacaattat gacaacaact agaacaaata cttccaaaat tacctatatt
     1441 attgagaata gaagatttgt ctacaacaat atcataattt ggaatattat atttagttac
     1501 ttttttgata ttatctgata gtgataatac ttgataaatc ttaaggtctt tgtagttgat
     1561 atttccttct ttttttctct attattacat gatgaagaat tactttcctt tctgtctgtg
     1621 atgaattctt tttttaattc ctcttctttg atattataat gccatattgg atgtaacatt
     1681 ccaaaatatt ttgtatattc ttcataaaat tttattactg aatcatttga aatacttgaa
     1741 ttttttgtat taggtgaatg atgaagatat gttccaaata tttttataga aaattcatga
     1801 tattctttgg aaaataatat caatgtgtgc cataattcat ctataatgtt attagtcagc
     1861 tctgttaatt taagataata ttcacctcct ttaatccaaa atcattatta ttatttgttg
     1921 tattgttata catagagaca aagaattgta tccagttatg tatatgtaat aagttgaatt
     1981 cacctttttg catacatgga taatagtcat caaaacttta attctatctt taaaatattg
     2041 gttgactctt tccatcaaac tcttttttaa tggtgaatgt agatagtgtt tcaatctcaa
     2101 gacattgcat gcttgatcat accatgtacc tccatctgtg taaactgtat gttttccata
     2161 tttttcaaca agagatctaa taaatttctc agcaataagc atatttctct cttctgagat
     2221 gtat
//
LOCUS       DATIAS010000245         3481 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1952320, whole genome shotgun sequence.
ACCESSION   DATIAS010000245 DATIAS010000000
VERSION     DATIAS010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3481
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1952320"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VLA74_04800"
     CDS             <1..282
                     /locus_tag="VLA74_04800"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50062.1"
                     /translation="LDNASIHRSKKVREIIQKHHHRISFVFLPTRSPELNLIEVRWLW
                     MQRQAINNSTFRNESDTGKAVSDWTYTYNEKHGIRITDVLQIGVMNMTT"
     gene            376..573
                     /locus_tag="VLA74_04805"
     CDS             376..573
                     /locus_tag="VLA74_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50063.1"
                     /translation="MYSLYLYFLGLSLRNTSKALTIFKDQKRGYVSIWNWIQRFGSCQ
                     IYKRKRVTAFIIDETIIHIGS"
     gene            649..867
                     /locus_tag="VLA74_04810"
     CDS             649..867
                     /locus_tag="VLA74_04810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50064.1"
                     /translation="MLVAERFIQSLIEKYGRHTVYTDGGTWYDEACNIIGLKHYLHSP
                     LEKSLMERVNQYFKDRIESSLMITILAT"
     gene            complement(1600..3363)
                     /locus_tag="VLA74_04815"
     CDS             complement(1600..3363)
                     /locus_tag="VLA74_04815"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSF50065.1"
                     /translation="MSWATKQYKENDNHKSKNSSDVRESEFYNSIINRTLRRYFNEFR
                     DRYQREIVTVIYKHPDDMFDSHSYRKGAFFLHMLRNKIKEENFKKCLHAYLLQYRHKA
                     VETDDFRKKCEEVIGQDLRAFFNQWLHRDGHPILNIALSVKEFRQHIFKLNFIVEQTQ
                     NQNIEQEKKLQPFIFPLEIKLYYIDSYNKKQEIIKTIDIEEIKKNYEIDLNDINVKQI
                     RFVSIDPELKLLKQIKDINLINETNNFNLLNMLLEQLLFGDTIVERLDANTFLRKYAA
                     NYINDKPIIELICNTLKKSILSDPFYSVSASSALTLGSLYNENTQDINQICYKTLSYF
                     FTESYLKKYFFELDPRIKKDLVNAIGTFKRESSIKPLKQIFNRENSPFVKYEIIIAIA
                     KSIPTANLEIIEKYIKELENLGNLPSFRHHNTRGTIAGLVEITKSIPNEREIFKNISN
                     YIIDKSKSNNPYDVRADAITFLGELIRFENGEINEQVFCQLIMLLNEPRFGLQQNACK
                     SLVSKRAKPFLHPDKNDKTKKIFQPDEYVKETIKQLTRVAENDLDGWVRRDAETSLNK
                     IKDWFIEWTDAKLDLKVNLRK"
BASE COUNT         1182 a          498 c          454 g         1347 t
ORIGIN      
        1 ctggataatg catcaataca cagatccaag aaggtacgag agataataca gaaacaccat
       61 cacagaataa gctttgtatt cttgccaact agatcaccag aactaaatct tatagaagta
      121 agatggttat ggatgcagag acaggctata aacaattcca catttagaaa tgaatcagat
      181 actggaaaag cagtctctga ctggacatac acctacaatg agaaacatgg tataaggata
      241 actgatgtct tacagatagg agtaatgaat atgactacat aactgttaac gatctagatt
      301 tagctgtgaa cattctattt ctaatctagt atgcaaatta gatttgagag aaatagaata
      361 tccacaattg taataatgta ttctttgtat ttgtactttc ttggtttgag tttaagaaat
      421 acatccaagg cactaacaat ttttaaggat cagaaaagag gctatgtatc tatatggaat
      481 tggattcaaa gatttggatc ttgtcagatc tataaaagaa aaagagtaac agccttcata
      541 atagatgaaa ctattataca tattggtagc taacgctttt ggttgtggtt ttgtattgaa
      601 ccaatacaca gttctgtgct tggaatatac aattcctaag aaagaaatat gcttgttgct
      661 gagagattca ttcaatcatt aattgaaaaa tatggaagac atacagttta cactgatggt
      721 ggtacttggt atgatgaagc atgcaatata attggactca agcattatct gcattcacca
      781 ttagagaaaa gcttgatgga aagagttaat caatatttca aagatagaat tgaatcttct
      841 ttgatgatta ctatccttgc tacataagaa ggaaaagaga agaatgtaat ctaaatcatg
      901 tgtataattg gatagaacta tttgtatcaa tgtacaatag atcttttgcg ttattaagaa
      961 ggaatcaaaa tattctgaaa atataactaa tttttataaa ttttataaat ttaataacat
     1021 tattctcttt tatcttagat caaatgtgta atattttaaa tggttgctaa ttacgcaata
     1081 gatctaataa tactatagtt acaaagaata atcctctgtt ctaataataa aggaggtatt
     1141 aatcccttaa gttaacagga ccctaatatt tactaataat ttctcttaat cttcaaattg
     1201 ttatgctatt ctattttact tgaaaccaaa aaattatagt aagtgttcat actttatcaa
     1261 aaggccctgt taacttaagg ataaagtaat aggtatgttc tacttttata ttatgttctg
     1321 tgctccattt cagaagaatt ttataattta tttcataaat tttccttaac ttaacagagc
     1381 catcaaagag ttcaaattcc aaacatttag ttgaataata gcactgaatc catttgaaat
     1441 tatttgatcc catgcacatc ttttctttaa ttttttaatt aaataacata tagtttttat
     1501 tatttccttt agtaaagaca tttattataa taaaatatgt cattgcatat gattattact
     1561 gtatctagta aaagtatttc atataattta cctataatat cattttctta aatttacttt
     1621 taaatctaac tttgcatctg tccattcaat aaaccaatct ttgattttat tcaaacttgt
     1681 ttctgcatct cttctcaccc agccatccag atcattttct gcaactcgtg ttagttgttt
     1741 tatcgtttct ttgacatatt catcaggttg aaatattttt ttagtcttat cattcttatc
     1801 tggatgaaga aaaggtttag ctcttttgct tacaagagac ttacaagcat tttgttgtaa
     1861 tccaaatctt ggttcattca ataacattat tagttgacaa aaaacttgct catttatctc
     1921 tccattttca aatctaatta attctcctag aaaagtaatt gcatctgctc tgacatcata
     1981 tggattatta gacttgcttt tatctataat gtaatttgaa atgtttttga atatttctct
     2041 ttcgttagga atactttttg taatttcaac caacccagca attgttcctc tcgtattgtg
     2101 atgcctaaat gaaggtaaat taccgagatt ctctaattct tttatgtatt tctcaattat
     2161 ttctaaattt gctgtaggta tacttttagc tattgctata attatttcat atttaacaaa
     2221 aggactattt tctctattaa atatttgttt caaaggttta atagatgatt ctcttttaaa
     2281 agtacctata gcattaacta aatctttttt tattcttggg tccagctcaa aaaaatattt
     2341 cttaagatag ctttcagtaa agaaataact aagtgtcttg taacatattt gattaatatc
     2401 ttgggtattc tcattatata atgatcctaa agttagtgct gaacttgctg aaacactata
     2461 aaatggatca gataaaatag acttctttaa tgtattacaa atcaattcaa ttattggttt
     2521 atcattaata taatttgcag catactttct aaggaaagtg ttagcatcaa gcctttcaac
     2581 aattgtatct ccaaataaaa gctgctctaa aagcatattt aataaattga aattattagt
     2641 ttcattaatt aaattgatat cctttatttg ttttaataac ttaagttctg gatcaataga
     2701 gacaaatctt atttgtttta catttatatc gtttagatct atttcataat ttttcttaat
     2761 ctcctcgatg tcaattgtct taattatttc ttgtttttta ttataggaat ctatgtaata
     2821 tagttttatt tctaatggaa aaataaaagg ctgcaatttt ttttcttgtt caatattctg
     2881 attttgagtt tgttcaacta tgaaatttaa tttaaatata tgttgccgaa attctttaac
     2941 tgaaagagca atattaagta taggatgccc atcacgatgt aaccattgat taaagaaagc
     3001 tctcaaatcc tgtcctataa cttcttcaca tttttttcta aaatcatcag tttctactgc
     3061 tttatgacga tattgcaaaa gatatgcatg taagcatttt ttaaaatttt cttcttttat
     3121 tttatttctt agcatatgta aaaaaaaggc tcccttcctg tatgaatggc tatcgaacat
     3181 atcatctgga tgtttataaa taacagttac aatttctctt tgatatcgat ctctaaattc
     3241 attaaaatat ctccttaatg ttctgttaat tatagaatta taaaactcac tttctcggac
     3301 atcagaagaa ttttttgatt tgtgattatc attttcctta tactgctttg ttgcccaact
     3361 catttgaata atatttttta ttctaatagt atatagtcat ttgatagtta tagtttgaaa
     3421 ccagttatac aacgatgctt ttaatatcat ttcctttatc atgttatcaa atctgatagc
     3481 a
//
LOCUS       DATIAS010000246         2788 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_998638, whole genome shotgun sequence.
ACCESSION   DATIAS010000246 DATIAS010000000
VERSION     DATIAS010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998638"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(380..865)
                     /gene="tmk"
                     /locus_tag="VLA74_04820"
     CDS             complement(380..865)
                     /gene="tmk"
                     /locus_tag="VLA74_04820"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HSF50066.1"
                     /translation="MTLLFLNKGRLIVLEGMDKAGKGTQCKLLNEYLNKNGKKSQILD
                     FPDYTTTLGKEIRKFLNGKNNFPLEVQHMLLSANRWEKKETILNILNAGTTIIMDRYY
                     QSNLVYGLSNGLDLDWLANLDKGLPKEDLVIILEISSNTSNKRVINHRDIFEKNNNLL
                     I"
     gene            1021..1485
                     /locus_tag="VLA74_04825"
     CDS             1021..1485
                     /locus_tag="VLA74_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50067.1"
                     /translation="MAVFHLWKRKIEFCSVCKTQLKHKYKPSKDWKIQGFLCGDCHTL
                     KTKEFVIKQQEEKERQEKEANRCSICGLDIGIDSKKFKPRWQWNMNNESFLCNKCYDN
                     KESEFQKERNYCAICNKALKFFRYHPKPKWNIKGQLCKECWDRRNEMSEYKL"
     gene            1520..1594
                     /locus_tag="VLA74_04830"
     tRNA            1520..1594
                     /locus_tag="VLA74_04830"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1555..1557,aa:Arg,seq:gcg)
     gene            complement(1947..2210)
                     /locus_tag="VLA74_04835"
     CDS             complement(1947..2210)
                     /locus_tag="VLA74_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50068.1"
                     /translation="MSDNIEKRTDLLTPQLLKTPLGQKVTYEFLKSLSRGYPLDDALE
                     KAKAIAQEDGSLLPFQISFILNLLNILGPTVIKFFSDFKNKRN"
BASE COUNT          987 a          406 c          418 g          977 t
ORIGIN      
        1 ataatctatt attcatctag ctaattcctt tgaactttaa tggagtactt ggaaggtcct
       61 accaattcga taatatgaag ctcgaaggag aatatataac atttttagaa ataaaaaaaa
      121 tgtcagaaaa aattcccgtg aatttttaaa aaaaatgcta aatcttcctt ggaggtatta
      181 atagcttctg cagcaaatta aagatctgta ttctacatac aaaattgtat aaacaaaata
      241 gaaaaaagag aatatgttat atatttattt ctcttctcaa taggttacat atgttttgat
      301 gaacgtcttt tatacttcgc tcgccatcaa ttatatacca tccataaatt tgggctaatt
      361 tttgataatt ttttttcact tatattaaaa gattattatt tttttcaaaa atatctctgt
      421 gattaattac tcttttattg gatgtattag aacttatttc taatattata accagatctt
      481 ctttaggtaa acctttatca agattggcca accaatctag atccaatcca ttagagagac
      541 cgtaaacaag atttgattga taataacgat ccataataat tgtagttcct gcattcagaa
      601 tattcaatat tgtttccttt ttttcccacc tatttgcaga taacaacata tgctgaactt
      661 ccaaaggaaa attattcttt ccattcaaaa attttcgtat ttcttttcca agagtagtag
      721 tataatcagg gaaatctaaa atctgacttt ttttaccatt tttatttaga tattcattta
      781 ataatttaca ttgagttcct ttgcctgcct tatccattcc ctctaataca attaatcgac
      841 ccttattcaa aaataataga gtcaatatat gtatttaata tattatcttt atgtatcagg
      901 tgatagagag agagcctcca aaaagaataa ataaattttc tattttggtt tgaaatactt
      961 gtaaatcaca ttgatttata aatataaagc cgaaatacaa tatatataac aacaaggtga
     1021 atggcagttt ttcatttatg gaaaagaaag atcgaatttt gttctgtatg caaaacccag
     1081 ttaaaacaca agtataaacc ttcaaaagat tggaagattc aaggcttttt atgcggtgat
     1141 tgtcatacat taaagacaaa ggagtttgtt ataaaacagc aggaggaaaa agagagacag
     1201 gaaaaagaag caaatagatg ttcaatttgt ggattggaca tagggataga ttccaaaaaa
     1261 ttcaagccta gatggcaatg gaatatgaat aatgaaagct tcttgtgtaa taaatgctat
     1321 gataataaag agagtgaatt tcaaaaagaa agaaattatt gcgcaatatg caacaaagct
     1381 ctaaaattct tcagatacca cccaaagccg aaatggaaca ttaaaggtca actctgtaaa
     1441 gagtgttggg atagaagaaa tgaaatgagt gagtataaat tataaacatt caagtttata
     1501 atattttatt atcagatgtg ggctcatagt tcagtttgga tagaatggct gcctgcggag
     1561 cagttggtcg agggttcaaa tccctctggg cccaatgaat ttgttattta atggattagg
     1621 attacaggca aaaatgagcg ttaaacctcc tctatggatg gatgagtttt aacatcaatg
     1681 aataaaaata ataattggac tcaattacta gtcaataatg aacacttaaa ctgtctctat
     1741 tcaactccct gatggttctc atatacgtgg gatagatata cgaaatttca aatggataca
     1801 aatccgtttt tgatagatcc aatgttttaa tccttttact cttatgggat gtatttattt
     1861 ttcagatatc ttattgcaat aagtttttat ttaatgctca tgtttgtcct taatccaatt
     1921 tttaatgtcc gatataagta aaataatcag tttcttttat ttttaaaatc actaaaaaat
     1981 ttgataactg taggacccaa aatatttaat aagtttagaa taaaggagat ttgaaatggt
     2041 aataaggaac cgtcttcctg tgcaattgcc tttgccttct ccaatgcatc atcaagtgga
     2101 tatcctcgcg ataaggattt taggaattca tatgtaacct tttgacccaa tggagttttc
     2161 agtaattgtg gtgtaagtaa atctgtcctt ttctcaatat tatcggacat tgtgtttcta
     2221 taatatgata tttacttata tctgtgttta ctgaaaagag tcttaaaata tccaggtaaa
     2281 gttattaaat taatgatttt actaaaatat ggaactacgt ttgatcaata acgttcccag
     2341 gttctgttcg agatcctcta acctcatcct tacaaaatgt tgacaatcct tctttatgtt
     2401 ataactcagc cgacattgaa tgatcaaatt attcctcata ttccatctaa gctctcgaag
     2461 aacgcttgga caccaactat caggaagaga gatagttaac cccacgtcta gtatatgtat
     2521 tataaagctt taaacttgac tgaaatattt ttcaataaga gcaatttcat ttaacttttc
     2581 acaatagatc ctaattatta tttcgtctaa gtgatttgta acatatactg acacatctta
     2641 agagtcaaat ggagcgtaat ctatctcatc cagtattttt actggcgaaa agataaaaat
     2701 tatagaatct gaaatagttt gaataaattt agttatttga tcattttttt cttgttgtga
     2761 aatagacgtt atgatatagg ataaaatt
//
LOCUS       DATIAS010000247         3665 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1408013, whole genome shotgun sequence.
ACCESSION   DATIAS010000247 DATIAS010000000
VERSION     DATIAS010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3665
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408013"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..133
                     /locus_tag="VLA74_04840"
     CDS             <1..133
                     /locus_tag="VLA74_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HSF50069.1"
                     /translation="RTHSWMNRFRRLLIRWEKKEDNYIAILHFVCAWITYKRGGVFG"
     gene            1168..1290
                     /locus_tag="VLA74_04845"
     CDS             1168..1290
                     /locus_tag="VLA74_04845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50070.1"
                     /translation="MVVNGTQNVVQAVKSGSVMLDGDIKDESFVSLFDLLILYK"
     gene            complement(1367..2383)
                     /locus_tag="VLA74_04850"
     CDS             complement(1367..2383)
                     /locus_tag="VLA74_04850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50071.1"
                     /translation="MLISIFGIIFSNLDIPTVDAKKFSKIKSKNSKSDFKKSKSKISK
                     SDFKKYDNNIKKDKKFKPSSISQGSSLTSFKPVNIKNLDKDKLRNLGDKDKFDKFPGV
                     SQLPHFPECGKQGTCIDGGGINIEDEINIDVDNVDVDWDDIDWDNIDDDIDVDIDDDI
                     DVDIDDEDVDIVVRDDDDDDDDDDDDDDDENNTYIYNYGYPEETYQESYVNEYDENYI
                     QQDTSPEQSYVTSEVQRIVTEGSFKIHLVESGNPLTAVDNTGYVLLGSNQGTNNELEI
                     SNGSNGQIIILTGADDTRPVKISSTENIKLELNEIILGKNDALILAYLDESSSWFQIA
                     SKIV"
     gene            2765..>3665
                     /locus_tag="VLA74_04855"
     CDS             2765..>3665
                     /locus_tag="VLA74_04855"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl/aryl-sulfatase"
                     /protein_id="HSF50072.1"
                     /translation="MIQIKSFVVQCVLFLNFVIIFSLCLFFLYPQLSFSETVNTKNQS
                     SIESIPFTFIGIEGNKTVNPVLLEQSKDFSPARVIEVTPGVYTAIGYGPSNIIMVEGT
                     DGVIMIDSGSSVEQAQIILSEFRKITDKPISALIYTNGKADHVGGGGVFVNDSKTQGQ
                     LPDIIANIEFAENVFPSIGQIAKQKSIYDLYWSGLLLPSDNENDSSISSGLGPNWKLG
                     NISYISPNILFNDTLETTYSGINITLISAPGPSPEQIFVWIPEKEVLLSSDLVYESFP
                     NLYSMSGLEDVDIQSWIDAIDTMR"
BASE COUNT         1221 a          576 c          552 g         1316 t
ORIGIN      
        1 aagaacacat tcatggatga atcgattcag acgattattg attagatggg aaaagaagga
       61 agataattat attgcaatac tacattttgt atgtgcttgg ataacatata agagaggagg
      121 agttttcgga taggctctaa gttaaggaaa atttatgaaa taaattataa aattcttctg
      181 aaattgagca cagaacataa tataaaagta gaacatacct attactttat ccttaagtta
      241 acagggcctt gtaataacat agatcatcaa catggagatc aaaatccacg tgaatgtttc
      301 gacggaagaa aattccatta ttctatttat caaaaatgca ttaaatcttt ctatgacaat
      361 ttagcaatta tagaaaaaga cttagccaaa tatcagttct aataacccaa gtgtacaagc
      421 tcaaatagat attctaggtt ttacattggg atgatactca aagttcaaaa ataaatataa
      481 ttaagcgttt tcttttagtt ttttatcttc tattttctct actttctttt cttttttacc
      541 aaacaattta ctgaatatgt tacaaaacat gttattatat atatagaaag aatatttaag
      601 tttgatatag aagattgtaa agttagccaa tcaccattcg aatgtcctaa ttgtatttta
      661 gataagtgct gttgttggca aattttcatt aaagttacgg gggtgatact cagaactcca
      721 gtattacccg aacgcttcac aagtacatta taactcgttt ttcatgttct aattgttgta
      781 ataatatagt aggattcaaa aataaaaaat tatgcatttt caactggctt attatcagtt
      841 gtacatcgaa aggagtattt ttgtatttat actatcagtc tatcattaga catagtgaac
      901 ccgagaaaag tacgggcccg tcgggagttg aatagacatt gtttcagtgt tcaatcgata
      961 ttaattgaat attaaatatc caatttatca taataattaa aaaaaagtca tgtcttctaa
     1021 gaagcaaatt caataatggg cttcatgagt tgataggcag tatatcagca ggaacttatg
     1081 aaagagatgg tatattgaaa tgttcccatt cgtcctaaaa ctgtctttct agaataaaca
     1141 agatgacttg attctgatat atacaaattg gtagtcaatg gaactcaaaa tgttgtacaa
     1201 gcagttaaat ctggaagtgt aatgttagat ggcgatataa aggatgaaag tttcgtttca
     1261 ttatttgatc ttctaatact atataaatga actacaaaat atggataaag tacaaaaacg
     1321 ataatttaaa aaaattacta caccatttct atttttttat atcattctat acaattttag
     1381 atgctatctg aaaccatgaa gatgattcat cgaggtacgc aaggattaat gcatcgtttt
     1441 tacccagtat tatttcattt agctcgagtt ttatattttc agtacttgat atctttacag
     1501 gtcttgtatc atcagcccca gtaagtataa taatttgacc attagaacca tttgatattt
     1561 caagttcatt atttgttcct tgattagacc ctaaaagaac atatccagta ttgtctactg
     1621 cagtcaaagg gtttccagat tccactaaat gaattttaaa tgacccttca gtaactattc
     1681 tctgaacctc tgatgtaaca taagattgtt caggacttgt atcttgttga atataatttt
     1741 catcatattc gtttacatat gattcttgat aagtttcttc tggatatcca taattataga
     1801 tatatgtatt attttcatcg tcatcatcgt catcatcgtc atcatcgtca tcatcgtcat
     1861 ctctaactac tatatctaca tcctcatcat caatgtcaac atcaatatca tcatcaatgt
     1921 caacatcaat atcatcatca atattatccc agtctatatc atcccagtct acatctacat
     1981 tgtctacatc aatattaatt tcatcttcta tgttgatccc acctccgtct atacatgttc
     2041 cttgttttcc gcattcagga aaatgtggta attgtgaaac tcccggaaat ttatcgaatt
     2101 tatccttatc ccccagattc ctaagtttat ccttatccag attcttgata tttacgggct
     2161 tgaaggaagt taaggaagaa ccttgagaaa tactacttgg tttgaacttt ttatcctttt
     2221 ttatattatt atcgtatttc ttaaaatcag acttggatat cttgcttttg gatttcttaa
     2281 aatcagactt gctgttcttt gatttaattt ttgagaattt ttttgcatcg actgtaggaa
     2341 tatcaagatt agaaaaaatt atgccgaaaa tggaaatcag caatatcccg aatatgaaat
     2401 taaacctggt gatcagtgct attctattac ctttaaatgt tatacctttt tttaatcctt
     2461 ttggaaaact ttttttaatt agtatttttt aaagtttatt tatactctct ctgtttcatt
     2521 ttgaatttcc tttctatacc atttagcaca tattttctaa tcaaatcgct gttggaatac
     2581 tttaaagtag tttaacatta ctattattaa acacgatagc aatatttttt ccggcttata
     2641 cgatattata agtaaatctg attagaaaat ataggctaat tgggctacca cgttgggatg
     2701 ttgtgaatat tttacaaaga atttatatta tattataaag atcctgattt tgatcatata
     2761 gtttatgatt caaattaaat catttgtagt tcaatgtgtt ttgttcttaa actttgtaat
     2821 catattttcc ctgtgtttat tctttctgta cccacagctt tctttctcag aaaccgtcaa
     2881 taccaagaat caatcgtcta tagaatcgat tccttttaca ttcattggga ttgaaggcaa
     2941 taaaacagta aatcctgttc tattggaaca gtcaaaagat ttcagcccag caagggtaat
     3001 tgaagttaca cctggagttt atacagctat agggtatggt ccatccaata ttattatggt
     3061 ggaaggaaca gatggtgtga taatgataga tagtggttca tctgtagaac aagcccaaat
     3121 tatcctttct gaatttcgga aaattactga caagcctatt tctgctctta tctatacgaa
     3181 tgggaaagca gatcatgtag gcggaggtgg agtatttgtt aacgatagca agacacaagg
     3241 acaacttcct gatattatag caaatattga atttgctgaa aatgtttttc catctatagg
     3301 acaaattgca aaacagaaat caatttatga tctttattgg agtggattgt tacttccctc
     3361 agataatgaa aatgatagct caataagtag tggacttggg ccaaactgga aattaggaaa
     3421 tatctcctat atctctccaa atatcctgtt caatgataca cttgaaacga catattcagg
     3481 aataaacatt actcttattt cagcaccagg accttcacct gagcagattt ttgtttggat
     3541 accagaaaaa gaagtccttt tatcaagtga tcttgtatat gaatcatttc caaatcttta
     3601 ttccatgtcc ggtttagaag atgttgatat acaatcatgg attgatgcaa ttgatacaat
     3661 gagag
//
LOCUS       DATIAS010000248         5707 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1408071, whole genome shotgun sequence.
ACCESSION   DATIAS010000248 DATIAS010000000
VERSION     DATIAS010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5707
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408071"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VLA74_04860"
     CDS             complement(<1..531)
                     /locus_tag="VLA74_04860"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSF50073.1"
                     /translation="MQIVKVSSVSFEYGSDKILDDISFSVDEGDFLGIIGPNGAGKTT
                     LFFCMLGLIDGYNGEIKIFGEDIRRNKKILKQIGYIPQRKSIDRRFPLTIKELVSLSI
                     TNKSYIDNVDKVLRYVDLYDNRNKIIGQLSGGQQQRVLIAKALVNNPKMLMLDEPTNE
                     LDQASQDNFYLFLKQLN"
     gene            834..2201
                     /locus_tag="VLA74_04865"
     CDS             834..2201
                     /locus_tag="VLA74_04865"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF50074.1"
                     /translation="MIIEQGSIKSREMSKRRWVLRYLILAVIAIILIIKIYFTIFIID
                     FTVGFYSVLTTFILFTLFSLSYLRYRDPFNEIKKDNPSKENPLVSIVIPVKNEEGNIE
                     RCIESCINSSYGYKEIIVVNDASTDKTPIILEQIKKSNPNLVIIHLPVNLGKKHAIKE
                     AIKIAKGEFYFFMDSDCNMATDAITNAVKIFLSDKEIGAITAHGRVRNAEKGNLLEKI
                     QDVWFDGQYRILKGMESSFSSLTCCSGALSAFRREAVKQYMDKWANDRFLGIDFRFAT
                     DRRLTAFVLEKVKDLDKDIHRNKTIIEFNDNKIKLWKLKYSLKVNVEIGVPDTLGSLI
                     KQQIRWRKSFIRSIFATGSIYWQRPLPAAIFYYVTIVLRLFRPYIIIKSIILLPLSGD
                     YLSGLLYLSGAAFAGLLYGIDVRLRRPGYSRWFYRPLMNLLSTFLFTWLLIYAAITIK
                     NKTWR"
     gene            complement(2895..3041)
                     /locus_tag="VLA74_04870"
     CDS             complement(2895..3041)
                     /locus_tag="VLA74_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50075.1"
                     /translation="MQLDVYPSRIRRPNQVILLHESGAVTEGYLIFRNPFLPSYQIVL
                     YKDR"
     gene            complement(3401..4318)
                     /locus_tag="VLA74_04875"
     CDS             complement(3401..4318)
                     /locus_tag="VLA74_04875"
                     /inference="COORDINATES: protein motif:HMM:NF014686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSF50076.1"
                     /translation="MLVPGAGGPAAINTIKSLRLSKFDGQIVSTDSDPLSAGFFLSDL
                     YYVVPIVSDKSFIDVLIKIIKKNNIKVLMPSSGYDIYQYSIHNKLLSEMGVQAVVSRK
                     EVLDVCQDKLLSFKKLSNRFPFAFSTLYIKQIDKFPVIAKPRFGKGSKDIIKIEDLTD
                     LKYVTAKYNNMIFQEYLPGVEYSVDVLSDLNENPLVAIPRIRIQTKAGISVKGKIIRN
                     QSIENLCMDLAKHLGIKGPCVIQLKQSESGELKIIEINPRFGGGTFFSTLAGINFPAL
                     ILDMVCNKEIVLPEVSEITILRYYEEVVL"
     gene            4485..5129
                     /locus_tag="VLA74_04880"
     CDS             4485..5129
                     /locus_tag="VLA74_04880"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSF50077.1"
                     /translation="MNIRQDFHIHANYNDHSELNLTIKNAIEEAEKIGLECIAFTEHV
                     RRSSEWINDYIKEIEQYKKKNKIKIIVGFEAKILSDGNIDCNENVARNFFIVASFHTT
                     FQDKNKWLELLKKTIKNELVDVIGHLAPENYFEIYDHEIEEIGKLINENNKIVELNAK
                     YRRPPEKWIRIFLKNGVKFHLGSDAHSLNEIGRFESINNLIQIVDEFNFNRNKD"
BASE COUNT         2056 a          759 c          892 g         2000 t
ORIGIN      
        1 attcagttgc tttaaaaaga ggtagaaatt atcttgactt gcttgatcaa gttcgtttgt
       61 tggttcatct aacatcaaca ttttaggatt attaacgagt gcctttgcaa ttaaaacacg
      121 ttgttgctgt ccaccagata attgaccaat tattttattt cgattatcat aaaggtcaac
      181 atatcttaag actttatcca cattgtcaat atatgatttg tttgtaattg aaagagaaac
      241 caattctttt atagtaaggg gaaaccttct gtcaatagat tttctttgtg ggatatagcc
      301 aatttgtttt aaaattttct tatttcttct aatatcttcc ccaaatattt ttatttcgcc
      361 attatatcca tctattaaac caagcataca aaaaaataaa gtggtcttac cagcaccatt
      421 tggtccaata atccccagaa aatcaccttc atccacacta aaagaaatat cgtctagaat
      481 tttatccgaa ccatattcaa atgatacaga actaaccttt actatttgca tttttcgcac
      541 ccggatttca tcgattgatt ataatatgta aaaactacta ggttacgagg atgagggttg
      601 atgaacaaca aatacataat aatataaata aataatatta actatatatg ctttctttaa
      661 taatcattat aaatttacat tatttctttt attaaactta acatcacaat aaatttttat
      721 gataatcaga ttaaatataa tctactatta tatttaatat cgaatttcgt atctgaaata
      781 aaaatagtat aaaaaaatgt caaccaaaat aaaagtatga aattgtgata aaaatgatta
      841 tcgaacaagg gtcaatcaaa tctcgtgaaa tgagcaagag gagatgggta ttgagatatc
      901 ttatacttgc tgttatagcg attattttga taataaaaat atatttcacg atttttatta
      961 tagattttac agttggattt tatagtgtcc ttacaacatt tattttattt accttatttt
     1021 ctttgtcata cttgagatat agagatccct ttaatgaaat taagaaagat aatccgtcaa
     1081 aggagaaccc gttagtatca attgttattc cagttaaaaa tgaagaagga aatatagaaa
     1141 gatgtataga atcttgcata aattcgtcat atggatataa agaaatcatc gtagttaatg
     1201 atgcaagtac agacaaaaca ccaattattc tagagcagat aaaaaaaagt aatccaaatt
     1261 tagttataat acacttgcca gtgaatttgg gcaaaaaaca cgctataaaa gaagctataa
     1321 aaatagcaaa aggcgagttt tattttttta tggacagtga ttgcaatatg gcaacagatg
     1381 ctatcacaaa tgcagttaaa atatttctat cagataagga aattggagct atcacagcgc
     1441 atggaagagt tcgaaatgcg gaaaaaggca atttactaga aaaaattcaa gatgtttggt
     1501 ttgatggtca atacagaatc ctaaaaggaa tggagagttc cttttcatct cttacttgtt
     1561 gttctggtgc gttatcggct tttagaaggg aagcagtgaa acaatatatg gataaatggg
     1621 ctaacgatcg ttttttaggg atcgatttta gatttgccac agacagaaga cttactgcat
     1681 ttgtccttga aaaggtgaaa gatttggata aggatataca cagaaataag acaattattg
     1741 aattcaatga taataaaata aagttatgga aattaaaata tagtttaaag gttaatgtag
     1801 agataggggt tccagatacc ttaggttccc taatcaaaca acaaatacga tggaggaaga
     1861 gttttattag aagtatattt gctactggtt caatatattg gcagaggccg ttacctgctg
     1921 ccatttttta ttatgtcact atagtgttga gattattcag accatatata attataaaat
     1981 caattatttt gttaccgtta tcaggagatt atcttagtgg attactttat ctttcaggtg
     2041 cagcatttgc aggtttattg tatggtattg acgttagatt gagaagaccg ggttattcaa
     2101 gatggtttta cagaccattg atgaatttat tatcaacttt cctttttact tggctgttaa
     2161 tttatgctgc aatcacaata aaaaataaaa cctggaggta gaatacatat tcttacaaac
     2221 tctataaaaa tctatttgat ttattaatat tctgagatca ataaactata ataattattg
     2281 ttttgttttg ttttgttttg ttttgttttg ttttgttttg ttttgttttg ttttgttttg
     2341 ttttgttttg ttttgttttg tttcgcaact atgattttca ttaattttga aaaggtaact
     2401 ccgtctttat ataagaaaaa atttttgtta atttgttcct gtcaaaaatt tggttcatct
     2461 tatcgatttc tgagtcgagc aatttagcaa tagttaacat aaataatcat actagtatat
     2521 agtttttagc gtaactaatt tagtttcgta atttagggtg tgttttattg tctcaattag
     2581 agttatacta gataatgagt atagaaaaga tgcaactata gaagaaagct ctatgcaaca
     2641 agttttgaag tagaaaagct aaaagcagct gggttgcaga aaatcaatta aacaaatcga
     2701 gtttgtggac ggatagatca atatataaat ttcatacaga atactaaatg gagtagaaga
     2761 taaaacatga agtggtagat ctacggatgt aaaggttaca atgtttaaaa tatgacggga
     2821 atttgaggac aacaagagag gatcagattc aaataagtga tgaatctgac ttacaataaa
     2881 atggcgttac gatatcatct atctttgtat aacactattt gataagaagg aagaaatgga
     2941 tttctaaaaa ttaaataccc ttctgtaacc gctccagatt catgcaaaag aatgacttga
     3001 tttgggcgtc taattcttga tggatacaca tctaattgca caatataatg agttcaccat
     3061 tattacaatt gttgattatc taaaccatgt aaggaaaaga tttggtaaat ttaccttgtt
     3121 tgttgatagg gcaattcgtc attgttccaa aatcactgga aaccatcttg agctaaaata
     3181 attaaagatg atataagaat agaatacttt catgttagtt cactagattt aatgccgtag
     3241 aaaattgctg gagtcaaggc aagtaccaaa tacttaccta ttgtcgtcat atttcgtttg
     3301 atgatttgaa atattcattc ggagtaatca gagatacatc atatcatgtg aatactgtaa
     3361 gatatctaat gagattaatg gattagggaa attatgttat ctagagtact acttcttcat
     3421 agtatctcaa aatcgtaatt tctgagacct ctggaagtac tatttcttta ttacaaacca
     3481 tatctaaaat taaagcagga aaattaattc cagcaagtgt agaaaaaaaa gtacctccac
     3541 caaatctggg attgatttca attattttca attctccgga ttcagattgt tttaattgta
     3601 taacacacgg acctttaatt ccgagatgtt ttgccaaatc catacacaaa ttctcaatag
     3661 attgatttct gatgattttg cccttgacag agattcctgc ttttgtttga atccgtattc
     3721 ttggaatggc aacaagagga ttttcattta gatcagaaag aacatcaact gaatattcga
     3781 ctcctggaag atattcttga aatatcatat tattatattt tgcagtcaca tattttaaat
     3841 cagtgagatc ttcgattttg ataatatctt tactaccctt tccaaagcga ggtttagcta
     3901 taacaggaaa tttatcaatt tgcttaatgt aaagtgttga aaaagcaaat gggaacctgt
     3961 ttgaaagttt tttaaatgat aataatttat cttgacagac atctaaaact tctttcctgc
     4021 ttactactgc ttgcacgccc atttcagata ataacttatt atgaatacta tattgataga
     4081 tatcatatcc tgatgaaggc atcaaaactt taatattatt ttttttaata atttttatca
     4141 atacatctat aaatgatttg tcgcttacaa taggaacaac ataatataaa tcactaagga
     4201 aaaaaccagc tgagagtgga tcggagtctg ttgagactat ctgtccatca aacttagata
     4261 atcttaagga ttttattgta tttattgctg caggcccacc agcacctgga accagcacat
     4321 tcaaatttat cattaccaaa tttaaattga tacgtaataa ttaaattaca tgttcattta
     4381 attacgtacc ttacatattt gtaatacatc gaatatttac ataaaaaatt ttagggtttt
     4441 tgtgatatta tagattttta taaaataatt atttaattgc ttgtatgaac attagacaag
     4501 attttcatat tcacgcaaat tataatgatc actcagaact taatttaaca ataaaaaatg
     4561 ctattgaaga ggcagagaaa ataggattag aatgtattgc atttacagaa catgtaagaa
     4621 ggtcctctga atggattaat gattacatta aagagataga acaatataaa aaaaaaaata
     4681 aaattaaaat aatagtcgga tttgaggcaa aaattttatc tgatggaaat atagattgca
     4741 atgaaaatgt tgcaagaaat ttttttattg ttgcaagttt tcatacaaca tttcaagata
     4801 aaaataaatg gttagagctc ctcaaaaaaa ctattaaaaa tgagcttgtt gatgtaatag
     4861 gacatttggc tccggaaaat tattttgaaa tatatgatca tgaaatagaa gagataggta
     4921 agctcataaa cgaaaataac aaaattgtag agttaaatgc aaaatatcgt agaccccctg
     4981 agaaatggat aagaatattt ttaaaaaatg gtgtgaaatt tcatttgggg agcgatgctc
     5041 attctcttaa tgaaataggt agatttgaat caataaataa tcttattcag atagtagatg
     5101 aatttaattt caatcgtaat aaggactgaa tgtagatgat tgggtatgct ccattctaga
     5161 gaattattta aattagttta aacaaaccta acaaagataa actaatcttg ttttgcacag
     5221 aaccatgcat caaggcctgt ccacgttcta tgcgatcatt atacacagat cagtttctcc
     5281 cagaaattac gaaaataatg cctttaaaag atattaatgg gtcacactat aattaatgct
     5341 taaatttttg aatttctttg tgtcaaaagc actcgtattt tccataaatt acagattaga
     5401 aatagcaact acaatagcat attctaacaa tttatcggct attttgctag tcatagtgta
     5461 taagatgcgc atttttttta aagatcctac tgaattaaat attttgtttc ataatatata
     5521 tttttaatac cagccagtca aactatatca aatttttatc gtttttattg ttaaattttc
     5581 tgtttattag aatatagtga agtgtctaaa cgtttattat ctcttcataa tatagaattt
     5641 atatgcgtta attctgctaa ataatatggt aaatccgttt ggacaatgag ttggacttat
     5701 atgttaa
//
LOCUS       DATIAS010000249         2285 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1270636, whole genome shotgun sequence.
ACCESSION   DATIAS010000249 DATIAS010000000
VERSION     DATIAS010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270636"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..323
                     /locus_tag="VLA74_04885"
     CDS             189..323
                     /locus_tag="VLA74_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50078.1"
                     /translation="MGCELFVIGIMAGLTLTATALVFQFFSDRKKEFKNLTTELKVNI
                     "
     gene            389..763
                     /locus_tag="VLA74_04890"
     CDS             389..763
                     /locus_tag="VLA74_04890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50079.1"
                     /translation="MINKKFLNNNYNDKKQLGNDDIILQWLAFQKQENEDKIHSSNTQ
                     ILNKYYKISIDCIDSCTDLIENYQNLQKVYEEISKKIGILEKKHRETKVRLEKEILFL
                     NIENWKTIRKKIKTELDRSNVY"
     gene            1106..2032
                     /locus_tag="VLA74_04895"
     CDS             1106..2032
                     /locus_tag="VLA74_04895"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSF50080.1"
                     /translation="MSSKTSWHSLNAQQVLDNLHSHLDGLTGSEAKEKLEKYGLNQIE
                     KEKQRSSFFIFIRQLKDPMILILFVATFISFILGEIIDGIIIVAILIMTTIVGFIQEF
                     RSEKAIDALMKMTATTCRVLRDNKEKIMETKYLVPGDIILLYPGDKIPADSYIIEAYN
                     LETNEAPLTGESLPIEKMQTVLPKETQIQDRKNILYAITTIVNGRGKAVIFETGRNTE
                     IGKITTAVQGITTQKTPFELKIKHIVKLLSLSMLIIVGILSVISLIRGLPILEILIGS
                     ISLAVAAIPEALPAIITTSLTIGAYRMAKKMH"
     gene            2101..>2285
                     /locus_tag="VLA74_04900"
     CDS             2101..>2285
                     /locus_tag="VLA74_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50081.1"
                     /translation="MTKGEMTVKQVYMYDNRFIEVTGVGYNTKGSLSSKSNINKNDLM
                     LLVKCTVLCNDAKIELL"
BASE COUNT          904 a          298 c          332 g          751 t
ORIGIN      
        1 aataataata ttttttgtga tataacctta aatcaaataa cgataagaaa attgatggtt
       61 attattctta ttattatttg ttattcacat cttatatcta tcaataaata ttaaattata
      121 ctttacatca taatattata atcaattcaa ataaattaaa atagtagaat gttctaatat
      181 ttatgacaat gggttgtgaa ttatttgtta taggaattat ggcaggttta actttaacag
      241 caacagcctt agtatttcaa ttctttagtg atagaaagaa agaatttaaa aatttaacaa
      301 cagaattgaa agtaaatata taaaaataga actctaatta tttttctaaa atccatataa
      361 tttaatatac taaaagaaat aataccgcat gataaataaa aaatttttaa acaataatta
      421 caatgataaa aaacaattag gaaatgatga tattattctt caatggctag cttttcaaaa
      481 acaagaaaat gaagacaaga tacattcttc aaatacccag attctaaata aatactataa
      541 aatttcaatt gattgtatcg attcatgtac cgatttaatt gagaattatc aaaatcttca
      601 aaaagtttat gaagaaatta gtaaaaaaat tggaatactt gaaaaaaaac atagagagac
      661 aaaggtgaga ctagaaaaag aaatactatt cttaaatatt gaaaattgga aaactattag
      721 aaagaaaatt aaaacagaac ttgatagatc caatgtatat tagattatta catttttttc
      781 tcaccttcta atttattatt tgaattagat gtaatcatta gattctaatt ttgaaatgtt
      841 attgaagaag gcaggatcca ttaacttgag attatcacct cctatgttag acaggtaata
      901 ttattttctg ctatcatgta ctattgtaca ttcatatgaa tagttctagc cggttataca
      961 catgacgatt atcacaactt ttttacccat actagattag aaataaggtg ttcacaactt
     1021 atcttttatt gcttaaatta gcagggctct tttttgtcat agcaactctt ttatttcaat
     1081 ctcttttatc tcatgatatc tgcatatgtc ctccaagacc tcatggcaca gtttaaatgc
     1141 gcaacaagtt ttggacaatc ttcatagtca tttagatggt cttacaggat cagaagcaaa
     1201 agagaaatta gaaaaatatg gtctcaatca gattgaaaaa gaaaaacaga gatcttcatt
     1261 ttttatattt ataagacagc ttaaagatcc aatgatttta atactttttg tagcaacatt
     1321 tatttcattt attttaggag aaataataga tggaattatt atagttgcaa tattaattat
     1381 gactactatt gtaggattta tccaagagtt tagatcagaa aaggctattg acgctctaat
     1441 gaaaatgact gcaacaacat gtagagttct tcgagataat aaagaaaaaa ttatggagac
     1501 aaaatatctt gtaccgggag acataattct tctatatccg ggagataaga ttcctgcaga
     1561 ttcctatatt attgaagcat ataatctgga aacaaatgaa gcaccattaa ctggagaatc
     1621 actgcctata gaaaagatgc aaacagtact gccaaaggag acacaaatac aagatagaaa
     1681 gaatatactc tatgcaatta ctacaatagt aaatggtaga ggaaaggcgg taatttttga
     1741 aacaggaaga aatacagaga taggaaaaat cactacagct gtccaaggca taactactca
     1801 gaaaactcct tttgaattaa agatcaaaca tatagtaaaa ttacttagtt tgtctatgct
     1861 aataatagtt ggtattttaa gtgttatttc tttaatccgt ggtttaccta tactagaaat
     1921 tctgattggg agtattagtt tagctgttgc ggcaattcca gaagcactac ctgctataat
     1981 tacaacttca cttacaatag gagcatatag gatggctaaa aaaatgcatt aataagacga
     2041 ttaccagctg ttgaaacact aggttctaca acagtaattt gtagtgataa aactgggaca
     2101 ttgacaaagg gcgaaatgac cgtaaaacaa gtttacatgt atgataatcg tttcatagaa
     2161 gttactggag ttggatataa tactaaaggt agtctatctt ctaaatcaaa cattaacaaa
     2221 aacgatttaa tgttgcttgt taaatgtaca gtattatgca atgatgcaaa aatagaatta
     2281 cttca
//
LOCUS       DATIAS010000250         3698 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1270972, whole genome shotgun sequence.
ACCESSION   DATIAS010000250 DATIAS010000000
VERSION     DATIAS010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270972"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VLA74_04905"
     CDS             complement(<1..276)
                     /locus_tag="VLA74_04905"
                     /inference="COORDINATES: protein motif:HMM:NF013336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50082.1"
                     /translation="MPRSHGSRRKSRSVLTKSNVLRGITYLLINYKIGDKVMIKIDPS
                     EHNTMPHRRYQGKIGTVLEVGKRIVRIAIQIGNKEKILQTKRNHIKLI"
     gene            complement(322..1302)
                     /gene="radA"
                     /locus_tag="VLA74_04910"
     CDS             complement(322..1302)
                     /gene="radA"
                     /locus_tag="VLA74_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair and recombination protein RadA"
                     /protein_id="HSF50083.1"
                     /translation="MINKNSANKKLKLEDIEEIGPATKMHLINAGIESVRDLVVRGPQ
                     NISEVTGISIEKAVDLCNKARMKLEEFEIIDKSFTTATELYKKRLNIERISTGSKNLD
                     ELLGGGIETGAITEIYGEFGSGKTQICHTTAVLVQQKKEKGGLEGGIIYVDTENTFRP
                     ERIVSISKSRNIDYSPVLENIIVAKAFNSSHQELIIQEIGKIIENNNIKLVIIDSAIS
                     HFRAEFLGRGTLSERQQKLNKLMHILMRIAETYNIAIIITNQIQSAPDMIFGDPYRPT
                     GGNVMAHSSTYRIYLKKAGKNRIARIVDSPYHAEIEALFSLSDEGISDPV"
     gene            1445..2113
                     /locus_tag="VLA74_04915"
     CDS             1445..2113
                     /locus_tag="VLA74_04915"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional precorrin-2
                     dehydrogenase/sirohydrochlorin ferrochelatase"
                     /protein_id="HSF50084.1"
                     /translation="MIVDLSLNGKNVLVIGGGVEGYRKVRGLLGQNCKITVVSDRTNS
                     NLRTLSDEGKINLIKQKITDTNVLDNFKDVFLVLAATDDKDLNRKIVEKGRLFRSFVY
                     AADDPDVSDFSYASVINIEGIMQVAISTYGKSPIMARRLRIKAERILRRIITKTDIDN
                     TKLQEFARIQARPIINTVSERKKFLYSLIRDENIQTLIKDSRMEEAKTLTLKLLNKWG
                     VSGK"
     gene            2092..3405
                     /gene="hemA"
                     /locus_tag="VLA74_04920"
     CDS             2092..3405
                     /gene="hemA"
                     /locus_tag="VLA74_04920"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HSF50085.1"
                     /translation="MGRVWKIMTLVSKFIEIVNFRVTYKKAPIHLLEKFSFKDIEGAH
                     TFLLENFNLRECLILQTCNRVEIFGICDSTIDTENIIKFWAQHCGLSVETFSEMIVVE
                     NGEDVVRHLFKLVSGLDSLVLGEDQILGQVKRSYEFSRSNNFTKNVLSLVFEKSIRVG
                     SKVRYLTGINKGSVSVGSMAVNLAEEKLGTLDNKNILLIGSGEGAGLVAKTLKKRNIF
                     FMNTSRTFERAKSFAQSMGGSPIFFEKALESLGEMDIIFVSTVAPYYLLTYDRIERAA
                     NSRSKSLLIFDLSNPRTVEETCSSIENINLFNMDEIGDIVKRNIQFRRKEIESAEDII
                     EDEMKNIDILLKRKKADPVVISVFRNVDKIRERELKKALSILGKNMSPQEMKIIEQFS
                     HALLEGIISTPMNNLRRYIQSDTSDEQEIMKIAAKLFNYDNESTN"
     gene            3389..>3698
                     /locus_tag="VLA74_04925"
     CDS             3389..>3698
                     /locus_tag="VLA74_04925"
                     /inference="COORDINATES: protein motif:HMM:NF012702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HSF50086.1"
                     /translation="MRAQINSNYGLLGGSGYPFVRLRRLRKNKAIRELLQETRLSVKD
                     FICPIFVQSGLKEPKNISSMQDVKRLPLSKITDEVDSILKLGINSVILFGIESDKDDK
                     A"
BASE COUNT         1209 a          556 c          648 g         1285 t
ORIGIN      
        1 tattaatttt atgtgatttc ttttagtttg aagaatcttt tctttgtttc caatttgtat
       61 agcgattctt actattcttt ttccaacttc taagacagtt cctatttttc cctgatatct
      121 tctatgtggc atagtgttgt gttcactcgg atcaattttt atcatgacct tgtcaccaat
      181 tttataattt attaataaat aagtaatacc cctaagtaca ttactttttg ttaatactga
      241 tctcgatttt cttctacttc catgtgaacg tggcatatta ctcctagatt aattccttaa
      301 tttaacatta actgataaat ttcaaactgg gtcagaaata ccctcgtcac ttagggaaaa
      361 gagagcttca atttctgcat gatatggact gtctacaatc ctcgctatcc tattctttcc
      421 tgcttttttt aaatatattc tataagtact ggaatgtgcc atgacattcc ctccggtcgg
      481 tctatatgga tccccgaata tcatatctgg agcagattga atttgattag tgattattat
      541 tgcaatgtta tacgtctcag caatcctcat aaggatatgc attaatttat ttaatttttg
      601 ctgtctctca gaaagtgtac ctcttcctaa aaattctgct ctaaaatggg aaatagcaga
      661 atcaattatt actaacttga tgttgttgtt ttctattatt tttccaattt cttgaataat
      721 aagctcctga tgagaactgt taaaagcttt tgcaacaata atattttcta agacaggcga
      781 ataatcgata ttccttgatt ttgatataga aactatcctt tcaggcctga aggtattttc
      841 tgtgtctacg tatatgattc caccttctaa accccctttt tctttttttt gttgtaccag
      901 aactgctgtg gtgtgacaaa tttgtgtttt tccagaacca aattcaccat atatttctgt
      961 gatagctcca gtttcaattc ccccgcctag taactcatcg agatttttcg atcctgtgga
     1021 tattcgttca atatttagtc tttttttata taactccgta gcagttgtaa atgatttatc
     1081 tataatctca aactcttcca acttcattct tgctttatta cacaaatcta ctgccttctc
     1141 gatacttatt cctgttacct cagaaatatt ctgcggtcct ctgacaacca agtctcttac
     1201 ggattcgatt cctgcgttaa ttaaatgcat ttttgtcgca gggcctattt cttcaatatc
     1261 ctcaagtttt aattttttat ttgcggagtt tttatttatc aattaggatc attttttact
     1321 atattatttt ataatcaaat aaatattgtt taggattcaa aattattaat agttttttct
     1381 tttctttttc ttgaaataat ttaaataatg taatggatat tgtttcttca acacggtgtg
     1441 gtagttgata gttgacctga gcctcaatgg aaaaaatgtc ctagttattg gaggaggggt
     1501 agaaggctat agaaaagtac gaggcctatt aggtcaaaat tgcaaaatca cagtcgtaag
     1561 tgataggact aactctaatc ttcgtacatt atctgacgag ggaaagatta atttaataaa
     1621 acaaaagatt accgacacca atgttttaga taattttaaa gacgtttttc ttgttttggc
     1681 tgcaaccgat gataaggacc tgaatagaaa aatcgttgag aaaggtagat tgtttagatc
     1741 ttttgtatac gctgctgatg atcccgatgt tagcgacttt tcctatgctt cagtaataaa
     1801 tattgaaggc attatgcaag tggcaatttc aacctacggt aaaagtccta ttatggccag
     1861 gagattaaga ataaaagcag aacgtatttt aagaagaata attacgaaga cagatattga
     1921 caatacaaaa ttacaggaat tcgcaagaat acaagcaagg cctattatca acactgtatc
     1981 ggaaagaaag aaattcttgt attctttaat tagagatgag aatattcaaa cattaattaa
     2041 agacagtagg atggaagaag ccaaaactct tactctcaaa ttgttgaaca agtggggcgt
     2101 gtctggaaaa taatgacgtt agtaagtaaa ttcattgaaa tagtaaattt tcgcgttacc
     2161 tataaaaaag cacccattca tttactcgaa aaattttctt ttaaagacat cgaaggtgcc
     2221 catacatttt tactagaaaa tttcaatcta agagaatgtc taatattaca gacttgtaat
     2281 agggtggaaa tctttggaat atgtgatagt acgatagaca cagaaaatat tataaaattc
     2341 tgggcacagc attgtggatt atcagtagaa acgttttctg aaatgatagt tgtggaaaat
     2401 ggagaagatg tggtcagaca tctatttaag ttagtatcag gattagattc attagtttta
     2461 ggagaagatc agattctagg tcaggtcaaa agatcgtatg aattttctag atcaaataac
     2521 tttacaaaaa atgttctatc tcttgttttt gaaaaatcaa taagagttgg cagtaaggta
     2581 agatatctta ctgggatcaa taaaggtagt gtttctgttg ggtctatggc agttaatctc
     2641 gcagaagaaa aacttggaac gttagacaac aaaaatattt tgttaatcgg ttcgggtgaa
     2701 ggggcaggtc tggttgcaaa gacccttaaa aaacgaaata tcttttttat gaataccagt
     2761 agaacttttg aaagagcaaa gtctttcgcc caatcaatgg gaggaagtcc gatatttttt
     2821 gaaaaagctc ttgaatcatt aggagaaatg gatattatct ttgtcagcac cgtagcgcct
     2881 tattatttgt taacttatga tagaatcgag agagcagcaa attctaggtc aaaatcactc
     2941 ttaatttttg atctatcaaa tcccagaact gttgaggaaa cttgttcatc tatcgaaaat
     3001 attaatttat ttaatatgga tgaaattgga gatatagtga agagaaatat tcagtttaga
     3061 cggaaggaaa ttgaatcagc tgaggatatt attgaggatg aaatgaagaa tattgatata
     3121 ttgttgaaga gaaagaaagc tgatccagtt gtaatatctg tttttcgcaa tgtagataag
     3181 atccgggaaa gagagttgaa aaaggcttta tcaattctag gaaagaatat gagtcctcaa
     3241 gaaatgaaga taattgaaca attttctcat gctttattgg aaggaattat ttctactcct
     3301 atgaataatc tacgtagata tatccaaagc gatacaagtg atgaacagga aattatgaaa
     3361 attgctgcta aattatttaa ttacgacaat gagagcacaa attaattcaa attatgggct
     3421 attaggagga tctggatatc cttttgtccg cctgaggcgg ttgagaaaaa acaaagctat
     3481 acgagaactg ttgcaggaaa caagactttc tgttaaggat tttatttgtc caatttttgt
     3541 acaatcggga ttaaaggaac caaaaaatat atcttctatg caagatgtta agcgattgcc
     3601 tttatctaaa atcactgatg aagttgattc aattttgaag ttggggataa attccgtaat
     3661 cttgtttgga attgaatctg ataaagatga taaagcaa
//
LOCUS       DATIAS010000251         2424 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1816556, whole genome shotgun sequence.
ACCESSION   DATIAS010000251 DATIAS010000000
VERSION     DATIAS010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1816556"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1006)
                     /locus_tag="VLA74_04930"
     CDS             complement(185..1006)
                     /locus_tag="VLA74_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50087.1"
                     /translation="MFEKILYNFLQIKREYLQNFKPTNIIAEILPKECSDFFPIDKQV
                     LTKLHQFVSNNTIYFKKTDVLINNMNFVSYEGDVNEFYLSSKKYDTNYQPFYPTWMLS
                     AFLLCLQIKELGFTELIDIGAGDGRIPYCGSLLNLRSIGIELDTNLTELQRELSNLTD
                     IKFEIINGDASSYNFAGFNLCKPIFFVSGLPEMGEMFVDNVIQTMIQNRFETFGIVFL
                     GSIFKRKFVNKVKNYGWGEIIKKNNLKIIEEINLPTHWTNDNNTETKYLITQLLK"
     gene            complement(1265..2185)
                     /gene="sucD"
                     /locus_tag="VLA74_04935"
     CDS             complement(1265..2185)
                     /gene="sucD"
                     /locus_tag="VLA74_04935"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HSF50088.1"
                     /translation="MMSNKFDLFNILIGNEKDSDYKNKPVIIQGITGSFGSTHTKLMK
                     DYGTNIVAGVTPGKGGQSFEEIPVFNTVAEAVQNNSIEISGIFVPAPFFLNAAKEAID
                     NGIKLLVAIPEHVPVIDAIKIFEYAEKKGARIIGPNTPGVIVPEIMKVGIMPSKPFIQ
                     GSTAVFSRSGTLMYEVSHTLSNAGYGQRICLGIGGDPINGTNLIEAFDLIKERDDIES
                     VVVVGEIGGDAEENLAEYIISTNFSKPVVAYVAGRSAPKEKKMGHAGAIVYGNYGSAD
                     SKVSNYSKANVPVAKRPGEVPELLKSKLKK"
     gene            complement(2203..>2424)
                     /locus_tag="VLA74_04940"
     CDS             complement(2203..>2424)
                     /locus_tag="VLA74_04940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-CoA synthetase subunit beta"
                     /protein_id="HSF50089.1"
                     /translation="KIRTILVNLFGGIVRTDLVAQAILNAYNDGTITVPVFARITGAE
                     SEKARELLINSKARLFNTVEEAINAAVKN"
BASE COUNT          799 a          401 c          299 g          925 t
ORIGIN      
        1 acagttattg taaacaaact gattactaag gatataatta attaaaaata aatattttat
       61 agctaagatt tctatatctt ttctatctta tcaactaaat aattcaataa atgagtaaat
      121 gtgatgatag ggatatttca atacggttaa aagcataaca aaattatttt tatattgtat
      181 ttgtttattt aagtaattgt gtaatcaaat actttgtttc agtattatta tcgtttgtcc
      241 aatgtgttgg aagattaatc tcttctatta tttttaaatt atttttttta ataatttctc
      301 cccatccata atttttaact ttatttacaa attttctttt gaaaatactt cccaaaaata
      361 caataccaaa tgtttcaaat ctattttgta tcattgtctg aattacattg tccacaaaca
      421 tttctcccat ttcaggaagt ccagatacaa aaaaaatcgg tttacataaa ttaaatccag
      481 caaaattata acttgaagca tcaccattaa ttatttcaaa tttaatatca gttaagttgg
      541 atagctctct ttgtaattcg gttaaattag tatctaactc aattccaatg gatcttagat
      601 ttaataatga accacaataa ggtattcttc catctcctgc accaatatcg atgagttcag
      661 taaatcctag ttcttttatt tgcagacata ataaaaatgc agataacatc catgtaggat
      721 aaaatggttg ataatttgta tcatatttct tactacttag ataaaactca tttacatcac
      781 cctcgtaaga gacaaaattc atattgttaa tcaaaacatc tgttttttta aaataaatag
      841 tgttattaga tacaaattga tgtagctttg ttaatacttg cttatcaata ggaaaaaaat
      901 ctgaacattc ttttgggagt atttctgcta ttatatttgt tggtttaaag ttttgtaagt
      961 actctctttt gatttgtaga aaattatata aaattttttc aaacattttt agtagataaa
     1021 ataaatttta ttaatattat tgttaataaa cagattcagc agatggcctt aaacctcttt
     1081 tgtacgaaga ataaccgcat attgagcatt tgtatattct tttccgttta tatgtatata
     1141 aaatgtcttc tttttcaacg atctgatgtg aagttttttg catacacttg tcacaaaatc
     1201 taatctcatt catttatctt atataatata ataaaaagag gtattaaaaa aatttttgta
     1261 catgttattt tttaagttta gattttaata actccggaac ttcaccaggc ctttttgcta
     1321 ctggtacatt tgcttttgaa taatttgaaa cctttgagtc tgctgaacca taatttccat
     1381 atactattgc acctgcatga cccattttct tttccttagg agcagatcta cctgcaacat
     1441 aagctactac tggtttggaa aaattggttg aaatgatata ttctgccaga ttttcttcgg
     1501 catcaccgcc tatttctcca acaactacaa ctgattcaat atcatcccgt tccttgataa
     1561 gatcaaatgc ttcaataaga tttgttccat ttataggatc tcctccgata ccaaggcaaa
     1621 ttctctgtcc atatccagca ttagatagag tatgtgatac ttcatacatg agcgttccac
     1681 ttcttgaaaa aaccgctgtc gaaccttgaa taaagggttt agatggcata atacctacct
     1741 tcattatttc gggaactatg actccaggag tatttggtcc aatgattctt gcaccttttt
     1801 tttcagcata ttcaaaaatt tttatggcat ctattacagg aacatgttca ggaattgcaa
     1861 ctagtaattt tataccatta tctatcgctt cttttgctgc attcaaaaag aaaggtgcag
     1921 gaacaaaaat tcctgatatc tctatggaat tattctgtac agcttcagca actgtattga
     1981 aaacaggaat ttcttcaaag gattgacctc cttttcctgg agtaactcct gcaacaatat
     2041 ttgttccata gtctttcatt aatttggtgt gagtagaacc aaaactacca gtaattcctt
     2101 gaataattac tggtttattt ttataatcac tatccttttc gttaccaatc aaaatattga
     2161 ataaatcaaa tttattactc atcattttaa ttaccttttc tcttagtttt tcaccgctgc
     2221 atttattgct tcttctacag tattaaataa tctagcttta ctattaataa gtaattcacg
     2281 agccttttca gattcggcac cagttattct tgcaaaaaca ggaactgtaa tagtaccatc
     2341 attatatgca ttaagaattg cctgtgcaac taaatctgtt cttactattc ctccaaataa
     2401 attcacaaga attgtacgaa tttt
//
LOCUS       DATIAS010000252         2863 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_44997, whole genome shotgun sequence.
ACCESSION   DATIAS010000252 DATIAS010000000
VERSION     DATIAS010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44997"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..1724
                     /locus_tag="VLA74_04945"
     CDS             174..1724
                     /locus_tag="VLA74_04945"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSF50090.1"
                     /translation="MPQLKIDADLRSIAKGNVLSDDWSRKIYSVDASEYCFFPSCVIQ
                     VKDKEDVSNICQYAYSHNVSITGRGAGTGLLGQSLTSGICLDFTKYMNKLIEFENDYV
                     IVEPGIVKAILDKELKKKGKFLPPDPSSGNFCTIGGMIANNSSGIHALGYGNTIDFLD
                     GIEIVYSNGNIEPLFEPYNNTNDFKVRNSHVPPTNKIKQLFGLFSQDILQHISLKFPK
                     VTKNSCGYRIDAIIDNIGRYLPHKIFTSSECTLGITTLAKFKILDLPLYKSIIVIGFE
                     NILKAVKVVPIILTFFPSALELLDSSVLNYENMLSYNKASYKFNDNKNGTLLFIEFDG
                     NNLVDVETRLRLCREKLSAYGEIIEITSDKVSSEKIWAARKSALNNVMKLTVGSRKPI
                     SLIEDTVVNPNYLYEYTLFLLNVYEKYKLDYVFYGHAGNGNLHTRPIIDTASNVYKDL
                     IESLTADVFSKVYEFSGSITAEHGDGISRTKYISHMYGSILFDIFKKIKFIFDPTNIM
                     NPGKKIIQ"
     gene            complement(1763..2509)
                     /locus_tag="VLA74_04950"
     CDS             complement(1763..2509)
                     /locus_tag="VLA74_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50091.1"
                     /translation="MVHFILIDVTKSSILTLLIYIIITTIPLDIFSEVENLNYNQNDL
                     IYEITDKPFNRTYSEWTAKWWQWAYSIPKDHHPAYDHTGEFCSEKQKDPVWFFPGTFE
                     HPVTRYCNIQAGNAILFPILNSECSYREFPQLKNERELRDCAKIIQDKVINLSASIDN
                     NELKNLEEYRIQSSLFNFSLPQNNILGLPQQKTQAVSDGNWVFLKPLSTGQHEIKFKG
                     EVNKTIGASDSNFAGPIGWDYQTTYIVTIK"
     gene            complement(2596..>2863)
                     /locus_tag="VLA74_04955"
     CDS             complement(2596..>2863)
                     /locus_tag="VLA74_04955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50092.1"
                     /translation="FCNRELNQKFMKRDHILIVDKNGEIILESRVVSKDTIIVSGRFV
                     IGEEVLTITQNYILFANGKRIMHSKVNAINDSISITENGIKSNT"
BASE COUNT         1005 a          398 c          410 g         1050 t
ORIGIN      
        1 ataacatatt ctttgcagac ttgacaatat cttattgatc taaaacaata ttccataaat
       61 tactattgtt aaagtaacta ttaaatatgt ctaattttta ttatttttta gtatatatat
      121 tctattgttc ttatttataa aaactttata gttattatct cattaatctc tttgtgccac
      181 aattaaaaat tgatgctgat cttagaagta ttgctaaagg aaatgtgctt tctgatgatt
      241 ggagtagaaa aatttattct gtagatgcta gtgaatattg tttttttccg agttgcgtta
      301 ttcaagtcaa agacaaagaa gatgtttcaa atatttgtca atatgcttat tctcataacg
      361 taagcattac tggccgagga gccggtactg gactattagg acagtcactt acttcgggta
      421 tttgccttga ttttaccaaa tatatgaaca aattaattga atttgaaaat gattatgtaa
      481 ttgtggaacc aggaattgtc aaagcaatat tggacaaaga attaaagaaa aaaggtaaat
      541 ttcttcctcc tgatccttct agtggaaatt tttgtaccat tggcggtatg atagcaaata
      601 attctagtgg aatacatgcc ctgggatatg gaaatacaat cgactttcta gatggaatag
      661 aaattgtcta ttctaatggt aatatagaac ctttatttga accttataat aatacgaatg
      721 attttaaagt cagaaatagt catgttcctc caacaaataa gattaaacaa ttatttggat
      781 tattttccca ggatatttta caacatatct ccttaaaatt tccaaaggta acaaaaaatt
      841 cttgtggata tcgtatagat gccataattg ataatattgg aagatattta cctcataaaa
      901 tatttacatc atcagagtgt acattaggaa taacaactct tgctaaattt aaaattcttg
      961 atttgccact atacaaatct ataattgtga taggatttga gaatatccta aaggcagtca
     1021 aggtagttcc tataatttta acttttttcc catcagcttt agaattactt gattcttctg
     1081 tattaaatta tgaaaatatg ctctcttata ataaagcaag ttataaattc aatgacaata
     1141 aaaatggtac gcttctcttt atagaatttg atggaaataa tcttgttgat gtggaaacga
     1201 gattaagatt atgtagagaa aagttatctg cttatggaga aataatagaa ataacatcag
     1261 ataaagttag ttccgaaaaa atttgggcag ctagaaaaag tgccctcaat aatgtaatga
     1321 aattgacagt cggaagtcga aagcctataa gtttaattga agatactgtt gtcaatccaa
     1381 attatcttta tgaatataca ctttttttat tgaatgtata cgaaaagtac aaattggatt
     1441 acgtatttta tggacatgct ggaaacggaa atcttcatac tcgaccaata atagatactg
     1501 cttcaaatgt ttataaagac ctaatcgaat ctcttacagc tgatgtattt tcaaaggttt
     1561 acgagttttc tggcagtatt acggcagaac atggtgatgg gataagtaga acaaaatata
     1621 tatcacacat gtatggaagc atactttttg atatatttaa aaaaatcaaa tttatttttg
     1681 atcccacaaa tataatgaac cccggaaaaa aaattataca ataaacctat agtattatag
     1741 aaagtattca aaatatcttt tatcatttaa ttgtaacaat atatgtagtt tgataatccc
     1801 aaccaattgg acctgcaaaa ttactgtcag aagcgccaat tgttttattt acttctccct
     1861 taaattttat ctcatgttga cctgtactta ggggttttaa gaatacccaa ttaccatctg
     1921 aaactgcttg agttttttgt tgaggtaatc caagaatatt attttgagga agagaaaaat
     1981 taaataaaga tgattgaatc ctatattctt ccaaattctt taattcattg ttatcgatag
     2041 atgcagaaag attaatgact ttatcttgaa taatttttgc acaatctctt aattctcttt
     2101 catttttaag ttgaggaaat tctctatatg aacattcaga atttaaaata ggaaaaagta
     2161 tggcattacc agcttgtatg ttacaatagc gagtaactgg gtgctcaaaa gtacctggga
     2221 agaaccatac aggatctttc tgtttttcac tacagaattc tcctgtatga tcatatgctg
     2281 gatgatggtc ctttggtatt gaataagccc attgccacca ctttgcggtc cactcactat
     2341 aagttctatt aaatggttta tcagttattt catagattaa atcattttgg ttataattta
     2401 aattttctac ttcggaaaat atatctaaag ggattgtagt aataataata tatattaata
     2461 atgtcaagat tgacgatttt gttacatcta ttaaaatgaa atgtaccata aaaacaccat
     2521 tatattgaga ttataaaaat atttattttt tatactattt gtgattttaa aaggagtttc
     2581 tagttatatc atctcctagg tatttgattt aattccattt tctgttatag aaattgaatc
     2641 attaattgcg ttaactttac tatgcattat tctttttcca ttagcaaata aaatgtaatt
     2701 ctgcgtaatt gttaatactt cttcccctat tacaaatctt ccacttacaa taattgtgtc
     2761 tttacttaca actcgtgatt caagtataat ttcaccattt ttatctacaa ttaaaatatg
     2821 atcccttttc ataaattttt gattcaattc tctattacaa aat
//
LOCUS       DATIAS010000253         3470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1679832, whole genome shotgun sequence.
ACCESSION   DATIAS010000253 DATIAS010000000
VERSION     DATIAS010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679832"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..358
                     /locus_tag="VLA74_04960"
     CDS             <1..358
                     /locus_tag="VLA74_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50093.1"
                     /translation="NGTIKSIESYTKNLIDKVRYILKKRNLKASKTRISISWTLDTNE
                     MRGDKIDVFALLESKLRDYIGEVERKGTNSLDTYPSDKTTISIACSKNDYRLLSSQNN
                     SSDSIIIKANPIYEVV"
     gene            complement(476..1105)
                     /locus_tag="VLA74_04965"
     CDS             complement(476..1105)
                     /locus_tag="VLA74_04965"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSF50094.1"
                     /translation="MKITRHKKDLTQYKKSYSKNIKKNIKSSNNSISSNNNKNKKNTK
                     IAKVNNYISKTTRIGKNVKIWHFAYVGDKTIIGDNVMIGSLSHVDYNVKIGNNTRIEG
                     AVYIPPLTVIGNNVFIGPGATFTNDPYPMSPKMIGVTVEDGAIIASRAVIKPGVTIGK
                     NAVVGMGAVVTKDVPAETVVIGNPARIKYSRSEYDRKKSEWEEKEQQTS"
     gene            complement(1132..1536)
                     /locus_tag="VLA74_04970"
     CDS             complement(1132..1536)
                     /locus_tag="VLA74_04970"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HSF50095.1"
                     /translation="MKKHMLDILACPMDKNYPLDLIELHVKELENDNLRESNFKFPND
                     EKKTKKNNLTVNQEINNIRAEVNKDKDKVIVIIEGILYCRKCLRFYPIIDEIPIMLPD
                     ELREKEKDLEFLNKWKNNIPQKILKNANPWHL"
     gene            complement(1540..2622)
                     /locus_tag="VLA74_04975"
     CDS             complement(1540..2622)
                     /locus_tag="VLA74_04975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSF50096.1"
                     /translation="MDYRGMVGERIQNRDEILLELEKERKEEEEKSKLRISKKGEQDN
                     NTVKIGIIGVGGWGKNHSRVLHDFGVLTSICDMDKTKAQDLANRYNVNYYCSIEDMIN
                     FENLDACLVCTPTKTHYQVSKKLMENGINVFVEKPLSYSSKECEEMIQIAKKNKVTMT
                     CGYIERFNPAVQDVKKIISEETYGELLMIEFHRENRMPLHIKDVGIIYDTAVHDIDTA
                     IYLFGKKPQFVFARAGKIFHSFEDFSNIMLGFRKDKVAVISSNWITPKKVRKFSAVCT
                     DGIINGDFIKQEITIEDSNSTTIPRRSSLVEPLSLELKSFIEVIEGKREQPEVSPEEA
                     TNVTKIAEAALLSSNTGAPIYLNLDE"
     gene            complement(2601..>3470)
                     /locus_tag="VLA74_04980"
     CDS             complement(2601..>3470)
                     /locus_tag="VLA74_04980"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HSF50097.1"
                     /translation="EKALIPINTHALHYGTSIFEGIRAYSSSNNLHVFKLKEHMERLF
                     RSASFYSIKINYTLDDLINSTIQLLRKVNMRESCYIRPISFVGVHGIDLNVNYESPTH
                     TVIIVFPFQKYFKTEGIRVGVSSWRRIHESSTPTIAKAGGNYLNSILATQECKRHGYD
                     EAIMLDRDGNVSEAPGENIFVIKNKTIYTPNIDSSILEGITRDTVITLARDLGYTIVE
                     RTISRSELYTAEEVFLTGTAAEIIGVISVDGKNIGDGKEGQITKTIKNIYHEIATCKN
                     SNKKYRGWTTEVW"
BASE COUNT         1046 a          584 c          444 g         1396 t
ORIGIN      
        1 taatggtaca atcaaaagca tagagagtta tacaaaaaat cttattgaca aagtaagata
       61 tattttaaag aaaagaaatc taaaagcaag taaaactaga atatcaattt catggacttt
      121 agataccaat gaaatgagag gcgataaaat agatgtattt gcacttttag aatcaaagtt
      181 acgggactac ataggagaag tagaaagaaa aggaacaaat tctcttgata cttatcccag
      241 tgataaaact acaatttcta ttgcctgttc caaaaatgat tatcgtttac tatcatcaca
      301 aaataatagt tctgactcaa ttatcattaa agcaaatcct atttatgaag tagtataaga
      361 taataaaatt attttatatt atatatgaat tagttaattc atatatgtag tttgatttga
      421 taattttgta tattattaaa tcttaaggat aatttacccc tttaataata tgtctctagc
      481 ttgtttgttg ttctttttct tcccactctg atttctttcg atcatattca cttctagaat
      541 attttattct agcaggattt ccaataacca ctgtttctgc tggtacatct tttgttacta
      601 ctgcacccat acctacaact gcattcttac cgatagtgac acctggtttt attactgctc
      661 gggaagcaat tattgctcca tcctctactg ttactcctat catttttgga ctcataggat
      721 atggatcatt agtaaatgtt gcaccaggac caatgaatac attgtttcct attacagtta
      781 acggtggaat atatactgct ccctcaattc tcgtattatt tccaatttta acattataat
      841 caacatgaga aagagatcca atcataacat tatctccaat tatggtctta tctccaacat
      901 aggcaaaatg ccatatcttg acattttttc caattcttgt agtcttagat atgtaattat
      961 ttactttggc aattttagta ttcttcttat tcttattatt attgctacta atgctgttat
     1021 tactgctttt aatattcttt ttgatatttt ttgaataact ttttttatac tgagttagat
     1081 cttttttatg tcttgttatt ttcattttat tttatagtaa atgttattaa cctataaatg
     1141 ccacggattt gcattcttta atattttttg tgggatatta tttttccatt tatttaaaaa
     1201 ttctaaatcc ttttcttttt ctcttaattc atctggtagc atgataggaa tctcatcgat
     1261 aatcggataa aaacgcaaac attttctaca atataagatt ccttcaatta tgacaataac
     1321 tttatcttta tctttattta cctctgctct aatattatta atctcttgat tgaccgtgag
     1381 attattcttt ttggtttttt tttcgtcatt tggaaattta aaattacttt ctcttaaatt
     1441 gtcattttcc aattctttta catgtaattc tattagatct agtggatagt ttttgtccat
     1501 aggacaagct aatatatcta acatatgttt tttcaatttc tattcatcta aattaagata
     1561 aattggagcg cctgtattac tagataatag tgcggcttct gcaatctttg ttacatttgt
     1621 ggcttcttct ggagatactt ctggttgttc cctcttgcct tcaataactt ctataaaact
     1681 ttttaattcc aatgaaagag gttcaactaa acttgatctt ctaggaatag ttgttgagtt
     1741 agaatcttcg atagttatct cttgctttat gaaatcgcca ttgattattc catcagtaca
     1801 tacagcacta aattttctaa cttttttggg tgtgatccaa ttggaagaaa ttactgccac
     1861 tttgtctttt ctaaatccta gcataatatt agaaaaatct tcaaaagaat gaaagatctt
     1921 tcctgctctt gcaaatacaa actggggttt tttaccaaat aggtatatgg cagtatctat
     1981 atcatggact gccgtatcgt atattattcc tacatctttg atatgtaaag gcattctatt
     2041 ctctctatga aattcaatca ttaatagttc tccataagtt tcctcagaaa ttattttttt
     2101 tacatcttga acagctggat taaatctttc aatatatccg catgtcattg ttactttgtt
     2161 tttctttgct atttgtatca tttcttcaca ttctttggat gaataagata atggtttttc
     2221 aacaaaaaca tttattccat tttccatcaa tttttttgaa acttggtaat gtgtcttagt
     2281 aggagtacat actaagcaag catctaagtt ttcaaaattg atcatatctt ctattgaaca
     2341 ataataattt acattatatc tgtttgcaag atcttgcgct tttgttttat ccatatcaca
     2401 tatcgatgtt aatacaccaa aatcatgaag tactctggaa tgattttttc cccatcctcc
     2461 tactccaatg atgccaatct ttaccgtatt attatcctgt tctccttttt tactgatcct
     2521 taactttgat ttttcttctt cttcttttct ttctttttct aattcaagaa gtatttcatc
     2581 tctattttga attctttctc ctaccatacc tcggtagtcc atcctctata tttcttatta
     2641 ctatttttac atgtagctat ttcatggtaa atatttttta ttgttttagt tatttgacct
     2701 tcttttccat ctcctatatt ttttccatca acactgataa ctccgataat ttctgcagct
     2761 gttccagtta gaaaaacctc ttctgcggta taaagttcag atcgagatat tgttctttca
     2821 acaatagtat aaccaaggtc tcgcgcaagt gtaattactg tatctctcgt aattccttca
     2881 agaattgatg aatctatatt gggggtatag atggttttat ttttaatcac aaagatattt
     2941 tcaccaggag cttcacttac atttccatct ctatcaagca ttatagcttc atcataacca
     3001 tgtcttttac attcctgtgt tgctagaata gagttaaggt aatttcctcc agcctttgca
     3061 atagtaggag tagaagattc atgaattctc ctccatgatg aaactccaac cctgatacct
     3121 tcagttttaa aatatttttg aaaaggaaat actattatta ctgtatgagt tggagattca
     3181 taatttacat ttagatctat accatgtact cctacaaatg aaatgggtct aatgtaacat
     3241 gattccctca tgtttacctt gcgtagcaac tgaattgtac tattaattaa atcgtcaaga
     3301 gtataattaa ttttaataga ataaaatgaa gcggagcgaa ataacctttc catatgttct
     3361 tttaatttaa atacatgtaa attattacta gagctgtaag ctctaattcc ttcgaaaatt
     3421 gaagtaccgt aatgtaatgc atgggtgtta attggaatta atgctttttc
//
LOCUS       DATIAS010000254         7246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_999614, whole genome shotgun sequence.
ACCESSION   DATIAS010000254 DATIAS010000000
VERSION     DATIAS010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7246
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999614"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(448..948)
                     /locus_tag="VLA74_04985"
     CDS             complement(448..948)
                     /locus_tag="VLA74_04985"
                     /inference="COORDINATES: protein motif:HMM:NF014037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HSF50098.1"
                     /translation="MNEYSFIADAMLGKIARKLRMFGYDTVYESNAKDDYFIFPEVHT
                     NRIILTSDKELFNRCRKKSFSIILLNKKTEFENLVTIFLSLKVKYINPNLSFSRCTIC
                     NGLLGVVDNDNIFFDANHKLPKLNNIKEFYQCKICKKIYWKGSHVNNMLDLIKKINIE
                     LSSQKK"
     gene            complement(1174..1440)
                     /locus_tag="VLA74_04990"
     CDS             complement(1174..1440)
                     /locus_tag="VLA74_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50099.1"
                     /translation="MDSEIQSGYGSEVIGDLEYCCEALEKNFWLELMDPEYYENDNPR
                     KIKEPKIVLGFANYSGGYTIVGGEDGIKFCPFCGEKIVLELVER"
     gene            1897..3345
                     /locus_tag="VLA74_04995"
     CDS             1897..3345
                     /locus_tag="VLA74_04995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50100.1"
                     /translation="MSLEFKKMIEIILKQLPEITAEEIRDLIDEKKRKIGAGYLTDQG
                     ALFLVASDLGISFDSAQDVQTYIKDLYIGANDVNLIARIINVYPIKRYTRRDTNEEIQ
                     TRTLTIYDSFSSIKLRLWDNHVNFPENEKLKPGDIIKVSHGYVKSGLDNKPIINLGTR
                     GILETIKDDTDIPSIDQRTKNIEEIREPIENIVVTGYISSNPRISRYTNFRNEPGKSL
                     QVILSNEDKSRSLRSVIWNINEDKIPDIFISGSKIKLTGVRIKQGNPQYSGEELEIHG
                     DEATIIEIIDSEEKVEEGKVVILKIISNSNREDTLNENYLAIDKNRNFVSVVIDRKII
                     NEEIIANTIIEGIPNKVFGNIFYFTDEDSFIRIIDDKYESFPDELELESKIKNIEISD
                     KPYIIEAIVLQSPNTSEITTKSGENVTVSDTLIGDDTGEIRLTGWREQTRLISKLVVG
                     NRIKVIGAVAGMGRENKIEITLKGFSEIRKIN"
     gene            complement(3352..6162)
                     /locus_tag="VLA74_05000"
     CDS             complement(3352..6162)
                     /locus_tag="VLA74_05000"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSF50101.1"
                     /translation="MKNLIHNQNRRNQQVISNKFSPSKAEFEHIEKIITSQYYDYGFS
                     SLTRIQNLALKVIVRDYNCLLVAPTGSGKTEAALLPVIKLLSLFKGEAGIKVIYVTPL
                     RSLNNDVLRRIIRYADTEKLTVEIRHGDTPAKTKKKITHNPPDILITTPESIPILLTI
                     ENLLKAFQSLKWVIIDEVHELVSNERGSHLSLSLERLQQHSRNIITRIGLSATLGNVK
                     ETGKFLVGSNQKCAILQDRSVREYDLKIKFVNGSIYNVAKFIVEYIKTNNISGSVLLF
                     TNTRDEAEYFGTILKTQKEVNVDVHHGSLSKEIREDAEYKLRTGAAGIVVCTSSLELG
                     LDIGSVDLVIHYGSPRQVSKLMQRIGRSRHQNRRSAKGLIVTNIPDDEVESIGLIRRM
                     RNRSVEQQSIHLKSLDVLSHHLVGLTLERRDDVSVDKAFSIVTRAYPFLNLSTCTLES
                     CLDLLDRNKIIMYNRETNAFRRRIKSYKYYFENISMIPYILKFQVIDIISKKRIGTLD
                     QKFVGDYGEKGNVFVLKGTQWRVISINESKFEVNVEPLYGAKINVPHWVGELIPVDYY
                     TAEEVGKVRNLIVGKKIGADNSVIDNFFNTFNLVPDTKKIVVESSDTQNQIVIHSTFG
                     TKVNNTFSSLFSTIISSKLGYIVETRSDPYRILLTSSARITKFHIQSVFDGDYDIESI
                     LIASLNNTYLLNWKVWMVAKRLGIISKEALYDKKIARLIYDRYAKTPLSEESIRELVH
                     EKYDILLTRQVLNAFKKQIINLHWVRISDFSELAKPILDHSTKFSSAPTSIETGVIEL
                     IKERLDKTKQKLICIRCGKWERTFTVHETPSNIVCIYCKSRLITLTSWYDNDLKKIIL
                     KKIERKMLKEDESHKFERAWKISSLINNFGKKAVLVLAGHGIGADTAARILRDYVDDE
                     EIFRQIYKAERQYVMTRGFWDN"
     gene            6333..6881
                     /locus_tag="VLA74_05005"
     CDS             6333..6881
                     /locus_tag="VLA74_05005"
                     /inference="COORDINATES: protein motif:HMM:NF014610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50102.1"
                     /translation="MRPAHNKSSEFIKKISKDKKTKLKAVALLSGGLDSNLAIRMIQE
                     QGVEVEAISIKTPFCDFDCGKGCGHRVQEVAEELGVSLKTVYFGREYLKMLKNPKYGY
                     GSGMNPCIDCRSMMYMAAKDHMKKIDADFIITGEVLGQRPMSQNSNALRIIEKETRTN
                     GLIVRPLSFKKLPVTQAEKDGC"
BASE COUNT         2516 a         1157 c         1168 g         2405 t
ORIGIN      
        1 tccatgattt caaatattct ttatactaat caaattttat tacataatgc attttttact
       61 cctaatgaga tagttttaat aatcagtgaa ggggatgcgg caaaggctta tgaactgtta
      121 cgaatcaaat tatacaaata agaaatgatc gtaaacgatc cctgtgataa tcgttattat
      181 atagaaatat atttaatgta gtagataatc tacttttgat ttggcacata atttttccca
      241 taatttacat gtttatacct agatatgcat attcatctct tatgaagatg agataaaaat
      301 tgttagcacg gtttccttat actatgtttt tagcagctgg aacaattgtg gattaaataa
      361 taaataccta aaaaaagtaa taaccataaa tatgaaaaac taattaggca atacgaacaa
      421 atagttcaca tgaaaagagc tgtcgcatta ctttttttga cttgaaagtt ctatatttat
      481 ttttttaatt aaatctagca tattattcac atgacttcct ttccagtaaa tttttttaca
      541 gattttacac tggtaaaatt ctttaatatt atttaattta ggtaatttat gatttgcatc
      601 aaaaaaaata ttatcattat caacaacacc taataaacca ttacaaattg tacagcggga
      661 aaaagaaagg tttggattta tatattttac ttttaaggat aaaaaaattg ttactaaatt
      721 ttcaaattca gttttcttat taagcaaaat tatgctaaaa ctttttttcc tacatctatt
      781 aaacaattct ttgtcacttg ttaaaattat tctattagta tgaacttctg gaaatataaa
      841 ataatcatct tttgcattcg attcatagac ggtatcataa ccaaacatcc ttaattttct
      901 tgcaatttta cctaacatcg catcagctat gaaagagtat tcgttcacat ttgccgtatt
      961 acatatttat gagaagtcga tataaataat atcttttaaa aaattcatat tcatttgtaa
     1021 gtcattaaaa cctcaataag aaaatcaaat agttcagatt tatgcaaaaa tctattcaaa
     1081 catcaattat tattatatgt gttgtttaag aatattttta atattatcag atgagaattt
     1141 tcagattgtt gtaatagtga tttttaataa ttcttatcgt tctactaatt ctaaaacaat
     1201 tttttcgcca caaaacggac aaaatttaat tccatcttca ccacctacaa ttgtataacc
     1261 gccagagtaa tttgcaaacc caagaactat ctttggctcc tttattttcc tcggattgtc
     1321 attttcataa tattctggat ccatcaattc taaccagaaa tttttttcta aagcttcaca
     1381 acaatattct agatctccta ttacctcact accataacct gattgaattt cagaatccat
     1441 attaccgttt tcattataaa catagttaat ttcaggctcc acaaaataac gaattatcat
     1501 aactatagaa tatttattct cttaataaaa atgataggtt gataatatga ttagttcgca
     1561 tatctttgat cattagatca gtcgaagttt gtgcaaaaac atttggtaag aaaaccagag
     1621 atattataaa tatgatgaga gtcttcatat tattattgta ttaatttatt taaagttttg
     1681 accaaagata taatccagtt gaactgttaa tagttatcca gaaatagtaa atttaatgct
     1741 tttaaatatt taattgattt aagaatgatt taaaagcaaa aaaaatgttt tttattcgat
     1801 aattcaattc aagaatatct aaaaaataaa tgttatcaat ttgcaatgga ttaaaacata
     1861 taggatagtg atatagtata aaatgataga tatactttgt cactagaatt taagaaaatg
     1921 atcgaaatta ttctcaagca gctgccagaa ataactgctg aagaaataag agatctaata
     1981 gatgagaaga aaagaaaaat cggtgctggt tacttgacgg accaaggcgc attatttctg
     2041 gtagcatcgg atcttggtat atcatttgat agtgcacaag atgttcaaac ctatataaag
     2101 gacctttaca taggagcaaa cgatgttaac cttattgcaa gaataataaa tgtatatcca
     2161 attaagagat atacaagaag agacacaaat gaggaaatac agactagaac attaacaatc
     2221 tatgatagct tttcatccat taaattgaga ctatgggata atcatgttaa ttttcctgaa
     2281 aatgagaaac taaaacctgg tgacatcata aaagtttcac atggttatgt taagtccggc
     2341 ttagataaca agcccatcat aaatttaggt acaagaggca tattagagac aattaaagat
     2401 gatacagata tcccatcaat tgaccaacga accaaaaata ttgaagaaat acgagaaccc
     2461 atagaaaata tcgtagtaac tggatacata tcatccaatc caagaatatc aagatacact
     2521 aactttagga atgaacctgg caaatcatta caagtgatat tatcaaatga agataaaagt
     2581 agatctcttc gaagcgttat ttggaacata aacgaagata aaattcctga tatttttatc
     2641 agtggttcta aaataaaatt aacaggagta agaatcaaac aaggaaatcc tcaatatagc
     2701 ggagaagaat tagagataca tggagacgaa gctaccataa tagagatcat tgattcagag
     2761 gagaaagtag aagagggaaa ggtagtaatt ttgaaaatca tctcaaattc gaacagagaa
     2821 gacaccctaa atgaaaacta cctggctata gacaaaaata ggaattttgt ttctgtagtg
     2881 atagatcgta aaataattaa tgaagaaata atcgctaata caattattga aggaatacct
     2941 aataaggtat ttggaaatat tttttatttt accgatgaag attcatttat tagaattata
     3001 gatgacaagt acgagtcttt ccctgatgaa ctagagctag aatcaaaaat taagaatata
     3061 gaaatttctg ataaacctta cataatagaa gcaattgttt tacaatctcc caatacgtca
     3121 gagataacaa caaaaagtgg agaaaatgtt acagtaagtg atacccttat aggagacgat
     3181 actggagaaa ttagattaac aggctggaga gagcagactc gcctaatttc aaaactggtt
     3241 gtgggcaata gaattaaagt tattggagca gttgcaggaa tgggaagaga gaataaaatt
     3301 gaaataacgt taaaaggatt ttctgaaatt agaaaaataa attaaaaatg gctaattgtc
     3361 ccaaaatcct cttgtcatta cgtattgtcg ttctgccttg tatatttgtc tgaatatttc
     3421 ttcatcatct acataatcac gcaggattct cgccgctgta tcagcaccga ttccatgccc
     3481 tgcaagtact aatacagctt tttttccaaa attatttatc aaagaagata ttttccatgc
     3541 acgttcaaac ttatgagatt cgtcctcctt taacatcttt ctttcaattt tttttaatat
     3601 tatttttttg aggtcgttat cataccaaga agtaagtgtt atgagtcgag atttgcaata
     3661 aatgcatacg atatttgaag gagtctcatg gacagtaaat gtacgttccc attttccgca
     3721 tcgtatacat ataagttttt gtttcgtctt gtcaagtctt tcttttataa gttctataac
     3781 accggtctca atagatgtag gggctgagga aaatttagtt gaatgatcaa ggattggttt
     3841 agctagttct gagaaatccg atattctaac ccaatgcaaa ttgataattt gttttttaaa
     3901 agcgtttaat acttgtcttg ttagtaggat atcatatttt tcatgaacta attctctgat
     3961 cgactcttca cttagtggtg ttttagcgta tctatcataa atcaaccttg caattttttt
     4021 atcatatagt gcctctttgc taattatacc aagtcttttc gctaccatcc acactttcca
     4081 atttaaaaga taagtattat ttagcgacgc gatcaggatt gattcaatat cgtaatcacc
     4141 atcaaataca gattgaatgt gaaatttagt aattcttgca gaagatgtta aaagaattct
     4201 atatggatca cttcgagttt ctactatata tcctaatttc gatgaaataa ttgtagaaaa
     4261 taaggatgag aaggtattat ttacttttgt accgaatgtg gaatgaatga caatttgatt
     4321 ttgagtatca gaactttcta ctacgatttt cttggtgtct ggaacaagat tgaatgtgtt
     4381 gaaaaaatta tctattactg aattgtctgc acctattttt tttcccacta tcaagtttct
     4441 gacttttccc acttcttcag cggtgtaata atcaactgga attaattcac ctacccagtg
     4501 cggaacatta atcttagctc catataatgg ttcaacgttg acctcaaatt tcgattcgtt
     4561 aattgatatg accctccatt gggtaccttt gagtacaaat acatttcctt tctctccata
     4621 atcacccacg aatttttgat ccaatgttcc tatccttttt ttactaataa tatctataac
     4681 ttgaaacttg agaatataag gaatcatgga tatattttca aagtaatatt tatatgattt
     4741 gatcctacgt ctaaaagcat tagtttctct attatacatt attattttat ttctatcaag
     4801 aagatccaag caggattcaa gagtacatgt tgaaagatta aggaaaggat atgctcttgt
     4861 cacaatagaa aaagctttgt caacactaac gtcatccctt ctttctaacg tcaatcctac
     4921 caaatgatgg gacagaacat caagagactt gagatgtatt gattgttgtt caacagatct
     4981 atttcgcatt cttctaatta atccaataga ctcaacttca tcatcaggaa tattagtaac
     5041 aatcaatcct ttagctgaac gtcggttttg atgacgactt ctaccaattc tttgcattaa
     5101 ttttgaaact tgtctgggag aaccataatg gattaccaga tcaacagaac caatatccaa
     5161 acctaattct aatgaagagg tacatacgac tattcccgca gcaccggttc ttaatttgta
     5221 ttcagcatct tcgcgaattt cttttgataa agaaccatgg tgtacgtcta cattaacttc
     5281 cttttgagtc ttaagaatgg tcccgaaata ttcagcttcg tcccttgtgt ttgtaaatag
     5341 aagaacggaa cctgaaatat tattcgtctt tatatattct acaataaatt tggctacatt
     5401 ataaatggaa ccgttcacaa attttatctt gagatcatat tctctcacag atcgatcttg
     5461 aagaattgca catttttgat tcgatccgac aagaaactta cctgtttctt ttacatttcc
     5521 caatgttgct gataatccta ttcttgttat aatattcctg gaatgttgct gcaatctttc
     5581 aagcgacaga gacaaatgag aacctcgttc attggaaacc aattcatgga cctcatcaat
     5641 aataacccat tttaaggatt gaaaagcttt taacagattc tcgatagtta aaagtattgg
     5701 aatcgattca ggcgtagtta tcaagatatc tggaggatta tgagttattt tctttttcgt
     5761 tttggctggg gtgtcaccgt gtcttatttc gacagttaat ttctctgtgt cagcatatcg
     5821 aattattcta cgcaaaacat cattattaag agatcttaag ggggtcacat aaattacttt
     5881 gatccctgct tctcctttaa ataaagaaag caatttaatt acaggtaata gtgcagcttc
     5941 tgtttttcct gatccagttg gtgctactaa gaggcaatta taatctctga ctatcacctt
     6001 taaagctaag ttttgtatac gagtaagcga actaaaccca taatcataat attgactggt
     6061 tatgattttt tcaatatgtt caaattcagc cttcgatgga ctaaacttat tactgatgac
     6121 ctgttgattt ctcctgtttt gattgtgaat tagatttttc ataaaccatt atcgaaaata
     6181 gaccagcgat gaataaacct actgcgatcc acacgtagga atcgaaattg ggtattgatt
     6241 ctagaaccat aattcattta ttaatttctg tcattaatat attttatatt atttacttaa
     6301 caataaatat agattaataa ttgaagaagt taatgaggcc tgcccataac aaatcgagtg
     6361 aatttataaa gaaaatatct aaagacaaaa aaacaaagtt gaaggcggta gcattgttat
     6421 ctggtgggtt ggatagtaat ttagcaataa gaatgataca agagcaaggg gtagaagttg
     6481 aagctatatc tatcaaaaca ccattttgtg attttgactg tggaaaaggt tgtggccatc
     6541 gggttcaaga ggttgccgaa gaattgggag taagtctgaa aactgtttat tttggtcgag
     6601 aatatctgaa gatgttaaag aatcccaaat atggttatgg ttcaggaatg aatccttgca
     6661 ttgattgcag gagtatgatg tatatggcag ctaaagatca tatgaaaaaa atagatgcgg
     6721 attttatcat tactggtgag gttctgggtc aaagaccaat gagtcaaaat agtaatgctt
     6781 taagaattat cgaaaaggaa acacgtacta atggattgat agtaagacca ctatcattta
     6841 aaaaattacc tgttacacaa gcggaaaaag atgggtgttg atggttacct gcttgaactc
     6901 agatcgccac gtgatcgcat gcgcgacagt tattacccac tgcggagcaa tcagcacgcc
     6961 gtgcccctca ccgggcaagt caacgagcgc gggaaactca gacgccggaa tccgatactt
     7021 cgagtcatca acgtcatccc gaatgacgac ggcactggcg gttgatgacg ccgcgaggag
     7081 gatgagcaac aagaatctat tcatgtgtga tgtcttcatg cgtgatgtct tcattgggcc
     7141 aacgcttgta ttgatccgac ccgcaacgcg cgaacggagt ggcaggaatc caccccacca
     7201 gggaagcgac ggagcgagat cggctttggt gaaccgttag cttcta
//
LOCUS       DATIAS010000255         4598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1271416, whole genome shotgun sequence.
ACCESSION   DATIAS010000255 DATIAS010000000
VERSION     DATIAS010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4598
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271416"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(212..580)
                     /locus_tag="VLA74_05010"
     CDS             complement(212..580)
                     /locus_tag="VLA74_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50103.1"
                     /translation="MLISLAVASITTYLVYIGLIDSLTRSSVNYTSISNDTAISLIVK
                     QNNLTSEHIDKVLSKYVYVKGNGEIYDSKKDTNFIGNYIGKTSPTVTTGNHFGWEIYF
                     PIINKTYYIDHLTGEAISKK"
     gene            673..1158
                     /locus_tag="VLA74_05015"
     CDS             673..1158
                     /locus_tag="VLA74_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSF50104.1"
                     /translation="MITITEKLFALGYELPPPPKPAGAYLPLIEVNDLIYISGQIPFD
                     TNSDPPIVKYKGKIGFDTTIEKGQDAAILCTLNALSLLKDYLGSLDKIKQIVKVSAYI
                     NSVEIFKDHPQVINPASNLLEKLFDKKGKHSRVTIGVTSLPLNSTIEIEFIIQVKHIP
                     S"
     gene            1247..1702
                     /locus_tag="VLA74_05020"
     CDS             1247..1702
                     /locus_tag="VLA74_05020"
                     /inference="COORDINATES: protein motif:HMM:NF003269.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15e"
                     /protein_id="HSF50105.1"
                     /translation="MYKQMAKTWITMWKTNSDELKSRAIGWRKELAIHRINKPSRLDR
                     ARKLGYKAKQGIVVIRARVGRGGMRKQRPVAGRRPKHSGVIRIKQATNMRLVAERRVN
                     EKYPNMEIIGSYFLYKDGKHSWYEVILADPSHPTIYKDKEMRGKLKALT"
     gene            complement(1744..2142)
                     /locus_tag="VLA74_05025"
     CDS             complement(1744..2142)
                     /locus_tag="VLA74_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HSF50106.1"
                     /translation="MYIMAENSFKMNSQYKLRCKKILEISPKIRYAGITNKFGRTIAG
                     QLRIGIVPLLKPEEMKNELFVHSMIYNIRRSYENSVGGTQFIMIASSNVDIVSFHIKD
                     FIYYITLEKNIEKNEIYSLIEKAQSVAQSN"
     gene            complement(2203..2868)
                     /locus_tag="VLA74_05030"
     CDS             complement(2203..2868)
                     /locus_tag="VLA74_05030"
                     /inference="COORDINATES: protein motif:HMM:NF019429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfuA-like protein"
                     /protein_id="HSF50107.1"
                     /translation="MNLPIVFLGPSLKLDKAKKIINAEFKPPAKKGDFIKLSLTSETR
                     KVVLIDGVFLQDYPPTPIEVFQVISKSNFKVYGSSSIGALRAVELEKFGMKGIGKIFE
                     LYKKDIINSDDEIAVTFDSDYNLLSEAMIDIRYNIFLAWKHQIIDKETKQIMTKLAKR
                     IYFPYRSYDNIIEKSLDLFPSQRKFILKFKEYILSNRVSLKEIDALTTLKYISSLTGK
                     IHE"
     gene            complement(2865..4139)
                     /locus_tag="VLA74_05035"
     CDS             complement(2865..4139)
                     /locus_tag="VLA74_05035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HSF50108.1"
                     /translation="MNGTSRIIPVEKTLLHVSEIAKKIGLTRIADITYMDKLYIPNYS
                     SVLPGTEDYIWVYSGKGPTKQHAKASAIMESIERFSSLPTSYTKKFVSGTYNQLKHSY
                     NILHPYEVIEPLSFDFQDDMFMDYVNGFDIINSENILVPAGLALFRYNPHSPSINPFA
                     FHHTNGLASGNVLEEAVCHALSEVIERDAISLAQLRASAIPFHILSNVFNNLQRQGYP
                     LKPFSKYTFQDDYTIFPDVLLSHIDFNPVIELIKKFEKFNIKLIIKDVTTNIKIPTFN
                     VACVEWISHDYGYLAEGHGTHPDKRIALLRAITEVSQTRVANIHGARDDLRKIKYNDN
                     NTDDKNAWQFMASKKTINFSEILTYQNEDILDDINIIVKCLKEAGLKKAIVVDLTNPN
                     IKIPVVRAIIPGLETFMISKSIMGWRARKFYK"
     gene            4255..4431
                     /locus_tag="VLA74_05040"
     CDS             4255..4431
                     /locus_tag="VLA74_05040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50109.1"
                     /translation="MISRQKEAEIISEILLKAASEAEFRNSLIKDPTAILERYNISNE
                     AKYIIRKSIIDLTQ"
BASE COUNT         1627 a          680 c          635 g         1656 t
ORIGIN      
        1 aattaattct gatttagtta ttgatggttt atccataaca ttaagaccgg ctttttttaa
       61 aatggttatt ccaacagatg aaattgggtc acagattaaa atatttcctt gtacatgcac
      121 agataaaatt tttttaaata caaatataat tattacttta taattgaaaa aatcattctg
      181 tgatatttag aataaaaata gaatctttct tctacttctt tgaaatagct tctcctgtta
      241 aatgatcaat gtaataggtt ttatttatta tcggaaaata aatttcccat ccaaaatgat
      301 ttccagttgt taccgttgga gaagtttttc ctatataatt gcctataaaa tttgtatcct
      361 ttttagaatc atatatttca ccatttcctt ttacatatac atattttgaa agtactttat
      421 caatatgttc agatgttaaa ttattttgtt taacaataag agaaattgct gtatcgttag
      481 aaatagatgt ataattaaca gaagatcgag tcaatgaatc gattaaacca atataaacca
      541 aataggtagt tattgaggct acagctaatg atattaacaa ttttttatac atataaaaat
      601 caataatttt ttttattatt tatgttaata tgttataata catttaataa tactttttct
      661 ttaagttctc tattgataac tattacagaa aagttatttg cattaggtta tgaactgcct
      721 ccaccaccaa aacctgcagg tgcttattta ccattgattg aagtaaatga tctgatctat
      781 atttcaggac aaattccttt tgatacaaat tcagaccctc ccatagtcaa atataaagga
      841 aaaataggat ttgatacaac tattgaaaaa ggtcaagatg cagcaatact gtgtactcta
      901 aatgcacttt ctttattaaa ggactatctt ggaagtcttg ataaaattaa acaaatagta
      961 aaagtttctg catatataaa ttcagtagag atatttaaag atcatccaca ggttataaat
     1021 ccagcgtcaa accttttgga aaagttattt gataaaaaag gaaaacattc acgtgtaaca
     1081 ataggagtta caagtcttcc attaaatagc actatagaaa tagaatttat cattcaagtt
     1141 aaacatatcc catcttaatt ttgaacaaag ataatattag caaaacctta tttttttaaa
     1201 ggaaattttt atataccctt ttgaaagcat ctgtttatat tttaaaatgt acaaacagat
     1261 ggcgaaaact tggattacaa tgtggaagac taatagcgat gaattaaagt ctcgagctat
     1321 tggttggaga aaggaattag caattcatag aattaataaa cccagtcgac tagatagagc
     1381 aagaaaatta ggctataaag ccaaacaggg gattgtagtt attagagcca gagtaggcag
     1441 aggtggtatg agaaagcaga gaccagtagc tgggcgtaga cctaaacata gcggtgtcat
     1501 tagaattaaa caagcaacaa atatgaggtt agtagcagaa agaagagtaa atgaaaagta
     1561 tccaaatatg gaaataattg ggtcatattt tctatacaaa gatggtaaac attcatggta
     1621 tgaggttatt ttagcagatc catcacatcc aacaatttac aaagacaagg aaatgagggg
     1681 aaaattaaaa gccctaactt agttattatt ctttaaaaaa atttataaaa aataattagt
     1741 tagttagttc gattgtgcga cactttgagc tttttctatt aatgagtata tttcattttt
     1801 ctctatgttc ttctctagag taatataata tataaaatct ttaatatgaa aactaacaat
     1861 atccacattt gaacttgcaa tcataataaa ttgtgtacct ccaactgaat tttcatagct
     1921 tcttctaata ttatatatca tagaatgaac aaataattca tttttcatct cttcaggttt
     1981 taataaagga acgataccaa ttctgagctg acctgcaata gttcttccaa atttatttgt
     2041 tataccagca taacgaattt ttggtgaaat ttctaaaatt ttcttacatc tcaatttata
     2101 ttgtgaattc attttaaagg aattttcagc catgatatac attttatgaa tcgatataaa
     2161 acagtttagg ggaattatta ttgtaaagtt aaaaatcaaa acttattcat gtatttttcc
     2221 tgttaaagaa gagatatatt ttagtgttgt cagagcatct atctctttga ggcttactct
     2281 attactcaaa atatattcct taaatttcag aataaatttt ctttgagagg gaaaaagatc
     2341 taaagatttc tcaataatat tatcataact acggtaaggg aagtagatcc tttttgctaa
     2401 ctttgtcata atttgctttg tttctttatc aattatttga tgtttccaag ccaaaaatat
     2461 attatatctg atatctatca ttgcctcaga aagaagatta taatcagaat caaaggttac
     2521 ggcgatttca tcatctgaat ttataatatc ttttttatat aattcaaaaa tttttccaat
     2581 tcccttcatt ccaaattttt ctaattctac agcacgtaat gctccaatac tagatgaacc
     2641 ataaaccttg aaattgcttt tagagataac ttgaaatact tctataggtg ttggaggata
     2701 atcctgaaga aaaactccat ctattaaaac gacttttcga gtttcagacg ttaggcttaa
     2761 ttttataaag tcgccttttt ttgcaggagg cttaaattct gcattgataa ttttttttgc
     2821 tttgtctaat tttaaagatg gccctaaaaa cacaatcggt aaattcattt ataaaatttc
     2881 cttgctctcc aacccataat agatttggat atcataaatg tctctaaacc aggaattata
     2941 gctctcacta cgggaatttt tatatttgga tttgttaaat ctactactat agctttcttc
     3001 aatcctgctt ctttaagaca tttgacaatg atattaatat catctaaaat atcctcattt
     3061 tgatacgtga gtatctcaga aaaattaatt gtctttttcg aagccataaa ttgccatgca
     3121 tttttatcat cagtattatt atcattatac tttatttttc gaaggtcatc tctagcccca
     3181 tgaatatttg ctactcttgt ttgagaaact tcagttatag ctcttaataa tgcaattctt
     3241 ttatctggat gggtaccatg tccttcggcc aaataaccat aatcatggga tatccattct
     3301 acacaagcaa cattaaaagt agggatttta atatttgtag taacatcttt aataatcaat
     3361 ttaatattaa atttttcaaa cttttttatc aattctatta ctggattaaa atctatgtga
     3421 gaaagcaaaa catcgggaaa tatagtataa tcatcttgaa acgtatattt tgagaatggt
     3481 tttaatggat atccttgtct ttgtaaatta ttaaatacgt ttgacaagat atggaatgga
     3541 attgcacttg cacgcaattg agccaaactt attgcatctc tttcaattac ttcagacaat
     3601 gcatgacaaa ctgcttcctc caaaacattt cctgatgcta aaccatttgt atgatggaat
     3661 gcaaaaggat tgatagaagg cgaatgagga ttataacgaa ataatgctaa tccagcagga
     3721 accaaaatat tctcactatt aattatatca aaaccattaa cataatccat aaacatatca
     3781 tcttgaaaat caaaagaaag aggttctatt acttcataag gatgaagaat attatatgaa
     3841 tgttttaatt gattatatgt tccactaaca aattttttag tataagatgt tggtaaggat
     3901 gaaaatcgtt ctatgctttc cataattgca cttgcctttg catgctgttt tgttgggcct
     3961 tttccgctat atacccatat ataatcttct gttccaggta aaactgaaga ataatttggg
     4021 atatataact tatccatata agttatatca gcaattctgg taagccctat ttttttagct
     4081 atttccgaaa catgtaatag agttttctct actggaataa ttctagaggt tccattcatt
     4141 gtccatttct tttgattccg aaagatcaat taaaaaagcc tatttttgaa agtcttatca
     4201 aggttactga ttttatataa acttatatat tagttcatct attttttatt tactttgatt
     4261 tcgcgtcaga aagaagcaga gattattagt gaaattctgc tcaaggctgc aagcgaagca
     4321 gaattccgaa attctcttat aaaagatcca acagcaatac tagaaagata caatatttct
     4381 aatgaagcga agtatattat tcgaaaaagt ataatagatt taacacagta aagatatttt
     4441 ttcaataaaa attttacaaa tcctctaaaa ttaaatctta ttttttagtg aggaaattgt
     4501 atctgctatt cttttatagt tattgtcccc cgcctctgac tcacatctat tcattgatag
     4561 ccatacacac atcctgtgta tttctcctag tgcactct
//
LOCUS       DATIAS010000256         2314 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_999739, whole genome shotgun sequence.
ACCESSION   DATIAS010000256 DATIAS010000000
VERSION     DATIAS010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999739"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VLA74_05045"
     CDS             <1..428
                     /locus_tag="VLA74_05045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50110.1"
                     /translation="DIYNILTNREKLEYLLQEYEKKINHQLEKEQEELEIEYLKPELK
                     AKMKEEIRKHKEEQLILLKEYKQNIIDFIIDNIDSIRVEDLKIYEPIYKCYQEIGHCL
                     YCNTISNIICKNCFNNSHHINNKISLCIKHWQEHAIEKH"
     gene            complement(455..>2314)
                     /gene="dinB"
                     /locus_tag="VLA74_05050"
     CDS             complement(455..>2314)
                     /gene="dinB"
                     /locus_tag="VLA74_05050"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF002677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HSF50111.1"
                     /translation="NFRFAVKFPKVITHDKRLKDVGKDIEKFYDVMEPLYDKILVFLM
                     QFPPSLQIAEGLESLKNLQYILDPSFRYAIEVRHHSWFNELFYNYLKEKNYCLVWSQQ
                     DILVTPPVLTSDFLYLRLIGDRSIDERDFGKLKKDRTKEMQLWTSIIKDIEKNEKNVK
                     TAIIAANNHYAGFGPMTAKLFAEMMNLQSKIKSFLIVNYQILKNEVKENKNKNTNSKK
                     QWKGKAIFHVDINSFFSSCEEIRNPSLKGKPHAVIMTDQNNSNITKGVVATCSYEAKK
                     LGVQSAMPLYKALELCPNLILNAVDKKFYSKISHTVMEILERYADTFEQASIDEAYLD
                     CTNKISSSSSNTNNIITVEEYALQIKHTIKEKCDGLLTSIGVAPTKSIAKIASDYQKP
                     DGLTIVPVDELKNFLNPLEVERISGVGTKTQKILKEKMKIKTIGDLANTDVQMLIERF
                     GKKIGTWMWQVANGEDNDPVIPRGDHISLSNETTLEHFTLEKQIIKQSLYELIDELIE
                     RIRNNKYQFRTVGIKLVRTNFSIETREKSYTNYQNDRKSIESIIEELLNKFTLENSLS
                     SSTTTTNLIQKETIAKKILPIRKVGLRVSNLIAIDNNSKKDILFRQMTLLDYV"
BASE COUNT          765 a          340 c          280 g          929 t
ORIGIN      
        1 aagatatcta taacatttta actaatagag aaaaattaga atatttactt caagaatatg
       61 aaaaaaagat taaccatcag ttagagaaag aacaagaaga attagaaata gaatatttaa
      121 aaccagaatt aaaggcaaaa atgaaagaag aaataagaaa acataaggaa gaacaactaa
      181 tactgttaaa agaatataag cagaatatta ttgactttat tatagataat atagattcaa
      241 ttagagttga agatctcaag atttatgaac caatatacaa atgctatcag gaaataggtc
      301 actgtcttta ttgtaacact atatcaaata ttatctgtaa aaactgtttt aataacagtc
      361 atcatattaa caataaaatt tcgttatgta taaaacattg gcaagaacat gctatagaga
      421 aacactaaca cataatattc gttaattatt aacattaaac gtaatctagt agtgtcattt
      481 gtctaaatag aatatctttt ttactattgt tatctattgc tatcaaattt gatactctta
      541 atcctacttt tcgtataggc aatatttttt ttgcaatagt ttctttttga attagattgg
      601 tagttgttgt tgaagatgat aaactatttt ccagagtaaa cttattcaaa agttcctcta
      661 ttatagattc aatacttttc ctatcatttt gataattagt ataagatttt tctcgagttt
      721 caatactaaa attagttctt actaatttta ttcctactgt tctaaattga tatttattat
      781 ttcttattct ttcaattagt tcatcaatca attcatacaa agattgtttt ataatttgct
      841 tctccaatgt aaaatgttct aaagttgttt cattacttaa tgatatatga tctcctcgtg
      901 gaataactgg atcattatct tctccatttg caacttgcca catccatgtt cctatctttt
      961 ttccaaatct ttctattagc atttgaacat cggtatttgc taagtcacct atagttttga
     1021 ttttcatttt ttctttcaga atcttttgtg tttttgttcc tacaccagaa attctttcta
     1081 cttctaatgg attcaaaaaa ttcttcaatt cgtcaactgg tacaattgtc aatccatctg
     1141 gtttttgata atcagatgca attttagcaa tagattttgt tggtgctaca cctatagatg
     1201 ttaataaacc atcacatttt tcttttatgg tatgtttaat ttgtagagca tattcttcta
     1261 ctgttattat attattagta ttagaagagg aagaagaaat tttatttgta caatccaaat
     1321 atgcttcatc tatacttgct tgctcaaaag tatcagcata tctttctaat atttccatga
     1381 ctgtatgtga tatcttacta tagaattttt tgtctactgc atttaaaatt aaattaggac
     1441 ataattctaa tgccttgtat aagggcattg ctgattgtac accaagtttt ttggcttcat
     1501 acgaacatgt tgctactaca ccttttgtaa tgttactatt gttctgatct gtcattatca
     1561 ctgcatgtgg ttttcctttt aatgatggat ttctaatttc ttcacatgaa gaaaaaaatg
     1621 aatttatatc tacatgaaaa attgcttttc ctttccattg ttttttagag tttgtatttt
     1681 tatttttatt ctctttgact tcattcttta gtatttggta atttacaatc agaaatgact
     1741 ttattttact ttgtaaattc atcatttctg caaataactt tgcagtcatt ggcccaaaac
     1801 cagcataatg attgtttgct gctattatgg ctgttttaac atttttttca ttcttttcta
     1861 tgtctttgat tatactagtc cataattgca tttcttttgt tctatctttt tttaatttac
     1921 caaaatctct ttcgtcaatg cttctatcac caattaatct caaatataga aaatcagatg
     1981 ttaaaactgg aggtgtaact aaaatatctt gttgactcca tactagacaa taattttttt
     2041 ctttcaaata gttatagaaa agttcattga accaactatg atgccttact tctatagcat
     2101 atctaaatga tggatccaaa atatattgta aattttttag cgactcaagg ccttctgcaa
     2161 tttgtagtga tggggggaat tgcatcaaaa aaacaagtat cttatcatat aaaggttcca
     2221 ttacatcata aaatttttct atatcttttc ctacatcttt taaccgctta tcatgagtaa
     2281 taacttttgg aaatttcaca gcaaatctaa aatt
//
LOCUS       DATIAS010000257        10466 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1679966, whole genome shotgun sequence.
ACCESSION   DATIAS010000257 DATIAS010000000
VERSION     DATIAS010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 10466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10466
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679966"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..410
                     /locus_tag="VLA74_05055"
     CDS             267..410
                     /locus_tag="VLA74_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50112.1"
                     /translation="MGLYLFNVFDIFTREWVGYYCFDLSAVKENAIIAIENALVTHND
                     IVP"
     gene            1350..2387
                     /locus_tag="VLA74_05060"
     CDS             1350..2387
                     /locus_tag="VLA74_05060"
                     /inference="COORDINATES: protein motif:HMM:NF012486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosinase family protein"
                     /protein_id="HSF50113.1"
                     /translation="MSSLLRVRKDVGSLTTDEKTKFVNAVLELKKAPSKFYPDDETKN
                     RYDDYVEIHHHSMMAGSDTNPNTDPNWYPGWAHLGPAFFSWHRQYLLQFENDLQTTSK
                     DNSITIPYWDWTIESSFPFTNDFLGSDGEQTGSEAAGKVIEGPFAYDGPNNWTINFKD
                     DPSDPPYLERGFGRINNAKRLPTPEEVRISMYITNFDSPPWKYLSRGFRRIVEINFHN
                     LVHRWVNGNMVTMASPNDPVFWLHHSNVDRLWSIWQRNNPEVGWHIPARSAPLGHNLY
                     DTMIFDHMDRDLGFTPLAAADVINTVRLGYTYESEMEFTLMEIQKKPTIEIDLTKRPF
                     LPPFPLENELK"
     gene            complement(3026..3229)
                     /locus_tag="VLA74_05065"
     CDS             complement(3026..3229)
                     /locus_tag="VLA74_05065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50114.1"
                     /translation="MLEGLGIDVIVKRNTTTTSSSNNISEFGVGDDEDDTTGKTSGIE
                     EKEDTDSNKNKNKKIHPLSLSGK"
     gene            3438..4196
                     /locus_tag="VLA74_05070"
     CDS             3438..4196
                     /locus_tag="VLA74_05070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50115.1"
                     /translation="MFQNSADAISPGFPRQVIIDDGKDWFLKNLLKAPDSNINTTKCN
                     ENKSFFPSYPDIEEINYLSDGKFLNATVWLSSFFEEPKQYYNFSFNKGPIKKTNLSID
                     KNIVSVDVKNLENKNMNLNEYTQQKIFSLKKLPSFANMEASSTLLSNILAHKVIYEYN
                     KQNDHIKAIKIWTIANDKIYTITYLAEREKFDYYLPSVQNIINSFDIKKNNSFTLNKS
                     LIDNKYQTYVNDTLELTLQYPMDWKKESRIILHL"
     gene            4160..5128
                     /locus_tag="VLA74_05075"
     CDS             4160..5128
                     /locus_tag="VLA74_05075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50116.1"
                     /translation="MEKRIKNNPALIIFYPPSTESLFQTGRIIVMAMDVNSGYDFRGE
                     DYRVTLDWDPTIRNWTRLVQESKASMGEDRTLDSGEYLILEQQKNYGGFFNKEKNYVK
                     LSMDLSKINFPDQYSLVFFVIDSYSNRNYTCNIDLFDMSDEVHIPPPEFSFIVSPSSI
                     SLRPGEEAKLELQIKNTNAKLNSKVSLSTNTTKELDIKFIPNSTSVPPSGLSTSVIYL
                     NAKENATDRPYTFSIKANITFPSQLTNYLTNEKFFTIGGGARIYESSDVTVTIIPLLK
                     IEEKFNSFITTWFNPITSTYTTIITIITGLLGWSIWKRKKKNQQDK"
     gene            5272..5919
                     /locus_tag="VLA74_05080"
     CDS             5272..5919
                     /locus_tag="VLA74_05080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50117.1"
                     /translation="MMLTFFIFPLLQLNAQVPAEEFKITTTCSDTEIQASEKEKDKSL
                     VTDDKGKEEFFIYGNASLGYKIEYPNDWQGIQTHCLLEGAGMIQASSIVNFMSTPNSS
                     KNGLLGITVADYSTGLSIDEFVKVYSQDFGSMIESKEIIMLDGKPSAKFIINAGNDNK
                     LIQITVLSNDKKYDITHPISSSISNSTIQYMINSFKIFDKDTLNSEDVSEANELG"
     gene            6180..6716
                     /locus_tag="VLA74_05085"
     CDS             6180..6716
                     /locus_tag="VLA74_05085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50118.1"
                     /translation="MLFVSGILVFGVTNSYAQDFSQQNLDFINLEEMKMLIHLPSTWK
                     STFQNGVIHMMDTQNPDIVADAGAIPPHASTPFPSDDSPLNEVAKNIENYISSLPGFV
                     QLLGSYEEPSLNAHSIYFQYKIDDLQMFDATIYKISDGNLYYLIVTMPAEIAQENMEI
                     VSFLTTYFVVGEEYDSMH"
     gene            complement(7749..10352)
                     /locus_tag="VLA74_05090"
     CDS             complement(7749..10352)
                     /locus_tag="VLA74_05090"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HSF50119.1"
                     /translation="MKINYPPEIPFKINYMKLDINNIDFNDKKIYGRELISLTALADF
                     NRIELDVGKDILIDSILISTAASENPFELIDFNYENKNEKLEISLKNKVIENENFSLL
                     IIYSAKGSEPGKGFYFVEHPEYQRYAWTQGESVFSKTWFPCIDHPKLKYPRTVSVIIP
                     KDLTVISNGILSIMEENKISDGMKKITWEERHPNPAYLTSLAIGKYLEISNNQKYKNI
                     PLRYYVPPGREKDGERTCRRTYDMMTIYEEYFGVKYPYDKYSQVFAKDMDEYQIDGME
                     HSTCTTLDIDAVLATEDTPEYRIREDVIAHELSHHWFGDLVTCYDWQDIWLNEGFAAF
                     CEVLFYEKVEKKPMKSMFQYQTYVLDLMDRYIRGTKNPKSRNKYRPIATREYDDPEEL
                     FDFIPYKKGGFIIHMLRMLLGEDYFREGLKLYLNRFKNSTAKTDDLRQIFEEISKRDL
                     QQFFQQWIFTGGHPVLDLIISDNHNKIFLYLNQKQEGEIFSFPLEIKCVFTDDTFDEK
                     KVYVNKRSLNSEFTFPKKISWISVDPYNKILKEYDVCRVDLPLIINQLINGNTLFEKV
                     DAARIIKINYLSNKLVEYPEEIIQALQTSIQSNSHWKVSVESVRTLGSIRFIDEKMNI
                     QVFNIIKNLLNQTSNPRIRNEINVQLIKFENIDQFEFAKSILEDKSTTIDEKRINAIN
                     IGTKTQEKNIKEAIDILKNLLIIKSYKKLLERGAIEGLKRIAIDSKDKNIIKEIEKII
                     VDHSKSNDSRLRREATSALGYLASRHEESKNSIMENLKLLIYDKSIFVRNTACAAICN
                     IFHSTNDKEIISLFNNIIQSDSNDEVKITANECIKLVKTHEHIKEEEPDIDPKYLSKE
                     IEELENIETYN"
BASE COUNT         3797 a         1488 c         1460 g         3721 t
ORIGIN      
        1 caatgattga acaagagata cagcaaatct ctctgcaaag accaacttat ggtaccagaa
       61 gaatggctgc aatgcttaca agaattcttg gaatacctgt taacagaaag agggtacaca
      121 gagaatattc agaaagatgg gttacattac accatctaaa agtaagaagg atataatacg
      181 ttcaaaaata cataatgtaa aagcagatag accaaaccag gtatgggaag cagatctaac
      241 ctacatacat tgtgtggtat tgatggatgg ggctctacct cttcaatgtg tttgatatat
      301 ttacaaggga atgggttggc tactactgtt ttgacctgtc tgcagtaaaa gagaatgcga
      361 taatagcgat agaaaatgct cttgtaacac acaatgatat agtaccttaa aacttactgg
      421 ttatcagaga acagacaacg gttcacagta tacaaacaag caaagcattt agaaaatctc
      481 tatctgtact actaggattg aaactggaac atatctatct actacaatac gccagaacag
      541 aacggacaca tatagaatca tttcacaaga cactaaagaa agagtacatt tggtcaaatg
      601 attttcagaa ctatcaatca ggaagcagaa ttggcaataa gagatgcatt cactgattac
      661 aacacaagaa cagaatacat tctgcactgc gatatctaac accctattat gagtttattt
      721 caaaatggaa aatgcaacaa gatattgaag aggagaagaa gaagaagaag gtgataaata
      781 ttggtaatga aagaaaatag tagtatctat atgaaaatgg gaaaagtgtt cccaaaaata
      841 ggggtccact ccacagttat ggataagttc atgggtataa acaagtataa tctacgaaca
      901 tattcaaaaa cattccagtt tattcataat agtagatcca gtacaagaaa ggaaagattc
      961 atgaaaatcc tttgttaatt aggatctgaa acatttagaa ataagagcga ctgaaattaa
     1021 tatcttacag taaataataa tctttttaca tataatagat ttcattattt taattcctat
     1081 gtattactta tccaattaat ttttttcggc gccgcaaaac taatataata taattttata
     1141 ttgttaaata attttatatt taaaaagcaa taggtaacat tcattgaatc ttattgaatt
     1201 taaattatat atttttattg atccaagcat aaattaaaaa ttaaattaca aataataata
     1261 tcatataaat aaatgccgag ataaagtaat tataataaca aaaaaaatta tataaatagt
     1321 cttttatatc acatcaaaat agtagaaaca tgagttcttt attacgtgtt cgtaaagatg
     1381 taggtagttt aactacagat gagaaaacaa aatttgtaaa tgctgtatta gaattgaaaa
     1441 aagcacctag taaattttat ccagatgatg aaacaaaaaa tagatatgat gactacgtag
     1501 aaattcatca tcattcaatg atggctggtt ctgataccaa tccaaacact gatccaaatt
     1561 ggtatcctgg ttgggcacat ttaggtccgg cttttttctc ttggcatagg caatatttat
     1621 tacaatttga aaatgatctt caaactacaa gtaaagataa ttcaattaca attccttatt
     1681 gggattggac gattgaatca tcctttccat ttaccaatga ctttttaggt tctgatggag
     1741 aacaaactgg ttctgaagct gctggcaagg taatagaggg accatttgca tatgatggac
     1801 caaataattg gactattaat ttcaaagatg acccatctga tccaccatat ttagaacgtg
     1861 gttttggcag aataaataat gctaaaaggt taccaactcc cgaagaagta agaatcagta
     1921 tgtacataac taattttgat agtccaccat ggaaatatct atctagaggt tttagaagaa
     1981 tagttgaaat aaattttcat aaccttgttc atagatgggt caatggcaac atggttacaa
     2041 tggcttcccc aaatgatcct gtattttggt tacatcattc aaacgttgat agattatggt
     2101 caatatggca acgtaataat ccagaagttg gctggcatat cccagcaaga agtgcccctc
     2161 taggtcataa tctatatgat acaatgatat ttgatcatat ggatagagat ctaggattta
     2221 ctccacttgc agctgcagat gttattaata ctgttagact aggatataca tatgaatcag
     2281 aaatggaatt tactttgatg gaaatacaga aaaaaccaac tattgaaata gatcttacaa
     2341 aaagaccttt cttgccacca tttccgttag agaacgaatt aaagtaaaat aataaaataa
     2401 acaaccatta atttttggaa attctactat tctttattct accaagagcc tatccgaaaa
     2461 ttcctcctct cttatatgtt atccaagcac agggctgtga ctatatgaaa atctttattg
     2521 ggtgacatcc ctattgtata caggtaggtt ctaaattaac atactccatc tatgagagtg
     2581 aggctgtgac tgaacctata tccgagcggc tatacaagta cctcatagag aagaaggtga
     2641 atatatgttt ttgccgcctg caagcctaaa taaaaaataa gaagaaaaga agaaaataaa
     2701 aagaatgaaa agtaacatat ctagcatagg ctattttaga taatttttaa tattatcaat
     2761 tataatagaa tattacgctg gacaggaaca taaggatgac ctgatacagg tagagatttt
     2821 catggatgtt aacttaagga taaagtaata ggtatgttct acttttttat attatgttct
     2881 gtgctcaatt tcagaagaat tttataattt aattcgtaaa ttttccttaa cttgacagag
     2941 ccaatgtctc catctttttt atggttattt tgttcttgat ttggttttga ttgtaatggt
     3001 ggtggagtta gtggagatag tggagttatt ttccggataa tgataatgga tgtatctttt
     3061 tgttcttatt tttgttacta tctgtatctt ctttttcttc tattccagaa gtcttaccag
     3121 tagtatcatc ttcatcatca ccaaccccaa attctgaaat attgttgctg ctagatgttg
     3181 ttgtcgtatt tcttttaaca ataacatcaa ttccaagacc ttctaacaaa tactttagta
     3241 aaatatacct ttttttatat aaatgatttc ataaataaag aaacataaaa gtgagagaga
     3301 gtgagagtga gagaaaacag ttaaatgcag tagaattcta ggagttttgt actttgaaat
     3361 atatctcgaa gttattactg aataatttca taaattctct ctacttattt attgtaatca
     3421 ttttcatatt ttctatattg ttccaaaata gtgctgatgc tatatcaccg ggctttccac
     3481 gacaagttat tattgatgat ggaaaagatt ggtttctaaa aaatctatta aaggctcctg
     3541 attcaaatat caatacaact aaatgtaatg agaacaagtc cttctttcca tcttatccag
     3601 atatagagga gataaactat cttagtgacg gtaaattttt gaatgccact gtttggctat
     3661 cttctttttt tgaagagcct aaacaatatt ataatttttc ttttaataaa ggacctatta
     3721 aaaaaacaaa tctttctatt gataaaaata ttgtttctgt agatgtaaag aatcttgaaa
     3781 ataaaaacat gaatttgaat gaatataccc aacaaaagat attttcttta aaaaaacttc
     3841 catcatttgc aaatatggaa gcaagtagca ctttgctatc taacattttg gctcataaag
     3901 taatatatga atataataaa cagaatgacc atataaaagc tataaaaata tggacaatag
     3961 caaatgataa aatttatact attacttact tggcagagag agaaaaattt gactattatt
     4021 taccaagtgt gcaaaatata ataaattctt ttgatattaa aaaaaataat tcatttactt
     4081 taaacaaatc attaatagat aataaatacc aaacttatgt aaatgacaca ttagaactaa
     4141 cattacaata tccgatggat tggaaaaaag aatcaagaat aatcctgcac ttataatatt
     4201 ttatccacca tccacagaat cattatttca aactggaaga ataatagtaa tggcaatgga
     4261 tgtaaactca ggttatgatt ttagaggaga agattatcga gtcacattag attgggatcc
     4321 aactattaga aattggacaa gattagttca agaatcaaag gcatctatgg gagaagatcg
     4381 cacattagat tcaggagaat atctaatatt agaacagcaa aaaaactatg gaggattttt
     4441 taataaagaa aagaattacg tcaaactatc tatggatctt tctaaaatca attttccaga
     4501 tcaatatagt ttagttttct ttgttataga tagttatagc aatagaaatt acacatgcaa
     4561 tatcgatctt tttgatatga gtgatgaagt acatattcct ccacctgaat tctcttttat
     4621 tgtctctcca agctctattt cattaagacc cggagaagaa gcaaaattgg aattacaaat
     4681 aaaaaatact aatgcaaaac taaactctaa agtatcactt tctaccaata caactaagga
     4741 attggacata aaatttatac ctaatagcac atcagtacca ccttctggat tatccacttc
     4801 tgtaatatat ttaaatgcga aagaaaatgc aactgatcgt ccctatacat tttcaataaa
     4861 agcaaatatt acttttccat cacaattaac caattatctg accaatgaaa aattttttac
     4921 tattggtggt ggtgcaagaa tctatgaatc atctgatgtt actgtgacta ttatacctct
     4981 gttaaaaata gaagaaaaat tcaattcttt tatcactact tggtttaatc cgattactag
     5041 tacttataca accataataa caattattac aggactatta ggttggagca tttggaagag
     5101 aaaaaagaaa aatcaacaag ataagtaatt acaatgatat acaaaaataa caataacgat
     5161 tatctttaat taaataatat acagatacct ttaagtaata atatatcctc ttaaaataca
     5221 agttttataa agtatcaatt aattttttta ttaattattt atttttcatt ggtgatgtta
     5281 acatttttta tttttccatt gttacagtta aatgctcaag ttccagcaga agaatttaaa
     5341 atcactacaa catgttctga tactgaaatc caggcttccg aaaaagagaa agacaaaagc
     5401 ttagttactg acgataaagg aaaagaagag ttttttattt atggtaatgc atcacttgga
     5461 tataaaatag aatatccaaa tgattggcaa ggaatacaaa ctcattgttt attagaaggt
     5521 gcaggtatga ttcaagcatc atcaatagtc aatttcatgt caaccccaaa tagcagtaag
     5581 aatggtctat tgggaataac tgtggcagat tattcaacag gactttccat agatgaattt
     5641 gttaaagtat atagtcagga ttttggtagc atgattgaat caaaagaaat tattatgcta
     5701 gatggaaaac cttcagctaa atttataatt aatgctggaa atgacaataa attgatacaa
     5761 ataactgtat tatcaaatga caaaaaatat gatattactc atcctatatc aagttcaata
     5821 tcaaattcaa ccatacaata tatgatcaac tcctttaaaa tatttgataa agatacttta
     5881 aattctgaag atgtatcaga agcaaatgag ttaggataaa gttaataaat taaaatatta
     5941 ctttttgttc tcaatttata aaaactattg aagagataag tcatcattta ctattacaca
     6001 tatttggaag aaaagtaatt aattcaaaga tttgttacca ggttgttagt gcatctctta
     6061 aaagttatag caacattaat gagatattgg taagataagg ttatttagaa aaaatattat
     6121 acattagttt ttataagtaa caaataaatg gaaaacagct taaataaaaa ggtgttttta
     6181 tgttgtttgt aagtggaatc ttagtttttg gtgttactaa tagttatgct caagatttta
     6241 gtcaacaaaa tctagatttt ataaatttag aagagatgaa aatgttgata catcttccta
     6301 gtacatggaa atctacattt caaaatggag ttatacatat gatggatact caaaatcccg
     6361 acatagtcgc tgatgcagga gcaattcctc cacatgccag tacaccattt ccatcagatg
     6421 atagtccgct taatgaagta gcaaaaaata ttgaaaatta tataagttct ttaccaggtt
     6481 ttgttcaatt attaggaagt tatgaagagc catcattaaa tgcccattca atatattttc
     6541 aatataaaat tgatgatcta cagatgtttg atgcaacaat ttataaaatt tctgatggta
     6601 atttatatta tcttatcgta acaatgcctg ccgagatagc ccaggaaaat atggaaattg
     6661 tgtcattctt aactacttat tttgtagtag gcgaagaata tgattcaatg cattgataaa
     6721 atccttagac tcatcttttt tagataatac ttaatttgtg cgtactcaat ttttatagaa
     6781 aaggcgatgc taaatatcgt tgttaatcta ttgcagagat ttatagtaac aattaagaga
     6841 tataataaag tgacaatctt ataaatacta ggtttagttt tcatactata agctatattc
     6901 aaatgaattt attacttaat taaaatttat cggcgcctca aaattttata ttaattcaaa
     6961 tttgatatat cctttgttta ttgttagaac tttagtcttt agcaaatttt gatatctata
     7021 ttgcttaaaa aaaataaatt tgtttgataa cttgttataa atatgctgat ctgaatttat
     7081 aaagatgaaa taaacaataa atccttattt ttaatatcaa attaacaatt aaaattactc
     7141 aactaaattg ataataagta gatcttttgc gtaattagca accatttaaa atattacata
     7201 tatgatctaa gataaaaaat attattatta tttattctca tttgaaacaa tattttgcta
     7261 tactataata gagcagatta aattataagt atattactat tttttatatt tattgatcta
     7321 tagatggttt ctaaaattat atacaattcc ttgttagatt tgtaaaaaat aactggctct
     7381 attgaagggt taaaatccca ccgaatcctc gcatctttat aaattatttt aaacattaat
     7441 atgattttac aattttcttt tcttaatgat ttcaaataaa atgattataa aaagtaaaga
     7501 ttaatttcta gtttctatta ttattacttc atgaattcta caaaaaagag gattggaacc
     7561 cggagtttaa ttgggccagt gggatgtgaa cccttctata aagtgggacc agttaattta
     7621 gtatttttgt aattatttga atgatattat atgaattaga gttacataat tttgattaga
     7681 actaaaatag ataagaaaac attatcaaaa tatttgaatt tttattatcc tataactata
     7741 attctcaact aattataggt ttcaatgttc tctaattcct caatttcttt tgataggtat
     7801 tttggatcta tgtctggctc ttcttcttta atatgctcat gtgttttaac taacttgata
     7861 cattcattag cagtaatttt tacttcgtca tttgaatcag attgtataat attattaaat
     7921 agacttatga tctctttatc atttgtactg tgaaaaatat tacatattgc agcacaagct
     7981 gtattacgga caaatataga tttatcatat ataaggagtt ttaaattttc cattattgaa
     8041 tttttagatt cttcatgacg tgaagccaaa taacccaatg cagaagtagc ttctcttctt
     8101 aatcttgaat catttgattt actatgatct actataattt tttctatttc ttttattata
     8161 tttttgtctt tggaatctat agctattctc tttaatcctt caattgcacc gcgttccaat
     8221 aattttttat atgattttat tattaataaa ttctttaaaa tatcgatagc ttccttaata
     8281 tttttttcct gagtttttgt acctatatta atagcattaa ttcttttttc atcaattgtt
     8341 gtacttttgt cctctagaat tgattttgca aattcaaatt gatcaatatt ctcaaattta
     8401 attagttgga catttatttc gtttctaatt ctcggattag atgtttgatt tagtaaattc
     8461 tttatgatat taaatacttg aatattcatt ttttcatcaa taaatcttat tgatcctaag
     8521 gttcttacac tctcaactga tactttccag tgactattag attgaatgct ggtttgtaat
     8581 gcttgaatta tttcttcagg atattcgact aatttgttac ttagataatt tattttgatt
     8641 attctagccg cgtcaacttt ttcaaaaaga gtattaccat ttataagctg attaataata
     8701 agaggaagat caactctaca tacatcatat tcctttaata ttttattata tggatcaacg
     8761 gatatccatg atatcttttt tggaaaggta aattcagagt ttagagatct tttattaaca
     8821 tatacctttt tttcatcaaa agtatcatca gtaaatacac attttatttc tagtggaaaa
     8881 gaaaaaattt caccttcttg tttttgattt aagtataaaa atattttatt gtgattatca
     8941 gatataatca aatctaatac aggatgacct cctgtaaaaa tccattgttg aaaaaattgc
     9001 tgaagatctc tttttgatat ttcttcaaag atttgtctaa gatcatcagt ttttgcagta
     9061 ctgtttttga acctatttag ataaagtttt aagccttccc tgaaataatc ttcgcctaat
     9121 aacatcctta acatatgaat aataaatccg ccttttttat atggaataaa atcaaataat
     9181 tcctctggat catcatattc tctagttgca ataggacggt acttatttct tgacttagga
     9241 ttttttgttc ctcttatata tcggtccatt aaatctaaaa cgtaagtttg atattgaaac
     9301 atcgatttca ttggtttttt ttcaactttt tcatagaata atacttcaca aaatgctgca
     9361 aatccctcat tgagccatat atcttgccaa tcataacatg taacaagatc accaaaccaa
     9421 tgatgcgata attcatgtgc aataacatct tcccgtattc tgtattcagg cgtatcttca
     9481 gttgccaata cagcatctat atctagtgtt gtacatgttg aatgttccat tccatctatc
     9541 tgatattcat ccatatcttt ggcaaaaacc tgactatatt tatcatatgg atattttaca
     9601 ccaaaatatt cttcatatat tgtcatcata tcataagttc ttctacacgt tctttcccca
     9661 tctttttctc gtcctggtgg aacataatat ctcaatggta tatttttata tttctgatta
     9721 ttgctaattt ccagatattt accgatcgct aatgaggtta aataagctgg attaggatgt
     9781 ctttcttccc atgtaatttt tttcatacca tcagaaattt tgttttcttc cattatactt
     9841 aatatgccat tggatatgac agttagatct ttgggtatta ttactgatac tgtcctagga
     9901 tactttagtt taggatgatc aatacatgga aaccaagtct ttgaaaaaac agactctcct
     9961 tgcgtccatg catatcgttg gtattctgga tgctccacaa aataaaatcc ttttccaggt
    10021 tctgagcctt tggcagaata tattatcaat aaactaaaat tttcgttttc aataacttta
    10081 ttttttaaag aaatttctaa cttttcattt ttattttcat aattaaaatc tattaattca
    10141 aatggattct cacttgctgc agtggatatg agaatcgaat cgattagaat atcttttccg
    10201 acatctaatt caatacgatt gaaatctgct aatgctgtta acgagatcaa ttctctacca
    10261 taaatttttt tatcattaaa atcaatatta tttatatcta atttcatata attaatttta
    10321 aatggaattt ctggaggata atttatcttc atatcaatat ttattaccaa aaattattta
    10381 atatttaatc ttatttgtat aatcaaataa tcatactcat ttattatatt ttaaaaatga
    10441 attaaataaa aaatttttcg gcgcct
//
LOCUS       DATIAS010000258         3857 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_864007, whole genome shotgun sequence.
ACCESSION   DATIAS010000258 DATIAS010000000
VERSION     DATIAS010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864007"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VLA74_05095"
     CDS             complement(<1..451)
                     /locus_tag="VLA74_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50120.1"
                     /translation="MALNLYKLAFPGILALIVIGTVGFLLAFSYYPEKHVNVNIDGTC
                     YELLDASNEKHKILRAENEINVKLIQLKMIESGDASLPIVFSGFNESVNDFIKDYNIR
                     NIISIQKVSDNATFDKFIVNAILSKNGLQKIVNDLTVGDFYPTLTVKG"
     gene            complement(595..798)
                     /locus_tag="VLA74_05100"
     CDS             complement(595..798)
                     /locus_tag="VLA74_05100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50121.1"
                     /translation="MNQLKNIDLFELDRVLEDIAKTYAAPSATVWFKVTNNGKPSQDE
                     YHEKVIEFIKKFEDLLISCFPNN"
     gene            complement(1610..2443)
                     /locus_tag="VLA74_05105"
     CDS             complement(1610..2443)
                     /locus_tag="VLA74_05105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50122.1"
                     /translation="MVSLIYIESYFSFSTLADVKPYPITSYIVNLPGSPITESLSVVF
                     DILSLSSFLLMWVATGILLSQYRHKMGRIRFFSLMSIPLIYYIFPFQNYFGDVFFLLL
                     SSSPVIFSVIYILIFSATKQVGALLFSLSFWTASSLVHHDRVYKSLLISSIGMVILFC
                     STEIAPLRSHVYPPYGLITEAFIPLGAYLLLVGIFTSAQHISQDARLRREFYKSAASQ
                     LSLLKDIGVSQMEKEFEAKIKSLQQRSRLSERKDEPHLEEEHVKEILRDVLNELYYSK
                     K"
     gene            2760..2984
                     /locus_tag="VLA74_05110"
     CDS             2760..2984
                     /locus_tag="VLA74_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50123.1"
                     /translation="MGLLIRNSMEKMRKIPTFSHIGILTPLYEEKSTIVDSNTITVVK
                     IKMKKSELLLVSSTVAKLIIFSFILRNRIS"
     gene            3076..>3857
                     /locus_tag="VLA74_05115"
     CDS             3076..>3857
                     /locus_tag="VLA74_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50124.1"
                     /translation="MNSNSIFCTVKKLGGSNFIFSTFLLFSIFFAIFGLNSVYATIEL
                     FSKDEKPFAVPYDDWVSRYFNWDFSMNIDEFTPKPDGCIIDKSAELVMLLNTIADGSV
                     HQVCEISPKQGIMIPMWIAWCDMGTDRPHIQNPNFNLDEQLTKCAREVYNLGNIRSEV
                     KVDGIRVANLDVKLSSASGSLDYKINSLTNVTELYTGGFNVTLPSDTHQAGVEPGTWR
                     AGSHGWWVFLKPLPPGEHTISYNVRITPTGALTSAGTSPHFV"
BASE COUNT         1335 a          634 c          606 g         1282 t
ORIGIN      
        1 ttccttttac tgttaatgtg ggataaaagt cacctactgt cagatcattt actattttct
       61 gaaggccatt ctttgataat attgcattta ctataaattt atcaaatgtt gcattatccg
      121 aaactttttg tattgatatt atgtttctaa tattatagtc ttttatgaaa tcatttacac
      181 tttcattaaa tccactaaag actattggta aactagcatc accagattca atcattttta
      241 attgtattag tttaacgttg atttcatttt ctgctctgag aattttatgc ttttcattag
      301 aagcatctaa taactcataa catgttccat caatatttac atttacatgt ttttctggat
      361 aataactgaa tgctagtaga aagcctaccg ttccaattac tattaatgct aatattccag
      421 gaaatgcaag tttatataaa tttaaagcca tttcttttgt tcatccttac cctgttaatt
      481 gtaatcgacg taatatcgat atcttctttc tacttccttg ttatttcctg cattaactaa
      541 tgagattcca tgtcttatat tttttgaaat atactctttc aagtaatctg aatgttaatt
      601 atttggaaaa caagatatta gcaaatcttc aaattttttt ataaattcga taaccttttc
      661 atgatattcg tcttgtgaag gtttaccatt attggttact ttaaaccata cagtagctga
      721 aggtgcagca tatgtttttg caatatcctc taatactcta tctagttcga agagatctat
      781 attttttagt tgattcataa ctatactacg tcatatgtaa taatattttc tacggaatta
      841 tttttggttt ttattttcca tttcggaata tatatatgag atatttctat ggcatgaata
      901 tgttatttta ataatcatca tcaaagtttt ccgaatcgga aataatgaat ataataccaa
      961 taatttagaa aaggaaattg aaaggtgtta gccaactcct tcttttagta aagtaaatct
     1021 ccttttaata aaataaatga caattatatt tatataaatt ctattaattc attaaatcaa
     1081 aagtaaaacc catgtaattg gaattcgtat ttaattggtc ccattctaga aaagaattca
     1141 atatttttcc aataaggata ttaaatatat tacttatcaa taaattataa tggttaaagt
     1201 agccaccaat agatataacg attagctcca tttttctatc tatttcagtg gtttgtgaaa
     1261 caaatttgac ataattttta gatctacaca acatattatc tcaagcaggt ccactgggat
     1321 ttataatgtt actaccctaa ttttttgaac ctacattagt taatttttat aaatggatat
     1381 ataatcaaag cataataata acaaacatga tagaaaaatt ttcttctaat acatcttaca
     1441 agagttaatc tctatgtatt accagttcta gcggcacaat tacattaatg caaccattaa
     1501 aagtagcaat attatggggg tttaaattag aaaataatac ataacatgtc acaaatcacc
     1561 aaaaaagcta aaaaaataat aatacttaat ccaaaattta gcttttcctt cacttctttg
     1621 aatagtaaag ttcattcaag acatcacgta agatttcctt tacatgctct tcttccaaat
     1681 gtggctcatc ctttctttct gacaatctag aacgttgctg caaagatttt atttttgctt
     1741 caaattcttt ttccatctgt gatactccga tatcctttag aagactcagc tggctcgccg
     1801 cactcttgta aaactctctc ctcagtctgg catcttgaga tatatgttgg gctgaggtaa
     1861 aaatcccaac gagaagcagg tacgcaccta gtggtataaa tgcttctgtt attaacccat
     1921 atggtggata tacgtgactt cgtaatggtg ctatttcagt ggaacaaaaa aggatcacca
     1981 tgcctatgga agaaataagg agagatttgt aaacccgatc atggtgaacc aatgaagagg
     2041 cagtccaaaa agataaactg aataataatg ccccaacttg ctttgtagca ctaaaaatta
     2101 gaatatatat tacactaaaa atcactggag aggaggacaa caagaggaaa aatacatctc
     2161 caaaataatt ctgaaaagga aagatataat atatcaatgg tatgctcatt aatgagaaaa
     2221 atcttattct acccatcttg tgtcgatact gactcaaaag tatccctgta gctacccaca
     2281 taagtaagaa tgaagataga gagagaatat caaataccac tgagagtgat tcagtaattg
     2341 gtgaccccgg aaggtttact atatatgaag tgataggata cggttttaca tcggctaatg
     2401 ttgaaaatga aaaatacgat tcaatatata tgagagagac cacaaggttg acagaagcga
     2461 gtgagaaggc tatgatatac aacatgatta tataatttct tttggaagtt aaccaaccta
     2521 caaacataaa aactaggaac gagagaaata tcaatgcgga aagataacta agatacgttt
     2581 ggacctctaa caaaatgaga ctgtatttat ttagaaataa catttgtaca ataataatta
     2641 atatgatgga gccagtcaag atcatagtaa cactaacgat catttgaaga tacctaagac
     2701 ttagcggcat tgcctggtat gagtctcttg aggtaatctt tctcacataa ttcagcagga
     2761 tgggactact tattagaaac agtatggaaa agatgagaaa aatcccaaca tttagccaca
     2821 tcgggatcct gactccactg tacgaagaaa agtctacaat cgttgattca aataccataa
     2881 cagttgtgaa aattaaaatg aagaaaagtg agcttctttt agttagctct acagtggcta
     2941 aactaataat tttttccttc attttacgaa atagaatatc ttagcaagct gctatataaa
     3001 taagaatcgt attccactag tttaggttat cgaaaataat aataataaca ggaacattaa
     3061 tgatttaata aatccatgaa tagcaatagc attttttgta cggttaagaa acttggggga
     3121 tcaaatttta tctttagcac attcttgctt ttctcaattt tttttgcaat ttttggactc
     3181 aatagtgtat atgcgacaat tgaactgttt tcaaaagacg agaaaccatt tgccgtacct
     3241 tatgatgatt gggtttccag atattttaat tgggactttt ctatgaatat agatgaattt
     3301 actccaaaac cggacggatg cattatcgat aaatcagctg aattggttat gctactgaac
     3361 acgatagctg atggatctgt tcatcaggta tgtgagatct cgcctaaaca ggggatcatg
     3421 atacccatgt ggatcgcatg gtgcgacatg ggaactgatc gaccacatat tcaaaatccg
     3481 aattttaatc tagatgaaca attaacgaaa tgtgcgagag aagtatacaa cttaggaaac
     3541 ataagatcag aagtcaaggt ggatggaatt cgagttgcca atcttgacgt aaaactgtct
     3601 tccgcatccg gatcattgga ttataagata aattctctaa ctaacgttac cgaattatat
     3661 acagggggat ttaacgttac cttgccatct gatacccatc aagcaggtgt tgaaccaggt
     3721 acatggcgag caggaagtca tggatggtgg gtctttctaa agccacttcc tcccggagag
     3781 catacaatat cttacaacgt tcgtataact ccaacaggtg ccctcacttc agctggtact
     3841 agtccacatt tcgtaga
//
LOCUS       DATIAS010000259         2352 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1136122, whole genome shotgun sequence.
ACCESSION   DATIAS010000259 DATIAS010000000
VERSION     DATIAS010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1136122"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VLA74_05120"
     CDS             complement(<1..314)
                     /locus_tag="VLA74_05120"
                     /inference="COORDINATES: protein motif:HMM:NF016157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF424 family protein"
                     /protein_id="HSF50125.1"
                     /translation="MIKEDDSHFDKSGSEISPQYYVRKMRYQGSLMINICDENLLGKT
                     IKDESVNIEITRDFFNELMSEEEIQYLLKRCSIANLIGERVIKKTLKLGLAKKESVKV
                     IS"
     gene            complement(488..1195)
                     /locus_tag="VLA74_05125"
     CDS             complement(488..1195)
                     /locus_tag="VLA74_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSF50126.1"
                     /translation="MQAVILAGGLGTRLQPYTFFIPKPMLPLGNKPLLEHLVEWIAST
                     KIIDEIIICVSYLHRTIEDYFEDGGRLGIRISYARSERPLATAGQLKTTEKLVKGRFV
                     CLYGDSIYDFNLEQMIKEHEQSKAFLSMALMQYKTRLKYGFIEVQKKNKIVTGWREKP
                     EVEGLINIGCYVMEKEFLKFIPKSSTIGMDKIVQKIIRKNKCVKAFTIESGFIDIGDK
                     RSYLDAYKEFTKKLGKI"
     gene            complement(1431..>2352)
                     /locus_tag="VLA74_05130"
     CDS             complement(1431..>2352)
                     /locus_tag="VLA74_05130"
                     /inference="COORDINATES: protein motif:HMM:NF021625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine-phosphate synthase family protein"
                     /protein_id="HSF50127.1"
                     /translation="AEEITEIRIQKEQNLIEALKMIKEMGAKTVVIKSGQLKSNKVID
                     ILLDNENIIYKFSNPKKQIPENHGSGCNFSAALSAFTAKGYRVDQACKLANKFIQQIF
                     ERSLLEIGKGLPVADAGFANYYDSMKYNVLVELSKAVRDFENIRNVGILIPETQTNFV
                     YALPDAENIGDVAGVRGRIVKIGTAAKASSCVEFGTSRHVANAVLTYMQIDNSIRSAI
                     NLRLNEKIIDIGKSFLKTVQYDRTKEPIEIKRKEGSSIRWGIKSCLSQEKDARMIFHQ
                     GDIGKEPMIILFADNPKKIIKYIKKIINKY"
BASE COUNT          713 a          446 c          281 g          912 t
ORIGIN      
        1 tctgaaatta ccttgacact ttctttcttt gctaatccta actttaatgt ctttttaatt
       61 actctctcgc caattaaatt cgctatggaa catcttttaa gtaaatactg aatttcttct
      121 tcactcatta attcattaaa aaaatctctt gtaatctcaa tatttaccga ttcatcttta
      181 attgtctttc ccaacaaatt ttcatcacaa atatttatca ttaatgatcc ttgataacgc
      241 atttttctta cgtaatattg cgggctaatc tccgagccag acttatcaaa atggctatca
      301 tcttctttga tcaagtcaat tccccttctt tatttgtaaa aaatataaca tcttgcttgt
      361 atattaataa ttctttttgc actttcatgt ttgttctatc aaatggaaac aaaatatgat
      421 tattagcaaa ttacatccat aaagtaaaaa aatgttagga tgaattttga ttgctgtaaa
      481 tttagcatta tatctttcct aatttctttg taaactcttt gtaagcatct aaatatgatc
      541 ttttatcccc aatatcaata aatccagatt ctatcgtaaa ggcctttaca catttatttt
      601 tccttattat tttttgaaca attttatcca ttccaatggt acttgatttt ggaatgaact
      661 tcagaaattc cttttccata acataacatc caatatttat caatccttct acttctggtt
      721 tctctctcca tcctgtaact attttatttt ttttttgtac ttcaataaat ccatatttca
      781 acctagtttt atattgcatc aacgccatcg aaagaaaggc cttggactgt tcatgttcct
      841 ttatcatttg ttctaagtta aagtcataaa tagaatctcc atataaacaa acaaatctac
      901 ccttaactaa tttttcagtt gtctttaact gaccagccgt cgctagaggc ctttcagaac
      961 gtgcatatga tattcttatt cccaaccttc caccgtcctc aaaataatcc tcaatagttc
     1021 tatgtaaata actaacacag ataattattt catcaataat tttggtactt gcaatccatt
     1081 ctacgagatg ctccaataat ggtttatttc ctagtggtaa cattggcttg ggaataaaga
     1141 aggtgtaggg ttgcaatctg gtgcccaagc cacccgcaag tattacagcc tgcatttttt
     1201 agtaacttta gtaaatacta aattaatata cttttaagat attatttcaa taggataagc
     1261 gagaattaca tcaaaagaga gcaccggaac atttaataca atttattgtg aatgataaat
     1321 cgtaaaagag ataattaaat atataaaatc agttcttttc tcaaaaatat aataattttt
     1381 aaaaaatatg atctatttct ctctgaagtt ttaatcgcaa tcaatgatta tcagtattta
     1441 ttaattattt tttttatata ttttataatc ttctttgggt tatctgcaaa taaaattatc
     1501 atgggctcct ttccaatatc gccttgatga aatatcatcc ttgcatcttt ttcttgtgat
     1561 aagcaggact ttattcccca tcggattgac gatccttctt ttcttttaat ctctataggt
     1621 tctttagttc tatcatattg gacagttttc aaaaaagatt tacctatatc tataattttt
     1681 tcattcaatc ttaaattgat tgcagatcta attgagttgt ctatctgcat atatgttagg
     1741 actgcattcg caacatgtct tgaagtacca aattctacac aagacgaagc cttagctgca
     1801 gtgcctattt tcactattct acccctgact cctgccacat ctcctatgtt ttcagcatcg
     1861 ggtaatgcgt aaacaaagtt agtctgcgtt tcagggatca atatacctac gttcctaata
     1921 ttctcgaaat cccgcactgc tttggataat tctactaaaa cattgtattt cattgaatca
     1981 taatagttgg caaaaccagc gtctgcaacg ggcaatcctt taccaatttc taaaaggctt
     2041 ctttcaaaaa tttgctggat aaacttgttt gccaatttac atgcttgatc gactctataa
     2101 ccctttgcag taaacgcaga cagggctgct gaaaaattgc atccagaacc atgattctcg
     2161 ggtatttgtt tttttggatt agaaaattta taaattatat tttcattatc aagtaatata
     2221 tctataacct tgttactttt taattgaccg ctttttatta ctacagtctt cgcacccatt
     2281 tcctttatca ttttcagtgc ttcaattaaa ttctgttctt tttgtattct tatctcggtt
     2341 atctcttctg ct
//
LOCUS       DATIAS010000260         4731 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1000009, whole genome shotgun sequence.
ACCESSION   DATIAS010000260 DATIAS010000000
VERSION     DATIAS010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4731
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1000009"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            311..472
                     /locus_tag="VLA74_05135"
     CDS             311..472
                     /locus_tag="VLA74_05135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50128.1"
                     /translation="MATKVSKVKFKKIHRSENDINIKERMLLVLKVTYDKQIPVQVAR
                     DLQKQNMGF"
     gene            874..1323
                     /locus_tag="VLA74_05140"
     CDS             874..1323
                     /locus_tag="VLA74_05140"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50129.1"
                     /translation="MKKDERPIVKVTGSHQQSVLFGSISLEGKQLFRQYDWFNANTFL
                     DYLKHIHRKFPKCYLFLDKAKQQHYKSKIVLEYFDKHKKDLIPVYLPTASPEFMVLEE
                     IWHIAKNDLLVLQYYSSFTDLINKISSYFRTKRFHLNMRNYLLEGVS"
     gene            2863..4200
                     /locus_tag="VLA74_05145"
     CDS             2863..4200
                     /locus_tag="VLA74_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50130.1"
                     /translation="MMYDFFCIDIVGSSKDTKIQNDNIKNLLIVIKDFLSSYEKQIQT
                     VFTGDGVIIWFKEDSLLPLQLALKIHKEFPQIIGGESCLGLKIGIARGDAIVIDTAKS
                     LVGIPVWGNGPAIVRRLCELCDEGHILLDLSAYENFSTKHKKELEHILPSQSNSKFFQ
                     DLGEYFVKHQKPIHVFNFCNNIPNDVIPIFGNSNFPEDKRGMIDRINIDSELARPFDT
                     FFEYEGIILKKKIDQGQKIILLDESMKNMYHSLFEHAMKYDSINTMLPSIFLKYQSNT
                     SLLNYQARLMRRSMSQNDKTGSVRIMIMEKYRIEKDWENHNTRDACIDFLNWHKDWGV
                     TLLQIEPYYANEIRRNIEEATTFQFKSMDIGLWKNKYLIQLDEYQLDDKKVDGRRYNI
                     WVSDSNTISYVNCELLINTILDHNEIYEIKHDDDKQKPEFIKWNHNYWKSNFR"
     gene            4309..4602
                     /locus_tag="VLA74_05150"
     CDS             4309..4602
                     /locus_tag="VLA74_05150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50131.1"
                     /translation="MAKLKLYKRNSKFIDLADLVGEISSGGLMEGLQKYYNSPLEKEA
                     KSIVAGPSFLQFLNKSFQIQISAGDIINLESASHSKYYMLSLSGTWDEIIKLQ"
BASE COUNT         1901 a          588 c          696 g         1546 t
ORIGIN      
        1 agacattagt aagttatttg tgtaaaccaa cactaattac tttgttttat tatctatgaa
       61 caacttcttt cagaagtaac caatccaaag taatcacttt tactttacat tatatactac
      121 caaggtaatt acaatgctgt taacggagcc atttttatta ttcaaaattg ttgggaagag
      181 taatggtaac tagaatggga tattctaagc tataccagtt agcataagta tactgacatt
      241 tatctaatta tcaagtaata cactatagaa cataatagct atagcaaata ctattaatct
      301 agataatcta ttggctacaa aagtatcaaa ggtaaaattc aaaaaaatac acagatctga
      361 aaatgatatt aatataaagg aaagaatgct acttgtttta aaagtaacat atgacaaaca
      421 gattcctgta caggtagcaa gagatcttca gaagcaaaac atgggcttct gactggttaa
      481 agagatacag agaagaaggc atagaaggat taaaaaacag aacaaaaata gaaagacctc
      541 cagatatacc aggagaaata gtatacgaga taaaaaaacg agttagcatc caacagacaa
      601 ggatggacta caaaacaggt agaagatcta attgtaaaaa agagtggtcg aataagatac
      661 cattataccc acatatatcg acttatgcat aagtggggat taaacagaag gtaccaagaa
      721 aagtgcatgt aaatactaca tcaagagaag agaaagaaca ttttaaaaaa gagcaaaaag
      781 ataccattgg ataatctcca gcaggaagga tttactgtag tatctacaga cgaatcattc
      841 ttcttccttg attcacttgt aaggagagta tgaataaaga aagatgaaag acccattgtc
      901 aaagttactg gatctcatca acaatcagtc ttgtttggtt ccatcagttt agaaggaaaa
      961 caattgttca gacagtatga ctggttcaat gcaaatacat ttttagacta tctgaaacat
     1021 attcacagaa aatttccaaa atgttacctc ttcttggata aagcaaaaca acagcattac
     1081 aaatcaaaaa tagtactgga atattttgat aaacacaaaa aagatctgat tccagtatat
     1141 cttccaacag catctccaga atttatggta ctcgaagaaa tatggcatat agccaaaaac
     1201 gatctacttg ttctacagta ttattcatca tttacagatt taataaataa aatatcctca
     1261 tatttcagaa caaaaagatt tcatctcaat atgagaaact atctgttgga aggtgtcagc
     1321 taacatatgc taagtggtat aaatacaggg attacaaaaa tataaaaaaa cataacaata
     1381 attaaagtta ttagctacac ttctatcttt ataatcatga gtgatcaaac tgaaagagaa
     1441 gaaatgaggg atgaaactca tcatctagag aatgataaac aggaggagga agatgataaa
     1501 ttggaagaac aatatgaaga tgaataaact gccaatgttt aagactgagt taattactat
     1561 ttttatttat atcaaataat aattaaggta tatcttacaa catcacattc gaccaaacca
     1621 gatagaaatt cattaacaat ctataaacta cattatcagc ttaatactct tgcctaggat
     1681 gaggtgagta tctaaaataa aaaatatata gaaaaacata aagagatgaa ttaatatatt
     1741 tattagtata aattcaaaat gccagattgt gaaatgtgtg tggtattaat tccgacaaat
     1801 gctatctaat tgatttaaca ataaaatctg actttaataa agatgaacat gtctttaaaa
     1861 gaaatattac tatttgttca gaaagtaaaa ataaaataat agatatgttt tcaaaattta
     1921 aagatgagta tttttgatgt gagttttggt aatataatat aataataaac ttaattatat
     1981 gaaacgttat tgtattattt tttaaattgt ttcttaagct gccaacagtg agtttcagag
     2041 actattataa ccattgcata gataagctaa gataatagaa gattattgca ataacagcaa
     2101 aagcaagtac aatataaaat ctattgatta ttagtttaat tttagagatt ataaatttta
     2161 aaagttattt agaattatta cataataatg tattaagtta tactatacaa taattgagaa
     2221 tctaaagtta ttcttaattt taataataaa taacctagaa gatgcaaaac tagacacgtt
     2281 atcaaaataa tcaaaataaa atcgagaaat tttaatcata ttaaataata ataatataat
     2341 atttttttat atttccatat tcctttctta gttaacttat atacctatcc tttcgattta
     2401 ttttatcaaa atattttata tcagtatttt ttaaacagta tttttaattt taatagatca
     2461 tttttattta ttggaaaatt attagttaga ttgatataag aaatttatct atttcaattt
     2521 ttcattaaga tatgctttac aacaattatc tgaacaaaaa gatatgatac ccatgactgt
     2581 actggaatat tttacgcctt caacaaaatt gttaaactcc ttcttacatt tgctacaact
     2641 caaatacatt ttaataatta tacacgtcac agtataaatt catttttttc ctgaaaaagt
     2701 attttctaaa attttctaat tattgtgtag gtagagtaat ctgaaatgaa aaagaataat
     2761 aatttaaaat atctctatat atatatagaa aattattctt cctctttaat tatactatag
     2821 catatagaaa agattagatg tttgaaattt atcattattt ttatgatgta tgattttttt
     2881 tgtattgata ttgttggttc ctcaaaagat accaaaatac agaatgataa tatcaaaaat
     2941 ttactaattg taattaaaga ttttttatct tcttatgaaa aacagataca gactgtattt
     3001 acaggtgatg gagttatcat ctggtttaag gaagattctt tattacctct ccagcttgca
     3061 ttaaaaattc ataaggaatt tcctcaaata ataggaggag aatcatgttt aggattgaaa
     3121 ataggaattg caagaggaga tgcaattgta attgatactg ctaaatcatt agtaggaata
     3181 cctgtttggg gtaatggacc tgcaattgtt agaagattat gtgagctttg tgatgaaggt
     3241 catattctat tggatctcag tgcttatgaa aactttagca ctaaacacaa aaaagaatta
     3301 gaacatattt taccatcgca atcgaacagc aaattctttc aggatttagg tgaatatttt
     3361 gttaaacatc aaaagcctat acatgtattt aatttttgta ataatatacc aaacgatgtt
     3421 atccctattt ttggaaatag taattttcca gaagacaaaa gaggaatgat tgatagaatc
     3481 aatattgatt ctgaattggc tcgcccgttt gatacatttt ttgaatatga aggaattatt
     3541 ttaaaaaaga aaatagatca aggtcaaaaa ataattttgc ttgatgaatc aatgaaaaat
     3601 atgtatcatt cactttttga acatgcaatg aaatatgatt ctataaacac aatgttgcca
     3661 agtatattcc taaagtatca gtcaaatact tcattactaa attatcaagc aagattaatg
     3721 agaagatcaa tgagtcaaaa tgataaaaca ggaagcgtta gaattatgat tatggaaaaa
     3781 tatcgcatag aaaaagattg ggagaatcat aatactagag atgcctgtat agattttctt
     3841 aattggcata aagattgggg tgtgacatta ttacagattg aaccatatta tgctaatgaa
     3901 attagaagaa atattgaaga agctactact tttcaattta aaagtatgga tattggtttg
     3961 tggaaaaata aatatcttat tcaattagac gaatatcaac ttgatgataa aaaggttgat
     4021 ggtagaagat acaatatctg ggtttcagat tctaacacta tatcttatgt taattgtgag
     4081 ttactcatta atacaatact agatcataat gaaatttatg aaataaagca tgacgatgac
     4141 aaacaaaaac cagagtttat caaatggaat cacaattatt ggaaatcgaa ctttagataa
     4201 taattccatt ttttagtaag tctatttcaa atatcttagt tgcagataaa ggataatgat
     4261 aataatatat tataggttga attatgtaga attcaggata cttttataat ggcaaaactt
     4321 aagctataca aaagaaattc taaatttata gatctggcag acctagtagg agaaattagc
     4381 agtggtggtc taatggaagg attgcaaaaa tattataact caccgcttga aaaagaagct
     4441 aaaagtatag ttgcagggcc tagttttttg cagttcctga ataaatcatt tcaaattcaa
     4501 atatcagctg gagatattat aaatttagaa agtgcaagtc acagcaaata ttatatgctc
     4561 tctttatctg gaacatggga cgaaatcata aaattgcaat aatttaactt atattatatc
     4621 taagaagatg acctacactt ttaagactgt gatccaagtt tgaagaaagt gcctcttata
     4681 aaacttatag cgtttgatat gtcagttaag acctcgaaaa atctatcctt t
//
LOCUS       DATIAS010000261         2131 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1544215, whole genome shotgun sequence.
ACCESSION   DATIAS010000261 DATIAS010000000
VERSION     DATIAS010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1544215"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VLA74_05155"
     CDS             complement(<1..653)
                     /locus_tag="VLA74_05155"
                     /inference="COORDINATES: protein motif:HMM:NF016312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HSF50132.1"
                     /translation="MSITLVVSESDPASKSMSIYLEKEKKFVSTQQNDILVSNLYNNI
                     LLYKSKNSLLFTNNLDNKFPNSEVFIFLSKHQSNSKFPTLTCHFTGNFENNRYGGNPY
                     ELGISYPSLQKIYLQHLNEIKEKLYPFAITIEATHHGPTSIKKPIMFVEIGSTEKEWG
                     NITIASLICDCILSVISNPINHQKKIGIGIGGTHYGSKFNNIIINSDIAMGHISSKY"
     gene            788..985
                     /locus_tag="VLA74_05160"
     CDS             788..985
                     /locus_tag="VLA74_05160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50133.1"
                     /translation="MNKRLESGSEDSENSEILTLPNIKYLVEGLEALLQTNLDGEKRS
                     GVINLRDRLISITSSIINDFN"
     gene            complement(1040..1486)
                     /locus_tag="VLA74_05165"
     CDS             complement(1040..1486)
                     /locus_tag="VLA74_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19e"
                     /protein_id="HSF50134.1"
                     /translation="MVVNLKKKRELVARMLNVGANRVRFEPDKLDDIADSITREDIRS
                     LIKNGVIWTAKTKGTSRAGAKAKLQVKKKRGTGTGSKKGKKGARIGKKESYVKKIRTM
                     RYHLKILKSRNDINRDIFWSLYKKVNGGQIRSLSHLRENIREIKSQ"
     gene            complement(1490..1918)
                     /locus_tag="VLA74_05170"
     CDS             complement(1490..1918)
                     /locus_tag="VLA74_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32e"
                     /protein_id="HSF50135.1"
                     /translation="MVINKELLEKRRKVSEHRPKFVRQESWRYDRLAENWRKPKGKDN
                     KMRRQVSGVPPLVKVGYRGPKISRGLHPSGYLDKLVYNIHDLEKLNPKNDAARISRTV
                     GKLKRKEIISRSLELDIKILNPGKLHSKTKKSPESKKQES"
BASE COUNT          659 a          357 c          303 g          812 t
ORIGIN      
        1 ttatattttg aggaaatatg acccattgct atatcagaat ttattattat attattaaat
       61 ttggatccgt aatgagttcc gccaatacca attcctattt ttttttgatg atttattgga
      121 tttgaaataa ccgataagat acaatcacaa attaaagatg caatagtgat gttaccccat
      181 tctttttctg tagaaccgat ctctacaaac attattggtt tttttatcga agttggaccg
      241 tgatgggttg cctcgattgt gattgcaaat gggtataatt tttctttaat ttcattaaga
      301 tgttgtaaat agattttttg caaagatgga tatgaaatcc ctaattcata cggattacca
      361 ccgtatcgat tattttcaaa gttaccggta aaatgacatg tcaatgttgg aaatttacta
      421 tttgattgat gtttagagag aaaaataaaa acttcagaat taggaaattt gttgtcaaga
      481 ttattagtaa aaagcaatga attctttgat ttatacaata aaatgttgtt gtataaattt
      541 gaaacgagta tatcattttg ttgtgttgac acgaattttt tttccttttc taaatatata
      601 ctcattgatt tactggcagg atcagattcg gaaactacta aagtaataga catcgtaata
      661 acaacttttt ttcgataata atattgtttg aaatctaatc ttttactttt atttgtgtaa
      721 tatactatta ttaacaaaaa taaaatggca ccataacgtt taacattaac atgaaataat
      781 tttaaatatg aataagcggt tggaaagtgg atctgaagat tctgaaaatt ccgaaattct
      841 taccttgccc aacatcaaat acttagttga agggttggaa gctttacttc aaacaaatct
      901 agacggagaa aaacgatctg gtgtcataaa tctaagagac agattgatca gcataactag
      961 ctctataata aatgacttta attgattcat acacattaat gaaaaggcta aaagaatgga
     1021 aaatctatgt tatcgtttat tattgtgatt taatttctct tatattttct cgtaggtgag
     1081 acaaggatct tatctgacca ccatttactt ttttgtataa tgaccagaat atgtcacggt
     1141 taatatcgtt cctacttttg agtattttca aatgatatct catagttcgt attttcttca
     1201 cgtaactttc cttcttacca attctagcac ccttctttcc ttttttagac ccagttccgg
     1261 taccacgttt tttcttcact tgtaatttcg ctttggctcc tgcccttgat gtaccttttg
     1321 tttttgctgt ccaaatcaca ccattcttaa ttaaagatcg tatatcttct ctagtgatcg
     1381 aatctgcaat atcatctaac ttgtcaggtt caaatcgaac acgatttgcg cctacattaa
     1441 gcattctagc caccaattct cttttctttt tgagatttac aaccattttt tagctctcct
     1501 gtttctttga ttcaggtgat ttttttgttt tagaatggag ttttcctgga tttaaaatct
     1561 tgatatccaa ttctaatgat ctcgatatga tttcttttct tttcagtttt cccactgtac
     1621 gagaaatcct agcggcgtca ttttttggat ttaatttttc aagatcatga atattatata
     1681 ctaatttatc taaataccca gaaggatgaa gtccccgaga aattttaggt cctctataac
     1741 caacctttac taagggcggt acacctgaaa cttgtctcct catcttgtta tccttaccct
     1801 ttggttttct ccaattctcc gcaagtctat catacctcca actttcttgt ctaacaaatt
     1861 ttggtctatg ttctgatact tttcttctct tttccagcag ttctttattg attaccatga
     1921 gtaagcagtt tagattaatt tacaattttc aataaatatc tttccctact ctgaatacga
     1981 cagacattta aagcaaattt atgttaaata tttcggcgtg tatcacaaag aataataata
     2041 catagcgaga aatagttgat atgaaaaaat atgaattacc cccattacca tataattatg
     2101 atgcactaga accgtatatt gatgcacgta c
//
LOCUS       DATIAS010000262         2280 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1000448, whole genome shotgun sequence.
ACCESSION   DATIAS010000262 DATIAS010000000
VERSION     DATIAS010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1000448"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VLA74_05175"
     CDS             <1..401
                     /locus_tag="VLA74_05175"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF50136.1"
                     /translation="EAITLFDKALEMYPTYTDALLNKGAALYKLGQYQEAITLLNEAL
                     MIDPNHVDALATKGAVLANMDDEKEAIVLFDKALEIDLNSEYAKNLRAITLGTKEEID
                     SDIFFALTPFFILTLIQLMLKIKSLLRRPT"
     gene            531..878
                     /locus_tag="VLA74_05180"
     CDS             531..878
                     /locus_tag="VLA74_05180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50137.1"
                     /translation="MTKRNWSTYNESLIERSHILMDIGFIQSQRKELSKMNKKKVGRP
                     FLYPNSYVEFLAFLKVGFSISYRTVQGIIRGLAEYIKIEEIHFTQLRRRVLRKCIPIL
                     EVSTIIIISKTSL"
     gene            complement(1000..1284)
                     /locus_tag="VLA74_05185"
     CDS             complement(1000..1284)
                     /locus_tag="VLA74_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50138.1"
                     /translation="MEIRQNNIHLCQLGIGIPVISKTKEKIDGRREKILSLANDYKNS
                     HLLSSSKEITDMDEMDIESIIKEREERIREGEEMYKKQMEKAVFFNPQYD"
     gene            complement(1493..1996)
                     /locus_tag="VLA74_05190"
     CDS             complement(1493..1996)
                     /locus_tag="VLA74_05190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50139.1"
                     /translation="MNINQNQPYSKNNNFQDTSYMNIDSYEEVFYLIKLLTKKYIIPN
                     IDTLPENVRFDPNTFYVRIGEKYKRHSLENLYFFPEGFAGPGANFFISEGLRGPSSCE
                     LNEIFDNLYPPQQILDSFYKTLMTFAKDNTRQIQGLRLSLQFMKLILENEEEQRDWIL
                     YKQNQSH"
BASE COUNT          763 a          341 c          327 g          849 t
ORIGIN      
        1 atgaagcaat aaccttgttt gacaaggctc ttgaaatgta tccaacctat actgatgcac
       61 tattaaacaa aggtgcagcg ctctataagc taggtcagta tcaggaagcc ataacgttgc
      121 taaatgaggc attaatgatc gatccgaatc atgttgatgc attagccacg aaaggtgctg
      181 tattagcaaa tatggatgac gagaaagaag cgattgtact atttgataaa gcacttgaga
      241 ttgatctaaa tagtgagtat gctaaaaacc tacgagcaat aacattgggt acaaaagaag
      301 aaatcgattc tgatatcttt tttgcactaa cacctttttt tatattaact ctaatacaac
      361 taatgttaaa gatcaaatct cttctaagac gaccaacata acacttaata cttttaaaga
      421 ttccaagaca ggaatatctt ttcaatcctt cagactggca aattgcttca gatgaatacc
      481 ttaaatcata gtttgtagca ttattatcat gcaatttcat tatcatccta atgaccaaga
      541 gaaactggtc tacatataat gaatccctaa ttgaacgtag tcatattctg atggatattg
      601 ggtttatcca atcacaaaga aaggaacttt caaagatgaa caaaaagaaa gttgggagac
      661 catttttata tcctaatagt tatgtagaat ttctggcatt tctgaaagtt ggattttcta
      721 tttcgtatag gacagtacag ggaattatac gaggcttagc agaatatatc aaaattgagg
      781 aaatacattt tactcaatta agaagacgcg tattaagaaa atgtatacca attttagaag
      841 tatctacaat aataataata tcaaagacaa gtctataatc ctggtgattg atgcttctgg
      901 tcttaccata tctaagaaag gtaattacat tgaagacaag tggaaaaaag aacgcagaga
      961 atatctaaaa ttgtataaag aatattttat ataaaaaaat caatcgtatt ggggattaaa
     1021 gaaaacagcc ttttccattt gttttttgta catttcttct ccttctctta tcctttcttc
     1081 tctttccttt attattgatt caatatccat ctcatccata tctgttatct cctttgatga
     1141 tgataacaaa tgactatttt tataatcgtt agcaagtgac aatatctttt cccttcttcc
     1201 gtcaatcttt tctttcgttt ttgagataac tggtatacct atacctagtt ggcataagtg
     1261 tatgttgttt tgccttattt ccaatgaaag tactatgata tattttttgt ttgatcttct
     1321 ggttttttac ttagttcaag attcaattgt ctgtaaatat ttctttgaag tgtttccatt
     1381 tcgttcatac atttaaggta gtaatcaaca aacccaatcc ttgcaaaatt gtcaattcaa
     1441 gcattggaag tatttttgtc caatgctaat cttttgtatc tttgatatga tgttaatgag
     1501 attgattttg cttatataag atccaatctc gctgttcttc ttcattttct aatattagtt
     1561 tcatgaactg taatgataat cttaaacctt gtatttgtct tgtattatct ttggcaaatg
     1621 tcattaatgt tttataaaag ctatcaagta tttgttgagg tggatataaa ttatcaaaaa
     1681 tttcattaag ttcacaagat gaaggtcctc ttaaaccttc agatatgaaa aaatttgcgc
     1741 ctggtcctgc aaatccttca gggaagaaat aaagattttc taagctatgc cttttatatt
     1801 tttctcctat tctaacataa aaagtattag gatcaaatct aacattttcg ggtaacgtgt
     1861 ctatatttgg aattatatat ttttttgtta ataattttat taaatagaat acctcttcat
     1921 aactatctat attcatatat gaagtatcct gaaaattatt attcttactg taaggctgat
     1981 tttgatttat attcataata tatgtctaga aagagtaaca tataaacatt tcgtttatta
     2041 tttctgtttc tatcaaacat agagatttaa ttaatattat tggaaattga agagctgggc
     2101 atttatgaaa attatattct ctttgaagat aattctaaaa tgttatatgt tttatttcaa
     2161 cttaacaaac taatctttct tttactttta ctatatctat tttattccta tcaattataa
     2221 ctgtaacaag tgttttcttg cattatcgta tgcagtccaa attaaaggtt gaagtaatac
//
LOCUS       DATIAS010000263         2532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1409686, whole genome shotgun sequence.
ACCESSION   DATIAS010000263 DATIAS010000000
VERSION     DATIAS010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1409686"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..792)
                     /locus_tag="VLA74_05195"
     CDS             complement(301..792)
                     /locus_tag="VLA74_05195"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HSF50140.1"
                     /translation="MENPFKHLKKTPRESKAETTLMMLPSDANPKGYVFGGVILKHVD
                     LIAGIVAKRHANQSNIVTASIDRMTFIKPIFIGNSLILEARINYVKRSSMEIEVNIFA
                     EDLDYNIRIHAGKAYVTMVSLDKYGKSMEVPQLLLETEEDHQRFKEGESRMTSRLREA
                     GKL"
     gene            complement(1255..2184)
                     /locus_tag="VLA74_05200"
     CDS             complement(1255..2184)
                     /locus_tag="VLA74_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HSF50141.1"
                     /translation="MKDLKYFIPHDIPQEVLSYEADLSQLGVGKAGKLGAIFLLLEKN
                     DLVNKTVIKEQFSKVPLFTQRALYLEESLPSMAYIYIISPSGGVLQGDRYRIDIQLSK
                     NAIAHITTQGATRLYRMNKNFATQILNITLDSNCYFEYVPDQIIPYRDSRFYQSVNIN
                     LHDTATMIYSETIVPGRMAMGEYFDYDVCYLKTVAKSHNGSLKLVDTALLEPKRNKLK
                     RFGILEEFNMLSNMYILTPSKYIGILTERISGDLIHYEKVVGGCSVLPNDSGITVRIL
                     GNTIDNIKEVIYNILKICRQEIIGAEFSGIRKN"
     gene            complement(2181..>2532)
                     /locus_tag="VLA74_05205"
     CDS             complement(2181..>2532)
                     /locus_tag="VLA74_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSF50142.1"
                     /translation="LIIIESGGDNITTTFSPALADYFIYIIDVAGGDKYPRKRGLGIE
                     NCELLVINKIDLAPYVGADLKIMERDAKLIRKGKPFVFVNCKTGEGIKEVAEHIVKDV
                     LFDLPPKTSIEQLT"
BASE COUNT          875 a          394 c          319 g          944 t
ORIGIN      
        1 gtatttcctt gagcatatgc tgaactataa ttatcgatcg ctgaaatcac aagaactgaa
       61 gcaataatga aaatgctccc aataaaaatt attttctgta tagtatcata atataccata
      121 ttctttaatt atatttcata agtattataa aaaattttag agttattata tatcattata
      181 ttcgtattct atattaagaa ttgaataaga attacaattt tttgataggc aataaaaata
      241 aaataaatac aattaattaa ataattataa aggattaaac aatttcttga gacgagttaa
      301 ttaaagtttt cctgcttctc taaggcgaga tgtcattcta gattcacctt ctttaaatct
      361 ttgatgatct tcttctgttt ctaataaaag ttgaggaacc tccatagatt ttccatattt
      421 atctaatgaa accatggtaa catatgcttt tcctgcatga attcttatgt tatagtcaag
      481 gtcctctgca aagatattga cctcaatttc catagaagaa cgtttgacat aatttatcct
      541 tgcttctaga atcaacgaat tgccaataaa aatgggcttg ataaaagtca ttctatctat
      601 acttgcagta acaatatttg attgattagc atgtctttta gcaactatac cagctataag
      661 atccacatgt ttcaagataa cgcctccaaa aacatatcct tttggattag catccgatgg
      721 taacatcata agagttgtct cggcttttga ttcccttggg gtttttttta gatgcttaaa
      781 tggattttcc aattataaat acctctccaa atatacatta ttatatatat tgaaataatt
      841 tgctattaat gatttaaagg taaagaataa tattatacta tcaaaatcaa tgaaaatgtc
      901 taaatttata aatcctgtta aaaattttaa tttataaata tcttaatcta tttgaaataa
      961 caaatcattt atttaatatt attattctat tattattatt atttgaatgc attagataaa
     1021 agcagacgga aacaaacttc atggtgtcaa gagtgtgata aagtttttga taataaaatt
     1081 gatgctgata ttcataagga aaatgtgaat cacaaagtta aaactataga attctggaca
     1141 atatcacgat aattagaaga tcagatacta ttagtatgca aatctttttt taaattcatt
     1201 gctttaaatt ctttgcataa tttaacagtc taaaaaaaga aaagaaaagg aaatttagtt
     1261 ttttctaata ccgctaaatt cagctcctat aatttcttgt cggcagattt taagtatatt
     1321 ataaatcact tcctttatat tatcaattgt attacctagt attcgtactg ttattccaga
     1381 atcatttggt aatactgaac atcctcctac aaccttctca taatgtatta aatctccgct
     1441 aatcctttca gttagaatcc caatatattt agatggagtt aatatataca tatttgataa
     1501 catattgaat tcttcaagaa tcccaaatct ttttagttta tttctttttg gttccaacaa
     1561 tgcagtatca acaagtttta atgatccatt atggcttttg gctacagtct ttaaatagca
     1621 tacatcataa tcaaaatatt ctcccatagc cattcgacct ggaacaatag tttcagaata
     1681 tatcatggtt gctgtatcat gtaaattaat atttacggat tggtagaatc gtgaatccct
     1741 ataaggtata atttgatctg gaacatattc aaaatagcaa ttactgtcta acgttatatt
     1801 taaaatctgt gttgcaaaat ttttattcat tctatagagc cttgttgccc cttgagtagt
     1861 tatatgagct attgcatttt tactaagctg tatatcaatt ctatatctat ctccttgaag
     1921 cacccctcca gatggagaga ttatatagat ataggccata gaaggaagac tttcttcgag
     1981 atatagagcc cgttgagtaa ataaaggaac ctttgaaaat tgttccttta taacagtttt
     2041 atttactagg tcattttttt ctagtaataa aaatatggct cctaattttc ctgctttccc
     2101 tacacctaat tgactgagat ctgcttcata agataatact tcttgtggaa tatcatgtgg
     2161 aataaaatat ttcagatctt tcaagttaat tgttcgattg atgtttttgg tggtaaatca
     2221 aataaaacat cttttactat atgttctgct acttccttaa ttccttctcc agttttacag
     2281 tttacaaaaa caaaaggctt accttttctt attaatttag catctctttc cattatcttg
     2341 agatctgcac ctacatatgg cgctagatca attttattaa ttaccaaaag ttcacaattt
     2401 tctatcccaa gaccacgttt tcttggatat ttatcaccac cggcaacatc aataatataa
     2461 ataaaataat cagcaagggc aggactaaat gtagttgtta tattatctcc accactttca
     2521 ataattatta aa
//
LOCUS       DATIAS010000264         2972 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1410057, whole genome shotgun sequence.
ACCESSION   DATIAS010000264 DATIAS010000000
VERSION     DATIAS010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410057"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1175..2377
                     /locus_tag="VLA74_05210"
     CDS             1175..2377
                     /locus_tag="VLA74_05210"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSF50143.1"
                     /translation="MLYDDSSFIIYGQPDIKTTKSRDMVIDLGNGIKTNARLSIPIIG
                     NGPFPGVLLVQGSGAIDMNIRPSVQIAEYLSERGFEVLQYNKRGIGEINTILDSNVWG
                     NITFNDLQQDAEKALYVLIQQPEVDANRITILGHSQGATITPRVAIDNPDKVKNIVLM
                     GAVAQNLSKIIELQGVTTPVLYAKEVLDHDHDGLFSLEEAKKDPIFRDMVLVGNVIMN
                     LTQQQNTTITTSNYTITPTPLLSSLSEQQQQLRSEYNKNNDVYVSIDNELKPKLLDII
                     QSFLVATPGMKCIDVNICPIWIKSEYALQPNLNIIGNVSSNTSILILHGENDIQLPVQ
                     QALLLQQKLIDVRHPDHTLITYPDLGHFFYPSSQWFTEVGPIQENVLKDLYSWLESHS
                     GFTSISTH"
     gene            complement(2707..>2972)
                     /locus_tag="VLA74_05215"
     CDS             complement(2707..>2972)
                     /locus_tag="VLA74_05215"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50144.1"
                     /translation="HRSKKTINTITRYHPRIVLVFLPTRSPHLNLIEIRWLWMQRQAI
                     NNYTFRNESDIGKAVFDWTCNYNEKHGRRITDVLQIGVMNMTT"
BASE COUNT         1059 a          448 c          432 g         1033 t
ORIGIN      
        1 gttatcaata acgtcaaaat ctagtaatac ctcacctctt tttactagag attcattgta
       61 atttctccag ttcacataat atgactagaa taggttagct aaatgtgtta ggaagaggga
      121 attacgcaac aaagcattta caactagtag ttacatttct cttggatcag cattgtactt
      181 taaagcatgt agacttgatg atgatatcag aataaagcta tgtgtatatc gtcaaataac
      241 taaaaatagt aattgtaaac agcaagcttt tagagatagt tcccaataat attgatacag
      301 taaatactaa aggtgcttcc ctgattggta ttggtaaata ccaagaagca atacaatatt
      361 acgacaacgt attagagata gatccaaatt atctagctgc attatataac aaaggtcttg
      421 tattatctag tcttggtaaa tacaatgaaa caatggaact tgctgagaac attaagattt
      481 aattggcatt aattcctgaa actaattata attataaacc actaattcgt ctattttgag
      541 attcaattaa gatgataaaa tttgtatgtt ttactcttct attacatttt atacttgata
      601 caagattgtt tcatggcgtc tgaggatatg aaaataaaat ttatacttta ttcttaaaga
      661 aattttaaca tcaaatgtat ctgttattag agaaattaca ttaatgtatt tgagattatt
      721 ctaattgttt taataaaaaa aaagataaat atcactagaa taagggataa ccaaagatgt
      781 aaaaacttca atgtatttga catacaagaa ttttttcttt actatttttg aattaatgaa
      841 tatttcttct tttatattta tcctcttaga cgatctatat taaactctgg atcaccatat
      901 tcggacactt ttgattttct ttcatgtact cttttatgat tttccaagcg tcttttatct
      961 tcaaaggtca tattacattt tttgcatttg aaagatgaca attatgagat acaacagaca
     1021 aatagtaaaa ggtaaataaa tacattatgg ctgattttgg ataatcatac tagatcagat
     1081 atcaaatgtc ttatatagtc tctatttacc gatatatata ttgaaaattt ttctgatatt
     1141 tccaataatt ctttctcttt attctcttat tttcatgtta tatgatgata gtagttttat
     1201 tatttatggt caaccagaca ttaagacaac aaaatctaga gacatggtaa tagatttagg
     1261 taatggtata aagactaacg cacggctgtc aattcctatt attgggaatg gaccatttcc
     1321 aggtgtcctt cttgtgcaag gatctggtgc aattgatatg aacattagac catcagttca
     1381 aatagcagaa tatctttcag agagaggatt tgaagtatta cagtataata aaagaggtat
     1441 aggtgaaatt aatacaatct tagatagcaa tgtatgggga aatataacat ttaatgatct
     1501 acaacaggat gcagaaaagg ctctgtatgt tcttatacaa caacctgaag ttgatgcaaa
     1561 tagaataaca atattaggac atagccaagg tgcaaccata acacccagag ttgcaattga
     1621 taatccagat aaagtaaaga atattgtact tatgggagca gtagcacaaa acctgagtaa
     1681 aataatagag ttgcaaggag taactacacc agttctatat gctaaagaag tactagacca
     1741 cgatcatgat ggattatttt cattagagga agcaaaaaag gatccgattt ttagagatat
     1801 ggttctggtt ggaaacgtta tcatgaacct tacacaacaa caaaatacta ctattactac
     1861 ctctaattac acaatcacac ctacaccttt attatcatca ttatcggaac aacaacagca
     1921 attacgttcc gaatacaata aaaataatga tgtatacgta agcattgata atgaactcaa
     1981 acccaaactt ttggatatta ttcaatcatt tttagttgcg acaccaggta tgaagtgtat
     2041 cgatgttaat atatgtccta tatggataaa atcagaatat gctttgcagc ctaatttgaa
     2101 tataattggc aatgtttctt ctaacacaag tattttaata cttcacggag aaaatgatat
     2161 acaacttcca gtacagcaag cacttctttt acagcaaaaa ctaatagatg taagacatcc
     2221 tgatcataca ttaataacgt atccagatct tggtcatttc ttctatcctt catctcaatg
     2281 gtttactgaa gtaggtccaa tacaagagaa tgttttgaaa gatctttatt catggcttga
     2341 atctcactct ggttttactt ccatttctac tcattaatgt ataacatttt agaaaaaata
     2401 tttagaaaca ggataattgt tcttatttat cactactatc gtaaaacttt gataatgaac
     2461 aaaaaattga agaccaagta tttatcaaaa ttacctcaac cttttaaaga ttgtatcatt
     2521 gctatataca tatggtagaa ccatcagaag caaatcctac tgatattcac attatctgat
     2581 tctgaaatgt tttttataat aaatcccttt tcttaacttg attataggtt gttagaatat
     2641 taaaaatagt ataattccat gaacagcagt aatgggttca aatccaattt aattattact
     2701 taacagttat gtagtcatat tcattactcc tatctgtaag acatcagtta tccttctacc
     2761 atgtttctca ttgtagttac aagtccaatc aaatactgct tttccaatat ccgattcatt
     2821 tctaaatgta tagttgttta ttgcctgtct ctgcatccat aaccatctta tttctattaa
     2881 atttagatgt ggtgatcggg taggaagaaa tacaagaact attcttggat ggtagcgtgt
     2941 aattgtgttt attgtctttt ttgacctatg ta
//
LOCUS       DATIAS010000265         4611 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1001088, whole genome shotgun sequence.
ACCESSION   DATIAS010000265 DATIAS010000000
VERSION     DATIAS010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4611
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001088"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(566..871)
                     /locus_tag="VLA74_05220"
     CDS             complement(566..871)
                     /locus_tag="VLA74_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HSF50145.1"
                     /translation="MTANIENTGNVKRSNEIFIGKKPLMTYVTATLVQLANEPLVVIK
                     ARGKSIPRAVDVSQIIVKRMDTLGYKVNSVKIGSESVKSEDGRIRNVSTIEVAVSRN"
     gene            complement(909..1157)
                     /locus_tag="VLA74_05225"
     CDS             complement(909..1157)
                     /locus_tag="VLA74_05225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50146.1"
                     /translation="MDEPITINQEGIKLKPEIMIKEELYHCIFQNRVFLFYKDNDDIL
                     HCYEVGDPNVITKIRDNPNSISDIFNEIVEESNKNIKS"
     gene            1274..2410
                     /locus_tag="VLA74_05230"
     CDS             1274..2410
                     /locus_tag="VLA74_05230"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HSF50147.1"
                     /translation="MTFRYFDVLSENSDIRIIFHIDFDYFFAQCEEIRNPSIKNFPVI
                     VCVYSGRTSDSGVVSTSNYVARKYGVKSGISIREAKSKLSSVNNPVFLPIDQKYYSEI
                     SNKAMNIIKSVVDKCEIVGLDECYVELTEFLNGDFSKAVEIAQMLKTKLYEKIHISCS
                     IGISYNKLLAKIGSKYQKPSGLFLMEPKKSINFISDLDISLIPRIGPKNKKKLHEMGI
                     KTFKDISVANTDMLKKEFGSACSNYLCNSARGINYDPVKSDNNIKQIVRIKTLKENSH
                     DVEYFKFELHKLCNSILEKLIQRNLLFKTLALIFISETLEIKTKSRTLKIPSQDPHEL
                     FINAEIILNDFISANQDVHIRRLGIKVLDLKDKSGQSTLLNFIE"
     gene            complement(2447..4156)
                     /locus_tag="VLA74_05235"
     CDS             complement(2447..4156)
                     /locus_tag="VLA74_05235"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HSF50148.1"
                     /translation="MNLINYFPFNTIRERQKNVIQKIEEEIENGIKYIFLEAPTGFGK
                     SPIAIALARYLGSSHICTSTKDLQNQYSKDFPFVREAKGKRNFMCLLKQNEGISETCE
                     YGPCQKEEEFDCNYKTRLLDYKVSGIGTKFEHAGIGQMEKMKYIRKHDSQLRFEKINW
                     EPCYYFHQKWIAIKSSHTIYNYKYFLSDLYFSNNIVKRDLIVFDEVHNIESEISDFKS
                     FTINGDLISKMFPSLKLPHKKEEEIETWIGFCEDYRDHILHFIEDAQMAIERNDLREP
                     HTEKNLIDFINREKNISQVLNDMKRHKSNWLVTNIDRAVDNSIRKITITPLDIANYFK
                     EILENSSYGLFMSATILNKDYLSKISGLPEDKITFIRIKESDFPKENRPIHLMNVAWL
                     NSKTITSNLPPIAKAIDNIMSIHKKEKGIIHTTSYFQLNYIKNNLSTQNKMRLIETGP
                     NIDRTEILQKHFKNKNPTVLISPSLYYGLDLKDDLSRFQIITKVPYPDLSDRKVSTMR
                     KKDMNWYLWNTVIKVVQAYGRSVRSKEDHASTYILDSNISYLLKNAKEMFPQWFTEAI
                     IQR"
     gene            complement(4252..4449)
                     /locus_tag="VLA74_05240"
     CDS             complement(4252..4449)
                     /locus_tag="VLA74_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50149.1"
                     /translation="MGGISKKGRIFLGKRVGPKSARRARKPLSEDWTTGRVLNRHFVN
                     RRKNKKPTRRDRNYSYSHYSY"
BASE COUNT         1502 a          707 c          648 g         1754 t
ORIGIN      
        1 atctggtttt aattatatat agcattaatt tatccgatat aaattcaaat aatactgcaa
       61 cagaatgttg aaattcatga tttttcacaa tgatatatat attctttaga ctgtagcaag
      121 aaattcctaa aggtctggac attcataaaa atttagaata tttttctttt cattttgaat
      181 aagaataata agctgtaaaa atatgattca gttacaaaat aagtctttaa ataactcttt
      241 tactttgttt ataatgataa acttaaatga acatttaatg ttaccttaaa gtaaaacaaa
      301 tatgttaatg cgtgccccaa aataatcttc caaattctaa tttaaatttt ttataaaatc
      361 agagataaac catattcaaa ataaataaaa acttgtatat aagatatcat aaaaattatc
      421 taaaaataat gaagttttgt attgttatga gcacagcatt agaaaaatat taacaataat
      481 aaattcaaca aaccataagt attgaatata aataaattat aaaaactaga aaattaaata
      541 caaaaaacaa aaaaactttt aggatctaat ttctagaaac agctacttcg atggttgaaa
      601 catttctgat tctaccatct tcggatttta ctgattcgga gcctattttt acagaattta
      661 ccttatatcc aagtgtatcc attcgtttca caatgatttg agatacatct acagctcttg
      721 ggatactttt gcctcttgct ttgatgacta caagcggttc gttggccagc tgtactaatg
      781 ttgctgtgac ataggtcatc aatggcttct tgccaataaa aatctcatta cttctcttta
      841 catttccagt attttcaata tttgcggtca tgcttataat aactcatcta atgtggaata
      901 taatgttttc aactcttgat atttttgtta gactcttcga ctatttcatt gaaaatatca
      961 ctgatgctat tggggttatc cctaatcttg gtaatgacat tgggatcacc tacctcataa
     1021 caatgaagga tgtcatcatt atctttgtaa aaaaggaaga ctctattttg aaaaatacaa
     1081 tgatacaatt cctcttttat cattatttca ggctttaatt tgataccctc ttggttaatt
     1141 gtaatcggtt catccaatga tagatcaatt ggtttcgttc tagaaaagta tatctaaccc
     1201 tgatacatga gtaattattt ccacaaatat tataactgtg acttttattt acattaatca
     1261 atgaattgtt ttcatgacat tccgatattt tgacgtatta tctgaaaata gcgatatcag
     1321 aattatattt cacattgatt ttgattattt ttttgctcaa tgtgaggaaa tcagaaatcc
     1381 atccattaaa aattttccag taatagtgtg cgtgtattct ggaagaacaa gtgatagcgg
     1441 agtagttagc acatctaatt atgtagcaag aaaatatggt gtaaagtctg gaatctcaat
     1501 tagggaagcc aaatcaaaat taagttctgt caataatccg gtttttcttc caatcgatca
     1561 aaaatattat tcggaaattt ctaacaaagc catgaacatt attaaatctg tagttgataa
     1621 atgcgaaatc gtcggccttg atgaatgtta cgtagaactt accgaatttt taaatggaga
     1681 ttttagtaag gctgtagaaa ttgctcaaat gttaaagaca aaactctatg aaaaaattca
     1741 tatctcctgt tcaataggca tatcttataa taaactctta gcaaaaatag gttcaaaata
     1801 tcaaaagcca agtggtttgt ttcttatgga accaaaaaaa tctataaatt tcatttcaga
     1861 tcttgacatt agtttgattc ctcgaatagg gccaaaaaat aaaaaaaaac ttcatgaaat
     1921 ggggataaag actttcaaag atatttctgt tgctaatacg gacatgctta aaaaagaatt
     1981 tggatctgct tgttctaatt atttatgtaa ttccgcacgt ggtataaatt acgatcctgt
     2041 aaaaagtgat aataacataa aacagattgt tagaataaaa accttaaaag aaaattctca
     2101 tgatgttgaa tattttaaat ttgaactaca caaattatgt aactcaattc tagaaaaatt
     2161 aattcaaaga aatttattat ttaaaacttt ggctttaatt tttataagcg agacgcttga
     2221 aatcaaaaca aaatctagaa cattaaagat tcctagtcaa gatccccatg agttattcat
     2281 taatgctgaa attattttaa atgattttat ttcagctaat caagatgttc acataagaag
     2341 attgggtatt aaagtgttgg atcttaaaga taaatctgga cagagtacgc ttttaaattt
     2401 tatagagtaa cctttactat gcaaatttta tatacttttt tatattttat ctttggataa
     2461 ttgcttcggt gaaccattga ggaaacattt ctttggcatt tttcaaaaga taacttatgt
     2521 tactatctaa aatatatgta ctggcatgat cttctttact ccttacgctt cttccatacg
     2581 cttgtactac tttaataaca gtattccaaa gataccaatt catgtctttt tttctcatcg
     2641 tagatacttt cctgtcactc agatctggat atggaacttt agtgattatt tgaaacctag
     2701 ataaatcgtc tttaagatca agtccatagt atagggaagg tgaaatcagg acagtgggat
     2761 tcttattttt aaagtgtttt tgtaatattt cagttctatc gatatttggt ccggtttcta
     2821 tcagcctcat cttattctgc gtactcaggt tattcttgat atagtttaat tgaaagtagg
     2881 atgttgtatg aataattcct ttttcttttt tgtgaatact cattatatta tcaatagctt
     2941 ttgcgatagg gggaagattt gacgttattg ttttgctgtt tagccaagct acattcatta
     3001 gatgtatggg tctattttct tttgggaagt cagattcttt tattctgata aaggtaattt
     3061 tatcttcagg aagaccagaa attttactca aataatcttt gtttagaatg gtcgcactca
     3121 tgaacaatcc gtaggaactg ttttcaagaa tttctttaaa atagtttgca atatccaaag
     3181 gcgtaattgt tatttttcgt atagaattat cgacagctct atcgatattt gttaccaacc
     3241 aattggactt gtgccttttc atgtcattta gaacttggga aatatttttt tctctgttga
     3301 tgaaatctat aagatttttc tcggtgtgag gttctcttaa atcatttctt tctatagcca
     3361 tctgggcatc ttctataaag tgaagaatat gatctctata atcttcacaa aaacctatcc
     3421 atgtttctat ctcttcttct tttttatgag gcaatttgag acttggaaac atttttgaaa
     3481 taagatcccc atttattgtg aaactcttga aatcagaaat ttctgattct atattatgga
     3541 cctcgtcaaa aactatcaaa tctcttttca caatattgtt agagaaatat agatctgata
     3601 agaaatattt atagttgtaa atggtatggg atgattttat tgctatccat ttctgatgaa
     3661 aataataaca tggttcccag ttaattttct caaatcgaag ttgtgaatca tgttttctga
     3721 tatatttcat cttttccatt tgacctattc ctgcatgttc aaattttgtt ccaataccgc
     3781 ttaccttgta atctagtagt ctagtcttat aattgcagtc aaattcttct tctttctgac
     3841 aaggtccata ttcacaagtt tcacttattc cttcattttg ttttaacaaa cacataaaat
     3901 ttctctttcc ttttgcttct cttacaaagg gaaaatcctt agaatactgg ttttgtaagt
     3961 ccttggtcga agtacaaata tgagaacttc cgaggtatct tgctaatgca atggcgatag
     4021 gactctttcc aaatcctgta ggtgcttcca gaaatatgta tttgattcca ttttctatct
     4081 cttcttctat tttttgaatg acattctttt gtctttctct tatagtgtta aatgggaaat
     4141 aatttattag attcattctt tttttatttc agtctttaga ttctagtgga tttccgatat
     4201 atctaattat ggattatcct taaacagctt tttttgataa tcaacaccta atcaatatga
     4261 ataatgtgaa taactataat ttctatccct tcttgtgggt ttcttatttt ttcttctatt
     4321 gacaaaatgt ctgttaagca cccttccagt ggtccagtct tcgctcaatg gttttcttgc
     4381 acgtcttgca gatttgggtc ctaccctttt tcccaaaaaa attctgcctt tttttgatat
     4441 gccacccatt tctacatgca actataaact ggataatctt attaattctt tgtttcatgt
     4501 ttgcgattta attataaatg atttgtcatt caagaaaaat ctcttccgta gtctttttca
     4561 aatcgactga gttattgatt ttgtcatgga taattaacaa cacatcttca a
//
LOCUS       DATIAS010000266         2571 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_456688, whole genome shotgun sequence.
ACCESSION   DATIAS010000266 DATIAS010000000
VERSION     DATIAS010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456688"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..372
                     /locus_tag="VLA74_05245"
     CDS             76..372
                     /locus_tag="VLA74_05245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50150.1"
                     /translation="MKKEYYSGKRKRHTLKIKYIIVNKEGKILHKSKYQKGKNYSYYV
                     YKDEPPITLPLIKNYFDIGYEVIENYFPNLTEILPLKKDNIEHTEKEEKQQKTS"
     gene            complement(585..1190)
                     /locus_tag="VLA74_05250"
     CDS             complement(585..1190)
                     /locus_tag="VLA74_05250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50151.1"
                     /translation="MDIASLLWKLRKYNSLLWALFNSSVAFLSAFLFVILFSLSSLHP
                     IIIVIITFSFHIPTTAWVEYYMRLRKYSKDPISIYHIRQFVSQDLKWIGISYIILFSI
                     AYPLLFILHWLALPILFILYIILPIYLRKKAIKKMQPLDENDDKKFLSRQLIWNIILF
                     PLLGFVSDQIGTVIIESTPLYFGFPIAFLIFILTQWISTSK"
     gene            2071..>2571
                     /locus_tag="VLA74_05255"
     CDS             2071..>2571
                     /locus_tag="VLA74_05255"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50152.1"
                     /translation="MNKVKVGEPFHYLNSFLLLLGYARVYFHLPYRQTEGIVRAHAEN
                     KIPSIPDYSTIDRRINKLDIHINNNKLGGNDVILAIDSTGIKVTNRGEWMHHKWHYKS
                     KKGYLKIHVAVDINNKNNKIKILSLNVTTEKVHDSKVLPILVHDIARKQNIDVSTVIA
                     DGSYDNN"
BASE COUNT         1061 a          336 c          382 g          792 t
ORIGIN      
        1 agaacatact ttccaagatt taaatggttt ataaacgcaa caaaacaaga gattccaaga
       61 ccgaacgaca agtagatgaa aaaagaatac tattctggca agaggaaaag acatacctta
      121 aagataaagt atataatagt caacaaagag ggaaagatat tacataaatc aaaataccag
      181 aaaggaaaga attatagtta ttatgtctac aaggatgaac ctccaataac attaccactg
      241 attaaaaact attttgatat tggatatgaa gtaatagaaa attattttcc taaccttaca
      301 gaaatattac cattaaaaaa agacaatatt gaacacaccg aaaaagaaga gaaacaacaa
      361 aagacatcat agacagaaag taattgtaga acatgctatc tgtagaataa aaaaatttga
      421 catcatgcga aacaaaacag gaaaagacta aagagatagg atgaaatatc tgatattgtt
      481 tgtggtttgg tcaattatag aataatatac actacaagat aatcgatatt gattacaggt
      541 aaataaatcc tagattttat ctaattacgc aaaagatcat atgattattt tgaggttgag
      601 atccactgtg tcaatataaa tattagaaat gctattggga aaccaaaata aagaggagta
      661 ctttctatta taacagtacc tatctgatct gaaacgaagc ctaataatgg aaacaatata
      721 atattccata ttagttgcct tgacaaaaat tttttatcat cattttcatc taatggttgc
      781 atttttttta ttgccttttt tctgagatat atcggtaaaa taatataaag tatgaaaaga
      841 ataggaagag ctaaccaatg aagaataaaa agcaatggat aagcaatgct gaataaaatg
      901 atataactga tgccgatcca ttttaaatct tgagaaacaa attgtctaat atgatagatc
      961 gatataggat ctttactata ttttcttaat ctcatataat attcgaccca tgctgtagtc
     1021 ggtatatgga aagaaaatgt aataataaca attataattg gatgtagaga tgatagactg
     1081 aataaaatta caaataaaaa cgcacttaaa aaagctaccg aggaattaaa cagagcccag
     1141 agcaaagaat tgtattttct taatttccat aacaatgatg caatatccaa catttaacta
     1201 ttacaattaa ataacaatta ttattattat aaataatcct attgtacgag cactaatgga
     1261 gcaggagtaa ggaacagagg aggcttacta ccaataatca tacactcgac cactaaaata
     1321 aatggtaatg aaatcgtaaa cgaaaaggca ttaatgaaga ttaaagcagt ggcgggagag
     1381 acttttcaag attgatgtaa cagacaaaaa tcaagccaat aattaatttt agtttggaat
     1441 cattttataa tgataagtat tttcaaactc attgaaaatc agctaatgaa gacacttaaa
     1501 catccaaagc attttaaagt ggtactatta tccttgtggt tatcataatt tctaatatag
     1561 atcttaatac atgaggctct taatttaaga taatattcac ctcctttaac cgaaattttc
     1621 attattattt gttattgtat cattatacat tgaaacaaag aattgaatcc agttatgtat
     1681 atgaaataag ttatatattc ctcttgtcta cacagataat agccatcaaa tctttttatc
     1741 tgtctttgtg aaaatataat attttcacaa aattaagttt caaaaattaa tactcttgtg
     1801 attggtaatg taagtcaaga aaattttcgg ctactaaaaa tttagtagta gatcatttaa
     1861 aaaaaaattt agtaattgtt tttcgtaata ttcactttta ttgtaaaata tgctttgttg
     1921 catgattctc tactgctaat ctatttagct aacatattgt agtcatatca tgtgataaac
     1981 tggagaaaat ataatcgatc tcttgttaaa cgtggagaaa ttatgcttgg atttgatatt
     2041 atagataatt gagataatga actcaaagaa atgaacaaag ttaaagttgg agaaccattt
     2101 cactatctca actcatttct attattactt ggatatgcaa gagtatattt tcatttacca
     2161 tatagacaaa cagaaggtat tgtaagagct catgctgaaa ataaaatccc atcaattcct
     2221 gactatagta ctatagatag gagaataaac aaactagata ttcatattaa caacaacaaa
     2281 ttaggaggca atgatgttat tttagcaatt gattctacag gaataaaggt aacaaataga
     2341 ggagagtgga tgcatcataa atggcactat aaaagtaaaa aaggatatct taagattcat
     2401 gtagctgtag atataaataa caagaataat aagataaaaa ttctatctct aaatgttact
     2461 acagaaaaag tacatgattc caaagtatta cctatactcg tgcatgacat tgccagaaaa
     2521 cagaatatag atgttagtac tgtgatagct gatggttcat atgataacaa c
//
LOCUS       DATIAS010000267         2566 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1273306, whole genome shotgun sequence.
ACCESSION   DATIAS010000267 DATIAS010000000
VERSION     DATIAS010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1273306"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(936..2405)
                     /locus_tag="VLA74_05260"
     CDS             complement(936..2405)
                     /locus_tag="VLA74_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50153.1"
                     /translation="MNIVKTRTKKSSAIFLIIVFFAGTFALSLSPSFIIGKVQGEAEY
                     GYKYYNSEYYPPAYESNGYPPKDPSPDIIVPSIDFPRIQEAINEANEGDVIKVLPGTY
                     TEQLNIAKSLTIIGSGAKATIIEAPLALEDLDTNVIGRPYIVEVNNEAEVTMKGFTIK
                     GLEDAICDVLFGVTVLGDATLKLDSAVIRDCTFAGIVVGISLTSANSQIGHATITNTV
                     ITDYQKFGAYADGSGSTLTMSYNKIVGSNYEAFDTDEIDISPNLIGVYFTNVAKATIT
                     HNEVRGNICILPECGPDWFNQFQAAGIGFCNKSFLSSTSDILPMNLQQENPNERCTYI
                     NGTLTNGPFIAPMIDVQQENSNEIDSFMSIPTIISLNTNVAGNTVAGSIIYNNYLSNN
                     DVGISLTGEESGCCVIDHNRLTDNRFFGIAVADGEHTVSNTKIFGGNIAVAAIATNAN
                     TVATLDRVKIVDAEIPVQALSSGEFTAAVNVVSPYFFAP"
BASE COUNT          882 a          399 c          390 g          895 t
ORIGIN      
        1 acataaacaa aacttttaga attaacgcat aagaggcgag atagagataa aattctagaa
       61 tgagactaga aactttataa aatttgtttc tgatacaatt tgacaagatt agcatacaat
      121 gtataatatg atctcaactc aagatgtaaa atgtttttca gataccaata aacaaaattc
      181 aaatttgtgt aaatctctag tataaacaat aatatcaatt tcaattaaaa tgattgattc
      241 ctgtgttagg acaaaaattt aggttaaatt tgtttgatat tctactggtc ccattctata
      301 aaactaggga cattttaatg tagtttaatt tgaattttgc aactatttta taatttgttg
      361 tttttgattg tatgaataga gatattgata gtggaaaact ctgatgaatc aagcacagat
      421 gtagaagcct cattctcttg tgaaaattgt ggtcgatcat ttaactctag acaagagttg
      481 aacgagcact catcatctcg acatttaaat ttttctgatt tttaaaagat tataaccata
      541 acttgttatt tttatcgttg tttttatatt aaaacaaaga tcctactaaa taataaacct
      601 ggagatagca tagttattga tacaatatgt tttaaaagaa ataacatatg tatttttagt
      661 ttttttctta aatattattt ttaatctcta tggatagatg aagttaatta gtattatatc
      721 taccaattat tgacagacaa ttataaatcc tcccctttaa gtcagacctg tttcacaaac
      781 cactgatcct atatattata aggggacacc aggaatgaca atttattgtt agaaagttca
      841 atcaacttta aatttattag attattctag taattgattc gatactttca atatactact
      901 ggataattac attcaaaaaa atgagatatt gtcaatcacg gtgcaaagaa atatggagag
      961 actacattta ctgctgcagt aaactcacca gatgaaagtg cttgcacagg aatttctgca
     1021 tccacaatct tgacacgatc tagtgtggca actgtattag catttgtggc tattgctgct
     1081 actgcaatat ttcctccaaa gattttggta ttagaaactg tatgttcacc atctgctact
     1141 gcaattccaa agaaacggtt gtctgttaac ctgttgtgat caattacaca acatccactt
     1201 tcttctccag tcaaactaat gccaacatca ttatttgata aataattatt gtagattata
     1261 gaacctgcaa cagtattacc agcaacattt gtatttaaac taataattgt tggaatagac
     1321 ataaaagaat caatttcatt tgaattttcc tgttgcacat ctatcatggg agctatgaaa
     1381 ggaccgttag taagtgttcc attaatgtaa gtacatcttt cattcggatt ttcctgttgc
     1441 aaattcatgg gcaggatatc tgaagttgaa gataagaagg atttattaca aaaacctatt
     1501 cccgctgctt gaaattgatt aaaccaatct ggaccacact caggaaggat acagatattt
     1561 cccctgacct cattatgagt aattgtagcc ttggcaacat tggtgaaata gacgccaatg
     1621 agattgggag agatgtcaat ctcgtctgta tcaaaggctt cgtaattaga cccaactatc
     1681 ttgttgtaag acattgttag tgttgagcca gaaccatcag cataggctcc aaatttttgg
     1741 tagtcagtga ttactgtatt tgtgatagtt gcatgtccaa tttgtgaatt agctgatgta
     1801 agtgaaatac caactacaat accggcaaaa gtacagtccc tgataacagc agaatctagt
     1861 ttaagagttg catcacctaa tacggtaact ccgaataata catcacaaat ggcatcctcg
     1921 agacctttaa tagtaaatcc tttcatcgta acttcggcct cattgttaac ttcaacaata
     1981 tatggtcgtc cgattacatt ggtatctaaa tcttctaatg ccaatggtgc ttcaattatg
     2041 gtagcctttg cacctgagcc tataattgtt agacttttag caatattgag ttgttcagta
     2101 tatgtaccag gtaatacttt gattacatca ccttcatttg cttcatttat tgcttcttga
     2161 attctaggaa aatcaattga tggaacaata atatcaggag acggatcttt tggcgggtac
     2221 ccattcgatt catatgctgg tggataatat tctgaattgt aatacttgta tccatattcg
     2281 gcttctcctt gtactttgcc aataataaac gaaggagata aagataaagc aaatgttcca
     2341 gcaaaaaata caattattaa aaatattgca ctactttttt ttgttcttgt ttttactata
     2401 ttcaatattt agtaatatta aactaaaata tatctgaaat acgtatgatt ctaaaagatt
     2461 taataaagag gaattttaaa tagttaattt tttgaaaata attattataa cataattaaa
     2521 aactttcttt ttattagtaa atatctaata atttactata ttaata
//
LOCUS       DATIAS010000268         2245 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1001574, whole genome shotgun sequence.
ACCESSION   DATIAS010000268 DATIAS010000000
VERSION     DATIAS010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001574"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VLA74_05265"
     CDS             complement(<1..262)
                     /locus_tag="VLA74_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50154.1"
                     /translation="MTNENLSEEELNNIKKLERSLKKDSKFIKIEPNTNKTLRFILSE
                     EMGPVTNNFNEKPFQQYRFIAIEENTDNIKRWFDVGKRSAEAI"
     gene            complement(571..>2245)
                     /locus_tag="VLA74_05270"
     CDS             complement(571..>2245)
                     /locus_tag="VLA74_05270"
                     /inference="COORDINATES: protein motif:HMM:NF012704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50155.1"
                     /translation="NRRYRINILIIGDPGLGKTLSLKRIIKLVPNSRYESSQNSSGKS
                     LTAIISKEDENYILRLGPVPLAKWAICALNEFGRLDPEDQGHLLDVMEEGEFTINKHG
                     INAKIISPTTIIASANPVNNSSWSDDLKINLNEIPALKPIIDRFDLIFVVRIPNDENV
                     IRRYTYMKSLQEDSLIPDYSNYLKKHIAYAKRFNPIFSEEAKSILDEFFIRLISKNKN
                     KNKKDVFNSPRRRDSIYRIAKAISKLNLKNVVDVDDAKDAIEFYNVVLLELERTVSAP
                     EDPRDVAYKECISILQNLKDFGGITLDDLFKKACERNMQVHQYFGINKSLKIEHNSKT
                     RVVYDMLLNHTNIKRVQDKPIVLQWISSSSSPTILPNSNNNNSSVESNNIAKSLQNGK
                     SSFLSDISDTSDSQKLDFNKNSDSYCCNDNNNIESRNDNNTTNKINTNLSDISDTSDS
                     QTLQNSSEILFSNSTRFILNNKKSVSDISDVSDSNIDQTTRIYNNPLISEADLDNGDY
                     YPEIINNISKYEGSDYWFCYNCKWKGDKWFMMKHPCNNNKKKTGRKKLL"
BASE COUNT          686 a          321 c          290 g          948 t
ORIGIN      
        1 atattgcttc tgcagatctt tttccaacat caaaccatct ttttatatta tctgtatttt
       61 cttctattgc gataaagcga tattgttgga atggtttctc attaaaattg tttgttactg
      121 gtcccatttc ttcagataga atgaatcgta atgttttatt agtatttggc tctatcttga
      181 taaacttgct atcttttttt aaagatcgtt ctaatttttt gatattgttt aattcctctt
      241 cactcaaatt ttcatttgtc attttttatg tttctccatt ttactttttg ttttgctata
      301 accataatat gtatttcata tatggtcaca tatatacttt acgtatttta tttactttat
      361 attaatacat tttgttaata aatttggtag tgtaataaaa cagaataaaa atattattat
      421 ataacatgaa aaacctgata atagatagtc atatatatgt cttaatttta agaacaattg
      481 ttcattcaaa aagatttttt atataatctt ctatattgtt atgagtccta aactgtcaat
      541 attaagtttg catgatattt taagttttaa ctagagcaat ttttttcttc ctgtcttttt
      601 tttgttattg ttgcatggat gtttcatcat aaaccattta tcacctttcc atttgcaatt
      661 atagcaaaac cagtaatcgg atccttcata tttgcttatg ttatttataa tttcaggata
      721 gtaatcacca ttatctagat cagcttcaga aattaaagga ttattatata ttcttgtagt
      781 ttggtctatg ttgctatctg atacatctga tatatctgat actgattttt tattatttaa
      841 aataaatcgt gtactattag agaataaaat ttcacttgag ttttgtaagg tttgactatc
      901 agatgtatca gatatatcag atagatttgt attaattttg ttagtagtat tattatcatt
      961 tctactttct atattattat tgtcattaca acaataacta tcagaatttt tattaaaatc
     1021 taatttttga ctatcagatg tatcagatat atcagataga aaagagctct taccattttg
     1081 taagctttta gcaatattat ttgactctac agatgaatta ttattgttac tattaggtaa
     1141 gattgttggt gatgatgatg atgatatcca ttgtaataca atcggcttat cttgaactct
     1201 tttgatatta gtatgattaa gcagcatgtc atatacaact cttgttttag aattatgctc
     1261 aatctttaga gatttgttta tcccaaagta ttgatgaact tgcatattac gttcacaagc
     1321 ttttttaaat aaatcatcta atgttatgcc tccaaaatct tttaggtttt gaagaattga
     1381 tatacattct ttgtatgcaa catctctagg atcttcagga gcactaacgg ttctttctaa
     1441 ctctaacaaa acaacattgt aaaattctat tgcatctttc gcatcatcta catctactac
     1501 attttttaag tttagttttg aaattgcttt ggctattcta taaatggaat ctcttcttct
     1561 tggtgagtta aagacatctt ttttattctt attcttattt ttagagatta atctaatgaa
     1621 aaattcatct aaaatagatt ttgcttcttc tgagaaaatg ggattgaatc tttttgcata
     1681 tgcaatatgt ttcttcaaat agttagagta atctggaata agtgaatctt cctgtaatga
     1741 tttcatatac gtatatcgtc ttattacatt ctcatcattg ggtattctaa caacaaaaat
     1801 taaatcaaat ctatctatta ttggctttag tgctggaatt tcattaaggt ttatctttag
     1861 atcatcagac caactagagt tattaactgg attagctgat gcaattatag ttgtcggtga
     1921 tattattttg gcattaatac catgtttgtt tattgtaaat tctccttctt ccattacatc
     1981 aagcagatga ccttggtctt caggatcaag tctaccaaat tcattaagag cacaaattgc
     2041 ccattttgct aaaggtaccg ggcctaatct caaaatatag ttttcatctt cttttgaaat
     2101 gatagcagtg agactctttc ctgatgagtt ctgactactt tcatatctac tatttggaac
     2161 caatttgatg attcttttca atgaaagtgt tttaccaaga ccaggatcac caattattag
     2221 aatattaatc ctatatcttc tatta
//
LOCUS       DATIAS010000269         4088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1410942, whole genome shotgun sequence.
ACCESSION   DATIAS010000269 DATIAS010000000
VERSION     DATIAS010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4088
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410942"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1130)
                     /locus_tag="VLA74_05275"
     CDS             complement(<1..1130)
                     /locus_tag="VLA74_05275"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HSF50156.1"
                     /translation="MKNGYVIGLDQIGKDDIKIAGGKGANLGQMIKFGIPVPSGFIVT
                     TSSFDYLVQINHLENQIEQIIKNTDVDNTTKLLKASKTIKKIILSCSMPSEIESKIIE
                     SYKNLSEEKDLEYDKDVNYPNKRDLLCAIRSSATAEDLPTASFAGQQASFLNVNGKEE
                     LIESIKKCWASLFEPRAIFYRSKHGFSKASIAVIVQKMINAQKSGIMFTIDPTTGDNI
                     ILIESTWGLGESIVGGEVEPDSYKVSKAELEKGTRQEAIMEVKISQKTKMRFYDYTLN
                     TNVEVNVPENKANAQVLTKDEILKLAEYGIMIEKYYRDQPQDIEFAIDEKGRITFVQT
                     RAITTKAKEMIEKIDTSHNGKKKLLQGTGASPGIVSGKIKLI"
     gene            1202..1597
                     /locus_tag="VLA74_05280"
     CDS             1202..1597
                     /locus_tag="VLA74_05280"
                     /inference="COORDINATES: protein motif:HMM:NF013877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50157.1"
                     /translation="MSICKVLVFGNKLVKKDNLPLKLIPHLEKEFPEIEFKEFDSVED
                     LQNEGSLIYIIDSVENIENVTIIYNIDQIEISNNFYTIHDMDLGYMLKLMKKVNMIDK
                     VIIFGIPINTLSKIEILNQLKEKIRSTLV"
     gene            complement(1578..2864)
                     /locus_tag="VLA74_05285"
     CDS             complement(1578..2864)
                     /locus_tag="VLA74_05285"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe hydrogenase subunit alpha"
                     /protein_id="HSF50158.1"
                     /translation="MHDSVDINIEQLSKTEGHADLQVKVRNGKVEDVKLKISENKRFY
                     TQAVRRRHYSSIPQFVSRICGTCSIAHLTCSIKAVEKCFNIQPSEQTQILRKLSVYGM
                     MIRDHALHLYFFCLPDVFGKDSIFDFDESQDNLIKQAFAVKSVGNNLSKVVAGRAVHP
                     TFQKIGYFSHIPSREETKEIVNQLKKTREYIFELIEIFYNSDFNFSRKTNFIALVSDD
                     YSFLEGNILTSTGLEVKEEDFWAYLERIVIPYSQATGFKFLANEYMVGALARMNLSKD
                     KLFKESKKDLSSQYLRLFPSNNIYHNNLAQAIEILHCVDHSIQLLEENDFKAQTPPKI
                     NFKGEARRGVGVIEAPRGTLYHHLEINKDSKVTHANFVIPTAQNQIKMEDDIRLLLPR
                     ILNKDKHEIHHELEKVIRAYDPCMSCASHFLKLKWI"
     gene            complement(2857..3336)
                     /locus_tag="VLA74_05290"
     CDS             complement(2857..3336)
                     /locus_tag="VLA74_05290"
                     /inference="COORDINATES: protein motif:HMM:NF013242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50159.1"
                     /translation="MKLNVGWFSFTCCEDSTIVFIELMNERYFEWKKLINFKYFRTFK
                     SNNSLDDLDIAFVEGAISNKKEEETLKKIRDNCKKLVAIGSCACTGSPANQRNFFDQV
                     TKKEIQFILDRFDHRELVSPLSDIVKVDDYISGCPMDEKLFLTKLNQYFKEFEIVNA"
     gene            3513..>4088
                     /locus_tag="VLA74_05295"
     CDS             3513..>4088
                     /locus_tag="VLA74_05295"
                     /inference="COORDINATES: protein motif:HMM:NF012795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HSF50160.1"
                     /translation="MINKNITMMHGGGGALMQNMIQNSILKNLNDKRCEVPLSALDDA
                     AVVEGIVFSTDSYTVNPIFFPGGDIGKLSISGTVNDISVMGGDPFALACSLVIEEGFP
                     LDDLETIMKSIQETCNEANVSIVTGDTKVIEKNSIDKLIINTTGIGKKNKLLEHNLNI
                     IKKYRSDYNSLWLSDSNIRHGDKIIISGTLGD"
BASE COUNT         1346 a          635 c          551 g         1556 t
ORIGIN      
        1 aaaataagtt ttatctttcc acttactata ccaggagatg ctccagtgcc ttgtagaagt
       61 tttttcttgc cattatgtga agtgtcaatc ttctcaatca tttcctttgc ttttgtagta
      121 attgctctag tctggacaaa agttatccta cccttttcat ctatagcaaa ttctatatct
      181 tgtggctgat ctctatagta tttctcaatc attattccat attctgccaa ttttagaatt
      241 tcatcctttg ttaatacctg tgcatttgcc ttgttttctg gcacattgac ttcgacattt
      301 gtattcagag tataatcata gaaacgcatc tttgtttttt gagaaatttt tacttccata
      361 attgcctctt gtcttgttcc tttttctaat tcagctttgc taactttgta ggaatctggt
      421 tcaacttctc cccctactat actttcaccc aatccccatg tagattcaat caaaattatg
      481 ttatctccag tagtgggatc gatagtgaac atgataccag atttctgagc atttatcatt
      541 ttttgaacta ttacagctat gctggctttt gaaaaaccgt gctttgaacg atagaaaata
      601 gcacgaggtt caaataatga agcccagcat tttttgattg attcaattaa ttcctctttt
      661 ccatttacat ttagaaaaga agcttgttgt cctgcaaatg aagcagttgg taaatcttca
      721 gcagtagctg aacttcttat tgcacataac aaatctcttt tatttggata attaacatct
      781 ttgtcatatt caagatcttt ctcttctgat aaattcttgt atgattcaat aatttttgat
      841 tctatttcag aaggcatact acatgaaagg ataatttttt ttattgtctt tgaggctttc
      901 aataattttg ttgtattatc tacatctgta ttttttatga tctgttctat ctggttttca
      961 agatgattta tctgtactag ataatcaaat gatgaggtag ttacaataaa acctgaagga
     1021 acaggaatgc caaatttaat catttgacca agatttgctc cctttcctcc tgctatttta
     1081 atgtcgtctt ttccaatctg gtcaagccct attacatagc catttttcat aatgactata
     1141 tgatctaaaa gcatttaaaa aattttaaat taaaagattt ttatagtata tatataaaac
     1201 tatgtcaata tgtaaggttc ttgtatttgg aaataaatta gttaaaaaag ataatcttcc
     1261 tttaaaatta attcctcatt tagaaaaaga atttcctgaa attgaattca aggaatttga
     1321 ctctgttgaa gaccttcaaa atgagggatc tttaatttat atcatagatt cagtagaaaa
     1381 tattgaaaat gtaactatta tttataatat tgaccaaata gaaatttcta ataatttcta
     1441 tactattcat gacatggatt tagggtatat gttaaagttg atgaaaaaag taaatatgat
     1501 tgataaagtt attatttttg gtattcccat caacactctt tcaaaaatag aaatattaaa
     1561 tcaattaaaa gaaaaaatta gatccacttt agtttaagaa aatggcttgc acagctcata
     1621 cagggatcat atgctctaat tactttttcc aattcatgat gtatttcatg tttatcttta
     1681 tttaatattc taggcaatag taacctaata tcatcttcca tttttatctg attttgtgca
     1741 gtaggaataa caaaattagc atgtgttacc tttgagtctt tatttatttc taaatgatga
     1801 tataatgttc cccttggtgc ttctataact cctacacctc ttcttgcttc gcctttaaaa
     1861 tttattttag gaggtgtttg agctttaaag tcattttctt ctaaaagttg aatagaatga
     1921 tctacgcaat gtaatatttc aattgcctga gctagattat tgtgatatat attatttgaa
     1981 ggaaataatc tcagatattg agatgataaa tctttcttag attccttaaa taacttgtcc
     2041 ttgcttaaat tcattcttgc tagagcgcca accatatatt cattagcaag gaatttgaaa
     2101 cctgtagctt gagaataagg aattacaata cgttccaaat aagcccaaaa atcttcttcc
     2161 tttacttcga gtccagtgga agttaatata ttaccttcta aaaaactata gtcatcacta
     2221 acaagagcta taaagttagt tttcctggaa aaattaaaat cactattata aaatatctca
     2281 attaattcaa atatgtattc tctagttttt tttaattgat tcacaatctc tttagtctct
     2341 tctctcgatg gtatatgtga aaaataaccg atcttttgga atgttggatg tactgccctt
     2401 cctgctacca ctttagaaag attatttcct acacttttta ctgcaaaagc ttgttttatt
     2461 aagttatctt gagattcatc aaaatcaaaa attgaatctt taccaaaaac gtctggtaaa
     2521 cagaaaaaat acagatgtag tgcatgatcc cttatcatca tgccatatac agaaagtttt
     2581 cttaaaattt gtgtttgttc agacggttga atgttaaaac atttttcaac tgcttttata
     2641 ctacaggtta ggtgcgcaat actgcatgtt ccacaaattc tagaaacaaa ttgaggtata
     2701 cttgaataat gtcgccttct aactgcttga gtgtaaaatc ttttattttc gcttattttt
     2761 aatttaacgt cttcaacttt tccattacga actttgactt gtaaatctgc atgcccttcg
     2821 gttttactta attgttctat atttatatct acactatcat gcatttacta tttcaaattc
     2881 cttaaaatat tgatttaatt tagtaagaaa taacttttca tccattggac aaccggaaat
     2941 ataatcatca acttttacta tatcagataa cggtgaaacc aattctctat gatcaaatct
     3001 gtctaaaata aactgtattt cttttttggt aacttgatca aagaaatttc tttgattagc
     3061 tggactacca gtacaagcac agctaccaat agcaacaagt tttttacaat tgtctcttat
     3121 ttttttcaag gtttcttcct ctttcttgtt agaaatggca ccctctacaa atgctatatc
     3181 taaatcatct aaagaattat ttgacttgaa tgttctaaag tatttaaaat tgattaattt
     3241 tttccattca aaatatctct cattcattaa ttctataaaa acaatggtac tatcttcaca
     3301 acatgtaaaa gaaaaccatc ctacatttaa cttcataata ttaaactaaa tttagcttta
     3361 cttactttta tttttagtgc gataaattat atattttatt aacaaatatt aaaaaacaca
     3421 attacaaaag attatacctc cttgcaaatt ttaaatctat ttaaggttat tttcgtgaac
     3481 ttgatataat atgaaattta attattatgg tattgataaa taaaaatatt acaatgatgc
     3541 atggtggtgg tggcgcgtta atgcaaaata tgatacaaaa ttctatctta aaaaatttga
     3601 atgataaaag atgtgaagtt ccactaagtg cattagatga tgctgcagtt gttgaaggaa
     3661 tagttttttc tacagattct tacacagtta atccaatttt ctttccgggt ggagatatag
     3721 gtaaattatc aatttctgga actgtgaatg atatttctgt aatggggggt gatccatttg
     3781 ctttagcatg tagtcttgtt attgaggaag gctttccatt agatgatctt gaaactataa
     3841 tgaaaagtat tcaagaaaca tgtaatgaag caaacgtttc cattgttact ggtgatacaa
     3901 aagttattga aaaaaattca attgataaat tgatcatcaa tacaactgga ataggcaaga
     3961 aaaataagtt actagaacat aatctcaata ttataaaaaa atacaggtca gattataatt
     4021 cgctttggct atctgattcc aatattagac atggagataa aattataatt tcaggaactt
     4081 taggagat
//
LOCUS       DATIAS010000270         4114 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1545826, whole genome shotgun sequence.
ACCESSION   DATIAS010000270 DATIAS010000000
VERSION     DATIAS010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4114
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1545826"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1085..1393)
                     /locus_tag="VLA74_05300"
     CDS             complement(1085..1393)
                     /locus_tag="VLA74_05300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50161.1"
                     /translation="MNEEQKSPTTDDQEEVSLSFLPSPRVEERLQKVGLQEDLMEFVT
                     KVSDLKKWFKGYKVETIELNIEGAVKDGNITKLFVSFEGKGGCKITLKPEQTTTTISP
                     "
     gene            1591..3969
                     /locus_tag="VLA74_05305"
     CDS             1591..3969
                     /locus_tag="VLA74_05305"
                     /inference="COORDINATES: protein motif:HMM:NF045198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSF50162.1"
                     /translation="MQNYQENIQDLTKCTVAIKRSGDGTTRGTGVIVTDDGLILTCYH
                     VVGNIKTKTLDKTVDIDFPSNPNVKGHANVIDSFCELEMDIAFLQLQEKLPELTTVAN
                     LGETIYPKEHVFQSFGYRNPEGTIKFEGLPANGTIQGKTRLKSRNGTTNTISPLLIAL
                     KSDQIAKGMSGAPVLDTEINKVVGIISDRYDSRYLSEDIDIYRTLSFAIPVESIVGVF
                     PEIRQKNPGLVKINEFLQKIQLQGRLYQQIDVSYVYPVQYDEIKEALKINRIVFITGT
                     PEYGKTFTAIRLLWEYYMEKYDPDYIWQWTDEDQVTSFIERLLRTDNSLEHHIIYFED
                     PFGKTRYIHNEIFEKNIGRIIDSLKTFEDTYIIITSREDLLREFESDKITEIDLNNFK
                     KTLNINSYSYKDRQNILCNWATLWNCKWFMHKDLKKITIESIKDFRILPTPLNMKDFA
                     VATINVTDEKTLLNKIDEKSKETSKSFAKEIKDMTEDKILFFFLVFVQLFYVEIIKKK
                     YEELISELNIENSWEFDRILDLFKDDKVDVGKWSHREILDFSNSSYSEALYPLLMEKR
                     YPTTINKKIFSKMLFNLAEDQKTASIASRVIAENFDKLLPDVRNLLFKLADEGFADVD
                     MAEAIAENYNKLPPDVRNLLFKLADGFGVKAIIVNYNKLPLDVRNILFKLAEKESVST
                     PVILNIMFYFDKLPPDVRNELLLKLKLHINYSYNSDVIAHTIEWNFDKLSEDVRNELL
                     LALSANLSNLISEPFGLVSSVAESIDTVITENYNKLPPKVRDELLRRIKDFV"
BASE COUNT         1491 a          612 c          674 g         1337 t
ORIGIN      
        1 cagattaaag aataaccaga aaagatttgg attgataatg ggtataggat ggaacatggg
       61 tgttctaaac agattgcaat gcgcaaaaag actagaaata aagattacat aatatgttat
      121 atcgaattag gcaacaaccc cgcccatatt ataactcttt aatacaagaa tatcctaaca
      181 tggcacataa atactttata cagaaaccaa tttccattga tgatctggta caagaaatat
      241 atagagtttt atcacaataa aaaattgaaa aactataaag atataatatg ttcttgaatc
      301 tagttgcata aatgccgggc tagccagtat aaatatttct tatacctgta aagagaataa
      361 atgaagttat ctttccaagt ataatgatgt taattctaac tgtgaatttc tgttatgtcg
      421 tataatgatc tatacttaat agcttgagaa atagttgtag ataagatggt ccaatcaatc
      481 agtctgtaaa cattttataa ctcttacctt tatactatct tatttgtaac tagaaatatg
      541 tctttcaata cgagtgtaaa cgcgattgct ctttctattt agattgaaat cagacaattt
      601 ttgaggatac ttagcaattg gtcccctacc ctaacctatt tagactttgc tcgacaacat
      661 aatagaaccg gaagttagct atgatcgttc ctacaatgcc acttgatagc taaaatgtaa
      721 atacaactta gcatttcagt tcagtatcat atctttcatg aaaatctgcg tgaagagttc
      781 atctgaataa aaataattac aactaaaact tgtagatcaa taatgtaaaa tatgaattct
      841 aaaaccgtta aataaatata tttttgttat ccttatatca ataactaaag atagtaattt
      901 tgatgaataa caaatttgtt attaaaacct ctggtatcac ataacatatt tgtgaagttt
      961 taagtattaa taagcaaatt atttatcaaa aatattttcg ttgatagatt aaacaattgt
     1021 taatattgag atattgtcct attactgcaa agaatatata aaaaattatt tcaagataat
     1081 ttcattaagg actaattgtt gttgtcgttt gttctggctt taacgtaatt ttacatccac
     1141 ctttgccttc aaaggaaaca aataattttg taatatttcc atctttgaca gcaccttcaa
     1201 tattaagttc tatggtctct actttgtagc ctttgaacca tttctttaaa tcacttactt
     1261 tggttacaaa ctccatcaag tcttcttgaa gaccaacttt ttgcaaacgt tcttcaactc
     1321 ttggagaagg tagaaatgaa agactgactt cttcttgatc atctgtagta ggactttttt
     1381 gctcttcatt cataatacta ctttatatca attcctaata ctataaattt atggtatgtg
     1441 acttgatgta ggttgatgtt gtaatctttg tgacttttac aaaaatgtta ttgcctacag
     1501 aagtttggaa tataaaacta caaataaacc ttaaataaat caaatttgtt agtctattaa
     1561 ttagatcaca tatgtaaggt tagaaccaga atgcaaaatt accaagagaa tattcaagat
     1621 ttaaccaaat gtactgttgc cattaaaaga agcggtgatg gcactacccg tggtactggt
     1681 gttatcgtaa cggatgatgg actaatacta acgtgttatc atgtagttgg aaatattaaa
     1741 actaaaactc ttgataaaac tgtagatatt gattttccat ccaatcctaa tgttaaagga
     1801 catgctaatg ttattgatag cttctgtgag ctagaaatgg atattgcatt tttgcagcta
     1861 caagaaaaac tgcctgagtt aaccactgtt gcaaatcttg gtgaaactat atacccaaaa
     1921 gaacatgtct ttcaaagctt cggatataga aacccagaag gaactattaa atttgaaggt
     1981 ttacccgcaa atggaacaat acaaggaaag actcgcctaa agtctaggaa tggtactact
     2041 aatactatct ctccccttct tattgcactt aaatctgacc agattgcgaa aggaatgagt
     2101 ggagctccag ttttagatac agagataaat aaagttgttg gaattatttc tgatcgttat
     2161 gactcccgtt atttgagtga ggatatagat atctacagga ctctttcttt cgcaattcct
     2221 gttgaatcta tagttggagt atttcctgaa attagacaaa aaaatcctgg actagtaaaa
     2281 atcaatgaat ttttgcagaa gatacaatta caaggtagat tataccaaca aattgatgtt
     2341 tcatacgttt atcccgttca gtatgacgaa ataaaggaag ctcttaagat aaaccgaatt
     2401 gtattcatca ctggtacacc agaatatggt aaaaccttca cagccatacg gttattgtgg
     2461 gagtattaca tggaaaagta tgatcctgat tacatttggc aatggacaga tgaagatcag
     2521 gttacttcat ttatagagag gttactaaga actgataatt ccttagaaca tcatattata
     2581 tactttgaag atccttttgg taaaacaaga tatattcata atgaaatatt tgaaaaaaat
     2641 attggacgta taatagactc cttaaagacc ttcgaagata catatataat aataacttca
     2701 cgcgaggatt tgcttagaga atttgagtca gataaaatta ctgaaatcga tctgaataat
     2761 tttaagaaaa ctcttaatat taattcatat agctataagg ataggcaaaa tatactttgc
     2821 aattgggcaa cattgtggaa ttgcaaatgg ttcatgcata aagatctaaa gaagattact
     2881 atagaatcta taaaagattt tagaatatta cctacgcctt taaatatgaa ggattttgct
     2941 gtagcgacca ttaatgtaac agatgaaaag acattattaa ataagataga tgaaaaatca
     3001 aaagagacat caaagagctt tgcaaaggaa atcaaagata tgacagaaga taaaatactc
     3061 ttttttttcc tcgtttttgt tcaattattt tatgttgaaa tcataaagaa aaaatatgaa
     3121 gagttaatca gtgaattaaa tatagaaaat tcgtgggagt ttgacagaat ccttgatttg
     3181 tttaaagatg ataaggtaga tgttggtaaa tggtcacata gagagatatt ggacttttct
     3241 aattcctcct attcggaggc cttatatccc cttttaatgg agaaacgata tcctactaca
     3301 ataaataaaa aaattttcag taaaatgcta ttcaatcttg ctgaggatca aaagacagca
     3361 tcaatagcaa gcagagtgat agcagaaaac tttgataagc tgctacctga tgtaaggaat
     3421 ttactcttca aacttgcaga tgaaggattt gctgatgtag acatggcaga ggcaatagca
     3481 gagaattata ataagctgcc acctgatgta aggaacttac tcttcaaact tgcagatgga
     3541 tttggtgtaa aggcaataat tgttaattat aataagctgc cacttgatgt aaggaatata
     3601 ctcttcaaac ttgcagagaa ggaaagtgtg tctactcccg taatactaaa cattatgttt
     3661 tatttcgata aactgccacc tgatgtaagg aatgaattac tgctaaagct aaaattgcat
     3721 attaattatt cttataattc tgatgtgatt gcccatacaa ttgaatggaa ctttgataaa
     3781 ttatctgaag atgtgagaaa tgaattgctg ctcgcattat ctgcaaacct cagtaaccta
     3841 atttcggaac cattcggatt agtatcgagt gtggctgagt ctatagatac agtcataaca
     3901 gagaattata ataagctgcc acctaaggtg agagatgagt tgttaaggag aattaaggat
     3961 tttgtttagt cttattaaga aagaggactt gaagagacaa ttgaggaaac atacaatcac
     4021 gttagagtct atccgaaaac acctcctctc ttatatgtta tccaagcaca gacaaaatgt
     4081 aatattgcaa tatagttatc ttccttcttt tccc
//
LOCUS       DATIAS010000271         3202 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_593090, whole genome shotgun sequence.
ACCESSION   DATIAS010000271 DATIAS010000000
VERSION     DATIAS010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3202
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_593090"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(482..1027)
                     /locus_tag="VLA74_05310"
     CDS             complement(482..1027)
                     /locus_tag="VLA74_05310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50163.1"
                     /translation="MDRSSKTGRWHLAGIEGEFISYSFITEKYDFDGAYLSVWILPST
                     FNVPFDQSSGQYCEVIDKKVININNFDALQITTRCFIIDTDTYIDDYYIQASDKVILI
                     EYQGLDDYVFNLHYSDFINSLGSLRISNTLPLSNDQLLSGGSQYGYSNNELSNSLPNN
                     DEPVCYQPDIYPDVIEPEICY"
     gene            complement(991..1122)
                     /locus_tag="VLA74_05315"
     CDS             complement(991..1122)
                     /locus_tag="VLA74_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50164.1"
                     /translation="MLVIIENSYSQTGSKETLKRWGVDINLPNNYQWIEVVKPEDGI"
     gene            1289..1462
                     /locus_tag="VLA74_05320"
     CDS             1289..1462
                     /locus_tag="VLA74_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50165.1"
                     /translation="MTYKLISTKTMIIVNPKGGSGFIQIEPYPYDIDREDGRVLRISK
                     SRQKNYSMFSKFI"
     gene            complement(2596..2925)
                     /locus_tag="VLA74_05325"
     CDS             complement(2596..2925)
                     /locus_tag="VLA74_05325"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSF50166.1"
                     /translation="MENIEPNQFDSLLSSGERALVMFYADWCPFCQRFKPIFESAITA
                     KSASNGYKFYESKVNDDDNPLWDRFSISAVPTLIAFDKGKIISRRDAKMGVGLNESDL
                     DSMLKEV"
BASE COUNT         1183 a          447 c          414 g         1158 t
ORIGIN      
        1 aattgaaaaa cattgataat tgatacaatt taattctaaa atattataat tttttcgagg
       61 tatcacccat tttactcatt taaggtaaaa caataagtga aataagatat attttattct
      121 ttttttttct tattttatac atattattga aattttttgg cgccgaaaag tttctaacaa
      181 tctctaatat tctaaattaa taaaaataat aatcagaaat taataaaaat aataatcagt
      241 tttatgaatc acctctaatt caatcaattg tactaaagta tacaaattta catttgttta
      301 tgattttttg ttatttatga agagaataga tgttacaaac attaacagat atctttatag
      361 tagggggata aaataagtga ttagttgata atcacatttt ctcatcattt ctatttctgt
      421 taatcttgtt attaactatt aaccattatt atttttgtat ataagttcta aattacatat
      481 attaataaca tatctctggt tctattacat ctggatatat atctggttga taacaaaccg
      541 gttcatcatt attaggaaga ctattagaaa gttcattatt gctatatcca tattgggatc
      601 caccagataa caactgatca ttgcttaaag gtaatgtgtt tgaaatacgt aaactaccga
      661 gagaattaat aaaatctgaa taatgtaagt tgaaaacata atcatctaaa ccttgatatt
      721 ctatcaatat aactttatct gaagcttgaa tatagtaatc atctatataa gtgtctgtat
      781 caataataaa gcatctagtt gtaatttgta acgcatcaaa attattgata tttattactt
      841 ttttatctat tacctcacaa tattggccag aactttgatc aaaaggaaca ttgaatgttg
      901 atggtaatat ccatactgat aaatatgctc catcaaaatc atatttttca gtaataaatg
      961 aatatgatat gaattcacct tctattccag ctagatgcca tcttccggtt ttactacttc
     1021 tatccattga taattatttg gaagattaat atcaactccc catcttttca aagtttcttt
     1081 tgatcctgtt tgagaatatg aattttcaat aataactaac ataatcgaaa atattactag
     1141 aataaaaaag attttcataa attaatttca aaatcaacat atttaaatta tttctttaaa
     1201 caagtggata tctctttagt cccatcagaa aaaatatcca ttacattagc aacatttaga
     1261 aacattgcga aggatataat tccaaataat gacatataag ttaatttcaa ctaagacaat
     1321 gattattgta aatcctaaag gtggttctgg atttatacaa atagaaccct atccctatga
     1381 tattgataga gaagatggaa gagtattgag aatatcaaaa agtagacaaa aaaattattc
     1441 aatgttttct aaatttatat gaaataattg tggaaagatc cacaacaatc aactaatcaa
     1501 attttttcat acttgaacat tagataagga gtcaattctt tatcgtgtcc ttcatttgat
     1561 aagttttctt atataaaaga atagttaatt gtgatattat ataacaatgg gtctaaataa
     1621 agacacaggt ttgtaatggt gtatataata agagatatcc tttgttatat gttacctcta
     1681 aatttgttaa gagaatcttt tttatcggtt atttattgaa tatttactgg tcccacttta
     1741 tcgaagggtt caaatcccac tgacccctaa taactaaaaa acctaacatc atacttatca
     1801 tttataaaaa aattatttta tatatattag cggaactctt taatccattc ctctttgata
     1861 atatgatcag taaattcttt tagtttaaaa tttgtaatta caatatatac aattctatta
     1921 tgtgaatcag gatagtcact aattgtattc tgtttattct tattgttatt atctttaatt
     1981 ataatttatt aatattaaag aaatattaga aaaatatatt tatctataca aaagaatcaa
     2041 taataaaaaa atatattata tattatatgc agcgctgcat tgctgcatgt gctgctatcg
     2101 ttctgatttt tggtcctgat tccataggtc ttttagatag ctgttttagt tgagtgcttc
     2161 atttatttat aaaacaaatt ttctacagta gattaatagt agaagataag agtttcatca
     2221 aatggatcat taattaaaag atcatttcat aaacacaaga aaaaattatg aatcaataac
     2281 aaaagtaaag gttattttct agttcatatt attattgctt catgaactct attgaaaata
     2341 ggattggaac ccagagttca atggggccag tgggatgtga aacaaatttg acataaattt
     2401 tggtcctact aagaaaatat agatccagca cttttcatta atattttgga tttgaattct
     2461 cgtataaaat gggaccagct aaaaaataac aaaaagaaaa ataggaaatt tatgaagaca
     2521 atgtattctt attaggtgta acttactaca gtgtaaatat atggtcacat gatgaaacgg
     2581 cggagcatag gcatcttaaa cctcttttaa catggaatca agatctgatt cgttaagacc
     2641 aacacccatt ttagcatccc ttcttgaaat aatctttcct ttatcaaaag caattaatgt
     2701 aggaacagca ctaattgaga atctatccca tagtgggtta tcatcatcat taaccttaga
     2761 ttcatagaat ttgtaaccat tgcttgcaga ctttgcagta atagcagact caaaaattgg
     2821 tttgaacctt tgacaaaaag gacaccaatc tgcataaaac atgactaaag ccctctctcc
     2881 tgaagataat aagctatcaa actgatttgg ttcaatattt tccatgttat tactatgtgt
     2941 actacattag tattaaatga acatagaaaa tggcagtagt tattaaaaca attcacgagc
     3001 attattatta gatgtttgct caccatatta tacagtgagg actggcagta agaaagaggt
     3061 ttcatcatca tcttcttctt ttacattacc aataaaacag gcattcctga ttgctcacat
     3121 aaatggattg ctttggctgc gtagatatcc agcttccaat ggatattaga aacactagta
     3181 cctagtatca ttgcaggatt at
//
LOCUS       DATIAS010000272         2021 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1001886, whole genome shotgun sequence.
ACCESSION   DATIAS010000272 DATIAS010000000
VERSION     DATIAS010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001886"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /locus_tag="VLA74_05330"
     CDS             complement(<1..819)
                     /locus_tag="VLA74_05330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50167.1"
                     /translation="MEELFPQTLFDSPCVSVDKNRDLWVAIEMCAQYLESAVDTLIVV
                     NQNNPIGTIGGREILSHLRKNTIPDSYFRTKIGDIFFNHFPQVEVKIKLDDLMNKWKN
                     TGRAFSIISNQNAEYFSVSSRKMLEIGKRYKSGIFISSFPKKKIVTFKEDELLGDILN
                     TMFKNHIRRLMLEDSNQFISDRIILGEISMILKYQDISNLLDIPINKFKFEYIKEITT
                     DLTLNQICLIMDKMDHPCVLYQDSIVTPWDICLILLSENLTEFSGKTYLQKKICP"
     gene            1436..>2021
                     /locus_tag="VLA74_05335"
     CDS             1436..>2021
                     /locus_tag="VLA74_05335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50168.1"
                     /translation="MKKQLIIGIIVITFTSIILVIGSPFQITSNNLIQNNGHQQKVYA
                     TSEDDDSGGGDDVEENDGIDDDSSNNDGSGGADNDNEGREDGKISDGESDKSDDDLSS
                     QDPLEELTAENPPEITGEVVTGKLTPNFGITDNLQIAPPLSIDDQTIKVPQAAEEFNP
                     NVKLGDLLKEQSQTDIIQEIPFQTTEPPISKPSDP"
BASE COUNT          771 a          286 c          296 g          668 t
ORIGIN      
        1 tggacatatt tttttttgta aatatgtttt accactaaat tctgtcaaat tctctgaaag
       61 caagatgaga catatatccc aaggagttac tattgaatct tgatataata cacaaggatg
      121 atccatttta tccattatca aacaaatttg attaagagtg aggtcagttg taatttcttt
      181 tatatactca aatttaaatt tattaatagg aatatctaaa agattagata tatcttgata
      241 tttcaagatc atagaaattt caccgagaat tattctatca ctaataaatt ggttagaatc
      301 ttctagcatt aatcgtctaa tgtgattttt aaacattgta ttgagaatat cgcctaataa
      361 ttcatcttcc ttaaaagtaa ctattttctt ttttggaaag gatgaaataa aaataccgga
      421 tttatatcgc ttaccaattt caagcatttt tcttgaagag acagaaaaat actctgcatt
      481 ttgattagaa ataatagaaa acgctcttcc agtgtttttc catttgttca ttaaatcatc
      541 aagtttgatc tttacttcta cttgaggaaa atggttaaaa aaaatatctc ctatcttagt
      601 tctaaaataa gaatcaggta tggtattttt tcttaaatga gatagtatct cacgtccacc
      661 aatagtccca ataggattat tttggtttac aacaataagt gtatctacag ctgattctaa
      721 atattgagcg cacatttcta tagcaaccca aagatccctg tttttatcca ctgatacaca
      781 gggtgagtca aataatgttt gaggaaataa ttcttccaaa gttaattcag aaagtttcct
      841 gtcgagaatt atctttacac cttctttttt aaggctatct tattcatata aatgatattg
      901 tctttacatt gattgttttt aacgtaaaag gtgagaaaaa aagacttagt agaagatatg
      961 actgataaag cagatataaa agaagactcc atttctgaag aatgagatac cctacatata
     1021 gataaataaa agaaaaaaat atagaataaa taacaaattt ttaaaaaaat cttattgttt
     1081 tacagaatta atgttttaat aacaattctt taaatttaag aaaatacttt aaatcaaaaa
     1141 ttattgtata aaattagata aagtgtttaa aaaatgataa atagaattgt tgtgaattgt
     1201 tcttgactat cggatcatat aattgtcacc agactacccc agtcataacc tgagtctatt
     1261 atagtatttt tataatccga tcaccaaatg atgcttatta gttcaggtta tgacaataat
     1321 actttttact tttattcgaa tgttaaaaat ataagagaat aaaaacaggc agatatattt
     1381 ctatctattt ttggatatgc tcttatactt cgttgctaat ataatattta cttttatgaa
     1441 gaaacaattg ataattggta taattgtaat aacatttacc agtataatat tagttatagg
     1501 ttctcctttt caaataacca gcaacaattt aatccaaaat aatggacatc aacaaaaagt
     1561 ctatgccaca tcagaagatg atgatagcgg aggtggtgat gatgtcgaag aaaatgacgg
     1621 aatcgatgat gatagtagta ataacgatgg cagtggagga gccgataatg acaatgaagg
     1681 gagagaggat ggaaaaataa gtgatggtga aagcgataaa tctgatgatg atttatcatc
     1741 acaagatcca ctagaagaac taacggcaga aaatccacca gagataacag gagaagtagt
     1801 aactggaaaa ttgactccta attttggtat tacagataat ttgcaaatcg ctccaccact
     1861 atcaattgat gatcaaacaa taaaagtacc acaagcagca gaagaattta atcctaatgt
     1921 aaaattaggc gatctgctaa aagaacaatc tcagacagat attatacaag aaattccatt
     1981 ccagacaaca gaacctccaa tttcaaaacc atctgatcct a
//
LOCUS       DATIAS010000273         3174 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1411288, whole genome shotgun sequence.
ACCESSION   DATIAS010000273 DATIAS010000000
VERSION     DATIAS010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3174
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411288"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="VLA74_05340"
     CDS             <1..369
                     /locus_tag="VLA74_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50169.1"
                     /translation="NIEEHKKSRDRNKYYYDYDLELDFSIDTNDPKSIKSKIYDDRLY
                     YYKAHQFLKLGLFLKKDAPVFKVNIDHLPSEIIYDLSQLDQRARNYVLKQAVSRIFEN
                     INFDLYHHSVSANLEVILVK"
     gene            366..1808
                     /locus_tag="VLA74_05345"
     CDS             366..1808
                     /locus_tag="VLA74_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50170.1"
                     /translation="MTANFNNNNDYNERDDLDRLKEQILSDQEKDIEKQKQSDNINYD
                     NIVIDDGRDLKSKILNYGFADFVIRTTKKTVKREDSLIRQLFYTGLSAYSNRPVNIGI
                     KAPTSEGKTYVVKEVIMKFFPRKDVWIIGSMSPKVIIRQKGKLVDGDTNELLEPKIRE
                     LKKQISETKNVETKENLQEQLEQFLDNSKIVIDLSNKIFVFLEPPHPQTWEILKAILS
                     HDAWEIEHPFVDKTEYLGTQVKRVVTWGWPVCVFCSARDESKWEIWPEIQSRCLITSP
                     NMCLEKYEESNLLTAQTMSLPYDIQQKIIVSDEEIELAKKCVLYLKYQILKLSRREEY
                     QEPKNNNLEVDSRKKSNPVWIPYGQILGEVLPAEKGPDMRTQQRLFYLLNVIPLAKIE
                     SRQKLFDGNQEMVIANLEDLAEVLHITQNISGIPSYKIKFYMEIFLPLIRSKNKKDEK
                     DGKEEKIIAVTTKELADYYKDKKEKGYIYR"
     gene            1834..2331
                     /locus_tag="VLA74_05350"
     CDS             1834..2331
                     /locus_tag="VLA74_05350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50171.1"
                     /translation="MLNNYYIGELKSELDNRQFIYYPLIEFEDSEAIKINLTRKSQEN
                     PDISKISNADQFDNYLHVSPIKLPKNCKNIPKDWLVYQILAIARYRIDLDNFAGPLAD
                     YLNNHEKFQLLDSNGKRLKVKDFVIDYEKDVQLIRYFFKPEFSNYHNKEFGEMKLLHK
                     NINDS"
     gene            2966..>3174
                     /locus_tag="VLA74_05355"
     CDS             2966..>3174
                     /locus_tag="VLA74_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50172.1"
                     /translation="MSNKKVKQKPTQINISSYQEVFTIITLLSKKYVFPNMPKKYIFK
                     HLYKKIEIGNIYKKEDEFPERLYFVP"
BASE COUNT         1320 a          420 c          488 g          946 t
ORIGIN      
        1 aacatagagg aacataaaaa aagtagagac cgaaataaat attattatga ttacgatcta
       61 gaattagatt tttctattga tacaaatgat ccaaaaagta ttaaaagtaa aatttatgat
      121 gatagactat attattacaa agcacatcaa tttcttaaat taggcctatt cttaaaaaag
      181 gatgcacctg ttttcaaagt aaatattgac catttaccat cagaaataat ttatgattta
      241 agccaattag atcaaagagc tagaaattat gtcttaaaac aagctgtttc ccgtattttc
      301 gaaaatatca attttgatct ctatcatcat tctgtttctg ctaacctaga ggtgattctt
      361 gtaaagtgac tgctaatttt aataataata atgactataa tgaaagagat gatttggaca
      421 gattaaaaga acaaatctta tccgatcaag agaaagatat agaaaaacaa aaacagtctg
      481 ataatattaa ttacgataat atagtaatag atgatggacg ggatttaaaa tccaaaatat
      541 tgaattatgg atttgctgac tttgtaatca ggactacaaa aaagactgta aaaagagaag
      601 actctcttat aagacaatta ttttacacag gtttaagtgc atattctaat agaccagtca
      661 acataggaat aaaagcacct acaagtgaag gcaagacata tgtagtaaaa gaagtaataa
      721 tgaaattttt tccaagaaaa gatgtatgga taattggatc tatgtcacct aaagttataa
      781 tcagacaaaa agggaaactt gtagatggtg ataccaatga attattagaa ccaaaaataa
      841 gagaattaaa aaaacaaatt tctgaaacaa aaaatgtaga aacaaaagaa aacctacaag
      901 aacaattaga acagtttcta gataattcta agattgttat tgatctttct aacaagattt
      961 ttgtgtttct tgagcctccc catcctcaaa cttgggaaat cttaaaggct atactttccc
     1021 atgatgcttg ggaaattgag catccatttg ttgataagac agaatattta ggaacacaag
     1081 taaagagggt agtgacttgg ggttggccag tctgtgtctt ctgttcagca agggatgaat
     1141 caaagtggga gatatggcca gaaattcaga gcaggtgctt gattacatcc cctaacatgt
     1201 gtcttgaaaa atatgaagag tccaaccttt tgactgctca aacaatgagt cttccatatg
     1261 atattcaaca gaagattatt gtatcagacg aggagattga attggcaaag aaatgtgtat
     1321 tatatcttaa atatcaaatc ctcaaattat caagaaggga agaatatcaa gaaccaaaaa
     1381 ataataattt agaggtcgac tctagaaaaa aatctaatcc agtctggatt ccttatggcc
     1441 agatactagg cgaggtgtta ccagcagaaa aagggccaga tatgcgcacc caacaaagat
     1501 tgttttatct actgaatgtt attccattag caaagataga atccagacaa aaattattcg
     1561 atggtaacca agaaatggta attgcaaatt tagaagattt ggcagaagtt ttacacataa
     1621 ctcaaaatat tagtggaatt ccctcctaca aaatcaaatt ttatatggag atatttcttc
     1681 cactaatacg gtctaaaaat aaaaaagatg aaaaggatgg caaagaagag aagataattg
     1741 cagtaactac aaaagagcta gcggattatt ataaggacaa aaaagagaag ggctatatct
     1801 acagataatc taagaaaaac aattctcgta gaattgttaa acaattatta tatcggagaa
     1861 ttaaaatcag aacttgacaa tcgacaattc atatattatc cattaataga gtttgaggat
     1921 tccgaagcga taaagatcaa ccttacaagg aagagccaag aaaatccgga tatatcgaaa
     1981 atatcgaatg cggatcaatt cgataattat ttacatgttt ctcctataaa acttccaaaa
     2041 aattgcaaaa atattccaaa agattggtta gtttatcaaa tattggcaat tgcaagatat
     2101 cgaattgatc tggacaattt tgctggtcct ctagcagatt atttgaataa ccatgaaaaa
     2161 tttcagttat tggatagcaa tggaaaaagg ttgaaagtta aggattttgt tatagattac
     2221 gaaaaagacg ttcagttgat tcgatatttt ttcaagccgg aattttcaaa ttatcacaat
     2281 aaagaatttg gagaaatgaa actattacat aaaaatataa atgatagtta aaaaaattaa
     2341 cgaatcactc taaattcgat aatttcgata tctagacaat taattaattt gcaaatatga
     2401 actttcaatt ggtggctata attatgattc taaaattttt aaaaataata ttcgatctaa
     2461 taatactcat cgttggtttt ggaagaatta taatctaaag atgataaatg gtttatgatg
     2521 aaacatctat gtcactataa cagaagagtg aagttagaat agaaattggc tatatataaa
     2581 ttaaccatag aaaaatcata acataaactt ttggagagaa ttgatatatt agatagctca
     2641 aaacttcata tagctaaaat aagaacaatg aaagatttct tatcaaaaga acagtcattc
     2701 ttgaaaagat tgtatctctt caatattatg atgctgccta ctataaaacc agaaatgatt
     2761 attaccaaaa taatagacaa tcataaaaca actataatca aaatatatca taaaatgtga
     2821 tttgtaaatc tattagaaac aattcaaaaa attatcaagt agatatatct ttttgtacaa
     2881 ggtcaattag acgacttaat ggctatataa taaatataat tcataaacgt aaagtatata
     2941 tgttaccaaa ttatatatac atataatgtc aaacaaaaaa gtaaaacaaa agccaactca
     3001 aattaacata tctagttacc aagaagtatt tacaataata acattattat caaaaaaata
     3061 tgtcttccct aatatgccca aaaagtatat ttttaagcac ttatataaga aaattgaaat
     3121 agggaatata tataagaaag aagatgaatt tccagaacgt ctttattttg ttcc
//
LOCUS       DATIAS010000274         2826 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1546146, whole genome shotgun sequence.
ACCESSION   DATIAS010000274 DATIAS010000000
VERSION     DATIAS010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1546146"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VLA74_05360"
     CDS             complement(<1..377)
                     /locus_tag="VLA74_05360"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HSF50173.1"
                     /translation="MLGKKDKKYSYVKDIVIIIIGVAIFWFAVKIFLNVDNPFYVVSS
                     GSMIPVLNVGDILVVRDGNSFENLKVGDIIVFNRPDGADRVIVHRIIDITDKFGEKII
                     VTKGDANDGIIPGTDFPIREKDY"
     gene            complement(491..928)
                     /locus_tag="VLA74_05365"
     CDS             complement(491..928)
                     /locus_tag="VLA74_05365"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF024848.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HSF50174.1"
                     /translation="MKILLSINIDGASRGNPGPSGIGISIIKRDKLILRYGEFIGIQT
                     NIQSEYFSLKRALEIAIGLDNDIMIFSDCLSVVKQRKIKNRVRKKGLRTLTRQISNLE
                     KNFNRISYKFIPRRKNINVDRVANQAIDDYFNTNNNSLYSRQQ"
     gene            complement(1004..1753)
                     /locus_tag="VLA74_05370"
     CDS             complement(1004..1753)
                     /locus_tag="VLA74_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF50175.1"
                     /translation="MRIVQISDIHVGSYFRQDVFDTLVDEINSVIKPDCIIITGDLTD
                     EGLLFQFENAKNQISRLDCPNKIIIAGNHDYRHTGYLIFKKFFPSRNQIYEFDDAAII
                     TLGTARPDRDEGEVGYRQNSWMEKTLAKINKVKIIAMHHHLISIPDTGTDKVIVYDAG
                     DSLRSCLQSSVNLVLCGHKHRPWLWNLGNLKIAYAGTASSTRFRGFFENSYNIVEICD
                     NKKFNLDIKIVGGKRFPLIDLVEKYKPYLDS"
     gene            1902..2465
                     /locus_tag="VLA74_05375"
     CDS             1902..2465
                     /locus_tag="VLA74_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50176.1"
                     /translation="MPKRRFKPTKPSKKIGKKQLLLPPILIGIATFGGIIIMQLSPPP
                     PVLDICLKAHNVDTFNVYPIIQIFVDDKQKLLPDSVGKEIKDGNECIHLIHTDEVGQN
                     VHLQYIRPIRMTMDDFLKIYTSDNNTIHVVDNSTGTFINEIVDLDRYDIQYSYYSENN
                     EFTTVTNSTLMPPFTKYMVVKMELISK"
     gene            2503..>2826
                     /locus_tag="VLA74_05380"
     CDS             2503..>2826
                     /locus_tag="VLA74_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSF50177.1"
                     /translation="MTQKKAIVIRGDGTGPELVSAMMKVLKECNTGVELIPVEAGSEY
                     WEKNRTNSYISDEVWKMLSESDACFKGPTTTIPDPSAPRSVAVSIRQKFELYANIRPI
                     KTYKTS"
BASE COUNT          949 a          498 c          395 g          984 t
ORIGIN      
        1 atataatctt tttctctaat aggaaagtct gttccgggaa taattccgtc attcgcgtcg
       61 ccttttgtaa ctataatttt ttccccgaat ttatctgtga tatcaattat tctatgaact
      121 attaccctgt ctgcaccatc aggtctatta aatacaataa tatcaccgac tttcaaattt
      181 tcgaaagaat ttccatctct gactactaaa atatcgccta cgttcaaaac aggtatcatg
      241 ctcccactag acactacgta aaagggatta tctacattta agaaaatctt tactgcaaac
      301 cagaatattg ctactcctat tattataata acgatatcct taacataact atacttctta
      361 tctttctttc ctaacaagtt taaataaaat cgaataactc gttacataaa cttttagatt
      421 aaatcttata tactggcagc tcagtcaaat gcctttatta cattattttt tcaagattaa
      481 ctctgattct tcactgctgc ctgctatata aggagttatt gttcgtatta aaataatcgt
      541 ctattgcttg atttgcaacc ctatcaacat taatattttt tcttctgggt ataaacttat
      601 atgatatacg gttaaaattt ttttcaagat tacttatttg ccttgtaagc gttcttaacc
      661 ctttttttct tactctgttt tttatttttc gttgtttaac tactgacaaa cagtcagaaa
      721 agatcattat atcattatcg agtccaatcg ctatttctag ggcccttttt aaggaaaaat
      781 attctgactg aatatttgtc tgaataccta taaactcacc atatcttaag attagtttat
      841 ctcttttaat gatcgagatt ccaatcccag atggaccagg atttcctctg gatgccccat
      901 cgatatttat cgatagcaaa attttcattg aaaatatgtg attagatttt atatttttaa
      961 ctgaaatgat aaagtattag gaattttcta atcaactaaa aaatcaacta tctagataag
     1021 gcttgtattt ctcgaccaaa tcaattagtg ggaaacgttt tcctccaact atcttgatat
     1081 ccaagttaaa ttttttatta tcgcatattt ctacgatgtt ataggaattt tcaaagaaac
     1141 ctctaaatct ggtagaactt gctgttcctg cataggcgat ttttaaattt cccaagttcc
     1201 atagccatgg tctatgctta tggccacaga gaaccaaatt aacagacgat tgaagacaag
     1261 atctaaggga atccccagca tcatacacaa tcactttatc cgttccagta tctgggatac
     1321 tgattaaatg atgatgcatt gcaatgatct tcaccttgtt gatttttgca agggtcttct
     1381 ccatccagga attttgtctg tatcctactt ctccttcgtc cctatcaggt cttgcagtcc
     1441 caagtgttat aatagcagcg tcatcgaact cgtaaatttg attcctggat ggaaaaaatt
     1501 ttttaaatat taaatatccg gtatgtctat agtcatgatt tcctgcaatt attattttat
     1561 tggggcaatc taatctgctg atttgatttt tagcattttc gaattgaaat aataatcctt
     1621 catcagtaag atctccagtt attattatgc aatcaggttt tattacagaa tttatttcat
     1681 ctactaatgt gtcaaataca tcttgtctga aataactccc cacatgaata tctgaaattt
     1741 gaactattct catatcattt tttctttttc aagattatta aataatacca aaaatatctg
     1801 taaaataaat tatcaatttt atgaataaaa ttgcaatcca tagtagaaaa aataatttag
     1861 aaagactcta atattcaaat ttcaagacaa taaattacat aatgccaaaa agacggttta
     1921 agccgacaaa accatcaaaa aagattggaa aaaaacaact tttgcttccc ccaatattaa
     1981 taggtatagc tacttttggg ggaattatta taatgcaact ttctccaccg ccacctgtgt
     2041 tagatatctg cttaaaagct cataatgtag atacatttaa tgtctatcca ataattcaaa
     2101 tttttgttga tgataagcag aaattattac cagattctgt tgggaaagaa atcaaagacg
     2161 gaaatgaatg tattcacttg attcacacag atgaggttgg tcaaaatgtt catctacaat
     2221 atattagacc gattaggatg acaatggatg atttccttaa aatttataca tctgataata
     2281 acactattca tgttgttgat aatagtaccg gtacttttat caacgaaatt gttgatcttg
     2341 atagatatga tatccaatat tcttattact ctgaaaataa tgaatttact acagttacca
     2401 attctacatt aatgccacct tttacaaaat acatggtagt aaaaatggaa ttgatatcca
     2461 aataaaatat aaatagatta gctttagtga atttttgata ctttgacaca aaaaaaagct
     2521 atagtcatta ggggagatgg taccggacca gagttggtct ccgctatgat gaaggtctta
     2581 aaggaatgta atacaggtgt tgaattaatt cccgtagaag caggttcaga gtattgggaa
     2641 aaaaacagaa caaattccta tatatcggat gaagtttgga aaatgctctc agaaagcgat
     2701 gcgtgcttca aaggtccgac caccacaatt cctgacccat cggctcctcg aagcgttgct
     2761 gtcagtatcc gacaaaaatt tgaattatat gcaaatatta gaccaataaa aacatacaaa
     2821 acatca
//
LOCUS       DATIAS010000275         2469 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_866612, whole genome shotgun sequence.
ACCESSION   DATIAS010000275 DATIAS010000000
VERSION     DATIAS010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_866612"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..492
                     /gene="rpl7ae"
                     /locus_tag="VLA74_05385"
     CDS             103..492
                     /gene="rpl7ae"
                     /locus_tag="VLA74_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7Ae"
                     /protein_id="HSF50178.1"
                     /translation="MSKPYYVKFQVPQDLVSAIYEAVRIAKDSDKIKRGTNETTKAVE
                     RGVSKLAIIAEDVEPPEVVAHLPIICEERDAAYVFVPSKQQLGEAMGITVGSAAATII
                     DAGDSQHILDEIINSTKNKNTKSPPNP"
     gene            520..735
                     /locus_tag="VLA74_05390"
     CDS             520..735
                     /locus_tag="VLA74_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S28e"
                     /protein_id="HSF50179.1"
                     /translation="MSKTIEEKVVPAEVIQIVGRTGIAGEVIQVRVKVLEGKDKGRIL
                     TRNVKGSVRMNDILMLRETEREARKIK"
     gene            786..1001
                     /locus_tag="VLA74_05395"
     CDS             786..1001
                     /locus_tag="VLA74_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24e"
                     /protein_id="HSF50180.1"
                     /translation="MSKTATSLRNCIFCGQHISSAHGTMLVKNDGTIQWTCSNKCKKN
                     YRQLKRDPRKMKWTNKYVKGGIKISKS"
     gene            1038..1439
                     /gene="ndk"
                     /locus_tag="VLA74_05400"
     CDS             1038..1439
                     /gene="ndk"
                     /locus_tag="VLA74_05400"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020266999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HSF50181.1"
                     /translation="MSEQTLIVIKPDAFERKLTGQILSRFENKGLLIRELKSYIFSKE
                     KAEEFYSVHRKKPFFSELVSFISSSKVVACILEGENAINTVRILIGSTRSFDAQPGTI
                     RGDYGLGITNNIIHASDSYESFIKESKVIFK"
     gene            1447..>2469
                     /locus_tag="VLA74_05405"
     CDS             1447..>2469
                     /locus_tag="VLA74_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSF50182.1"
                     /translation="MTLRQPVVVVLGHVDSGKTSLLDKIRGTGVQAREAGGITQHIGA
                     SFFPIETIKKITGRLYERLTKTDEQIPGLLFIDTPGHEVFANLRSRGGSAADIAIVVA
                     DINKGFEPQTIESIEILKKRKVPFVVALNKVDMLSGWKEKKKGDIKTDKQLQIKTDIS
                     ANLPFITEEIKNQDSHILTLLDEKIYTVVGSLSRMGFNSEAFWRIKEFDKELAIVPIS
                     AVSGVGIPELMTVLVGLAQQYMKKRLERHDDYIRGIVLEIKEEQGLGPSANMILIDGT
                     IKQGDMIMAAKRDEIIVTKVKALLLPKPLDEMRDPRDKFRAVNEVISAAGLKIVSPDL
                     EGILAGS"
BASE COUNT          961 a          319 c          482 g          707 t
ORIGIN      
        1 attgaattta attgaaattt taaaaattct tccatggagg taacatttta atagtcttta
       61 ttttgtaaag agatagatga tcccaaaggg tgatattgaa taatgagtaa accatattat
      121 gttaaatttc aagtacctca agatttagta agtgcaattt atgaagcagt gagaatagca
      181 aaagatagcg acaaaataaa aagaggaaca aatgaaacaa ccaaagcagt cgaacgcggt
      241 gttagtaaat tagcaattat tgcagaagat gtagaacctc cagaagtagt tgctcatctt
      301 ccaattatat gtgaagaaag agatgctgcc tatgtctttg ttcccagtaa acaacaatta
      361 ggagaagcga tgggaataac tgttggttct gcagctgcta ctattattga tgctggagat
      421 tcacagcata ttttagatga aataattaat tcaacaaaaa ataaaaatac aaaatctcct
      481 ccaaatccat aattaaaata aaattaggtg ttataattta tgagtaaaac aatagaagaa
      541 aaagtagtac cggctgaagt aattcagatc gtgggtagaa ctggtattgc aggagaagta
      601 attcaagtaa gagttaaagt cttagaagga aaagataagg ggagaattct aactagaaat
      661 gtcaagggtt ctgttagaat gaatgacatc ttaatgcttc gtgaaacaga aagagaagca
      721 agaaagataa agtaatcaca aatatatata tataaacaga gaaaataatg taggtttaat
      781 ttaaaatgag taaaacagct acttctttac gcaattgcat tttttgtgga caacatattt
      841 cttctgctca cggaaccatg cttgtcaaga atgatggaac cattcaatgg acttgttcca
      901 acaaatgcaa aaaaaattat agacaattaa aaagagatcc tagaaagatg aaatggacta
      961 acaaatacgt taaaggcgga attaagatct ctaaatcata aaatgggatg atgatatagc
     1021 gggaaagaga aagatatatg agtgaacaaa cactaatagt tataaaacca gatgcttttg
     1081 aacgcaaatt gacaggtcaa attttgtcac gattcgaaaa taagggatta cttattagag
     1141 aactaaaatc atatattttt tcaaaagaaa aggcagaaga attttattct gtacatagaa
     1201 aaaaaccttt ttttagtgaa cttgtttctt ttatttcatc atctaaagtt gttgcctgta
     1261 ttctagaggg agaaaatgca attaatactg taagaatatt gattggctca actcgatcat
     1321 ttgatgctca accaggtaca attagagggg attatggtct tggtattaca aataatatta
     1381 tacatgcatc tgattcatat gaaagcttca taaaagagtc taaagtcatt tttaagtagt
     1441 atccacgtga cattaagaca gccagtagtt gttgtattgg ggcatgtaga ctctggaaaa
     1501 acttctttat tagataagat taggggtaca ggagtacaag cacgtgaggc tggaggtatt
     1561 actcagcata ttggagcaag tttttttccg attgaaacaa tcaaaaaaat tacagggcgt
     1621 ttatatgaac gtcttactaa aacagatgag caaattcctg gattattatt tattgatact
     1681 cctggtcatg aagtttttgc caatttgaga agcagaggag gatctgcagc agacatagct
     1741 atagtagttg cggatataaa caaaggtttt gagccacaaa caatagagag tatagaaata
     1801 ctaaaaaaaa gaaaagttcc atttgttgta gcattaaata aagtagatat gctttcagga
     1861 tggaaagaaa aaaagaaagg cgacataaag actgataaac aactgcaaat taaaacagat
     1921 atatcagcaa atttaccctt tataactgaa gaaataaaaa accaggattc acatattctt
     1981 actcttttag atgaaaaaat ttacacagtg gttggatcat tatcaagaat gggttttaat
     2041 tcagaagcat tttggcgtat taaagaattt gataaagaat tagctatagt tccaattagt
     2101 gctgtttctg gagttgggat accagagtta atgacagtat tggtaggatt ggcacaacaa
     2161 tatatgaaaa aacggttaga aagacacgat gactatatta gaggtattgt cttggaaatt
     2221 aaagaagagc aaggtctcgg tccttctgct aatatgatac taatagatgg tactataaag
     2281 caaggggata tgatcatggc tgcaaaaaga gatgaaataa tagtaactaa agttaaagcc
     2341 ttattacttc caaaaccttt ggatgaaatg cgtgacccac gagataaatt tagagccgtg
     2401 aatgaagtca tatcagcagc aggtctaaaa atagtatcgc ctgatctaga aggtatatta
     2461 gcaggtagt
//
LOCUS       DATIAS010000276         3528 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_48067, whole genome shotgun sequence.
ACCESSION   DATIAS010000276 DATIAS010000000
VERSION     DATIAS010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48067"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1564
                     /locus_tag="VLA74_05410"
     CDS             <1..1564
                     /locus_tag="VLA74_05410"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSF50183.1"
                     /translation="KRSIKMDKYSKVNNNTIDNQRSLNKIRIFDTTLRDGEQTPGVSI
                     DAEHKVNIAIKLDELGVDAIEAGFPIVSEGEKKAIKTIVKQGLKAEICGLSRSVQTDI
                     DAALACDLKYIHTFIATSEIHMKYKLNMNQDQVLDRAIWAVDYAKKHGVQVEFSAEDA
                     TRSDRNFLFKVFKAVQEAGADRIDIPDTVGYATPYYISNLVKEVSENISLPISMHCHD
                     DFGQAVANSIAGINSGASCAHVTINGIGERAGNASLEEFVMSLHCLYNKKTNIQTQLL
                     FETSKFVSNTMGIIVQPNKAIIGENAFGHESGIHTHGIINNPLTYEPISPELVGRKRW
                     LQAGKHAGAHGIKAMLNEFGINPNDKQLHQIVEQQKIVADRGKSITTGELLSISGQIM
                     GNKKFDEKFKLHDFHIVTGLNIIPTAVIQVSSEGKEYIKSEIGVGPVDAALKAIQKIA
                     VEVANIKVREYRLESITGGSDALAEVSVKVEDNLGNVVSSRKSGADVVVASVQAMMDA
                     INKVMLRKVLGS"
     gene            3058..3453
                     /gene="mce"
                     /locus_tag="VLA74_05415"
     CDS             3058..3453
                     /gene="mce"
                     /locus_tag="VLA74_05415"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HSF50184.1"
                     /translation="MRVDHIAIAVNNVEQALKNYQNILKIEKIDIEEVPNEKVRVVML
                     KLEDSRIELMEPMADDSPISKFLKEKGEGIHHIAITSDNIEDDVARAKKNGMRFLGEI
                     RSGSYGRKITFIHPKSLNGVLTEFCQSPP"
BASE COUNT         1309 a          444 c          529 g         1246 t
ORIGIN      
        1 caagaggagt ataaagatgg ataaatattc taaagtaaat aataatacta ttgataatca
       61 aagatctctt aataaaataa gaatttttga tacaacatta agagatgggg aacagacacc
      121 tggagtttca atagatgctg aacacaaagt aaacattgct attaaactag atgagcttgg
      181 agttgatgca attgaagctg gttttcccat tgtatcagaa ggagaaaaaa aagctataaa
      241 gacaattgtt aaacaagggt taaaagcaga aatttgtgga ttatcacgtt cagtccaaac
      301 agatattgat gctgcattag cttgtgattt aaaatatatt catactttta ttgctacatc
      361 tgaaattcac atgaaatata aattaaatat gaaccaggac caagttttgg atcgagctat
      421 atgggcagta gattatgcta aaaagcatgg tgtccaagta gaattctctg cagaagatgc
      481 tactcgttcg gatagaaatt ttttatttaa ggtttttaaa gcagttcaag aagccggagc
      541 tgataggatt gatatcccag acacagtagg ttatgctaca ccttattata tatctaattt
      601 agtaaaagaa gtttcagaaa atatatcctt accaataagt atgcattgtc atgatgattt
      661 tggtcaagca gttgcaaatt ctatcgccgg aataaattca ggagcatcat gtgctcatgt
      721 aaccataaac ggaattggtg aaagagcagg aaatgcatca cttgaagaat ttgttatgtc
      781 attacattgt ctatataata aaaaaacaaa tatacaaaca caactactat ttgagacatc
      841 taaatttgtt tctaatacaa tgggaataat tgttcaacct aacaaagcaa ttataggtga
      901 aaatgcattt ggtcatgaat ctggaattca tactcatgga atcattaata atcctttaac
      961 ttatgaaccc attagtcctg aacttgttgg gcgaaaaaga tggttacaag cagggaaaca
     1021 tgcaggagct catggaatta aagcaatgtt aaatgagttt ggtataaatc ctaatgacaa
     1081 acaattgcat caaatagttg aacaacagaa aattgttgca gatagaggaa aatcaattac
     1141 tactggagag ttgttatcta tatcaggtca aattatgggt aataaaaaat ttgatgagaa
     1201 atttaaatta catgattttc atattgtaac aggattaaat attattccaa ccgctgtaat
     1261 tcaagtgagt agtgaaggta aagaatatat taaatcagaa ataggtgttg gacctgtcga
     1321 tgctgctctt aaagcaattc agaaaatagc tgtggaagtt gctaatataa aagtaagaga
     1381 atatagactt gaatctatta caggaggatc tgatgctcta gcagaggttt cggtcaaggt
     1441 tgaagataat ctgggaaatg ttgtttcttc aaggaaatct ggagctgatg tagtagtagc
     1501 ttctgttcag gccatgatgg atgcaatcaa caaggtaatg ttaagaaaag ttttagggtc
     1561 ataaaatatt aattattaat ttaatttgat tttaagtaat ttacttattg gaaacgtatt
     1621 aataatctca gattctttag caaaaatgag aaggaataga tgcctcaaca atatataagt
     1681 tatccaagta ttatctgaaa tatctaaata acttttctca aatacttcta cttctgttga
     1741 ggaaatgatg aagaaatttt ttatccattg taaatctaat ttaataatta agttgattgt
     1801 ttcatttatt tgatcaaata attgctcttt aggcaaacta tcaataatta agacttttag
     1861 tatgatctat tattggaata tatccgaatc taattgcttt taaggtatca ttgtcaattt
     1921 tatattaact agtatcaatg gaagctgttg actgggattg aagatccatt ttaatgaatc
     1981 ataattaaca atgaattgaa tagagtaata tcttgttcaa acagatcttc aaaattttac
     2041 aattcatctt tatattctct tatctctgaa gaaataaaat tacaacttaa tttatactat
     2101 attatattct ccccgttcct gcaattagtt tattattttc atcagattaa ctaatcattt
     2161 gagcgacaat gctttaagat atctattttt caattcaata ccatgttctt catactagga
     2221 aaatattaag aataaaccat ataaaatagt gaatttcatc tttaggatta atagtattac
     2281 taaaaaatca acaccgccaa caatgtcttt cattcttctt taaaggatgc aacttataat
     2341 tttaatgcat attctttcaa tacttattat tttaaaaaaa aatttgtctt ttttagaatg
     2401 gaatataact ccaaaaagaa atctttctct cagtttttta atttaatgat tttattttat
     2461 tcataatgac atcttcttgc tttctagtta atccttatat attttttgat tttccttata
     2521 taatgcttta atataattct tatattgatt ctctatttag aacatatata tttagcatat
     2581 tatattggtc tgatgaccat ctcttgcaaa gaataaaaat catctacatc aatagaactt
     2641 gggattttaa atcttcataa tattgtaatt ttcttgactt tgttatctat taaagcaata
     2701 gatttgccta tagagggaat taaagtgact atttattcct ctttttgata tattattttt
     2761 cattattaga tttatatgtg atctagctta atataatact tttattataa cttttatgtt
     2821 ttaatttctt tcatactaat tattgaatat caatttaaat agattattaa taatttctaa
     2881 aattttgaaa tcaagatcca tcatacggat atgttttcat tgtaaatata gtattttccg
     2941 atcttttatc taacaattta atatttttta ggttttttat taaaaattaa tatattaatt
     3001 tctgacattt aaaattagaa aattaatata actatcacat agatcatatt tagagatatg
     3061 agagtggatc atatagctat tgcagttaat aatgtagaac aagcacttaa aaattatcaa
     3121 aatattctta agatagaaaa aattgacatt gaagaggtac caaatgaaaa ggtacgtgtt
     3181 gttatgctca aattagaaga tagtagaatc gaattaatgg aaccaatggc agatgatagt
     3241 cctatatcca aattccttaa agaaaaagga gaaggaatac atcatattgc cataacttct
     3301 gataatattg aagatgatgt agctcgcgca aaaaaaaatg gtatgagatt tcttggtgaa
     3361 ataaggagtg gatcatatgg tagaaaaatt acctttattc accctaaatc attaaatgga
     3421 gtattaacag aattttgtca atcgcctcca tagaataaat agtatttgat agatttctat
     3481 ataataaatc ttgcaaaaat ttctgctttt tcaataaata gccaaaat
//
LOCUS       DATIAS010000277         2882 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_48131, whole genome shotgun sequence.
ACCESSION   DATIAS010000277 DATIAS010000000
VERSION     DATIAS010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48131"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(521..949)
                     /locus_tag="VLA74_05420"
     CDS             complement(521..949)
                     /locus_tag="VLA74_05420"
                     /inference="COORDINATES: protein motif:HMM:NF013994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding domain-containing protein"
                     /protein_id="HSF50185.1"
                     /translation="MSSSEKISKFPSDLRLEIQVSSSINASEDPSKVLDVINLIIGEV
                     GIEYRKYGNNLVIGKSNNYKVLNSIYEQVRNRSVISVLRRLLLSHLQENVTWFYVNKQ
                     AATKGIIVLVDNEEESPLGPIKISIKSENILNVIGWLCPE"
     gene            complement(952..1554)
                     /locus_tag="VLA74_05425"
     CDS             complement(952..1554)
                     /locus_tag="VLA74_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50186.1"
                     /translation="MLINCGDYQIKRKFIICLTGMPGAGKTTVAKALEEEGFTLLNMG
                     DSVRMEAKKRKLQPTDENLGYLMLKLRNDLGPGAIATLIISQISEKYNDELHCKFVID
                     GIRSIHEIDLLKTIGVVKILSIHGSIDTRFRHLKDRSRSDAPSTLKECLIRDKRELSV
                     GVSEAIAFADEIISNNEISLNQLKEQAKQISRNWLLSIRC"
     gene            1997..2164
                     /locus_tag="VLA74_05430"
     CDS             1997..2164
                     /locus_tag="VLA74_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L40e"
                     /protein_id="HSF50187.1"
                     /translation="MPITDAIKKQIAQQRRLFYKICFKCGGRNPISSGRCRKCHSQHM
                     RLKNRNVGAKK"
     gene            complement(2254..>2882)
                     /locus_tag="VLA74_05435"
     CDS             complement(2254..>2882)
                     /locus_tag="VLA74_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF50188.1"
                     /translation="AIADERLIPNISRIIKSGPDNFIGIQCGFETGSIRLIGKYADRK
                     LAPFKPSEWHWVVKEGVKTLNEHYWVPAFTLIMGLDNNETIDDSWETIRLIHELEQEQ
                     PDSKFTVTPLTFVPIGLLEKSDFFDIGNTMDAGKLGVMYKTWQHNFSHGIQKFMSKVG
                     RDNPIKNTFFSGLAKTLGGIPLSSMEKFARKKGPEHERAIEKIKANYW"
BASE COUNT          956 a          494 c          412 g         1020 t
ORIGIN      
        1 ttttatttgt aatgaaaaaa tatttgatgg taaatcattt ttttgaaagc tcgatcaaac
       61 tttaaaagaa acatgaaact attacaagta actactataa tatgatttag ttatctatta
      121 tagtcaaata tgactaggtt acctccgggt ccgattgtat cgctcttcaa ataaaagcta
      181 tttaatagga aagatgtcta ttactctagc gatattgcca gtctcacgtc ttgctgcata
      241 cccaatattg acgaagaaag cgaaacccta ttttcccacc tatcctctgt tgagcaggct
      301 ttacataagg atcagaagat tgaaaaattg caatgcctag cagaattgtg attagttctt
      361 attcccgcta atggactaaa atttttttat ttttaagata tttagactaa ttaatattct
      421 tatagtctta ttatatgcca gattgtgcag atttttatcc ctctcaaatt aatgatgaat
      481 caagtgataa agattgatag aactagaaaa taataaacat ttattcagga caaagccaac
      541 cgataacatt taatatattt tcacttttaa ttgatatttt aattggtccc aatggcgatt
      601 cttcctcgtt atcaactaag actattatcc ctttggtggc tgcctgttta ttaacataaa
      661 accaagtcac gttttcttgt agatgagata ataatagtct tcgaagtaca gatataaccg
      721 atctatttct aacttgttca tatatggaat ttagaacttt atagttattg gattttccta
      781 ttaccaaatt gtttccatat ttcctatact caatgccaac ttcaccaatt attaaattaa
      841 tgacatccaa taccttagaa ggatcttctg atgcatttat tgaagatgaa acctgtattt
      901 ctaatctgag atcagatgga aatttgctta tcttttcaga tgatgacatt tttaacatct
      961 aattgatagt aaccaatttc gtgatatttg ttttgcttgt tcttttaatt gatttaagga
     1021 aatttcatta tttgagataa tttcatctgc aaacgctatt gcttcactca ctccaacaga
     1081 tagctccctt ttgtctctta ttaaacattc ttttagagta gagggagcat cacttctaga
     1141 acgatctttt aagtgtctaa atctcgtgtc aatagaccca tgaattgata agatcttcac
     1201 tacacctatt gtctttaaca aatctatttc atgaatgctt cttataccat ctattacaaa
     1261 tttacaatgc aattcatcat tgtatttttc ggatatctga ctaataatta aagtagcaat
     1321 agctcccgga cctaaatcat ttcttaattt taacataagg tagcccaaat tttcatcggt
     1381 aggttgcaat tttctttttt ttgcttccat tctaacagaa tcgcccatat ttaggagagt
     1441 aaaaccttct tcctctaatg cttttgctac tgtagttttg ccagctcctg gcattccagt
     1501 taagcaaatg ataaatttcc ttttaatttg atagtcacca caattgatta gaataaaacc
     1561 agatctgtta tcaaccttat gctataaatg gaaaaaagtt tttcgaaaat caatcgtcca
     1621 aatcatttgt agacgtatta aatacggata acatcgagtt ctggataaga agattaaaga
     1681 agagatagac attctagaat cctatttatt tttatgaaat ccattatatc atatttggct
     1741 atgacgtgat agatataaat ggtgtcaaat attcaattag tgctttgaaa ataattttgg
     1801 ttctaaaaaa tttttggtaa aaattcacta ctaaatgtca tgagatagta gtattctacc
     1861 ttaatgcctg actgtgatac aagaaaactg aaaacataga attactgaat ttatattatt
     1921 caccatgtga tttcttgaat attaactaga aataaaagaa aaatacaaat actcaaaact
     1981 tcaatgtgtt tacatcatgc caataaccga tgccataaaa aagcaaatag cccaacaaag
     2041 aagattattt tataaaatat gttttaaatg cggtggtaga aatcctattt catccggcag
     2101 atgtcgaaaa tgccacagcc aacatatgag attaaagaat agaaatgtag gagctaaaaa
     2161 ataagatttc ctagtgacat tactattgaa tactagatcg aattattaaa ctatcgttat
     2221 acagttcgaa tgtaaatagg aaaaaagaaa aaactaccag taattcgctt ttattttttc
     2281 tattgctctt tcgtgttctg gacctttttt tcttgcaaac ttttccatag atgacaaagg
     2341 aatacctcct aatgttttag ctaatcccga gaaaaaggta tttttaattg gattgtcacg
     2401 ccctaccttt gacatgaact tttgaattcc atgactaaaa ttatgttgcc atgttttata
     2461 cataactcca agtttcccgg catccattgt atttccaata tcaaaaaaat ctgatttttc
     2521 aagtaacccg ataggaacaa aagttaaggg tgtaacggta aactttgagt cgggctgttc
     2581 ttgctctagt tcgtgaatta atctaatggt ctcccaactg tcatcaatag tttcattatt
     2641 atctagtccc attatgaggg taaaagcagg aacccaataa tgctcattca gagtttttac
     2701 cccttcttta actacccaat gccattctga tggtttgaaa ggagctaatt ttctatcggc
     2761 atattttcca attaacctaa tactgccagt ttcgaatcca cattggattc cgatgaagtt
     2821 atctggccca gactttatta ttcttgaaat atttgggatc agtctctcat ctgcaatcgc
     2881 ac
//
LOCUS       DATIAS010000278         4996 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1139103, whole genome shotgun sequence.
ACCESSION   DATIAS010000278 DATIAS010000000
VERSION     DATIAS010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139103"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            506..1441
                     /locus_tag="VLA74_05440"
     CDS             506..1441
                     /locus_tag="VLA74_05440"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSF50189.1"
                     /translation="MEKQQNIAVVTGSSTGIGFETSLLLARNGFYTYATMRDTGKSDI
                     IEKITYTENLPLEVLPLDVDNDNSVKNVIHKILDEKKKVDILVNNAGYGLFGTLEDIT
                     IEEVKKQFETNLFGAIRTIKEVLPSMREQKNGIIINISSMSGFICIPATSVYVSTKFA
                     LEGLSESISYELQPYEIKVILIEPGVINTKFVSNIKFQNLNNNKLQQPLLKEEEKEES
                     KVNYSNNDIKQKNSSYYSNTIDTFLSHYYPAMKNAPLPKEVATVILEAIKNASESSES
                     LVRYIVGEDDKNLAQAKRNMSDSQLHEFISNKLLG"
     gene            complement(1565..2338)
                     /locus_tag="VLA74_05445"
     CDS             complement(1565..2338)
                     /locus_tag="VLA74_05445"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HSF50190.1"
                     /translation="MKDKEENSRVISNNHKIPDSDLILDILGNSTRRRILILLSKEPL
                     YFNQLSKIIGIGQQSILRHMKILEDSGLIETYTQESNLGAPDRKYYRLASTFSMSMVF
                     SKDGFSIRNNEIKELRYKEFEKFYKEYERYISEYYNTKNKNFHRTGLLLDLFKHTLNE
                     IDKEVSNFESKINDLQALRQMILRDIHKIGKDNFEFSERQIIYSFVDKRTPSSVAELT
                     DILNENETDIKNSVKNLITRRFKEDKTSIFESLKKYKKL"
     gene            complement(2328..4106)
                     /gene="thsB"
                     /locus_tag="VLA74_05450"
                     /pseudo
     CDS             complement(2328..4106)
                     /gene="thsB"
                     /locus_tag="VLA74_05450"
                     /inference="COORDINATES: protein motif:HMM:NF012346.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
     gene            4275..4781
                     /locus_tag="VLA74_05455"
     CDS             4275..4781
                     /locus_tag="VLA74_05455"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSF50191.1"
                     /translation="MATSQMSRKNKDAERREVMVRRPFDEIFDNFRQDMEDAFFAPFI
                     NPIRSSIPGNMSSIETRTPLCDIMDKGNRYIISLEVPGIQKDKIEVKATGEYITIAGS
                     EEKKNEKEEGNYVLNERAYRSFFRKMPFPENIIPTKVEATVEDGILKIELPKQKPTST
                     EETNIKIK"
BASE COUNT         1750 a          750 c          643 g         1853 t
ORIGIN      
        1 tgatttgaat taaaatcatc agaattatca atatcatttg caaatatttt tattttatta
       61 tctataactt ctgatagact agtagtagat gaatttaaaa tattattatt catagttatc
      121 atgatataat atagtatagt gagaacgtta ttatactttt ataaaatatt tttagattat
      181 ttttttgctc tttccattat caacaatgat gaacaaacaa ttgtcaaatc attatgtctg
      241 gacaatagtt attagttatt gtatattagt tcaaaatcta atttgtaaaa acaaacctat
      301 tcctctttat tactataaca ttagagtctt attttagaac cgctataggt atttgcaaat
      361 aaaataaaac caattgtact ttttgtatgt aattagtagt agtaagttag acgtatattt
      421 aaaggaacaa ctataattac cataaatcta ttgttatgat caactatagg aatatatttt
      481 ctctttttgt aattgcctaa ctaggatgga aaaacaacaa aacattgcag tagttactgg
      541 cagttcaaca ggaataggat ttgaaacgtc attacttctt gcaagaaatg ggttttatac
      601 atatgctaca atgcgagata caggtaagag tgacataatt gaaaaaataa cgtatacaga
      661 gaatctccct ttagaagttt tacccttaga tgtagataat gataattcag taaaaaatgt
      721 aatacataaa atacttgatg aaaagaagaa agttgacatt ttggtaaata atgcaggtta
      781 tggtttattc ggtactttag aggacataac catagaagaa gtaaaaaaac aatttgagac
      841 taatctcttt ggtgcaataa gaactattaa agaagtttta ccctcgatga gagagcagaa
      901 gaatggaata ataataaata ttagttcaat gtctggcttc atttgtattc ctgcaactag
      961 tgtatatgtt agtacaaaat ttgcattaga gggattaagc gaatctatat cctatgaact
     1021 tcaaccatac gaaattaaag taatccttat tgaaccaggt gttatcaata ctaagttcgt
     1081 atcaaatatt aaatttcaaa atctaaacaa caataaatta cagcagcctc tattgaaaga
     1141 agaagagaaa gaagaatcaa aagttaatta ttctaataat gatattaagc aaaagaattc
     1201 ttcatattat tccaatacta tagatacatt tctatctcat tattatcctg ctatgaagaa
     1261 tgctccttta ccaaaagaag ttgctactgt aatacttgaa gcaattaaaa atgcttcaga
     1321 gtcttcagaa tctttggtca gatacatagt aggagaagat gataaaaatc tagcacaagc
     1381 aaaaagaaat atgtctgatt cacaattaca tgagtttatt tcaaataaat tgttaggtta
     1441 attattgcta tcataaaaag aaaaaaaatt tctttataaa tcaaatgttt tcattgataa
     1501 aactgttttt tagtcagagg actaacataa ttaattggat atttctatta tatatggtat
     1561 caattcatag ttttttgtat ttctttaaac tttcaaaaat tgaggtctta tcttctttaa
     1621 atctacgggt aataaggttt ttaactgaat ttttaatatc tgtctcattc tcattaagaa
     1681 tgtcagttaa ttctgcaacg gaagaaggtg tacgtttatc gacgaaagaa taaattattt
     1741 gtctttctga gaattcaaaa ttatcttttc caattttatg aatatctcgt aaaatcatct
     1801 gtcttaatgc ctgaagatca tttattttac tttcaaaatt ggatacttcc ttatcaattt
     1861 catttaaagt atgtttaaat aaatctaata ataagccagt tctgtgaaaa tttttatttt
     1921 ttgtattata gtattctgaa atgtaccttt catattcttt ataaaatttt tcaaattctt
     1981 tatatcttaa ttctttaatc tcattatttc taatagaaaa accatcttta gagaaaacca
     2041 tactcatact aaaagttgaa gcaagtcgat agtattttct atctggtgca cctaagttac
     2101 tttcttgtgt atatgtttct attaatccag aatcttctag aattttcata tgacgaagaa
     2161 tagattgctg tcctattcca attatttttg ataattgatt aaaatataac ggttcttttg
     2221 aaagcaaaat taaaattctt cttctagttg aattacctag aatatctaaa attaaatcac
     2281 tatctggaat cttatgatta tttgaaatta ctctagaatt ttcctcttta tccttcaaat
     2341 tcttctattc cctttaacaa ataaaataaa atattaatca tttttaactc ttttttattt
     2401 ttgtttctat tacctatcaa aaaaatatta attttgtttt ttttacatat cagactacca
     2461 tccatacctg ctcccatgtt tccgctgcta tgagacgaac cagacgatgt ctttgattta
     2521 ctggcagcaa ttacattatc aattctaagt atcattgatg aggcttctgt tgcagcatta
     2581 atcacttgtt cttttactgc aagtggttcg aatatttcct ttatggaaac atcagatatc
     2641 tttgcattaa gtacgtctat cccatatttt ggtttgctgc tagtcgaaac tttagctcgt
     2701 agttgaacct gagtatcaat tggatccatt cctgcatttt cagctaaagt taatggaata
     2761 gattcaagtg cttctacgaa tttctctgct gataattgtt ctctaccatc taatttattg
     2821 gaccattctc taagtttatg agatataaat gcttcaggtg ctcctgctcc agtgataata
     2881 tatggatatt ctattacgtc ttttacagac ataagcgcat catgaatact tctctccact
     2941 tcatctatga ctcgttgaga tccacctctt actaaaaaag ttacagattt aggattttgg
     3001 caatcctcta caaataccca tttatctgtc tcaatatgtc tctcttctac caaattagca
     3061 tgaccaaggt ccttaacagt aagatcatta agattggtaa tcaaccttcc tccggttgcc
     3121 tttgataatt tgtacatatc actttcttta actcgtctaa cagctaatat tcctgattta
     3181 gccaaataat gctgtgccat ttcatcaatt cctttttgac ataatactac attcgcctct
     3241 actgctgaaa ttttatcaac cattgctttt aacatcatat tttcttcatc aatgaatttc
     3301 tgaatttgtt taggattatt gatatttatt tttgcatcaa attcagtttt ctcaatttct
     3361 aaaggacaat taatacaatt ttagcatttt caattctctt tggcattccg ccatgaacaa
     3421 tctccttatc taaaacaatt ccattaatta gtttgtatct ctgattgaac cacctgtttt
     3481 ttttcaactt tgacattatc tatatctact ttgaattttt ctatattctc atttgaattt
     3541 cgattttcta aaatagataa tattgcattt acaactaatt gagataattc gggggaaata
     3601 tttgcagtga gtttcgatga catagaagta cttgcaattt tttttaaata atctttattt
     3661 gtaggaggat caatcttttc tgaattttgt tttagtagtt caatggcttt ttctgcactt
     3721 tttctatatc catctacaat tacagtagga tgaacatttt tgtttatcaa ctcttcagcc
     3781 ttttcgagta gcgaacctgc taaaacaact actgaagttg taccatcacc aacctcgtta
     3841 tctacacttt ttgtaatttc taccatcatt tttgcagcag gatgttcaac atctatttcc
     3901 ttaagaatag tagctccatc atttgtgatc gtaacatcac ctaatgtgtc taccaacatt
     3961 ttatccatac ctcttggacc taaactagaa ttgatcattt gagtaacaag tttagctgcc
     4021 gtaatattat ttctttgagg aaaaaaagaa tcctttgttt cagtacttcc ttctttcaac
     4081 aaaagaattg gaatttgaga tgacataccc aatattctcc tttgttacta acataataga
     4141 tgtaagaatt ttataaattt tactaaaagt aacttataac gtatattaaa caaaatttac
     4201 taaattaaga taaccacttc ttgttagtaa caaataaata atacttaatt aactattatt
     4261 aatgaaaact acaaatggca acatcccaaa tgtctcgaaa aaataaagat gctgaacgaa
     4321 gggaagtgat ggtacgtcga ccctttgatg aaatctttga taattttaga caagatatgg
     4381 aagatgcctt ttttgctcct tttataaatc ctataaggtc tagcatacca ggaaatatga
     4441 gctcaattga aacacgtact ccattatgtg atattatgga taaaggcaat agatatataa
     4501 tttctttaga agtacctggt atacaaaaag acaagataga agttaaagca acaggggaat
     4561 acattacaat tgctggatca gaagaaaaga aaaatgaaaa ggaagaagga aattatgttc
     4621 tcaatgaaag agcttataga tcatttttta ggaagatgcc ttttccagaa aatatcatac
     4681 ctactaaagt tgaggctaca gtagaagatg gcattttaaa aattgaatta cctaaacaaa
     4741 aaccaacctc cactgaagaa actaatataa agataaaata agtaataatc atactttatt
     4801 attttttagt caaaaataaa ttttttattc aaatattata atgctaagaa aatagatatt
     4861 aataagctta tccattatta tatatatatt aattaacaat aatctatgaa taatcaataa
     4921 ttaaatttag ttttataaaa tattttatta ttaaaacttt atttgatctt aaagataaga
     4981 atattttctt caagat
//
LOCUS       DATIAS010000279         3299 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_729656, whole genome shotgun sequence.
ACCESSION   DATIAS010000279 DATIAS010000000
VERSION     DATIAS010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3299
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729656"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..2228)
                     /locus_tag="VLA74_05460"
     CDS             complement(156..2228)
                     /locus_tag="VLA74_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minichromosome maintenance protein MCM"
                     /protein_id="HSF50192.1"
                     /translation="MSELQKTESALVNDLEEFLRAFKDRTGNYKYFDRINNLMAANSI
                     SLVVDYIDFDTFKPELAKLITNEPDEMFDAFNKAIFNVLYEIHPDYANEIQNNIKVRI
                     GNYTVQKSLREINAEVINKLVGVSGMVVRSSEVKPLAKKIGYRCLNCGGITEAQLQGL
                     VLKKPLKCGKCSEKELEMDPDTSLFTDFQMVRLQELPEDLPAGHLPHYLEVTVIGDLV
                     DQCRPGDRILLTGIVRIEQEQLSQQIKTTLFRLRMEGNNIEYLGGRTADKDNRTIERL
                     EINSEDEKHIFALARKNDAYDILISSFAPHVYGHEVIKEVILLLIVGSVTKRLNDGSA
                     RRGDINVLLVGDPGTAKSEMLKFAAKIAPRGLYTSGRGSTAAGLTAAVIRDKSGIMML
                     EAGAVVLGDQGLVCIDEFDKIKPEDRSALHEVMEQQTCSVAKGGIVATLNARTSILSA
                     ANPLYGKYDPFKNITENVNLPIPLLTRFDIIYVIRDIPEKEKDHRIASHILELHRESE
                     STGQYLIDIDLFSKYLAYSKTMEPKLTVEAIDKIRDYYMKMRNVESDGMITVTPRQLE
                     GLVRLATARSKLLLKDYVDSDDAERAIYLIQTMLETAGVDVNTGRVDLGVLHGKPQSE
                     ISKLKLFMEVFNALSGQDKSDVEEKNFINELIQTGRFSEDDAKNFLNKAMQNGQIYER
                     RSGFYAKA"
     gene            complement(2225..2797)
                     /locus_tag="VLA74_05465"
     CDS             complement(2225..2797)
                     /locus_tag="VLA74_05465"
                     /inference="COORDINATES: protein motif:HMM:NF017704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50193.1"
                     /translation="MDQVIIAHNNDNFDHYDHFKKQIDFVQKFYNIKYLMEEIRITFK
                     KNFSIHIDGLTLEAKEGEISSIPRWLAQILEENNSIEIQDMDVLIYISRSLNRERISK
                     PHDLSGIDLDFYIRANDFIKRLKDKEKESILVSLNSFVTSRIEKIVKLAAASSLSVDL
                     EKKLSAEEKELYNFIHKSSSEFKQRAVNKS"
     gene            2887..>3299
                     /locus_tag="VLA74_05470"
     CDS             2887..>3299
                     /locus_tag="VLA74_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50194.1"
                     /translation="MIIIILLYSIRLERKEDINYENLDIQVKMIQNTINTKLSSLMWV
                     EKYRPKRIEEIVNQKDIIISLKNLVKKPNEIPHLLFAGPAGVGKTTTALCLSMELLGE
                     GWKRDTLELNASDERGIKMVRERVKEFAAVIKLPSG"
BASE COUNT         1084 a          539 c          420 g         1256 t
ORIGIN      
        1 tctcaaagta tacataaatg actatataat tatagtattt tcctctatta ttttattaat
       61 atcacattca attaattatt tattcatatt attaatttaa tctagtataa acaattattt
      121 atattattta gtatataaaa ataataatat actttttacg ccttagcata aaagcctgaa
      181 cgtcgttcat atatttgtcc attttgcata gctttattca gaaagttttt ggcatcatct
      241 tctgaaaacc ttcccgtttg aattagttca tttataaagt ttttttcttc tacatcactt
      301 ttatcttgtc cagataaagc attaaaaact tccatgaata attttaattt tgatatttca
      361 ctttgaggtt taccatgtaa aactccaaga tctactcttc cagtattaac atctactccc
      421 gccgtttcta gcatagtttg aattagatat attgcacgtt ctgcatcatc ggagtctaca
      481 taatctttta ataataattt tgagcgagcg gttgctaatc ttactaatcc ttcaagttgt
      541 cttggtgtaa cagtgatcat accatccgat tctacatttc tcattttcat ataataatct
      601 cttattttat ctatagcttc aacagtcaat tttggttcca tagtttttga ataagcaagg
      661 tatttactaa agaggtcaat atcaattaga tattgaccag tactttctga ttctcgatgt
      721 aattctaata tgtgactagc aatacgatga tctttttcct tttctggtat atctctaatt
      781 acataaataa tatcaaatct tgttaataat ggtattggta agttaacatt ttctgtaata
      841 tttttaaagg ggtcatattt gccatataaa ggatttgcag ctgataatat agaagttctt
      901 gcattcaatg tagcaactat ccctcctttt gccacagaac aggtttgctg ctccataacc
      961 tcatgtaaag ctgaacgatc ttctggtttt attttgtcaa attcatctat acatactaaa
     1021 ccttggtctc ctaatactac tgcacctgct tccaacatca taataccaga tttatctctt
     1081 attactgctg cagttaaacc tgcggcagta gaacctcttc cagaagtata taatcctctt
     1141 ggagcaattt ttgctgcaaa tttcaacatt tctgattttg cagttccagg atcacccact
     1201 aaaagaacat taatatcgcc tctcctagca gatccatcat ttaatctttt tgttactgat
     1261 cctactatta ataataaaat tacttcttta attacttcat gtccatatac atgaggagca
     1321 aaagatgaaa ttaatatatc atatgcatca tttttacgtg ctagtgcaaa aatatgtttt
     1381 tcatcctcac tatttatttc caaacgttct attgttctat tatctttatc cgcagtcctt
     1441 ccacctaggt attcaatatt atttccttcc attcgtaatc taaatagagt tgttttaatt
     1501 tgttgtgata attgttcttg ttctattctt acaattccag ttaataagat tctatcacct
     1561 ggtctgcatt gatctacaag atctcctata acggttacct ctaaataatg tggtaagtga
     1621 ccagcaggaa gatcctctgg aagttcttgc aatcttacca tttgaaaatc agtgaaaagg
     1681 ctggtatctg gatccatttc tagttctttt tcagaacatt taccacattt tagaggtttt
     1741 tttaatacta atccttgtaa ttgagcttct gttattccac cacaattaag acacctataa
     1801 ccaatttttt tggctaatgg ttttacttca gatgatctaa caaccattcc cgaaactcca
     1861 acaagtttat tgatcacttc agcatttatt tcacgtaaac ttttttgtac cgtataattt
     1921 cctattctga cctttatatt attttgaatc tcatttgcat aatctggatg gatttcataa
     1981 agaacattga atatagcttt attaaatgca tcaaacattt catcaggttc attagtaatt
     2041 aattttgcta actctggctt aaaagtatca aaatctatat aatcaacaac aagcgagata
     2101 gaattggctg ccatcaaatt attaattcta tcaaaatatt tataattccc agttcgatct
     2161 ttgaaagcac gtaaaaattc ttctaaatca ttaaccaatg cagattcagt tttttgaagt
     2221 tcactcaaga cttattcact gccctttgtt taaattctga agaagattta tgaataaaat
     2281 tataaagttc tttttcttcg gctgaaagtt tcttttctaa atcaacagat agcgaagatg
     2341 cagctgctaa tttaacaatt ttttctattc tagaagttac aaatgaatta agagaaacta
     2401 gaatagattc tttttcttta tcttttaatc ttttgataaa atcattagcg cgaatgtaaa
     2461 agtctaaatc aataccagaa agatcatgag gttttgatat tctttctcgg tttaaagatc
     2521 gtgagatata aattagaaca tccatatctt gaatttctat agaattattt tcctccaaaa
     2581 tttgcgctaa ccatctagga attgaactta tttctccttc ttttgcttca agagtcagac
     2641 catcaatatg gatagagaaa ttttttttaa atgtaattcg tatttcttcc attaagtatt
     2701 taatattata aaatttttga acaaaatcta tttgtttttt aaaatgatcg taatgatcaa
     2761 aattatcatt attatgagct attataactt ggtccaatct attttataat attatttcat
     2821 tcaagactaa taattctttt tagcaaatta gatttgagta attagtataa taaatctcat
     2881 ttttatatga ttattattat tttattatat tcaataagat tagagagaaa agaagatatt
     2941 aactatgaaa atttagatat tcaagttaaa atgatccaaa atactataaa tacaaaactt
     3001 tccagtttaa tgtgggtaga aaaatatcga cctaaaagaa ttgaagaaat agttaaccaa
     3061 aaagatatca taatttcact taaaaattta gttaaaaagc ctaatgagat accacattta
     3121 ttatttgctg ggcctgccgg tgtaggtaag actactacag cattatgttt atcaatggaa
     3181 ttattaggag aaggatggaa aagagatact cttgaactta atgcatctga tgaaagagga
     3241 ataaagatgg ttcgcgaaag ggtaaaagaa tttgcagctg taattaaact tccaagtgg
//
LOCUS       DATIAS010000280        15804 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1003043, whole genome shotgun sequence.
ACCESSION   DATIAS010000280 DATIAS010000000
VERSION     DATIAS010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 15804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15804
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1003043"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VLA74_05475"
     CDS             complement(<1..386)
                     /locus_tag="VLA74_05475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HSF50195.1"
                     /translation="MVLPVKIGLEIHCQLTELNSKLFCSCYSNYRGKDINENICPVCI
                     GLPGSLPILNKKAIEHAIMTSKALNCKVPEITMFSRKNYFYPDLPKNFQITQYDSNET
                     DTSIGKNGIVFYGNNKKTRIRRIQLE"
     gene            complement(386..1843)
                     /gene="gatA"
                     /locus_tag="VLA74_05480"
     CDS             complement(386..1843)
                     /gene="gatA"
                     /locus_tag="VLA74_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HSF50196.1"
                     /translation="MSNLPKLDVQGVVEGIRNGCFTAEEYISSLLDRIEKIDKKINAF
                     ITLNKSAINQAKEIDKKIKRGDPVGSLAGIGIGIKDNISTINLKTTCASKMLSEYVPP
                     YNATVVKKLLDKDAIIIGKVNLDEFAMGSTTEWSFFGLTRNPWNTGYVCGGSSGGSAA
                     SVAAQLCTVSLGSDTGGSIRCPSSFCSVVGLKPTYGLVSRYGLISYSNSLEQIGPIGK
                     NVSDVREIFSTISGKDFNDNTTLDNNIYNHNAVNNKSYNNKKIKIGLIKELIDGADID
                     VSKCIYSSLDVFNNLDFECEETSLKSTEYALASYYTIATAEASSNLARYDNIRYGFEL
                     DPEEYEWNVYFSKVRGNFGNEVKRRIIVGTYVLSSGYYGKYYLKAQKARSMIKTELKQ
                     LFKKYDLLISSTVPVLPFKIGEKIDDPLMMYLIDVNTVLANLSGIPAVSIPAGFKDGL
                     PIGIQIMADELEEEKLFNSGELFEKSININSYPDL"
     gene            complement(1845..2117)
                     /gene="gatC"
                     /locus_tag="VLA74_05485"
     CDS             complement(1845..2117)
                     /gene="gatC"
                     /locus_tag="VLA74_05485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HSF50197.1"
                     /translation="MITKDELKHLSKLSKIELSEEEYETYLKQIEKIVGYLDKLDEIS
                     LNEMESYSMIKKISDLREDKVNEFDRDIQKVIKNKKDKFVRGPQMN"
     gene            complement(2137..3504)
                     /gene="aspS"
                     /locus_tag="VLA74_05490"
     CDS             complement(2137..3504)
                     /gene="aspS"
                     /locus_tag="VLA74_05490"
                     /EC_number="6.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004815 - aspartate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006422 - aspartyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA(Asn) ligase"
                     /protein_id="HSF50198.1"
                     /translation="MKLDDMLKEEELGKWRKNQYSSDIDPSFEGKIVTLMGWVSSVRD
                     HGNIQFILLRDKEGDLQVIAKKGQCSDDIYYQISKIREHTSMAIRGKVISQKKAPNGV
                     EIMPLELKIFSIPIKAPPFMIQHKDPAGIDTRLDFRAIDLRRKHLQNIFIIRDSVLKF
                     TREFLANERFIEVNTPKIIATASEGGTALFPIFYYDREAFMAQSPQIYKEQLTLSFEN
                     VFEIGPIFRAEPSRTNRHLSEATSIDIEKAFVDYNDIMIMLEKFIKYVIKSLKENNPK
                     EIAELELDSNIINNVMIDNTGTESFPRYKYSDMIERIRESGERIRWGDDISPQLINKL
                     EDEKLNGFYFIVDWPSSTKPFYVKEKISDPKICESFDLMYGSLEISSGSTRISNKDVL
                     VNRMKKKGLNLNSFDYHLRIFDYGVPPHAGCGIGLERLLMTITKVDNIRDTILYPRDI
                     DRLSP"
     gene            3729..4070
                     /gene="trxA"
                     /locus_tag="VLA74_05495"
     CDS             3729..4070
                     /gene="trxA"
                     /locus_tag="VLA74_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSF50199.1"
                     /translation="MGNNENLLHVDKDSWEAEVINSQLPVFVDFWAEWCGPCRMVGPA
                     VEQLSKILDGKVKIAKVNVDENQEIAVKYGIHSIPSLLLFKNGNEIARTVGAAPKEAY
                     QKFIEESLAKN"
     gene            4159..6906
                     /gene="alaS"
                     /locus_tag="VLA74_05500"
     CDS             4159..6906
                     /gene="alaS"
                     /locus_tag="VLA74_05500"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HSF50200.1"
                     /translation="MGKKEISTLFSSDPDKYYRVSLFDTVGFKRHKCINCGKFFWSIL
                     DKEVCPDHEKYDFIGNSPTTKRFDYVNAWKEVEKYFRSEKHSIVRRYPVVCRWREDLY
                     FTIASIVDFQRIIGDKVIFELPSNPLVVPQMCLRFNDVENVGVSGRHYTSFCMIGQTC
                     NANTPGGYWKDRCIELDFNLLTKVLGINQNEITFVEDVWMGAGAFGYSLEYFVRGLEL
                     GNAVFTEFEGDENNYRIMKNKIIDMGAGLERFSWITMGTPTSYDCCFGSVIQYMENLT
                     GADKDKELLSNYFKLVSKNFNDMADSQSNKIKILKQRIAKEMNISFEQLDKIVSPYEA
                     IYTIADHSRTLLFAISDGSLPSNVGGGYNLRILLRRILSIIERFAWDIKIEELMDLHI
                     RYLKNMYPELEEYQKEVHTILKLESERYSSTRDRMNDIANDIKRTQKQLTVEELITLY
                     ESDGITPDFLKEVKVITEIPSNFYVKLAELHSYTQKSNTMDPLKGFDEQLPPTKLLYY
                     EDPLIRDFSAKVVKIINGNYVILDKTAFYPRGGGQEPDNGFISKSKVLEVVKHRDLVL
                     HRLEKLSSIKEGLIVNCRIDSKRRDSITKHHTATHILNSSSRSNLGSWVWQNSAFKDV
                     NYGRLDITHHSALTKEQVERIENTANDIVMKNLDVNIKEYERGESEQKFSFRIYQGGV
                     VPSNYVRIVNISNFDIEACGGTHVSKTGEIGLIKILKSERIQDGVVRLEFVAGQSAID
                     FIKNQDRNISLITHTLGSSKERLTESFQRYFYESEKLKTKLKVIMRKIAPVLAQNVSD
                     NGKQISDQGVKLYSTFDDELDEEYHIVIGEKSIELDPLLLYISLISKENGIRVIVFVG
                     AEARRYGYHAGKIAKDFSIRLGGSGGGDSKFGQGGGKFKDKIDEIINLAEIYVNTTEI
                     G"
     gene            6914..10018
                     /gene="leuS"
                     /locus_tag="VLA74_05505"
     CDS             6914..10018
                     /gene="leuS"
                     /locus_tag="VLA74_05505"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HSF50201.1"
                     /translation="MNFNESESKLEWNQIETKWKSKWNEQKLFETDPDDNKIKKYFIT
                     VAFPYPNSPQHIGHGRTYTLADVHARYMRMKGNNVLFPMAFHYTGTPILAMSKRVISG
                     DKDLIQTFKNIYNVPEEIIKTFSDPEKIARYFHNEIKLGMQDMGFSIDWRREFTTIDK
                     LYSKFITWQFKILQKKGLIVQGSHPVGWCPKDNNPVSQHDTVGDVEPEFNEYILIKFR
                     LLNSEIFLPVVTLRPETIFGVTNLWINPDIDYIEIEIDQEKWIVTREAKKKLEFLNHN
                     IKILNVVSGKNLIGKNVISPICEKNIQIFPANFVLSDTGTGIVMSVPGHAPFDYQAIK
                     DLKKDPHIYTKELNLNEIQPIKIIQLKTTHTEDDNKNRSENENKGSISSPTVSVETVI
                     SKYGINSQMDLALEKATNDLYSIEYYKGIMSPNTGIYSGMDVKDAKEKIKILLFTNNQ
                     AEIFYEFVNQPITCRCGSKCVVKLLNDQWFINYGDTEWKNKVHNYIDSMSIIPEELRQ
                     EFHNVVDWLKERACARKSGLGTKLPWDREWIIESLSDSVVYMAYYTISKFVNNENHSL
                     NQYIDEIDESFFDFILFGVGDISDFERRCKIDKSLLEKLRKEFIYFYPVDCRHSGRDL
                     VPNHLSFFIFNHVAIFDKKYWPKQMVINGSVLMEGKKMSKSLGNIIPIRTVIQNYGAD
                     TIRLSILISAELLQDADFSFDTAKSIRSKLYDLYNQALDSSYKSSVDKTFIQKLQEFQ
                     SSIRNDEFEDFLYSYLEEKENFLELEDKWMINKLQRLIHNVTESMEALRVREALHHLL
                     YVFDQDIQWYKKWSLSKGRKENHYVNIIFLLSMSLRIKMLSPFAPFISEEIWEKFGNK
                     KSINLSKWPIVHKEKINPLVEESEEFIKNLIDDINKIIKVTKKIPSTVYIYCSSIKKQ
                     IIYNQILASITIENQTNFGNIMKNLINNPETSEAKHDPSLVKKIIEDILSASAESRSN
                     RLQIKVLDESFIIEDGKELISTEITKNNPVKIIVYSENDPQRFDPKQRSKFSRPYKPA
                     IYLD"
     gene            complement(10022..10255)
                     /locus_tag="VLA74_05510"
     CDS             complement(10022..10255)
                     /locus_tag="VLA74_05510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50202.1"
                     /translation="MREIDILALLKNKIEMSGSARAGIGILIMGALLLGIGYYQERGP
                     LSLYGLIMTISGFSLYMISSIYTSIKNKRYGSK"
     gene            10294..11319
                     /locus_tag="VLA74_05515"
     CDS             10294..11319
                     /locus_tag="VLA74_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSF50203.1"
                     /translation="MKIAVVGIGVAGAYLMNQFNDTHDIQITGFERMKEEEHDAVCAW
                     ATCKNVMVNYAKKCGLNFDDYILHDGKNMRVDLNEDTHVDIGLRGMISYDKLKLIQDM
                     VKGSEIHFGKAPKKEVLESEFDLIIDSTGFHRNYLPRLDYEMWIPCVQYKVKYENNSL
                     PFDDFYLKGFPSMSGYFWYFPLGNGYAHIGAGDFTRKNHNLFLEQFLKQYKCHIIKKN
                     GRPVRISPPSNSEPFNDGIKTIGVGESIGTVYPLLGEGIIPSTICADLFIENYNDFES
                     YRKKVLKYFSIYSLVFKFIMMKIKGTFSLVKNSYDLLRIYNHMKNNEDRYGMKIKIID
                     MMKVSKV"
     gene            11410..11856
                     /gene="pfdA"
                     /locus_tag="VLA74_05520"
     CDS             11410..11856
                     /gene="pfdA"
                     /locus_tag="VLA74_05520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit alpha"
                     /protein_id="HSF50204.1"
                     /translation="MMSEDPNSQRIAIEQRINELAQHSRTLELYLNEIIGREVTVTKL
                     IEEARLASYALQNIPAGQENEALMPIGIGVFIKANVQSLDTLLVNVGAGVTLEKTRAD
                     TLNYIESRMKEFEIALNQLTNQKRQITTQLEQIQIQVNSMLHQTSS"
     gene            11908..13467
                     /gene="ftsY"
                     /locus_tag="VLA74_05525"
     CDS             11908..13467
                     /gene="ftsY"
                     /locus_tag="VLA74_05525"
                     /inference="COORDINATES: protein motif:HMM:TIGR00064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HSF50205.1"
                     /translation="MFDKLKKAFSNAISDIGKKEITKKDLENTLFDLEIALLESDVAQ
                     EVIADISNSLKEKLLGLTLEKGQTAEEIIELNLKRAIYDILSKSGSLDLVKIIKTKKE
                     RQEGPYIVVFLGINGTGKTTTVAKIANLLRKNDISVVLAASDTHRAGAIEQLHEHAKR
                     LSLKMIHQRYGADPSAVARDAVEYGKKHRVDAILIDTAGRMQTAKNLMDEISKIVQVV
                     KPDLKIFIGDSLAGNDAIFQATEFYSYTKFDGAILTKTDADSKGGSIISISYLTSKPI
                     MYLGIGQNYDDIIPFDLDQFIESLFSSTLSAETKKTTINTNSSDHDIRKELSDQKPTK
                     TLDKEIYSEEIVKNITYSSNSKNDLSIDKSSYTSRSEGFVTEQQTHNHQIQNNEEITG
                     KKTEKENNIYKISDSVKNESYDKNLGEISEKEFSKTIKEYDKKTDQLEEKKNKKKSFL
                     SIFGKRKSTSSEIPKVQRNNETTEVKSILGKNDDFGKDDKDKKNDKKNENTEDDVVYL
                     TDDDLDEILKE"
     gene            13448..14389
                     /gene="argF"
                     /locus_tag="VLA74_05530"
     CDS             13448..14389
                     /gene="argF"
                     /locus_tag="VLA74_05530"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HSF50206.1"
                     /translation="MKYLRNKNILSLQDLDLNEINILLDVAADLKKEFRSGKSRSLLK
                     GKILGMIFQKPSTRTRVSFETGMLQLGGHAIFLSSNDIHLAKGETIEDTAKTLSLYLD
                     CIMARVYDHSDIEKLSIFSIVPVINGLSDLFHPCQILADLLTIREHKTKLKGLSLAWI
                     GDGFNICNDLLLGCAKTGINMTAACPKGYEPLNWIVKLSKEEGKKTGSQISVVNDPIN
                     AVKDADIVVTDTFVSLGKDDEKIEREQIFLPKYQVNSELLRYAKNDVIFMHCLPAKRG
                     QEVTSEIIDGKSSVVWDEAENRIHVQKALLCMLMKAF"
     gene            complement(14692..15423)
                     /locus_tag="VLA74_05535"
     CDS             complement(14692..15423)
                     /locus_tag="VLA74_05535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HSF50207.1"
                     /translation="MGKRPLVRRRGRGGKQFRAIKVGKIAAAKYPNFKLDEKHSGTVV
                     DIVHERGRDAPLAKVKFDNDIMSFIPAAEGTAVGSIIQTGDGTPATSRNILSLESIPD
                     GTIICNIERNAGDGGKLIKAAGSSAVVFSHSTEGVKVKLPSGKFMTINQKCRAMIGTI
                     AGAGRTDKPFLKAGNKAKYMKAHGKLYPKVRGIAQAAVYHPHGGGRHQHIGRQSSVSR
                     NTPPGRKVGIIAPRKTGRGRLKDRK"
     gene            15643..>15804
                     /locus_tag="VLA74_05540"
     CDS             15643..>15804
                     /locus_tag="VLA74_05540"
                     /inference="COORDINATES: protein motif:HMM:NF014419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50208.1"
                     /translation="MSKNTLSLKVLEAYTRDVGRGIARIDYDTMDSLAVSTGDVVEIR
                     GKRRTTAKCL"
BASE COUNT         5648 a         2397 c         2555 g         5204 t
ORIGIN      
        1 tcctctaatt gaattcttct aattcttgtc tttttgttat ttccataaaa tacaatacca
       61 ttttttccaa tactagtatc ggtttcattg gaatcatatt gtgtgatctg aaaatttttt
      121 ggtagatcag gataaaagta atttttcctt gaaaacatag ttatttctgg tactttacaa
      181 tttagggctt tcgaggtcat gatggcatgt tctattgcct ttttattcaa aataggcaga
      241 cttcctggta aacctataca gactggacat atattttcgt tgatgtcttt tcctcgatag
      301 tttgaatagc acgaacaaaa taatttacta ttcaattctg ttagctggca gtgtatctca
      361 agaccaattt taactggaag gaccattata gatctggata tgaattaata ttaatagatt
      421 tttcaaataa ttcacctgag ttaaataatt tttcttcctc caactcatct gccattattt
      481 gaattcctat tggaagacca tctttgaatc cagcaggaat agatacagcg ggaatgccag
      541 acaaattggc taaaaccgta tttacatcta tcagatacat catcaatgga tcatctatct
      601 tttctccaat tttaaaagga agaacaggta cagttgaaga tattaataaa tcatatttct
      661 tgaacaattg ctttaattct gtctttatca tagacctagc tttctgggct ttaaggtaat
      721 attttccgta gtatccagaa gacaatacat atgtaccaac tattattcta cgtttaacct
      781 catttccaaa atttcctctt acttttgaaa aataaacatt ccattcatat tcctcaggat
      841 ctaattcaaa accatatcgt atgttatcat atcttgcaag gttactgcta gcttcggctg
      901 tggctatagt ataatatgag gcaagtgcat attctgtaga tttcaatgaa gtctcttcac
      961 actcaaaatc taaattgtta aaaacatcca atgaagaata aatacacttg gaaacatcta
     1021 tatcagctcc atcaattaat tcttttatta atcctatttt tatcttctta ttattgtagg
     1081 atttattatt tactgcatta tgattatata tgttattgtc taaagtagta ttatcattaa
     1141 agtcttttcc agaaatggta gaaaatattt ctctaacatc tgaaacattt ttaccaatag
     1201 gaccaatttg ttccaaactg ttagaatatg aaataaggcc gtatctacta accaagccgt
     1261 atgtaggttt caatcctacg acagaacaaa aactggatgg acatcgtatc gatcccccgg
     1321 tgtctgaacc tagtgataca gtacacaatt gtgctgcaac acttgctgca cttcctccag
     1381 aagatcctcc acaaacatac cctgtgttcc atggatttcg tgttaaacca aaaaaactcc
     1441 attctgtagt tgatcccata gcaaattcat ctaagtttac ctttcctata attattgcat
     1501 ccttgtctag aagttttttt accacggtgg cattatatgg gggaacatat tctgataaca
     1561 tttttgaggc acaggtagtc tttagattta ttgtacttat attatcttta attcctatgc
     1621 ctattccagc tagagatcca acaggatctc ccctttttat ctttttatca atctcttttg
     1681 cttggtttat tgcactctta ttaagtgtta taaatgcatt aatttttttg tctatctttt
     1741 ctattctatc cagtaacgaa gaaatatatt cctcagcagt aaaacaccca tttctaatac
     1801 cttctactac accctgaaca tctaatttcg gcagatttga catactaatt catctgtgga
     1861 cctctgacga atttgtcttt tttatttttt atgaccttct gtatatctct atcaaattca
     1921 ttaactttat cctctcttag atctgaaatt ttctttatca ttgaatatga ctccatttca
     1981 tttaaagata tttcatctaa tttatccaaa tatccaacaa tcttttcaat ctgttttaaa
     2041 tatgtttcat actcttcttc agatagttct attttggaaa gtttactgag atgcttaagt
     2101 tcgtcttttg tgatcatatt ctaaagctcc tttccattaa ggagataatc tatcaatatc
     2161 tcttggatat aatatagtat ctcttatatt atctacctta gtaatcgtca ttaataatct
     2221 ttcaagacct ataccacatc ctgcatgagg aggtactcca taatcaaaaa tacgcaaatg
     2281 ataatcaaaa gaattcaaat tgaggccttt ttttttcatc ctgtttacaa gaacatcttt
     2341 attactaatt cttgtacttc cagaagatat ttctaaagaa ccatacatta gatcaaatga
     2401 ctcgcaaatt ttaggatctg atatcttttc tttaacataa aatggtttcg tagatgacgg
     2461 ccaatccact ataaagtaaa atccatttaa cttctcatct tcaagtttgt taatgagctg
     2521 tggtgagata tcatctcccc acctaatcct ctcaccagat tctcttattc tttctatcat
     2581 atctgaatat ttgtatctgg ggaaagattc agtaccagta ttatcgatca ttacattgtt
     2641 gataatattt gaatctaatt caagttcggc aatttctttc gggttatttt cctttaatga
     2701 ctttattaca tatttgataa atttctctaa cattatcata atatcattat aatccacaaa
     2761 agctttttcg atgtctatag aagtagcttc agataagtgt ctatttgtac gagatggttc
     2821 tgccctaaag ataggaccta tttcaaaaac attctcaaaa gataatgtca attgttcttt
     2881 gtatatctga ggactctgtg ccataaatgc ttctctgtca tagtaaaata ttggaaataa
     2941 tgctgtacct ccttcagatg ctgtggcaat aatctttgga gtgttaactt ctataaatct
     3001 ttcattagct aaaaattctc tagtaaattt taggacagaa tctcgaataa taaaaatatt
     3061 ctgtagatgt tttctcctga gatcaatagc tctaaagtct aatcttgtat ctataccagc
     3121 tggatcctta tgttgaatca taaatggagg cgctttaata ggaatggaaa atattttaag
     3181 ctcaagcggc attatctcta caccgtttgg agcctttttc tgtgatatta cctttccacg
     3241 aatagccata gaagtatgtt cccttatttt ggatatttga taatatatgt cgtctgaaca
     3301 ttgtcctttt ttagctataa cttgcaaatc tccttccttg tctcttaaca atataaattg
     3361 aatatttcca tgatctctaa cacttgaaac ccatcccatc aaagtaacaa tttttccctc
     3421 aaaagaagga tcaatgtcag aagaatattg attttttctc cattttccca attcttcttc
     3481 ttttaacatg tcatccaatt tcaaaaccta gatatcctat aagatttata caacactaat
     3541 ttaattttta tacagtgctt tacgtagtta tcaaagaatt taattataca gttcataaat
     3601 tcactagcca aataaattta aagtcgtcca aaattataag taaaaaacta tctttaatca
     3661 cacactattt ttaaaattat attttttatt agtatagttc aaatatcctt attcatattt
     3721 ttcagattat gggaaacaat gagaatctac ttcatgtaga taaggattct tgggaagcag
     3781 aagtgataaa ttcccaatta cctgtttttg ttgatttttg ggcagaatgg tgtggtccat
     3841 gtagaatggt cggtccagca gtagaacaac tttcaaaaat tctagatgga aaagttaaaa
     3901 ttgcaaaggt caacgttgat gaaaatcaag agattgctgt aaaatacggt atccattcca
     3961 tcccttcgct attgttattt aaaaatggaa atgagattgc aagaacggta ggtgcggcgc
     4021 ctaaagaagc ttatcaaaaa tttattgaag aatcgcttgc aaagaactag caaccaattt
     4081 ttttaattca tttcttaatt ttttttaaaa tatttttcaa aaaggcatta atatagacta
     4141 ttatatccgt agcattagtt gggcaagaaa gaaatatcta ctctattttc atccgaccct
     4201 gataaatatt atagggtttc attatttgat acagtaggat tcaaacgtca taagtgtata
     4261 aattgtggaa aattcttctg gtctatctta gataaagaag tatgtccaga tcatgaaaaa
     4321 tatgatttta ttggaaattc tcctactact aaaaggtttg attatgtgaa tgcttggaag
     4381 gaggtagaaa aatatttccg atcagaaaaa cactccatag tcagaagata tccagtagtt
     4441 tgtagatggc gtgaagatct ctattttacg atcgcgtcaa tcgtagattt tcaaagaata
     4501 attggcgata aagttatttt tgaattacca tcaaatcctt tagttgtccc ccaaatgtgt
     4561 ttgcgattca atgacgttga aaatgttggg gtaagtggaa gacattatac tagtttttgt
     4621 atgataggtc aaacatgtaa tgcgaatact cctggaggtt attggaaaga tagatgcatt
     4681 gaattagatt ttaatctact tacaaaagtt ttgggaataa atcaaaacga gataactttt
     4741 gtagaggatg tctggatggg agctggagct tttggatatt ctctagaata ttttgttcgc
     4801 ggtttagaac ttggaaacgc tgtattcact gaatttgaag gagatgaaaa caattacaga
     4861 ataatgaaga acaaaattat tgacatgggt gcaggactag aaagattttc gtggataact
     4921 atgggaacgc caacaagcta tgattgttgt ttcggatctg ttattcaata tatggaaaat
     4981 cttacgggag cggataaaga taaagaatta ctctcaaatt acttcaagtt agtctcaaag
     5041 aactttaatg atatggctga ttctcaatcc aataagatca aaattctaaa acaaaggatt
     5101 gccaaagaaa tgaatatttc attcgaacag ctcgataaaa ttgtttcccc atatgaggca
     5161 atttatacta tagctgatca cagtagaaca cttctatttg ctatttctga tggttctcta
     5221 ccatcaaatg taggaggtgg ctataattta agaattctct tgcgaagaat cctttcaata
     5281 attgaaagat ttgcgtggga tataaaaatt gaagaattaa tggatttaca tataagatac
     5341 ctaaaaaata tgtatcctga attagaagaa tatcaaaagg aagtacatac aattctcaag
     5401 ttggaatcag aaagatatag tagtactaga gaccgcatga atgatattgc taatgatata
     5461 aaaaggacac aaaaacaact tactgtagaa gaacttataa ccttgtatga atctgatggt
     5521 attacaccag attttctaaa ggaagttaaa gtcataacgg aaataccgtc caatttttat
     5581 gtcaaattag cggagcttca cagttatact caaaaatcaa atactatgga ccctttaaag
     5641 gggtttgatg aacaattacc tccaacaaag ctgctatatt atgaagatcc tcttataaga
     5701 gatttttcag ccaaagtggt taaaattatt aacggaaact atgtaatatt ggataaaaca
     5761 gcattttatc ctaggggagg gggtcaagaa ccagataacg gatttatatc taagtcaaaa
     5821 gtattagagg ttgttaaaca tagagatctt gttcttcata gattagaaaa attatcttct
     5881 attaaagaag gtttgattgt gaattgtagg atcgattcca aaagacgtga ttctatcacc
     5941 aaacatcata ctgcgactca catattaaat tcatcatcaa gatctaatct tggatcttgg
     6001 gtatggcaaa attcagcgtt taaggatgta aattatggac gacttgatat aacacatcat
     6061 tctgctctaa ctaaagagca ggtagaaagg attgaaaata ctgctaacga tatagtcatg
     6121 aaaaaccttg atgttaatat caaagaatat gaaagaggag aaagtgaaca aaaattctct
     6181 tttaggatat atcaaggagg tgttgttcca tctaactatg ttagaatagt gaatataagt
     6241 aattttgata ttgaagcttg tggaggtaca cacgttagta aaactggtga aataggatta
     6301 ataaaaatcc taaaatcaga aagaattcaa gatggtgttg taagattgga atttgtagca
     6361 ggtcaatctg caatagattt tatcaaaaac caagatcgca acatctctct tattacacac
     6421 acattaggat ctagtaaaga aagattgaca gaatcctttc agcgatattt ctatgaatct
     6481 gaaaaactaa aaacaaagct aaaagtcatt atgagaaaaa ttgccccagt acttgcacaa
     6541 aatgtatctg ataatgggaa gcaaatatca gatcagggtg taaagttata ttctactttt
     6601 gatgatgaat tagatgaaga atatcatatt gttattggtg aaaaatccat agaattggat
     6661 ccccttctgt tatatatatc tctgatatct aaagaaaatg gaatacgggt aatagtgttc
     6721 gtaggtgcag aagcaagaag atatggatat catgcgggca aaattgccaa ggatttttcc
     6781 attaggttag gaggttctgg tggaggagac tctaagtttg gacaaggagg gggcaaattt
     6841 aaagataaaa ttgatgagat aattaattta gcagaaatat atgttaacac cactgaaata
     6901 ggttgagaaa aatatgaatt ttaatgaatc tgaatcaaag ttagaatgga atcaaataga
     6961 aacaaaatgg aagtccaaat ggaatgagca aaaacttttt gaaacagatc ccgatgacaa
     7021 caaaataaaa aaatatttca ttacggttgc ttttccatat ccaaattctc ctcagcatat
     7081 aggacatggc agaacataca cactagctga tgtacatgct cgttatatga gaatgaaagg
     7141 aaacaacgtc ttgtttccaa tggcttttca ttatactggg accccgattt tggccatgtc
     7201 aaagagagtg atatctggtg ataaagatct aattcaaact tttaaaaata tttataatgt
     7261 tccagaggaa atcatcaaaa ctttttcaga tcctgaaaaa atagctaggt attttcataa
     7321 tgaaattaag ctaggaatgc aagatatggg attttccata gattggagaa gggaattcac
     7381 aactattgat aagttatatt ctaagtttat tacttggcag tttaaaatat tacaaaaaaa
     7441 aggattgatc gtccaaggat cacatcctgt agggtggtgt cctaaagata ataaccccgt
     7501 cagccaacat gatacagttg gtgatgtaga acctgaattt aatgaataca ttttgataaa
     7561 gttcagatta ttgaatagtg aaatttttct tccagttgta acattaagac cagaaacaat
     7621 ttttggggtc actaatttat ggataaatcc agatattgat tatatcgaga tagaaattga
     7681 ccaagaaaaa tggattgtaa ccagagaagc taaaaaaaag ttagaatttc ttaaccataa
     7741 tattaaaatt ttaaatgttg tgagtggaaa aaatctgatc ggtaaaaatg tcattagtcc
     7801 tatctgtgaa aagaatatcc agatctttcc cgcaaatttt gttttatctg ataccggtac
     7861 tggtatagtt atgtctgtcc cgggtcatgc tccatttgac tatcaagcaa taaaagacct
     7921 gaagaaagat ccacatatct acacaaaaga gctaaacttg aatgaaatac agccaatcaa
     7981 aattatacaa ctcaagacta ctcatactga agatgataat aaaaatcgat cagaaaacga
     8041 gaacaaaggt tcgatatcat ctcctacagt ttcagttgaa acggtgatct caaaatatgg
     8101 tataaatagt caaatggatc ttgctctaga aaaagcaaca aacgatttgt atagtattga
     8161 atattataaa ggtataatgt cacctaatac aggtatatat tcaggaatgg atgtcaaaga
     8221 tgccaaggaa aaaataaaga tattactttt tactaataac caagcagaaa tattttatga
     8281 atttgtaaat caacctatca catgcagatg cgggagtaaa tgtgttgtaa aactattgaa
     8341 tgaccaatgg ttcattaatt atggagatac agaatggaag aataaagttc acaattatat
     8401 tgattctatg agtataattc ctgaagaact aagacaggaa tttcataacg tcgttgattg
     8461 gctaaaagag cgagcatgtg caagaaaatc aggattaggt actaaacttc cttgggatcg
     8521 cgaatggata atagaaagtc tctccgattc tgtggtctat atggcatatt atactatctc
     8581 gaagtttgtt aataatgaaa accattcatt aaatcaatat attgatgaaa tagatgaatc
     8641 attctttgat tttattttat ttggtgtagg agacatcagt gattttgaaa gacgatgtaa
     8701 aatcgataaa tcgttactag aaaaactacg aaaagaattt atctattttt atcccgtcga
     8761 ttgtagacat tcaggacgtg atttagtacc taatcatcta tcttttttta tttttaatca
     8821 tgtagctata tttgacaaga aatattggcc aaagcaaatg gtgataaatg gttctgtact
     8881 tatggaaggt aaaaaaatgt ccaagtcatt aggaaatata ataccaatta gaacagtcat
     8941 acaaaactac ggagcagaca caataagatt atctatcctt atttcagctg aacttcttca
     9001 agacgccgat ttctcatttg atacagcgaa atccattcgg tctaagctgt atgacctata
     9061 taatcaagct cttgattcat cctacaaaag ctctgtagat aaaacattta ttcagaaatt
     9121 acaggaattt caatcatcta tcaggaatga tgaatttgaa gattttttat attcttatct
     9181 tgaagaaaaa gaaaattttc ttgaattaga agataaatgg atgataaata agttacagag
     9241 gttaattcat aatgttactg aatctatgga agctttaaga gtgagagaag cattacatca
     9301 tttgttgtat gtttttgatc aggatattca atggtataaa aaatggtcac tttcaaaagg
     9361 aagaaaggaa aaccattatg tcaatattat ttttttactt tctatgtctt taagaataaa
     9421 aatgctttct ccattcgctc cttttatttc agaggaaatt tgggaaaaat ttggtaataa
     9481 gaaatctatt aatttatcaa agtggccaat agttcataaa gaaaaaatta atcctcttgt
     9541 ggaagaatca gaagaattta tcaagaatct gatagatgat attaacaaaa taatcaaggt
     9601 aaccaaaaag atcccaagta ctgtttatat ttattgttct tcaattaaga aacaaataat
     9661 atacaatcaa attctagcat ctataacaat agaaaaccaa acaaattttg gaaatatcat
     9721 gaaaaatctt attaataatc ctgaaacttc tgaagctaaa catgatcctt ctttagtaaa
     9781 gaagataatt gaagatattc tatcagcatc tgcggagtcg cgaagcaata gattacaaat
     9841 aaaggtatta gatgaatctt ttattattga ggatggtaag gagttaatat ctacagaaat
     9901 aacaaaaaac aatcctgtca agattattgt ttattcagag aacgatccgc aaagatttga
     9961 tccaaaacaa cgatcaaaat tttcaagacc gtacaaaccc gcaatctatt tggactgaaa
    10021 tctatttaga tccatatctt ttatttttta ttgatgtgta tatggatgat atcatataca
    10081 gactaaatcc acttatggtc attattaatc catacagaga aagaggtcct ctctcttgat
    10141 aataccctat cccaagaagt aatgcaccca ttattaagat tccaattcca gctcttgcag
    10201 aacccgacat ctcgatttta tttttcaata gtgctagaat atcgatttct ctcaatatat
    10261 ttttattttt gatttattct agattgtatg ttaatgaaaa ttgctgtggt tggtatagga
    10321 gttgccggag cctatctaat gaatcaattt aatgatacac atgacattca aattactgga
    10381 tttgaacgaa tgaaagaaga agaacatgat gcagtttgtg catgggcgac atgtaagaat
    10441 gtcatggtaa attatgcaaa aaaatgtggt cttaattttg atgattatat tctacatgat
    10501 ggaaaaaata tgagggtaga cctgaatgaa gacactcatg ttgatatagg tttaagagga
    10561 atgatcagtt acgataaatt aaaacttata caagatatgg taaaaggaag tgaaatccat
    10621 ttcggtaaag ctccaaaaaa agaagtatta gaatctgaat ttgatctgat aattgattcg
    10681 actggttttc acagaaatta tcttccaagg ttagattatg agatgtggat cccctgtgtt
    10741 caatataaag tgaagtatga aaataatagt ctcccttttg atgattttta tcttaaaggc
    10801 tttccttcaa tgtcaggtta tttctggtat tttcctttag gaaatggcta tgctcatata
    10861 ggagcaggag attttaccag gaaaaaccat aacctctttt tggaacaatt tctcaaacaa
    10921 tacaaatgtc atattattaa gaaaaatggg agaccagtta gaataagtcc tccttcaaac
    10981 tcagaacctt tcaatgatgg tataaagaca attggagttg gagaatcaat aggaaccgta
    11041 tatccattgc ttggagaagg gataatccca tctacaatat gcgcagatct ttttatagaa
    11101 aactacaacg atttcgaatc atatcgtaaa aaagttttga aatatttcag tatttattct
    11161 ctggttttca aatttattat gatgaagata aaaggaactt ttagtctcgt aaagaattct
    11221 tacgatttgc tacgtattta taatcatatg aaaaataacg aggatcgtta tggaatgaaa
    11281 atcaaaataa tagatatgat gaaagtctca aaagtatgat tatttgttag tattttcaaa
    11341 ataattttat attatttctc ttttatatat tttcgtcaca gttataagtg gattcaaaat
    11401 agtttaataa tgatgagcga agaccccaac tcccaaagaa tagctattga acagcgtata
    11461 aacgaactag ctcaacattc taggactttg gaactatatc ttaacgagat aattggaagg
    11521 gaagttacgg ttacaaaatt aattgaagaa gctcgtcttg catcttatgc tcttcaaaat
    11581 attccagccg gacaagaaaa tgaagccttg atgccaattg gaattggtgt ctttataaaa
    11641 gccaatgttc agtctctaga caccttacta gtcaatgttg gtgcaggcgt tactttagaa
    11701 aaaacacgag cagatacatt aaattatata gaatctagaa tgaaagaatt cgagatagca
    11761 ctaaatcaat taacaaatca aaaaagacag ataactacac aacttgaaca aattcaaatt
    11821 caggtaaact ccatgttgca tcaaacatcc tcctaaataa aagtaaatat ttaaaaaaat
    11881 atagtaattt gaataagctg atccaaaatg tttgataaat taaaaaaagc attttccaat
    11941 gctatttcgg atataggtaa aaaagaaata acaaaaaagg atcttgaaaa tactttattt
    12001 gacctagaaa ttgcattatt agaaagtgac gttgctcagg aagtcatcgc tgatatttct
    12061 aatagcctta aggagaaatt attaggattg actttagaaa agggtcaaac tgcagaagaa
    12121 atcattgagt taaatcttaa gagagctatt tatgacattc tttccaaatc aggaagtctc
    12181 gatctagtaa agattattaa aacaaaaaaa gaaagacaag aaggtcctta tattgtagtg
    12241 tttttaggca ttaatggaac aggaaaaaca acaacagttg caaaaattgc aaatcttctt
    12301 cgcaaaaacg atatttctgt tgttttagct gctagtgata ctcatagagc gggagcaata
    12361 gaacaattac atgaacatgc caaaagacta tcattaaaaa tgatacatca acgctatggt
    12421 gcagatcctt cagctgttgc aagggatgca gttgaatatg gaaaaaaaca tagagttgat
    12481 gcaatattga tagatacagc aggccgaatg caaactgcaa agaatcttat ggatgagatt
    12541 agtaaaattg tgcaagttgt caagccagat ttaaaaatat ttataggcga ttccctcgca
    12601 ggaaatgacg ctatttttca agcaacagaa ttctattctt atacaaaatt tgatggagct
    12661 atattaacaa agactgatgc agattcaaaa ggagggtcaa taatctcaat ttcatattta
    12721 acatctaaac ctattatgta tctaggtata ggtcagaatt atgatgatat aattcctttc
    12781 gatcttgatc aatttatcga atcattattt agttccacac tttctgcaga aaccaaaaaa
    12841 actactataa atacaaattc tagtgatcat gatataagaa aagagttatc ggatcaaaaa
    12901 ccaacaaaaa ctttagacaa ggagatttat tcagaagaaa ttgttaaaaa tattacatat
    12961 agttctaatt caaaaaatga tttatctatt gataaatctt catatacatc tagatctgaa
    13021 ggatttgtta ccgaacaaca aacacacaac catcaaattc aaaacaatga ggaaataact
    13081 ggtaaaaaaa cagagaaaga aaataatatc tataaaattt ctgattctgt taagaatgag
    13141 tcgtatgaca agaatttagg cgaaatatct gaaaaagaat tttccaaaac tataaaggaa
    13201 tatgataaaa aaaccgatca gcttgaagaa aagaagaata aaaagaaaag ttttttatct
    13261 atatttggaa aacgtaagtc tacaagttct gaaattccta aagtacaacg taacaacgaa
    13321 acaactgaag tcaaatccat cttaggaaaa aatgatgatt ttggtaagga tgacaaagat
    13381 aaaaaaaatg ataagaaaaa cgaaaacaca gaagatgatg tggtatacct tacagatgac
    13441 gatttagatg aaatacttaa ggaataaaaa tatacttagt ttacaggatc tggatttaaa
    13501 cgagatcaat atactattag atgttgcagc agatcttaaa aaagaattca gatcagggaa
    13561 atccagatca ttactaaaag gaaaaatact gggaatgatt tttcaaaaac cttctactcg
    13621 tacaagagtg agttttgaga caggtatgtt acaacttggt ggtcatgcaa tatttttgag
    13681 ttcaaatgat atacatttgg caaaaggaga aactatagaa gatactgcaa aaactttgtc
    13741 cttgtatttg gattgcatta tggcacgagt atatgatcac agtgatattg aaaaattatc
    13801 aattttttca atcgttccag ttataaatgg tctgtcagat ctttttcacc cttgccaaat
    13861 acttgcagat cttttaacta taagagaaca taaaactaaa ttaaaaggct taagtcttgc
    13921 gtggatagga gatggtttca atatttgtaa cgatcttctt ttaggttgtg ccaaaaccgg
    13981 tataaatatg acggcagcct gtccaaaagg atacgaacca ttaaattgga tagtaaaact
    14041 ttcaaaagaa gaaggaaaaa aaaccggatc tcaaatttcg gtcgtaaatg atccaattaa
    14101 tgcagtgaag gatgctgata ttgttgtaac agatactttt gtttcacttg gaaaggatga
    14161 tgaaaaaatc gaaagagaac aaatttttct tccaaaatat caagtaaatt cagagctttt
    14221 aaggtacgca aaaaatgatg ttatttttat gcattgttta cctgcaaaaa gaggtcaaga
    14281 ggtcacctcg gaaataatag atggaaaatc atctgttgtt tgggatgaag ctgaaaatcg
    14341 gatacatgta caaaaagcat tattgtgtat gttaatgaaa gctttttaaa ttatattaat
    14401 tttttttgtc aattgaatac aattaaagat gggattcatt tggagagctg tgcatttaac
    14461 tatctcaaat ttatagaaaa ataaaattta gttaaacggt ctaatgtata aattcaacta
    14521 aagatgaatc ttatatgtat gacaagcttt aacatattag gatctacatt ttgaattttt
    14581 ttaattttaa tctacgaaaa atagatttga tattgcaaaa ataattacta aaagtttgtt
    14641 tgtaaaaaat cataaaccaa aattattttt cattaaaaaa gaaaagaatg gtcatttacg
    14701 gtcctttaat cggccgcgcc ctgttttcct tggagctatg attcccactt ttctacctgg
    14761 tggtgtattt ctgctgacag aggattgacg acctatatgt tgatgtcttc cacctccgtg
    14821 aggatgataa actgctgctt gagcaattcc cctgactttt ggatataatt taccatgtgc
    14881 cttcatgtat tttgctttgt ttccagcttt taggaaaggc ttatccgttc ttcctgcacc
    14941 agctatagtt cctatcatag cacgacactt ttgattaatc gtcatgaatt ttcctgaagg
    15001 taattttact ttcacacctt cagtcgaatg tgaaaataca acagccgaag aaccagcagc
    15061 cttaattaat tttcctccat cccctgcatt cctttctata ttgcaaatta tggtcccatc
    15121 tgggatagat tctaacgata aaatatttct tgaagttgcc ggagtaccat ctccagtttg
    15181 tataatacta cctacagctg taccttcagc tgctggaata aaagacatta tatcattatc
    15241 aaattttacc ttagctaagg gagcgtctct tcctctttcg tgaactatat caactacagt
    15301 accagagtgt ttttcatcta atttaaaatt tggatattta gctgcagcaa tctttcctac
    15361 cttaattgct ctaaattgtt tgcctcctcg ccctcttcta cgtactagtg gtcgttttcc
    15421 caaagttaat ctaaaagaat cgatctattt aggtgatttt aacttttgtg ttttaaaaaa
    15481 ttaaaacgat aaatgatatt ttgataatgt ctatatcaag taatattcaa ttttttttat
    15541 attatattaa ataaaaaata tcttataaat ttctatttta tatattatta tgaaaccaac
    15601 caaagattat tatgtgattt taattgataa aatttaagtg tattgagtaa gaatactctt
    15661 tcccttaaag tactagaggc atacacacgt gatgtaggtc gcggaattgc tcgaattgat
    15721 tatgatacta tggattcttt agctgtttct actggtgatg ttgtagaaat cagaggaaag
    15781 cgaagaacca ctgcaaaatg ttta
//
LOCUS       DATIAS010000281         2556 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_594354, whole genome shotgun sequence.
ACCESSION   DATIAS010000281 DATIAS010000000
VERSION     DATIAS010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594354"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VLA74_05545"
     CDS             <1..315
                     /locus_tag="VLA74_05545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50209.1"
                     /translation="NSTVFDASFEMIKPDGTAKHTHTLTDYILTDVSNPNNNSTIFNG
                     TATISMMEAPITEVPVAIQVMNDNIGVISIDPKKTDNHFGTDAVYGIPLEESEYKEKK
                     SQ"
     gene            500..1399
                     /locus_tag="VLA74_05550"
     CDS             500..1399
                     /locus_tag="VLA74_05550"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSF50210.1"
                     /translation="MTYQSSFAATEYEHKMKWGEKGVAIGQFNQAGAIAADSENNIYV
                     ADFTGRSNMIQKFTDNGTFILGFGVLGNGPQYFTNPAGIAVDSENNIYVSDFGNPNYA
                     IKKFSNDGKFINSFGSFGLGDGEFISPGGLGVDKENNIYATDFGENNNIQKFDQNGNF
                     IMKFGTYGSGDGRFLNPTDVETDSLGNIFVADSFNNRVQKFDQNGNFIMKFGKPGTGN
                     GEFNTPIELAIDSSDNIFVVDNNNNRVQIFNRDGGYITQFGNQGTASERIQDPIGITL
                     DSSGNAYVADGTDSDIHVFSPVK"
     gene            2061..2315
                     /locus_tag="VLA74_05555"
     CDS             2061..2315
                     /locus_tag="VLA74_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50211.1"
                     /translation="MGLNHTATFPGAYFFAANRYHHHVATNTWLGENISSAINNNRLG
                     LDHYSINLHSQNEILSMKITGPTLFFSFIAILLEHIDFYI"
BASE COUNT          892 a          355 c          397 g          912 t
ORIGIN      
        1 aattcaactg tttttgatgc atcttttgaa atgataaaac ctgatggaac agcaaagcat
       61 acacatactc ttactgatta tatcttaact gatgtttcaa atccaaataa caacagcaca
      121 atatttaatg gaacagcaac aatcagtatg atggaagcac ctattactga agttcctgta
      181 gctattcaag taatgaatga taatattggt gttatatcca ttgatccaaa aaaaacagat
      241 aatcactttg gcactgatgc agtatatggc attcctttag aagaaagcga atataaagaa
      301 aagaaatccc agtgaatcta gcaaataatt tattttattt tatttatttt ttattagcaa
      361 agtaatatat cgaaataatt acaagtttat aggtatagtt aatatactat tattttgtta
      421 taactctatg aattttaaaa ataccttctt ttttagtggt atgatggctt tattgtcatt
      481 tttgattttt ttgaatagta tgacatacca atcttcattt gcagcaacag aatatgaaca
      541 caaaatgaaa tggggagaaa aaggtgttgc tattggtcaa tttaatcagg caggtgcaat
      601 tgctgctgac tctgaaaata atatttatgt tgctgatttt actggtcgtt caaatatgat
      661 tcagaaattt acagataacg gaacatttat ccttggtttt ggagtattag gtaatggccc
      721 ccaatatttt actaatcctg ctggtatagc tgttgactct gaaaataata tttatgtttc
      781 tgattttgga aatcctaatt atgctattaa gaaattcagc aatgatggaa aatttattaa
      841 ttcatttggt tcatttggtc ttggagacgg agaatttatt agccccggtg gattaggtgt
      901 agataaagaa aataatattt atgctactga tttcggagaa aataataata tacaaaaatt
      961 tgaccaaaat ggtaatttta taatgaaatt tggtacttat ggaagtggag acggccgatt
     1021 cttaaatcca acagatgtag agacggattc gcttggaaat atatttgtag cagattcttt
     1081 taacaatcgt gtacaaaaat ttgaccaaaa tggtaatttt ataatgaaat ttggtaaacc
     1141 aggtactggt aatggagaat tcaatactcc tatagaatta gcaattgatt catctgataa
     1201 tatctttgta gttgataata ataacaatcg tgtacagata ttcaatagag atggaggata
     1261 tattactcaa ttcggaaatc aaggtactgc atctgagaga attcaagatc caattggtat
     1321 cacactagat tcttctggta atgcgtatgt agctgatggg acagatagtg atatacatgt
     1381 attcagtcca gtaaaataat attcaatata ataaaatatt aatctttttt atattcaata
     1441 cgccttttaa ttatttttct ttaaatgtgc cataatactt tatataataa tgattaatcc
     1501 aaaattaaag gtagatcatg tacatcttag agtataagat ttagaaaaat cacttgaatt
     1561 ttaccagtcc atccttggat ttaaaaagta agacgagaat ctaagactgc atttcttcca
     1621 tcagataata ataactcatc tttttttggt tgcacttaaa taatgctctc aaacctcaaa
     1681 ggaaacagag agtagcagga ctaaatcact gcaacttgat taccagaaag aagatattta
     1741 tcatattttc ttaaacatat gcaaaaaaat cttaatcctg aatattatga aggtatggca
     1801 gatatgcagt atcagaatct atttacatac atgatcctga ttttaatgga attgaagtat
     1861 acagggatat agctccctca gaatggaaat ggagaggcta tacagtacat atggttactg
     1921 aaccattgga tgtacaaggt ctactgaaag attcgattga taaggataga atggaatgaa
     1981 cttcctccca aaatttccat aggtcacgtt catttgcatg tgtcttatct tgctaaagaa
     2041 aaaaattgta tcatgagatt ttgggtctaa atcatactgc tacttttcct ggtgcatatt
     2101 tctttgctgc aaataggtat catcatcatg ttgctaccaa cacatggctt ggagaaaaca
     2161 tttcttctgc aattaataat aacagactag gattagatca ttattcaata aatttacata
     2221 gccaaaatga gattttatct atgaaaataa ctggtcctac tttattcttt tcttttattg
     2281 cgatattact tgaacatatt gatttttata tttagtattt ttagcgtttt caatatatgt
     2341 gaaatattac atatgaataa tatttttgta aaaaaatttc attattattt aaaaaaaaat
     2401 ttcagcaaaa cacaaattct cattcctatt atttttttat ttctttcttt ttattatgta
     2461 acctctttct ttgacattgt tctacagaaa tcctccgctg cttttttaat ttcctctaat
     2521 gaaagatctt tcttatgggt tgctattgac cattga
//
LOCUS       DATIAS010000282         2007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1683754, whole genome shotgun sequence.
ACCESSION   DATIAS010000282 DATIAS010000000
VERSION     DATIAS010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1683754"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..347)
                     /locus_tag="VLA74_05560"
     CDS             complement(78..347)
                     /locus_tag="VLA74_05560"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSF50212.1"
                     /translation="MIIKCLLIEGNRVYGNDKYGIDRHSGTHDMIVRNNIVYNNYNAG
                     LICSADCYNILIEGNKVHDNGHGDYKREIAISKNTYNSTMRKYSI"
     gene            670..1695
                     /locus_tag="VLA74_05565"
     CDS             670..1695
                     /locus_tag="VLA74_05565"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSF50213.1"
                     /translation="MNNKPCTYSLVLSSLIIALLHPMIIIDKKIFGIFHDEYEQNKEF
                     GKHYIQKFDSNGNFVTSWGVKGTGEGDFLHPHGIDVDSQGFIYVTDEEKHEVQKFDND
                     GKFILSWGAPKDENLFSKKIEDINIDKEGNVFVVDYGKRKVLKFDNNGTLLFSFGGKG
                     EGEGQFNRPWGIDFDSDNNIYVSERNNHRIQKFDSDGNFITKWGKYGEGKGKFSHLHA
                     IAIDSKDNVYANDEDHGNIQKFTKNGKFIKSWGEVGSIEGEFKEPHGMAFDSKDNLYV
                     TDTQNHRIQVFSSDGKYIKSIGKKGSGAGEFILVHDIAIDDKDNIYVADSRDAHPNKI
                     RINQLDW"
     gene            1763..>2007
                     /locus_tag="VLA74_05570"
     CDS             1763..>2007
                     /locus_tag="VLA74_05570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50214.1"
                     /translation="MLKSFSNSLSIFIIVISLAVILAIFFYFTYSEIERSAKDVALGE
                     IQNVSLTQTHDSGKIIENVLMDIVTNLKTIANSPTVQ"
BASE COUNT          736 a          248 c          338 g          685 t
ORIGIN      
        1 ttagacaatt ggtaagtgta ttgtcatata ttttattatc atgagaatct cttacaacat
       61 gaacacatac atcttgatta tatactatat tttctcattg tagaattata tgtatttttg
      121 cttattgcta tttctctttt ataatcacca tgaccattat catgtacttt atttccttct
      181 ataagaatat tgtaacaatc agcagagcat attagtcctg cattataatt attataaaca
      241 atattattgc ggactatcat atcatgagtt ccactatgac ggtcaattcc atatttatca
      301 ttgccatata cacgatttcc ttcaattagc agacatttga ttatcaacta tatcacatta
      361 tttaacttta actctcatgt aatataaaat attcaaagtt ataattgcaa atcctgctga
      421 tgaaataata aaatttgcta ataataaaag aatagacctt attatcatgg gcactactgg
      481 attgagtgga attaaaaagt ttgtattcgg cagtgttgct agaaatgtat ctgaaaaagc
      541 aaactgtccg gtaatgttag ttcgataata tcttgacaat taatataatt tattgacttc
      601 acttcgcatt gtcattcaat cgatattatt taagtcttat aaagaattag gtcttacaaa
      661 ttgttgacca tgaataataa accttgtaca tattctctag tattgagttc cctaattata
      721 gcacttttac atcctatgat tattatagat aaaaaaattt ttggtatttt tcatgatgag
      781 tatgaacaaa ataaggaatt tggaaaacat tatattcaaa agtttgatag taatggaaat
      841 tttgttacta gttggggagt gaaaggaaca ggagagggcg actttttaca tccacatggt
      901 attgatgtag actctcaagg ttttatttat gtaactgatg aagagaagca tgaagttcaa
      961 aagtttgata atgatggaaa gtttatttta agctggggtg ctccaaaaga tgaaaattta
     1021 ttttcaaaaa agatcgaaga tataaatatt gataaagaag gaaatgtctt tgttgttgat
     1081 tatgggaaaa gaaaagtttt gaaatttgat aataacggaa cattactttt cagttttgga
     1141 ggtaaaggtg aaggagaagg tcagtttaat agaccatggg gcattgactt tgattctgat
     1201 aacaatattt atgtaagcga acgaaataat catcgtattc aaaaatttga ttcagatggc
     1261 aattttataa caaaatgggg aaagtatggt gaaggaaaag gcaaatttag tcacttacat
     1321 gcaattgcta tagattctaa agataatgta tatgcaaatg atgaagatca tggcaatatt
     1381 caaaaattca ccaagaatgg aaaatttatt aaaagttggg gtgaagttgg aagcatagaa
     1441 ggtgagttta aggaaccaca tggaatggca tttgattcaa aagataattt gtacgtaaca
     1501 gatacacaaa atcatcgaat tcaagtattt agctcagatg gcaaatatat taaaagtata
     1561 ggaaagaaag gctcaggagc tggagaattt attcttgtac atgatattgc gattgatgat
     1621 aaagataaca tatacgttgc tgatagccgt gatgcacatc ccaataaaat aagaataaat
     1681 caattggatt ggtaaataaa agagtattag ctgcatgtgt gataaaagaa actttgagct
     1741 ttgatattga attcttaaat atatgctaaa atcatttagt aactcccttt caatctttat
     1801 tatagttata tctttagctg ttatattggc aattttcttt tattttacat attcagaaat
     1861 agaaagatca gcaaaagatg tggcattagg cgaaatccaa aatgtttcat tgactcaaac
     1921 tcatgattct ggaaaaatta tagaaaatgt tctcatggat atagtgacaa atcttaaaac
     1981 tattgcaaat tcaccaactg tgcagca
//
LOCUS       DATIAS010000283         2896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1957401, whole genome shotgun sequence.
ACCESSION   DATIAS010000283 DATIAS010000000
VERSION     DATIAS010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957401"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VLA74_05575"
     CDS             <1..449
                     /locus_tag="VLA74_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50215.1"
                     /translation="RLSSIISMYNKNKQYKFFDVEYVDNIISRKKIYLPKIDYEHKLF
                     VYGVNFLNSIEQEVGFNCGKIFRMEDLTSDTKYLKSLIEEISSGVLSADDELLAKMIK
                     TSPTNKRTSKEKIEFKDWEIDVIKKVVDDKAWKLYSELGYDRPDFL"
     gene            703..1653
                     /locus_tag="VLA74_05580"
     CDS             703..1653
                     /locus_tag="VLA74_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50216.1"
                     /translation="MIDIASALWNHRNKIVNSKERLYKLYQTVNRSSDLSFPQWIQLY
                     AIVLEFSPDLIIELGRGYGNSTCVFTEAVANSKMGKVVSIGYDAEHAWENTTLPRLKQ
                     HLSPNWLDNLHVINENIMKINFKEIVGQSERVLLFWDAHGKELAQYILAHLLPLIYKR
                     EHLIIIHDMTDVRHSGKAPTYRKDEPLISMHNIVSSFEEIIPIFDFLSRNGIHYDTPG
                     ESITRFLKESDQISSSRSKELKNIWRELVGESVAIDNSHMLYFDINNNTSQSELFFPN
                     CDSIPVQSIGKSFISAQQGKSLSSRAIQLLSRLKITKNQK"
     gene            complement(1836..2540)
                     /locus_tag="VLA74_05585"
     CDS             complement(1836..2540)
                     /locus_tag="VLA74_05585"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSF50217.1"
                     /translation="MKKNPFEIQKNIFEKAKKNAHIIFDIGAYIGNITDRYEVLFTNA
                     EFYCFEPIPSTFNSLKSRFLTKKNIHCFNVACGESQKEVNIWEMKNVATSSLYKPSFY
                     LMHSENKNIVSDLSIINSHKIPQITLDQFCCEKEIPGIDILKMDVQGNELNVLKGASS
                     LLDNGKIGLVYTEILFSNLYEGQCYYHDIATYLQGKKYELFDFTFLKNGEDGKLYFGD
                     AIFLGPEILTNYSMYV"
     gene            2714..>2896
                     /locus_tag="VLA74_05590"
     CDS             2714..>2896
                     /locus_tag="VLA74_05590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50218.1"
                     /translation="MSGYANNKRLIQDKNQLTYNKDDSKSINQLPFSIVLPVKSEYQL
                     LQNCLKSCYAVNPDEVI"
BASE COUNT         1039 a          458 c          433 g          966 t
ORIGIN      
        1 caagattaag ttctataatt tctatgtata ataaaaataa gcagtacaaa tttttcgacg
       61 ttgaatatgt agataacata atttctagaa aaaaaatata cttgccaaag atcgattatg
      121 aacataaatt atttgtttat ggtgtaaatt ttctaaatag tattgaacaa gaagtaggtt
      181 tcaattgcgg aaaaatattt agaatggaag atctaacttc agataccaag tatttgaaat
      241 cattaataga agaaatttcg agtggagtac tttcagctga tgatgagtta ttagctaaaa
      301 tgataaaaac ctctcctaca aataaacgca cttctaagga aaaaattgaa tttaaagact
      361 gggaaattga tgtaattaaa aaggttgtag atgacaaggc ttggaaatta tactcagaat
      421 taggatatga taggccagat tttctctgat attttacatt gctttatcgg ccaatcaaaa
      481 tccaaacatt tgatgtaatt tttctacaac aacattttgg aaagatttca gattacggca
      541 aactgtctga tgttattgaa aaatacaaac agttcgcaga aaacaaatga tgaatcatat
      601 atacgatatt aattcaccac tcatttttta ctctgtacat agagatttag tataaagttg
      661 atttgtatga tattaataat agcattaaga catagatttt aattgattga tatagcctca
      721 gcgttgtgga atcataggaa taaaattgtt aattctaaag aacgcctcta caaactctac
      781 caaactgtaa accgttcaag cgacctttca tttcctcaat ggatacagct ttatgctatt
      841 gtactagaat tctccccaga tctcatcata gaattaggtc gtggatatgg aaattctact
      901 tgtgtgttta ctgaggctgt agctaatagt aagatgggaa aggtagtaag cattgggtat
      961 gacgctgagc atgcttggga aaatacaact cttcctcgct tgaaacaaca ccttagtcca
     1021 aattggttag acaatcttca cgtaattaac gaaaacataa tgaaaataaa ttttaaagaa
     1081 atagtaggac aatctgaacg agtcttacta ttttgggatg cacatggtaa agaattagct
     1141 cagtatattc tagctcacct tttaccgctt atctacaaac gagaacatct aatcataata
     1201 catgacatga cagacgtcag acattccgga aaagctccaa catatcggaa agatgaaccg
     1261 ttaatttcaa tgcacaatat tgtaagttct ttcgaagaga taattccaat ctttgatttt
     1321 ctctctcgca atggtattca ttatgataca ccgggtgaat ctataacacg gttcctcaag
     1381 gaaagtgatc agatatcctc cagtcgttcc aaagaactga agaatatttg gcgtgaattg
     1441 gttggtgagt ctgtagctat tgataatagt cacatgctct attttgatat aaacaacaac
     1501 acgtcacaaa gtgaattatt ctttcctaac tgtgattcta tccctgtaca gtctatagga
     1561 aaatccttta tttctgctca gcaaggaaag agtttgtcat caagagcaat ccaattattg
     1621 agtcgactta agataacaaa aaatcagaaa tgacacttta gcatgaacat atttcccatt
     1681 atgaatttta gaccgttatt tccactaatt cagtattata acataaacgt gaagagatac
     1741 atgttagtaa acgctttaca caagatagaa atttactatc ctacagtatg gaagattcaa
     1801 aatcaattac cgtactattt ttaatttttg ttattttata catacatact ataatttgtt
     1861 aatatttcag gtcctaagaa aattgcgtca ccaaagtata atttaccatc ttcaccattt
     1921 tttaaaaatg taaaatcaaa tagctcatat ttttttcctt gaagataagt agctatgtca
     1981 tgatagtaac attgtccttc ataaagattt gagaagagta tctctgtata tacaagtcct
     2041 atcttaccat tatcaagtaa tgatgatgct ccctttaaga cattcaactc attaccctga
     2101 acatccattt tcagaatatc aattccaggg atttcttttt cacaacaaaa ttggtctaat
     2161 gttatctgag gaattttatg tgaatttatt atacttaaat cagatactat gtttttattc
     2221 tcactatgca tcagataaaa ggatggtttg tacaacgatg aagtggccac atttttcatt
     2281 tcccatatat ttacctcttt ttgagattct ccacaagcca cattaaaaca atgtatattt
     2341 ttttttgtaa gaaatctact tttcaatgaa ttaaaggtag aaggaatagg ctcaaaacag
     2401 tagaattccg cattagtgaa aagaacctca tatctatcag ttatgtttcc aatatatgcg
     2461 cctatatcaa aaataatatg agcatttttt ttagcttttt caaatatgtt tttttgaatt
     2521 tcgaaaggat tttttttcaa ttatatcaat ttgccttttt tagtcattca tattaatatg
     2581 actatcaatt acagaacaaa cacaacagtt tattcaccat tcctttttta tttaccagaa
     2641 agatattaaa ttgataagac gatatgtgct tgtcaaacat atttccaaga tatataataa
     2701 atgaggataa gaaatgagtg ggtatgcaaa taataaacgt cttatacaag acaagaacca
     2761 gctgacctac aataaggatg attcaaaatc aatcaatcaa ttacccttta gtattgtatt
     2821 accagtaaag tcagaatacc aacttttgca aaattgttta aagtcatgct atgcagtaaa
     2881 cccagacgag gttata
//
LOCUS       DATIAS010000284         4552 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_594631, whole genome shotgun sequence.
ACCESSION   DATIAS010000284 DATIAS010000000
VERSION     DATIAS010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4552
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594631"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VLA74_05595"
     CDS             <1..350
                     /locus_tag="VLA74_05595"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSF50219.1"
                     /translation="NGKQFTSKIFRHFLQRNNIKDKPIPARYPQLQGKIEAYNKIVKN
                     EFLAVENIPNIDDGKRRYSMFVKAYNEEREHGGINGYTSLEMFLMKGTRLNSCKNNKT
                     IKQIKESVTHVGK"
     gene            complement(503..658)
                     /locus_tag="VLA74_05600"
     CDS             complement(503..658)
                     /locus_tag="VLA74_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50220.1"
                     /translation="MVEPYSTFLQTISKEVADVQGNIKICHSISLVNTRNHWMILVKC
                     SSASQWL"
     gene            1581..2102
                     /locus_tag="VLA74_05605"
     CDS             1581..2102
                     /locus_tag="VLA74_05605"
                     /inference="COORDINATES: protein motif:HMM:NF013103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HSF50221.1"
                     /translation="MIDESRIKNFELHGIKTINIEKFIDERGYFSEVIRKDWTSIFKE
                     DWIKQANLSYSYPGIIRAWHRHSRGQIDYFLVLKGSVKIVAYHEDKKIQKDNRLVEIV
                     TSEQKLQLVCIPGFYWHGTKTLGNESSLTLYFVNNMYDHDNPDEERRPWNDPSIKDPK
                     TGLTYDWNNPPHK"
     gene            complement(2340..3275)
                     /gene="rfbD"
                     /locus_tag="VLA74_05610"
     CDS             complement(2340..3275)
                     /gene="rfbD"
                     /locus_tag="VLA74_05610"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HSF50222.1"
                     /translation="MKNLLVLGASGLTGNKIFNLAKNKFNTFGTFNKRFISDSTLFKI
                     DVTDENDLRSLFNSIKPDIVINTAALLNVDHCETHSFDAYQINSKAVQLIAKLCNNFG
                     SRLIHLSTDYVFDGEKGYYSEIDKPNPQSIYGKSKLKGEEAAKLSGSYSIVRTSVIYG
                     WTQIETTMTTSSSGKSINFVLWALIKMNKKEKLEIVIDQFSSPTFVDELAITILKIAT
                     IENNEIYHIAGNSCLNRYEFTKKLASIMGYSSSEINPIKDNSINQIARRPKNSCLNCT
                     KIQRDLNIKLSTVETSLLILRKQIEQAYPSLLGNL"
     gene            3571..4070
                     /locus_tag="VLA74_05615"
                     /pseudo
     CDS             3571..4070
                     /locus_tag="VLA74_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020489.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT         1674 a          618 c          734 g         1526 t
ORIGIN      
        1 acaatggtaa acagtttaca tctaaaatat tcagacattt tctacaacgt aacaacatta
       61 aagataaacc catacctgca aggtatcctc aactacaagg aaagattgag gcatataaca
      121 aaatagtaaa gaatgagttt ctagcagtag aaaatattcc caatatagat gatggaaaga
      181 gaagatattc tatgtttgtt aaagcataca atgaagaaag agaacatggt ggcataaatg
      241 gttatacttc attggaaatg tttcttatga aaggaacaag attaaatagt tgtaagaata
      301 acaaaacaat caagcagata aaagaaagtg ttacccatgt aggtaagtga atctgttacc
      361 tatctgtgca agtacaacat ctactaaact tgatggtcct gcagcagaag gtgatgaatt
      421 ctatatcaag gcatgattga aaggaagacc atatcatgat gagatactaa aatcaacagg
      481 aagaaaaccc aggaagagag ggctaaagcc attgagaggc agaggaacat tttacaagga
      541 tcatccaatg attacgtgta ttcaccagag aaatggaatg acatattttg atgttcccct
      601 gtacatcagc cacttcttta gatattgtct gtaaaaacgt agagtatggt tccaccatat
      661 ttacagatga atatatagag catatgacca gctggaagaa catggtttca tacacaaaag
      721 tgtaatccat tcgcagaaag aatatgcaaa tggtatagta catgtgaata actgtgagtg
      781 cagaagcaac ttataccaat tatggataag aaagttcatg ggtgtaaaca agtacaattt
      841 acaggtatac tccaaaacat tccagtttat tcataacaat agaaccaaga caagagaaca
      901 aagattcatg gaaattcttt tctgtaggta gctaaaacat tcagaaatat gagcggacca
      961 tatttgtatt ttgatttatg atgatagctt taggataatc tccaacctgt atatccttta
     1021 tcttgatatt attttctcca gaaattacag atgcaattca atatctagtt gaaaacaata
     1081 aaaaattagc attcataaaa caaattgttg gtggaaagat actggaaagc ctaaggattt
     1141 acttgaagct aatcaattaa ctcttgaatc tataaagact aaaatagaga ttgaaacaga
     1201 tccaacatgc gatttaattg gcaatattat aataaatgag ataccattat ttatcctaat
     1261 agtaaattaa gaggtcctat tataattggt aaaaactgca aaataggacc gaatgtatat
     1321 atcggtccat atacttctat aggtgataat acaattatag aatctggtga aattgaaagt
     1381 agtattatca tggagaatgt ttatattaat tctaaaaagc gaattgttga gtcaataatt
     1441 tcgaggaatt caaaaattga atcatcttta gacaatttac catgtggatt aaaattaatt
     1501 gtggaagaga atagctattg tagattataa caataaaata ataagaaata ttaacataga
     1561 taattgtaaa ttggcatagt gtgattgatg agtctagaat taaaaatttt gaactacatg
     1621 gaataaaaac cattaatatt gaaaaattta tagatgaacg tgggtatttt tctgaggtaa
     1681 ttcgaaaaga ctggacttca atttttaaag aagattggat aaagcaggcg aatttatcat
     1741 atagttatcc aggaattatt agagcatggc ataggcattc tagaggacaa attgactatt
     1801 ttttagttct taaaggatca gtcaaaattg tggcttatca tgaagataaa aaaatacaaa
     1861 aggacaatag attagtagaa atagtgacca gtgaacaaaa attgcagtta gtgtgcatac
     1921 cagggtttta ttggcatgga acaaagacac ttggaaatga aagttcactt actctttact
     1981 ttgtaaataa catgtatgat catgataacc ctgatgaaga aagaagacct tggaatgatc
     2041 cttctattaa ggatcctaaa acaggattaa catatgattg gaataatcct ccgcacaaat
     2101 aaatgtaaat ttgactaaat acaactgata tatcaattga gtgagatcat agttgctcta
     2161 tatctcttct ttattgataa cagttgatgt tgtataaaat agaatatatc caagtttagg
     2221 ctattttttc tttattttta ttttaaaagt attatatgtc cctttataag ttaccaaata
     2281 aatataaatc taatttattt aacatttgtt aatggttcca aaaagataac aacaattatc
     2341 tatagatttc caagcaaaga cggatatgct tgttctattt gctttcttaa aattaaaagg
     2401 gaggtttcta ctgtggatag tttgatattt agatcccttt gtattttggt acaatttaag
     2461 catgaattct ttggtcttct agctatttga tttatagagt tatcttttat cggattaatc
     2521 tctgaagatg aatatcccat aatagaagcc aatttttttg taaattcata ccgatttaga
     2581 caactattgc ctgctatatg atatatttcg ttattttcga tcgttgctat ttttagtatc
     2641 gttattgcta actcatctac aaaagtagga gaagaaaatt gatcaataac tatttcgagt
     2701 ttctcttttt tattcatttt aattaatgcc cataatacaa aattgataga tttgcctgaa
     2761 cttgatgttg tcattgtagt ctcaatttgt gtccatccat atattacact ggttcttaca
     2821 atagaatatg aaccagatag tttggcagct tcttctcctt ttagcttact cttaccatat
     2881 atactctgag gatttggctt atctatttca gagtaatatc ccttttctcc atcaaaaaca
     2941 taatctgttg ataaatgaat taatctggaa ccaaaattat tacataattt ggctattaat
     3001 tgcacagcct tagaattaat ctgatatgca tcaaaagaat gagtttcgca atgatctaca
     3061 ttaagtaaag cagcagtgtt tatgactatg tcaggtttaa tactattaaa taaacttctt
     3121 aaatcattct catcagttac gtcaattttg aataaggtgg aatcagaaat aaatcgttta
     3181 ttaaaagtcc caaatgtatt aaatttattc tttgctaggt taaaaatctt gttaccagtt
     3241 aatccactgg ctcctaaaac tagtaaattc ttcatatcta gagtatctta gatttgaata
     3301 tttagaaact tatctaatgt attatatttt aatttgagta taaatcataa ttaattttat
     3361 cattgagata taacaatgca tttaaataat atattatctt ggccttgttg ctcttctgtg
     3421 tatatttata ttttgcaatt aaaatattta gtatagcaaa tattgataga tctttgttat
     3481 gtatatctct aaagaacaaa tgactttgat taataattga agcattctaa ttttataatt
     3541 atagtagtaa ctggtcccac tttatagaag ggttcaaatc ccacagacag aagaagtaaa
     3601 tcaggtacaa aacgcagtct cttggtagat ggtcagggca ttcctcttgg aatcactgta
     3661 ggtagtacta acagacatga tatgaagatg acaaaagcaa cacttcagag tatagtgata
     3721 catagaccat tgtcatcatc atcactaaaa ttacaacaac aacatatctg tcttgacaag
     3781 gcttatgact atcctgaagt atacgagtta cttgaggaat atggttatac tatgcatatt
     3841 tgcaagagag gaagagaaga atacaataat ggtaacaaaa agaagagaag agaagaagaa
     3901 ggataccaaa atatagagca agaagatggg tagttgagag aacacactca tggatgaata
     3961 gattcaggcg attattgatt agatgggaaa agaaggaaga taactatatt gcaatattat
     4021 attttgtctg tgcttggata acatataaga gaggaggtgt tttcggatag gctctaagtt
     4081 aattcatcta tttttggttc gaattttaat ctggttttat gtctgtttat tgtattaatt
     4141 gcaacttcat gattttcttc tatagtaaga aggaggtttt atccttctct atcttgttca
     4201 tttaatataa tgcgattttg atcagttatt cctacccatc ttatagacct gtcagaattc
     4261 aatacacttt gggtaaaaac ctaaaggaat ttcgtagttt caatcttctc attatcatca
     4321 tttccagaca tattcttttt ataaagtaat tttcgattgt aataaaaaag ttattttagt
     4381 ataaaactaa catcataaaa aataaaattt aattgtattc tacgtattat ttataccatc
     4441 gtaattatat tttctataca tctccagagg agactgtatt caatatattc tctataaaat
     4501 gtaaaacttt gaatatattt ccaaataaga ttatactgat atggtttcac cg
//
LOCUS       DATIAS010000285         2535 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1275648, whole genome shotgun sequence.
ACCESSION   DATIAS010000285 DATIAS010000000
VERSION     DATIAS010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275648"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1616
                     /gene="pheT"
                     /locus_tag="VLA74_05620"
     CDS             <1..1616
                     /gene="pheT"
                     /locus_tag="VLA74_05620"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSF50223.1"
                     /translation="PDYLLQQILEQLPFLGLDIESIDENIVRVEYNPNRPDFSSDIGI
                     FRALNGLVGQELGIPKFRYSTDPQYRIIVENSVKKIRPIIFFFIAKNKKLTPDSLEQI
                     ISMQEDLHNGIARGRKKASIGIHDLDKMEFPLRYSAVTPDIEFVPLDQSEKYDFNEIL
                     NKLTVGQKYKHLVESFTKYPVVFDKNNMIVSFPPIINSDATKITNQSKNLLLEITATH
                     SEIALDILSILSHYFLDEGFEIVSGSVNENNSGSFFPLKKLCNKSMVVKKDYINNLLG
                     LKLSSNEIIKSLKKVRLDASKIKGSDIKCVMPHYRSDITNTIDVVEEVALGYGIYNLE
                     PSMPSFKIVSGIKNPLMEFINELRKTIIGFGLLEVVNFSLVDQKSNNTIKPKPINHLS
                     LKVNESKSSEHEFLRTSIIPSLMNNLSHNIHEEYPQKIFEIGKVFRINKEIAEKWCLG
                     VVMSSNNIGFTETRSLLRSIVKINFGEEICTKSYENEFFITGRSANIYIKDSLIGVIG
                     EVSPKVISEFNIRVPVSAFEIVLSDFLKL"
BASE COUNT          902 a          338 c          416 g          879 t
ORIGIN      
        1 ttcctgatta tttattacaa caaatactag aacaacttcc atttttgggg cttgatatag
       61 aaagtattga tgaaaatatc gtgagagttg aatataatcc taacagaccc gatttttcaa
      121 gtgatattgg aatttttaga gcgttaaacg gtttggtagg tcaagaactt ggtataccaa
      181 aattcagata ttcaaccgat ccacagtata gaattattgt agagaattca gttaaaaaga
      241 taagaccaat catctttttt tttattgcaa agaacaaaaa acttactcca gattcacttg
      301 aacaaattat ttccatgcaa gaagatctgc ataatggtat cgcaagggga agaaagaagg
      361 caagtatagg aattcacgat ctagataaga tggaatttcc tttgagatat tctgctgtga
      421 ctcctgatat agaatttgtt ccgcttgatc agtctgaaaa atatgatttt aacgaaatat
      481 tgaataaatt gacagtagga caaaaataca agcatctagt tgaatcattt acaaaatatc
      541 ctgttgtttt cgataaaaat aatatgattg tatcttttcc accaataata aatagtgatg
      601 ccacgaagat tacaaatcaa agtaaaaacc tattattaga aattactgct acacattctg
      661 aaattgcatt agatatcttg tctattctat ctcattattt tttggatgaa gggtttgaga
      721 ttgtgtctgg atcagtaaac gaaaataata gcggtagttt ctttccttta aagaaactat
      781 gcaataaatc tatggttgtt aaaaaagact acataaataa tcttttaggg ttaaaacttt
      841 catctaatga aataataaaa tcattaaaaa aggttagact agatgcatcg aaaatcaaag
      901 gtagtgatat aaagtgtgtt atgcctcatt atagaagtga tattactaat actatagatg
      961 ttgtagaaga agtggctttg ggttatggta tttataattt ggaaccaagt atgccttcat
     1021 ttaaaattgt ctctggaata aagaatcctc ttatggaatt tattaatgaa ttaagaaaaa
     1081 ctatcattgg atttggttta cttgaagttg taaattttag tttagtcgat caaaagagta
     1141 ataatacgat aaaaccaaag ccaataaatc acctttcatt gaaagttaat gaaagtaaaa
     1201 gttctgaaca tgaattttta agaacgagta ttataccctc acttatgaat aacttgtcac
     1261 acaatattca tgaagaatac ccacaaaaaa tattcgagat aggaaaagtg tttagaatca
     1321 ataaggaaat agcagaaaaa tggtgtcttg gtgttgttat gtcctccaac aatatcggtt
     1381 ttaccgaaac tagatctttg ttaagatcta ttgtcaagat taattttgga gaggaaatat
     1441 gtacaaaatc atatgagaat gaatttttta ttactggaag atctgcaaat atttacataa
     1501 aagatagtct cataggagtt attggagaag tttctccaaa ggtaataagt gaatttaata
     1561 tcagagtacc tgtatcagca tttgaaattg ttctaagcga ttttttaaaa ctttaaatta
     1621 caagatcctt gcaccggaaa cttatcgctt aattgggtga ccgataatga ttatactacc
     1681 taacaataat tcatagacct aaaaagatag tttgtgacgt gtgcgtataa gatttcgttg
     1741 tataatacaa actagctgat cttttaggga ttcaggtgta ggttaatagt tacaaagtat
     1801 attgtacttg tcctgtcgcc agtattcttc ttgataatat aatcgagatt gttgccgatg
     1861 gaaataatca cgaaatcgct caagagatgt atattgagat aacctgaaat accggctagt
     1921 actttccaca tttttgatct aggtgttttg catatctgtc acattccttt tgatgggcgc
     1981 aaaggtgcca aaaatacaag attcttttat gatgggtttt agtcgttttc agtgatatgg
     2041 atgtatcaga aataatgtaa aggcttttaa taattattat ttacatttgt ttcaactgtt
     2101 taagaaattt acaatgcaat tgttatttct ttttttataa aaggaaaaaa tattttccac
     2161 agaataattt ccaatatctt tcataattat tttatactcc taatgacaac ctttaatggc
     2221 ttttaagcat atgtttgaat taggaagaaa ttacaataat tcttatgttc gttgatacgt
     2281 cttaaaggca accccgttta aaaaacgcta ggaggattac accaagtgtg taaggctatc
     2341 tatgaatagt tgtgagtcag aggcggggta caatcatgat gtgttcatat ttatctaatt
     2401 aactatctca tcctgctttc ataaatcaat tttatattat ttatttttag aataattaga
     2461 agtccaatct ttaaaaaaaa gctttcttca accttttatt attattgtgt tagatctatg
     2521 atactcttct taatt
//
LOCUS       DATIAS010000286         3336 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_868337, whole genome shotgun sequence.
ACCESSION   DATIAS010000286 DATIAS010000000
VERSION     DATIAS010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868337"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..398
                     /locus_tag="VLA74_05625"
     CDS             267..398
                     /locus_tag="VLA74_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50224.1"
                     /translation="MIQYSFTLNNGEQALSIPSPSLPRKMVGHIEYDTTSGCANWQC"
     gene            615..944
                     /locus_tag="VLA74_05630"
     CDS             615..944
                     /locus_tag="VLA74_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH1187 family thiamine-binding protein"
                     /protein_id="HSF50225.1"
                     /translation="MNDKMLITAEISIIPIRLNNKTTGMSKEIAAVYDAIKEIDDIKI
                     TLTGMGTQIETRNLERILKIIEISHKTLREIGVKRIISSIRIDERLDKSQTLNNKITS
                     VKQKLKK"
     gene            complement(1053..2360)
                     /locus_tag="VLA74_05635"
     CDS             complement(1053..2360)
                     /locus_tag="VLA74_05635"
                     /inference="COORDINATES: protein motif:HMM:NF040322.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50226.1"
                     /translation="MEEKKIKIAFWNVANLFDIEKNEIATDFEFTPEKGWTKEVRDIK
                     VENLSKIIKSMKYNEESESDDYGPDLLGLCEVENKNILDKLIEKIDPDKYAIAQYNDS
                     PDLRGINTCLVYSKDKFDCLDTNAYNIDFRYPTRNIFQAHLKVKENDSDLYVLVNHWP
                     SRRGKYEACQPNDTAQARNTVAEKCGKIVDTLLKVPTDEVYKMPHIFNKDHIMKLDYE
                     LNKNILLMGDFNDDPYDESVTRYLNAVFDIRYCKEWKQIFELRAREEKSSVDVSFRKY
                     YLEEPVCLYNPMMKLVADPYSVGNTDIDPNVPGGTIYYWKTKRWSLFDQFIISQGLYR
                     GKQKLKFRTNSIKIFYQGLRLVDNLSYDKFNDSINEYYYLDKTKIHPSLKDNPTEFVF
                     QKKYYNDNTKQYEIDKNFPRGRENNSGYSDHFPIMCILDVLDN"
     gene            2572..3195
                     /locus_tag="VLA74_05640"
     CDS             2572..3195
                     /locus_tag="VLA74_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50227.1"
                     /translation="MSIIDKLILRPVPDAEELYKNSRAKEELPEILKILSLWGKNTTN
                     LWRLHIILGITATIFSILAAIGFSSTGIIPDNLDDTNNSTEIINAAQKEIKQLHDQKV
                     ASQIFGFLAAVSISLMTAFNLGAKSNDTRNAWRELNAAVLKFNQNIIGKREVISSYEH
                     AETLIGGLTFTKNGISLPGTSPSGTSPSGTSPSGTSPSGTSPSGTSQ"
BASE COUNT         1160 a          505 c          489 g         1182 t
ORIGIN      
        1 atggatttga tatcatttcg tggaatcttg ataaaaagaa tagatgcaga aattgttcta
       61 accctatctc gataattggt aaacctaaaa aaataggaat gagaaataga ttccaaatta
      121 ttaattaatt agggttgaat aacattttga tcagtactaa catattagaa ttagacaaga
      181 agataattaa ttcaatatta tctcctaatt ttacatagaa ttacatggat tttcaacagg
      241 aattttttat tatatttgaa tctagcatga tacaatattc ttttacctta aataatggtg
      301 aacaagcttt atcaattcca tctccatcac ttccaagaaa gatggtcggt catatcgaat
      361 atgatactac atccggttgt gctaactggc agtgttaata taaggaaata gaaatagctg
      421 tgaatgcatc attctaacat acatgttgtt gaagtctggc aaaagtaaag cattgatctg
      481 tattatgata atatttgtat tcgtatttca ttggcataac tctacaaaac acgtcgaatg
      541 tattaaaaac ttgatttatt ccagtaatta ctaaatattg gtataaatat tcatagtaac
      601 atattattta tcaattgaat gacaaaatgc taattactgc agaaattagt ataatcccaa
      661 tacgcctgaa taataaaaca acaggtatga gtaaagaaat tgcagctgta tatgatgcta
      721 taaaggaaat agacgatatt aaaattactc ttactggtat gggtactcaa atcgaaacaa
      781 gaaatttaga aagaattcta aagattatag agatatccca taaaacactc agagaaatag
      841 gtgtcaaacg aataatttca tcaataagga tagatgagag attagacaag tctcagacct
      901 taaataataa aataacgtcg gtaaaacaaa agcttaaaaa ataaaagaga ataattgacc
      961 agagatttta tttttttatt ttttattttt attctttata acgaataaca gaattcatag
     1021 aagctatctt ttctcctttg acattttgta ttttaattat ccagtacatc caatatacac
     1081 ataatgggaa aatggtcact ataacccgaa ttgttttctc ttcctcgagg aaaattctta
     1141 tcaatttcat attgtttggt attatcatta tagtattttt tttgaaatac aaattctgtg
     1201 ggattgtctt tcaatgatgg atgaattttt gtcttatcta gataatagta ttcgttaata
     1261 ctgtcattaa atttatcata cgaaagatta tctacaagtc ttaaaccttg gtaaaatatt
     1321 ttaatactgt tagttctaaa ttttaatttc tgttttccgc gataaagtcc ctgagagata
     1381 ataaattggt caaacaggct ccatcgtttt gttttccaat agtatatggt gccaccagga
     1441 acgtttggat cgatatctgt atttcctact gaatacgggt cagccaccaa tttcatcatt
     1501 ggattgtata agcaaacagg ttcttctagg tagtattttc tgaatgatac atccacagaa
     1561 cttttttctt ctctagccct taattcaaat atttgtttcc attccttaca atatctaatg
     1621 tcgaaaacgg catttaaata tctggttaca ctttcgtcat aaggatcatc attgaaatct
     1681 cccattaaca gaatattttt gtttaattcg tagtcaagtt tcattatatg gtctttgtta
     1741 aatatatgcg gcattttata tacttcgtcg gtaggaactt tcagtaatgt atcaactatt
     1801 tttccacatt tctcggctac agtatttcta gcctgagctg tatcatttgg ttggcatgct
     1861 tcatattttc ctcttctcga aggccaatga tttaccagaa catacaaatc agaatcgttt
     1921 tctttgacct tgagatgtgc ctggaatatg ttcctagtgg gatatctgaa atcaatatta
     1981 tatgcattag tgtctaaaca atcgaattta tctttagaat acaccaaaca agtgtttatt
     2041 cctcgtagat ccggactatc attatattgc gctattgcat atttatcagg atctattttc
     2101 tctattaatt tatcaagtat gtttttattt tctacttcgc ataaacctag caaatctggc
     2161 ccataatcat cactttcact ctcttcgtta tacttcatag atttaataat tttagatagg
     2221 ttttccacct tgatatcgcg cacttccttg gtccatccct tttcaggagt aaactcaaaa
     2281 tcagtcgcta tttcattttt ttctatatca aagaggtttg ctacattcca gaaagcgatt
     2341 ttaatttttt tttcttccat cacacgtgca atttgttttc ttttttaata atgtttttga
     2401 tatcattcac tcttcttctt taccgataga ttaaatgata gattaaagtt atcggatttt
     2461 gaaaaactaa ttgataaaat tatgataaat tgtatctatt aatttagaaa taagcattat
     2521 gtgaaaaaaa tgatcgatag tattataagc gtcatttaat taatagatta aatgtctata
     2581 atagataaac tgattttaag accagtacct gatgctgaag aactttataa aaatagtcgt
     2641 gcaaaagagg aattaccaga aatattaaaa attttatcat tatggggaaa aaatacaaca
     2701 aatttatgga gattacatat tatacttggt ataacagcta caattttttc aatacttgct
     2761 gccattggat tcagttctac tggcattatt ccagataatt tagatgatac aaataattca
     2821 accgagataa tcaatgctgc gcaaaaagaa ataaagcaat tacatgatca aaaagtggca
     2881 agtcagattt tcggttttct agctgcagtg agtatttctt taatgactgc ctttaatttg
     2941 ggagcgaaat caaatgatac aagaaatgca tggagagaat tgaacgctgc agtattgaaa
     3001 tttaatcaaa atatcattgg aaaacgcgaa gtaataagtt catatgagca tgcagaaaca
     3061 ttaatcggag gattaacctt tacaaaaaat ggaattagtt tacccggaac aagtccatct
     3121 ggaacaagtc catctggaac aagtccatct ggaacaagtc catctggaac aagtccatct
     3181 ggaacaagtc aataataaat cccttgctag attgcgaatt ttatcacaga tatgtcatta
     3241 ttcaatgtgt aacatagact attgcaatat tatttgacca aaatatatat attcatttaa
     3301 tttggttata aaataatggt ttcagaattt aatgat
//
LOCUS       DATIAS010000287         2189 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1004225, whole genome shotgun sequence.
ACCESSION   DATIAS010000287 DATIAS010000000
VERSION     DATIAS010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004225"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..728
                     /locus_tag="VLA74_05645"
     CDS             231..728
                     /locus_tag="VLA74_05645"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HSF50228.1"
                     /translation="MNFPTNNNKSQDQKEENKKKENIVDFAAILTGKEEVPEVDTLDT
                     ALATFQSTGNSNKDDEKDDIKYSVKVTDTDKIKEVDIHTGKPNEKGDVVAELYKSDTP
                     SGEVIGNLTEGKIRSKDLKGPLQGKNTRELVRKIEKGEAYVDVKTEDKPKGKVRGKIK
                     KLTST"
     gene            728..1408
                     /locus_tag="VLA74_05650"
     CDS             728..1408
                     /locus_tag="VLA74_05650"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSF50229.1"
                     /translation="MTKLHKYYIFDITIAIVFLIVGGIITAPTFSKYFDNSITSQKLA
                     AEFLEKDDVNITNINAERDELKEKVKLEAIDLSNKNLSGVDLRSLIVLNSKIFNSILS
                     DLHLENFQFSGNLSNTNMINSYFTSVDLNKFNLTKANLATANLYNTNLTDADLTPADL
                     TNANLTFTDLKEAILLDTNLTNADVNHAKFNGTFFNCASLKTTNITDLTIQNIILLDS
                     NFNKVRSC"
     gene            complement(1719..2039)
                     /locus_tag="VLA74_05655"
     CDS             complement(1719..2039)
                     /locus_tag="VLA74_05655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50230.1"
                     /translation="MAYVSDDPNLTEKRYNTVYRKGDITGESADNVTTDIKKAAKLAT
                     LLEGISFPTNKERIKDHLNRLSPSMGNRINDVLEAIQNNLDDNVEYNSTYEIEKAAKL
                     VKQQ"
BASE COUNT          843 a          302 c          306 g          738 t
ORIGIN      
        1 actttaacca ttctttcaga aaagattttt aatcgaataa aaatataaag gctatttgaa
       61 gtgacagcca aaacctttag aggatcaaaa agttaggaaa tcaaatcgct actagaatgc
      121 caaactaatt gcaattcaca ttaatttaca taatagccta tttttcttat taagcgtata
      181 taagaaaatg atgtaactat tataagaaat atatctaatt tgtaattaca ttgaattttc
      241 ctaccaacaa taataaaagt caggatcaga aggaggaaaa taagaagaaa gaaaatatag
      301 tagattttgc tgcaatactg actggaaaag aggaagtacc agaggtagat acattggata
      361 ctgctttagc aacatttcaa tctactggta atagcaataa agatgatgaa aaagatgata
      421 taaaatactc tgttaaagtt acagatacag ataaaataaa agaagttgat attcatacag
      481 gaaaacctaa tgaaaaagga gatgtagttg cagaattgta taaatctgat actccatcag
      541 gagaagttat aggtaatcta actgagggaa aaataagatc aaaagatcta aaaggtccac
      601 tacaaggaaa gaataccagg gaactagtca gaaaaataga gaaaggagaa gcctatgtag
      661 atgtaaaaac agaggataag ccaaagggaa aagtaagagg aaaaattaaa aaattaacat
      721 ctacttgatg actaaacttc acaaatatta tatttttgat ataacaatag caattgtttt
      781 cttaatagtt ggtggtatta ttacagcacc aacttttagc aaatatttcg ataatagtat
      841 aacttctcaa aaattagcag cagaattttt agagaaagat gatgtaaata taactaatat
      901 taatgctgag agagatgagt taaaagaaaa agttaaactt gaagcaattg atctctcaaa
      961 taagaatctc tctggtgtag acttaagatc gttaatcgtg ttaaactcaa aaatatttaa
     1021 ttcaatttta tcggatttac atttagaaaa ctttcaattt tctggcaact tatcaaatac
     1081 aaatatgatc aattcatact ttacaagtgt agatttaaat aagtttaatc tcactaaagc
     1141 aaatctagca actgcaaatt tatataatac aaatctaaca gatgctgatc tcacccctgc
     1201 agatcttaca aatgcaaatc ttacttttac agatttgaaa gaggctattc ttctagatac
     1261 aaatctaaca aacgctgatg tgaatcatgc aaaatttaat ggaacattct tcaattgtgc
     1321 aagtctgaaa acgactaata ttacagattt aacaattcaa aatattatac tacttgattc
     1381 aaattttaat aaggttagaa gttgttagac taaacttatg ctataaatcc ttattttttt
     1441 cttttaactt aaatttaaat taagttctaa ttagtttcat cattttcgta ttaaatacat
     1501 ttaaaaaatt agtattgttc cgatatacta tgaataatgt tcaagtcctc agtagagaca
     1561 tcacatttga ctaattcaga ggtttgacgg tcatttttgc ctgtaatcca ttcatctaat
     1621 caagttaata gttctatatt ttattttggc caataagttt aagaaatttt aatcacatat
     1681 aactagattt gtcattatca ataacagttt atttttttct attgttgttt aaccaactta
     1741 gccgcttttt ctatttcata ggtactatta tattcaacat tgtcatctaa gttattctga
     1801 attgcttcca agacatcatt aatcctattt cccattgaag gagagagtct gtttagatga
     1861 tcttttatcc tttccttatt tgttggaaag gagattcctt caagtagggt agccaactta
     1921 gccgcttttt ttatatctgt agtaacatta tctgcagatt caccagtaat atcgcctttc
     1981 ctataaacag tgttatacct tttttctgtt aagtttggat catcagaaac atatgccata
     2041 tctaattaaa cttaattatt acttcaaagt aaataatgat ttctatatta caatgggtat
     2101 aaacagtttt gtaaatgatt aggaattaat tcaatcgata aatataccag ttttattttt
     2161 taaattgaaa tatcacttaa aatatcctc
//
LOCUS       DATIAS010000288         2314 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1684757, whole genome shotgun sequence.
ACCESSION   DATIAS010000288 DATIAS010000000
VERSION     DATIAS010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1684757"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VLA74_05660"
     CDS             <1..578
                     /locus_tag="VLA74_05660"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HSF50231.1"
                     /translation="EPHIDARTMEIHHTKHHQTYTDKLNAALDKCSTDIQEKDIVEIL
                     SNLDQVPADQKSAINFNGGGFDNHRIFWHNMKSNGGGEPSGPIADAINTSFGSFAAFK
                     EKFSSTTALIQGSGWGWLVYNPSTNKVEYKSMPNQTSPRTEGLIPLLGCDVWEHAYYL
                     KYQNRRPDYISVWWNVINWEDVSQRFNKISK"
     gene            complement(624..1193)
                     /locus_tag="VLA74_05665"
     CDS             complement(624..1193)
                     /locus_tag="VLA74_05665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50232.1"
                     /translation="MNLLFLSLLLLQSILLFIFNFTEISAQTLLKNSTDFKVYQNKNY
                     SFELMYPLDWTYIEFEDQFFDMDLNVVTSFISPLYSPIDTFQEYFTIKTKMLDSTDTF
                     SNHFKLYLEKLKKSIANINISKVEDISDKNKYLKYSFSPQSGLVINKDEYIFLNNDNN
                     IFHLEFNSNNNDKTFDSIINKIVSYFRTI"
     gene            complement(1297..1605)
                     /gene="rpsJ"
                     /locus_tag="VLA74_05670"
     CDS             complement(1297..1605)
                     /gene="rpsJ"
                     /locus_tag="VLA74_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HSF50233.1"
                     /translation="MPQEARIKLTSTNLSTLEGVCSEIKGIGEKSGINLKGPYPLPTK
                     KMKVVTRKSPCGQGTNTWDKYELRIHRRVIDLGADDKAIRQLMRLRIPDDVYIEVSLT
                     "
     gene            complement(1621..>2314)
                     /locus_tag="VLA74_05675"
     CDS             complement(1621..>2314)
                     /locus_tag="VLA74_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HSF50234.1"
                     /translation="ENMGWYKGVTLLEALDSFDPPEKPIGKPLRIPIQDVYSITGVGT
                     VPVGRVETGVVKANDKVIVMPAGVTGEVKSIETHHTQMDSAEAGDNIGFNLRGIDKKS
                     IHRGDVIGHVDKPPNVAKEFEAQIIVIHHPTAMAPGYTPVLHAHTAQVAATLSDFVAK
                     IDPKTGGVLEEKPKFLKTGDAAIVRIRPVRPLAIETFKEFPEIGRFALRDMGTTIAAG
                     VIKSITETYQKK"
BASE COUNT          770 a          359 c          350 g          835 t
ORIGIN      
        1 tagaaccaca cattgatgca agaactatgg aaatacatca cactaaacat catcaaactt
       61 atacagataa actgaatgca gcacttgata aatgttctac tgatattcaa gaaaaagaca
      121 ttgtggaaat attatctaat cttgatcaag ttccggctga tcaaaaaagt gccatcaact
      181 ttaatggagg aggatttgat aaccatcgaa tattttggca caacatgaaa tcaaatggag
      241 gaggcgaacc aagcggacct attgctgatg caatcaatac atcatttgga agttttgcag
      301 catttaagga aaaattctct tctactactg cattgattca aggtagtggt tggggatggc
      361 ttgtatataa cccatcaacc aataaagtag aatacaaatc aatgccaaat caaacaagtc
      421 cacgaacaga aggtttaata ccactcttag gatgcgatgt atgggaacat gcctattatc
      481 tcaaatatca gaacagaaga cctgactaca tttctgtctg gtggaatgtt ataaactggg
      541 aagacgtttc gcaacgtttc aataaaattt ccaaataaaa atttttttat cttttcaatc
      601 tttttgtgta tgattaattt gaattagatt gtacgaaaat atgaaactat tttattaatt
      661 attgaatcaa atgttttatc gttattgtta gaattaaatt caagatgaaa aatattatta
      721 tcattattta gaaagatata ttcatctttg tttataacta atcctgattg tggagaaaat
      781 gaatatttca gatatttgtt tttatcggaa atatcttcta cttttgatat gttgatatta
      841 gcaatagatt tttttagctt ttctaaatat aatttaaagt gattagaaaa agtgtctgtt
      901 gaatctagca tttttgtttt tatagtaaaa tattcttgaa atgtatctat aggagaatat
      961 aatggagaaa taaaactagt tactacattt aaatccatat caaaaaattg atcttcaaat
     1021 tctatatatg tccaatctaa tggatacatt aattcaaaag aataattttt attttgatat
     1081 actttaaaat cagttgaatt ttttaataat gtttgggcag aaatttcagt aaaattaaag
     1141 ataaataata aaattgattg taataataat aatgacaaaa ataataagtt cattttattt
     1201 ttttttggta tgtattgata ttatatatat tattaaaata atagaataaa aaaatttttg
     1261 tacaaatata gttattaaat aataaaatgg aaaaaattag gtaagagata cttcgatata
     1321 aacatcatca gggatcctta atctcataag ctgtctaata gctttatcat ctgctcctaa
     1381 atcaattact cttctatgaa tccttaattc gtatttatcc catgtatttg taccttgtcc
     1441 acatggagac ttccttgtta ctactttcat tttttttgta ggtagcggat aaggaccttt
     1501 taaatttata ccgctttttt cacctattcc tttgatttca gaacaaacac cttctaatgt
     1561 ggaaagattg gtgctggtta gttttattct agcttcctga ggcattatta gatttcactt
     1621 ctacttcttt tgatatgttt ctgtaatgga tttaataact ccagcagcaa ttgtagtacc
     1681 catatctctt aaggcaaatc tgccaatttc tggaaattct ttgaaagttt ctatggcaag
     1741 aggtctaacg ggtctgattc tcacaatggc tgcatcgccg gttttaagga attttggttt
     1801 ttcttccagt actcctcctg ttttgggatc aattttagca acaaaatctg acaaagttgc
     1861 cgctacttga gctgtatgtg catgtaatac tggagtatat ccaggtgcca tagcagttgg
     1921 atgatggatc actattattt gagcttcaaa ttctttagca acatttggag gtttatctac
     1981 atgtcctata acgtcacccc tatgaataga ttttttgtct attcctctta ggttaaatcc
     2041 aatattatca ccagcttctg ctgaatccat ctgagtatga tgagtttcta tagatttgac
     2101 ttctccggtt actcctgcag gcatcacaat taccttatca ttagctttaa caacaccagt
     2161 ttctactctg cctactggaa cagtcccgac acctgtaatt gaatatacat cttgaattgg
     2221 aattctcaaa ggttttccaa ttggtttttc tggtggatca aaagaatcta gtgcttctaa
     2281 caaagttaca cctttatacc aacccatgtt ttca
//
LOCUS       DATIAS010000289         2106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1004569, whole genome shotgun sequence.
ACCESSION   DATIAS010000289 DATIAS010000000
VERSION     DATIAS010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004569"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VLA74_05680"
     CDS             <1..269
                     /locus_tag="VLA74_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50235.1"
                     /translation="GYVATELKLIGEYTLDYSMFHQRGYIFVAYGIQKKDQQTLGVME
                     KIEVNSLSLDRIKQLLREGKILNAASIVALYKAIEYHEERINKN"
     gene            complement(295..534)
                     /locus_tag="VLA74_05685"
     CDS             complement(295..534)
                     /locus_tag="VLA74_05685"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSF50236.1"
                     /translation="MEKLDSITEVRGLGLMIRVEFKSAKERDRIIIKLFKVGLLVLAA
                     EHKTIRILPPLIISKEEINLGLEMIIKVDKEGTNK"
     gene            complement(632..994)
                     /locus_tag="VLA74_05690"
     CDS             complement(632..994)
                     /locus_tag="VLA74_05690"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSF50237.1"
                     /translation="MLYCRYDLEINRLEHLCEENKIAFVMSEIIQGEGGVNVASRKFI
                     KNLFGTTRKYHVPLIIDEVQSGIGGTGRWRAYEYYDTKPHIKAVAKSIQIGVVLFDQI
                     LEPKRKGVLSSTWVGEAE"
     gene            1093..1248
                     /locus_tag="VLA74_05695"
     CDS             1093..1248
                     /locus_tag="VLA74_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50238.1"
                     /translation="MQHTPGSGPVFLYIIFNAFSRASAPLLIRKVLKFFPEMEINFTA
                     ISRCSSL"
     gene            1578..>2106
                     /locus_tag="VLA74_05700"
     CDS             1578..>2106
                     /locus_tag="VLA74_05700"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSF50239.1"
                     /translation="MKFVNEQTYESFLYKGQENKFHKKFDNAIEMLKKEIGGNNVFPI
                     IIDNKKIFTKSKYKHISPVDRRMILGYISRTTSVEVNKAIDSSYLAFEKWRNVDYRER
                     IEILKKAVKDISHRKFELAALLTLENGKNRYEAVADVDEAIDFITYYCFEMKMNNGFK
                     AKNLVSKKNEKNISVM"
BASE COUNT          706 a          350 c          313 g          737 t
ORIGIN      
        1 caggatatgt ggcaacagaa ctgaagttaa taggtgaata tacactggat tactctatgt
       61 ttcatcaacg tggttatata ttcgtagcat acggaattca aaagaaagat caacaaacac
      121 taggtgtcat ggaaaaaata gaggtaaatt cattatcttt agacagaatc aaacaacttt
      181 tgagagaagg aaaaatatta aatgctgctt cgattgttgc gttgtataaa gcaatagaat
      241 atcacgagga aaggatcaat aaaaactagg ttgatttgtt gttttcaata ttcattattt
      301 atttgtacct tccttatcaa cttttataat catctctaat cctaaattta tctcttcttt
      361 ggatattatc aacggtggca aaatcctaat agttttatgt tcagccgcta gaactaaaag
      421 tcctacttta aataatttta ttattattcg atccctttcc ttcgcacttt taaattcgac
      481 tctgatcatt aatcctaaac ctctaacttc tgtaattgaa tcaagttttt ccataatttc
      541 ttctaatcac tttatcatca atctacccat ctcctcagcg tggttaggca aaccttcatt
      601 gtcgataatc ttttggcacc aaatgtcata tctattctgc ttcccccacc caagtacttg
      661 ataatactcc cttacgttta ggttccaaaa tttgatcaaa tagaacaact cctatctgaa
      721 ttgatttagc gactgctttg atgtgcggtt tagtatcata gtattcatat gcccgccatc
      781 ttcctgtccc accaatacca gactgaacct catcgataat taaaggcaca tgatattttc
      841 tagttgtacc aaatagattc tttatgaatt tcctacttgc aacgttcacc ccaccttcac
      901 cttgtattat ttcactcatt acaaaggcta tcttattttc ttcacataga tgttctaagc
      961 ggtttatttc taaatcatat ctgcagtaaa gaattttatt cttttcactg ggagttcggg
     1021 gaagtttatt ttatgtacct ctttactgtt gtaaagaaaa atgcactcag ggttctgcca
     1081 tgaaagctat tcatgcaaca tactcctgga agtggcccag tatttctata tattatcttt
     1141 aatgcatttt caagagcctc tgctccacta ttaataagga aagttttaaa attctttcca
     1201 gaaatggaaa ttaattttac agctatctct agatgttcct cactttaaat ccttaccagc
     1261 aattttgtgt accccttcat ttaaattttt tttagaattt tcattaattc tggatgggca
     1321 tatgctagtg cacatgaagc aatgttggag caaaatctag atattttttc ccgtcaatat
     1381 cttccagaaa acatcctttt ccacctttga ttaccatggg atataaaaag gttgaatcgt
     1441 aagtttttaa tcctactaat aattaatgct gaccgtttat gttgcatttt cattcagata
     1501 attataattt aaatattatt actatgttaa tattattcat taaattattt aatagtgggt
     1561 tattaaatac tatttgtatg aaatttgtca atgaacaaac atatgaatcc tttctttaca
     1621 aaggccaaga aaataaattt cacaagaaat tcgataacgc cattgaaatg ctaaaaaaag
     1681 aaattggcgg taataatgtt tttccgataa ttattgataa caagaaaata tttactaagt
     1741 cgaaatataa acacatatcg cctgttgaca gaagaatgat tttgggatat atatcaagaa
     1801 caacatcagt ggaagtcaat aaggctattg attcctcata tttagctttt gaaaaatgga
     1861 ggaatgttga ttatcgagaa agaattgaga tacttaagaa agcagttaaa gacatcagtc
     1921 atagaaagtt tgaattggct gcgttattga ctttggaaaa tggaaagaat aggtatgagg
     1981 cagttgctga tgtagatgaa gcaatagatt tcataaccta ttattgtttt gaaatgaaaa
     2041 tgaataatgg tttcaaagca aaaaatttag tttcaaaaaa aaatgaaaag aatatcagtg
     2101 taatga
//
LOCUS       DATIAS010000290         6827 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1141081, whole genome shotgun sequence.
ACCESSION   DATIAS010000290 DATIAS010000000
VERSION     DATIAS010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6827
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141081"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..434
                     /locus_tag="VLA74_05705"
     CDS             297..434
                     /locus_tag="VLA74_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50240.1"
                     /translation="MTKIKEKMSNLIASAAPLDDCNNNKLDQTVFQKVIIGNDLSIFL
                     L"
     gene            441..2132
                     /locus_tag="VLA74_05710"
     CDS             441..2132
                     /locus_tag="VLA74_05710"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HSF50241.1"
                     /translation="MPVSTTTGTASTTAISKLNFPFSLTKDQVEAVEAWMENDFRGTI
                     LYSTGTGKTEIAFECAKRVASIIAHSPSTTIPSSQSNPQNTTTFNILLLVPRITLIEQ
                     NIKRLVSYGIPRENIGSYFGERKEIREITIATYQSIIRNLDIIRKSNMVIFDEIHLVS
                     DSAKVFRNIFDAVLEDHKKAILGLTATLDETDLDKYNTILTLLPPVKRYQIKRAVSDK
                     RLAKPIVIPVKVSLTEKEQEEYDTCSSKIKKISNRFKKYDAQSMTVLLKKGGFVSGMA
                     KAWFLNVRKRKLLLSCAENKLLSAVNLVTKKFPNERIMVFSETIDSINKLKDMLELYG
                     TKSKVIDSKTSAGKRQKILNQWGKDFYPLLSVHTLEIGFDIPQVRIEIILATTSNMNQ
                     VVQRIGRVIRKYEGKDLALIYVIYISDTKDDDILQVIRKAITTTTTTEEIAADSIEGK
                     RDSFINNKMKSAEKRRLEKAYKIIESTLYKPMIIELKDCGYNTNSGGGSSEESNNIQN
                     ILEKNNKKLFRVRSSLKEKNKYYDVDIENKTCTCPDFNFRKNKCKHIVATELYLF"
     gene            2181..2897
                     /locus_tag="VLA74_05715"
     CDS             2181..2897
                     /locus_tag="VLA74_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50242.1"
                     /translation="MAKSTITEGICLYCSKSYSGLAMTRHLESCEKRINFYLEMNKKT
                     KSQSNNIVFLLSISSKYYPEYWMFLEVDGRSKLKAIDNFLRDTWLECCRHLSSFTIKG
                     QEYESQLDPIPDPFMNENSKTMSESASSVFQTGINIDYVYDYGSSTELVLKVISDIPG
                     RISGKGKVKLIARNNELVFKCTKCKKEIATKICTVCIHEKDRNRASFCDNCVNLHSCG
                     EEMALPIVNSPRSGECGYEG"
     gene            3003..3269
                     /locus_tag="VLA74_05720"
     CDS             3003..3269
                     /locus_tag="VLA74_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50243.1"
                     /translation="MEIVIHPIQTELEDEDILDLFADSISREFTSSNVTIGPTLEFNI
                     HGLIDKPRNQIRSPDLLNRILNKIQPTRSKKILVICNIDAYSVI"
     gene            complement(3505..3885)
                     /locus_tag="VLA74_05725"
     CDS             complement(3505..3885)
                     /locus_tag="VLA74_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50244.1"
                     /translation="MLHGYGEFNKFLDEVVTSMEEAIDDDESQKENNKETLEYIKTIR
                     SEFETIHSELKVFFSARDEEKIMKNLNITLNLLEKLQEAFNKTEFQQFNKTVEEGFIS
                     FFFNIEISLLHSRIARIISKNYSK"
     gene            4654..5049
                     /locus_tag="VLA74_05730"
     CDS             4654..5049
                     /locus_tag="VLA74_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50245.1"
                     /translation="MVKLTELEKTILKKRYYTIAALKDELALQLSTAANYKINSEINH
                     IEIKYKYHHYAQKLLYLTSISKIEDIPDFEIKLSDLSPILKQELENLDKETLNEVVID
                     AICRLYESVSFKRFRESRIISKIRWRFVK"
     gene            5046..6563
                     /locus_tag="VLA74_05735"
     CDS             5046..6563
                     /locus_tag="VLA74_05735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50246.1"
                     /translation="MSEPQPSSKNSQNDKENSLLGKSGSSNITSQEEFSLPITKSDLL
                     SQLDPILVEQLAPHTWEIINYDLLKLYIAHREHKQIILASIQNKKISRQDNHLNLSLT
                     SEINSIKLSKIIIGAIPVEISRHEDPLGLASENKYTIKFQTQIETLNTFTLGPSSLDE
                     IVQELHNRTLILDHNKAAEALSAIILSMEKDNKVTIKREIITPGYYLVDGKITIGGKN
                     NNQSNNISKDQIANCLELLEIIQQKCKNDKVFPTIIKWSCITPFVYVMKQKKNNKMWI
                     PWLYLYGSSRTGKTTYGDILCAIHGNYQDEKYKIPFTNVDTVAKLGEALSKSTFSLVI
                     NESGAISDDSKYNKNLIEMIKIAIEGPIARSKFLHKTIYTEISSFCACIFTSNSAPPS
                     DIGFRRRIIAIPFTQKDEYTVEEINEFEKLLNHRVLELKVVGDFATSYILEHQDLLLD
                     SNNKKDWDEIAKLVLYEMYKIVEREPPEWIEYKIDNEIQFQENKEEIDLVLKFFH"
     gene            6629..>6827
                     /locus_tag="VLA74_05740"
     CDS             6629..>6827
                     /locus_tag="VLA74_05740"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50247.1"
                     /translation="MFTLTTSLPDESWCTSVLRQVRWKKNNNVICPRCQSYNIKKDGY
                     YRSYQKYFCKQCERWFNDKTGT"
BASE COUNT         2626 a          989 c         1080 g         2132 t
ORIGIN      
        1 ttgttcttct tccatctaac ctgtcgaagt acgcttgtac accaactttc atcaggaaga
       61 gatgtagtta aagtaaacac atcttaatta ggtgttatcc agctttaagc ttgactgaaa
      121 catttgtcaa taagagcgaa tcgaattact acattaatat attatagctt ctactcagat
      181 attacgattt tatattatta catttacaat aaacacaaaa aaattatact agttatagga
      241 cgcgccgaaa atcctgtcat gccaatttca atggaataaa tagacttagt aatgttttga
      301 ctaaaataaa agaaaagatg tctaatttaa tagcaagcgc cgcgccgctt gatgattgca
      361 acaacaacaa attagatcaa accgtctttc aaaaagtaat aataggaaat gatctatcaa
      421 tatttttgtt ataatagtaa atgcctgtgt ctactactac tggtactgcc tctactacag
      481 ctatttctaa actgaacttc cctttttccc ttacaaaaga tcaagttgaa gcagtggaag
      541 catggatgga aaacgatttt agaggtacaa ttttgtatag tactggaact ggaaagactg
      601 agatagcctt tgaatgtgca aaaagagttg ctagtattat tgctcatagc ccttctacta
      661 ctattccttc ctcacaatct aatcctcaaa atactactac tttcaatatt cttttacttg
      721 tacctagaat taccctgata gaacaaaata tcaaaaggtt agtctcctat ggtataccaa
      781 gagaaaacat aggctcatat tttggagaaa gaaaagaaat tagagagata acaatagcta
      841 catatcaaag cattattaga aatcttgata ttatccgtaa atccaacatg gtgatttttg
      901 atgagattca tttggtaagt gattctgcaa aggtatttag aaacatattc gacgcagtgt
      961 tagaagatca taaaaaagct atcttgggtc ttaccgctac acttgatgaa acagatctgg
     1021 ataaatacaa tacaattctt acattgttac ctccagtaaa aagatatcaa atcaaaagag
     1081 ctgttagcga taaaagacta gcaaaaccaa tagttattcc tgtcaaggta agccttactg
     1141 aaaaagaaca agaagaatac gatacttgtt cttctaaaat aaagaagatt tcaaaccgtt
     1201 tcaaaaaata tgatgctcaa tcaatgactg ttttattaaa aaaaggtggc tttgtcagtg
     1261 gaatggctaa agcatggttt ctaaacgtaa gaaaaaggaa actactgtta agctgcgcag
     1321 aaaataaact attatcggct gtaaatcttg taacaaaaaa atttccaaat gaaagaatta
     1381 tggtttttag tgaaactatt gattctataa ataaacttaa agacatgctt gagctatacg
     1441 gaacaaaatc taaagtaata gatagtaaga caagtgccgg caaaagacag aaaatcttga
     1501 atcaatgggg aaaagatttc tatccacttc tttcagtaca taccttggaa ataggattcg
     1561 atataccgca ggttagaata gagattatct tagcaacaac ttccaatatg aatcaagtag
     1621 tacaacgtat tggtagagtt atccgaaaat atgagggaaa agatctggca ttaatttatg
     1681 tgatctatat ttcagataca aaagatgatg atattcttca ggtaataagg aaagcaataa
     1741 caacaactac aacaacagaa gaaatagcgg cggattcaat tgaaggtaaa agagattctt
     1801 ttataaataa taaaatgaaa tctgcagaaa aaagaagact tgaaaaagct tacaagatta
     1861 tagaatctac tctatacaaa cctatgataa ttgagttaaa agattgtgga tataatacta
     1921 atagtggtgg tggtagtagt gaagaaagca ataatattca aaatatacta gaaaaaaaca
     1981 ataagaaact atttagagtt agaagtagtc taaaggaaaa aaacaaatat tatgatgttg
     2041 atatagaaaa taaaacatgt acgtgccctg attttaattt tagaaaaaat aaatgtaagc
     2101 atattgttgc tacagaattg tacttatttt gaaaatatta tgttataaaa taaataacga
     2161 atcaactata atgaatttag atggcaaaaa gtactatcac tgaaggtatc tgtctctatt
     2221 gttcaaaaag ttattctggt ctagccatga caagacatct tgaatcctgt gagaaaagga
     2281 taaattttta cctagaaatg aataaaaaaa ctaaatcgca gtcaaataat attgtttttc
     2341 ttttaagtat ctcttccaaa tattatcctg aatactggat gtttcttgaa gttgacggta
     2401 ggagtaaact caaggctata gataatttct tgagagatac atggcttgaa tgctgccgtc
     2461 acttgagctc tttcaccatt aaaggtcagg aatatgaaag ccaactagat ccaattccag
     2521 atcccttcat gaatgaaaat agcaaaacca tgtcagaaag tgcaagtagt gtatttcaaa
     2581 ctgggataaa tattgattat gtatacgatt atggaagcag taccgaactt gtattgaagg
     2641 ttatttctga tattcctgga agaataagtg gaaaaggaaa ggtaaaactt attgcaagaa
     2701 ataatgaact tgttttcaaa tgtacaaagt gcaaaaaaga gattgctaca aagatctgca
     2761 cggtctgtat tcatgaaaag gatagaaata gagcgtcatt ctgcgataat tgtgtaaacc
     2821 ttcatagctg cggagaagaa atggcattac caatagtaaa ttctccaaga tcaggtgaat
     2881 gtggatatga gggttaaaat ctgtttttag cgatatcaaa atggaaatct gtccctatca
     2941 ttcgttcata attttactag cattagaaat catttaacaa ataatactac tattagatac
     3001 atatggagat tgttatccat cctattcaaa cagaattaga agatgaagat attctggatt
     3061 tatttgctga ttctatctca agagaattta ctagttcaaa tgtaactatt ggtccaacat
     3121 tagaatttaa tattcatggg cttattgaca aacctagaaa tcagattaga tcaccagatc
     3181 ttttaaatcg gattttaaat aaaatccaac caacaagatc aaagaagatt ctggttatat
     3241 gtaatataga tgcttattca gtgatctgaa ttttgtattt ggagaagccc atttaggaga
     3301 acgtgtttca gcaatatatc ttccaagatt aagagaattc tatgctctta aacctgatga
     3361 actattattt tgagatttga atcatatatg cttaatctaa attctaatga tccatttact
     3421 caaattttat aaataaagaa gttctataag cattttattt taggtctctt gtatagtata
     3481 gttgaccagt ataatattct ctcttcattt actataattc ttggaaataa tccttgctat
     3541 tctggaatga agaaggctta tttcaatatt gaagaaaaaa gaaatgaatc cttcctctac
     3601 cgttttatta aattgctgga actctgtttt attaaatgct tcttggagct tttcaagaag
     3661 gtttaatgtg atattaaggt tcttcataat tttttcctca tctctagcag agaagaatac
     3721 cttgagttca ctatggatag tttcaaattc agatcttatt gtctttatat attctaacgt
     3781 ttctttatta ttttctttct gagactcatc atcatcgatt gcttcttcca tgcttgtcac
     3841 cacttcatct aaaaatttgt tgaactcacc ataaccatga agcattttct tgcaagaatt
     3901 aatggtatgc gaggttacca actgactgaa ttgaaaatag tagttttcta tttattttcg
     3961 ttatgattat agcgactttt acaatttttt gctcttttct gattatttta gttaagttta
     4021 aaatgtacaa taccaataga caaggaaggt gtagctttaa ctacatctct tcatgataaa
     4081 aaaactgctg tttcagtgta ctgaaaaaaa caaaataaag ttcaaaaatc gtatattcat
     4141 actttcattc ttttggttta tatcattgtg ataataaaag aatgtgtcat gcattttagt
     4201 aattcattac acgatactga tttcaaaaat cgaacctttt gtgaaaaatg caaaaataaa
     4261 ttatgaacta aaagtatggt tcatatgttt tcaatttaac tcctttaggt agcacaaggt
     4321 agcgctccct ataacatata tcaaaaaaat tattttttat agaaataact atattatata
     4381 atataatgaa taataaataa aatattcttt attagattag atcatttcct agttttagat
     4441 agtatttaaa cagggaaatc tttcatattt ataagcattt gttagctatg tatgtcggca
     4501 aaattgaata aaaatcatat aagattaaaa tgtgtttgcg gacatgaatg gctgtaccaa
     4561 ggcagtaaat caaaatttgc ttgctgtcct tcatgccgat caaacatctc catcaaaaaa
     4621 atagaataac agaagaaaat aatcaacagg agggtggtga aactgactga gttagaaaaa
     4681 actattctaa aaaagagata ttatacaatc gccgcgctaa aagacgaact agctcttcaa
     4741 ctttcaacag ctgccaacta taaaattaat tctgaaataa atcatattga gataaaatac
     4801 aaatatcatc attatgccca aaaactacta tatttaacaa gtattagtaa aattgaggat
     4861 attccggatt ttgaaattaa attatctgat ttatctccaa tcttaaaaca agaattagaa
     4921 aacctagata aagaaaccct caatgaagta gtaattgatg caatctgcag actttatgaa
     4981 tctgttagtt ttaaacgatt tcgtgaaagc agaataataa gtaaaatcag gtggagattt
     5041 gtaaaatgag tgaaccacag ccttcttcaa agaatagcca gaatgacaag gaaaatagtc
     5101 tcttaggaaa aagcggcagc agcaatatta catcacaaga agaattctca ttgccaatta
     5161 caaaatcaga tttgttaagc cagttagatc ctattttagt agaacaatta gcgcctcata
     5221 cttgggaaat tatcaattat gatctattaa aattatatat tgctcataga gaacataaac
     5281 agataattct tgcatcaatt caaaataaga aaatatctag acaagacaac catctcaatt
     5341 tatctcttac atcagaaatt aattctataa aactttccaa aataataatt ggagcaattc
     5401 cagtagagat ttcaagacat gaagatcctc taggattagc atctgaaaat aaatatacaa
     5461 taaaattcca gacacaaata gaaactctaa atacctttac attaggacct agttctttag
     5521 atgagatagt acaagaatta cacaatagaa ctcttatatt agaccataac aaagcagctg
     5581 aagctctttc agcaataata ttgtctatgg aaaaagataa taaagtgact ataaagaggg
     5641 aaataattac accaggctat tatctggttg atggtaagat tactattgga ggtaaaaata
     5701 acaatcaatc gaataatatt tcaaaagatc agatagccaa ttgtttagaa ctactagaaa
     5761 taatacagca aaaatgtaaa aatgataaag tatttccaac tataataaaa tggtcttgta
     5821 ttactccatt tgtatatgta atgaagcaga aaaaaaacaa caagatgtgg ataccttggc
     5881 tttatctcta tggctcttca agaactggta aaacaacata tggagatatt ttatgtgcta
     5941 ttcatgggaa ttatcaagat gaaaaataca agattccatt taccaatgtt gatactgttg
     6001 caaagttagg agaagcatta tcaaaaagta ctttttctct agtaataaat gaaagcggcg
     6061 caatatcaga cgattcaaaa tacaataaaa acttgataga aatgataaaa atagcaatag
     6121 aaggaccaat agctagaagt aaatttttac ataaaactat ttacacagaa atatcatctt
     6181 tttgtgcctg catatttaca agtaattctg cgccgccttc tgatatagga tttaggagaa
     6241 gaataatagc aataccattc acacaaaagg atgaatacac agtagaggaa ataaacgaat
     6301 ttgagaaatt gttaaatcat agagtattag agctaaaagt tgtaggggat tttgctacta
     6361 gctatatact agagcatcaa gatttactat tagattctaa taataaaaaa gattgggatg
     6421 aaattgccaa actagttctt tatgaaatgt acaaaattgt agaaagagaa cctcctgagt
     6481 ggattgaata caagatagac aatgagattc aatttcagga aaataaagaa gagatagatc
     6541 tggttcttaa gttttttcat taataaaata cgctcttatt gacaaatgtt tcagtcaagc
     6601 ttaaagctgg ataacaccta attaagatgt gtttacttta actacatctc ttcctgatga
     6661 aagttggtgt acaagcgtac ttcgacaggt tagatggaag aagaacaata atgtaatttg
     6721 tccacgttgt cagtcttata acataaaaaa agatggttac tacaggtcat atcaaaagta
     6781 cttttgtaaa cagtgtgaga gatggttcaa cgacaaaaca ggtacca
//
LOCUS       DATIAS010000291         3277 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1141396, whole genome shotgun sequence.
ACCESSION   DATIAS010000291 DATIAS010000000
VERSION     DATIAS010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141396"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..772
                     /locus_tag="VLA74_05745"
     CDS             260..772
                     /locus_tag="VLA74_05745"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HSF50248.1"
                     /translation="MTIIVTVLLGFIAYNVNEAIFVYVLSETSEEIHNDIMSKNVLDT
                     QYLKGIAEIGGFVINTDIALTDKQKQDGLSIRNNMQENEGMIFVFKEPKQQSFWMKGM
                     KFPIDIIWLDANLSIVHIEKNLQPCESFISCPSYRPSSNALFVLETVSGFADSHDLKI
                     GKKINFKLSE"
     gene            complement(856..1884)
                     /locus_tag="VLA74_05750"
     CDS             complement(856..1884)
                     /locus_tag="VLA74_05750"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSF50249.1"
                     /translation="MRTIIFEKPGLENLKDMEVPIPKINENEVLIRVKRVGINPIDYF
                     TVTGFYGLFSEKRIFPNPIPHIPGMEFSGEVEKVGSKVSEVNVNDHVIVYNRTFDSEC
                     DQCKSGREMLCRKGSLIGVTTNGGLSEYVSLRKENVIKIPKNLDWNIASSLSVSALTA
                     YHALNLSLITKDDTLLVYGASGSTGMFAIQFGKLKKAKVIAVSKKSWLKELGADFSIS
                     DYDKVPEITSNLTSGKMADVVINSLGKQTWESSLNCLNFNGRLVIFGILTGNIVQFDI
                     QPIYLKQIQIIGSNGGTILELKNIIKCSNRLKVRVWKVFSLEQTGDALKSLFDISRDG
                     RIMIDLER"
     gene            1979..2125
                     /locus_tag="VLA74_05755"
     CDS             1979..2125
                     /locus_tag="VLA74_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50250.1"
                     /translation="MNISIVYEGLRRILSQKYSPFIGNDILRNVLSLNPYHRNAQKDE
                     NVTK"
     gene            complement(2434..2712)
                     /locus_tag="VLA74_05760"
     CDS             complement(2434..2712)
                     /locus_tag="VLA74_05760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50251.1"
                     /translation="MPLQNNPIDALLYCGHIIKKGRLNIKRDDEQYLDIEFIDGNISI
                     NLHSLSIASSDECMDNIFLKLNLLKNLFTLYQHKKVIFKYKGRVIFKK"
     gene            complement(2789..2953)
                     /locus_tag="VLA74_05765"
     CDS             complement(2789..2953)
                     /locus_tag="VLA74_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50252.1"
                     /translation="MNSMNSNDSTHQWVQIITEILDRLTGKGALIEYSLENLTIDLPK
                     ATGLNGKELC"
BASE COUNT         1175 a          521 c          455 g         1126 t
ORIGIN      
        1 taattcgcca aagtttaata caactagatt ttgtcctaat tgtggtatca ctgttacaaa
       61 acacattccc caatccgacc tagaaaagga tgaaaccata cctagatttt gcagaaactg
      121 tggatcccta attaatgaaa caaaaatcca tgaaagtaat aaataaattc aatatacaaa
      181 atagataaat cctaaaaaca atcttaaata aactgaggac tagatattga aaataaaaaa
      241 ttttaacagt agattaacaa tgacaatcat agtcacagta cttttaggtt ttatagcata
      301 taatgtgaat gaagcaatat ttgtttatgt tctctcagaa acctccgaag aaattcacaa
      361 tgatataatg agtaaaaatg ttttggacac gcaatatttg aagggtatag cagagatagg
      421 aggattcgta attaatacag atattgcatt gacagataag cagaaacaag atggactatc
      481 aataaggaac aatatgcaag aaaacgaagg aatgatattt gttttcaaag aaccgaaaca
      541 acagagtttt tggatgaaag gtatgaaatt tccaatagat atcatatggt tggatgccaa
      601 tctatccata gtgcatattg agaaaaattt acagccctgt gaatcattta tatcttgtcc
      661 ttcatatagg ccatcatcta atgcactatt tgttctagaa acagtttcag gatttgcaga
      721 tagtcatgac cttaaaatag gcaagaaaat aaatttcaag ttatcagagt agaccatatc
      781 cttaataaaa cattatttcc tacttttata aaaatagcaa tgatggtgaa aattaggatt
      841 tatctggatt tctggctatc tctcaaggtc tatcattatc cttccatctc tagaaatatc
      901 aaatagactt ttcaatgcat ctccagtctg ttctaaagaa aataccttcc ataccctaac
      961 cttaaggcga ttagaacatt ttataatatt ttttagttct agtatagttc cgccatttga
     1021 gccaatgatt tgaatttgtt ttagataaat aggttgaata tcaaattgaa ctatattacc
     1081 agtcaatatt ccaaagataa ccagtcttcc attaaaattc aaacaattta gacttgattc
     1141 ccaagtttgt tttccaaggg agttaatcac tacatcagcc attttaccac ttgtcaaatt
     1201 tgatgtaatt tccggaactt tatcataatc tgatatagaa aaatctgcac caagttcttt
     1261 cagccatgat tttttactca cagcaattac tttagccttt tttaatttac cgaattgtat
     1321 agcaaacata ccagtactgc ccgatgcacc ataaacaaga agagtatcat ctttagttat
     1381 taaagaaagg ttaagagcat gatatgcggt gagagcagaa actgacaaac ttgaagcaat
     1441 attccaatct aaattttttg gaatcttgat gacattttct tttcgtaagg atacatattc
     1501 cgataatcca ccattggtag taactcctat cagagatcct tttctgcata acatttccct
     1561 tcccgatttg cattgatcac attccgaatc aaaggttcta ttatagacga ttacatgatc
     1621 atttacattt acttcactta ctttgctacc tactttttct acttctccag agaactccat
     1681 acctggaata tgcggtatag gattcgggaa tatcctcttt tcagaaaata gaccataaaa
     1741 tccagtgacc gtaaaataat ctatcggatt aatacccacc ctttttactc ttatcaatac
     1801 ttcattttca ttaatctttg gaatagggac ctccatatct ttaagatttt cgagacctgg
     1861 tttttcaaaa ataatagttc tcatcaaaga aatattatta aagaaattta ataaattgtt
     1921 tagtattaaa agtctttatt ataaagaaaa ttgtttctca taaaaaactc gaatgaaaat
     1981 gaatattagt atagtatacg aaggattacg aagaatatta tctcaaaaat attctccttt
     2041 tattggtaat gatattctca gaaatgtcct aagtttaaat ccttaccatc gcaatgctca
     2101 aaaagatgag aatgttacta aataaatcaa ttgtagtata gaatgtcagt gatattcagg
     2161 agcagaggag cggatagata tatcatatat ccacaataat caatatattt gaagttcctt
     2221 agaaataact agacaagatc tcatggaaga gatttaagtc atgataaaat aatatttggt
     2281 ggtccctaat gagaaaaagc aatagactaa ataaattctc ttttcgataa aatcaacata
     2341 aatctgagca aagtcgaaga attatttaaa actgcacaaa agaaacatct atagtttttc
     2401 tttctgttcc aaatttttta aaagataata tttttatttc ttgaatatga ctcttccttt
     2461 atacttgaaa ataacttttt tgtgttgata caatgtaaat agatttttta gtaaatttaa
     2521 ttttagaaaa atattatcca tacactcatc agaagatgca atacttaagg aatgtaaatt
     2581 aatggatatg ttaccatcaa taaattctat gtccaaatat tgttcatcat ctctttttat
     2641 attcaaacgt ccttttttga tgatgtgacc acaatacaat aacgcatcta ttggattgtt
     2701 ttgaagaggc atttcatgtg ctttaaaaaa ttaattatca gttgaatgag tctcagcttt
     2761 aatagtaatt ttgccattga ttgtccattt agcacagctc ctttccattg aggcctgttg
     2821 ctttaggaag atctattgtt agattttcta agctatattc tattaaagct cctttgccag
     2881 tcaacctgtc aagaatttct gtaattatct gaacccattg atgagtagaa tcattagaat
     2941 tcattgaatt cattgaacta ttaatcgttt ttagctaata aaactttcct gagaataaaa
     3001 tgaatttcgg ttgtattata tagaaaatat agatgatata ttcaaaatct tattatcttt
     3061 tgaagtgata tgggtaaaat tatttccacg actgttacta tttttccgaa atttttgatc
     3121 tagaaattat ccaattccat ataaacaggt tccctcaaga ataagtgatt tggtttttat
     3181 aattgagtta ttttgatatc ttgtaactga aagtatgata cccaaaatca gtaatacctc
     3241 tactcttact acttagcaat ggacttcaca ttcaatc
//
LOCUS       DATIAS010000292        12365 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1960021, whole genome shotgun sequence.
ACCESSION   DATIAS010000292 DATIAS010000000
VERSION     DATIAS010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 12365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12365
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1960021"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(363..701)
                     /locus_tag="VLA74_05770"
     CDS             complement(363..701)
                     /locus_tag="VLA74_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nascent polypeptide-associated complex protein"
                     /protein_id="HSF50253.1"
                     /translation="MMRGGNREMRRMLGKMGLEMNEMDGIEEVIIKTETKELFLIKPQ
                     VIEMKGKDSTIFQIIATDIEEKQREIPSFKDEDIVLVMQQANVSKEKAIQALTDSKGD
                     LAQAILTLTT"
     gene            complement(713..1198)
                     /locus_tag="VLA74_05775"
     CDS             complement(713..1198)
                     /locus_tag="VLA74_05775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HSF50254.1"
                     /translation="MKPLLLDPKRKLTGHIKLIFDTEVRDELPEIQCEFSKKTGRIKN
                     FSIDSKLFATLRKDGHLALTIFGAEKMVEYKEFKQNCVIPKEEAIPFIIKGKSLFCKH
                     VEWCGNNINIGSEVVVINRDNKVLAVGKSICSHLFMNKLQHGVAIKIREGIKSRNSPD
                     K"
     gene            1649..2095
                     /locus_tag="VLA74_05780"
     CDS             1649..2095
                     /locus_tag="VLA74_05780"
                     /inference="COORDINATES: protein motif:HMM:TIGR00270.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiprotein bridging factor aMBF1"
                     /protein_id="HSF50255.1"
                     /translation="MSSFCELCGNPIQGLKTVIIDGSLFNVCLSCSKRGKAYQPPTAK
                     KQVLKQTHDTPSFKKPSMFRSNKIDIFDESVLKPEFAKIIHQARMKKGYTQEYVANKI
                     NEKVILFKKIESGGIKPDELLCKKIERFLGIQLYQRLVEEDDEDET"
     gene            2096..3205
                     /gene="hflX"
                     /locus_tag="VLA74_05785"
     CDS             2096..3205
                     /gene="hflX"
                     /locus_tag="VLA74_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HSF50256.1"
                     /translation="MNVTKAILITYPTEESINEALSLAEAAGYKVEKIVKQKHITKSK
                     YGIGKGKAQEVNDMLKELKINVIIFDEVLKPSQQYNLASLCKKDVIDRERIILEIFER
                     RASNSESRIQIKLAQLRYEMIRIREKVRLAKIGEQPGFFGLGKYDADVYMLDVKSRMS
                     VLKKKLEKEEKRRNLYRVQRSKIGIPIISLVGYTSAGKTTLFNTLTGESKITGQGMFT
                     TLSTFTRVMNLRENKVLVTDTVGFVNKLPAYMIDAFKSTLHELLFSELILLVIDISQK
                     IKDVRIKLNSSLHIMNELQVPTGKIIYLLNKIDLTDLNDAYDKSIDLGLSNSEHIVLP
                     ISSTHGHNINKLKDLIETFICENKIAAKNNRKFFK"
     gene            3202..3735
                     /locus_tag="VLA74_05790"
     CDS             3202..3735
                     /locus_tag="VLA74_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(56)-2'-O)-methyltransferase"
                     /protein_id="HSF50257.1"
                     /translation="MNIAILRLGHRLVRDYRTTTHVALVARAFGCSKLYMTDIDDSIK
                     STLVDVNNRWGYNKFNFEIELVTNWKNILKRWKEKGGTVLHLTMYGINIDDVIPAIKK
                     NIDQILIVIGAEKVPSEVYRISDYNIAVSNQPHSEIAALAITLDRIFEGKQLKFDFKS
                     AKMKIIPSSTGKSIEKI"
     gene            3994..5835
                     /locus_tag="VLA74_05795"
     CDS             3994..5835
                     /locus_tag="VLA74_05795"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HSF50258.1"
                     /translation="MKTKDFMKIKQKPKSFTRPDEKWGLEKETDTFANQVKLYRQEKL
                     SDDDFRRYRLQHGAYGSRLRPDYSMIRIKVPGGEITPNQLEKIAQLSESFSIGSAHVS
                     TRQNIQLHWVQLEDVSEVMRGLVEVGLTTREACGNTVRNIMCSHFAGVCSAEMFDATP
                     YSKALAKFFLRNPISQNLPRKFKINFGCCDEHGLVRIADIGLIPDIKDGKKGFRIYLG
                     GGLGAASFIGHLLEDFTPEDHLLSTCMATIRIFDRHGNRENMARNRMRYLVNEMGWEK
                     FQKLILKERKIMQMTISESTRDLFAIQQFNYDSIQMSLSKVPKLNSKLPLVSESISLD
                     SSGYDRWLHTNTVTQKQKGYFTIFVTLGAGDITANQLRSLAVVIRDFSIEGVARNTPQ
                     QNFAIRYVDYNDLSKVYKRLNSSGLANPGALTITSAVGCSGTTSCNLAITNSHRLAKE
                     VQRNLLELGFDIDDSLRTSTIKISGCPNSCGQHEIATIGFFGGAARIGDTMAPVYTML
                     FGGSSGEESKLGKAIMRVPAKRVIEVIQKIVELYKQEKSNESLSLWIDHILAGNANGT
                     IKNIEDIKTALIPVVQLTPSEESPDLYQDYGNDIKFSAKTARGECAA"
     gene            5832..6743
                     /locus_tag="VLA74_05800"
     CDS             5832..6743
                     /locus_tag="VLA74_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSF50259.1"
                     /translation="MKKSVTIKENIKKNTQNRYKRHVIPPKDSVTKRQELKKSYSPLP
                     IICDVDTLRTLIRKKSVRVVDVRRSEDYKKAHIPTAVSLPLAKIISNDAPEQIIKILE
                     DIGVSNETPLVVYDDTFGALAARVAWTFQYVGHDNTSLLEMTFTNWKNLGLEIEKKNN
                     TFPRKVHSLKLNQSIHADANYVESIQNNPNKILIDSRERLNFLTEHIPNAKNIPYTML
                     GTVDNILRPVQDLKRFIENRGIEPDSEVITYCGSVGTLSGLAYYALKLAGVKNVKLYS
                     KSFKDWKALGKPKIEFKDANYWDLSAE"
     gene            complement(6903..7277)
                     /gene="hsp14"
                     /locus_tag="VLA74_05805"
     CDS             complement(6903..7277)
                     /gene="hsp14"
                     /locus_tag="VLA74_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal heat shock protein Hsp14"
                     /protein_id="HSF50260.1"
                     /translation="MAKEVMKEINNKSKEFYEFVLPPVDMLDNGKDLLIIIDLPGFDK
                     KDIDLRITKNILSIKANRKDNTEDSTSTVYFKHRPTKINKKIILPFSVEDEEITGTAN
                     YLDGIVTLRIPLKKSGSEIPIS"
     gene            7398..8660
                     /gene="truD"
                     /locus_tag="VLA74_05810"
     CDS             7398..8660
                     /gene="truD"
                     /locus_tag="VLA74_05810"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: protein motif:HMM:NF013322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HSF50261.1"
                     /translation="MANIVPDIDRQAGIDCYCTEFPGINGRIKEKNNDFYVSELINES
                     FLKSPHFSSQQNKTNKFPLFLLEKNGLDSNHALIDIKKKTGLNLRILGIKDAKAITVQ
                     YASAENTKNFPREIQTSKIRLSLLGFLSKPLSKSILIGNNFEIRIHNVLEDDLSVFSS
                     EINKIANFYGLQRFGSERMVTHLVGKAILKRQFDKAIEYLLCYTSIYDSKFSKEIREK
                     SRDPKNYRNLIKNIPKGMDLERKIMSVLADGKGPIFALRSLPISIRRLFVHAYQSYVY
                     NKCLSTAILEGEDIHICNNGDLCFEIEKPLIFGKIKKFSKVDCDENIIPAIRLVGYNF
                     QAGKDSRFDNIIRRILHDDGILPSNFYIKELQELSLQTGFRQTSLCCTDFMYSGSTIL
                     SFKLPKGSYATTLLRELIKPKDPIKCGF"
     gene            complement(8976..10217)
                     /gene="ilvA"
                     /locus_tag="VLA74_05815"
     CDS             complement(8976..10217)
                     /gene="ilvA"
                     /locus_tag="VLA74_05815"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006549 - isoleucine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HSF50262.1"
                     /translation="MSSELNLETKKFPVYEDILRSREVLKSFVGKTPLYKSNTFSKII
                     GTNVFLKNEALQKTGSFKVRGALYKIQSLSEEEIKYGIIAASAGNHAQGVAYAAGIRN
                     VPCTIVMPINASPAKIAATRSYNAQVILRGSDYDEAWIMAKEMARKEKKTIIHAFDDP
                     KVIAGQGSIGLELMEDLPDLDEVYIPVGGGGLAAGVAIAIKEKKRNVRIIGVESKAFP
                     AMKESLEKGSIQTKKGEFSIADGIAVKSPGNLTFEIAKKYLDDVVLVDDSSIVKTMFL
                     LMERSKLVIEPAGAASLAYLMTSTHKNKNKKVVSILSGGNVDMYLLGQVVAKGLMQMN
                     RMLKIFIQLPDKPGALKTVVDGISDLSVNIVEVIHDRLSSNIAAGTAGVYLSLELENE
                     KHSELLIEFLKRKEIDFKIIT"
     gene            complement(10279..11142)
                     /locus_tag="VLA74_05820"
     CDS             complement(10279..11142)
                     /locus_tag="VLA74_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50263.1"
                     /translation="MRLPLKGDDEFVSNINKEVDKIYYEFITFLKPKLIMQKVNVMLG
                     DGTITSSETFDPREIRNLFQSFLKVLDGWIISDISESKTDDLHRLFFQISTTIDKFYI
                     YGYFGIQFHALSFYNVDKRVIEIQKELIKLNQDQFESFSLLTEKGNERIKEELKKSGK
                     DMLNFEDLFTILFEDPQLMSRLEKIALLHEKEFPEIAILNRKRERLVLELNDMVRELY
                     RISTNGIDYNRLMQGEEGIISYFEIEGISNKKSGIRDPYINTKIIKKATTESILEKLK
                     EIVRKLKLVSS"
     gene            11316..11552
                     /locus_tag="VLA74_05825"
     CDS             11316..11552
                     /locus_tag="VLA74_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSF50264.1"
                     /translation="MVNCTLGSEEKIISELTTLSDVKEVRGTYGVHDVFVKVRSSDTE
                     SMNNTITNKIRKIPGITSTVTLVVIEEQGGKESL"
     gene            complement(11595..11807)
                     /locus_tag="VLA74_05830"
     CDS             complement(11595..11807)
                     /locus_tag="VLA74_05830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50265.1"
                     /translation="MIKLVTKISLQLLIVSWWIGASIALASFLIPVYNYHIIVAFIGW
                     SIIVGSTILIIYEIKKIKEEDRKTKS"
     gene            complement(12012..12112)
                     /locus_tag="VLA74_05835"
     tRNA            complement(join(12012..12054,12082..12112))
                     /locus_tag="VLA74_05835"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12049..12051),aa:Phe,seq:gaa)
BASE COUNT         4341 a         1922 c         1861 g         4241 t
ORIGIN      
        1 tcagcatttc cgttctttta ggcgttctaa taggatttat tatgagaata ttcaagaatt
       61 ttgaaactat aataattaag ataaaagcgt ttacttcagt taatagtttc tcatattcaa
      121 gtagaatctt tttgttctaa aatactagga tatttttatg ggatgtttac tacttatagc
      181 aagagaattt aatctaacgt accaaattat aacaactatg aactattttt agaattgaac
      241 ttttgatagg ctattgtttt caaaacttca atctaaagta ggcttcaaat aggatctgta
      301 tgaagaccaa aataacctat aacattccat aactaatctt gttctttaat taatcttatc
      361 atttatgtag ttaaggttaa aatagcttgt gctagatctc cttttgaatc ggttagtgct
      421 tgaattgcct tttcctttga tacatttgcc tgctgcatta ctaagactat atcttcatct
      481 ttaaatgacg gtatctctct ctgtttttct tcgatatccg ttgctattat ttggaaaatt
      541 gtactatcct ttcctttcat ttcaattacc tgtggtttta ttaaaaataa ttcctttgtt
      601 tcagttttaa ttattacttc ttctattccg tccatttcat tcatttctag acccattttt
      661 cctagcattc tacgcatctc cctatttcca ccacgcatca tttcttatta cctcatttat
      721 ctggggaatt tctgcttttt attccttctc taatctttat cgctacaccg tgctgaagtt
      781 tgttcataaa taaatgtgag catattgact ttccaactgc tagtactttg ttatctctat
      841 taatcactac gacctcagaa ccaatattga tattgtttcc acaccactct acatgtttac
      901 aaaataacga ttttccttta atgatgaacg gtattgcttc ttctttgggt atcacacaat
      961 tttgtttaaa ttctttatat tccaccatct tctcagcacc aaatatcgtt aaggctaaat
     1021 gaccatcttt gcgcaatgtg gcaaataatt tagaatcaat actaaaattc tttattctgc
     1081 ctgtcttttt agagaattca cactgaattt ctggaagctc atcccttacc tctgtatcaa
     1141 aaatgagctt tatatgacca gttaattttc ttttgggatc taataataat ggtttcaatg
     1201 attttgaata tacttattta acagaatatt tatgtttctt attttctttt ttttataaag
     1261 tattgaaaat gactttttcc atgacgataa attttagtgt atacaaaaat tggaaaagta
     1321 cacgaaataa ctaaatttaa tattctaaag ttatattaga atatttcata tatgatatct
     1381 gattttggta catcaattat atccaaattt tttgttatta tattactgtc tttgatattt
     1441 accttgacta agatatggta agacgagatg tgtcaactgc cagaattagt gattagtgta
     1501 agttaagtat ctcatatttc atcattatat acaaaccagc ttcttttaca catagaaaaa
     1561 taataagatt gcaggaaaat aatgtcaaac tatatttaca tcttaaaaag aaaaagactt
     1621 tatttcttgc tctatgtatt gttgatatat gtcatctttt tgtgaattat gtggtaatcc
     1681 gatacaaggt ctaaaaactg ttattatcga tggtagtctt tttaatgtat gtttatcttg
     1741 ttctaaacga gggaaggcat atcaaccgcc tactgcaaaa aaacaagttc taaaacaaac
     1801 acatgatacg ccttcattta aaaaaccttc catgtttagg tctaataaaa ttgatatttt
     1861 tgatgagagt gtattgaaac cagagtttgc caaaatcata catcaagcta ggatgaaaaa
     1921 aggttacact caagaatatg ttgctaacaa gattaacgaa aaagtcatct tatttaaaaa
     1981 aatagaaagc ggaggaatta aaccagatga attattatgt aagaaaatag aacgttttct
     2041 gggtattcag ttgtatcaaa gactagttga agaagatgat gaagatgaaa cttgaatgaa
     2101 tgttactaag gcaattttaa taacgtatcc tacggaagaa tcgatcaacg aagctttatc
     2161 attagctgaa gcagctggtt ataaggttga aaaaatagtt aaacagaaac atataacaaa
     2221 atcaaaatac gggataggaa aaggtaaggc tcaagaagtt aatgacatgc tcaaagaact
     2281 aaaaataaac gttataatct ttgatgaagt tttaaagcct agtcaacaat ataatttagc
     2341 aagtttatgt aagaaagatg ttatagatag ggagcgtatc attttagaga tcttcgaacg
     2401 cagggcaagt aattcggaat ctcgtattca gatcaaatta gctcaattaa gatacgaaat
     2461 gataagaatc cgtgaaaaag ttcgactagc taaaattgga gaacaacccg gtttttttgg
     2521 tctaggcaaa tacgatgcag atgtttatat gttagatgtc aaatcgcgta tgtctgtttt
     2581 aaagaaaaaa ttagagaaag aagagaaaag gagaaattta tatcgagttc aaaggagcaa
     2641 aataggtatt cctataattt cattggttgg ctatacttca gctggtaaga ctactttatt
     2701 taatactttg accggagaat ccaagattac tggacaggga atgtttacta cattatctac
     2761 atttacacgt gttatgaatc ttcgtgaaaa caaagtattg gtaacagata ccgttggttt
     2821 cgttaataag ttacctgctt atatgataga tgcttttaaa tcaactttac atgaactatt
     2881 attttcagaa cttatattat tagtgataga tattagtcaa aaaataaaag atgtcagaat
     2941 taaattgaat agttctcttc atataatgaa tgaattacag gttcccacag gtaaaataat
     3001 ttatttactt aataaaattg atttaactga tctcaatgat gcttatgata aatcgattga
     3061 tttagggtta tctaattctg aacatatagt tttgccaatt tcatctactc atggacataa
     3121 tatcaataaa ttaaaagatt taattgagac cttcatatgt gaaaataaaa ttgctgcgaa
     3181 aaataatagg aaatttttca aatgaatatt gctatacttc gtttaggaca tagattagtt
     3241 agagattatc gtactacaac tcatgtggcc ttggtagcaa gagcttttgg ttgcagcaag
     3301 ctttacatga cagatattga cgattcaata aaatcgactt tagttgacgt aaataataga
     3361 tggggatata acaagttcaa tttcgaaatt gaactagtta ctaattggaa gaatattcta
     3421 aagagatgga aggaaaaggg cggaacagtt cttcatctta ccatgtatgg aataaacatt
     3481 gacgatgtta ttccagcaat aaaaaagaat atcgatcaaa ttcttatagt tataggagca
     3541 gaaaaggttc caagtgaagt ttatagaata tccgattata atattgccgt aagcaatcaa
     3601 ccacattccg aaatagctgc tcttgcgata acattagata gaatatttga aggaaaacaa
     3661 ctaaaattcg attttaaatc tgcaaaaatg aagataatac cttcatcaac tggaaaatct
     3721 atagaaaaaa tttagtatac ataacaccat atttagtgat tttaaatgta ctaagtaaaa
     3781 gttcttttta aaaataatag taccgcgtac tgactattaa ttctatttct aaaaaatttt
     3841 gaatttcaaa tcttttcttt attatttaac caaaaaatta tccatttaat aaactataat
     3901 atttatacaa taacttgcca cagaattgca aatctaacgt tttaatatac cattccacaa
     3961 aaaatataag gtttcaaaca actcagtaat atattgaaga caaaagattt catgaaaatt
     4021 aagcaaaaac caaagtcttt tactagacct gatgaaaaat ggggtttgga aaaggaaact
     4081 gacacttttg ctaatcaagt taaattatat cgtcaagaaa aattatctga tgatgatttt
     4141 agaagatata gacttcaaca cggtgcatac ggttctaggt tgcgtccaga ttacagtatg
     4201 atacgtatca aagttcctgg tggtgaaata actccaaacc agcttgagaa gatcgcacaa
     4261 ttatcagaat ctttttctat aggatctgct catgtttcaa ctagacaaaa tattcagcta
     4321 cattgggtac agttagaaga tgtaagtgag gttatgaggg gattagttga agttggtttg
     4381 accactagag aagcctgtgg taacacggta agaaatatca tgtgtagcca ttttgctggt
     4441 gtctgttctg ccgaaatgtt tgatgctact ccttattcca aagcactagc aaagttcttt
     4501 ttacgtaatc ctatatctca aaatttgcca cgtaaattca aaattaattt tggttgctgt
     4561 gatgaacacg gtcttgttag gatagcagac ataggtttga ttcctgatat aaaagatgga
     4621 aaaaaaggat ttagaatata tcttggtggc ggtctaggag ctgcttcatt tataggtcat
     4681 ctgttggaag actttactcc agaagaccat cttctatcaa cctgtatggc tactatcagg
     4741 atattcgaca gacatggaaa tagagaaaac atggctagaa atagaatgcg atatttggta
     4801 aatgaaatgg gatgggagaa atttcaaaaa ttaatcttga aggaaagaaa aataatgcag
     4861 atgacaattt ctgaatctac acgtgatctt tttgcaatac aacaatttaa ctatgattct
     4921 atccagatgt cactttccaa agtcccaaag ttaaatagta aattgccact tgtcagcgaa
     4981 tccatttcct tagatagttc tggatatgat cgctggttac acacaaatac tgtaacacag
     5041 aagcagaaag gatactttac aatatttgta accttaggag caggtgatat aactgcaaat
     5101 caactaagat cattggccgt agtcattcgc gacttttcta ttgaaggtgt tgcaagaaat
     5161 acacctcaac aaaatttcgc aatacgatat gttgattaca atgatttgtc caaggtttat
     5221 aaaagattaa atagtagtgg attggcaaat cctggtgcgt tgacaataac ctcagcagta
     5281 ggttgttcgg gtactacatc ttgcaatctg gcaatcacca attctcacag attggcaaag
     5341 gaagtgcaac gtaatctttt agagctaggt tttgatattg atgacagtct tcgtacttcg
     5401 acaatcaaaa taagtggatg tcctaattcc tgtggacaac atgagattgc aaccatcgga
     5461 ttttttggtg gtgcggcaag aataggtgat acaatggcac cagtatatac catgctgttt
     5521 ggaggaagtt cgggggaaga atctaaattg gggaaagcca ttatgcgtgt acctgccaaa
     5581 agagtcatag aagttattca gaaaatagtg gaattatata aacaagaaaa atctaatgaa
     5641 tcattgagct tgtggataga tcatattttg gctggtaatg caaatggtac tataaaaaat
     5701 atagaagata ttaaaactgc tctgattcca gtagtgcaac ttactccatc tgaagagtct
     5761 cctgatttat atcaggatta cggaaacgat attaaattta gtgcaaaaac tgccaggggc
     5821 gaatgcgccg cttgaaaaaa agtgttacaa taaaagaaaa tattaaaaaa aatacacaaa
     5881 accgatataa gagacatgta ataccaccaa aagattctgt tacgaaaaga caggaattaa
     5941 agaagtcata ttcaccactt ccaataatct gtgatgtaga tacattaaga acattaatca
     6001 gaaaaaaatc tgttagagtt gtagatgttc gtagatccga agactataag aaagcacata
     6061 ttcccactgc agtctcatta cctcttgcaa aaataatttc taatgatgct cctgagcaga
     6121 tcataaaaat attggaagat attggagtat caaatgaaac tccactagtt gtctatgatg
     6181 atacttttgg agctttagct gcaagagtag catggacttt tcaatatgtc ggacatgata
     6241 atacctcgtt gcttgaaatg acttttacga attggaaaaa tcttggttta gaaatagaaa
     6301 aaaagaataa tacttttcct agaaaagtcc attctctaaa attaaatcag tctattcatg
     6361 cagatgcgaa ctatgtagaa tctatacaaa ataatcctaa caagatcttg atagattcta
     6421 gagaacgact aaacttttta acagaacata ttccaaacgc aaaaaatatt ccatatacaa
     6481 tgttgggaac cgttgacaac atattgcgac cagtgcaaga tctgaaacgt tttattgaaa
     6541 ataggggaat tgaaccagat tctgaagtga ttacttactg tggaagtgta ggtacgttat
     6601 ccggactggc atactatgca ttaaaattgg ctggagtcaa aaatgtgaaa ttatattcta
     6661 aatcatttaa agattggaaa gctttaggta agccaaaaat agaatttaag gatgcaaatt
     6721 attgggattt atcagctgaa tgatatctaa gaatttaatt gatcgaggat ggattatatc
     6781 ctacaatcat gttatagaaa tcattatttc ctgactcctg aaaagtttaa catgtaagaa
     6841 gctatcgacg aacaagttaa ccaaatctta attaaaagta atttttaatc acttatcgta
     6901 aattaagaaa ttggtatctc actaccactc tttttaagag gaatacgtaa agtaactatc
     6961 ccatctaaat aattggcagt tccagttatt tcctcgtctt caactgagaa aggtaaaatt
     7021 attttcttat ttatcttggt aggtctatgt ttaaagtaaa ctgtacttgt gctatcctcg
     7081 gtattgtctt ttctatttgc ttttattgaa agtatattct ttgttattct aaggtcaata
     7141 tcctttttat cgaatccagg taaatcaata ataatcaata aatcttttcc attatctagc
     7201 atatctacag gaggaaggac aaattcgtaa aattccttgg atttattatt aatttctttc
     7261 attacttctt ttgccatgta catcaccaat cccatatcta attaatttat actttgtttg
     7321 aatataaatc cttattttta ctctttgata tcgcatgtca ttgtattgtt tatatttatc
     7381 tttaatgacc tgattttgtg gcaaatatcg ttccagatat cgatcgtcaa gccggtatag
     7441 actgctattg tacagaattc ccaggcataa atgggagaat aaaagaaaaa aataatgatt
     7501 tctatgtttc cgaattaata aacgaatctt ttttaaaatc tcctcatttc tcttctcaac
     7561 aaaataaaac taataaattc cctctttttt tgttagaaaa aaatggtttg gactcaaatc
     7621 atgctttaat agacatcaaa aagaaaacag gattaaatct aagaatatta ggtatcaagg
     7681 atgcaaaggc cataacagtt caatatgcaa gtgcggaaaa tacaaagaac tttccaagag
     7741 agattcaaac ttcaaaaatt cggctatctt tattaggatt tttaagtaaa cccttgtcga
     7801 aatctatact cattggaaat aattttgaaa tacgaattca taacgtatta gaagatgatc
     7861 tgagtgtatt ttcatcagaa ataaacaaaa tagctaattt ttatggatta caacgatttg
     7921 gaagcgaacg tatggtgaca catttagttg gaaaagctat tttaaaaaga caatttgata
     7981 aagcaataga atatttactt tgttatactt ccatatatga ttccaaattc tcaaaagaga
     8041 tcagagaaaa gagtcgagat ccaaaaaatt atcgtaatct gatcaaaaat atcccaaaag
     8101 gcatggattt agaaagaaaa ataatgtctg ttcttgctga tggaaaagga ccgatttttg
     8161 cattaaggtc tctcccaata tctatcagaa gactatttgt tcatgcctat caatcctatg
     8221 tttataataa gtgccttagt acagcaatcc ttgaaggcga agatattcat atatgcaata
     8281 atggagatct atgtttcgaa atagaaaaac cattgatttt tggaaaaata aaaaaattta
     8341 gcaaagttga ttgcgatgaa aatatcattc cagcaatacg ccttgttggg tataactttc
     8401 aggcaggaaa ggatagtaga tttgataata taattaggcg aattttacat gatgatggaa
     8461 tattgccaag caatttctac ataaaagaat tgcaggaact aagtctacag actggattta
     8521 gacagacatc tctatgttgt actgatttca tgtattcagg atcaactatt ctttccttta
     8581 aattaccaaa gggatcatat gcaacgactt tgttaagaga attaataaaa cctaaagatc
     8641 caattaagtg cggattttaa aaatatagaa tttgatattt attaaaggaa actattcgat
     8701 ataacttcaa ttgtactttt gataaaacat atttcaggca tttcaaagat gaaagaaaat
     8761 aatgaattat gtttatgttt caaagaaatt caaatcaaaa acaatcccaa caacaaatca
     8821 ctagtgtttc ctagaatcaa ataattactc gatccaataa aatgcaaagt tatcgctacc
     8881 aacacaagat aaagtatatc aatgaaataa aactgattgt atctttaaat tgaggtatga
     8941 aataagatat aaagaaaaat aactattaac tgagtttatg taattatttt gaaatctatt
     9001 tcttttctct ttagaaactc tatcaaaagt tctgaatgtt tttcattttc caattctaag
     9061 cttaaataaa ctcctgctgt tcctgcagcg atatttgaac tgagtctatc atgtattacc
     9121 tcaacaatat ttacgcttag atcagaaata ccgtctacaa cagttttcaa ggctcccggc
     9181 ttgtctggta attgtataaa aattttcaac attctgttca tttgcataag tccttttgcc
     9241 actacttgtc caagtagata catatcaaca ttgcctcctg aaagaattga tacaactttt
     9301 ttatttttat ttttgtgagt actagtcatt aaataagcta aacttgctgc acctgcaggt
     9361 tcgataacta acttcgatct ttccatcaat agaaacatag tttttactat ggaactatca
     9421 tcaactaata ctacatcgtc gagatatttt tttgctattt caaaagttaa atttcctggc
     9481 gattttactg caattccatc agctatacta aattctcctt tttttgtctg aatggatcct
     9541 ttctctaaag attctttcat tgcaggaaat gccttcgatt caacaccaat aattctaaca
     9601 tttctttttt tctctttaat tgctatagca acacctgcag caagaccccc tccacctaca
     9661 ggaatataaa cctcatccag atcaggtaga tcttccatta actctaaacc tatagaacct
     9721 tgtccagcta ttaccttggg atcatcaaaa gcatgtatta tagtcttttt ctcttttctt
     9781 gccatttcct ttgccattat ccaagcctca tcatagtcag aacctcttag aataacttgt
     9841 gcattataag atcttgttgc agcaattttt gcaggagatg cattaattgg cattacaatt
     9901 gtacatggaa catttcttat acccgcagca tatgctacac cttgagcatg attacctgct
     9961 gatgcagcta tgattccata ttttatttct tcctcagata aagattggat cttgtaaagt
    10021 gctcctctta ctttaaagga tccagttttt tgcaaagcct catttttcaa gaaaacattc
    10081 gtacctataa ttttagaaaa agtattagat ttatagagag gagtttttcc aacaaagctt
    10141 tttaatactt ctctacttct tagaatatcc tcatagaccg gaaatttttt tgtttctaaa
    10201 ttcaattcac tgctcattat attaaagaat agattttcat ttctaattat aatttgctat
    10261 tttattaaaa aaagaagatt aactggatac tagttttaat ttacgaacta tttcctttaa
    10321 tttttcaaga atactttctg tcgttgcttt tttaattatt tttgtattta tgtagggatc
    10381 tcttatacca ctttttttat tactgatacc ttcgatttcg aaataagata taattccttc
    10441 ctctccttgc atcaacctgt tgtaatctat tccatttgta gatattctgt ataactctct
    10501 aaccatatcg tttaactcta atactaaacg ttctctcttt ctgttcagaa tcgctatttc
    10561 tggaaactct ttttcatgta gtaaggcaat cttttccaat cttgacatta gttgaggatc
    10621 ctcaaataat attgtgaata aatcttcaaa atttagcata tcttttccac tttttttcaa
    10681 ttcttctttt attctttcat ttcctttttc tgttaataaa gaaaaacttt caaattgatc
    10741 ttgattgagt tttattaatt ctttttgtat ttcaataact cttttatcaa cattgtagaa
    10801 tgatagtgca tgaaattgta tcccaaaata tccataaata taaaatttat ctatggtagt
    10861 ggaaatctga aaaaataaac gatgcaaatc atcagtctta gattcagaaa tatcagatat
    10921 aatccaccca tctaacactt tcaaaaagct ttgaaacaaa ttccgaattt ctcttggatc
    10981 gaatgtttct gaagaggtaa tagttccatc tcctaacatg acattaacct tttgcatgat
    11041 caatttgggt ttcagaaatg ttataaattc atagtaaatc ttatctactt ctttattaat
    11101 atttgaaacg aattcatcgt ccccttttaa aggtagccgc attttagata atcataatta
    11161 ttcaagttta aaatagattt tgaaaaactt ttagtctgta tttattctca atagctttgg
    11221 taaatatctt atgtattagg caatattttg gttaaaaaaa aataaaacta aaatattaat
    11281 caaaataaaa taaattaatg cccacggcat atattttggt taattgtact ttaggctcgg
    11341 aagaaaaaat aattagcgaa ttgacaacgt tgtcagatgt gaaggaagta agaggaacct
    11401 atggcgttca tgatgtgttt gttaaagttc gatccagtga tactgaatca atgaataaca
    11461 cgatcacaaa caagataagg aaaatccctg gtataacctc aacagttact ttggtagtaa
    11521 tagaggaaca aggtgggaaa gaaagccttt aatctaattt tatttattta tttttagcaa
    11581 ttctaaatcg ttatctatga cttagttttt ctatcctctt cctttatttt ctttatttca
    11641 taaattatta gtatagtact tccaacaata attgaccatc caataaatgc aacaataata
    11701 tgatagttat ataccggaat caaaaacgaa gctaacgcta tcgaagctcc tatccaccaa
    11761 cttactatta gtaattgaag actaatttta gtaactaatt ttatcaacct ctcagatcct
    11821 cgtcaaatcc gctaaaataa cctaagattt taccgcattt tgcacactta taatattcac
    11881 tgaaatcaaa attattgtat aatctaaatg agaatgaatc actatgtgaa caaaataatc
    11941 ttctaagtag ttgtattata gcattcaata atacgatcct aatgtcagta gtataatata
    12001 ttattaatta atgccgtcgg tgagatttta gctcacgaca gctcggtctt cagcttcacc
    12061 ctcgtgatta ccataacgag tcgagtgctc tcccaggctg agctacgacg gcatttaaat
    12121 aactaaatta atttcatcaa tatataattc tattttgatt cacgaatttt ctgttttata
    12181 taaaatttat atcgttgaat attcatataa aatcaaattt ataatatttc tataaaaata
    12241 aaagtaattt tattaataac ttttttaaca taactatata tctaaaacta aataaagatt
    12301 aaaaataatt tgctaggaga taaggaaagt gaataattca gttaattctg aatccaatca
    12361 ggtta
//
LOCUS       DATIAS010000293         2699 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_597623, whole genome shotgun sequence.
ACCESSION   DATIAS010000293 DATIAS010000000
VERSION     DATIAS010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_597623"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VLA74_05840"
     CDS             complement(<1..981)
                     /locus_tag="VLA74_05840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50266.1"
                     /translation="MFLLKSLMTTFLIATLIMSTIGNSLAHTFTNNESAVFLALIDNM
                     KIQASLIQQSISSGNIDIAKQHIDKLKELYSNHTNEEIAEKNERIANEISTTINYFTS
                     SSNQNNFSQSQIDKNVQDLNAILDESISVRIPQDVLNNSTVQALHFVELVNAVDMNYN
                     NTLVEQEIQNMSLTNNNQSRSQIEDVTSYNTARDLLNVAIDLYESKLKKDGLVASKNQ
                     SATIDKLQEGIEQLKTSIELKKPSSEITNTINGTVYPALQELYNFKLGEEEAGHTEEE
                     EHSEASTTVRDSVTVLLQDRIIPATDFIHLYDSTPYHIMNGHVALKAPCED"
     gene            1546..2142
                     /locus_tag="VLA74_05845"
     CDS             1546..2142
                     /locus_tag="VLA74_05845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50267.1"
                     /translation="MTNRILVYSVSTFAVILLFATFLFHSSFVYGQTATTGQNTFSAK
                     GAIDSLVVKDGGQQIPMQFNEQTSYILDGNWKLQVVNGNVTDFGTWFTMVHFDGTNRH
                     SMAFINFKQDNSTAGAIQIQPDGTATIQGIVDVLEGKEVKWSNVNTQLSINKYNTINI
                     SVDNQQTDEHFNGQPVRGIVDAFLYGFMDDKMKHDDKK"
     gene            2245..>2699
                     /locus_tag="VLA74_05850"
     CDS             2245..>2699
                     /locus_tag="VLA74_05850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50268.1"
                     /translation="MMSKTNLSIICLIIILVVSSFSFGIQSIYAHKEIKVGNYTIEAG
                     WEEEPPLLNLLNKIVVYVFENDSAVRNALKDLSISINYGGLSKELTFVPSEESAGLYL
                     ADMIPSQLGTYSLNLKGAIGKQSVNNDIQIEDIEDVNKITFPIVSGDSGA"
BASE COUNT          926 a          361 c          426 g          986 t
ORIGIN      
        1 gtcttcacag ggagctttta aagcaacatg tccattcatt atatgatatg gtgtagaatc
       61 ataaagatgt atgaaatctg ttgctggaat aattctatcc tgtaataata ctgtaactga
      121 atctcttact gttgtacttg cttcactatg ttcttcttct tctgtatgtc cagcctcttc
      181 ttctcctagt ttaaagttat ataactcctg caatgctgga taaacagttc cattaatagt
      241 attagttatt tcactagaag gttttttcaa ttctatagat gttttaagtt gctctattcc
      301 ttcctgtaat ttatcaattg ttgcagattg gtttttacta gcaactaatc catctttctt
      361 taattttgat tcatacaaat ctattgcaac attcaataga tctcttgctg tattataaga
      421 ggtgacgtct tcgatttgag atctagattg attattatta gttaatgaca tattttgaat
      481 ttcttgttct actagagtat tgttataatt catatctact gcattgacta attcaacaaa
      541 atgcagagct tgtactgtgg agttatttaa aacatcttga ggaattctta cagatataga
      601 ttcatccaaa attgcattaa gatcctgtac atttttatca atttgagatt gagaaaaatt
      661 attttgattt gaagatgacg taaaataatt tattgttgta gatatttcat tggcaattct
      721 ctcatttttc tctgctattt cttcatttgt atgattacta taaagttctt ttagtttatc
      781 aatgtgttgt tttgctatat ctatatttcc tgaagagata gattgttgaa ttaaacttgc
      841 ttgaattttc atattatcta ttaaagccaa aaagacagca ctttcattgt ttgtaaaagt
      901 atgtgcaagt gaattaccga tagttgacat tatgagagta gctattaaaa atgtagtcat
      961 taatgattta agtaaaaaca tcgtcttaat aggtacaaac atctatttta gaattatggt
     1021 acaacgctag aattaatagt gattttattt acacaatact actagtcttc atttttattt
     1081 atttatagga aaagaggata taattaatta tgaataacaa aaatttaaga ctaagactaa
     1141 gatttaattt tacaaaaata gtcttttgta gattatatta tgcattagtc gagtaaaaat
     1201 agaataaaca agtctactca actaatacac ctcttttggg gttaagattt gtctggcgct
     1261 aactatttag tgatcatcat attggagtag gtgctatacc aatacaacaa gtgaatagca
     1321 aagatggaaa gtaataaagt ttgtggagta ttagtagaat gcttttaaca atcttctttg
     1381 actttttact gtttgattgc atattactcc taaatataat atgtagatgt ttaaagaatc
     1441 aaataaggaa tgagcttgaa ttataattta gtctttctat actttgtaga aacattcgat
     1501 ggatgaacta gaattctttt atagtaatta aattactata atttaatgac aaacagaatt
     1561 ttagtatatt ctgtatctac atttgctgtc attttattat ttgcgacttt cttgttccat
     1621 tcttcattcg tatatgggca gacggcaaca actggtcaga atacattttc tgcaaaagga
     1681 gcgatagatt ctttagtagt aaaagatggt ggacaacaaa taccaatgca atttaatgaa
     1741 caaacaagtt atattcttga tggtaattgg aagttacaag tagttaatgg aaatgttact
     1801 gattttggta catggttcac aatggttcat tttgatggaa caaatcgtca ttcgatggct
     1861 tttatcaatt ttaagcaaga taattcaaca gcaggtgcaa ttcaaataca acctgatggt
     1921 acagcaacaa tacaaggtat agttgatgtc cttgaaggaa aagaagtcaa gtggtctaat
     1981 gtaaatactc aattatcaat aaacaaatac aatacaataa acataagtgt agataatcaa
     2041 cagaccgatg aacactttaa tggtcaacca gtgagaggca ttgtagatgc atttttgtat
     2101 ggatttatgg acgataaaat gaagcatgac gacaaaaaat aaaataaatt tacacccata
     2161 ttcttttcat tttcactgat attacaataa aaagttattt attgtaaatt ttagccttcg
     2221 ataaaattta atagatagta taccatgatg agtaagacaa atctttcaat tatttgtttg
     2281 ataataatac ttgtcgtatc ttcttttagt tttggtattc aatcgattta tgctcataag
     2341 gaaattaaag taggtaacta cacaatagag gcaggctggg aagaagaacc cccattatta
     2401 aatttgttaa ataaaatagt tgtatatgta tttgaaaatg attcggcagt tagaaatgcc
     2461 ctaaaagatc tttcaataag tatcaattat ggtggactca gtaaagaatt aacttttgtc
     2521 ccttctgaag agagtgctgg actttatttg gcagatatga ttccttcaca attaggaact
     2581 tattctctta atctaaaagg agcaatagga aaacagagcg taaacaatga catccaaatt
     2641 gaagatatag aagatgtaaa taaaattact ttccccattg tttctggaga ttctggagc
//
LOCUS       DATIAS010000294         2026 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_733482, whole genome shotgun sequence.
ACCESSION   DATIAS010000294 DATIAS010000000
VERSION     DATIAS010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733482"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..325)
                     /locus_tag="VLA74_05855"
     CDS             complement(65..325)
                     /locus_tag="VLA74_05855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50269.1"
                     /translation="MSRDSNTIYNPEDIIKKEARGLGDDADFGEVQEVGIEYIVTQKG
                     ILDKDKYYIPKNLVDRFDDGIVYFRVTAEQAKQYKEHETNLI"
     gene            complement(705..1298)
                     /locus_tag="VLA74_05860"
     CDS             complement(705..1298)
                     /locus_tag="VLA74_05860"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSF50270.1"
                     /translation="MPIVKTAIESDESGVIDALKLAFVADPATRWVWPDPQKYLSHFS
                     SFAKAFGGKAFVYNSAHYVENYSGAALWLPPNVYPDVDQLIALLQSSGSENAKKDGPA
                     VFEKMSMYHPNEPHWYLPLLGVDPLYHGKGLGSALMQHAIIVCDLDKNFAYLESSNPK
                     NIPFYERHGFELLGKIQINTSPPIFPMLRKPRKLRHN"
     gene            1488..1913
                     /locus_tag="VLA74_05865"
     CDS             1488..1913
                     /locus_tag="VLA74_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50271.1"
                     /translation="MEITQTKINEFYNIVQEQISKITIKDGLDINNLVKNIMTDLDYL
                     ISYETYESQKCYVHYGRDSMEIRMWIFSLICMSWTLMNLTNKVKEGHCLNIDHQHGDQ
                     NPRECFDGRKFHYSIYQKCIKSFYDSLAIIEKDLDKYRF"
BASE COUNT          710 a          313 c          311 g          692 t
ORIGIN      
        1 tgaaatatta tctttatgga aaatgcaaca tatcttttta tacatcagtc agatgcacag
       61 gttattaaat caagtttgtc tcatgctctt tgtactgttt tgcttgttct gctgttactc
      121 taaaatagac tataccatca tcaaatcggt ctaccaaatt ctttggaata tagtatttgt
      181 ctttatctaa aattcccttt tgtgttacta tatattctat accgacttct tgtacttcac
      241 caaaatctgc atcatcacct agtcctcttg cttctttttt aataatatct tctggattgt
      301 agatagtatt agaatctctt gacatataat aattaggtat acatatttta tataactaaa
      361 aaatgttcac cttcaattag ttttaaaaga aataaaaata agaggaaata aaaaacagat
      421 aactcactca cttctctctc tcaagcttta ttgaatatat tttagctctc aataacttga
      481 aagaaagaaa tggacctaac aatgaaaaat aatgaacctt agaaaatatg ggcccgtcgg
      541 gagttgaata gtcatggttt cagtgttcaa tcgctattta aattaaatat agttatcgtt
      601 aactttaaga aatgtttaac taaagagata gtaggtttat gtggaatata tttatgaaag
      661 cgatattatg atcccatgcc tatacttgaa tttctggtta ggaattaatt atgtcgtaac
      721 ttacgtggtt tacgcaacat tggaaagatt ggtggtgatg tgtttatctg aattttgcca
      781 agcaattcaa atccatgtcg ttcgtagaac ggaatattct ttggattaga tgattcgaga
      841 taggcaaaat ttttatcaag atcacataca attattgcat gctgcattaa tgcagagccg
      901 agtcctttcc cgtgataaag tggatcaact ccaagaagtg gcaaatacca atgtggctca
      961 tttggatgat acatactcat tttctcaaat actgctggac cgtctttctt ggcattttca
     1021 gatccactac tttgtagcaa tgcgatcaat tggtctacat cagggtaaac gtttggagga
     1081 agccaaagag ctgcaccaga atagttttca acgtagtgag cactattgta tacaaatgct
     1141 tttcctccaa aagccttggc aaaactagag aaatgtgaaa gatatttctg cggatccggc
     1201 catacccaac gtgtagcagg atcagctaca aaggctagct ttagcgcatc aataacacca
     1261 ctttcatctg attctatagc agttttaaca attggcaatg tctcaaacta tccctcattt
     1321 tctattatag catgaatatc ttaaaggttt ttacaataag ataattaagt actgattatt
     1381 tgtaaataac attgactaaa tgtttaaaat aatttttgct ttatgaataa caccatacta
     1441 aataattatt tactcttatt aatataattc cttaatacaa taaaaatatg gaaattactc
     1501 aaacaaagat aaatgaattt tataatatag ttcaagagca aattagcaaa ataactataa
     1561 aagatggatt agatattaat aatcttgtaa agaatataat gacagattta gactatctta
     1621 tatcttatga aacttatgaa tcccaaaaat gctatgttca ctacggtagg gatagtatgg
     1681 agataagaat gtggattttt agtctaatat gtatgtcttg gacactaatg aatctaacaa
     1741 ataaagttaa agaaggacat tgtcttaata tagatcatca acatggagat caaaatccac
     1801 gtgaatgttt tgacggaaga aaattccatt attctattta tcaaaaatgt attaaatctt
     1861 tctatgacag tttagcaatt atagaaaaag acttagacaa atatcggttc taataatcca
     1921 agtgtaaagt aatagtatgt tataggtagt agttataaag ctgaattaat gcttttatac
     1981 cacttagcat atgttagctg acaccttcta acaagtagtt cctcat
//
LOCUS       DATIAS010000295         2023 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_733497, whole genome shotgun sequence.
ACCESSION   DATIAS010000295 DATIAS010000000
VERSION     DATIAS010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733497"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..>2023
                     /locus_tag="VLA74_05870"
     CDS             60..>2023
                     /locus_tag="VLA74_05870"
                     /inference="COORDINATES: protein motif:HMM:NF045198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSF50272.1"
                     /translation="MSTNEDIVNDYDKSVVKIVTADGMNVGTGFIVTDDGIICTCYHV
                     IGDLQEQELYKDIKIYFPNTKQTVPATILLKDQKEKKEVCADPINDIAFLRISKEDQD
                     KIKSNGQELVPLPLSKSIVFGHEFISRGFRKDDEFPDGLGSSGEIRTLTRYKVDSGID
                     IPIVQLHVQDIEEGMSGSPVLDMKRNKVIGMIDRTYDKEDRTDQNLVMAIPVESLIKT
                     YEDLSDKNPGLILINQFLDHIKSAKNIKYRNFDDVYVPPKEYPKIQEALKLKKCVFIT
                     GFPEYGKTFTAIKLMWDEWKNSNKAITCHFPKTLEDKNKILQNIKAGNDNETYSNSII
                     YIEDPTGMTESDYKLNTVFRDSIISAIEQLPSLKSCLIVTMRENIYQRTKRDMKAGEE
                     AGLENYIQRLEIGSPSYDYDSRKEILLRWANQMKCEWLNKKNLLKIVLEELKNQKLPT
                     PYNIYTFTNSTGLSHENYGINDEINLKKIIHKYSQNTAQTFATNIRDINKDEDYKILF
                     ACFPFISNEYPKVYVERKFNEIMNDINPTEQDYNRRKFSAAVNYHHGTIDSSTRIQFV
                     HPSLSEALPLILIRNDGLPDQHIQNLFSKVLVYVAYDVINLKTICSFILKNYKNLLNK
                     EVKNLLPKVMDSKDFKYGIFNEVFANFDKI"
BASE COUNT          815 a          287 c          334 g          587 t
ORIGIN      
        1 gtaatagtat acaatcgaat ggatgagttt aatttgattc tctatatttt gtaagaaaaa
       61 tgtcgaccaa tgaagatata gtcaacgatt atgacaagag tgtagttaaa atagtaaccg
      121 ctgatggtat gaatgtaggt actggtttta tagtcacaga cgatggaata atttgtactt
      181 gctatcatgt aattggggac ctacaagagc aagaacttta taaggacatt aaaatttatt
      241 ttcctaatac aaaacaaaca gtacctgcta ctattttatt aaaagatcag aaggaaaaaa
      301 aagaagtatg tgccgatcca ataaatgata ttgcattttt gcgaatatca aaagaagatc
      361 aagataaaat aaaaagtaat ggacaagaac tagttccatt accgctaagt aaatctattg
      421 tatttggaca cgaatttata tcgagaggat ttagaaagga cgatgaattt ccagatggtc
      481 tcggatcaag cggagaaatt cgaactttaa cgcgttataa ggtcgatagc ggtattgata
      541 ttcccatcgt tcaacttcac gtacaagata tagaagaagg aatgagcggt agccctgttc
      601 ttgatatgaa gaggaacaag gtaataggga tgatagatag aacatatgat aaggaagata
      661 gaaccgacca aaatcttgtt atggcgattc ctgttgaatc cttaattaaa acatacgaag
      721 atttatcaga taaaaatcca ggactgattc tcattaatca gttcttggac catattaaat
      781 ctgcaaaaaa tataaaatat agaaattttg atgatgtata tgttcctcca aaagaatatc
      841 caaagataca agaagcactg aaactaaaaa aatgtgtatt tattacagga tttccggaat
      901 atggaaagac atttaccgca ataaaactaa tgtgggatga gtggaagaat tctaataaag
      961 caattacatg tcattttcct aaaacattag aagataaaaa taagattttg caaaatatca
     1021 aggcgggaaa tgataatgaa acctattcta attcaataat ttatatagaa gatccaacag
     1081 gaatgacaga atcagattac aagttaaata ctgtattcag agattccatt ataagtgcaa
     1141 ttgaacaact tccttcactt aaatcctgcc ttatagtaac gatgagagaa aacatctatc
     1201 aaaggactaa gagagatatg aaagcaggag aagaagcagg actagaaaat tatattcaaa
     1261 gacttgaaat aggatcacct tcttatgatt atgactcaag aaaagagata cttttaagat
     1321 gggcaaatca aatgaaatgt gaatggttaa acaaaaaaaa tcttcttaag atcgtactag
     1381 aagagctaaa aaatcaaaag ttacctactc cgtacaacat atacaccttt acaaattcaa
     1441 ccggattaag ccatgaaaat tatggtatta atgacgaaat taatttaaaa aaaataattc
     1501 acaaatactc tcaaaatacc gcccaaacat ttgcaaccaa tatacgagat ataaataaag
     1561 atgaagatta caaaatactc tttgcatgtt ttccttttat ttcaaatgaa tatccaaaag
     1621 tgtacgtgga aagaaaattt aatgagataa tgaatgatat aaaccccact gagcaggact
     1681 ataatagacg taagttttca gcagcagtta attaccatca tggtacaata gattcttcca
     1741 ctagaattca atttgtacat ccttctctat ctgaagctct tccacttatt ttaataagga
     1801 atgatggctt acccgaccaa catattcaaa atttattttc aaaagttctc gtatatgttg
     1861 cctacgatgt aattaattta aagactatat gttcgtttat tcttaaaaat tataaaaatc
     1921 tactaaataa agaggtaaaa aatttattgc caaaagttat ggacagcaag gatttcaaat
     1981 atggaatttt caatgaggta tttgcaaatt ttgacaaaat aga
//
LOCUS       DATIAS010000296         3036 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1687425, whole genome shotgun sequence.
ACCESSION   DATIAS010000296 DATIAS010000000
VERSION     DATIAS010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1687425"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(592..1371)
                     /locus_tag="VLA74_05875"
     CDS             complement(592..1371)
                     /locus_tag="VLA74_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50273.1"
                     /translation="MNIIPFVIRTKKLNLSIYIFTILLGFSLLTFESNEVFGVELFSK
                     DDKPFGVSYDEWISKYWNWWVSQSIEEATPVQGGCIIDKSDSIVMLMETTVGGTHNQE
                     CEISSNQGILIPLWIAWCDSGTDKEYPIAELSKCAREKYNLGNIKSEVKIDGQPLAKL
                     DVRMSLMEGSLDYKINSLSNVSEIYVKAFNLTAPEDTHKAFTVPGTFHAGAHGWFVFL
                     KPLPLGDHTVFYNVRVTPTGALTSPGTTANFADITYLFHVK"
     gene            1519..2871
                     /locus_tag="VLA74_05880"
     CDS             1519..2871
                     /locus_tag="VLA74_05880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50274.1"
                     /translation="MRNLTTFFSSGLTKKNSLILILTFTVIVILDLTVVKFASYTGQQ
                     LPTSWNVQIFIAFSFVFSIISILFLYMTRKTSESVYTLPINIKYLREFFFFSQTTTIS
                     IISIIILQMILSNKYNIILVRAETYLAYISTLIFLIFLVFLFIGWFKSKRNYIVMLFT
                     ISFSLLIINLVISLIYLDSYFSSSVKQTIQPYQITSFVTNFGGSSFHQQIAFTHDMLS
                     ILSFSFMWIATAILLSHYRHKIGKIKYFILVSIPLIYYLFPFEGYFGNIFFSLILDYP
                     ITFAIIYILIFSATKQIGALFFSIFFLIASTLVAKGKVRQSILFSAIGMVIIFGSLDI
                     ATLQYSVYPPFGLITIAFMPLGSYLLFIGILSSAQNISRNIQIRKELYKSANSQFDLL
                     KIIGMAQMEKELLKRYKSISKYTSIQEEEVYQLEQDEIKEIVHDVVNELLTTKKIRKS
                     "
BASE COUNT         1030 a          459 c          375 g         1172 t
ORIGIN      
        1 ttaatttata gttagaaata ttgaattcga ttgttttagt aaattatttt ctaatcaatt
       61 attttacaat tttgtacaag tttttgtttc tttaatgttt gaactacaaa attgtgtcaa
      121 aatcagttca cacatctccg agcccgtata ctagtagggc tcaataacat ttaacaaact
      181 aatttttctt ttctaaaaga tgtaaacttc actatctaaa tagataaata tttaaataat
      241 ttctccactt ttttcaaaag ttttgaaggt tttgaaaaaa cttgtaatct ataattgatt
      301 tctttaagaa aactaaagta tttctcttga aaatttgtta taaactttat tttcttaaag
      361 tcagagaatt tggcttatcc ttataataaa gaagatgtat tcaactctta ctactaaagt
      421 caacaatctt atgctaatat agtagattca gaaattttta gatgaatttt ataataatat
      481 aataaaatgt aaaaactaga tttgctattg tattataatt catactaatt taatgaaaaa
      541 aatttttctt atcctccatt tgaagattaa ataactaaat aaaaattata attatttcac
      601 atggaataga tatgtaatat cagcaaaatt tgctgtagtg ccgggggaag taagggcacc
      661 agttggagtt actctcacat tgtaaaatac agtatgatct ccaagaggca aaggttttag
      721 aaaaacaaac catccatgtg caccagcatg aaatgttcca gggacagtaa atgctttatg
      781 tgtatcctct ggtgcagtaa gattaaatgc ttttacgtat atttcactaa cattagataa
      841 agaatttatt ttataatcta atgatccttc cattaatgac attcttacat ctaatttagc
      901 caaaggctgc ccatcaattt taacttcaga ttttatattt cccaagttat atttttcccg
      961 agcgcatttt gacaattctg ctattggata ctctttatca gttccactgt cacaccatgc
     1021 aatccataat ggtattaaga taccttgatt agaagatatt tcacattcct ggttatgagt
     1081 tcctcctact gttgtttcca ttagcataac aatagaatct gatttgtcta ttatacatcc
     1141 tccttgaact ggagttgctt cttctataga ctgtgagacc caccagttcc aatactttga
     1201 gatccattca tcataagaaa ctccaaatgg cttatcatct tttgaaaata attctacgcc
     1261 aaacacctca ttagattcaa aagttaagag agaaaatcct aataagattg taaaaatata
     1321 aattgataaa ttcaatttct ttgttctaat tacaaaagga atgatattca tattacaaat
     1381 actataaaga caattcttaa tcttttcgat attatttcaa taataattta gcatgtaaac
     1441 tgcaaattct gttagtaaaa tttttttaaa aggttatagc ctaaattagt caatgcttta
     1501 gacaaggata tagtcataat gagaaacctt actacgtttt tctcctctgg tttaacaaaa
     1561 aagaattcac tcattctcat tttgactttt acagtaattg tgattcttga tttaacagtt
     1621 gttaaatttg cttcctatac gggtcagcaa cttccaacat catggaatgt tcaaatcttt
     1681 attgcttttt cgtttgtatt ctcaataatt tctattttat ttttgtatat gactagaaaa
     1741 acttctgaat ctgtttatac attgccaata aatatcaaat atcttcgtga attttttttc
     1801 ttcagtcaaa ctacaacaat atccatcata tcaataataa ttctacaaat gattctttca
     1861 aataaatata atatcatatt agttcgtgct gaaacttatc tggcgtatat atcaacatta
     1921 atttttttaa ttttcctagt ttttcttttt ataggatggt tcaaatcaaa aagaaattac
     1981 atagtcatgc tatttactat atcattctca cttttgatca tcaacttagt tatatctctt
     2041 atttaccttg actcttattt ttctagttca gtcaagcaga ctatacaacc atatcagatt
     2101 acatcatttg tgacaaactt tggtggctct tcttttcatc aacaaattgc ttttactcat
     2161 gatatgcttt ctatattgtc attttctttt atgtggatag ccacggctat acttttaagt
     2221 cactataggc ataagattgg taaaataaaa tattttatat tagtatccat acctttaatc
     2281 tattatctat ttccttttga aggttatttt ggtaacatat tcttttcact tatactagat
     2341 tatccaatta cttttgccat tatctatatt ttaattttta gtgcaacaaa acagataggt
     2401 gctttatttt ttagtatatt tttcttgatt gcttctactt tagttgcaaa aggtaaagtt
     2461 cgacagtcta tattattttc tgctataggc atggtaatta tctttggctc tctagatata
     2521 gcaacattac aatattctgt ttatccaccc tttggtttaa taactatagc atttatgcca
     2581 cttggatcat atttgttatt tatcggaatt ttgtcatctg cacagaatat atcaagaaac
     2641 atccagataa gaaaggaatt atataaaagt gcaaatagcc aatttgatct tcttaaaata
     2701 attgggatgg cacaaatgga aaaagaactt ttaaaaagat acaaatctat ttctaaatat
     2761 actagcatac aagaagaaga agtatatcag ttggagcaag atgaaataaa agaaatagtg
     2821 catgatgtag tgaatgaact tttaactact aaaaaaatcc gaaaatcata ataaatgatt
     2881 tttactatgt ttatctatta ggtgaaacat ttttgattat ttttatcatg aactatcctc
     2941 ctattcaaga aatattcgag ttagttcctt tggcattttc tgattggatt attgttctat
     3001 tattggctac tactggtttg atatattcag agacaa
//
LOCUS       DATIAS010000297        11853 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1416421, whole genome shotgun sequence.
ACCESSION   DATIAS010000297 DATIAS010000000
VERSION     DATIAS010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 11853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11853
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1416421"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(574..2916)
                     /locus_tag="VLA74_05885"
     CDS             complement(574..2916)
                     /locus_tag="VLA74_05885"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSF50275.1"
                     /translation="MSDSRDRESRSEQFPSEPHLIRSLSLLDVIMVGIAAMIGGSIFV
                     LTGSAIGLAGSAVIVAFIANAIITLFTAMAYAELGSAMPEAGGGYLWVREGLPRPNAF
                     ISGWMAWFAHIVAGSLYAVSFASFVTGLLRSSNYEIYSLFGFLPVDKLIAVLSIVAFT
                     YLNIKGTSETGKVGVIVTIVQLCLIFLFIGLGIWIMFNNPDWTINFVDFVPLGITGII
                     AAMGLTFIAFEGYEVIVQTGEEVKNPKKNIPRAIFISLTAVVVLYCLIAFVSIGSIFP
                     EEVSSWKFIGDYGELGIMKAAELIIPYGAFIILAGGMISTLAALNATTFSSARVAFAM
                     GRHYNLPHKFSSIHKKNKTPYIAILLSGIIMAIMAYTFPLDQIAIAAGVIFLLLFVQV
                     NMAVINIRRIYGDKLNYGFKMPFFPFLSIIGISLDIGLAIYLLITAPMSWIITLIWVA
                     LGFGVYRLYTFRKEIDHYAPIITSEGDLTRTDFRILIPYTPENPDRLIRYAINIAKAN
                     NGEINVLRTITVPHQTPLSAGVAFSERAKKSFEPLEKIIEEENIMNHYLVRISHDTNE
                     SILATIQEQKIDLMIIDYETLRSSKKLQALVTCDVLAIQTTGQDHFLLDTQNIDRDSK
                     IQKKYNLVVIDDHRHDSDVIFKTIRWLETSKSFNINILSLRNKKINSDIEEDLHFIKP
                     KKLEYLNDVKFESNEIYLSEEVEDNAEKLSDLILSAINASQPDLIITSSVIGKFNFFN
                     NSYLLVLLDQLNCPVIVTKDFTIPVVHSAKFWLGKIFHNR"
     gene            3060..3725
                     /locus_tag="VLA74_05890"
     CDS             3060..3725
                     /locus_tag="VLA74_05890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50276.1"
                     /translation="MNNQIVVATLDGRSYYKIIKFLKSLRLSYKELSPLEAINSNTKI
                     IITSQKESAIFKKKNIIIDSELSENPLIIKAKILRNLMKPYMYDQLIIGIDPGKRIGI
                     SIFYLYDEIESIVLTCIGCVLDLISKILAGITARRKIVRIGDGNISMANSIAIHIKTK
                     FNFVDVEIVDEHGTSSHMNAERNRRIIKDKSSARLIAFRNGKIFDPELKSLKKEHNKI
                     VKI"
     gene            4010..4369
                     /locus_tag="VLA74_05895"
     CDS             4010..4369
                     /locus_tag="VLA74_05895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50277.1"
                     /translation="MKNIEKLVSNTILLDEKRKMHIKMLFFDNGCFIILSENSHRIGS
                     MTIASSLANNVTKSQIIPSRFDSLFIDSMAQRISLMLNGICLVSLHTKNPLNIEDMKI
                     ITGEILNIVSERTKEDA"
     gene            4344..5750
                     /locus_tag="VLA74_05900"
     CDS             4344..5750
                     /locus_tag="VLA74_05900"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSF50278.1"
                     /translation="MKEQKKMHENNGKKNKKNIDLNSFIEILEKEKEIIRIRKKVNTR
                     FELAALVSKVDGGKAIIFENVEEKKIPVISNLLGTRKRFALALGVNNEKEIHNIINKS
                     INKINNKTKITSDVPYYQNSNTNLSILPIITHFEKDAGPYITSSIVYAKDQENGNQNS
                     STHRLLKLDDKHLVIRMVEGRHLHKCFINAKEHGEDLKVAIVIGVHPAVNIAAAYQAS
                     YGIDEMFIANTLLNGNLHLAMNNYSHLLIPASSEIVLEGRILKDKTHEEWMVEMLKTY
                     DFKRQQPVFELEKIRFRDNAIFHDILPGFLEHRLLMGLPVESKIFDQVRNIIPNTLQI
                     CLTDGGCNWLTAVIQIRKRLEGEPKNALITAFSSHLSLKIAIVVDHDINPSNPTEVEY
                     AISTRFQADKGLLIIQNAKGSSLDPSSDQQNLLTTKIGIDATASLLKPNEGFEIAHIP
                     GEKNIKLSDYLKEQVYRK"
     gene            5883..6203
                     /locus_tag="VLA74_05905"
     CDS             5883..6203
                     /locus_tag="VLA74_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50279.1"
                     /translation="MKPNSFAMKDWHLEHVEKVIVRYVRGLSPNATSFEKRNFKKYST
                     MSNCAKQIEYDKKHGVTKEEVMAVMQKIRTDESFSELLKNPDSVQRLDELEKQLATPK
                     KLSW"
     gene            6309..7031
                     /locus_tag="VLA74_05910"
     CDS             6309..7031
                     /locus_tag="VLA74_05910"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HSF50280.1"
                     /translation="MNGDIKILGVITASSIIILTLLTLNQNQVADNNGHAIGFIDIFG
                     QDDKLPVVKNSQILPFSGQNYADVKNSETINLNSFTVSTWFNTDMNATEKETFLINKG
                     GTGSDKSGSNLNYGIFLTNREKVRGGFETSLGDDYLVTSQSSYNDGQWHSTILTFDEK
                     SHILKLYMDGIEVATNSTKIGVKPDSTGKQPIRLGANSLAEKGKITGNYTGQLDDIQV
                     WNFAFTNDEVLDLFKKESQIQR"
     gene            complement(7122..7685)
                     /locus_tag="VLA74_05915"
     CDS             complement(7122..7685)
                     /locus_tag="VLA74_05915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50281.1"
                     /translation="MSETRFTDGNLIILYSIHQNPSSSELPSHVLERINLCERMYHVI
                     VRSKPDAHKTIILVTADSLYSGLLKNELINRGIDEKIIKIDSESKKVSQCLNSLDEFL
                     KKRVNPPYVYFIGSVWMKDVFDSIVKSNFQQYRMQFEGALDHRPVEEVEKDKSLEKPI
                     KGTEYFKGKIKNKALDMLLNYIFPEDK"
     gene            7814..8152
                     /locus_tag="VLA74_05920"
     CDS             7814..8152
                     /locus_tag="VLA74_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannose isomerase type II C-terminal
                     cupin domain"
                     /protein_id="HSF50282.1"
                     /translation="MDIYTENRPWGKFEKFHENIPSTVKLIYVNANSRLSLQYHQHRR
                     EFWKIIKGSAVIEIDGKELKLKENETINIPLGARHRIKALEDCIILEISYGNFDEDDI
                     VRIEDDYNRV"
     gene            complement(8173..8514)
                     /locus_tag="VLA74_05925"
     CDS             complement(8173..8514)
                     /locus_tag="VLA74_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50283.1"
                     /translation="MHKLSKGWIQIEGHYSSEELKSLKRIIFPIDYDPTIMFWIVNTK
                     GAWGARSAIIPLLMEIIKGIFKFDHYTDDKYFNYSPCSYDQNSSSCFDTITTMKRIMS
                     VFKKSGKFPFS"
     gene            8679..8966
                     /locus_tag="VLA74_05930"
     CDS             8679..8966
                     /locus_tag="VLA74_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF504 domain-containing protein"
                     /protein_id="HSF50284.1"
                     /translation="MGKRKGKIEQIFSKAIYSDNPELYIILYRDFNTIISVTLPRFME
                     ISENLQLIPITRIVQIRKGNEILYQKFNYLKEFLGSKDKHNFNSMKANDNY"
     gene            8993..9559
                     /locus_tag="VLA74_05935"
     CDS             8993..9559
                     /locus_tag="VLA74_05935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50285.1"
                     /translation="MIDRINKKIIYSVIGVIVVIGISIFFLQQFEFPSIPKLDFKPEF
                     NQGALSEARQLEISLNNLSFTRINNNDINIKTAFNVYNPNMGTLLLENINYNILLDNI
                     RISSGDIGKKPEGFVASQENIYPIIGNSTVILKDDKTISKDNRIAEVWNKIMDEKSKF
                     QIHGNFAYKQTSSFQATAGEIEFQLNYP"
     gene            9626..9743
                     /locus_tag="VLA74_05940"
     tRNA            join(9626..9664,9686..9700,9724..9743)
                     /locus_tag="VLA74_05940"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9661..9663,aa:Gly,seq:tcc)
     gene            9831..10037
                     /locus_tag="VLA74_05945"
     CDS             9831..10037
                     /locus_tag="VLA74_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50286.1"
                     /translation="MSSSSSSSCSVKLSTIVDNKIGLVPNKENSSIIYDFYKYMQEKG
                     SSDNHQVNNPKVVIDFANFLGLFR"
     gene            10136..10276
                     /locus_tag="VLA74_05950"
     CDS             10136..10276
                     /locus_tag="VLA74_05950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50287.1"
                     /translation="MKSQVQITLFSAVILDDPEKTFHPPREKIHQFFTDFDNHPSPNI
                     IA"
     gene            10431..10646
                     /locus_tag="VLA74_05955"
     CDS             10431..10646
                     /locus_tag="VLA74_05955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50288.1"
                     /translation="MAKRYWILAIISVFILIMAYASSITLPYGLDLYANLVWMAFFFG
                     MLLVSIGAGIQVRALEKKIKEMNKTTK"
     gene            complement(10723..11352)
                     /locus_tag="VLA74_05960"
     CDS             complement(10723..11352)
                     /locus_tag="VLA74_05960"
                     /inference="COORDINATES: protein motif:HMM:NF016850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmcI family methyltransferase"
                     /protein_id="HSF50289.1"
                     /translation="MDVLSEIEEIAKKNSLPSIGPIKGKIIGKVIKRYKPKTILEIGT
                     LHGYSAILMANFVLKTHADDYYHYDGNDTPPKEIIVTCLEIDKNLTKIAKKNIERAGL
                     SDRIDVITGDAIKVIPMLDNNHYKFDFVFLDAEKNQYFFYLKLLEENNLLKKKAIVVA
                     DNVLIYESEMKDYLDYVRNSGRYNSHTTETSLEFNKNVKDALEISIKQD"
     gene            complement(11673..>11853)
                     /locus_tag="VLA74_05965"
     CDS             complement(11673..>11853)
                     /locus_tag="VLA74_05965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50290.1"
                     /translation="LVNNFTSYLLNTSNLINNALASNMRVYNTALEQTRDNLKDLVRT
                     NTSYIKSVGQSVNRQ"
BASE COUNT         4405 a         1670 c         1800 g         3978 t
ORIGIN      
        1 gttcaggata gatgtaaatt tatcatcgta ggattcatgt gatttcatac atcaagatta
       61 ccttattaca atttaatcat acaaaaatat aagttgtttc aaagtatatt atcaaaagat
      121 tttatattta gattaatgaa atttttcatg atttcatggc taaaattaaa aatgaaagaa
      181 aattatataa taaagatgta aataatatca aaacaaagaa gcattcttga taatatcata
      241 tcaatcgaat gattttaata aatattattt cagaagaagg acggttgatt ttattttgta
      301 attatttgta tatgtcttcg aaactcgtct caaagaataa caatatatct tttatcagtt
      361 atcatatcta catgtgtgta aaacaggatt ttattcaagg aagaccagtg ttattaaatc
      421 tccttcttta gtcagtcacc agaatcttat aatactatta atctacatcc ttcttttggt
      481 aaatttccat ttatgatcat tttatctata tattcataga acttaagaca attattataa
      541 acatatctag atataaaaca attttatcta ctttcatcta ttatgaaaaa tttttcccaa
      601 ccagaatttt gcactatgaa ctacaggaat tgtaaaatct ttagtaacga tcacgggaca
      661 atttaattga tcaagtaaaa ccaagagata agaattatta aagaaattaa attttccgat
      721 tacagaactg gtaataataa gatctggttg agaggcattt attgctgata aaatcagatc
      781 agataatttt tctgcattat cttcgacctc ttcggataaa tagatctcgt ttgattcaaa
      841 tttaacatcg tttagatatt ccaatttttt gggctttata aaatgaagat cttcttcaat
      901 atccgagttg atttttttat ttcgtaatga taaaatatta atattaaaag atttagatgt
      961 ttctaaccat ctgattgttt tgaaaataac atctgaatcg tgtctatgat catctattac
     1021 tactagatta tatttttttt ggatttttga atctctgtca atattctggg tgtctaatag
     1081 aaaatgatcc tgaccagtag tttgaatagc caatacatca catgtcacca gagcttgaag
     1141 ttttttacta cttcgtagag tttcataatc aattatcata agatcaattt tttgttcttg
     1201 tattgtagct aatattgatt catttgtatc atgtgaaatt cgtactaaat aatgattcat
     1261 tatattttct tcttcaatta ttttttctag tggttcaaaa gatttttttg ctctttcaga
     1321 gaaggctaca cctgcagaaa gaggtgtctg gtgtggaaca gttatggtcc ttaatacatt
     1381 tatttctcca ttattggctt tggctatatt gatagcataa cgtattaatc gatctgggtt
     1441 ttctggtgta tatggaatta gaattctaaa atcagttcta gttagatctc cttcactagt
     1501 aattataggt gcgtaatgat ctatttcttt tctaaaagta tataaacgat agacaccaaa
     1561 tcctaacgcc acccaaatta atgttattat ccagctcata ggagcagtaa ttaataaata
     1621 aattgctaaa ccaatgtcaa gacttattcc aattatagat aaaaatggga aaaaaggcat
     1681 cttaaagcca taatttaatt tatctccata aattctacgt atattgatta cggccatatt
     1741 aacctgtaca aataatagca gaaaaattac accagcagca attgcaattt gatccaaagg
     1801 aaaagtatat gccataatgg ccataattat gcctgaaagt aaaattgcta tatagggtgt
     1861 cttatttttt ttatgtatag aactaaattt atgtggtaaa ttataatgac gccccattgc
     1921 aaaggctacc ctagcagagg aaaaagttgt cgcatttaaa gctgctaatg tagatatcat
     1981 tccgcctgcc agaataataa atgctccgta tggtattata agttcggcag ctttcattat
     2041 acctagttct ccataatcac ctatgaattt ccatgatgat acctcttctg gaaatataga
     2101 tcctattgat acaaaagcaa taagacagta taggactact acagcggtta atgagataaa
     2161 tattgccctt ggaatatttt tctttggatt ttttacttct tctccagttt gaactatgac
     2221 ttcatacccc tcaaatgcaa taaatgtcaa tcccatagct gcaatgatac cagtaatccc
     2281 tagtggcaca aagtcgacga aattaattgt ccaatcagga ttgttaaaca taatccagat
     2341 acccaatcct ataaatagaa atattaaaca aagttgaact attgtgacta taacaccgac
     2401 tttgccggtt tcagacgttc ccttaatatt aagatatgta aaagctacaa tagataatac
     2461 tgctattaat ttatctactg gaagaaatcc aaataaagaa taaatctcat aattagacga
     2521 tcttaataac cctgtaacaa atgaggcaaa gcttacagca tataggcttc ctgcaactat
     2581 atgcgcaaac caagccatcc atccacttat aaaggcattg ggtctaggaa gtccttctct
     2641 aacccagagg tatcctcctc cagcttcggg catagctgaa cccaattctg cataagccat
     2701 agccgtgaat aatgttatta tcgcgttagc aatgaaagca actatcactg cactacctgc
     2761 taatccgata gcagatcctg ttagaacgaa aatagatccg cctatcattg cagctattcc
     2821 aaccattata acatcaagaa gactcaaaga acggattaga tggggttctg atgggaactg
     2881 ttctgatcgt gattcacgat cacgagaatc tgacaatgta agtaagaacg ctataaaaaa
     2941 atgaattaat taaatgttta catatattag agttacagga aaatactatc ataaattaaa
     3001 taacttttaa taagtattta atacaattaa agtacgatga ataacccttt atgagggaaa
     3061 tgaataatca gattgttgtt gcaactcttg acggaagatc atattataaa attatcaagt
     3121 ttttaaaatc acttagatta agttataaag agttatcacc acttgaagcc attaattcca
     3181 atacaaaaat aataatcact tcacaaaaag aatcagccat atttaagaaa aagaacataa
     3241 taatagattc agaattaagt gaaaatcctc tcattataaa agccaaaatt ttaagaaatc
     3301 taatgaaacc ttatatgtac gaccagttga ttatagggat agatcctggt aagagaatag
     3361 gtatttcaat tttctattta tatgacgaaa ttgaaagtat tgtattaacg tgtattggat
     3421 gtgtattgga tttaatctcc aaaattttgg cagggattac tgcaaggaga aaaattgtaa
     3481 gaataggaga tggtaacata tcaatggcaa atagcattgc cattcatata aaaaccaaat
     3541 ttaatttcgt agatgtggaa atagtcgacg aacatggaac atcgtctcac atgaatgctg
     3601 aaagaaatag aagaataatc aaagataaat catcagcaag attaatagca ttccgtaatg
     3661 gtaaaatttt tgaccccgaa ttaaaaagtt taaaaaaaga acataataag atagttaaaa
     3721 tttgaaaagt aaaacaaaat ttaatatcga aattcaaaaa tcatccactt aaaaatggtt
     3781 gtagccttag aaattaataa aagttagtaa aaagcaactt atttagatgt tttaagaatt
     3841 aaataacatt taaaaagtgg ttatcaataa gaaaaagatt aatgataaaa cagatgtttt
     3901 atgattatcg tatctgcaaa aagtttatta tgtttacata tatcaaatac tctgaaaatc
     3961 aaattaagta aaatttcatt accacaaggg gataataagg cagatctaaa tgaaaaatat
     4021 agaaaaatta gtttcaaaca cgattttatt agacgaaaaa agaaagatgc atataaagat
     4081 gctttttttt gataatggat gttttattat attatcagaa aattctcaca gaataggttc
     4141 gatgacaatc gcatcaagtt tagcaaataa cgtgacgaaa tcacaaatta ttcctagcag
     4201 atttgactcg ttgtttattg attcaatggc tcaaagaata tcattgatgt taaatggaat
     4261 atgtctagta tcattacata ccaagaatcc attaaatatt gaggatatga aaataattac
     4321 gggagagata ttaaatatag taagtgaaag aacaaaagaa gatgcatgag aataatggta
     4381 aaaaaaataa aaaaaatata gatcttaaca gttttatcga aatacttgaa aaagaaaagg
     4441 agattatacg aataagaaaa aaagtcaata cgagatttga attagctgca ttagtttcaa
     4501 aggttgatgg cggaaaggca ataatctttg aaaatgtaga agagaaaaaa attcctgtaa
     4561 ttagtaatct gcttggaaca agaaagagat ttgctttagc tctaggtgta aataatgaaa
     4621 aagagattca taatatcatt aataaatcta taaataaaat aaacaataaa acaaaaataa
     4681 cgagtgatgt tccttattat caaaactcta atacaaacct atcaattctt ccaataatta
     4741 ctcattttga aaaagatgct ggaccatata tcacctcatc gatagtttat gcaaaggatc
     4801 aggaaaatgg aaatcagaat tcatcgacac acagattgct gaaattagat gataaacatt
     4861 tggtaataag aatggtagaa ggtagacatt tacataaatg ttttataaat gcaaaggaac
     4921 atggagaaga tttgaaagta gcaattgtaa taggagttca tccggctgta aatattgctg
     4981 cagcttatca agcatcttat ggaatagatg aaatgttcat agcaaatact ttgctaaatg
     5041 gtaatctaca cttagctatg aacaattact ctcacctttt gattcccgct tcgtcagaaa
     5101 tagttttaga aggtagaata ttaaaagata aaactcatga agaatggatg gtagaaatgt
     5161 tgaaaacata tgactttaaa agacaacaac cagtctttga attagagaaa atccggtttc
     5221 gagataatgc tatctttcac gatattcttc caggattttt ggaacatcgt ctattgatgg
     5281 gtttacctgt agaatcaaag atatttgatc aagttagaaa tataattcct aatactttac
     5341 agatctgttt aactgatggc ggttgtaatt ggttaacagc agtcatacaa attaggaaaa
     5401 gattagaagg agaaccaaaa aatgctttga ttacagcttt ttcatcccac ttatcactaa
     5461 aaattgcaat tgtagttgat catgatatta atccgtctaa tccaacagag gtggaatatg
     5521 caatatcgac tagatttcaa gctgataaag ggttattaat tatacagaat gcgaaaggct
     5581 ctagtctcga tccatcaagt gatcaacaaa atttactaac aactaagatt gggattgatg
     5641 ctactgctag tctattgaag ccaaatgaag gatttgaaat tgcacatatt ccaggagaaa
     5701 agaacataaa attatctgat tatcttaaag aacaagttta cagaaaataa aacaagttat
     5761 tgattatgtt cgttcatcat gttcaaagaa atattcattt tttataatta taatgatata
     5821 attttatttt ttgtatatta atttaaatat cctaattcaa caaaaaagga gtgtgaatgt
     5881 ctgtgaagcc taatagtttt gctatgaaag attggcattt ggaacatgtt gaaaaggtaa
     5941 ttgttcgcta tgttagggga ttatcaccta atgcaacttc atttgaaaaa cgtaatttta
     6001 aaaaatatag tacaatgtct aattgtgcaa aacaaataga atacgataaa aaacatggtg
     6061 ttactaaaga agaagtgatg gctgtaatgc aaaaaattag aacggatgaa tcattctctg
     6121 aactacttaa aaatccagat tctgttcaaa gattagacga attagaaaaa caattagcta
     6181 ctccgaaaaa acttagttgg taaataattt taaaactaaa tttaaatttt agattttcag
     6241 cattttcaaa tatcttaaaa tagaaattat gaaaagatat ttaaattgta taagaattca
     6301 taatagaaat gaatggtgat attaaaattc ttggtgtaat aactgccagt agcattatca
     6361 ttctgacatt attaacttta aatcaaaatc aagtagctga taataatggt catgccattg
     6421 gatttatcga tatatttgga caagatgata aattaccagt tgttaagaat tcccaaatac
     6481 tcccattttc tgggcaaaat tatgcagatg ttaaaaatag cgagactata aatctcaata
     6541 gttttacggt atcaacttgg tttaacactg atatgaatgc aactgaaaaa gaaacattct
     6601 tgataaataa aggtggaact ggaagtgata agagtggatc gaatctcaat tatggaattt
     6661 tcctaacaaa cagagaaaaa gtgagaggag gatttgaaac ctcgctaggt gatgattatc
     6721 ttgttacttc tcaatcttca tataatgatg gacaatggca tagtacaatt cttacttttg
     6781 atgaaaaatc tcatatattg aaattatata tggatggaat agaagttgcc accaattcta
     6841 caaagattgg tgtgaaacca gattctaccg gaaagcaacc tataagactg ggagcgaatt
     6901 ctctggctga aaaaggaaag ataacgggaa attatactgg tcagttggat gatattcagg
     6961 tttggaattt tgcttttaca aacgatgaag tgttagattt gttcaaaaaa gaatcacaaa
     7021 tccaaagata atgaattagt aatggaagtt attttcactg actaaaatat tttttatgta
     7081 ttttaagaat taaaagtgtt gtacaataca aaaattcaaa gtcatttatc ctcaggaaaa
     7141 atatagttta ataacatatc aagagcttta ttctttattt tacctttaaa atattctgtt
     7201 ccttttatgg gtttctctaa tgatttgtct ttttcaactt cttcaactgg tctatgatct
     7261 aatgcaccct caaattgcat tctatattgt tgaaaatttg atttaacaat tgaatcaaaa
     7321 acatctttca tccagacaga acctataaaa taaacatagg gcggattcac acgtttctta
     7381 agaaactcat caagactatt aagacactgt gaaactttct tagactctga atctatcttt
     7441 attatctttt catctattcc tctatttatt aattcatttt taagtaatcc tgaataaaga
     7501 gaatctgcag taactaggat aatagtttta tgggcgtcag gtttagagcg tacaattacg
     7561 tgatacatcc tttcacaaag attaattctt tccagcacat gagagggtaa ttccgatgat
     7621 gaaggatttt gatgtattga atataaaata atgagatttc catctgtaaa acgagtttct
     7681 gacaatgatt taattacata tttcaaatga gtctttttat acattcccaa ttgatacaaa
     7741 aataacaata aatctcattg aaactttttt tagtaattat taaattattt acgatcataa
     7801 aatatgtgag atgatggata tatatacaga aaatcgtcct tggggtaaat ttgaaaaatt
     7861 tcatgaaaac attcccagta ctgttaaatt aatttatgtg aatgccaatt caagacttag
     7921 tttacaatat catcaacata gaagagaatt ttggaaaatc atcaagggaa gtgccgtgat
     7981 cgaaatagat ggaaaagagc tgaaattaaa agaaaatgag actataaata ttcctctagg
     8041 ggcaaggcac agaataaagg cattagaaga ctgtataata ttagaaattt catatggaaa
     8101 ttttgatgaa gatgacattg ttagaataga agatgattat aatagagtat aataaataaa
     8161 taaataaata aattaactaa acggaaattt tccgctcttc ttaaaaacgc tcataattct
     8221 cttcatagta gttattgtat cgaaacaaga tgatgaattt tgatcataac tacaaggtga
     8281 ataattgaaa tatttatcat ctgtgtaatg gtcaaatttg aatatacctt ttattatttc
     8341 cattaataac ggaattatcg cagacctagc cccccatgct cctttggtgt ttactatcca
     8401 gaacattatt gttggatcat aatcaatagg aaaaataatt ctctttaatg attttaattc
     8461 ttcagaagaa taatgtcctt ctatttgtat ccaacctttg gagagtttat gcattaaaat
     8521 tgcaaattta taacattgga aacatctatc atcatatata agcaaagggc gaattatctt
     8581 agagaacata ttaattatat agaaacttag ttatttaaaa ttatattgat aaaagtatgg
     8641 acagaataaa tatttagttt tacttaataa agtaaggtat gggaaaaagg aagggaaaaa
     8701 ttgaacaaat ttttagcaaa gcaatctatt cagataatcc agagttatat ataattttat
     8761 atcgagattt caacacgatt atttctgtta ctttgccaag atttatggaa atatcagaaa
     8821 atttacaatt aataccaata actagaattg tgcaaataag aaaagggaat gaaatactat
     8881 atcagaaatt caattatcta aaagaatttt tgggttcgaa agacaaacat aatttcaatt
     8941 caatgaaagc aaatgataat tattaaatta tgttatactt acaattcttt tattgattga
     9001 tagaattaat aagaaaatca tatattcagt tattggagtt atagtcgtaa taggaatatc
     9061 tatattcttc ttgcaacaat ttgaattccc aagtattcca aagttggatt ttaaacctga
     9121 atttaatcaa ggagctctta gtgaggcgag gcaattagaa atctctttaa acaatctttc
     9181 ttttacacgt attaataaca atgacatcaa tattaaaacg gcattcaatg tttataatcc
     9241 aaatatggga acattgcttc ttgaaaatat aaattataat attttactag acaacatacg
     9301 aatttcttct ggagatattg gcaagaagcc agaaggtttc gtagcttctc aggaaaatat
     9361 ttatccaatc ataggaaata gtactgttat tctgaaggat gataaaacaa tatcaaaaga
     9421 taatagaatt gctgaagtat ggaataaaat tatggatgaa aagtctaaat ttcaaatcca
     9481 tggtaatttt gcatataaac aaacctcaag ttttcaagca actgctggtg aaatcgagtt
     9541 tcaattgaat tacccgtaga tgttctagaa actttatttt tgacggtaag gtttaatatc
     9601 ctttaatatt tttttatagt gacaagcggt catcgtctag tttggttagg acactggcct
     9661 tccatgcaac aaatcatgcg aagcaagccc gcaacccggg accttattaa agtaaggcgg
     9721 gaattcaaat cccggtgacc gcattctaca taggaattca tatactcgtc tttgttataa
     9781 tactccgctt gtagtaaaca acaaagaaaa ggaggagggg aggtagagaa atgtcgtcat
     9841 cgtcatcctc atcttgttca gtcaaacttt caaccatagt ggataacaag attggtcttg
     9901 tacccaacaa agaaaactcg tctataatat acgatttcta taaatatatg caagagaaag
     9961 gttcatctga taaccatcag gtaaacaacc caaaagtagt tattgatttt gctaattttt
    10021 tgggattatt ccgttgatag acaaatatca gacttgaaaa aagccggtat attaataaaa
    10081 taacttattc ttttaagaaa atatagtttt ttgtttgtgt atctaatcta tcttaatgaa
    10141 atctcaagta cagataactc tttttagtgc ggtcatttta gatgacccag aaaaaacttt
    10201 tcatcctcct agggaaaaaa ttcatcaatt tttcactgat tttgataacc atccatcacc
    10261 aaacataata gcataggaaa tagttgaagg cctggaatca gcattagaga aattttctag
    10321 attgaagatg aattaataat aagtaaatag catagtatta acttattatt attaaaaaat
    10381 cttttaccgt tatattctta tatatgtcaa tcccacccag gaataaaaaa atggctaagc
    10441 gttactggat acttgcaata atatcagtat ttattctaat tatggcttat gcttcttcta
    10501 taactctacc ttatggactg gatttgtatg ctaatcttgt atggatggca tttttctttg
    10561 gaatgcttct tgttagtata ggggcaggaa ttcaggtaag agcattagaa aaaaagatta
    10621 aagaaatgaa caaaaccact aagtaatttt catgcgtcgt ttcaattatt ttcttaagat
    10681 atggtcctga gatgaatttc tgaattaaaa tctgaccaac cctcaatctt gttttatact
    10741 tatttcaagg gcatctttaa catttttgtt aaattctaaa ctagtttctg ttgtatggct
    10801 gttatatcta ccagaatttc taacgtagtc taaataatct ttcatctcgc tttcatatat
    10861 caaaacatta tctgcaacta ctattgcttt ctttttcagc aaattatttt cttctagaag
    10921 tttaagatag aaaaaatact ggtttttttc tgcatctaaa aagacaaagt caaatttata
    10981 atgattatta tcaagcattg gaatgacctt tatagcatca ccagtaatta catctattct
    11041 atctgataat cctgctctct caatattctt ttttgcaatc tttgtaagat ttttgtctat
    11101 ttccaaacag gtaacgataa tttctttagg aggagtgtca ttaccatcat aatgataata
    11161 atcatcagca tgtgttttta atacaaaatt tgccatcaaa atagctgaat atccatgcaa
    11221 agttccaatc tcaagaatcg ttttaggttt atacctcttg ataacttttc ctatgatttt
    11281 tccttttatt ggaccaattg acggaaggga attctttttt gctatctctt ctatttctga
    11341 taaaacatcc aacaatacta tgctcttttt gagagtagtg ctattattat tgttatcata
    11401 tctgcaattt atctctactt ttaataatga aatatttatt tatgcgtcag gaaatagaag
    11461 ggaattttct catattgaag atgaactaat aattactaag tagcaatctt caaagaatta
    11521 tcattatttc aataaataaa tttttttatt acaatttctt atattttttg gataggctct
    11581 aaatattact aatagtacga tttaaaaaaa taccaaaggt tattagacta ggttaaatgt
    11641 taaaacctag tcgattttta gttactggta gatcactgtc tattgactga ctgtcctact
    11701 gattttatgt agctggtatt tgttcttacc aaatccttta gattgtcgcg tgtttgttct
    11761 aatgctgtat tgtataccct catgtttgat gctagagcgt tgtttatgag attgctcgta
    11821 tttaacaggt aacttgtaaa gttattcacc agt
//
LOCUS       DATIAS010000298         2119 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1279046, whole genome shotgun sequence.
ACCESSION   DATIAS010000298 DATIAS010000000
VERSION     DATIAS010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279046"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VLA74_05970"
     CDS             <1..193
                     /locus_tag="VLA74_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50291.1"
                     /translation="IFDDNIVEPFDFISVENIHDTVTIGIVKELRTIRNTDVTISKQI
                     SNQVNNNLRDSTSSTENYL"
     gene            225..1643
                     /locus_tag="VLA74_05975"
     CDS             225..1643
                     /locus_tag="VLA74_05975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50292.1"
                     /translation="MANAQIDNIKSNSKTKYKGNIRMPVNIDKVVRFATEKEIFIALG
                     IPKMEDPVMAGVIEMSNGQKIAIPIAMSYLAGPDTAHINATGISGNLKTSYVMFLLHS
                     MYQKLIKNKEVAIIIFNTREDDLLYIHQREEGKITEKDNKLYEILKISADPFDNVTYF
                     LPRGKDGKPISVHIPPNFRTYSYELKDIYDRLDLLLSSESYDPRYNLYTIINYIYESW
                     PLQDSSNNIVKNWSDLLKYTNYPPEIVGHKSMYLHFLGYIQKFKRSSLFTDKRKTSIY
                     IGNEISKIKGGDVFVIDIAMIPTLEEQSLVIGDVMKNIDELYSSRYSFENSLEHELEN
                     GIERNTEPNKQKKPKYILIFIDEINRFLPHIYSLGNRSAVAEQIIKTIIAGKSRNTIL
                     LSAQQFKSAVDPILHENTGIHMIAKLGLSELSTSSYSMLDDITKGNIAQMDKGEIVMI
                     QPAIRHPVKVVFPRPPFKRISR"
BASE COUNT          808 a          291 c          331 g          689 t
ORIGIN      
        1 aatttttgat gataatattg tcgaaccttt tgattttata tctgttgaga atattcacga
       61 tacagtaacc attggtattg ttaaggaatt aagaactata agaaatactg atgtaacaat
      121 atcaaaacaa atttcaaatc aagtaaataa taatttaaga gatagtacaa gcagtacaga
      181 aaattatctt tgatcaagga ataagaattg caagagcagt tgttatggca aatgctcaga
      241 ttgataatat aaaatcaaac tctaagacta aatataaagg aaatattaga atgcctgtta
      301 atatagataa agtagttaga tttgctactg aaaaggaaat ttttatagcg ttaggaattc
      361 caaaaatgga agatccagta atggctggtg taatagaaat gtcgaatggt caaaagattg
      421 ctatacccat tgcaatgtca tacttggcag gacctgatac tgctcatata aatgcgactg
      481 gaatttctgg aaatttaaaa acttcttatg ttatgttttt attacattct atgtatcaaa
      541 agctgataaa gaataaagaa gtagccatta taatttttaa tacacgggag gatgatttac
      601 tgtatattca tcaaagagaa gagggaaaaa ttacagaaaa agataataaa ttgtatgaaa
      661 tcttaaaaat atcagcggat ccttttgata atgtaaccta ctttcttcca agaggtaaag
      721 atggaaaacc tatatccgta catatcccac ccaattttcg aacatactca tatgaactaa
      781 aagatattta tgatagactt gatcttctac tttcatctga aagttacgat cctcgctata
      841 atctttatac aataattaat tatatttatg aatcatggcc tctgcaggat agctctaata
      901 atattgtaaa aaattggtcg gatttactaa agtatactaa ctatcctcca gagatagtag
      961 gtcataaatc aatgtatttg cattttctag gatatatcca gaaatttaaa agatcatctt
     1021 tgtttactga caaaagaaaa actagtatct atattggaaa tgaaataagc aaaataaaag
     1081 gaggcgatgt attcgttatt gacattgcaa tgattcctac tctagaagaa caatcattag
     1141 ttattggaga tgttatgaag aacatagatg aactttattc atcacgttat agttttgaaa
     1201 attctcttga gcacgagtta gaaaatggaa tagaaagaaa tacagaacct aataaacaga
     1261 aaaaacccaa gtacatttta atatttatag atgaaatcaa taggtttctt ccacatattt
     1321 attccttggg aaatcgatcc gctgtagcag aacagattat aaaaacaata atagcaggaa
     1381 aatcaaggaa tactattctt ttatcagctc agcaattcaa gagtgcagtg gatccaattt
     1441 tacatgagaa tacagggata catatgatag caaaactagg attgtcggaa ttatcaacaa
     1501 gttcttattc catgttagat gatattacta aaggaaatat tgctcaaatg gacaaaggag
     1561 agattgtaat gattcaacct gctattcggc atcctgtgaa ggttgtattt ccaaggcctc
     1621 ctttcaagag aataagtaga tgaggctggg tcataataat tcaataacca aacttctgct
     1681 gatataaaaa atatatatag gaatgtaggt tgatgtttgt aaaataacta aaaaatagaa
     1741 taaagatatg agttatttta gaattattaa tacttttaat aaatttttta atatttagtg
     1801 ataaatttat caaaattagt attggctaaa attattcatt catacatata tacattataa
     1861 ctataatgta ttctagtagt acaagtcaca atagccaaaa tcactaccta gatcatttaa
     1921 cacatgattt caaagaaaaa ttatttgtac attgtgtcag aagcgttttt acgaatatat
     1981 ggggttgttg cctaattcga cacaacatac ggtgtcatct ttatttctag tctttttgcg
     2041 cattgcaatc tgtttagaac acccatgttc catcctatac ccattatcaa tccaaatctt
     2101 ttctggttat tctttaatc
//
LOCUS       DATIAS010000299         3452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1144034, whole genome shotgun sequence.
ACCESSION   DATIAS010000299 DATIAS010000000
VERSION     DATIAS010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144034"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VLA74_05980"
     CDS             <1..663
                     /locus_tag="VLA74_05980"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2382 domain-containing protein"
                     /protein_id="HSF50293.1"
                     /translation="GIDDADFGEIQRVDPEYVITQKGIIDKEIFSFPINLAQDYDGNR
                     VLFKVTEEEARNTYMQSQNIDGSSNGGIETETSTTTNDDELLSKIKEEKEIVIPLMVE
                     ELVVTKKELQDEITITKEPIRETKTEQVQLIHEEIEIERRKINNLSNSGNDDTSISKD
                     VHPVETKTEIKIPLKREEAEVTKKPYVKEEVVVKKKTVTDKKEITDEVTSEELDTSNI
                     DK"
     gene            1089..1430
                     /locus_tag="VLA74_05985"
     CDS             1089..1430
                     /locus_tag="VLA74_05985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50294.1"
                     /translation="MGDAPVDLSGIENKTVLQPTGEAQTTMLNKTTIPFEQTTVEGIN
                     QTGAQQQGASDASSSAGQSANQTGEAIQGNASKVGAKVSEVAQKLGENITEGAKGLAE
                     TIGKGLQDLAK"
     gene            1980..2246
                     /locus_tag="VLA74_05990"
     CDS             1980..2246
                     /locus_tag="VLA74_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50295.1"
                     /translation="MFSQRSGLSSNIAKMALPLVSKFLLGNANPQRASGFMSMLPSSI
                     TNMFSNDEKQRFTSTQENRSEDEVIDQISHECCNGDREKGRKAY"
     gene            complement(2517..2993)
                     /locus_tag="VLA74_05995"
     CDS             complement(2517..2993)
                     /locus_tag="VLA74_05995"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2382 domain-containing protein"
                     /protein_id="HSF50296.1"
                     /translation="MNDKEIDVYSKQGILSQIKEKISDLVHSNRDNGETKENEDDNKN
                     QKEDNKDLEKQKREEPPMKGESVPLFDNQQTENSNAQLSQGNNNKELTNNNNKYKTLI
                     PLYAEEITISKKMVKVEEIVLNKRRVVETENVDIDTIKERINVEYADGRKEKITDY"
     gene            complement(3128..>3452)
                     /locus_tag="VLA74_06000"
     CDS             complement(3128..>3452)
                     /locus_tag="VLA74_06000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50297.1"
                     /translation="NNNNNNNNSDSDTIIQEKNKNKIEDITTDKKPLIISPLQSEKVT
                     IIVKSPMLENKKSIKSKIEGALDSMEDNTSNVVNKVVKGGEQISILSKEIQNQFLNPN
                     NNNDQ"
BASE COUNT         1266 a          468 c          517 g         1201 t
ORIGIN      
        1 ggaattgatg atgctgattt tggtgaaatc caacgtgtcg atccagaata tgttataact
       61 caaaaaggta taattgataa agaaattttc tcctttccga taaatctagc ccaagattat
      121 gatggtaata gagtattatt caaagtaact gaagaagagg caagaaatac ctatatgcaa
      181 tctcaaaata tagatggttc tagtaatggt ggaatagaaa cagaaactag tactactact
      241 aatgatgatg aattattaag caagataaaa gaagaaaaag aaattgttat tcctcttatg
      301 gtagaagaat tagttgttac aaaaaaggaa ctacaagatg aaataactat tactaaggaa
      361 cctattagag aaacaaaaac agaacaagta caactaatcc atgaagagat agaaatagaa
      421 agaagaaaga ttaataattt atctaattcc ggtaatgatg atacttcaat atctaaagat
      481 gtacaccctg tagaaaccaa aactgaaata aaaataccac taaagagaga agaagcagaa
      541 gttacaaaaa agccgtatgt taaagaagaa gttgtagtaa aaaagaagac agttactgat
      601 aaaaaagaga taaccgatga ggtcacctct gaagaattag atacctcaaa tatagataaa
      661 taataaggaa aataaataat acaataattt aagattatat atctatatgt tcttatatat
      721 tcaatgtctt tgtttcttta tataacaaat gaaaaattgt aatagatata aaaaaagttt
      781 tacatctttt tatattatgt tgaatattct ttatctaaat ggaaaataaa ataattaaaa
      841 gtactttacc aactgtattt gcaataatgg ttttggctat tatttgaaat tctattcaaa
      901 atacagtact ggcacaatct agttctaatg acagttccga aaatcaaact aaagcaaaaa
      961 ttacaggtga accagaaact ataattatca ataaaacaac cataccagcc cagcaaacaa
     1021 ccgttacagt aaatgaaact acatcatcaa tagataagtc agcaatccaa cctttacaaa
     1081 atcagacgtt gggagatgcg cctgtagatc tttctgggat cgaaaataaa acagtattac
     1141 aaccaacggg tgaagcacaa actactatgt taaataaaac aactatacct tttgaacaaa
     1201 caacagtcga aggtattaac cagactggag cacaacaaca aggtgctagc gatgcatcct
     1261 ctagcgcagg tcaatcagca aaccagactg gagaagcaat tcaaggaaat gctagcaaag
     1321 ttggagcaaa ggttagtgaa gtagcacaaa aactaggaga aaatatcact gaaggagcaa
     1381 agggacttgc tgaaactatc ggcaaaggat tacaagattt agcaaagtaa tttccttttt
     1441 ttattatttt atagtataat tttattattg ttattagaaa ttatttcttg acatcattta
     1501 tttccatgtg atgaactaga ttagaagccg cagatgaaga gacaagagaa tgagtcgctt
     1561 atgaagatgg aaaagcatct agtggtggcg gcagaaagaa gaattaataa caaataaaaa
     1621 atggattaat cttccaaact gagaagtatt atttttatta aattttttaa atttacttct
     1681 tatacttcaa caatgcttat gaagttggct tccaaagatc acttaaggag caaaggatat
     1741 cgtgaggaat tttttttgaa agattagaaa ggataggaga gcaataatag taccacttga
     1801 tattttactt cctttgttta tatttcttta ttgctttgta tttttttatc aataaagttt
     1861 aattaaagaa aataatatta cattacaatt attaaactac tactgtaaat agtaaataaa
     1921 taactaatca ttataagatt tattgtctat aatatgacat gttagatgat atatttgata
     1981 tgttttcaca aagaagtgga ttatcttcta atattgctaa aatggcacta cctttggtat
     2041 caaaattctt gttaggaaat gctaatccac aaagagcatc aggatttatg tcaatgttgc
     2101 cttctagtat aacaaatatg ttttcaaatg atgaaaaaca aagatttaca agtacgcagg
     2161 aaaatagatc ggaagacgaa gttattgatc aaatatctca tgaatgttgt aatggagata
     2221 gagaaaaagg aagaaaggct tattaagaag cagtaaaagt attaagagag aaaacaaaag
     2281 aaggacaaca aaaacaacaa caagaacaag gagaagaagg aggatttctc gatgacatat
     2341 ttgatagtat caaaggtgga cgtggtggag gaggtttatt ttagtactaa ttagtaataa
     2401 tttattttat tttaattgta tttattctta ttgttataat ggaatttttt taccaaattt
     2461 tatagcagtt agttcgtaat taattatatg tgtatgttta ttgttacaac aactcattaa
     2521 taatcagtta tcttttcttt tctaccatct gcgtattcaa catttattcg ttcttttata
     2581 gtatctatat ctacattctc tgtttctact actcttcttt tattcaacac aatttcctca
     2641 acttttacca tttttttgga tatagtaatt tcttctgcat acaagggaat caatgtttta
     2701 tatttgttgt tgttattagt taactcttta ttattattac cttgagataa ttgtgcatta
     2761 ctattttctg tttgttgatt atcgaaaagt ggtacacttt cacccttcat tggaggttct
     2821 tctctttttt gtttttctag gtctttattg tcctcttttt ggtttttatt atcatcctca
     2881 ttttccttcg tttcaccatt atcacggtta gagtgaacta aatctgatat tttttcttta
     2941 atttgagaaa gaattccttg ttttgaataa acatcaattt ctttatcatt cacaaattct
     3001 ttttcatatc taacaggtac ctttatctca tctctttcta cccatctttt ttcaatgctt
     3061 atatcttcag ataaaatctt tttagaaaaa gaataatttt ctcctactac aggaatgaca
     3121 aattcttcta ctgatcgttg ttgttgttgg gattgagaaa ttgattctgt atttcttttg
     3181 aaagaattga tatctgttct cctcctttta ctaccttatt aacaacatta cttgtattat
     3241 cctccatgga atctaaggct ccttctattt ttgattttat agatttttta ttttctagca
     3301 taggcgattt gactattata gtaacttttt cagattgtaa tggagaaatt attaacggtt
     3361 ttttatccgt tgtaatatct tctatcttat ttttattttt ttcttgaatt atagtatcac
     3421 tatcactatt attattatta ttattattat ta
//
LOCUS       DATIAS010000300         2522 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1961913, whole genome shotgun sequence.
ACCESSION   DATIAS010000300 DATIAS010000000
VERSION     DATIAS010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1961913"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1330)
                     /locus_tag="VLA74_06005"
     CDS             complement(<1..1330)
                     /locus_tag="VLA74_06005"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HSF50298.1"
                     /translation="MIHPKSNLKTLFLDKRSQLKFILFTIIIGSSFYYNETFALDEID
                     NKFSSLNNSSVQITSENNKTLESEPIFSNVTNITNNPTDSVYAQIVANDNNVYMIWQE
                     SVTQNPNEKNYDIFFIKSEDDGNTFSKPINLSNNPGFSEHPQIAVSKNGVFIVWADNT
                     NSNNTEIMFTKSEDNGTTFSKVINLSNNSQNSNNQEISAFDENVYVVWQDIDSTTNFY
                     GNEINEAAEKKPLTNIMFKASLDTGKTFKDSIELANNTNDAYPKINSYKEHVYVTWNS
                     ENSNSSSENDDDDNENSGLFFIKSSDKGNNFENSIRIAHYNFGESQISVNENKVFIVW
                     GGLHAKNINDIYFVQSDDNGTAFTDPYIISEKSTGAAAENRNNTDKINGPSNVEIPTN
                     NPIYIVWQEKMSQENQDIFLTTNIKNDMQYSKIINLSNNSGISECPSIAIS"
     gene            1850..>2522
                     /locus_tag="VLA74_06010"
     CDS             1850..>2522
                     /locus_tag="VLA74_06010"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSF50299.1"
                     /translation="MDSHYAVDTNSQSTVGSLTASKKILRSTTQLKQSNKPRFIDKKQ
                     RHKNIVNEGLIAGQKIAKISIITLLGIGITELVVGYWGGSIVAIADGIYSFSDAMISF
                     IVLLGLRIAHRPPNKKFQYGYHKVESFAALMAAIGMIIIGSIIFYTSYQAFVHPHEIK
                     QPLITMVVLAAAGVISLHRAFQMRNIANKYNLLSLKTDSKNFMKDGSASIIGFVSVVI
                     ATQFGF"
BASE COUNT          864 a          356 c          359 g          943 t
ORIGIN      
        1 tagagatagc gatagaaggg cattcagaaa ttccactatt gttacttaaa tttattatct
       61 tgctatattg catatcattt ttgatatttg tagttaggaa aatgtcttgg ttttcttgtg
      121 acatcttctc ttgccatact atatatatag gattattagt gggtatttcg acattggaag
      181 gaccattaat tttgtctgta ttatttctat tttcagcagc agcgcccgta cttttttctg
      241 aaattatgta tggatctgtg aaagcagtac cattatcatc gctctgaaca aaatatatgt
      301 cattgatatt ttttgcatgt aatcctcccc acacaataaa tactttattt tcattaactg
      361 atatttgtga ttctccaaaa ttataatgag ctattctaat actattttca aaattatttc
      421 ctttatctga actttttata aaaaataatc cgctattttc attatcatca tcatcatttt
      481 ctgagctact attactattt tcactattcc aagtaacata aacatgctct ttataagaat
      541 tgattttggg ataagcatca ttagtattgt tagctaattc tattgaatcc ttgaatgttt
      601 ttccagtatc caaactggct ttaaacataa tattggttaa tggttttttt tctgctgctt
      661 catttatttc attaccatag aaattagtag ttgagtcaat atcttgccat acaacatata
      721 cgttttcatc aaaagctgaa atttcttgat tatttgaatt ttgtgaatta ttgcttaggt
      781 ttataacttt gctaaatgtt gtaccattat cttcactttt tgtaaacatt atctctgtat
      841 tattggaatt ggtgttgtct gcccaaacaa taaatactcc atttttagat actgcaatct
      901 gaggatgttc tgaaaagcca ggattgttac tcaaatttat tggtttacta aatgtatttc
      961 catcgtcttc actttttata aaaaaaatat cgtaattctt ttcatttgga ttctgtgtta
     1021 cagattcttg ccatatcata tatacattat tgtcatttgc cactatctgg gcatacacag
     1081 aatctgtagg attgtttgta atattagtaa cattggaaaa tataggttca gactctagtg
     1141 ttttattatt ttcacttgtt atttgtacgg aggaattatt gagagaggag aacttgttat
     1201 caatttcatc tagtgcaaaa gtctcattat aataaaatga agaacctata ataattgtaa
     1261 ataaaataaa tttcaattga gatcttttat ctaaaaaaag agtttttaaa tttgattttg
     1321 gatggatcat atatgctaat aattatttgt ttttcaatat attttaatac acctgaatca
     1381 ttgcatcaat ttttatattt ttttaaaatg taataagcaa taatcaggct aggggtagaa
     1441 tagtaaattc tgacgaccat atccatatat gctaagaaga tgaaaaataa ttataatatc
     1501 tctcacatgt atacaagtgg ataatattat tcattaatct attataaaca agcaattaaa
     1561 aactagattc tatttcttgt gaaagaagat caatttctta aattagcgcc ataaatcaaa
     1621 atcaaagaaa agatatatgt atttgctagt ctattccata agaatctcca tattaaaaaa
     1681 gctttcaacc tactctaggt tttgtacatt acaatttaaa tcttgataat aaataaagca
     1741 tcaaagatat gtacatgtta ataattaaat caaaaagtta agatgaatac acaatgatca
     1801 ccataatact ttatatatta tgagatctat aattctatca atataatagt tggacagtca
     1861 ttacgctgtg gatacaaaca gtcaaagcac tgtaggtagt ctgacagcct caaaaaaaat
     1921 attacgaagt acaacacaat taaaacaaag taataaacca cgttttatag acaaaaaaca
     1981 acgacacaag aatattgtta acgaaggttt gattgcagga caaaaaatag caaagatttc
     2041 tataataaca ttacttggta taggaattac agaattagta gttggttatt ggggtggaag
     2101 tatagttgca atagcggatg gcatatattc attttctgat gcaatgattt cttttatagt
     2161 attacttgga ttaagaattg ctcatagacc tccaaataag aaatttcagt atggatacca
     2221 caaagtagaa agttttgcag ctttaatggc tgctataggt atgataataa ttggttcaat
     2281 tatattttat acttcatacc aagcattcgt acatcctcat gaaattaaac agcctcttat
     2341 taccatggta gttttggctg ctgctggagt aatatcatta catagagcat tccagatgag
     2401 aaatatagct aacaagtata atcttttatc actcaagaca gattcaaaga actttatgaa
     2461 ggatggttct gcatccataa ttggttttgt tagtgtagtg attgctacac aatttggatt
     2521 tt
//
LOCUS       DATIAS010000301         4554 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1417843, whole genome shotgun sequence.
ACCESSION   DATIAS010000301 DATIAS010000000
VERSION     DATIAS010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4554
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417843"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..899)
                     /locus_tag="VLA74_06015"
     CDS             complement(<1..899)
                     /locus_tag="VLA74_06015"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HSF50300.1"
                     /translation="MIIFFISSLLYDYEINGIDETKNASGFFQNSLLKKFKQNNDSTI
                     INFPHSTITNLTNNNEDSIYGQIGAFENNIYVVWQESVTKSLPYHNYDIFFIKSQDKG
                     KTFSKPINLSNNTEFSERPQIAVSKNGIFIVWADTTNPNNKEIIFIKSQDKGKTFSKP
                     INLSNNSKDSYNQEISAFNENVYVVWQDTDKSNNNNNTNGSIMFKSSNNTGNTFNSSI
                     ELINNTNDAFPKINSYDNYVYIVWNNENKKNSGLFFVKSFDKGNNFQRIIKLNNDSNF
                     GESQIAVYKNEVLVIWGGFLSKN"
     gene            complement(1170..2114)
                     /locus_tag="VLA74_06020"
     CDS             complement(1170..2114)
                     /locus_tag="VLA74_06020"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF50301.1"
                     /translation="MILFYIKTGRYKLTLYPLLIIFASLIAFLSFSTLNVIYASHLVI
                     DTTKLSNDMYVIHGSGGNVILSIGDDGVVLVDDQYAPVTEIIKSVIAKLTDKPIKFVI
                     NSHWHPDHTGGNEKLGEAGAIIVSHDNVRKRLSSDQPFEFINQTIPALSEKGLPIITF
                     SENMTFYQNHEEIKITHLDSGHTDGDSAVFFTNKNVIYIGDDFSDRSYPFMDLSSGGS
                     VDGLILSLQKILLLINEETKVVGGHSGISNQTKVKDYLDMVIHIRNHINQMIEEGKSL
                     TEIMQTKPTSKYDTIYYDDSFIKPKDLVKNIYMSLKER"
     gene            complement(2610..3359)
                     /locus_tag="VLA74_06025"
     CDS             complement(2610..3359)
                     /locus_tag="VLA74_06025"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HSF50302.1"
                     /translation="MNKLEGKVAVITGGSSGIGLATAKRFVTDGAYVFITGRRQTELD
                     VAVRDIGKNVTGVQGDVSNLADLDRMYAMVKQQKGHIDILFANAGLGEFATLGEISEA
                     HFDKTFGVNVKGLLFTVQKAIPLFHHGGSIILNSSVAASKGVEGFSVYSATKAAIRSF
                     ARTWTVDLRHHKIRVNAISPGLIDTQALSNLMQKEEQSEQLKKNLASTVPLRRMGTAD
                     EVAKVASFLASDDSSYVTGIELFVDGGEAQI"
     gene            3940..4416
                     /locus_tag="VLA74_06030"
     CDS             3940..4416
                     /locus_tag="VLA74_06030"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF50303.1"
                     /translation="MTNFLLFVTVTVLFTTILGSNPVNHLAFAQEGTITIEGSVNDTM
                     SGQNTSQGSTTNGTLASAQEAVSISPASSNPSASQFYVPPEITVSSGTTVTWTNDDAT
                     IHTVTEGTPGGVSITPAFDSSIISPGATWEHTFDTAGEFDYYCTLHPFMTGKVIVK"
BASE COUNT         1425 a          761 c          663 g         1705 t
ORIGIN      
        1 atattctttg atagaaatcc gccccaaatc actaacactt catttttata aactgctatt
       61 tgtgattctc caaaattact atcattattt aatttaataa ttctctgaaa attatttcct
      121 ttatcaaaac tttttacaaa aaataatcca ctgttttttt tgttttcatt gttccatact
      181 atataaacat aattgtcata tgaattgatt ttaggaaatg catcattagt attgtttatc
      241 aattctattg aactgttaaa tgtatttccg gtattgttgc tacttttaaa cataatactg
      301 ccgtttgtat tattattatt attgcttttg tctgtatctt gccacacaac gtatacattt
      361 tcattaaaag cagaaatttc ttgattgtat gaatcttttg aattattgct taggtttatt
      421 ggtttactaa atgtttttcc tttatcttga ctttttataa atataatttc tttattatta
      481 ggattggtag tgtctgccca cactataaat attccatttt tagatacagc aatctgagga
      541 cgttctgaaa actctgtatt gttgctaaga ttaattggtt tactaaatgt ttttccttta
      601 tcttgacttt ttataaaaaa tatatcataa ttatgataag gtaaactttt agtaacagat
      661 tcttgccata caacatatat attattttca aaggctccta tctgtccata tattgaatct
      721 tcattattgt ttgttaaatt agttatagtt gaatgaggga aattaattat tgttgaatca
      781 ttattttgtt tgaatttttt caataagcta ttttgaaaaa agccgctagc attttttgtt
      841 tcatcaattc cattaatctc atagtcataa agtaatgagc taataaaaaa aataatcaaa
      901 atataactcg aatttgttaa aatattatta tttggaaata tattgaaaat tttaaggtgt
      961 aacaaagatt tagtcattat taattattaa ttgtagtcaa atgtatttca atgtatcgta
     1021 atttagaatc atttttcaga ataaatatat taaatcactt gtatatgaaa aaattataat
     1081 ataaaaaaat aatgtgtcca ttttattact tgaagtaggt tttgacgata attgtttaca
     1141 tttataaggg ataagagaag aatcaattat tatctttctt ttagactcat atatatattt
     1201 tttacaagat cttttggttt tataaaacta tcgtcataat aaatagtgtc atattttgac
     1261 gttggtttag tttgcattat ttcagtaagt gatttacctt cttctatcat ttgatttatg
     1321 tggttacgga tatgtattac catatccaaa taatctttta ctttagtttg attagatatt
     1381 ccagaatgac ctccaactac ttttgtttct tcattaataa gtaaaagtat tttttgtaat
     1441 gataaaataa gcccatccac tgaacctcca cttgataagt ccataaatgg ataagatcta
     1501 tcactgaaat catctccaat gtaaattaca tttttatttg taaaaaaaac agcagaatca
     1561 ccgtctgtgt ggccactatc taaatgagta attttaatct cttcatgatt ttggtaaaaa
     1621 gtcatatttt cagaaaatgt tatgattggt aatccttttt cagataatgc cggaatagtt
     1681 tggttaatga attcaaatgg ttggtcacta cttagacgtt tcctaacatt atcatgtgaa
     1741 actattattg ctcctgcttc tccaagtttt tcattgcctc ctgtatggtc aggatgccaa
     1801 tgactgttga ttacaaactt tattggcttg tcagtcagtt tagcaattac tgactttatt
     1861 atttcggtaa ctggggcata ctgatcatct actagaacta ctccatcatc tccaatagaa
     1921 agaattacat ttcccccgga gccatgaatg acatacatat cattagataa tttagtagta
     1981 tcaattacta gatgtgaagc atatattacg tttaaagttg aaaaagatag aaatgcaatc
     2041 aagcttgcaa aaattatcaa taatggatat aaagttagtt tatatcttcc tgtttttata
     2101 taaaataaaa tcattagttt cgtgtatcaa ttcagttaat gctaaattta aataattcat
     2161 ttattaggat taacaagaaa aagatcgcac tatttcttat tcttttatcg tcttattact
     2221 ttatttgtat ctgatgtttt tacagtatat ttacttccgt ctgttgtcag gacaaaagta
     2281 ccatctatat cagttctaag tacattttcg atttttactt gtttatcctg tctaaagatt
     2341 ctttggctgg atatccttga ctattatttt caccggcaaa tatcattatt acatccggac
     2401 taatagatct caagaaggat gtgtcttgac taatatttta aataggctta aacaatctgc
     2461 atatattctc tggtctgtct tgtgagatga gccgtttaat cttatggctg atcattgact
     2521 aacatcttga aactaacggg caagtatgaa tgtgtttcta ttatttgtca tttttaaact
     2581 cccatcaaca tatcccagac taatataact tagatttgtg cttcaccgcc atcgacgaac
     2641 agttcgatgc cggtgacata actgctgtca tccgacgcga ggaacgaggc gactttggcg
     2701 acttcatcag cggtacccat tctcctcaac ggcacggtgc tcgcgaggtt cttcttgagt
     2761 tgttcgcttt gttcctcctt ctgcatcaag ttactgaggg cctgtgtgtc gatgagacca
     2821 ggactgatgg cgttaacacg gatcttatgg tgtctcagat cgaccgtcca tgtgcgcgca
     2881 aacgaacgta tggcggcctt agttgcgctg taaacactaa acccctcgac tcctttggat
     2941 gcagcgaccg atgaatttag aattatcgaa ccgccgtggt gaaacaacgg aatcgctttt
     3001 tgcacagtga acagaagtcc tttgacgttg acaccgaatg ttttgtcaaa gtgagcttcg
     3061 gaaatttccc ctaatgtggc gaattctcca agccctgcgt tggcgaacag aatgtcgatg
     3121 tgtccctttt gttgctttac catcgcgtac atccgatcaa gatctgccag atttgagaca
     3181 tcaccctgaa caccggtgac gtttttaccg atgtctctta ctgctacatc aagttcggtt
     3241 tgacgtcgac ctgtgatgaa aacatatgca ccatcagtga cgaaccgctt tgccgtggca
     3301 aggcctattc cactacttcc acctgtaata actgcgactt ttccttcaag tttattcatt
     3361 atttttactt cgttttcgta ggttttaagt ttatgagttg aagagatacc ttggctcttg
     3421 ttaatcttga aataagttcc acattaacct gtgaattacc atataatgtg aaaaaactta
     3481 ttctccggat tagtaataga ttatgcttat gaaaaactat tctactcgca cgcaatcttc
     3541 cattggttta tcacgttcca aattaatctg attgaaaaag attcttaatc gtctaagata
     3601 ataatccctt gttacttttg atctaatgcc aaaaacaaat atttatttta tcagaaaaaa
     3661 attttatcta ttataaaaac aaaagtaata aaaaaatata ggataataga ggttgatttg
     3721 gtgctgtaat aattggtagt attataaaaa ttttacatta taacttatta tctagttcca
     3781 aatttccttt ttaaatttta tattattcat acactggtga atgaccttgc atacttttac
     3841 ctaaaacctt tcttcctttg tgtttaggtt tcattgaatc aatctttttc tatcacaaac
     3901 ttttataaga tatgtcttct ttaatacatc gaaaatcgca tgacaaactt tttattattt
     3961 gtaacggtca cggtcttatt tactacaatt ttaggatcca atcctgtaaa tcatttagca
     4021 tttgcacaag aaggtactat tactattgaa ggttcagtta acgatacaat gtcaggtcaa
     4081 aatacttcac aaggatctac tactaatgga acattagcat ctgcacaaga agcagtatct
     4141 atttctccag catcatctaa cccaagtgca agtcaatttt atgttccacc tgaaatcact
     4201 gtatcttctg gaactactgt aacatggaca aatgatgatg ctactattca tacagtaaca
     4261 gaaggaaccc ctggtggcgt aagtataaca cctgcatttg attccagtat aatttctcct
     4321 ggtgctacat gggaacatac atttgataca gcaggagaat ttgactatta ctgtacttta
     4381 cacccattca tgacgggtaa agtaatagta aagtaatctt tccttttttt attctaaatt
     4441 aaagtttaaa gataatttta gtcatatatc ctataaaata aattataaaa ttttttaatc
     4501 atttttatag taacataaca attgtctatt atagcttata caacctacca atat
//
LOCUS       DATIAS010000302         4545 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1280101, whole genome shotgun sequence.
ACCESSION   DATIAS010000302 DATIAS010000000
VERSION     DATIAS010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4545
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280101"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="VLA74_06035"
     CDS             complement(<1..441)
                     /locus_tag="VLA74_06035"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSF50304.1"
                     /translation="MRKKIVIASISLMAIMFVGTIAGFLNFAPKSNNMNQDPAADAET
                     IINKLFTPVSVNATALGDEQAKITIVEFADYQCPFCAKFHKETKDSLIQNFVDTGKVK
                     FLFKDLIVNDRPNDKASTLAAAASYCAAEQGKYWEYNDELYKNSQ"
     gene            537..701
                     /locus_tag="VLA74_06040"
     CDS             537..701
                     /locus_tag="VLA74_06040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50305.1"
                     /translation="MESGVLGSVTYECMRCGTNVTIEELSGLPEIKCICGFRVFRKAR
                     QPVVKQIKAI"
     gene            794..967
                     /locus_tag="VLA74_06045"
     CDS             794..967
                     /locus_tag="VLA74_06045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50306.1"
                     /translation="MKIICPDCKKTADLADDFSSVRCKYCSLDMTYGEYVKYIAYKDA
                     RYSDILSDYKSNR"
     gene            1163..1468
                     /locus_tag="VLA74_06050"
     CDS             1163..1468
                     /locus_tag="VLA74_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HSF50307.1"
                     /translation="MSTSEKKISELRPGMRGVNVKVRIDSISEPRTVNLRTGGQAKVA
                     DAQVSDETGVIKLSLWDDQINMIEEGDMVLVENGYTHAFRGENNLNIGKYGKLQKIE"
     gene            1521..2075
                     /gene="ppa"
                     /locus_tag="VLA74_06055"
     CDS             1521..2075
                     /gene="ppa"
                     /locus_tag="VLA74_06055"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HSF50308.1"
                     /translation="MGHLDIFAVNSNLINKIPSGSPNQINVMIEIPKGSNIKYEIDKD
                     SGILFVDRKLFTAMFYPCNYGFIPSTLEGDGDPVDVLVIGEFAVFPLSIIRAIPVGVL
                     LTEDEEGQDSKIIAIPISKIDSSFSSINDVDDIPETLKKQIEHFFAHYKELEGGKYVR
                     ITGWGNREMAEKRITEAIQRYSKN"
     gene            complement(2093..3310)
                     /locus_tag="VLA74_06060"
     CDS             complement(2093..3310)
                     /locus_tag="VLA74_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSF50309.1"
                     /translation="MILAPQELENSASKYAAEAIRLDSQGSRLKAIQFYQRAIEALNK
                     LIQIYPEYKLNKIYLERSNAYLNRIKSLQMSNVLEDEEGKSDKDLVGNDPDSSSDKKT
                     ENEIKKPKESLGEEFDNLIMKEKPKITWKEVVGLDDAKRAIRESIVYPTKRSDLFPLG
                     WPRGLLLYGPPGCGKTLLAAAAAAEIDGYFVNVDAAAMMSKWLGEAEKNVSKLFKMAN
                     KLYESENIPVLLFIDEIDSLLGTRNGEVGGEIRVKNQFLTEMDGISNKSKNSKLYVIG
                     ATNKPWSLEAGFLRRFQKRIYVTLPDNDSRNYLFKQYTAQLKKDKTLKIEELSKLVQG
                     YSASDIKDICQAAQLRVVNELFESGKAMESESNPRPISMNDFKEIIKIRKSTVSIDMI
                     RAYMRWSEQFKAL"
     gene            complement(3513..>4545)
                     /locus_tag="VLA74_06065"
     CDS             complement(3513..>4545)
                     /locus_tag="VLA74_06065"
                     /inference="COORDINATES: protein motif:HMM:NF027528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSF50310.1"
                     /translation="LTKYGIKKEKIGVYYGEKKDIKEITFSTYQSIIKNFDLIKQSDM
                     IILDEMHMVSETAKKLSRIFDVLQANPDKLILGLTATIDEDDPRYSKIMNLIPPVKKY
                     MIKEAVNDGRLSEPKIIFKPVKMNLEERKIYQETSSTIREISLKLKSSDPLVISKLLK
                     TGGHRARLAKLWFESVYKRKKLLTETRSKLNESVNIVKNHPTEKIMIFSETIESIDKI
                     SGILKKNKIQSQIIHNKVKTKERQEILNVWGKNFFVLLSVHTLEIGFDIPSVGIAIIV
                     SNTKNMHQLVQRIGRVIRKTDEKTQSLIYVVYVDNTKDKDILTLVRTSFQTYDVKNPI
                     KQDKISSYF"
BASE COUNT         1471 a          666 c          640 g         1768 t
ORIGIN      
        1 ttgtgaattt ttatataatt catcgttata ttcccaatac tttccttgtt ctgcagcaca
       61 ataggatgca gctgcagcaa gagtagaagc tttatcattt ggacgatcat ttacaatgag
      121 atctttaaat agaaatttga cttttccagt atctacaaaa ttttgtatta gggaatcttt
      181 agtttcctta tgaaatttag cacagaatgg acattggtaa tcagcaaatt caactattgt
      241 tatttttgct tgttcgtccc ctagtgcagt agcattaaca gatactggag taaataattt
      301 attaataatc gtctcagcat ctgcagcagg atcttgattc atattgttac ttttaggagc
      361 aaaatttagg aaaccagcta tagtaccaac aaacataatt gccattaagg aaatacttgc
      421 aattacaatt ttctttctca tgtgttaaat attgtgattc acaaacttat taatcatatg
      481 gaacttcatt ttaacttttg agaacaatta aattaatcta atatatatca aatattatgg
      541 aatctggagt tttaggtagt gtaacttatg agtgtatgag atgtggaact aatgtgacaa
      601 tagaagaatt atctggatta cctgaaataa aatgtatatg tggattcaga gtttttagga
      661 aagcaagaca accagttgtg aaacagatca aggcaattta ataaaatttt ttaaagatat
      721 tcttatctaa tattacgttt agtaaataaa acaactattt atttatagct taactgtata
      781 tatataatag gtaatgaaaa ttatttgtcc tgactgtaaa aaaactgctg atcttgccga
      841 tgatttttca tctgttaggt gcaaatattg ttcattagat atgacttatg gtgaatatgt
      901 taaatatatt gcatataaag acgcaagata tagtgatata ttgagtgatt ataaaagcaa
      961 tagataataa ttaatcttaa aatattttat tctcaaattt gaaaagttat atctcttaat
     1021 atttttttat tatattttaa tttgtctaat ctattgatga atgttttcag gatacgttac
     1081 atcatccttt caatcacaaa tagaataatt caaaaatatt atcatcattt ttattattct
     1141 tctttatttt attattatag taatgagcac tagtgaaaaa aagataagtg agttaaggcc
     1201 tggaatgaga ggtgtaaatg taaaagttag aatagacagt atctctgaac cgaggactgt
     1261 aaatttaaga accggaggtc aagccaaggt tgccgatgca caggtttcag atgaaacagg
     1321 agtcatcaaa ttatccctat gggatgatca aattaatatg attgaggaag gtgatatggt
     1381 actagttgaa aatggatata cgcacgcatt tcgtggggaa aataacctta atattggtaa
     1441 atatggaaaa ttacaaaaaa tagaataata tactacctaa ataccatctt gattttattt
     1501 actaatctgt taagatataa atggggcatt tagatatttt tgctgtgaac tcgaatttaa
     1561 taaataaaat tccaagtggt tctcctaacc aaattaatgt tatgatagaa ataccaaagg
     1621 gaagcaatat caaatacgaa attgacaaag atagcggtat attatttgta gatcgaaagt
     1681 tatttactgc aatgttttat ccctgcaatt atggttttat cccttctact ttggaaggcg
     1741 atggagatcc tgttgatgtt ttggttattg gtgaatttgc agtttttcct ctttctatta
     1801 tcagagcaat tcctgttggt gtattattaa ctgaagatga ggaaggacaa gactctaaaa
     1861 ttattgcaat accaattagt aaaatagact caagtttttc ttctataaat gatgttgatg
     1921 atataccaga gacgttaaaa aaacaaattg aacatttttt tgcacattat aaggaattag
     1981 aaggaggcaa atatgtaaga attacaggat ggggtaatag agaaatggca gaaaaaagaa
     2041 taactgaagc tattcagaga tattccaaaa attaatagtt acatatattt gattatagtg
     2101 ctttgaattg ttcactccac cgcatataag ccctaatcat atctatactt acagtagatt
     2161 ttcttatctt aataatttct ttaaaatcat tcatggatat tggacgagga ttggattctg
     2221 actccattgc ctttccactt tcaaataatt cattaacaac tcttaattgt gctgcttgac
     2281 agatatcttt gatgtcgctt gcactatatc cctgaacaag cttggataat tcttctatct
     2341 ttagtgtttt atcttttttt aattgtgcag tatattgttt aaataaataa tttcttgaat
     2401 cgttatcagg caaagtaaca taaattctct tttgaaatct cctcagaaaa ccagcttcta
     2461 aactccaagg tttatttgtc gcaccaataa catacaactt tgaatttttt gatttgttgc
     2521 ttattccgtc catttctgtt aaaaattgat ttttaacgcg tatttctcct cctacttcgc
     2581 catttctagt tcccagtaag gagtctattt catcaataaa aagcaatacg ggaatatttt
     2641 cactttcata taatttatta gccattttaa atagttttga aacatttttc tcagcttcac
     2701 caagccattt gctcatcatg gcagcagcat caacattaac aaaatatcca tctatctcag
     2761 cagctgcagc agctgcaagt agcgtttttc cacatcctgg aggcccatat aataatagtc
     2821 ctcttggcca tcctaaagga aataaatcgg atctctttgt aggataaact attgattccc
     2881 ttatcgctct ctttgcatca tcaagaccaa ctacttcttt ccaagtaatc ttaggctttt
     2941 ctttcataat taaattatca aattcttcac caagtgattc tttgggtttt ttaatctcat
     3001 tttctgtttt tttatctgag gaactatcag gatcgtttcc aactaaatct ttatcacttt
     3061 ttccttcttc atcttctaat acatttgaca tttgtaatga tttaattctg tttaaatatg
     3121 cattagatct ttccaagtat attttattta atttatattc aggataaatt tgaattaatt
     3181 tatttaaagc ttcaatagct cgttgataaa actgaatagc ctttaatcgg gaaccttggg
     3241 aatcaagcct tatagcttcg gctgcatatt tacttgcact attttctaat tcttgtggag
     3301 ctaaaatcat aattctagtc gatattagtt agttcttaat tgatttttag tattattagg
     3361 taaatcttag ttgttctaaa aactaaaaat aatatactaa tattttaaaa ttcgaatact
     3421 tactactatt tcatattatc ttttttatat cgaattattg ttaaacaaaa caaaaattat
     3481 aattttgatt agttgtgttt tttttaatta aactagaaat atgaagagat tttatcttgc
     3541 ttaattgggt tttttacatc ataggtttga aaggatgttc gaaccaaagt aagtatatcc
     3601 ttatcttttg tattatctac atataccaca tagatcagag attgagtttt ttcatctgtt
     3661 tttcttatta cgcgtcctat tctctgtaca agttgatgca tattctttgt atttgatact
     3721 attattgcta tacctactga tggtatgtca aagcctatct ctaaagtatg tacagataat
     3781 aatacaaaaa aattttttcc ccatacattt aaaatctctt gtctttcttt tgtcttgact
     3841 ttattatgaa taatttgaga ttgtatttta tttttcttta atattccact tattttatct
     3901 atagattcta ttgtttcact aaatatcata attttttctg ttggatgatt tttaactata
     3961 tttaccgatt catttaattt agatctagtt tccgtaagaa gtttttttct tttataaaca
     4021 ctttcaaacc ataactttgc tagtcgggcc ctatgtcctc ctgtttttaa taattttgaa
     4081 attactaaag gatcagatga ttttaatttt aatgaaattt ctctaattgt gctggaggtc
     4141 tcttgatata tttttctttc ttctaaattc atttttacag gtttaaatat gatcttaggt
     4201 tcacttaatc ttccatcatt aactgcctct tttatcatat atttttttac aggaggaatt
     4261 aaattcatta tctttgaata tcttggatca tcttcatcaa ttgttgctgt taaacctagg
     4321 attaatttat caggattagc ctgaagtacg tcaaaaattc tgctcaattt tttggcagtt
     4381 tcgctaacca tgtgcatctc atccagtata atcatatctg attgttttat caaatcaaaa
     4441 ttttttatta tgctttgata agtactaaag gtaatctctt tgatatcttt tttttctcca
     4501 tagtatactc caatcttttc ttttttaata ccatattttg tcaat
//
LOCUS       DATIAS010000303         3516 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1280142, whole genome shotgun sequence.
ACCESSION   DATIAS010000303 DATIAS010000000
VERSION     DATIAS010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3516
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280142"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            714..890
                     /locus_tag="VLA74_06070"
     CDS             714..890
                     /locus_tag="VLA74_06070"
                     /inference="COORDINATES: protein motif:HMM:NF013522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HSF50311.1"
                     /translation="MPIITVSMYSGRTQKEKDRLAEALTDDMVKILHVNKEEVIIVFQ
                     EASHGNWYASGIRL"
     gene            1233..1526
                     /locus_tag="VLA74_06075"
     CDS             1233..1526
                     /locus_tag="VLA74_06075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50312.1"
                     /translation="MTFGESYLVGKALIKDMAYTINIQAGKKGIVLPKELIKSAGEII
                     ASFFSENKKEYILRANLEEGRDWIEIYDDFLFSSLAQDLPSSLIIDYAKKINS"
     gene            complement(1516..2721)
                     /locus_tag="VLA74_06080"
     CDS             complement(1516..2721)
                     /locus_tag="VLA74_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF50313.1"
                     /translation="MIKSFTIYITIAAVMLFIPMIDLTSISAEPIIKDSSLSVDIIAE
                     DLSGPTGMTFLNGDIMVIEKDGNVKLISHDTLQQLTIFQFDVNTKSERGLLGIESNGK
                     DLFFYLTDSNVDPLKNRVFKYSWDGTKLQNPQLLLDLPALPGPNHDAGKLVLDRDKQD
                     GSTENLYVVIGDLNHNGILQNQKSTEKPDDTGVIFRIKSLDGSAVLNNPFSKDVDFSK
                     YFAYGIRNSFGLTLDPQSGFVWETENGPSSYDEINIVKPGFNSGWNEVMGPIDRTNKN
                     ENDLVMIPGAHYKDPILSWKEPVALTDIEFLNSSKLGVNYYNNLFVGDYKNGNLYFLS
                     LNQQREDIDINQYSQELNDRVIDSESELSSVIFGEGFGGISDIETGPDGSLYVLSYEN
                     GDLYRISKN"
BASE COUNT         1297 a          506 c          510 g         1203 t
ORIGIN      
        1 tggcaaaaag tcaatcctta tttggagttt aaatgaatta tcatagtaaa agattttggt
       61 aaagatatta taatgaatac tgaatagcaa acctttagaa aaaatgaaag cacttgtatc
      121 aaaaacaata tttgaaaaga aatagattat ttaaatgaaa atttgatcaa tatgattcta
      181 gttattggtc gtattataac ctaatggaaa attgagtaat gacagattac cagaaaggat
      241 ggattcagca attcaaatcc ttatagtgaa ttagttacat accgatactg aaaaattata
      301 cagatagatt taaaagatat ctaaaatatt ccttattaga ataatcctta aacgatcaat
      361 atttttcagg attaatcata tttgaattga agatgattta tctgagaaat atttattgca
      421 ttcaaaaata ttaacgaata atattttact ggtactttca tttgaatggt cataaagcct
      481 agattcataa ccaaaataag acttttacgt ccgacttaaa ttatatgatg aaacttgtaa
      541 aatcattaaa tcatagtttt tatatattct aaaaaattaa aattttattt gtttgaaact
      601 ggagtgtctt tagtacaaaa agtgagctgt attacttctc actttatttt tcgttttggt
      661 tattcagttt aataaacaaa attcttatct atttctcttt tgattattaa gttatgccaa
      721 taataacagt atcaatgtat agtggtagaa cacagaaaga aaaagataga ctcgcagaag
      781 cattgacgga tgatatggtt aagatattac atgtaaacaa agaagaagtg ataatagtat
      841 tccaagaagc atcccacgga aattggtatg cttcaggcat tcgtctataa tatgacgttg
      901 tcattatatt ctgctaaata tctaaaaaag agaacaaaag gcttgaatat gaaattttag
      961 agatacgaaa atgataaatc gtgatgagga aacagataca atattaagcc aataccaata
     1021 cctatagact ttagttattc tttactgatt actaaaaata gaacgtataa aatacctaaa
     1081 aaaagatact atataggcct taaatcttga tgattatttt caaaattagc gctagtaatc
     1141 aaattttaga attttaaata agttacttta tataattttt aattattaaa ttgaaataaa
     1201 tgtatcaata tccattggaa ttttctttaa agatgacatt cggtgagagt tatttggtag
     1261 gaaaagcatt gattaaggac atggcctata ctataaatat tcaggcaggt aagaaaggaa
     1321 tagttttacc caaggaattg ataaaatcag ctggtgagat tattgccagt tttttttctg
     1381 aaaataaaaa agaatacatt ttaagggcta atttagaaga aggccgagat tggattgaga
     1441 tatacgatga ttttttattt tcgtcgttag cacaagatct tccatcatct ttgataattg
     1501 attatgcgaa aaaaattaat tcttagatat cctatatagg tccccattct catacgacaa
     1561 tacgtacaga gatccatctg gtcctgtttc aatatctgat atgcctccaa atccctcacc
     1621 gaatataacc gacgataatt cgctttcgct atcgattacc ctgtcattca attcttgcga
     1681 atattgattg atatctatat cttctcgttg ttggttaagg gataagaaat acaagtttcc
     1741 gtttttataa tctcctacaa acaaattgtt ataataatta actccgagtt tagatgaatt
     1801 taaaaattca atatctgtta gggctacagg ttctttccaa ctcagaatgg gatctttata
     1861 atgagcgcct ggtatcatta ctagatcatt ttcattttta tttgttctat cgatcggtcc
     1921 cataacttca ttccatccac tattaaatcc aggtttgaca atattaattt catcgtatga
     1981 gcttggacca ttttcggttt cccatacaaa tcctgattga gggtctaaag ttagcccaaa
     2041 gctattcctt atcccataag caaaatattt ggaaaaatca acatctttcg aaaaaggatt
     2101 atttagtact gctgaaccat ctaaagattt aattctaaat attactccgg tgtcatcagg
     2161 tttctcagta gatttttggt tttgtaaaat tccattatga ttaagatctc ctataactac
     2221 gtatagattt tctgtagatc catcttgttt atctctgtct aatacgagtt ttcctgcatc
     2281 atgatttgga cctggtaagg caggaagatc gagtaacaat tgtggatttt gcaatttagt
     2341 tccatcccat gaatatttaa aaactctatt cttcagtgga tcgacatttg aatcagtcaa
     2401 ataaaaaaat agatcttttc catttgattc aattcccaat aatcctcttt cacttttagt
     2461 atttacatca aattgaaaga tggtcaactg ttgtaaagta tcatgtgata tcaatttaac
     2521 attgccatcc ttttcaataa ccatgatatc tccatttaaa aaagtcattc ctgtaggtcc
     2581 agaaagatcc tcagcaatga tatccacact taatgatgag tctttaataa taggctcagc
     2641 agaaatagaa gttaaatcaa tcataggaat aaacaacata actgccgcaa tagtaatgta
     2701 aatcgtaaat gatttgatca tcttcctata taaaaacccg atattttata cttaaaagta
     2761 tctaatattg gttatattct ttttctattt attttgaata tatttctaga aaatgggttc
     2821 cgttacaagt taatgtaaca aataaattga caattacagt agactaatat ttacaatttt
     2881 gataagtata cgtgacagat agatctttag cttagtatat ttacacgatt ctgtggtaag
     2941 atattccaga gaatttatag gtatatagaa aaacaaactg tatcctcttt tggattcaaa
     3001 tccagaaatg aagtacacta taaaaattta ctcctactta gataacatta tagaatactt
     3061 gagataagag agattaccaa catatatgat aggatcatca taaagagtat tcataaattc
     3121 aaccataatg acgtagaacg tctgtttaca aagatagctt attgtcctat ggtaaaaata
     3181 aacaatgatt gaagaaaaca aatattcaaa atatcgtcta caaattcaat ggatctggga
     3241 gtaaaattcc ctacacgata tcgaatttca cttgctggtt atctgaccgg aaacctttga
     3301 acttttaatt cagtacttgg aaggtcctgc caattcgata atatgaagct cgaaagagaa
     3361 tatataacat ttttggaaat aaaaaaaatg tcagaaaaaa ttctcttgaa tttttaaaaa
     3421 ataaaatgat aaatcttcct tggaggtatt aatagcatct gcagcaaatt aaagatctgt
     3481 attctacata caaaattgta taaacaaaat aggaaa
//
LOCUS       DATIAS010000304         3011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_54215, whole genome shotgun sequence.
ACCESSION   DATIAS010000304 DATIAS010000000
VERSION     DATIAS010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54215"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VLA74_06085"
     CDS             complement(<1..266)
                     /locus_tag="VLA74_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50314.1"
                     /translation="MSPKKRVIIIICVFIVTSIIVNLTIIAYNGGFSNSNLVTSTGSQ
                     NLWKAGNNIKPGDFMVYELQTKDNQNNIQNRIVNISFYYTPRSE"
     gene            complement(316..1389)
                     /locus_tag="VLA74_06090"
     CDS             complement(316..1389)
                     /locus_tag="VLA74_06090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50315.1"
                     /translation="MKKHSLIQYGSKMSVKIIFCTLVLSLGTIFLTLPDSQAEDNNWY
                     VGEGVKKDMYVKYTVSYFDTNNGRPFDITIYFKEQDEKGNWIAPVYVEDQGKVVNGTF
                     ILTPLDLTALGTSEIPPEMGKYRTGYANSLQWLAAYVSKPGMSLSSGSWGKIASIGGS
                     EIKPVGSQQLTIPAFSQPIDTTIVQYYKSVASNIYIKNEFPYPVMARTFVDVTTGSPP
                     IQFQFILEETGTGEPPIPEMAGFEAAPPLLERTERGDYYVQLDWNPVPILAGNETTFT
                     IDFLDKEQFPTSKVSYNLKLTGSNNTSIADLKNQFAPDGTKAHKFTFEKPTLVNVEVS
                     INSVKGVDTGAFIEKTDFTVNVN"
     gene            1436..1666
                     /locus_tag="VLA74_06095"
     CDS             1436..1666
                     /locus_tag="VLA74_06095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50316.1"
                     /translation="MIFTLAFKANKNINGYHLYCHVMCDCPSVHFYEVDFKLAGMRVV
                     PTHKNCGESLNDNQFSKFEKELIKYWRFDEKE"
     gene            1751..2005
                     /locus_tag="VLA74_06100"
     CDS             1751..2005
                     /locus_tag="VLA74_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50317.1"
                     /translation="MTKMLNVNIDTEGIDSQEAKDWVTELTNVYADMEVDNVNVSGNK
                     ISFKAGLSGMDDTDPDDIKMKIEEYVSMNEAFQAKNISVS"
     gene            2129..2371
                     /locus_tag="VLA74_06105"
     CDS             2129..2371
                     /locus_tag="VLA74_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50318.1"
                     /translation="MTCKGICVRHKAQKPVGSGRYASGQKRCQICEIFIKWDGLWCPC
                     CGYRLRTKPRNLKYKAKLRAKTKKTVEPLEAPVITV"
     gene            2515..2590
                     /locus_tag="VLA74_06110"
     tRNA            2515..2590
                     /locus_tag="VLA74_06110"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2551..2553,aa:Glu,seq:ctc)
     gene            complement(2778..>3011)
                     /locus_tag="VLA74_06115"
     CDS             complement(2778..>3011)
                     /locus_tag="VLA74_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50319.1"
                     /translation="RVYERGEYLKKPAKYVVFGINEGLNIQSSHLYDNVNSIEKMGKE
                     GIIAVIERRGEIIYYKINRKKFETNSKSISLAQ"
BASE COUNT          956 a          493 c          473 g         1089 t
ORIGIN      
        1 tcttccgatc ttggggtgta gtaaaaagaa atatttacga ttctattttg aatattgttt
       61 tgattatctt ttgtttggag ctcataaacc ataaaatccc ccggttttat attattgcct
      121 gccttccata gattttgaga tccagtagag gtgaccaaat tactgttgct aaaacctcca
      181 ttatatgcta tgattgttaa attgactata atagaggtta caataaaaac acaaattatt
      241 ataattactc ttttttttgg agacataatt tgataaaagt aaattcaata aaaaaattga
      301 aaaattaatt tctttctaat ttacattgac tgtaaaatca gttttctcga tgaatgctcc
      361 tgtatcgaca ccttttacac tattgatcga tacttctaca ttaactaatg ttggtttctc
      421 gaaggtaaat ttatgagctt ttgttccatc tggagcaaac tgatttttca aatccgcaat
      481 agatgtattg ttagacccag tcaattttag gttataactt acctttgatg ttggaaattg
      541 ctctttatca agaaagtcta ttgtaaatgt tgtttcgttt ccagcaagaa tgggtaccgg
      601 attccaatct aattgtacat aataatcccc tctctctgtt ctttcaagta gtgggggggc
      661 agcttcaaaa cctgccattt ctggaatggg cggttcaccc gttcctgtct cttccagtat
      721 aaattgaaac tgaattggag ggcttccagt ggtcacatct acaaatgtcc tggccataac
      781 tggatatgga aattcatttt ttatgtaaat gttacttgca acggatttat aatattgcac
      841 aatggttgtg tctataggtt gagaaaatgc tggaattgtt aattgttgag aacctactgg
      901 cttgatttct gaaccaccta ttgaggctat tttaccccat gaacctgagc taagtgacat
      961 tcctggttta gatacatatg ccgcaagcca ttgtaacgaa ttagcataac cagttctata
     1021 ctttcccatc tctggcggta tttctgatgt tcccaatgca gtcaagtcaa ggggagtgag
     1081 tataaatgtt ccatttacaa cttttccctg atcttcaaca tatactggag caatccaatt
     1141 tcccttctca tcttgctctt tgaaatatat ggttatatca aatggtcttc cattattagt
     1201 atcaaaataa cttaccgtat acttcacgta catatccttt ttcactcctt ctccaacata
     1261 ccaattgttg tcttcagctt gtgaatcagg taaagtcaga aatattgttc ctaatgacaa
     1321 taccaaagtg caaaagatta tttttactga catttttgat ccatattgaa tcaatgaatg
     1381 ctttttcata taagataata attaaaaaac gattcataaa tgtttattat atttcgtgat
     1441 atttacacta gcttttaagg ctaataagaa tataaatgga tatcatttat attgtcatgt
     1501 aatgtgtgat tgtccttctg ttcattttta tgaggttgat ttcaaactag caggaatgag
     1561 agtagtaccg actcataaaa attgcggaga atcattaaat gataatcagt tttctaaatt
     1621 tgaaaaagaa ctaataaaat attggagatt tgatgagaaa gaatagcttt taaatttttg
     1681 ctttatattt ataagctata ttagtcaaat ttattaatgt ctttttcata aatcagttag
     1741 gtgtatttgg atgacaaaaa tgctaaatgt aaatattgat accgagggaa tagactcaca
     1801 agaagctaaa gactgggtta ctgaattaac aaatgtttat gcagacatgg aagtggataa
     1861 tgtcaacgtt tctggaaata aaatctcatt taaggcagga ctttcaggaa tggatgatac
     1921 tgatccagat gatataaaga tgaaaataga agaatacgtt tccatgaacg aagcgtttca
     1981 ggcaaagaat atatcggtta gttaaaaaaa atttccaaac tattgatatt ttttttattt
     2041 tttaaaaatt tttctcctag tttattaaat tttatcataa tatgacttta ttcatattta
     2101 aatactcgtt aatgatatat atataccaat gacttgtaaa ggtatttgcg ttagacataa
     2161 agctcagaaa ccagtaggtt ctggaaggta tgccagcgga caaaaacgct gccaaatttg
     2221 tgaaatcttc ataaaatggg atggattgtg gtgcccatgt tgtggttatc gattgagaac
     2281 taaaccacgt aatctaaaat ataaagcaaa gttacgtgct aaaaccaaaa aaaccgttga
     2341 accactagaa gcccctgtta taactgtcta aatttcagtt ataaaattta tttcctcaag
     2401 tattaatttc cttaatattt cattaatcgt tcgaaccaaa atcaacttcg ttaaatttat
     2461 tcttacttag cactaacaga atttttatat tgagaaggtt tctattgttg ttgggctccg
     2521 atggtgtagt ccggttaagc atttcgccct ctcaaggcga cgatcccggg ttcaaatccc
     2581 ggtcggagca ttttatggaa ctcagtagtc cggtgtctct cttcatttta cagggaataa
     2641 tcccatataa tagggggact atcgtgatca tcattatccc acagatcatc ttagacagaa
     2701 tatcatatat aaaaaatata gctatctcta tttttttaat ttttttattt ttacatctac
     2761 taattgcact ttttttatta ttgagcaagt gaaatcgatt tgctattagt ttcaaatttt
     2821 tttctattta tcttataata gattatttct cctcttctct caattacagc aattattcct
     2881 tcctttccca ttttctcaat ggaattaaca ttgtcatata aatggctact ctgaatattc
     2941 aatccttcat taattccaaa aactacgtat ttagcaggtt ttttgagata ttctcctctt
     3001 tcataaacgc g
//
LOCUS       DATIAS010000305         2388 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1962562, whole genome shotgun sequence.
ACCESSION   DATIAS010000305 DATIAS010000000
VERSION     DATIAS010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962562"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VLA74_06120"
     CDS             <1..609
                     /locus_tag="VLA74_06120"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSF50320.1"
                     /translation="PAVVMIHENKGLNDNIKNMANLLAKERFVVLAVDLFNGEVTTDQ
                     NRASELTQAIRNNPAVAIENLKSASTYLASLPNVNPDKIASLGWCFGGQQSLQLALNS
                     EDHPLSATVIYYGRLVTEPEILSKIQWPVLGIFGDQDKSISVESVKQFEKALNANGIT
                     NEIYIYEGVGHAFANPSGDNYAPQETQDAWEKTVSFLKKYLG"
     gene            complement(897..1256)
                     /locus_tag="VLA74_06125"
     CDS             complement(897..1256)
                     /locus_tag="VLA74_06125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50321.1"
                     /translation="MKGIRKQQGKSVNSRVKISDQSINTNKDNRSTQVTTRRNRILSS
                     QKMVGKEMVKRQSKGTSRKLCMGVTMDKEFLDGYLDKHAAELKISRSWLAYSILRLYY
                     GLPVEQKMKKPFWSSKK"
     gene            complement(1969..>2388)
                     /locus_tag="VLA74_06130"
     CDS             complement(1969..>2388)
                     /locus_tag="VLA74_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50322.1"
                     /translation="NKAAKIARKQNSNNENSKQKSKKNRNSLWFYLSPSEIDYAINVI
                     QIMKNVRYNGVPLAMKGNMTLSGVAKKGFLMILDIYSKKILANDSVIRNFQNIDNEIL
                     RDFIAFRAKYLNMNVDEQFENLERMGIITTKTKSVTK"
BASE COUNT          778 a          397 c          331 g          882 t
ORIGIN      
        1 ccagcagtag taatgattca tgagaataaa ggattaaatg ataatataaa aaatatggca
       61 aatcttcttg ctaaagaaag atttgttgtt ttagcagtag atttgtttaa tggtgaagtt
      121 actacagatc aaaaccgagc atcagaactc actcaagcta taaggaataa tccagcagtt
      181 gcaatagaaa acctaaaatc agcttcgaca tatcttgcat cactgcctaa tgttaatcca
      241 gataaaattg catctttggg ttggtgtttt ggtggacaac aatctttgca attagcatta
      301 aatagtgagg accatccatt atctgctact gtaatatatt atggaagatt ggtaacggag
      361 ccagaaattc tttcaaaaat acaatggcca gtattaggaa tatttggaga ccaagataaa
      421 tcaatttcag ttgaatctgt aaagcaattt gaaaaagcat taaatgcaaa tggaataaca
      481 aatgaaattt acatctatga aggagtagga catgcgtttg caaatccatc aggagataat
      541 tatgccccac aagaaactca agatgcatgg gaaaagacag tatcttttct aaaaaaatat
      601 ctgggctaat gactatttct tcttttattt gattttttat tttatctcag taagtaattt
      661 atgaatgctt ttaaagcatt agaatttttc aaccatggaa ataagtgtaa taatgttgat
      721 ccgtagaatt aaaatataat tacctatcga tttaatattt aaattactaa tgttgaatcg
      781 ttttttctcc cggttatttt atttgttatt cataatattt tttataatat tctttttaat
      841 cttcttttct gaattttttt aataaatctt acagtaaatt cgttgttgta gataaattat
      901 tttttagaag accaaaatgg tttcttcatc ttttgttcta ctggtaaacc atagtacaat
      961 ctaagtattg aatatgcaag ccagctcctt gatattttca attcagctgc atgtttatct
     1021 aagtatccgt caaggaattc tttatccatg gttaccccca tgcataattt tctactagtt
     1081 cctttagact gtctcttcac catttctttt cctaccattt tctgacttga taaaattcta
     1141 ttccttcttg tggttacttg agttgatcta ttatctttat ttgtattgat actttgatcc
     1201 gaaatcttta ccctgctatt aaccgatttt ccttgttgtt tcctgattcc tttcaaaatt
     1261 ccaacttatt aatataacaa gatgatatat acgaattatg atataaagtt atgtcgatag
     1321 tcacaagtac gcaagcccga tttttcaaaa ataacacaaa ctaatgactc atcgcctaaa
     1381 aataataaaa actttagatg caataattta ttaaaatgat actaaggatc taaaattatc
     1441 atttcgaaaa ggactctggc agattatcga taaagatctg gattattagg aaatactgaa
     1501 tcagaacgaa tccaaaatat tgttatttcc tctatacttt taaacagtta caagacaaat
     1561 tctgacaaac atgcatgtga tgactataaa tataatttgg atgttcttga atacatgata
     1621 tcctcagctg ttgaattatt ggaagaaaaa aagatgattt catctaaaga atggagagaa
     1681 aggatgcaac tgaaaatatt tacaagtccc taattttttt tagctttgat tgcttttgtt
     1741 attccatgtc tctaatcttt attatttagt taaacattca aactctgaaa cctctaaccc
     1801 caattctctc tgtaactttt gtatcacttt tgcataataa atttccttgt caggttctaa
     1861 tttatctata gctatccaat aacctaccca agccttgtgt aaagcacccc atgtctgatt
     1921 ttcaaaaaat tatagttatt gaattacgat ccagcctcat ttatttactt attttgttac
     1981 actctttgtc ttagtcgtta taattcccat cctttctaaa ttctcaaatt gctcgtcaac
     2041 attcatgtta aggtacttcg ccctgaaagc tataaagtca cgaagtatct cattatcaat
     2101 attctgaaag ttcctgatta cactatcatt ggcaagaatc ttctttgagt agatgtcaag
     2161 tatcatcagg aacccctttt ttgccacacc tgataaagtc atatttcctt tcatggcaag
     2221 aggtactcca ttatacctta cattcttcat tatttgtatt acattaatag cataatctat
     2281 ctcagaaggt gataaataga accacaaact attccgattt tttttggatt tttgcttgct
     2341 gttttcgtta tttgagttct gttttctggc tattttcgca gccttatt
//
LOCUS       DATIAS010000306         7374 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1008579, whole genome shotgun sequence.
ACCESSION   DATIAS010000306 DATIAS010000000
VERSION     DATIAS010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7374
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1008579"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..1022
                     /locus_tag="VLA74_06135"
     CDS             51..1022
                     /locus_tag="VLA74_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSF50323.1"
                     /translation="MSKINNNKKIIKDTKQQQGASLDSNNVYANNKSIRSVLRIVKSE
                     TTQDGEGVTLNRSFPNNYISELDPFLLLDEMGPMDVKPGKQKGFPNHPHRGFETVTYL
                     LEGKFEHKDSQGHIGTISAGDVQWMTAGSGVIHSEMPEKEFSKNGGKLHGFQLWVNLP
                     KKNKMMKPRYQEISSSKIPTGTTKDNGNVSVKVIAGESLGAQAVIDTITPIMYLHFKL
                     EPGSRIIQPVPEEYNAFAYVIKGEGLFEHSNTSNNIIERGNLVIFDRDGKEVYIQAAQ
                     DSKDPLELLLIGGTPLREPIARYGPFVMNTQQEIYQAIEDYRSRRLG"
     gene            1146..1754
                     /locus_tag="VLA74_06140"
     CDS             1146..1754
                     /locus_tag="VLA74_06140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50324.1"
                     /translation="MSEEDNTSNKQSKPVTVIVKRIAKKNKIKEFEEWLSGISKEVSR
                     QEGSMGIDIIKPTPDINNKSKLEYVVIFRFNNYDNLAKWEKSSIRNEWLQKGRKLVEA
                     DPDVQKMTGLEFWFTPYFKDESSPMIPIQPPPRYKMVIVTIPVISILLLTLVPQIHFL
                     TEMLSIPFPIRLVIALTITVLLMTYVIMPTLTKLLKPWLFKT"
     gene            1857..2222
                     /locus_tag="VLA74_06145"
     CDS             1857..2222
                     /locus_tag="VLA74_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50325.1"
                     /translation="MAKVSDSIYLNSKPETKTLEEKCEILNIWDILGRRWSLLILKNL
                     STKNVIRFNELKRSLKDISNTVLSDRLFELEREGLITKKIYPEIPLKVEYRLTTKAKD
                     LEPILQSLDRWCEKWELKK"
     gene            complement(2298..2966)
                     /locus_tag="VLA74_06150"
     CDS             complement(2298..2966)
                     /locus_tag="VLA74_06150"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HSF50326.1"
                     /translation="MNSKNSFKYERLSPDNAALLLIDHQAGLLPLVNDWSQSELKNNV
                     LALAKIAKIFDLPVIITSSYEQGPNGPLAPGIKEIFPDVKVIKRQGEINAWDDPNFVK
                     AVEATGRKKLIMAGIVTDVCIAFPALSAIEAGYDVIVAIDASGTFNQTVQQAAVLRMS
                     QAGAIIMNWFSIVCELQGDWKKSTSPDMVRLFTEHLVTYGMIVSSYVANKPDQTMIPK
                     DFKA"
     gene            3181..5130
                     /locus_tag="VLA74_06155"
     CDS             3181..5130
                     /locus_tag="VLA74_06155"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSF50327.1"
                     /translation="MSNQQETITADIILLNGHIATIDNNQLFVSSVAIKNGIFIAVGN
                     NDESLSYKGKDTKVIDLNGRTVVPGLNDSHIHIIRGGLYYNLELRWDGVPSLAEALNR
                     IKEQSQHTPDPHWIRVVGGWSELQFKEKRMSTIEEIESNAGNVPAFILHLYHCAMINK
                     KTIEVAGYNKDTPNPPGAEFDHDENGNLTGLITAKPAATILYQTLAKGPKLLYDEQIN
                     STRQFMYELNRFGVTSAIDAGGGFQNYPDDYKVISDLAKQGLLTVRIAYNLFTQKPKK
                     ELEDFTNWIKMVKPGEGNNFYRMNGAGEMLVFSAADWENTLEPRPDLVNEMESELKEV
                     VKVLVQNRWPFRIHATYNESITRFLNVFEEVNKEIPFNGLRWFFDHAETISEDNIQRV
                     KQLGGGIAIQDRLAFQGEYFIDRYGKDVSENSPPIKKIIEMGVPLGAGTDATRVSSYN
                     PWISLYWLVSGKSVGGITLRSKNNCLDRIEALKLYTLGSAWFSGEQDKKGSIEVGKFA
                     DLSVLSNDYFSVNDEKIKNIESVLTIVGGQVVYATDEFKDLAPLPLPINPSWSPVAIF
                     GGYYNKNSVNFSSSANNSKTSHKNNHYEKSLVKEETVISNSYLEHQIDTNIELPNSGD
                     VYKNTNKISNIPRSFCPCCDDFFSF"
     gene            5181..6929
                     /locus_tag="VLA74_06160"
     CDS             5181..6929
                     /locus_tag="VLA74_06160"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF50328.1"
                     /translation="MTTNDRNQQKEEINSGEKKLSGFSPLSHPIYKTLWFATIGSNIG
                     NAMHEVGALWLMTNLSQSPLMVALLQTSTALAMVLLSLFAGGLADVVDRRKLLLITQA
                     YMFIVAITLGFLTIGELITPTTLLLLTFMLGAGAAISIPSSIAITLEMVSKPEIPATI
                     TLGGVSLNIGRALGPAIFGFIIASLANPGFVFILNALSFIGLIFVLSRWHPSQEKRNM
                     PAEHIVGAMKAGVRYLIRAPAVQSIIIRAISFTIFGAALFALLPSLMRYELGFDSLEF
                     GFMLGSLGTGAIIGGTLILPYLREKISTEWHFSGATILFAAVMILLTSSSDFIFLLGV
                     MFAGGIAWIIVMASLNVSMYKANPKWVGARSLATHTTIFQGGLAAGSVIWGSVAANLD
                     VRTALIIAAVGLGLGLLTGLKFKLISDVESKSIKTSASMYWSSPTLLFEPSLEEGPVL
                     VKIEYKIDKEHQQQQNNKNILNDFLIALKDLSKIRKRDGAIQWGVYRDGTEPNIFVET
                     FVVESWAEHLRQHERLTAADIEILDKVRSFHIGDKPPVVTHYVAEPLPTTSKYSIVTG
                     SRDKKKEIENEKIDEK"
     gene            6919..7122
                     /locus_tag="VLA74_06165"
     CDS             6919..7122
                     /locus_tag="VLA74_06165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50329.1"
                     /translation="MKNNLPNLSDNKEILLSAGLNDFIVSKEQTESSYNLFSKSGANV
                     TIKCQHSSHKLLQDDMYFMQENG"
     gene            7188..>7374
                     /locus_tag="VLA74_06170"
     CDS             7188..>7374
                     /locus_tag="VLA74_06170"
                     /inference="COORDINATES: protein motif:HMM:NF018479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HSF50330.1"
                     /translation="MTNNNKNKNIKNEERHATWLELFYDLVFVVTISQLSHYLFHEVS
                     LSNFFGFLFLFIPVWWSW"
BASE COUNT         2640 a         1110 c         1276 g         2348 t
ORIGIN      
        1 tagtattaaa ttactactta agttaaatac cttgaattgt ataatatagt atgtcaaaaa
       61 taaataataa taaaaaaata ataaaagata cgaaacaaca acaaggagca tcattagatt
      121 ctaataatgt ttatgccaat aacaaatcca ttcgttcagt cttacgaata gtaaaaagtg
      181 agacaactca agatggtgaa ggtgtaacat taaacagatc gtttccaaat aattacattt
      241 cagagcttga tccatttcta ctattagatg aaatgggacc aatggatgta aaacctggaa
      301 agcaaaaagg atttcctaat catccacata gaggatttga aactgttacc tacttgttag
      361 aaggaaaatt tgaacataaa gattcacaag gtcatattgg aactattagt gctggagatg
      421 tacaatggat gactgctggt tctggagtta ttcattcgga gatgcctgaa aaagaattta
      481 gtaaaaatgg aggtaaattg catggatttc aattatgggt taaccttcct aaaaaaaaca
      541 agatgatgaa accaagatat caagaaatat ctagctcaaa aattccaact ggaactacta
      601 aagataatgg taatgttagt gttaaagtta ttgcaggtga atcattaggt gcacaagcag
      661 taattgatac aataactcca attatgtatt tacattttaa gctagaacct gggtctagaa
      721 taatacaacc agttccagaa gaatataatg catttgctta tgtaattaaa ggagaaggat
      781 tatttgaaca tagtaatact agtaacaata taattgaaag aggaaatcta gtaatatttg
      841 atagggatgg gaaagaagta tatattcaag ctgctcaaga ttcaaaagat ccacttgaat
      901 tattgctaat tggaggaact cctttaagag aaccaatagc aagatatgga ccatttgtaa
      961 tgaatactca acaagagatt tatcaagcca tagaagatta cagaagtaga agattaggat
     1021 aaaatatctc tttacttttt taatcagaaa ccaaataaag aaaataatat aacattattt
     1081 caattgttga ggaattatta caaacagcaa aagactattt attttatcaa ctagatataa
     1141 aaaagatgtc ggaggaagac aatactagta acaaacaatc aaaaccagtt actgtaattg
     1201 ttaaacgtat tgctaaaaaa aataaaatca aagagtttga agaatggctt tcaggaattt
     1261 ctaaggaagt ctctagacaa gagggaagta tgggtattga tataatcaaa ccaactcctg
     1321 atatcaataa taaatctaaa cttgaatatg ttgttatatt taggttcaat aattatgata
     1381 atcttgctaa atgggagaaa tcctcaatac gaaatgaatg gttacaaaaa ggtagaaaac
     1441 tagtagaagc cgatcctgat gtacaaaaaa tgacaggact agagttttgg tttaccccat
     1501 attttaaaga cgaatcttca cctatgatac ctatacaacc tccaccacgt tacaaaatgg
     1561 taattgttac tattccagtt atctcaattt tgctattaac tttggttcct caaatacatt
     1621 ttttaacaga aatgttatca ataccatttc caataagact tgttattgct cttactataa
     1681 cagttctact aatgacttat gtaataatgc ccactttaac aaaattgtta aaaccttggt
     1741 tattcaaaac ttaatcaaaa atgcatttac ttttttgaat attaatagga agaaaatttg
     1801 ttgattatga tagcttaatc tttattactt ggtagtataa tataacctac tataacatgg
     1861 caaaagtatc tgatagtatc tatttaaatt ctaaacctga aactaaaact ttggaagaaa
     1921 aatgcgaaat actgaatatc tgggatattt taggcagaag atggtcttta ctaatattga
     1981 aaaacttaag caccaaaaat gttattagat ttaatgaatt aaaaagaagt ctaaaagata
     2041 ttagcaatac tgttttatct gatagactat tcgaacttga acgagaaggc cttatcacta
     2101 aaaaaatata tccagaaata cctcttaaag tggaatatag attaacaaca aaagcaaaag
     2161 atttggagcc aattttgcaa agtcttgata gatggtgtga aaaatgggaa ttgaaaaaat
     2221 aataataagt ttaactaaaa aataattgat gtatataata atatgatact taaaaataat
     2281 aaggttgttt tttattctta tgctttgaag tcttttggta tcattgtttg atctggttta
     2341 tttgccacat aactacttac tatcatacca taagtaacaa gatgctcagt aaataatcgt
     2401 accatgtctg gagaagtaga ttttttccaa tcgccttgaa gttcacaaac aatagagaac
     2461 caattcataa ttatagctcc tgcttggctc atacgcaaaa ctgctgcttg ctgtacagtc
     2521 tgattaaacg taccagaagc atctattgca actattacat catatcctgc ttctattgca
     2581 gatagagctg gaaatgcaat acagacatca gtaacaattc cagccatgat gagtttctta
     2641 cgtcctgtag cctctaccgc ttttacaaaa tttggatcgt cccatgcatt tatctctcct
     2701 tgtcttttta ttactttaac atcagggaat atttctttta taccgggagc gagtggccca
     2761 tttggcccct gctcatagct tgacgtaata attacgggaa ggtcaaagat cttggctatt
     2821 tttgctagag ctaatacatt attctttaat tcagattgtg accagtcatt aaccaaaggt
     2881 aaaagaccag cttgatgatc tattaatagt aatgctgcat tatctggcga gagtctttcg
     2941 tatttaaaag aattctttga attcatcaaa tacataacag taatgaatta tttaagtatg
     3001 gtagtattct agaactaatt tagttatatt tatattacta tactatatat gcgtaatata
     3061 atatactaca tttaattgaa tattatacta gataatatca aagtgagtat gtaagtttta
     3121 actaactacc atgtttatat ctttagattt tgttacataa tttgaaatgg agattgctta
     3181 atgagtaatc aacaagaaac aataacagca gatattatcc ttttaaatgg acacatagca
     3241 acaatagata ataatcaact ttttgtatct tctgttgcta taaagaatgg tatttttatt
     3301 gctgtaggca ataatgatga aagcctttct tacaaaggaa aggatacaaa agtaattgat
     3361 ttaaacggac gtactgtagt tcccggctta aacgattctc atatacatat catacgagga
     3421 ggattatatt ataatctgga attaaggtgg gatggggtac cttctctggc tgaggccttg
     3481 aatagaatta aagaacaatc acaacatact ccagatcctc attggattag agtagttggt
     3541 ggatggtctg aactgcaatt taaagaaaaa aggatgtcta ctatagagga aatagaaagt
     3601 aatgctggaa atgtaccagc atttattttg catctttatc attgtgcgat gattaataaa
     3661 aaaacgattg aagttgcagg ctataataaa gatacaccaa atccaccagg cgccgaattt
     3721 gatcatgatg aaaatggcaa cctaactggt ttgataaccg caaaaccagc agcaacaata
     3781 ctttatcaaa cattagcaaa aggtcctaaa ttgttatacg atgaacaaat taattctact
     3841 agacagttca tgtatgagct caatcgtttt ggtgttacaa gtgctattga tgcaggagga
     3901 ggatttcaaa actatccaga tgattataaa gttatcagtg atttagcaaa acaaggtcta
     3961 cttactgttc gtattgcata taatctcttt actcagaaac caaaaaaaga attagaagac
     4021 tttacaaact ggataaagat ggtaaaacct ggtgaaggta ataactttta tcgtatgaat
     4081 ggagctggcg aaatgttagt cttctcagcg gctgactggg agaatacact tgagccacgt
     4141 cccgacctag taaatgaaat ggagtctgaa ctaaaggaag ttgttaaagt cttagtacaa
     4201 aatcgatggc cttttagaat tcatgcaacc tataatgaat cgattactcg ttttctaaat
     4261 gtctttgaag aggtaaataa agaaattcca tttaacggtt taagatggtt ttttgatcat
     4321 gcagaaacaa tatcagaaga taatattcaa agagtaaaac aattaggagg aggaatagca
     4381 atacaggata gacttgcatt tcaaggcgaa tactttattg acagatatgg aaaagatgta
     4441 tcagagaatt ctccacctat caaaaaaata attgaaatgg gtgttcctct aggggcagga
     4501 acagatgcaa ctagagtatc tagttataat ccttggattt cactttattg gctagtatca
     4561 ggaaaatcag ttggtggcat aacattaaga tctaaaaata attgtcttga taggatagaa
     4621 gcacttaaac tatatactct tggtagcgca tggttttctg gtgaacaaga caaaaagggc
     4681 tcaattgaag ttggaaaatt tgcagattta tctgttctat ctaatgatta tttctctgta
     4741 aacgatgaaa aaataaaaaa tatagaatca gtattaacaa ttgttggagg acaagtagtt
     4801 tatgcaacag atgagtttaa agatttggcc cctctacctt taccaattaa cccttcctgg
     4861 tcgcctgttg caatttttgg tggatattat aataaaaaca gcgtgaattt tagctctagc
     4921 gctaataatt ccaagactag tcataaaaat aatcattatg aaaaatctct agtaaaagag
     4981 gaaactgtaa tatcgaattc atatttagaa caccaaatag atacaaatat agagttacca
     5041 aattctggtg atgtatacaa aaatacaaac aagatatcta atataccgag aagtttttgt
     5101 ccatgttgcg atgacttttt ctcattttaa atcgttagat ttttgttctt ggaataagta
     5161 attaaatata tattaaaaca atgacaacta acgatagaaa tcaacaaaaa gaagaaatca
     5221 atagtggaga aaagaagtta tcaggatttt ctcctcttag tcatcctatc tacaaaactc
     5281 tctggtttgc tacaattggt tccaatatcg gaaatgcaat gcatgaagtt ggcgcactct
     5341 ggttaatgac caacctgtca cagtctcctc ttatggtggc attattacaa acttctactg
     5401 ctctagctat ggttttattg tcgcttttcg ctggtggttt agcagatgta gtagatcgta
     5461 gaaaactgct tttgataacg caagcttaca tgtttattgt tgccataacc ttgggatttt
     5521 tgactattgg agaactcatt acgcctacta ctttgttatt gctaactttt atgttgggcg
     5581 caggagctgc aataagtatt ccatcatcaa ttgccattac tctagaaatg gtttcaaaac
     5641 ctgaaatacc tgcaacaatt acacttgggg gggtttcatt aaatattgga cgagcattgg
     5701 ggccagccat ctttggtttt ataattgcat ccttagccaa tccaggattt gtttttattc
     5761 taaatgcttt atcattcata ggattgattt ttgtattgtc tagatggcat ccatctcagg
     5821 agaagagaaa catgccagca gaacacatag taggagcaat gaaagcaggc gtacgctatc
     5881 ttatccgtgc acccgcagta caatctatta tcattagagc catatcgttt actatttttg
     5941 gagctgcctt gttcgccctt ttaccttcat tgatgcgtta tgaattagga tttgattctc
     6001 tcgaatttgg ttttatgctt ggtagtttag gtactggtgc aataattggt ggtacattga
     6061 tcttacctta tctcagagaa aagatctcta ctgaatggca tttctctggt gctaccattc
     6121 tatttgctgc tgtcatgatt ttacttacat cctctagcga ttttattttc ttgttaggag
     6181 ttatgtttgc aggaggtatt gcctggatta tagtaatggc cagtttgaat gtctcaatgt
     6241 ataaagctaa tcccaaatgg gttggtgcaa ggtcccttgc tacacacacg acaatattcc
     6301 agggaggcct agctgctgga agtgtgatat ggggttccgt agctgcaaac cttgatgtga
     6361 gaacagcatt aataattgcg gcagtaggtt taggtctagg gttattaaca ggtctaaagt
     6421 tcaaattgat tagtgatgta gaatcaaaat caataaaaac atctgcatct atgtattggt
     6481 cttcccctac actgcttttt gaaccaagtt tagaagaggg gccagttttg gtaaagattg
     6541 agtataaaat tgataaagag caccaacaac aacagaacaa caaaaatatc ctcaatgact
     6601 ttttgatagc tctcaaagat ttatctaaaa ttagaaaacg agatggagca attcaatggg
     6661 gagtatatag agatggtaca gaaccaaata tttttgttga gacttttgta gtagaatcgt
     6721 gggctgaaca tttacgacaa catgaacgtt taacagctgc agacatagag atactagata
     6781 aagttcgtag ctttcacatc ggagataaac ctccagttgt tactcattat gttgcagaac
     6841 ctcttcccac tacatcaaaa tacagtatag taacaggcag cagagataaa aaaaaggaaa
     6901 tagagaatga gaaaatagat gaaaaataat ctacctaatc tttctgacaa caaagaaatt
     6961 ttattgtctg ctggattaaa tgattttata gtttcaaaag aacaaacaga aagttcgtat
     7021 aatttatttt ctaaaagtgg tgcaaatgtt accataaaat gtcaacattc aagtcacaaa
     7081 ctcttacaag atgatatgta ttttatgcaa gagaatggct aataaaaaat ttcagtaatt
     7141 aaacttctat taatgtcaaa taattaatct gttattttta atttgccatg actaataaca
     7201 ataaaaataa aaatataaaa aatgaagaac gtcatgcaac atggttagaa cttttctatg
     7261 accttgtttt tgtagtaaca atttcacaat tatctcatta tttatttcat gaagtgtctt
     7321 tatctaattt ttttggattc ttatttctct ttatacctgt ttggtggtca tggg
//
LOCUS       DATIAS010000307         2568 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1552945, whole genome shotgun sequence.
ACCESSION   DATIAS010000307 DATIAS010000000
VERSION     DATIAS010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1552945"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..354)
                     /locus_tag="VLA74_06175"
     CDS             complement(67..354)
                     /locus_tag="VLA74_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50331.1"
                     /translation="MKFGFSVEKSSPEGTLISGEKEQFRKLESEGFRVKVLPATNILR
                     VGSYEIDIEKGLTEITPELQIPEDLKDRWTHYLVQLQEPPTEDLIKSLSEK"
     gene            complement(1219..1593)
                     /locus_tag="VLA74_06180"
     CDS             complement(1219..1593)
                     /locus_tag="VLA74_06180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50332.1"
                     /translation="MTTLKNRSKNIVTIGLSISMLFIPLQVFAYTLQIEPYDGTYTQS
                     QTGVAIQTYVPSTGYWKETSYSGLPPTSFNEYFDDYQMPMYADYSVCAYYLTTSEEIG
                     CESHYRANLNIASVPIDLSPWD"
     gene            2017..2469
                     /locus_tag="VLA74_06185"
     CDS             2017..2469
                     /locus_tag="VLA74_06185"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF50333.1"
                     /translation="MDETVIQIGNKHFWLWICIEPIHQSVFGIHISKERNMFVAENFI
                     QSLVEKYGKHTVYTYDGGTWYDEACNVIGLKHYLHSSIEKSLMERVNQYLKDRIESFD
                     DYYPCMQKEKCNLFHVHNWIQFFVSMYNDTITNNNNDFELEEVNTILN"
BASE COUNT          909 a          321 c          374 g          964 t
ORIGIN      
        1 atatagtgta gagacactta gctttgtcga ataaatctat tgtaccatag acttaaaaac
       61 tataaactac ttttcggata ggctcttaat caaatcttct gtcggaggtt cctgtaattg
      121 tacaagatag tgtgtccacc tatcttttaa atcttctgga atttgtaatt ctggtgttat
      181 ttcagtgagt cccttctcga tatcaatttc ataggaccca actcttaaaa tatttgtggc
      241 aggaagaacc ttaacacgaa aaccttctga ttcaagtttt cgaaattgtt ctttttctcc
      301 agatattaat gttccttcag gagaactttt ttccacagaa aatccaaact tcatagcagt
      361 ttcattttct aatgaaaatg catctgatga gcgagatatt cctctttttt aatcaatgct
      421 ttatctgtca ttttttttgt atattgatct tattaattta aataattttt ggtaaatata
      481 atattaacta gtaattaaga tcataaatta atttttcggc gccgaaaatt tttgtttatt
      541 aatttatatt actaatttta ataattagat ttttaatatc aattaatgaa aaaaagaatc
      601 tgttttatta gttatatctg cgattctatt atctcttctt atatttcaaa aattttgaca
      661 tactagaatg gaggtttctg aagcttcagg gtttcaatat catgttctat agaagataat
      721 aatacaaata cattagaagg tctatgtatt taaagtaaaa aggtagtgac tatacaattc
      781 caaatttatt ctgtcattaa cattatgaat agttaatttc aattacaact ttatagttta
      841 tatgattatc agctccattt gagaaattat aaaaaataat atcaagagac aaaatatctc
      901 taattatgtc tctatatcat cttagagcta aaatataatt taataataaa acttttattg
      961 atacggtttt atcaaaatat attttatagc atcataatat tttataaatc ttgtaaaaca
     1021 atctctatgt tatacagtgc aaggatattg tggatcaatt aaggtttgtt ataatactct
     1081 atggcttcat catattttta tagatggctt gtttactcga aactattatg agttatatta
     1141 aatagaattt ctgagattaa ctatattata aaaaaaataa aattttggtt taataaaaga
     1201 atcttatttt atttctaatt aatcccatgg tgacagatca ataggtacac ttgctatatt
     1261 caagttagcc ctataatgag attcacaacc aatttcttcg ctagtggtca aataataagc
     1321 acatactgaa tagtctgcat acataggcat ctgataatca tcaaaatact cattgaatga
     1381 agtaggagga agtccggagt aacttgtttc cttccaatat cctgtagacg gaacataggt
     1441 ttgaatagct actcctgttt ggctctgtgt gtaagtccca tcatatggct cgatttgcaa
     1501 ggtatatgca aatacttgta atggaatgaa aagcattgaa attgagagac caatagttac
     1561 gatatttttt gatctatttt ttagagttgt catttttgtt atatgttatt tatatttgta
     1621 ataaataaag ttattcatct aagacaaaaa taatttttga gtatacctat aatattacaa
     1681 tttaatagaa cgagattaat taattcaaat agaatatcac aatataatta atttatcatg
     1741 atatggacct gttaatttaa ggaaatagat ttagctgtga atgtcctatt tctaatctac
     1801 tgaccgttag attatttgaa agaaataaag aacactcacc tttattgtta tgtattcttt
     1861 gtatttgtac tttcttggtc tgagtttaag aaatatatct aatgaattgg aaccttttaa
     1921 gggtcaaaaa aagaagtcat gttactatat ggaattggat aaaggtttgg ttcatgtcag
     1981 atatacaaca aaagaaaaag aatatctgca tttgtaatag atgaaactgt tattcagatt
     2041 ggcaataagc atttctggtt gtggatttgt atagaaccaa ttcatcaatc cgtgtttgga
     2101 atacatattt caaaagaaag aaacatgttt gtagcagaga actttattca atcattagtt
     2161 gaaaaatatg gaaaacatac agtttacaca tatgatggag gtacatggta tgatgaagca
     2221 tgtaatgtga ttggattaaa acattattta cattcttcaa tagagaaaag tctaatggaa
     2281 cgggtcaacc agtatttgaa agatagaata gaaagttttg atgactatta tccatgtatg
     2341 caaaaagaga aatgtaattt atttcatgtg cataattgga tacaattctt tgtttctatg
     2401 tataatgata caataacaaa taataataat gattttgagt tagaggaggt gaatactatc
     2461 ttaaattaac agagcctatt attctctttt atcttagatc aaatatgtaa tattttatat
     2521 tgtcgctaat tacgcaatag atctaatatt ctaaagtgtt ttgtaagt
//
LOCUS       DATIAS010000308         3129 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1280877, whole genome shotgun sequence.
ACCESSION   DATIAS010000308 DATIAS010000000
VERSION     DATIAS010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280877"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..557
                     /locus_tag="VLA74_06190"
     CDS             138..557
                     /locus_tag="VLA74_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HSF50334.1"
                     /translation="MTKQDSHSDSELKKIYQLKNIAVVGMSKNEEKAGNFVPKYLIEH
                     GYNVIPVNPTISEVLGRKSYPTITDIPERVDVVDIFRKSEDVPPVIDDALNRKDDIKV
                     IWMQEGIYNEEAEKKAKENGMDVVYNRCMMAEHRRLF"
     gene            complement(724..1251)
                     /locus_tag="VLA74_06195"
     CDS             complement(724..1251)
                     /locus_tag="VLA74_06195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50335.1"
                     /translation="MRSNGSSEHHQNNNLKVVIAFGNFIGKDISFYGINKKEQILEFL
                     NTKVNSHDEDPDKRWITTWNNYLNRLRLFYRWLYNNDNDVDHENWQTPEFVNIKNKKS
                     KRISPYLESEIWEKDELLSIIKYEPYKRNKAALTLFWDLNGRNHEITILKLKYIRFRE
                     KYAEGEVPLKVLIKE"
     gene            complement(1553..2146)
                     /locus_tag="VLA74_06200"
     CDS             complement(1553..2146)
                     /locus_tag="VLA74_06200"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSF50336.1"
                     /translation="MCPKVTNQYKENIKNKIIESAISTFSKYGYDKSRMDDIAKTANL
                     SKGTIYLYFKNKEELFNAISERNTNELKIQLSKLFQNSDNDLITRIQNFYEDFNDQGY
                     KMFFEIIAESSRNKILKQLLYQERRKILDIIIDYLKILKEKGYIRKDIEITEIAYGFV
                     SLYDGLKINKLLGIDEDQNKNTWSRIVKTIFTGLNHI"
     gene            complement(2151..>3129)
                     /locus_tag="VLA74_06205"
     CDS             complement(2151..>3129)
                     /locus_tag="VLA74_06205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50337.1"
                     /translation="IKNKHSLTNRPSKISFYLLLIGSVVCIISGPADYLWHQIFGIDG
                     LLSPTHISLMTGMLITSIGVVIGLARIKISDTKTNNKLEILRNIALIPAFAALWFTII
                     WYVYFFSLPFSNGERFNFNPDPYLASIIATLFLPLFGSMIFFIASKTISRFGAVTAIG
                     GLVIIINLFANIIPTDGILFPSILWYFPLSFIPIIIADFLTNNFTFRKRNYKEKSINK
                     IVAAVLLGAVFYIFNYPMIVWAYAIPLNMPLLVNNQELPLMSPQLLSNFSTTLPIMLI
                     ISIPSGAIMSVIGYLITNKMIKPANTNKEGNNINDNSIQINNNNQKIDC"
BASE COUNT         1084 a          437 c          446 g         1162 t
ORIGIN      
        1 ctatataata caagttcatt atcttcaaac cattgcattt ttagtacgtg attagagaag
       61 aacaaatgaa caaaaatttt tcgcacagcc caaataatag caataatatt attgtataaa
      121 actataataa taatagtatg acaaagcagg attctcattc agattcagag ttaaagaaaa
      181 tctaccagtt gaaaaatatt gcagtagttg gtatgtcaaa aaatgaagaa aaggcaggaa
      241 attttgtacc taaatacctt attgaacatg gatataatgt tattccagtt aatccaacaa
      301 tttctgaagt attgggaaga aaatcatatc caacaataac agacattcca gaaagggtag
      361 atgtagtaga catatttaga aaatcagagg atgtacctcc tgtaatagat gatgcactta
      421 acagaaaaga tgacattaag gtgatttgga tgcaggaagg catctacaat gaggaggcgg
      481 agaagaaagc aaaggaaaat ggcatggatg ttgtttacaa taggtgtatg atggcagagc
      541 acagacgtct cttttagaat ataaagacat gaaatagtca gccaacgtga tccacaaagt
      601 gtaacgataa tccatatcat tagataaaaa agatatggga ttagcgaggc tgtaaaggtt
      661 gtcacctttt cctaaacact ttttggtctg acactgaaga ctaatgtcaa tataaaatgt
      721 ctatcattct ttaattaata ccttcagggg gacctcacct tctgcatatt tttctctaaa
      781 cctaatatac tttaatttaa gaatagtaat ttcgtgattt cttccattca aatcccaaaa
      841 caatgtcagt gcagccttgt ttcttttata aggttcatat tttataattg atagtaattc
      901 atctttttcc caaatttcac tttctaaata tggggagatt cttttacttt ttttattctt
      961 tatattaacg aattctggag tttgccaatt ttcatgatca acatcattat cattattgta
     1021 taaccatcta taaaatagtc ttagtctgtt gagataatta ttccaggttg ttatccatct
     1081 tttatctgga tcttcatcat gactgttaac ttttgtatta aggaattcta aaatttgttc
     1141 ttttttgtta atgccataaa atgaaatatc tttacctata aaattgccaa atgctattac
     1201 aacttttaaa ttgttatttt gatgatgttc tgaagaacca ttacttctca tatattcaag
     1261 aaattaattt attatctcta tattctttaa attaggaata ttttgaatct ttcctattgt
     1321 tgtagatagt ttaaatggca ttattctatt tttctccctc ttttattctt tcaaaacata
     1381 gtatcaaatt caagtatatg aacccactta tagaatgggg ccagtgggat gtgaaacaaa
     1441 tttgacctat tttttggtcc cttctaaaga gaaaattttg gatggcaata aaaaacaaaa
     1501 accctaacga tagaataccg catattacaa ctctttgtta ttgataatgt ttttaaatat
     1561 gatttagtcc tgtgaatata gtctttacta ttctagacca tgtattctta ttctgatctt
     1621 cgtctattcc taaaagctta tttattttta atccatcata taatgataca aatccatatg
     1681 ctatttctgt tatttctata tcttttctga tgtatccttt ttcttttaga atctttaaat
     1741 agtctattat gatatctaaa atttttcttc tttcttgata aagtaattgt tttaaaattt
     1801 tattacgaga tgattcagct attatttcaa aaaacatttt gtatccttga tcattaaaat
     1861 cttcataaaa gttttggata cgagtaataa ggtcattatc gctattttga aataattttg
     1921 ataattgaat tttcaattca tttgtattcc tctctgaaat agcattaaaa agttcttctt
     1981 tatttttgaa ataaagatat atagtccctt tactaaggtt agctgtttta gctatatcgt
     2041 ccattctaga tttatcatat ccatatttag aaaatgtaga aatagcactt tcaataattt
     2101 tgttttttat attttccttg tattgatttg ttacttttgg acacattttt ttaacaatct
     2161 attttttggt tattattatt aatttgaatg ctattgtcat taatattatt gccttcttta
     2221 tttgtatttg ctggtttgat cattttattt gtaatcaaat aacctattac actcattata
     2281 gcaccagatg gaattgaaat aattagcatt attggtaatg ttgttgagaa atttgaaagt
     2341 aattgtggtg acattaaggg taattcttga ttattgacaa gcaatggcat attcaaagga
     2401 atcgcataag cccacactat cattggataa ttaaagatat agaacactgc acctaataat
     2461 acagctgcta ctattttatt aatggatttt tccttgtaat ttctttttct aaatgtaaaa
     2521 ttgtttgtta agaagtcagc aataattatt ggtatgaatg aaagagggaa ataccataaa
     2581 atggacggaa ataaaatgcc atcagtgggt atgatattag caaataaatt aataataata
     2641 actaatccgc ctatggcagt gactgcacca aatctactta tagttttgga ggctataaag
     2701 aagatcatag atccaaataa aggcaaaaac aaagttgcta ttattgatgc taaatatgga
     2761 tctggattaa agttaaatct ttctccattt gaaaaaggaa gagaaaagaa atagacatac
     2821 caaataattg taaaccataa tgcagcaaag gctggaatta aagcaatgtt tcttaaaatt
     2881 tctaatttat tattcgtttt agtatctgaa atttttattc ttgctaatcc tatgactact
     2941 ccaattgatg ttattagcat acctgtcatt aaggatatgt gtgtaggact caataaacca
     3001 tcaattccaa agatttgatg ccataaataa tccgctggac ctgaaataat acaaactact
     3061 gaaccaatta ataacaagta aaatgaaatt ttagaaggtc tatttgttag actatgttta
     3121 tttttaata
//
LOCUS       DATIAS010000309         2261 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1963308, whole genome shotgun sequence.
ACCESSION   DATIAS010000309 DATIAS010000000
VERSION     DATIAS010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1963308"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VLA74_06210"
     CDS             <1..533
                     /locus_tag="VLA74_06210"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF50338.1"
                     /translation="TQVLEYEDLNEVILVGHSYGGLVIGGVAEQMPKRIRRLVYLDGY
                     LPEDNKSTFDLIPGLKEVYEKRSMKEQGKEWLVSSFDPTVWGVSNPDDVSWMDSRLCP
                     MPWHTHDQSLRIVNIQAQKIPKSYISCTEYKNFHFMAQRARSQPGWDYHELKTGHDAM
                     ITLPDELVQILESLSK"
     gene            complement(1561..1851)
                     /locus_tag="VLA74_06215"
     CDS             complement(1561..1851)
                     /locus_tag="VLA74_06215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50339.1"
                     /translation="MTNMTANVKPVPDGYHTITPFLIIKDAERVIEFYKKSFNAEERH
                     RMYGPDNKTIMHAEIIIGDSAIMLSEESQEMKSFSPQSVEEIQFGFIYMSMM"
BASE COUNT          822 a          333 c          359 g          747 t
ORIGIN      
        1 taactcaagt attagaatat gaggacctta atgaagtaat attagttggt catagttatg
       61 gaggtttagt tattggtggt gtggctgaac aaatgccaaa aaggattaga cgcctagttt
      121 accttgatgg atacctacct gaagacaaca agagtacttt tgatctgata cctggtctaa
      181 aagaagtcta tgagaaaaga tcaatgaaag aacagggtaa agaatggctt gtgtcatctt
      241 ttgatcctac agtttggggt gttagtaatc cagatgatgt atcctggatg gatagtcgtc
      301 tatgtcctat gccatggcat actcatgatc agtctttaag aatagtcaat atacaggctc
      361 agaagatacc caaaagctat atctcttgta ctgaatataa gaattttcat tttatggctc
      421 aaagagctag gtcacaacca ggttgggatt atcatgaatt aaagacagga catgatgcta
      481 tgattacact tccagatgaa ttagtacaaa tactagaatc attaagtaaa taaataataa
      541 taataataat aatattgtta gaatcatgtt acgattactt cagttttatc taatatattg
      601 aaatgttgtt gagtgattga caatgaaaca ggcacaaaat atatccacct tctagacaat
      661 cttttcaaat agcctaatat ctttcagcaa gaggatttgc agtagcaaat atgacaaaat
      721 aggttagtaa aaataataca attttggata gtaatgtatg tggaggtata acatttaata
      781 acctaaaaca ttctgacgag aagtctctgg tgttcttata cagcaacctg aagttgatcc
      841 taatagaata acagtattaa atcatagcga aggtacagtc ataatactat ctatccatac
      901 gtgtccaaga tgtgcattta taaattctct aggtttcaaa ttttgttcaa aatgtagtta
      961 tcctctaaca cacaagctta tgaagaaatg aaaacagaag aaaacaaaaa ataaaatcat
     1021 tagaagaata tataaaaaga gatacaatca acaaaagaag agatagaaaa taaatttcag
     1081 ttggtctaac aacaacaact ttaattcttt ggataaagac aagaaattca agataatata
     1141 tattgaaaaa aaactttatc ggatataata cctaaattcg aaaagtaata taaattcaag
     1201 taaatatttc tttgtaagga acaaaatcaa gggtcacatt tgttatatct tatttctatt
     1261 gatatttttt tgtaataaaa ttaactatca aaataaaatt tgcagggaaa ttcaattccc
     1321 gttgatagta ttcttctatt tttttctttt attatgtagc ctttttcttt gccatttctg
     1381 cacagaaacc ttctgctgcc tttttaatct catctagaga aaggtctttc ttatgagttg
     1441 ctattgacca ctgatatcca aatggatctt ttaacgatcc aacacggtct ccccagaatg
     1501 catcgttgac tgggtgtact acagtggcac ctgcagatac agcctgatta aaagttgaat
     1561 ctacatcatt gacatataga taaagccaaa ctggatttcc tcaacagatt gaggtgaaaa
     1621 agatttcatc tcttgggatt cctcagataa cataatagca gaatctccaa ttataatttc
     1681 tgcatgcatg atagtcttat tatcaggtcc atacatgcga tgacgttctt ccgcattgaa
     1741 tgatttttta taaaattcta ttacacgttc tgcatctttt atgattagaa aaggtgtaat
     1801 ggtatggtag ccatctggta ctggttttac attagctgtc atatttgtca taattattat
     1861 tactttatta aaaatttcct aaaaagacta aatagaaaat attttaaaag tattctaata
     1921 atttagtttt agtatattag gctatactct catcataaga ggaagaattt gttctgtttc
     1981 gttttaaact acatattacg aattaatttc acatccataa aacttgggat gggtccaaaa
     2041 attatgtcaa atttgtttca catcccactg gccccattgt gatattagtt ctctaattgg
     2101 attcactcga aaataaaaaa aataaggtga atcaagaaaa atagaaatga aaataataga
     2161 acaaagtttg gaagaatcta atgcatattc attatttgta tatacgatta gatcacaagt
     2221 tacaaaagat tactatctta gaagatttct cttagtctct t
//
LOCUS       DATIAS010000310         3555 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1690018, whole genome shotgun sequence.
ACCESSION   DATIAS010000310 DATIAS010000000
VERSION     DATIAS010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1690018"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VLA74_06220"
     CDS             <1..382
                     /locus_tag="VLA74_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50340.1"
                     /translation="CLNLFMMGLLEDKKYLFSHLLSIIVCLYYETYYEKIGKFLKLGN
                     KNEDSELGNIFSYSETNKVKNKRIKERYQRERDPEYLYQKIKEDMLKLERMYKVVKYR
                     KEMEEPYFQGYSLSIPKYELTDLY"
     gene            complement(790..2325)
                     /locus_tag="VLA74_06225"
     CDS             complement(790..2325)
                     /locus_tag="VLA74_06225"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSF50341.1"
                     /translation="MHNLNISNELRQIAKGEVLSDDWSRKFYSVDASHYSLSPEAIIC
                     VKDVHDISEICKKVYSKDISITARGAGTGLLGQSLTSGILMDFTKYMNKIIELEEDHV
                     ILQPGIVKAVLDRELKKINKILPVDPSSSNYCTLGGMIANNSSGIHALGYGSTIDFLE
                     QIQVVYSDGEVNLLSPSKISSFRKNNNDYYKIRKLLKLLSEDVLGLVKLKYPKVTKNS
                     CGYRLDSVIKDNIFNPQKIFAASESTLGLISQARFRILDAPIYKYIVVVGFDDVLEAV
                     KHVPRILKYSPSALELLDSSVIDYENRFLKNNQYVTDKWYKGGSLLLIEFSGDIQRDV
                     DTNFSNCKNELCEYGEIIETSFDSTSTERIWNSRRSALSNVMKITVGSRKPIGLIEDT
                     VVKPNDLFDFLQFLILLYRKYKMDYVLYGHAGNGNIHTRPLIDITDPVQSAKMMQLAN
                     EVFTRVFSLSGTISGEHGDGLGRVDYISRMYGQEVTKIFKTVKTLFDPTNIMNPGKKV
                     SPF"
     gene            complement(3241..3399)
                     /locus_tag="VLA74_06230"
     CDS             complement(3241..3399)
                     /locus_tag="VLA74_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50342.1"
                     /translation="MIKNKKIMGITGMVLAVVGGVAWFFQQHLFAFLLWGGAAYLVLQ
                     LNKRKRNK"
BASE COUNT         1282 a          544 c          478 g         1251 t
ORIGIN      
        1 atgtctaaat ttatttatga tgggtctatt agaagataaa aaatatttat tctctcatct
       61 attatctata attgtttgtt tgtattacga aacttattat gaaaaaatag gcaaattcct
      121 taaattaggc aataaaaacg aagacagtga actagggaat attttttctt attcagaaac
      181 gaataaagtg aagaacaaga gaattaagga gcgataccag cgagaaagag atcccgaata
      241 tctgtatcag aaaataaaag aagacatgct aaaactagaa aggatgtaca aagttgtaaa
      301 atatagaaaa gaaatggaag aaccatattt tcagggatat tcattatcaa ttcccaagta
      361 tgaactgact gatctttact gactagaaaa attggttaaa cagaaatttt accaataaca
      421 tatggaaatt tcgtaatgta ttatatcaga ttagaattag tgataccaaa tatcattgat
      481 tatgaattga tacaaaaaat gtcctaattc aatcgttggt aatcgaagaa tttgtcgtca
      541 ttacgaaata aatgagggca taatactcta ggaatatttc ctctttactc aaacctttgc
      601 agatggttat agggacttta aagacatatg aagacgattt aacaaattaa atttaaaaaa
      661 agggcatgat cacagataac gatattgatg aatctttttt tcttggtcta tagtatggaa
      721 ttactgatcc aaagacattt ttcctgtaga tagaggtatg ttcaaaatgt gtaaaacata
      781 tggtattatt caaaatggtg agactttttt cccaggattc ataatatttg tgggatcaaa
      841 caatgttttt acagttttaa atattttcgt aacttcttgt ccatacattc tgctgatata
      901 atctactcgc cccaatccgt caccatgctc acctgaaata gttcctgaaa gagaaaatac
      961 acgagtgaat acttcattag ctaactgcat catttttgct gattggacag gatcagtaat
     1021 atcgatcaat ggtctagtat gaatattgcc atttccggca tgaccataga gaacataatc
     1081 cattttgtat tttctataaa gcaggattaa gaattgaagg aagtcaaaga gatcatttgg
     1141 cttaacaaca gtatcctcta ttaatccaat aggtttccga ctgccaacag taattttcat
     1201 tacattactg agggcacttc ttctagaatt ccatatacgt tctgtactgg tgctatcaaa
     1261 tgaagtttct attatttctc catattcaca caattcattt ttgcaatttg aaaagtttgt
     1321 atccacatcc ctttgaatat ctccactaaa ttctattaac aataatgatc cacccttata
     1381 ccatttatca gttacatatt gattattttt caggaatcta ttttcgtaat ctattacaga
     1441 actatctagt aattctaatg cagatggaga atattttaaa attcttggaa catgtttaac
     1501 agcctctaaa acatcatcaa agccgactac tacaatatat ttatagattg gcgcatctaa
     1561 aattctaaat cgtgcctgcg aaatcaatcc caatgtcgac tcagaagcag caaatatttt
     1621 ttggggatta aaaatattat ctttaatgac agaatccagc ctataaccgc atgaattttt
     1681 tgtcacttta ggatatttta attttacaag acctaaaaca tcctccgaaa gtaatttcag
     1741 taattttctt attttatagt aatcattatt attttttctg aaagaactta ttttagatgg
     1801 gcttagtaaa ttaacctctc catcagaata tacaacctgg atctgttcca gaaagtcgat
     1861 cgtacttcca taccctaatg catgaattcc acttgaattg tttgcaatca ttccacctaa
     1921 agtacaataa ttactgcttg aggggtctac gggaaggatt ttgttgattt tttttagttc
     1981 tctatctagg actgctttta caattcctgg ctgtaatatg acatggtctt cttctagttc
     2041 tattatttta ttcatatatt ttgtaaaatc cattaggatt ccactagtaa gcgattgacc
     2101 taaaagacct gtacctgctc ctcttgcagt tattgaaata tcttttgaat agactttttt
     2161 acatatttca gatatatcgt gaacatcttt aacacaaatt attgcttctg gcgataatga
     2221 ataatgactt gcatcaactg aataaaattt tctactccaa tcgtctgata acacttctcc
     2281 ttttgctatt tgtcttagtt catttgaaat gtttaggtta tgcaatctag tataaacata
     2341 gaaagatcta atctataaat tatgttaaaa actttcataa atctaattaa atctgcattt
     2401 tatataaaga acaaactgaa aaatatccat atttcaatat ttcaattaaa tattcttaaa
     2461 aatagacaaa tttaatgctc tgttatttag taattaaaga ttatttaaat ctagtaattg
     2521 tggtattatt taaaacgtaa tgaatattag catgtaaaac acatcccact aatatccttg
     2581 taaattgaat aacctataat ttttaaaaat tatatttgct ttttgaattt taaataaaaa
     2641 gagtagatac aagttttttt aagatttctt tacttgctga atacggtata aaatcgttag
     2701 attgagtctg atattaaata acaagaaaat aatgttaata gaaacacata aaaaataaca
     2761 aaaattcttt tatgtgaccg tcttaaataa tttaatagat tatagtcaaa ttaagatcaa
     2821 ttcttaatcg tatagtatat tcttctgtta catcctaaca atcaaatata actatcattt
     2881 ttattctaaa aaactattct aaaagaagac ccgaatattt aatcatacgg tttaagtttg
     2941 aaattaatat gatttattta atgaggatta aatacaataa aaacaaaaga aaagtttttg
     3001 ataaatattt gtatggctgt ccttgttgcc atttatctag atatgtaata ttaagtgaag
     3061 atatccaaga tcccgcctat cacaaatatg agttatactg tcatggttgc aatgtagttt
     3121 tttcgccaat gcacgcagtt ctaccatttg agttcaacaa agataattaa tccatacttt
     3181 atttaagagc ttattgctct aaattttagt aatataaata ttttatagtt ttaccttaca
     3241 tcatttattt ctctttcttt tgtttaactg aagtaccaaa tatgcagcgc ctccccagag
     3301 tagaaacgca aagagatgct gttgaaaaaa ccatgctaca cccccaacta cagctaatac
     3361 cattcccgta atacccataa ttttcttatt ttttatcaat tcaattctaa tagcaaatat
     3421 taaatattaa tatacatttc aacctagtga aaataaacag gatagtaaac caaatcatca
     3481 gataaaaaag agaaatatat acaagaatca atttaaaagc ataggtggaa ttgatttgaa
     3541 tcgatttgca agttt
//
LOCUS       DATIAS010000311         2444 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1009651, whole genome shotgun sequence.
ACCESSION   DATIAS010000311 DATIAS010000000
VERSION     DATIAS010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009651"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1316
                     /locus_tag="VLA74_06235"
     CDS             <1..1316
                     /locus_tag="VLA74_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF50343.1"
                     /translation="IWKQLKENKGKSLPWYFSVAVNRMPAKYLISRSISSKFIDLTNI
                     NEQKLWEEFTNLTEIFLERWKMIRSEEIDIITELNQQKKKISLLDLTVELVKRMLTHC
                     NFCRWNCQIDRSNKQTVTKDDDVISCSPRGKKKHGTCQLESTSKVSSYFHHRGEELIF
                     RGTNGSGTIFFTSCNMRCSFCQNGDISTDKENGIDITPNNLALMIWQLRMEGSHNINW
                     VGGDPTIHLHTIVQAISMLDSFKINWIHNMKDLDYIESVKADKYFSNSHFDSEYAFYK
                     QSIFNSPQLWNSNFFMSNETMNILRILMDAWLPDFKFGPGKCALDLSRTPWYWETVTK
                     NLRLVHEWEEDFVIRHLIMPNHIECCTKPILDWIAKNMPEVQINIMDQYHPDNLCNPM
                     SPKYKDRYKEISRFPKKEEIKRAYKYANDLNLNFKSLSYEKYSLI"
     gene            1470..2054
                     /locus_tag="VLA74_06240"
     CDS             1470..2054
                     /locus_tag="VLA74_06240"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HSF50344.1"
                     /translation="MGLIYLLHIRSKDMSEFDDIIKKRKMIRQYKQDKPIPKEIVDKL
                     IANAHRAPSAGHTQVQEYIIVQDPLIKKKLGESALNQEQVYNAPLLIVVCANTSRSVG
                     RYGKRGREFYSIIDGAFASMLILLTAVNEGIGACFVGAFLDDKVSEILQLPKYVKPIG
                     IIALGFPAEDPGKFKRIDISKLVHYEKYSNQKQQ"
BASE COUNT          955 a          331 c          401 g          757 t
ORIGIN      
        1 acatatggaa acagctaaaa gagaataaag gaaagagcct accttggtat ttttctgtag
       61 cggtaaaccg tatgcctgca aaatatttga tttccagatc tatatcttct aaattcatag
      121 atttaacaaa cataaacgaa caaaaacttt gggaagaatt tacaaatctt acagaaatat
      181 ttttagagag atggaaaatg ataagatcgg aagaaatcga tataataact gaattgaatc
      241 aacagaagaa aaaaatctcc ttattggatt tgaccgttga gcttgttaaa cgtatgttaa
      301 cacattgcaa cttttgtcgc tggaattgtc agattgaccg atctaataaa caaacagtaa
      361 ccaaagatga tgatgtcatc tcttgctcgc ctcgaggaaa aaagaaacat ggtacttgtc
      421 agctagaatc aacttctaaa gtaagcagct attttcatca ccgtggtgaa gaacttattt
      481 ttagaggaac taatggatca ggaacaatat tctttacaag ctgtaatatg agatgctctt
      541 tttgtcaaaa tggagatata agtacagaca aggaaaatgg tattgatatt acacctaata
      601 atttagcttt aatgatttgg cagcttagaa tggaaggatc ccataatatt aattgggttg
      661 gcggtgatcc aactatacat cttcatacta ttgtacaggc aataagcatg cttgactcct
      721 ttaagataaa ttggatacat aatatgaagg atcttgatta tattgaatca gtaaaagcag
      781 ataaatattt tagcaattca cattttgatt ccgaatatgc attctataaa cagtctatat
      841 tcaacagtcc acagctgtgg aattcaaact tctttatgag taatgagact atgaatattc
      901 tacgtatact catggatgcc tggctacctg actttaagtt tggtcctggt aaatgtgcgc
      961 tagatctttc tagaactcca tggtactggg aaactgtaac aaagaatcta agacttgttc
     1021 atgaatggga agaagatttt gtaatacgtc atctcataat gcctaatcat attgaatgtt
     1081 gtactaagcc tattcttgat tggattgcca agaatatgcc agaagttcag atcaacatta
     1141 tggatcagta ccatccagac aacttatgta atccaatgtc accaaaatat aaagatcgtt
     1201 ataaagaaat ttccagattt cccaagaaag aagaaataaa aagagcatat aagtatgcta
     1261 atgatctaaa tcttaacttt aagtcattat catatgaaaa atattcttta atttaaaata
     1321 aattaaataa caataaaatg gacaaattca actaagaatt ctcattataa cagggtttgg
     1381 taacataata tttaagattt tgtaaagttc agattaaata ttattttatt ttagaattaa
     1441 tttaaagtgg tgattccatt ggagaggaga tgggattaat ttatctactt catataagat
     1501 caaaagacat gtcagaattt gatgatataa taaaaaaaag gaaaatgata agacaatata
     1561 aacaagataa gcctattcct aaagaaattg ttgataaatt aattgctaat gctcacagag
     1621 caccaagtgc aggtcatact caggttcaag aatatataat agtacaagat cctttgataa
     1681 agaaaaagtt aggtgaatct gctttaaatc aagaacaagt atacaatgct cctctgttga
     1741 ttgttgtttg tgcaaatact tctagatctg ttggcagata tggaaaaaga ggaagagaat
     1801 tttatagtat aatagatggt gcttttgctt cgatgcttat tttactaact gcagtaaatg
     1861 aaggaattgg tgcatgcttt gttggtgcat ttctagatga caaagtttca gaaatacttc
     1921 aattacccaa atatgtaaaa ccaataggaa taattgcatt aggatttcct gcagaggatc
     1981 ctggtaaatt taaaagaatt gatatttcca agttagtcca ttatgaaaaa tattcaaacc
     2041 aaaaacaaca gtagaaataa tgagttattg taaataaata tcttcatcat attatttctg
     2101 aagaatatct aaaaaataac aaaaggaatc aatgggattt gaacccttct ataaagtggg
     2161 accagttatt gtttaatttc aatacagcaa tttaacaata attgtaaaaa atttatatga
     2221 gaagaggaaa aaaatagaat tgtattttga taggatataa gacaatgaag aaaacactta
     2281 attaatacat gtccatcaat aagatcattc tataaagaac aaatttataa taacattata
     2341 gatcacgaga ttattcacaa gatgtaaaaa acagaaaaat agaaaaacct tggtattata
     2401 ccattaacaa atagtattag gataatttaa ggtagctcca aata
//
LOCUS       DATIAS010000312         4700 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1010589, whole genome shotgun sequence.
ACCESSION   DATIAS010000312 DATIAS010000000
VERSION     DATIAS010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4700
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1010589"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..738
                     /locus_tag="VLA74_06245"
     CDS             <1..738
                     /locus_tag="VLA74_06245"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF50345.1"
                     /translation="KKAEPLHDRFPIVNLDDFLEQKSIDIEEIPQLEKLVESNAKVPS
                     LNIDEQQYQFVLDDLEKTSQNKDIDWIIVMLHKPLYSSISKQLEEYIIRDKYQPIFDK
                     YGVDLVIQGHNHIYTRTLPLSFNESDIGQPIIDQSSTSNNNTVFTNPDGTIFLVVGTG
                     GAELHRIVEEPYYVANQYNKGFGFVDLKIDEKRLDGTFYDISLNCKMEITEKKKKEVM
                     DLESCLPSTTNNNNNNLKIIDRFTIIK"
     gene            1399..1800
                     /locus_tag="VLA74_06250"
     CDS             1399..1800
                     /locus_tag="VLA74_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50346.1"
                     /translation="MSSSSSPFDLSFAQQDNEDDDDDAEEDEDKLVIKTRIQINNLDL
                     ENTKFIRVIGFINGEEAKQDIPISSIDKTKKTLTVDLEVDKDNGIVEADTPDEFFVCA
                     YQVGEVVDGYNSLQENLIVMRVIWLILINQL"
     gene            1773..2231
                     /locus_tag="VLA74_06255"
     CDS             1773..2231
                     /locus_tag="VLA74_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50347.1"
                     /translation="MVNIDKPTVINLFRAGSQVYSTSQAVYQSSLNTDSSSSSNSANN
                     NSNNQVKIKVSAPLSDKKGTEKLIIGVMIKGQIQSEVIEDVQDELDKSKDDTISKTFK
                     FDRNTDIGPIQIGDRFHACVASNDLSPPEGSECEKRIVKNLNKVSGLYAR"
     gene            2520..3896
                     /locus_tag="VLA74_06260"
     CDS             2520..3896
                     /locus_tag="VLA74_06260"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF50348.1"
                     /translation="MNIINLFICTILVFTLCNLVNNGLDIAFGGTEKEPPLINDENLQ
                     ITQFVDKLNFPTGIDFLGENDILVIEKNTGQVKRILNGKTLPEPVLDVNVASESERGL
                     LGITILNTEGLANSDMTTTTTNNENLKEESILDNEGDVKVFLFYTETENVDNGEILGN
                     RLYKYDFIDGKLVNPTLLLDLPFLPGPSHNGGVLDIGPDNNLYLVVGDINREGNPEYL
                     TLSQNIEDSKMPDGRGGVLRITPDGDPVNDGFTLGDEGILDKYYGYGIRNSFGIGFDP
                     VTGILWETENGSNYGDEINVILPGFNGGWRQGLGLSTEYETFKNKEFDKSKLINFNGK
                     GTYYEPVFTWVDTVAPTAITFINSNIFGEEYENDLLVGSVKQGRIFHFNLNETRTGLD
                     LLSPSSGEQLIDKMADVDEELESVTLGRNFGVITDIEISPFDGAIYVVDGQSKNGKIY
                     QIHPKELS"
     gene            4243..>4700
                     /locus_tag="VLA74_06265"
     CDS             4243..>4700
                     /locus_tag="VLA74_06265"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF50349.1"
                     /translation="MVFKTILVPHDGSVMSDKALGKAVEIAKLVKGSKIIIIHVIPEI
                     PTPIFSKEIRSPKTDVRIPFSQYMVFLYEQMESEIKEKLEERKEKYGKSGLDIEIYIT
                     IGKPTDKILKYSTDRKADLVVIGSIGVTGVSKFFKGLGSVSRSVSEKVSCP"
BASE COUNT         1838 a          576 c          758 g         1528 t
ORIGIN      
        1 aaaaaggcag aaccattaca tgatcgtttt ccaatagtaa atttagatga ttttcttgag
       61 caaaaatcaa ttgatataga agaaattcca caacttgaaa agttggtaga atcgaatgct
      121 aaagttccat ctctaaatat agatgagcaa cagtatcagt ttgtactgga tgatttagaa
      181 aaaactagtc aaaataaaga tatcgattgg ataattgtca tgctacacaa acctctgtat
      241 tcttccatct ctaaacaatt ggaagaatat attattagag acaaatatca acccatattt
      301 gacaaatatg gtgttgattt agtaattcaa ggtcacaatc atatttatac tagaactctt
      361 ccactttctt ttaatgagtc agatattggt cagcctatta tagatcaaag tagtaccagt
      421 aataataata cagtattcac taatcctgat ggtactatat ttttggttgt cggaacagga
      481 ggagcagaac tacataggat agtagaagag ccttactatg ttgctaatca atataataaa
      541 ggatttggtt ttgtagatct aaaaatagat gagaaaagat tagatggaac attttatgat
      601 attagcttaa attgtaaaat ggaaataaca gagaaaaaga aaaaagaggt tatggatcta
      661 gagtcgtgtt taccttcaac tacaaacaat aataataata acttgaaaat tatagatcgt
      721 tttactataa tcaaatagac ttaaattttg ccacttcaat aattaccctc tattgttaca
      781 attgtaaatt agttatctat tttcattatc attatttttc tcaagcataa ttataaataa
      841 aaaacaattt aaaacaaaga cattttcata tatgtagaat agaaacagac actgtaacag
      901 attttagcct tactctaaaa atacgacata gacaccatta tgaaaatata aaatataata
      961 atattaaatc caaaagttca gctttgcaac aacaataaca acaataagac tcaaagtctg
     1021 gaaataccct ctctatcatt tgataattca ttttaatcaa tattttctat atatattcta
     1081 caaatttaat aatttcaaat tattttattt gaaatttaac aattaagcag aagaacataa
     1141 ttaacatgag agttatagtt aatgggtttt gcctaaacat gataaaacta ttttttacct
     1201 atcaaattga acatgataag aagttaaagt ttcctaaagt atttatagaa aaaataagtc
     1261 tattctgact aacaatcatt tcgaaaccga tatatataaa attaaatttg ttgttattta
     1321 attatgaaca tcaagaactg ttgcattaag cgtctgcatc tttttattgc catctccttt
     1381 gtaactatta ttttgtttat gtcttcttct tcttctcctt ttgacttgtc ttttgcacaa
     1441 caagacaatg aagatgatga tgatgatgcg gaggaagatg aggataaact agtaattaaa
     1501 actcgaattc agataaataa cttagattta gaaaatacta aattcatacg agttattggt
     1561 tttataaatg gtgaagaggc caaacaagat ataccaatct cttcaataga taaaactaaa
     1621 aaaacactga ctgtagattt agaagtagat aaagataatg gcatagttga agcagataca
     1681 ccagatgaat tttttgtatg tgcatatcaa gtaggtgaag tagtagatgg ttataattcc
     1741 ttacaggaaa atttgattgt aatgagagtg atttggttaa tattgataaa ccaactgtaa
     1801 tcaatttatt tagagcaggt tcgcaagtct attctacaag ccaagcagtc tatcaatcaa
     1861 gtctaaatac tgatagcagt agtagtagta atagtgctaa caataacagc aacaatcaag
     1921 ttaaaattaa agtatctgca ccactttcag ataagaaagg tactgaaaaa ttaataatag
     1981 gtgttatgat taagggtcaa atacaatctg aagttataga agatgttcaa gacgaacttg
     2041 ataaaagcaa agatgataca atatcaaaaa catttaaatt tgacagaaat acagacatcg
     2101 gtcctataca aattggagat agattccatg cctgtgttgc aagtaatgat ttgagcccac
     2161 cagaaggttc tgaatgtgaa aaaagaattg taaagaatct gaataaagtc agtggactat
     2221 atgcaagata gataaaaaaa aagcgtgtaa ttaacataaa ttaaacctcg ttgccaaaac
     2281 aaaaaattac tctcatcgaa tgcactgaaa ttctgtagca gtagatgtta ttccctccct
     2341 tactacatta ctatttggaa agatctatat ttcattttgt tttgataata tacaattagt
     2401 taaatcatat agaaaattgt atttgaactt taataaagta ttataataga atattataaa
     2461 aaatggtctt taattcaata gaaaggaaaa acattgtctt ttctatttac aaatataatt
     2521 tgaatatcat taatcttttt atctgtacta ttttggtttt tactctttgt aatttagtaa
     2581 ataatggttt ggatattgca tttggtggta ctgaaaaaga gccaccattg attaatgacg
     2641 aaaatctaca aataactcaa tttgtagata aactaaattt tccaactggt atagattttt
     2701 taggtgaaaa tgatatttta gtaattgaaa aaaatacagg acaagtgaaa agaatactta
     2761 atggtaaaac cttgcctgaa cctgttttgg atgtgaatgt tgcttcagaa agcgagcgag
     2821 gattattagg aatcaccatt ttgaatacag aaggtcttgc aaattcagat atgactacta
     2881 ccactactaa taatgagaat ttaaaagaag agagtatttt ggataatgaa ggagatgtaa
     2941 aagtattctt attttacaca gaaacagaga atgttgataa tggcgaaata ttgggaaata
     3001 gactatacaa gtatgatttc attgatggaa aattagttaa tccaacactg ctattagatt
     3061 tacctttttt accaggacca tcacataatg gtggagtttt agatatagga ccggacaata
     3121 atttgtacct tgtagtagga gatattaatc gtgaaggtaa tccagaatac ttgactctat
     3181 ctcaaaatat tgaagatagt aaaatgcctg atggacgagg cggagttcta cgtattacac
     3241 ctgatggtga tccagttaat gatggattca ctttaggaga tgaaggaatc ttagacaaat
     3301 attatggata tggaataaga aatagttttg gtattggttt tgatccagta accggtattt
     3361 tgtgggagac agaaaatgga tctaactatg gagatgaaat taatgtaatc ttaccaggat
     3421 tcaatggtgg ttggagacaa ggtttgggat tatccacaga atatgaaact tttaaaaata
     3481 aagaatttga taaaagcaaa ttaattaatt ttaatggaaa aggaacatat tatgaacctg
     3541 tatttacatg ggtagacact gtagctccaa cagcaattac atttatcaat tcaaatattt
     3601 ttggtgaaga atatgaaaat gacctcttgg taggttcggt aaaacaagga cgaatatttc
     3661 attttaattt aaatgaaacc agaacaggat tagatctgct gtcaccatca tcaggagaac
     3721 aattaataga taaaatggca gatgttgacg aagaattaga atcagtgact ttgggaagaa
     3781 attttggagt aattactgat atagaaataa gtccatttga tggtgcaatt tatgtagtgg
     3841 acggacagtc gaaaaatggt aagatttatc aaatacatcc taaggaatta agctagtaac
     3901 gaaaaaaata aatttaagaa ctatttaaag aaatagttac tagatctact atatataatt
     3961 attattatta ttagctttag attaaattaa ctataattat ttcttgatat tagccattta
     4021 attattttgt aaaatgtatt ctattaatag atttaaatct tatatgatag ttatataata
     4081 aaagaattac agcctgagtt aataatcaga taaattaata tatatatttc agattaaatg
     4141 aaattatcat ctttggaaat taatgaatgt tttatcaaaa aaaaaaggac gagatgatag
     4201 aaacttttat ttgaaataaa aaacatccga tattgaaatt ctttggtatt taaaacaata
     4261 cttgttccac atgatggttc tgttatgagt gataaggctt tgggcaaagc agtagaaatt
     4321 gctaaattgg ttaaaggttc taaaataata attatacatg ttattccaga aataccaaca
     4381 ccaatttttt caaaagagat acgatcacca aagacagatg tgaggattcc tttttcacaa
     4441 tatatggtat ttctttatga acaaatggaa tctgaaataa aagaaaaact agaagaaaga
     4501 aaagaaaaat atggtaaatc tggcttggac attgaaatat acattaccat tgggaaacca
     4561 actgacaaga tattaaaata ttcaactgat agaaaagcag accttgttgt aattggtagt
     4621 attggtgtaa ccggagtttc aaaatttttt aaaggattag gaagtgtttc tagaagtgta
     4681 tctgaaaaag tttcatgtcc
//
LOCUS       DATIAS010000313         3172 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_466227, whole genome shotgun sequence.
ACCESSION   DATIAS010000313 DATIAS010000000
VERSION     DATIAS010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466227"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            880..1005
                     /locus_tag="VLA74_06270"
     CDS             880..1005
                     /locus_tag="VLA74_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50350.1"
                     /translation="MSNTSKALVIFRDEKRSYVYVWNWIQRFAESPIYKRKRITA"
     gene            1490..1711
                     /locus_tag="VLA74_06275"
     CDS             1490..1711
                     /locus_tag="VLA74_06275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50351.1"
                     /translation="MTASSTFNSLGIRLCSLRINSVIINEFLISSTSTSGNNDQSSTI
                     VPVTVGCYTIPLITKYLLFGAVLDIYKYK"
     gene            complement(2712..2939)
                     /locus_tag="VLA74_06280"
     CDS             complement(2712..2939)
                     /locus_tag="VLA74_06280"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HSF50352.1"
                     /translation="MDATEQEIQRPAKDKMRKRKITIQARKKKRHTVKTQLMVKKEGK
                     ILYKSNHHYKKGRKHDYTVYKKEQPQKHHHK"
     gene            complement(2953..>3172)
                     /locus_tag="VLA74_06285"
     CDS             complement(2953..>3172)
                     /locus_tag="VLA74_06285"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HSF50353.1"
                     /translation="TVRDRFLMLLMYYRLYITHTLSGFLFDLDQSNVYRDIRHIEPLV
                     KRCIPLPQKLYNITRRLRTVEEVKKVLC"
BASE COUNT         1011 a          479 c          436 g         1246 t
ORIGIN      
        1 tttgtggatc attcattaat gttaaattaa atccttcatc atctaaccat tttttgtatt
       61 ttgaagaagt tttaacatca tcatcaatta ttaagatatt tttcattgtt taataaagta
      121 taactggcat tacaattaat caattctgaa aaatttttat gttaatgaat ttctataaaa
      181 ttttttctat atcttgcagt tatggaggat aagactatga caataatttg ctaattgttt
      241 aattaattaa attttcctca attttttaaa tatcataatg ttatatacaa tcaaatacag
      301 gattcacaaa tcataccgta gccttctatt atgcagtggt attcatgata gagggctatg
      361 gctactacta caattactat taatttattt caaattacta aataaaatgt taagtatata
      421 ttataaccat aacgacagta gcatacaacg acataaaaaa atacaaacct caaatctact
      481 acagtagccc agtagccata gcctaataat aaataataac atccatgggt ttagcaaacg
      541 gcataggcta tggtttcaat atcttaaaat tttaaatatt ttgatagtgt attatactag
      601 tactaatata taggaagtag cactacacca tagtcctctt cattctttcc aattgctcct
      661 attacttgag ggctatggtt ttattcttgt atttttgtta ctatatttat agtgtttaat
      721 gcatatttaa tctatgcatt tacataactg ttaacttaac gatatagatt tagctgtgaa
      781 tgtcatgttc tgacttgtat gttaccagga tttgtcagga acagaacatc cactattgta
      841 gtcatgtatt ctttgtatat gtattttctt ggtctccgtt tgagtaatac atcaaaggca
      901 ttagtaatat ttcgagacga gaagaggagt tacgtgtatg tatggaactg gatccagaga
      961 tttgcagaat ctccgattta caaaaggaaa agaataacag cataaatcat agatgaaact
     1021 gttatccagg ttggaatcca gcatttctag ttatggttat gtagaacccg tacacagttc
     1081 tgtgcttgga attttcctat cagaagagag aaaatgcttg ttgctgaaaa gttcattaga
     1141 tcattaattg acaaatacgg aaaacacact gtatatacag atggtggaac gtagtatcca
     1201 gaagcatgta atgtattggg attgaatcat tatttacatt ctcctttaga gaaatgtctg
     1261 atggagcgag tcaaccagta tttcaaggac aggatcgaga gtttagatga ttactatccg
     1321 tgtatgcaag gtgaatgcaa tctatttcat gtaaataact tgttacaatt ctttgttttc
     1381 atgtataatg atacgacatc taagaataat tattttatta tccagttaaa acaatgaggt
     1441 gaatttacct taaattaaca cagccttgtt aactgaatta ttttaatatt tgactgcatc
     1501 ttctacattt aatagtttag gaattagact atgtagttta cgtatcaatt cggttatcat
     1561 taatgaattc cttatttcct ctacttctac atcaggaaat aatgaccaaa gtagtacaat
     1621 agtgcctgta acagtgggct gctacactat cccactcata accaaatatc tactatttgg
     1681 agcagtactt gatatctaca aatacaaatg atgtattaat ctaacgaaat ggtataaatg
     1741 cgaatcttta atatataaag actatcataa aaagatatat aatagatctt ttgcgtaatt
     1801 aggaaggaat caaaatattc tgaaaatata actaattttt ataaatttta taaatttaat
     1861 aatattattc tcttctatct tagatcaaat atgtaatatt ttatattgtc gctaattacg
     1921 caatagatct aatgtatagt tagaagattt tcatatcgtc agagccttag ccataataat
     1981 ttttaattat aaatatcatc tcattttgtt ttctaattga tatgtttaac tataaaaata
     2041 gactattact attgctcaat aatattttta atattgagat attcataaat agtaattttt
     2101 ccctttgcta acctagcatt caaaatttca atataataat gatatgttag tttcattact
     2161 atttaatgaa ttactaatta gtgtcgtatt agtattttta tcctaattct cttttaaaca
     2221 ataatgttat ttgctattgc acaagaccaa gatagttctc ttgcttcttc tgtttataac
     2281 atgtaaataa ttttctaaat ttattaagtt atgattttct tctctctgtc aacaatctat
     2341 ccttttgttg ttttatatta gatctcttgc gcagttacaa tagatctaca tcttattctt
     2401 aatcctgata tatccagtta cggtgataca ctattcttca ttatcctgta gttcacaaga
     2461 ccagatagaa tgtctgaaat atgatcatat cttttcagtc tgttcctata ttttgtaccc
     2521 aatatacaaa atttctttat cctgcagata gtatgcatgc tctattataa ctcgcaggct
     2581 agaatgattt ttgttatact ctttttcttc cttagttagt tttatatttc ttatcttatt
     2641 tagtggtaga ttatacttta cagtaggaaa gtctttttca catcttaaat atcctaaatc
     2701 aactacgttc tctacttgtg atggtgtttt tgaggttgtt cctttttgta aactgtatag
     2761 tcatgttttc ttcctttctt ataatgatga tttgatttat acagtatctt tccttctttt
     2821 ttgaccatca attgtgtctt tacagtatgt cttttcttct tccttgcctg aatagtaatc
     2881 tttctttttc tcatcttgtc tttggctggt ctttgtattt cctgttcggt tgcatctata
     2941 aatgccttga attcagcaaa gtactttttt tacctcctct acagttctca atcttcttgt
     3001 aatattgtat aacttttgag gtaatggaat acatctttta actagtggtt ctatgtgtct
     3061 tatgtctctg tacacattac tctgatccag atcaaataga aatcctgaaa gtgtatgtgt
     3121 tatgtacagt ctgtagtaca taagaagcat gagaaatctg tctcttactg tc
//
LOCUS       DATIAS010000314         2438 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_738533, whole genome shotgun sequence.
ACCESSION   DATIAS010000314 DATIAS010000000
VERSION     DATIAS010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_738533"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VLA74_06290"
     CDS             <1..342
                     /locus_tag="VLA74_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50354.1"
                     /translation="AIGSIEDLKKLTTPEGPPPKTSNDTTPLLQQLGKESGTDNQTGG
                     QQQQQDNQTGGQQQQPSEQGQQPEGNQTAGTAGGQQQQEGNQTGQGQEEGNQTGGPLG
                     EVGEAIGKLFQ"
     gene            670..975
                     /locus_tag="VLA74_06295"
     CDS             670..975
                     /locus_tag="VLA74_06295"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50355.1"
                     /translation="MNPKYRSRIEIISSILEASVGGVKKSKVMCRSFVSNTQFKNYMN
                     HLIEKNLLSIDSEGKLTITTKGLDFLDHYHALENMLDLTIQKQYIKNDAYSNYLLST"
     gene            complement(1101..1256)
                     /locus_tag="VLA74_06300"
     CDS             complement(1101..1256)
                     /locus_tag="VLA74_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50356.1"
                     /translation="MFVIAYNETREHGGIQGYTLSEMFLMKGTRLNNSSNNKKVKQIK
                     SITYAGR"
     gene            complement(1332..1454)
                     /locus_tag="VLA74_06305"
     CDS             complement(1332..1454)
                     /locus_tag="VLA74_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50357.1"
                     /translation="MHDNGKQFKSKIFRHFLQRNNIKDKSIPARYPQLQGKIEA"
     gene            complement(1691..1984)
                     /locus_tag="VLA74_06310"
                     /pseudo
     CDS             complement(1691..1984)
                     /locus_tag="VLA74_06310"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
BASE COUNT          850 a          367 c          322 g          899 t
ORIGIN      
        1 gctattggaa gtatagaaga tttaaaaaaa ctgacaactc ctgagggtcc ccctcctaaa
       61 actagcaatg atacaactcc ccttttgcaa caattaggga aagaatctgg aacagataat
      121 caaacaggtg gacaacaaca acaacaagat aatcaaacag gtggacaaca acaacaacca
      181 agtgaacaag gacaacaacc agaaggtaac caaacagctg gaacagcagg tggacaacaa
      241 caacaagaag gtaaccaaac aggacaagga caagaagaag gtaaccaaac aggaggtcct
      301 cttggtgaag ttggtgaagc aataggaaag ttgtttcaat aaatttcaaa aataattatt
      361 ttttttgaat cactatcact attattatta tagcgcttag ctcataatag aagaatatag
      421 taattagctt aaggttatag aatataactt aatataaaat ttgattataa aatactaata
      481 attacattat tatgatgttc ctgtccaaaa acaagaaaat ttaagtatat aaaataaata
      541 acatatattc aaaattttct ttttattcca aattatacat atgttaaaaa agcaaattta
      601 tagatataga tatgatttaa taatccacag ttctaaattc attatatagt tttttgtcaa
      661 tgaattattg tgaatccaaa gtacagaagt agaatagaaa taatttcctc aatacttgaa
      721 gcatcagtgg gaggtgtaaa aaaatctaaa gtgatgtgta gatcatttgt ttcaaatact
      781 caatttaaga actatatgaa tcacttaatt gagaaaaatc ttttaagtat tgattctgag
      841 gggaaattga caattactac caagggttta gactttttag atcattatca tgctcttgaa
      901 aatatgcttg atcttactat acaaaaacaa tatataaaaa atgatgcata ttcaaattat
      961 cttttatcaa cataattgat taatctttaa caattttata tacctcaaaa agggtgttag
     1021 tgaagaagat attattcaat taaaaaatat tggtaaaagg gattacttaa ttgttgtact
     1081 tgcacagata ggtaacagat tcacctaccc gcataggtaa tactttttat ctgcttaact
     1141 ttcttgttat tactggaatt atttaatctt gttcctttca tgagaaacat ttcagataga
     1201 gtatagcctt gaataccacc atgttctctt gtttcattgt atgctataac aaacatagaa
     1261 tacaatcttt ttccttctat actagaaata ttttcaactg ctagaaactc attttttact
     1321 atcttgttgt attatgcttc aattttcccc tgtagttgag gatatctggc aggtatggat
     1381 ttgtctttaa tgttattacg ttgtagaaaa tgtctgaata ttttagattt aaactgttta
     1441 ccattatcat gcattacttt ttcaggtttg tcattctcta caatctagtc ttcaagtaca
     1501 tctagtacgt ctacactctc tttttctttg agaccaatca cttgatgttt tccttgaaca
     1561 gtcatcttcg caactaataa catagttctt ttgagtagaa ttctcaatgt aaaacggtcc
     1621 taaaatgtcc atctgtaaca tctgatttgg ttttttcatc tgaaaccttt tccattttct
     1681 atttctgatt ttacatttca atatgttcag accatgtctt ttcagtacct tgtagatagt
     1741 ctttgtactg tgatatctcc ttcaagcgtt ttagtctgaa tctaatgcga taacatccaa
     1801 atctttttgt tatacataaa tccagtattt cctgttctat ctcatttgtt acttttccgg
     1861 gttgaatatt gtgtggtatc ctgctcttat cctgtaaacc aattacacca tttttcaaat
     1921 acctattatt ccatttgtag tatgtttttc tggatatgtg atatctgtta cagatattag
     1981 ttacagtatc tccagctgtc cattatttct tatgaattaa attaaattaa attaaatttt
     2041 atttgtaatt ctatttttca tacacttcct agcagactag caagaagtgt tacctatgtc
     2101 agtaaatgaa attgtaacct aggtatgtaa gtacaacact ttaattaaac gtaattgtta
     2161 gtacattgaa aaatatttta acaaaataca gatgttatag tattaaatta aaattatata
     2221 gttaaaagat gatacaaagc ttttttaata taaaataatt gttgttatca tcttgtaaat
     2281 ttctaaatta aatatcctaa taacaaatat taattatttc agatcccgta tattcttata
     2341 tccctttttt gattttgact tttcttcttc ttcctctttt aaacgaattt tttcatttga
     2401 aaagttggtt ttatttttac catatttagt attaaatt
//
LOCUS       DATIAS010000315         3747 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_466933, whole genome shotgun sequence.
ACCESSION   DATIAS010000315 DATIAS010000000
VERSION     DATIAS010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466933"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..1128
                     /gene="radA"
                     /locus_tag="VLA74_06315"
     CDS             61..1128
                     /gene="radA"
                     /locus_tag="VLA74_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair and recombination protein RadA"
                     /protein_id="HSF50358.1"
                     /translation="MEKESKSNGSIAIIDLDIQDIEGVGPTTARKLKDAGIVSVMDLA
                     VSSAEELSESINATKETAASFIIAAQKLLRETNVLDKEFVTADAALQKRRSMLRCSTG
                     SYALDDLLLGGIETQAMTEFYGEFGSGKSQVCHTLCVMAKQPIEAGGLESSVIYIDTE
                     GTFRPERVEQIARSRGFDPTEILKNVAVCKVYNSSHLELIVKDLGKYIDDFKAKLVVI
                     DSIISLHRAEFSGRGTLADRQQRLNNMLHKLIRLAEIYNIAIVITNQVQSSPDTFFGD
                     PTKATGGNVLGHASTYRIYLRKSGENRVAKMMDSPYHPYSDTRFTVTERGADDIEEQT
                     TKKGNKKTSKKNEIDNEEEDE"
     gene            complement(1148..1420)
                     /locus_tag="VLA74_06320"
     CDS             complement(1148..1420)
                     /locus_tag="VLA74_06320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50359.1"
                     /translation="MNISLIIKLGAVAASIGTISLIIFAITLLAFPVIKECNSDIKCI
                     YFSEAPYPLNLLIQPILLLTVLLVISVGITMIRFGKWYSNRKLSYQ"
     gene            complement(1469..2089)
                     /locus_tag="VLA74_06325"
     CDS             complement(1469..2089)
                     /locus_tag="VLA74_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50360.1"
                     /translation="MNECNMQSISNNKLFFIYVARNEEWERLQSEDWHYVSSMVNFFH
                     WWAKKYFHINFSIVADILPIIPGKLFDRASLGYLLRDHQERGKSVYHFYLSYFKPFWS
                     DCHVDGYATNNFGMLYWIRPNKIISDEQRSKFFADFNCARISHILLHEILRIKGKTKK
                     EYFDKVHDLWDEHTYKELPFLYYNNHFSKVAQDNYYSFVTMDISKL"
     gene            2426..3298
                     /locus_tag="VLA74_06330"
     CDS             2426..3298
                     /locus_tag="VLA74_06330"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HSF50361.1"
                     /translation="MRDVESIINDWKTDVVEPIIKVNDLNKITNSALQLSKILYDDDL
                     DLEKNLHDIRLLQRELNDKVKERSKKEIVNRPTQIIEIINEFMFKEKEFRSNIHDYQN
                     PMNNFLNVVLQKRIGIPITLSIIYISLGNSINFRLYPINFPGHFLVKHILDENRNEII
                     IDPFNQGRIMDDYSLKNILDRFFPYQKILVTKSLLEKTTLSHVMIRLLNNLKESFFEI
                     QEFERLNIANEMILCIDPQNSHAIRDKGIILYDKNPQKAEELLIKYLELEPEANDADS
                     ILNTIKNLRGRKDF"
     gene            complement(3384..3548)
                     /locus_tag="VLA74_06335"
     CDS             complement(3384..3548)
                     /locus_tag="VLA74_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50362.1"
                     /translation="MTRNKYDLSLTEEELQTIMDSLSNTVFNEEIKQDTRKNAKNLFI
                     KLQNDFSILK"
BASE COUNT         1460 a          510 c          568 g         1209 t
ORIGIN      
        1 ctccctctcc ctcttaggtt actgtatata ttaatatgag aaaattttag aatgacgtat
       61 atggaaaaag aatcaaaatc taatggaagt atagcaataa tcgatcttga tattcaagat
      121 attgaaggag ttggtcctac aacagctaga aaattgaaag atgcaggtat tgtttcggtg
      181 atggatctag cagtatctag tgcggaagaa ttatcagaaa gtattaatgc tacaaaagaa
      241 actgctgctt cttttataat agcagctcaa aaattattaa gagaaacaaa tgttttagat
      301 aaggaatttg ttaccgctga tgcagcatta caaaaaaggc gatcaatgtt aagatgctca
      361 actggatcat atgcattaga tgatctgtta cttggtggaa tagagacaca agccatgact
      421 gaattttatg gagaatttgg ttcaggaaaa tcgcaagtat gtcatacatt atgtgttatg
      481 gcaaaacaac caatagaagc aggaggttta gaaagcagtg taatatatat tgatacagag
      541 gggacgttta gacctgagag agttgaacaa atagctagat caagaggatt tgatccaact
      601 gaaattctga aaaatgttgc tgtttgtaag gtttataata gttcacatct agagctaata
      661 gtaaaagatt taggaaaata tattgatgat tttaaagcaa aattagtagt aattgatagt
      721 attatctctc ttcatagagc agaattttct ggaagaggaa cattagctga tagacaacag
      781 agactaaaca atatgctaca taaattgatt agactagcag aaatatacaa tatagctata
      841 gttataacaa atcaagtaca atcatcacca gatacgttct ttggtgaccc aacaaaagct
      901 actggaggta atgtgcttgg acatgcatct acatatagaa tttatctaag aaaatctgga
      961 gaaaatagag tagcaaagat gatggattct ccttatcacc catattcaga tacaaggttt
     1021 actgttactg agagaggcgc cgatgacata gaggaacaga ctacaaagaa aggaaataaa
     1081 aaaacatcaa agaagaatga aatcgataat gaagaagaag atgaataata ttttttgaaa
     1141 cattttttta ttgatatgat agctttctat ttgaatacca ctttccaaac ctaatcatcg
     1201 ttataccaac tgaaataaca agtaagacgg ttaataataa aattggctgg ataagaagat
     1261 ttagtggata tggtgcttcg gaaaaataaa tgcatttaat atcactattg cattctttaa
     1321 taactggaaa tgcaagtaat gtaatagcaa aaattattaa ggaaattgtt cctattgatg
     1381 cagctactgc gcctaatttt attatcaggg atatattcac agagaaaatt gatagtaaat
     1441 ttagaattcc ttcttttaaa ctttagtatt atagctttga tatgtccatt gttacaaagc
     1501 tatagtaatt gtcctgtgct actttggaaa aatggttatt ataatacaaa aaaggaagct
     1561 ctttgtaggt gtgttcatcc cataaatcat gaaccttgtc aaaatattct tttttagtct
     1621 tacctttgat cctcaaaatt tcatgtaata atatatgaga tattctagca caattaaaat
     1681 cagcaaaaaa ttttgaacgt tgctcatctg aaattatctt gttaggcctt atccaatata
     1741 acattccaaa attatttgta gcatatccat caacatggca atcactccaa aagggtttga
     1801 aatatgacag gtaaaaatga tagacggatt ttcctctctc ctgatggtct cgtaagagat
     1861 aaccaagtga agctctgtca aataattttc ctggtattat ggggagaata tctgcaacta
     1921 tactaaagtt tatatgaaaa tatttttttg cccaccaatg aaagaaattt accatggaag
     1981 agacataatg ccaatcttcc gattgtaatc tttcccattc ttcatttctt gctacataga
     2041 taaagaataa tttattattt gatatcgatt gcatattaca ttcattcaaa aaagataaaa
     2101 tcaaatatgg ttggattttg aacatccgca gttgcaatta ttactacctt caaacaattt
     2161 tcccatttta aattgtgaat agtaatacga tttgtgcata cgtttcatca attcagaatc
     2221 agaattaaaa ctacctacac aagcaataca attttttaga acttttaacc catccataca
     2281 aaaatattat tggaaaatat aataaaaaac atttctatcc aatgaaaatt ataagataac
     2341 aattataaac acacttaaat tttagtttat gacaacctaa aatcaatcat aattatatta
     2401 aagatatcct attaataata gatcattgag ggatgttgaa tcaataatta atgattggaa
     2461 aacagatgta gttgaaccaa ttataaaagt aaacgatctt aataaaatta cgaattctgc
     2521 attacaatta tcaaaaatat tatatgatga tgatctggat ttagagaaaa atcttcatga
     2581 tattagactc ttgcagagag aacttaatga caaagtaaaa gaaagatcta agaaagagat
     2641 agtaaataga cctacacaaa taatagaaat aattaatgaa tttatgttta aagaaaaaga
     2701 atttagatca aacattcatg attatcaaaa tcctatgaat aatttcttga atgttgtatt
     2761 gcaaaagaga ataggaattc caattacctt atcaattatc tatatttcac tgggaaattc
     2821 aattaatttt agattatatc caattaattt tccaggccat ttcttagtta aacatattct
     2881 agatgaaaat agaaacgaga tcataataga tccattcaat caaggaagga tcatggatga
     2941 ttattcacta aaaaatatac tggatagatt ttttccatat caaaaaatct tggtaactaa
     3001 atcattacta gaaaaaacaa cactttcaca tgtaatgata agattactta ataacctgaa
     3061 ggaaagtttt tttgaaatcc aagaatttga gagactaaat atagctaatg agatgatatt
     3121 atgcatagac ccccaaaatt ctcatgcaat aagagacaaa ggaataattt tatatgataa
     3181 aaacccacaa aaagcagaag aattactaat taagtatctc gagctcgaac ccgaagctaa
     3241 tgatgctgat tcaattttga atactatcaa gaatttgaga ggcagaaaag atttttaatt
     3301 tatcgatatt tgttacaaaa tgcacaatta tttatactaa atgaatgaat agttttagtt
     3361 acttttcaac attttacaaa aaattatttt agtatggaaa aatcattttg tagtttaata
     3421 aacaaatttt tcgcattttt tcgtgtatct tgtttaattt cctcattaaa tacagtatta
     3481 ctaagtgaat ccataatagt ctgtagttct tcttcagtta aggaaagatc atatttattt
     3541 ctagtcatat ttttcataac tcagcataaa gaagtataaa ttctattctt tatatgatac
     3601 aatacaaaat aattcaggct gggttataat tattttttta ttttattttc acaagaaata
     3661 aagctatttc ttggaggatg atgtttggtg aaaaacaatc atgctaacca ataaaccagc
     3721 acaaaataga tcaacagcag aatttac
//
LOCUS       DATIAS010000316        13413 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1148009, whole genome shotgun sequence.
ACCESSION   DATIAS010000316 DATIAS010000000
VERSION     DATIAS010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 13413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13413
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1148009"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            967..1260
                     /locus_tag="VLA74_06340"
     CDS             967..1260
                     /locus_tag="VLA74_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor eIF-1A"
                     /protein_id="HSF50363.1"
                     /translation="MNEAELKELVMPHEGEMFGRVIKLVGGDNVIVKCTDGKIRTCRI
                     RGKIKRRMWIRENDLVLLAPWDFQSEKADIIWRYIAAHADKLEQDGHLQGLNK"
     gene            complement(1335..2162)
                     /gene="hisF"
                     /locus_tag="VLA74_06345"
     CDS             complement(1335..2162)
                     /gene="hisF"
                     /locus_tag="VLA74_06345"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HSF50364.1"
                     /translation="MTLAKRIIPCLDVDNGRVVKGIKFKEVKDAGDPVEFANRYTQQG
                     ADELVFLDITASQQRREIIKKVVRNVARVIDIPFTVGGGIKRLEDARDILLSGADKVS
                     INTGAVKNPELITELMSIFGRQCIVVAIDVKKKYNDLDTKKKNIINEYDKNNNLIKKY
                     WFEVRIYGGKEGTGIDAIEWAQEVEKLGAGEILLTSIDADGTEEGYDLKLNDVICKTV
                     SIPVIASGGCGKAMHMLEVFKKTNVDAALAASIFHYEKSTINKVKRFLKRNNIHVRI"
     gene            complement(2166..2888)
                     /locus_tag="VLA74_06350"
     CDS             complement(2166..2888)
                     /locus_tag="VLA74_06350"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]
                     imidazole-4-carboxamide isomerase"
                     /protein_id="HSF50365.1"
                     /translation="MKIIPAIDILEGKVVRLIKGDPQNKIVYSDNPIEIAKNFESYEV
                     DRIHVVDLDATLRTGWNDNKNNKDIVLKIIESVKIPVQVAGGIRSFEAINEMLYGNAE
                     KIVIGTLAYKQPNVFQQVPKEKLEKIIVSIDQNKGIVMIDGWRRPSGFKVSEAVKLFM
                     AKGIKEFLLTTVERDGTLNGPDINMLSYASNIFGSKIIASGGISSVEDIIRVKNIGCS
                     AVILGKSIYDGKIDVKKARTVV"
     gene            complement(2885..3505)
                     /gene="hisH"
                     /locus_tag="VLA74_06355"
     CDS             complement(2885..3505)
                     /gene="hisH"
                     /locus_tag="VLA74_06355"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HSF50366.1"
                     /translation="MSNIAIFDYGAGNLYSLKCALERNGAKHVSIIKTLKNVNRYNGL
                     ILPGVGNFDPAIRSIEPYRENFCDLIDRKIPVLGICLGMEMLFKKSEEGELEGLRIFD
                     GNVIMLPKKKVKIPHMGWNNLDITNKDSKILSGIENEAWAYFVHSYYIVPVNKDIIVA
                     KSIYGKDIPVVIEKDNIFGTQFHPEKSGNNGEKIIKNFLNVCDNKK"
     gene            complement(3509..4126)
                     /locus_tag="VLA74_06360"
     CDS             complement(3509..4126)
                     /locus_tag="VLA74_06360"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HSF50367.1"
                     /translation="MNSDSPDTNVSYMRHMKKERNTKETSIKVEVNIDGTGLVNIKTG
                     YPFIDHLVSTFGKHSMTDINLEAKSNDKISHHLIEDVAITIGQAINNALSDRTKISRF
                     GYATIPMDESVAVSSIDLVKRQYSKLSLGLARKEVEGIPKEDLEHFVDSLLQNINGCI
                     HVYVEYGDNDHHKIEAAMKAFAVAFRMAAKIDPKQTDIPSTKGVM"
     gene            complement(4142..5191)
                     /locus_tag="VLA74_06365"
     CDS             complement(4142..5191)
                     /locus_tag="VLA74_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSF50368.1"
                     /translation="MYNKITETDFISSNTKYNNIRVTSIIVDIDGVLIDVRRSYNEAI
                     KKTTRFITNHLKKYCSKNIISDNIISRFRQSGGFNNDTDTSYAITLTLLLNSNLQNDD
                     LKRFLLRTAENSDDCGIISVEKFLKKSLNYSSKKLSEKNDLDFDKIRKYLNYPGPVGK
                     SIVSTVFDEFFYGQKLFRMKYGFDTIYYFGKPLIENDKIIITNKTIRALSNKFDGKIA
                     MVSGRSKIAAKFSLQRKFILLNGNKSIFLEDEKRRYAKPNPHGLIRVMKCMDFSDDII
                     YCGDSIEDSIMAKRAEREVNLTKRKKGERRKVFFCGVYGCSTNQQELINKFKDKNADF
                     IIKSINNLPNVLNKV"
     gene            complement(5184..6266)
                     /locus_tag="VLA74_06370"
     CDS             complement(5184..6266)
                     /locus_tag="VLA74_06370"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSF50369.1"
                     /translation="MQNWLEKRFNELVKIEAYIKPKKNDGIKLDSNENLVLKSDFIRD
                     IALKVSKEVDLREYPLQQVEDFYMALSQYTKISKKYLSIGNGSDQIIDLVLSIFGKKN
                     RVTTFTPTFTYFVDRCKLYSVTVDKVPLQKEDNSLDKPEFIKSAKKSQIIYICSPNNP
                     TGNQIEKGQLLEIINQLDDKLIIIDEAYVEFANYSIAANIIKKDNVIVLRTLSKAVGL
                     AGARLGYCISNEKFTNIFKSLIQSPYPINTLSLCIGTEILKNSDYIKDVVKVIKKERK
                     CIYNHLKSTKNRIRVFKSDANFIFIQIIDIDKYITILETLEKEKIRVKALGKIEGREG
                     RYIRVTIGTKEMNDRFLKVLHKVYNV"
     gene            complement(6281..7600)
                     /gene="hisD"
                     /locus_tag="VLA74_06375"
     CDS             complement(6281..7600)
                     /gene="hisD"
                     /locus_tag="VLA74_06375"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HSF50370.1"
                     /translation="MIKKIVIKNPKDDVENIRYNTIDNFSEDIIKKVGEIICNVRKDG
                     DHALKKYTYEYDRVMVDSIRVNKDEIKDAYKQVTDKQVKTIYKIRETLIENDIIFLEH
                     IKKISSLYSNNRRIKRFVQPISSVGCYIPGGLARYPSTLVMCATPAKLAGVKRLVAIS
                     PPQKNGNVDPLTLVAADICGINEFYKVGGAQGIAALAFGTHSIKSVDKIVGPGGIFVT
                     MAKLLVSNKVSIDMMAGPTELVIYASSETNPRYVALDLVSQAEHSKDTLCGVVTNSLE
                     FADKVQNEVNKILKKNISRKEFVSESLNKNGFIAIAENDDLAIDFVNEIAPEHLQIMS
                     IKELNISRKINSAGLILIGENTPSSASDYCLGSNHVLPTMGFGKSRASLSVLDFIRFS
                     TIIKSNKNDLKKIEPFIKTITQEEGLVNHYEAVKERLIDISQTRKKK"
     gene            complement(7601..8584)
                     /gene="hisG"
                     /locus_tag="VLA74_06380"
     CDS             complement(7601..8584)
                     /gene="hisG"
                     /locus_tag="VLA74_06380"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HSF50371.1"
                     /translation="MPAVVKFAVPKGTIEEATFKILEEAWQKVSGKSRTYRIKLSDPE
                     IEVKLLRPQEIPTYVQEGLYDIGITGKDWIKEARADVKILLDLEYGKVKQVIAIPENF
                     QFNNLDDMIAEYAKNKKPLRISSEYLTTIADHIKSNSAYKKYFGDNDPMIITPWIRIG
                     ENKNVEIFLSFGATEAKPPEDVDAICDITETGTTLVQNNLKIIDTIMESSSVVIANKQ
                     SIQDDKKREKIIDMIALLRGVVEARKKLHIFVNVKKENLDELLGRLPALKRPTISALS
                     EEGWYGVNTIIDKNEFIKIVPVMRKIAQGLVVLQPTQILPFEEIKIDKEDG"
     gene            complement(8637..9962)
                     /locus_tag="VLA74_06385"
     CDS             complement(8637..9962)
                     /locus_tag="VLA74_06385"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004420 - hydroxymethylglutaryl-CoA
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0016054 - organic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HSF50372.1"
                     /translation="MKNGKMQRNDNSFKKFYELDLDERLDFIQNETKIKKKDLQLLKD
                     MPKNFSFNKINNMVENAIGIIPIPLGIATNFVINGKKYLIPVSTEEPSVIAAASKAAK
                     IAKMAGGFIAEADESIMIGQILLVARKRNHKDLFVSKKERERVRKIITDNKEELLKIA
                     NLKSRTVVAKDIQVREILDESINNMGYMIIIELIVDTKDAMGANVINTMCESIAPKIE
                     KLSNGEVVLKILSNYSVNRLARCKATFPKEMIGGSEGVNRILLAYAFAYSDTFRAVTH
                     NKGIMNGIDALAIATGQDFRALEASIHAYAARDGKYRSLTKWYKSKDGDLIGEIEIPM
                     AIGIIGGIISVHPIVKVVLKILDIKNVKELASIFAAIGLAQNFAAIRALANEGIQKGH
                     MKLHARNIALTAGAEENQVNIIAERLIKEKNVSVSKAKEIIELLNSNRI"
     gene            complement(9970..11079)
                     /locus_tag="VLA74_06390"
     CDS             complement(9970..11079)
                     /locus_tag="VLA74_06390"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF50373.1"
                     /translation="MDKRLFIIAIFVAMVGIVTILMTPSDTNIPLPEPESLLNKTGSN
                     KGIEIIAENLDSPWAIETSKDNRIFFTERDGKIRTIGTNGNILDEPVAFIRVEQKGGS
                     GLLGIVLHPNFTENHLMYIYHTYTNGNELFNKVLLLKEKDNKIIDSKIIIDSIPGSLY
                     NNGGRIKIGPDNKLYIPTGDASKPHLAQNLSSLAGKILRVNLDGTIPEDNPFKNSSVY
                     SMGHRNIQGISWHPENKSMYVSEHGPSGFDEINLIIAGKNYGWPNVKCEGTKDFEKAI
                     FCFNPAIAPSGITFASSNKLGYKNDLIVTSLKGSHLRQIDIDSHEQNNVLVGYGRLRD
                     VVEGNDGSLYILTSNTDGRGIPQDNDDKILKILKP"
     gene            complement(11179..11302)
                     /locus_tag="VLA74_06395"
     tRNA            complement(join(11179..11226,11248..11264,11284..11302))
                     /locus_tag="VLA74_06395"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11249..11251),aa:Ser,seq:tga)
     gene            11679..12812
                     /locus_tag="VLA74_06400"
     CDS             11679..12812
                     /locus_tag="VLA74_06400"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HSF50374.1"
                     /translation="MIPINRPWIDDEEKQEVMRVLDENILTSASRDGGKRVQEFESSL
                     KGFLNVKHVISVNSGTAALHASLLAIGVTSGDEVLLPSFTFVATANSVIAAGAKPVFV
                     DINKKDYTIDIPDLKKKITKKTKAMIPVHLYGHPADLDELAEISKQNSFDIIEDACQS
                     LGSTYKNKQTGTFGKLGCFSFYASKVLTAGEGGAIVTNDDKIADTLKMIRNHGMVEGY
                     DTRIPGFNYRLPELSAALAKIQMRKINQILKIRRRNSQLLSNFIERSISNFQVLNIPE
                     ENHIKKFNWYLYTLGFIGKKGSELRERIKKKMIEGGIGVSVYYDPPVHLTPYYKQFSF
                     EGSLTNTESASKTVLSFPVHPYVTETDVEKMVNILKEELPIFV"
     gene            12918..>13413
                     /locus_tag="VLA74_06405"
     CDS             12918..>13413
                     /locus_tag="VLA74_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HSF50375.1"
                     /translation="MALDTGDTAWMIVATGLVMLMTPGLGFFEAGLIRFKNGLSAIMH
                     TFSGLAIVSTLWFIVGFTLTFGPDQGGIIGGLDHVFYQGVGTHEAFAAAPTIPGVTFA
                     TYQMMFAVITPLLISGAYAERLRYSAFFIFTVAWSLFVYFPLAHWVWGGGWLFQLGVW
                     DFAGG"
BASE COUNT         4125 a         2381 c         1797 g         5110 t
ORIGIN      
        1 atgtggaccg atgatcattc ctgcaaggat ataaccaata actagcggtt gtttaaattt
       61 aaatgagatg aatgccatga cagacgcgat aatcataata actgaaaaat cttgaatgaa
      121 ctgtccgacc tcaataccaa caaccattat aaacaactac aaaataaaga gtataagaac
      181 taaaggaatt cgaaattaaa tatatttatg gataaatact acaagaatac tccaaaaacc
      241 aatatatgtt atcttgttta ctagaacaga tcttgataat actcttccca gtttatgttc
      301 ttttagcagt ctacaataaa atccaaaaat atctgtaatc cagagtacct ttatacagga
      361 aagcatcaaa taatagatgc tttcttgtca gttttgtacc aatcaacgta aataaatcta
      421 ctttgccata caataaagtg ttgtatcaat ttagttacag atttatatat attcattata
      481 aaactttgaa acattatatt tttatcaatt aagtcaagtc aacggagtca tttatgtttt
      541 tattctttgt ttatctatag cacttacaga ttatttttat atttcttcta tcggtataat
      601 ttcatagtaa attatccatt tttttcataa gaaatctctt gatattgtaa ataagaacct
      661 tataatatct tatttgaaca taattaaaaa gataaaaaat ataaaatcag aatttataga
      721 aagtcgattt gtaataaata ttacattaca tcttttttaa tacaattgca aaaaatatat
      781 gtatacatct catgtattat tataattgaa cagtcacgta taaacgatat ccttcaagaa
      841 aattttaatt tggtgtgact aatatttttg tatattactg cgctttctca gctgccaata
      901 catttttaaa ttactctata tctaaattaa ttaaggaatg aatcagattt aggtaaaaga
      961 aaagttttga atgaggctga gcttaaggag cttgtgatgc cgcatgaagg agaaatgttt
     1021 ggaagagtta tcaaactagt aggaggagat aacgttattg taaaatgtac tgatggaaaa
     1081 attcgtacat gtcgtattcg tggaaaaatt aaaagacgaa tgtggatcag agaaaatgat
     1141 ctagttcttc ttgctccatg ggattttcaa tcagaaaaag ctgatattat ctggaggtat
     1201 attgccgctc acgccgacaa attagaacaa gatggtcatc tacaaggatt aaataaatag
     1261 atattaatat aactatttta tccattactt caaatttatt gcaatttgag ctttaaccaa
     1321 taatgctttg tcttttatat tctcacatga atattatttc tttttaagaa tctttttacc
     1381 ttatttattg ttgatttttc ataatggaat atcgaggcag ctagtgctgc atctacattc
     1441 gtttttttaa agacttctaa catatgcata gctttaccac agccaccaga agctatgacc
     1501 ggaatactta ctgtcttaca aataacatca ttcaatttca aatcataccc ttcttctgtt
     1561 ccatctgcat caatgcttgt caaaagaatt tcaccagcac ctaatttttc tacttcttgt
     1621 gcccattcta tagcatctat accagtgccc tcttttccac cgtaaattct tacctcaaac
     1681 cagtattttt taattagatt attattcttg tcatattcat ttattatatt cttttttttg
     1741 gtatctaaat cattatattt ttttttaacg tcgatcgcaa caactataca ttgtcttcca
     1801 aaaatagaca tcagctctgt gattaattca ggattcttca ctgcacccgt attgatagag
     1861 actttatctg ctccgcttaa tagtatatct ctcgcatcct caagtctctt gattccgcca
     1921 cctactgtaa atggaatatc tattaccctt gctacatttc gtactacttt ctttattatc
     1981 tcgcgtctct gttgtgaggc tgtaatatcc aagaagacaa gttcatctgc tccttgttgt
     2041 gtatatctat tagcaaattc taccgggtcg ccagcatcct ttacttcttt aaactttatt
     2101 cccttaacta ctcttccatt atctacatct aaacaaggta tgattctctt tgctaatgtc
     2161 ataattcaga caaccgttct tgcttttttt acatctattt ttccatcata aatggacttt
     2221 ccaagtataa ctgcagaaca accaatattt tttactctta taatatcttc aacacttgaa
     2281 attcccccac tagcaattat ttttgaaccg aaaatatttg atgcgtaaga taacatgttt
     2341 atatcaggtc catttaaagt accatccctt tctactgttg ttaacaaaaa ttctttgatt
     2401 ccttttgcca taaagagctt tactgcttca cttactttaa atccagaggg ccgtctccat
     2461 ccatcaatca ttactattcc cttattttga tctattgaaa caattatctt ctccaatttt
     2521 tcttttggaa cttgttgaaa gacatttggc tgtttatatg ccaatgttcc gatcacaatt
     2581 ttttctgcat ttccatacaa catctcgtta atagcttcaa atgatcttat tccgcctgcc
     2641 acttgaacag gaatttttac tgattctata attttcaata ctatatcttt gttgtttttg
     2701 ttgtcattcc atcctgttct taatgtagca tctagatcta cgacatgtat tctgtcaact
     2761 tcataacttt caaaattttt tgcaatttca ataggattat cgctataaac aattttgttt
     2821 tgcggatctc ccttaatcaa tcttacaact tttccctcaa gaatatcaat agcaggtatt
     2881 attttcattt tttattatca cacacattta aaaaattttt gattattttt tctccattat
     2941 taccagattt ttcaggatga aattgtgttc cgaatatatt gtctttttcg ataacaactg
     3001 ggatatcttt tccataaata gatttggcaa ctattatatc tttattcaca ggaacgatgt
     3061 aatatgaatg aacaaaatat gcccatgcct cattttctat tccagataaa attttactat
     3121 ctttattagt tatatcaaga ttgttccaac ccatatgcgg aattttaact ttctttttag
     3181 gtagcataat tacgttacca tcaaaaattc tcaatccttc taattctcct tcttcacttt
     3241 ttttaaataa catttccatt cctaagcaaa ttccaagtac gggaatcttc ctatctatga
     3301 gatcacaaaa attttctcta tatggttcaa ttgatcttat tgcaggatca aaatttccaa
     3361 ctcctggaag aatcaatcca ttatatctat taacattttt taaggtttta ataattgaaa
     3421 catgtttagc tccatttctt tctaacgcac atttcagact atataaattg ccagcaccat
     3481 aatcaaaaat tgctatatta ctcactatct acattacacc ttttgtactt gggatgtcgg
     3541 tttgtttggg atctatctta gcagccattc gaaatgctac tgcaaaagct ttcatcgccg
     3601 cttcaatctt gtgatgatcg ttgtctccat attcaacata aacgtgaata catccattta
     3661 tattttgtaa caaactgtca acgaaatgtt ctaaatcttc cttgggtatt ccttcaactt
     3721 cttttcttgc aagtcctaaa ctcaatttag aatattgtct tttaacaaga tcaatcgatg
     3781 aaacagccac tgattcgtcc ataggaatag ttgcatatcc aaatctacta atttttgtcc
     3841 tatctgatag ggcattattt attgcttgac caatagttat tgctacatct tctattaagt
     3901 gatgagatat tttgtcgttt gattttgctt ccaggttgat atctgtcata ctgtgtttac
     3961 caaatgttga tacgaggtga tcaataaacg gatatcctgt ttttatgtta actaatcctg
     4021 ttccatcgat attaacttct actttaatgc tcgtctcttt ggtattcctt tctttcttca
     4081 tatgcctcat gtaagataca ttggtatcag gagaatcaga attcaactaa gtatattttt
     4141 atcatacttt atttaataca tttggtaaat tgttaatgct tttaataata aaatctgcat
     4201 ttttatcttt aaatttgtta attaattctt gttgattagt gctacagcca tacactccac
     4261 aaaaaaatac ttttcttctt tcaccttttt tcctctttgt tagatttacc tctctttcgg
     4321 ctcttttagc cattattgaa tcctcaatcg aatctccaca atatattatg tcatcactaa
     4381 aatccataca tttcattact cttatcaaac catgtggatt tggtttggca tatcttcttt
     4441 tttcatcttc aagaaatatg ctcttattgc catttaacaa tatgaatttt ctttgtagcg
     4501 aaaacttagc agcgatttta ctccttccag aaaccattgc aatcttgcca tcgaatttat
     4561 tcgacaaagc tctaatagtt ttgttagtaa ttattatctt gtcattttct attaatggtt
     4621 taccaaaata atagattgtg tcaaatccat atttcattct aaataatttt tgtccataaa
     4681 aaaattcatc aaataccgta gaaactatac tttttccaac tggtccggga taattcaaat
     4741 attttctaat tttatcaaaa tctaaatcat ttttctctga caatttttta ctagagtaat
     4801 ttaatgattt tttcaaaaat ttttcgacag atattattcc acaatcatcc gaattctctg
     4861 ctgttctcaa aagaaatctt ttcaaatcat cattttgcaa attagaattt aataacaaag
     4921 taagagtaat agcatagctt gtatctgtat cgttgttaaa tcctcctgat tgtctaaacc
     4981 tcgaaattat attgtctgaa ataatatttt tggaacaata ttttttcaaa tgatttgtta
     5041 taaatcgtgt tgtttttttt atcgcttcgt tataagatct tctgacatct atcaatactc
     5101 catcaatatc aacaataata gaagttactc taatgttgtt atattttgta ttcgaggaaa
     5161 tgaaatctgt ctctgttatt ttgttataca ttatatacct tgtgtaatac tttcagaaac
     5221 ctatcattca tttctttcgt tccaattgtt actctaatat atcttccttc tctaccttca
     5281 atttttccta atgcttttac cctgattttt tccttttcta atgtttctag aattgtaata
     5341 tatttatcaa tatctatgat ttggatgaag ataaaattag catcgctttt aaaaactcgt
     5401 attcgatttt ttgtagattt taaatggtta tatatacatt ttctttcctt tttaattact
     5461 tttacaacat ctttaatgta gtcagaattt ttcaaaattt cagtgcctat acatagtgat
     5521 aaggtattga taggataggg agattgtata agcgatttga aaatatttgt gaatttctca
     5581 ttggaaatac aataacccaa tcttgcccct gccaaaccaa ctgctttcga taatgttctc
     5641 aaaactataa cattgtcttt ttttattata ttcgcagcaa tcgaataatt agcaaattct
     5701 acatatgcct catctattat tatcagttta tcatctaact gattaataat ttctaataat
     5761 tgtccttttt ctatctgatt tcctgtagga ttatttggtg aacaaatata tattatttga
     5821 gatttttttg cactcttgat gaattctggt ttatccagag agttatcttc cttttgaagg
     5881 ggtactttat ctactgtaac agaataaagc ttacacctat ctacaaagta tgtaaatgta
     5941 ggagtaaaag tagttactcg attctttttt ccaaaaattg ataataccag atctattatc
     6001 tgatcagaac cattgcctat cgataaatac tttttactta tttttgtata ttgtgatagt
     6061 gccatgtaga agtcttcaac ctgttgtaat gggtattctc ttagatcaac ttcttttgat
     6121 acttttaatg caatatctct aatgaagtca ctttttaaaa caagattttc attagagtct
     6181 aattttattc catcattttt tttaggtttg atatatgctt caattttgac taattcatta
     6241 aatctttttt caagccaatt ttgcataact aattttcatc tcattttttc tttcttgttt
     6301 gtgaaatatc tatgagtctt tccttgactg cttcataatg attgacaagt ccttcttctt
     6361 gtgttattgt tttgataaaa ggttctattt tttttaggtc atttttgtta gattttataa
     6421 tagttgaaaa cctaataaag tccaatacag aaagcgatgc acgtgatttc ccaaaaccca
     6481 tggtaggaag aacgtgattg gaacctaaac aataatcact tgcagaagaa ggtgtatttt
     6541 cgcctattag tattagacct gcagagttaa tttttcttga tatatttaac tcttttatag
     6601 acataatttg taaatgttct ggagctatct cattaacaaa atctattgct aaatcatcat
     6661 tttcagctat tgcaataaat ccatttttat ttaaactttc tgaaacaaat tctttacgtg
     6721 atatattttt tttcagaatt ttattgactt cattttgtac tttatcagca aattccaatg
     6781 aatttgtaac tactccacat agggtgtctt tgctgtgttc tgcctgagaa actaaatcta
     6841 acgcaacata cctaggattc gtttctgaac tcgcataaat aaccaattct gttggaccag
     6901 ccatcatatc tatcgatact ttgtttgaaa ccaataactt tgccattgta acgaaaattc
     6961 ctcctggtcc aactattttg tcaacactct taatactatg tgtaccaaaa gctaatgccg
     7021 ctataccttg tgctcctcct accttgtaaa attcatttat gccacaaata tctgctgcaa
     7081 ctaatgttaa aggatctaca tttccattct tttgtggagg agaaatagcc acaagtcttt
     7141 ttacaccagc cagttttgct ggtgttgcac acataaccaa tgtactggga tatcttgcaa
     7201 gacctcctgg aatataacaa ccaacacttg aaattggttg aacaaatcgt ttaatccttc
     7261 tattatttga atataaagag gatatttttt taatatgttc taaaaaaata atatcgtttt
     7321 caattaatgt ctctcttatt ttgtatatgg ttttaacttg tttatctgtg acttgtttgt
     7381 aagcgtcttt tatttcatct ttatttactc ttattgaatc aaccataact ctgtcatatt
     7441 catatgtgta ttttttaaga gcatgatctc catccttcct tacattacat attatttctc
     7501 ctaccttttt gataatgtct tcagaaaaat tatcgattgt attatatctt atattctcta
     7561 catcatcttt aggattcttg ataactattt ttttaatcaa ctaaccatct tctttatcta
     7621 tctttatttc ttcaaaaggc aatatctgcg ttggttgcag tactaccaat ccttgagcaa
     7681 tctttctcat aactggaaca atttttatga attcattctt atcgattatt gtattaactc
     7741 cataccaccc ttcctcactc aaagcgctga ttgttggacg tttcaatgcg ggcagtctac
     7801 caagtagctc atctaaattc tccttcttta catttacaaa aatatgaagt tttttccttg
     7861 cttcgacaac tcctctcaac aaagcgatca tatctataat tttttctctt tttttatcgt
     7921 cttgtataga ctgtttgttt gctataacaa cagaacttga ttccattata gtatctatta
     7981 tttttagatt attttggacc aaagttgttc cagtttctgt aatatcgcat attgcatcaa
     8041 catcctcggg cggtttagcc tccgttgcgc caaaagaaag gaaaatttct acattcttat
     8101 tttctccaat tcttatccaa ggtgtaatta tcattggatc attatctcca aaatattttt
     8161 tataggctga attggatttt atatgatctg ctatcgttgt aaggtattca gaagatattc
     8221 ttaacggttt tttgtttttt gcatattcag cgatcatatc atccaaattg ttaaactgaa
     8281 aattttcagg aattgcaatt acctgtttaa ctttaccata ctctaaatct agcaatattt
     8341 ttacatcggc tcttgcttcc tttatccagt cctttccagt gatacctata tcatatagtc
     8401 cttcttgtac ataagtggga atttcctgtg gtcttaaaag tttaacctct atttcaggat
     8461 cactcagttt tattctatat gttcttgatt ttccactgac tttttgccaa gcctcttcta
     8521 atatcttaaa agttgcctct tcgatagttc cctttggtac agcgaattta actacagcag
     8581 gcataaatgt acaagaaaaa attgttcatc cgatatatat ctaattgtta agagaactaa
     8641 attctatttg aattcaataa ttcaattatc tctttagcct tgcttacact aacatttttt
     8701 tcttttatta gtctttcagc tataatattc acttgatttt cttctgctcc agctgtaaga
     8761 gctatatttc tcgcatgtaa tttcatatga cccttctgaa ttccttcatt agccaatgcc
     8821 ctgatagcgg caaaattttg agccaaacct attgcagcaa aaatcgatgc aagttccttg
     8881 acatttttta tatctagaat ctttaataca acttttacta tgggatgtac cgatattatt
     8941 cctccaataa ttccaatagc cataggtatc tctatttctc caatcaagtc tccatcttta
     9001 gatttatacc attttgttaa tgatctatac tttccatctc ttgcagcata tgcatgtata
     9061 gatgcctcaa gagctcgaaa atcttgtcca gttgctattg ctaaagcatc aataccattc
     9121 attatcccct tattatgagt aactgctcga aacgtatcag aatatgcgaa agcataagct
     9181 aagagaattc tatttactcc ttcagatcca cctatcatct ctttgggaaa agttgcttta
     9241 catcttgcca atcgatttac agaataattt gataatatct tgagaactac ttctccattg
     9301 gataattttt caatcttcgg agcaatcgat tcacacatag tattgataac attagccccc
     9361 atcgcatctt ttgtatcaac tattaattct attattatca tataacccat attgttaata
     9421 ctctcatcta atatctctcg aacctgaata tctttagcta ctacagttct actcttcaaa
     9481 tttgcgatct ttaaaagttc ctctttatta tctgtaatta ttttccttac ccgttctctc
     9541 tccttcttac ttacaaatag atctttgtga ttcctctttc ttgctactag cagaatttgt
     9601 cctatcatta ttgattcatc agcttcagct atgaaacctc ctgccatctt ggcgatctta
     9661 gccgccttac ttgcagctgc aataactgaa ggttcctctg tagaaactgg tatcaaatat
     9721 ttttttccat taattacaaa attcgtagca attcctaatg gaatcggaat tattcctatt
     9781 gcattctcta ccatgttgtt aattttgtta aaggaaaaat ttttgggcat atcttttaat
     9841 aattgtaaat cctttttttt tattttagtt tcattttgaa taaaatctag tctctcatcc
     9901 aaatctaatt cataaaattt tttaaatgaa ttgtcatttc gctgcatttt accatttttc
     9961 acaaattaat taaggtttga gtatttttaa aatcttatcg tcgttgtctt gagggatacc
    10021 tcttccatct gtgttacttg tcaaaatgta taaagaacca tcatttccct caactacgtc
    10081 tcttagcctt ccataaccta ccaatacgtt attctgttca tgtgaatcga tgtctatttg
    10141 tcttaaatga gatcccttta agctagtgac gataagatca tttttatatc ctaatttatt
    10201 ggatgatgca aaagttattc cactaggtgc tatggccgga ttaaagcaga aaatagcctt
    10261 ttcaaaatcc tttgttcctt cacatttcac gttaggccat ccgtaatttt ttcctgctat
    10321 tattaaattt atttcatcaa aaccagatgg accatgttcg gatacataca tacttttgtt
    10381 ttctggatgc catgaaattc cttgaatgtt tctatgtccc attgaatata cagatgaatt
    10441 cttgaatgga ttgtcttctg gaattgttcc atctaaatta acacgtaata tcttgcctgc
    10501 aagtgaagaa agattttgtg caaggtgtgg cttcgaagca tctcctgttg ggatatataa
    10561 tttgttatct ggtccaatct ttatcctccc tccgttattg tataaagatc ctggtataga
    10621 atcaattatt atttttgaat ctataatttt attatctttt tcttttaaaa gaagtacttt
    10681 gttaaagagc tcgtttccat tggtataagt atgataaata tacattagat gattctcagt
    10741 aaaattagga tgtaacacaa ttcctaatag ccccgaaccc cccttttgtt ctactcttat
    10801 gaatgcaact ggttcgtcaa gaatatttcc attagtacct atcgttctta tttttccatc
    10861 tctttcggta aaaaaaatcc tattatcttt agatgtttca atggcccaag gagagtctag
    10921 attctctgca atgatctcta tccccttatt ggagccagtt ttatttagta atgattctgg
    10981 ttctggcaga ggaatattgg tgtcagatgg agtcataaga attgttacaa taccaaccat
    11041 tgccacaaat atcgctataa taaataatct cttatccatt ttttaaactg attaatatgc
    11101 aagttatctg aagcataata aatttcattt tcaaaaatca taattcgtct atccacaaaa
    11161 tcatttttta aaaaaaagcg cagatgagga gatttgaact cctgctcgcc cgaaggcgaa
    11221 tcggctggct cttaaccttg aagattactc aaggccgacg cattattgtg ttcctaatgg
    11281 aagaccactc tgccacatct gcacaacaaa taagctaaat tacttattat tatattttaa
    11341 taatatactt tatcaaagcc tattgatatt tatctttttt caaatatatt gaaaaactgt
    11401 gaatattaaa aaagtagaat aatactattg ataactactg ttccattttc acttaaaatg
    11461 ttgaaaatca aaataaatgt atattgttgt ctctgaatta aaaaatataa gatagtaatt
    11521 cacaggatta tcaaattttg gtctatcatt gataatttta atttataatc atgaactaat
    11581 atctactaat gtgtatatca actcgaaaca aagtaaataa acatatgttg atgtttatta
    11641 caaaaactta attactttaa ataatcagct actataaaat gattccaatt aatagaccat
    11701 ggattgatga tgaagagaaa caagaagtta tgcgagttct tgatgaaaat attcttacaa
    11761 gtgcatctag agatggtggc aagagagtac aagaatttga atcatctttg aaaggttttt
    11821 tgaacgtaaa gcatgtgatt tcggtaaatt ctggtacagc tgctttgcat gcctctttac
    11881 ttgctatagg tgttacctct ggagatgaag tgttacttcc atcatttaca tttgtagcta
    11941 ccgcaaattc tgttatcgcg gcaggtgcaa aaccagtttt tgtggatatt aataaaaaag
    12001 attatacaat tgatattcca gacttaaaga aaaaaattac aaagaagaca aaggccatga
    12061 ttcctgttca tttatatggt catccagctg atttagatga actggcagaa atttcaaaac
    12121 aaaattcttt cgatattata gaagatgctt gtcaatcttt aggttctact tataaaaata
    12181 aacaaactgg aacctttggt aaattaggat gtttcagttt ttatgctagt aaggttttaa
    12241 cagccggaga aggaggagca attgtaacaa acgatgataa aattgcagac acattaaaaa
    12301 tgataagaaa tcatggaatg gtcgaagggt atgatacacg tattcctgga tttaattatc
    12361 gacttccaga actaagtgct gctctcgcaa agatacaaat gaggaaaata aaccaaatat
    12421 taaaaattcg aagaagaaat tctcaattat tgtccaattt tattgaaaga tcaatttcaa
    12481 attttcaagt attaaatatt cctgaagaaa atcatatcaa aaaatttaac tggtatctct
    12541 atacgttggg tttcattgga aaaaaaggtt ctgaattaag ggaacgtatc aagaaaaaga
    12601 tgattgaggg tggaataggc gtttcagtat actacgaccc tccagttcat cttactccat
    12661 attataaaca atttagtttt gaaggaagtc tcaccaatac tgaatcagcc agtaaaacag
    12721 tattatcatt ccctgtacat ccatatgtca cagaaactga tgttgaaaag atggtaaata
    12781 tattaaagga agaattacca atttttgttt gatttttttt tataatttat aattattatt
    12841 tgatatagaa ccaaaaatta ttttttattt tgaaagaaca aactttttta taatactatg
    12901 tggattatgc aacaggaatg gcattagata ctggtgatac tgcatggatg attgttgcaa
    12961 caggtcttgt aatgttgatg acacccgggc tcggattctt tgaagctggt ttaataagat
    13021 tcaaaaacgg tctatcggca attatgcaca cattttctgg attagcaatc gtttcaactc
    13081 tctggtttat cgttggattc acgctaacct ttggacccga tcaaggaggc ataataggag
    13141 gtctagatca tgttttctat caaggggtcg ggactcatga agcatttgca gctgctccaa
    13201 caattccagg ggtaaccttc gctacctatc agatgatgtt cgcggtaatt actccgcttt
    13261 taatatcagg tgcatatgca gagagactga gatatagcgc atttttcatc tttacagtgg
    13321 cttggagttt gtttgtctac ttcccactgg cgcactgggt ctggggagga ggatggcttt
    13381 tccaactagg agtatgggac tttgctgggg gta
//
LOCUS       DATIAS010000317         5706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1148099, whole genome shotgun sequence.
ACCESSION   DATIAS010000317 DATIAS010000000
VERSION     DATIAS010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5706
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1148099"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VLA74_06410"
     CDS             <1..188
                     /locus_tag="VLA74_06410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50376.1"
                     /translation="MLMALGIAREIMIIIAVTRIWKSLKECKKMKQSDNNSYEKMIIV
                     KTGDYKSGRKFDRSERK"
     gene            190..489
                     /locus_tag="VLA74_06415"
     CDS             190..489
                     /locus_tag="VLA74_06415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50377.1"
                     /translation="MNGGRNRKVTTSISSLAGTGGKLSIPYQLYSSLGVINPWTVKTQ
                     EDEDNYYKSLLYGCRECDRIEPSLKFMLCHRCSQNGKSKYEQDQREARKKEEVRI"
     gene            624..1568
                     /gene="trxB"
                     /locus_tag="VLA74_06420"
     CDS             624..1568
                     /gene="trxB"
                     /locus_tag="VLA74_06420"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HSF50378.1"
                     /translation="MSVHNKLIIIGSGPAGLTASIYAARGGVEPLVISGNEPGGQLMY
                     TAEVENFPGFDEPKLGPTLMEKMRKQAERFVTRFVDNAISSVNFSSKPFLIKCPSMNN
                     GDNDEEYFADSVIIATGASASWLGLESEQRLRGRGVSSCATCDGFFFKGKDVVVVGGG
                     DTAIEEALFLVKFTKSVMVIHRRNRLNASAIMQQKAFRNEKISFLWNTIIEDIIGDNK
                     VESVRVKNVITEQTSDIKIDGVFVAIGHKPNTDLFKGQIELDERGYVKKYEESKTNID
                     GVFVAGDAYDYRYRQAVTAAGSGCKAALDVINYLESKN"
     gene            complement(1758..1961)
                     /locus_tag="VLA74_06425"
     CDS             complement(1758..1961)
                     /locus_tag="VLA74_06425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50379.1"
                     /translation="MLNKCWLPKFRVFLNHGKYRITEKKYHLMIICKFNLANMNDRKS
                     VRHTQHIAIYCNDIRRRLQKLGQ"
     gene            complement(1951..2646)
                     /locus_tag="VLA74_06430"
     CDS             complement(1951..2646)
                     /locus_tag="VLA74_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HSF50380.1"
                     /translation="MSQLWKLSDRLSSDQKIFFAEIIGTFIVVVLATGSVVIDAKTGG
                     VLGLPFIAIFPLIGVTIGVYVFGKISMAHFNPAVTLAFLITGHIKKYQLAYYFVAEII
                     GAFLASLFVKYFIGYEANLGVNVPNYSYPLPFIFGIEVLASSLLMVVICFVVYTKGLR
                     GFGGIVIGSIVGLDIFFLAFISGASMNPARSLAPAVLSGMTNDLWLYLSATFIGTSFI
                     ALLFRGKFTKNVK"
     gene            complement(2618..3067)
                     /locus_tag="VLA74_06435"
     CDS             complement(2618..3067)
                     /locus_tag="VLA74_06435"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HSF50381.1"
                     /translation="MKFFGRSKTNSSNKDAKTILFVCIENAGRSQMAEGFFKKYAPSR
                     FKTVSAGTKPAYQLNPIVVEAMKEVGIDISKQKSKELTDEMIRDSYKVVNMGCMDKNF
                     CPTIFVPKVIEWNLEDPKWKSIAEVREIRDEIEKRIKEFVSTLEIKR"
     gene            complement(3084..3866)
                     /gene="arsM"
                     /locus_tag="VLA74_06440"
                     /pseudo
     CDS             complement(3084..3866)
                     /gene="arsM"
                     /locus_tag="VLA74_06440"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
     gene            3927..4307
                     /locus_tag="VLA74_06445"
     CDS             3927..4307
                     /locus_tag="VLA74_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50382.1"
                     /translation="MRETKGQKVKKLPLYDHCNFDRYDSQKLMLQTEKLRNLITKRGT
                     FEMLIPLCCTTNPVRYKQFKEVMKGISSKTLARRLKELQKDGILERKAYNEIPPRVEY
                     KMTKKGQELVESIITLIQWMIKWS"
     gene            complement(4563..5111)
                     /locus_tag="VLA74_06450"
     CDS             complement(4563..5111)
                     /locus_tag="VLA74_06450"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF50383.1"
                     /translation="MKSFVKENNTRVEDIMSTNVVSLDISKIASHAADLMTEKKIGSI
                     VITKNNKPFGIITERDLVRRYARDTPVGDLASHPLITADRSTTVEKVAKIMLKNGIRK
                     IPIVDQNNDLVGIITTTDLVMFLLPKIKSDLASSILRTATRGKGPRCDSCGSSIEIQW
                     CDSCGRFMCLSCEDAVHTIDLP"
BASE COUNT         1982 a          918 c          902 g         1904 t
ORIGIN      
        1 acatgttaat ggctttaggc attgcaagag agataatgat aataatagca gttaccagga
       61 tatggaaatc attgaaggaa tgtaagaaaa tgaagcaaag tgataataat agttatgaaa
      121 aaatgataat agttaaaact ggagattata aaagtgggag aaagtttgac agaagtgaga
      181 gaaaataaaa tgaatggagg tagaaacaga aaggtaacca cctcaattag ttcccttgcg
      241 ggaactggag gaaaattatc aataccttat cagctatatt catccttggg cgtgattaac
      301 ccttggacag taaaaacaca agaagatgaa gataattatt ataaatcgtt attatatggt
      361 tgcagagaat gcgacaggat agaaccgtct ttaaagttta tgctatgtca taggtgttct
      421 cagaatggta aatcaaagta tgagcaagat cagagggaag cacgaaagaa agaggaagtt
      481 agaatataaa attaataatt gattatctag ttaaaaaata aaatttactt taattcaaat
      541 tatcatattc aaagttcctc ttattcagat tttgaaatta taaatgatgt ataaacctat
      601 aatattctgg atggttagta ataatgagtg tccataataa actcataata attggttctg
      661 gacctgcagg tttaaccgct tctatatatg ctgcaagagg aggagtagaa cctttagtta
      721 tatctggcaa tgaaccaggt ggtcagctaa tgtacactgc agaagttgag aattttccag
      781 gttttgatga acctaaattg ggtcctactt taatggaaaa aatgagaaaa caagctgagc
      841 ggtttgtgac tcggtttgta gataatgcaa tttcatctgt taatttttca tcaaaaccat
      901 ttctcataaa atgtcccagt atgaataacg gtgataatga tgaagaatat ttcgcagatt
      961 ctgtcattat tgctacagga gcttcggctt catggctggg attagaatcc gaacaaagat
     1021 taagaggaag gggagtttcg tcgtgtgcta catgtgatgg cttcttcttc aaaggaaaag
     1081 atgttgtagt agttggtggt ggagatactg ctattgaaga agcattgttc ttggtaaaat
     1141 ttacaaagag tgttatggtt atacatagac gaaatagatt aaatgcatca gcgataatgc
     1201 aacagaaagc atttagaaat gagaaaatat cttttctttg gaataccata attgaggata
     1261 taattggtga taataaggta gaaagtgtac gagttaaaaa tgtaattaca gaacaaacat
     1321 cggatatcaa aattgatgga gtatttgttg caattggaca taaacccaat acagatttgt
     1381 tcaaaggaca aatagaactt gatgaaagag gttatgtaaa aaagtatgaa gaaagtaaaa
     1441 ctaacatcga tggagttttt gttgcaggag atgcatatga ttacagatat agacaagctg
     1501 ttacagctgc aggctctggc tgcaaagctg ctttggatgt cataaactat cttgaatcaa
     1561 aaaattaaat acaattacat tattagactc ttaaattaag atatatcgcc tccattaata
     1621 aaatttcaaa ctcattattt cttgttgtga tagtattata catataaaca aaatattgta
     1681 tccaattata tacatgcaat aagtttcatt cattttctta cttttttatc cttcgaccta
     1741 ccttgagatt ttataaatta ttgacctaac ttttgcagac gtcgccttat atcattacaa
     1801 taaattgcaa tatgttgtgt atgtcttaca ctttttctat cgttcatatt tgctaaattg
     1861 aatttacata ttatcattag atgatatttc ttctctgtga ttcgatattt tccgtgattt
     1921 aagaatacac gaaatttagg tagccagcat ttatttaaca ttcttagtaa atttacccct
     1981 aaataataac gctataaatg aagttcctat gaaagtagca gacaaataaa gccacaaatc
     2041 atttgtcatt ccagataata cagcaggtgc tagcgacctg gcaggattca tggaagcacc
     2101 agaaataaat gccaagaaaa agatatctaa accaacaata ctaccaatta ctattccacc
     2161 aaaacctctc aaaccttttg tgtagactac aaagcaaata acaaccatta acaatgaaga
     2221 agccaaaact tctattccaa atatgaaagg aagtgggtaa ctgtaatttg gcacattaac
     2281 acctaaattg gcttcatatc caataaaata ctttacaaat agacttgcta aaaatgctcc
     2341 aataatttcc gcaacaaaat aatatgctaa ttgatatttt tttatatgtc cagttattag
     2401 aaatgctaac gtcactgcag gattaaagtg tgccatagat attttaccaa aaacatatac
     2461 tcctattgta actcctatca atggaaaaat agcaataaat ggaagtccta atacccctcc
     2521 agtttttgca tcaataacta ctgaaccggt agctaataca actacgataa atgttccaat
     2581 aatttctgca aaaaatattt tttgatctga tgagagtcta tcgcttaatt tccaaagttg
     2641 agacaaattc tttaatcctc ttctctattt catctcttat ctccctaact tccgctatag
     2701 atttccattt tgggtcttct aaattccatt ctataacctt tggtacgaat attgtaggac
     2761 agaaattttt gtccatacat cccatattca ctactttata agagtctcga atcatttcat
     2821 cggttaactc tttagatttt tgtttactga tgtctattcc aacttctttc attgcttcaa
     2881 ctactattgg attgagttgg taggcaggtt ttgttcctgc actcacggtt ttaaatctac
     2941 taggagcata ttttttaaaa aatccttcgg ccatttggct tcttcctgca ttttcaatgc
     3001 atacaaagag aattgtttta gcatctttgt tgctactatt tgttttagat cttccaaaaa
     3061 atttcatgat tatatcactc ctactaattt gttattgttt taactattat actaacgatt
     3121 ttccttccgt cattaaaatt ggtttcatcc atgtatgttt tttcatttaa tatctggatg
     3181 ttttggaatc ctgcgtcttt aatgctttgt aaataatttt cttttgttaa tgcaccatca
     3241 atacaactac accaattatc agaattgata tcatctttac taatttcttt agttgttatc
     3301 aaatcagaaa taatcattct cgcgtttttg tcttttttca aaatccgata aatttcttta
     3361 aaagtatttg tcttgttgga tgttaaatta ataacacagt tacttattac aacatctact
     3421 gaattatcct caattggaat tctttcttct atgtctccct ttctaaattc tatatttcta
     3481 tagttattag caatttatgc ttttcttgct ttttcaagca tttcatcagt catatcaatt
     3541 ccaataactt ttccttcttt acctaccagt ttagacgcta agaatgcatc aattccagca
     3601 ccagaaccca aatcaactac agtttcacct ctttttatat ctgcaaaatt tagcggtgca
     3661 ccacatccta atccaagaat tgattcttct ggaatagatt tcaattctat ttcattatat
     3721 ccaataacag atgatacttg ttctttagaa atgttacctg tatcgcaaca aacctcttgt
     3781 ggaccacaac aagaactgac attacctttt aaagcaattt ttccataatt ctctttgatt
     3841 ttttctttta ttagttcctt ttgcatattt atctttacaa aggaaactat ttaaattgtc
     3901 gagatgacca tattacataa agtatcatga gagaaacaaa gggacaaaaa gtaaagaaat
     3961 taccattata tgaccattgt aattttgata gatatgactc tcaaaaactc atgttacaga
     4021 cagagaaact tcgaaatctc ataacaaaaa gagggacatt tgaaatgttg attcctttat
     4081 gttgtacaac caatcctgta agatataaac aattcaaaga ggtaatgaaa ggtattagta
     4141 gtaaaactct tgctcgcaga ttaaaggaac ttcaaaaaga tggtatacta gaaagaaagg
     4201 cgtataatga aattccacca agagtagaat ataaaatgac taagaaaggt caagaattag
     4261 tagaatcaat aatcacttta attcaatgga tgataaaatg gtcatgatta aggaaaatta
     4321 tttcattttt ctggttcgaa aagttcaatc tctatatgtt tctttactat gacattagac
     4381 tcttattttc atggctgtag gtataaatcc aaataaaaag gcagaatact catgaattct
     4441 ggtcagacga tatctcttta gtctgaaaaa tttttttata cccctctttg atcttatcag
     4501 gtaaatgatt ttacttctag aacatgaaat agtcactaca tgtgttttaa aatataatta
     4561 cattagggta aatctatagt atgcaccgcg tcttcacaac ttaaacacat aaacctacca
     4621 caactatcac accactgtat ttcaatagag ctgccacatg aatcacatct aggtcccttt
     4681 cctctagtgg ccgttcgcaa tatggaagaa gctaaatctg attttatttt aggcaagaga
     4741 aacattacta agtcagttgt tgttattatg ccaactaaat cattattttg gtcgacaatt
     4801 ggaatctttc tgattccatt ttttaacatt atttttgcta ctttttcaac tgttgtactg
     4861 cggtctgctg taataagtgg atgggaagcc aaatcaccaa caggtgtatc acgagcatat
     4921 cttcttacaa gatctcgttc ggtaattatt ccaaatggtt tattattttt agttataaca
     4981 atactcccta tctttttctc ggtcatcaaa tccgctgcat gagacgctat ttttgagata
     5041 tctaaagaga cgacattcgt agacattata tcctctaccc tggtattgtt ttctttcaca
     5101 aatgatttca tgatatgata tactgataat ttgtgaatac tatattatat tcattaacct
     5161 agcatttcat ctaatagtca gtttttagtt ttaacaaacc atgaaatcta aattctaaaa
     5221 ccaatgcgtc tttccgaatg atttgaactg gaccatatta taatgtgatc tcaatgatgg
     5281 cacaaaaagt atgctaaatt tgataaaaaa caagataaaa aaatagctcg tgattcctgc
     5341 cattttttgt gatctgtaaa aagattaaag gaaattaagg ggacgtgaaa gtactactaa
     5401 aaaggaatag atattgcgga gataccttac ggacctagtg atatggtggc atcagcagaa
     5461 gcagaaaatg agcagacagc accaaataca caaaatggct acggtcttgg caaaggatta
     5521 aaattcaaaa agaacttggt aaacacatgt atcaattagg atagaacgat tagaatagaa
     5581 cgattagaat agaacggtca gataaaagtt ggtcctcccc gaccaagatg taaagtaaca
     5641 gatattataa ctggattggg aggtaatcca gttggtgtag cttatgaccc agtaaatgaa
     5701 agaatg
//
LOCUS       DATIAS010000318         2039 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1421168, whole genome shotgun sequence.
ACCESSION   DATIAS010000318 DATIAS010000000
VERSION     DATIAS010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1421168"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1351)
                     /locus_tag="VLA74_06455"
     CDS             complement(<1..1351)
                     /locus_tag="VLA74_06455"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSF50384.1"
                     /translation="MSFKFLSLSFMIFFSSLIILLLSFSFIFAQTDEELTGSNGKSML
                     VVGSYPVGVDINPLTGMIYVANQFSNTISVIDSKTDETVNTIRVDNFPYDLDINPFNN
                     RIYVTNRGSATVSVIDGSTNQKLSDVRVGSSPVGISVNPSKNLIYVTNLDSKSLSIID
                     GINNNVIKTIKLNYIPYGITVNPITNKIYISNIDNSTVSIIDGKTNQVLNNITVGIVP
                     TGLYIDLKTNILYAANYVSNTVSIIDAKTNKIKSTVKVGKSPVDIAANPITNKIYVSN
                     LGDNTVSVINATTSEKIKDISMGTKIAENYESNDPSLDLPIEVAFPLVASRLAVSPDT
                     NVIYVSNTALNGISIIDSKLDQIVVRLSVNVNPENSGTVECNNYKFPSIHSILYPHNN
                     EITCVAHASREKSFDFWSDMVSTNKNPIKINVTQNNKLTANFKDSISTETYIGTVAAI
                     "
     gene            1533..1826
                     /locus_tag="VLA74_06460"
     CDS             1533..1826
                     /locus_tag="VLA74_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50385.1"
                     /translation="MKRKNLLFVLTISLYFLVLGTINISQSYSEVSLFSTNNAEQEEG
                     DQDIFSSLSRTLPEVVEENNEEKDSGEDSESEDSSTEEKDSGEDSESEDKGTE"
BASE COUNT          723 a          280 c          327 g          709 t
ORIGIN      
        1 gtattgctgc caccgttcct atatatgtct ctgttgaaat agaatctttg aaattagcag
       61 tcaacttatt attttgagtg acgttaattt taattggatt tttgttagtt gataccatat
      121 cagaccaaaa gtcaaaggac ttttctctag atgcatgagc tacacatgtt atctcattat
      181 tatgtggata taaaatggaa tgaattgatg gaaatttgta attattacat tcaactgttc
      241 ctgaattttc cggattaaca tttacagata aacgcactac aatttgatct agcttgctgt
      301 caattattga aattccattg agagctgtat tagatacata tatcacgttt gtatctgggc
      361 ttacagctaa tctactagct actaatggaa atgcgacctc aataggcaaa tcaagagagg
      421 ggtcgttact ttcatagttt tctgctattt tagttcccat agagatatct tttattttct
      481 cactagtcgt tgcattaata acagaaacag tattgtctcc aagattggat acatatattt
      541 tgtttgttat aggatttgcg gcaatatcta ctggagattt accaactttg actgtagatt
      601 ttattttatt tgttttagca tcaattatcg atactgtatt cgaaacataa tttgcggcat
      661 acaatatgtt tgtttttaaa tctatataca aaccggtagg gacaattcca actgtgatgt
      721 tatttaaaac ttgatttgtt tttccgtcta ttatagatac agtagaatta tcgatattag
      781 aaatatatat tttgtttgtt ataggattta ctgttatacc ataaggaata taattcagct
      841 ttattgtctt tattacattg ttatttatgc catctataat agacagggat ttagaatcaa
      901 gatttgttac ataaatgagg tttttggatg gatttacaga tattcctact ggtgatgatc
      961 caactcgaac atcggaaagc ttttgattgg tagaaccatc tattacagat actgtagctg
     1021 atcctcgatt ggtcacatat attctattat taaaaggatt aatgtccaga tcatatggaa
     1081 aattatctac tcggatcgtg tttacagtct catctgtttt gctatctatt actgaaatag
     1141 tattagagaa ttgattggca acataaatca tacctgttaa tggatttata tcaacaccga
     1201 ccggatagct gccaactact aacatagatt ttccattact acctgtcaat tcttcatctg
     1261 tctgtgcaaa tataaaagag aaagaaagaa gcaaaataat aagagacgaa aagaaaatca
     1321 taaatgaaag tgataaaaat ttaaaactca tgataatcca gatccagtaa tattaaatca
     1381 gtttagggtt ataaaagtaa tattctattt ctgatcataa tcatctagta tatttactaa
     1441 aaaatcattc tataagatta taacctaaaa aatattgtaa gtacttatat aaaatgaata
     1501 tctatgaata ttatatctaa gaggtataga gaatgaaaag gaaaaatctt ctgtttgtat
     1561 taacaatttc cctatacttt ttagtattag gaacaattaa tatttctcaa tcttactcgg
     1621 aggtaagtct tttttctaca aataatgcag aacaggaaga aggagatcag gacattttta
     1681 gtagccttag tagaacgctc ccagaggtag tggaagaaaa caacgaagag aaagatagcg
     1741 gtgaagattc tgaaagcgag gattccagta cagaagagaa agatagcggt gaagattctg
     1801 aaagtgaaga taaaggaaca gagtaaacct attatcgatt ctaaattgaa agagatttaa
     1861 aatttttaaa aaacaataat cttttttaat tttgaaataa agaatttatc tggatcatta
     1921 gataataatt aatgtatgag caaaagcaaa atcaatatca aaatcaaaag caatctgagc
     1981 aagaataatg ctttaagata cgcattaatt tcctcaatta ctgtagttat ttatctaat
//
LOCUS       DATIAS010000319         2458 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_739395, whole genome shotgun sequence.
ACCESSION   DATIAS010000319 DATIAS010000000
VERSION     DATIAS010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2458
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_739395"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VLA74_06465"
     CDS             complement(<1..502)
                     /locus_tag="VLA74_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HSF50386.1"
                     /translation="MALDTGDTAWMIVATGLVMLMTPGLGFFEAGLIRFKNGLSAIMH
                     TFSGLAILSTLWFIVGFTLVFGPTQGGIIGGLDHIFYNGVGIHEGYGINVTIPGVTFA
                     TYQMMFAVITPLLISGAFAERLKYSSFFIFAIAWSLFVYFPLAHWIWGGGWLFQLGVW
                     DFAGGIV"
     gene            complement(609..1739)
                     /locus_tag="VLA74_06470"
     CDS             complement(609..1739)
                     /locus_tag="VLA74_06470"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HSF50387.1"
                     /translation="MIPINRPWIDNEEKQEIIKVLDENALTSAARDGGKRVQEFESSL
                     RSFLDVKHVIAVNTGTAALHAALLALDIKADDEILLPSFTFVATANSVVASGAKPVFV
                     DINTKDYTIDLQDLKRKISKKSKAILPVHLYGHPSDLYELNEIANQYSLYIIEDACQS
                     LGSIYKNKQTGTFGTMGCFSMYAGKVMTSGEGGAIVTNDDKIADTLKMIRNHGMVEGY
                     DTRILGLNYRLPELSAAIAKIQMKKLKTFLNLRRRNSLLLSNLLETIISKYNIKIPEE
                     DQIKKFNWYLYTLAFNKSDNINLRDYIKKKLIENGIGAAVYYDPPVHKTPFYQRFSMN
                     NDLQNTNWSSKHVLSLPVHPGVSEMDIQNMVNVLKRELQNIL"
     gene            2072..2195
                     /locus_tag="VLA74_06475"
     tRNA            join(2072..2126,2148..2195)
                     /locus_tag="VLA74_06475"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2123..2125,aa:Ser,seq:tga)
     gene            2277..>2458
                     /locus_tag="VLA74_06480"
     CDS             2277..>2458
                     /locus_tag="VLA74_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50388.1"
                     /translation="MDKRLVVVTILVVTSAIVTIFVSPLDTTVPIPEPSFLNNTTNSN
                     KGIEIIAENLSTPWAI"
BASE COUNT          854 a          409 c          338 g          857 t
ORIGIN      
        1 ttactatacc accggcaaag tcccatactc caagctgaaa taaccatcca cctccccaga
       61 tccaatgagc taatgggaag taaacaaaca ggctccaagc tatagcgaat atgaaaaagg
      121 aactatattt cagtctttcc gcaaacgcac cagaaatcaa tagaggagta ataacagcga
      181 acatcatctg atatgttgca aaagtcactc caggaattgt aacatttatt ccatatcctt
      241 catgtattcc taccccattg taaaatatat gatctaatcc tcctattatc ccgccttgag
      301 taggtccaaa gaccaaagta aaaccaacaa taaaccacag ggtggataga attgccagcc
      361 cagaaaatgt gtgcattatt gctgaaagtc cattcttgaa tcggattaag ccagcttcaa
      421 agaatcccaa accaggtgtc atcaacatga caagtcctgt tgcgactatc atccatgcag
      481 tatcaccagt atctaacgcc attcctgttg ctaagtcacc acacagtatt ataaaaaagt
      541 ttgtcctaga gtaataaaaa attaatttaa taatattatt taaaaataat tataatcttt
      601 taatttattt ataaaatatt ttgtaattcc cttttaagta catttaccat gttttgtata
      661 tccatttcag acacccctgg atgaactggt aatgataaaa catgtttgct tgaccaatta
      721 gtattttgta aatcattatt cattgaaaat ctctgataaa aaggagtttt atggacaggt
      781 gggtcataat aaacagctgc tcctattcca ttttctatta attttttctt gatataatct
      841 cgcaaattta tattatcaga tttattaaat gctagtgtat aaagatacca attaaatttc
      901 tttatttgat cttcttcagg aattttaata ttatattttg atattattgt ttctagtaaa
      961 ttggataata ataaagaatt tcgtcttcta agattcaaaa atgtttttaa ttttttcatt
     1021 tgtattttag ctattgcagc acttaattca ggaagtctat aattaagtcc taatatccgt
     1081 gtatcatatc cttcaaccat gccatgattt ctgatcattt ttaatgtgtc tgctatttta
     1141 tcatcatttg ttacaatagc tccgccttca ccagatgtca tgactttgcc agcatacata
     1201 ctaaaacatc ccattgttcc aaaagttcct gtttgtttat ttttataaat tgatcctaat
     1261 gattgacaag catcttcaat aatataaaga gaatactgat ttgcaatttc atttagttca
     1321 taaagatctg aaggatggcc gtatagatga acaggtaaga tagctttact ttttttagaa
     1381 atttttctct ttaaatcctg aagatcaata gtataatctt tagtattaat atctacaaat
     1441 actggtttag caccagatgc aactacagaa ttggcagttg ccacaaaagt aaaggaagga
     1501 agcaatattt catcatcagc cttgatatca agtgcaagta atgctgcatg caaagcagcc
     1561 gtaccagtat taacagcgat aacatgttta acatctaaaa agcttcttaa tgatgattca
     1621 aattcttgaa ctcttttacc gccatctcga gcagcgctag taagagcatt ttcatcaagt
     1681 actttaataa tttcttgttt ctcctcatta tctatccaag gtctattaat aggaatcaat
     1741 tttaactatt ttatgtgatt aagaatatta aataagtgtt tttggtaaaa actattaatt
     1801 tatttaccat tgttatatat cgttatacac attaaactat atttaataaa aattggaaga
     1861 ttagatcatt tttataataa taaattgtaa tttttacaat tcataaataa aactaataaa
     1921 tttaaataaa tattttctat aaaaaacatt gtattagtat tataattcaa taagatactt
     1981 tacaaatcgg ttaattcaat agttataggt attatgagta tatattagaa ttattaaaat
     2041 ataatagtag gctattcaac ttatcttttg tgcagatgtg gcagagtggt cttctattca
     2101 gaacacaata atgcgtcggc cttgagtaat cttcaaggtt atgagcaagc cgattcgcct
     2161 tcgggcgatc aggagttcga atctcctcat ctgcgcttta tgttaaaaga attactaatt
     2221 aattttataa ctagagatga aatttattag actttaacaa ttaaatttcc attaaaatgg
     2281 ataaaagatt agtagtggta actatattgg tcgttacaag cgcaatagtt actatttttg
     2341 tatctccttt agatactact gttcctatcc cagagccttc attcttgaat aatacaacaa
     2401 attcaaataa aggtattgag ataattgcag aaaatctatc aacaccatgg gcaataga
//
LOCUS       DATIAS010000320         3024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1284038, whole genome shotgun sequence.
ACCESSION   DATIAS010000320 DATIAS010000000
VERSION     DATIAS010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1284038"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VLA74_06485"
     CDS             complement(<1..352)
                     /locus_tag="VLA74_06485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50389.1"
                     /translation="MKAGIKVEKDATLYINSNDVIWLKIVPSKGTPNAIEVDGSLKVD
                     SVKITSWDPETDDYVKFPKEVKYVDEASAEEIYASILRPYIKVNLDATGPTIIQNSEL
                     AYLGYDCAGCGGITF"
     gene            complement(371..595)
                     /locus_tag="VLA74_06490"
     CDS             complement(371..595)
                     /locus_tag="VLA74_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50390.1"
                     /translation="MNSIKISLFSTMILSIFSITILISIPNARAEENSCISFDAKENE
                     ISISCKYANFIDIEDKLQNKTLLYFEPSTN"
     gene            951..2321
                     /locus_tag="VLA74_06495"
     CDS             951..2321
                     /locus_tag="VLA74_06495"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF50391.1"
                     /translation="MFVNGNNNNHKFHFIYVWSLILFVFYITNDLVLNSPFENTHAIE
                     TNNYDDNDDNNDNGSIESDLNYIFDPNDYLEEDITPYQNNNNNNNSSRNAQIKQSVES
                     KINDNNQIKLSDDNNINSNEKIKDEPFAQALDATIDTDTTTNTNKNTNFNFVAVGDWD
                     CNDEAEDTVENIIDKDPELVLALGDLSYNGDAECWLELIEPIADKTKIVIGNHEVDSK
                     DLTEDYMEYFGLKEQYYSFNYKNMHFLALSTQTDYDEDSEQYKFAIRDLEKYSNDPFI
                     DWVIVFYHDHMYGSGSLEEETDFREIYHPLFDKYKVDIALQGHHHVYERTYPITFNNE
                     DDDEPIVHNNIPNIYKNPKLWSFLTTTFNNDKYNENAEFLEQYDNPNIYKNPNGTVFV
                     TVGTGGAHDMVLSSLEDFSAEGIDGTFGILDIALGNDQKTLTGIFIENGMKKEVMDEF
                     KIIKED"
     gene            complement(2686..>3024)
                     /locus_tag="VLA74_06500"
     CDS             complement(2686..>3024)
                     /locus_tag="VLA74_06500"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50392.1"
                     /translation="NTSKTRNSNDFINHLNSIKRYVRKRSIKRFILVIDNASFHVSNK
                     TKQFMERQSTWLTVLFLPTRAAFLNLVETKVNRNLKKDICANYNYETEENLLCTVRRY
                     LRCMGSWPKI"
BASE COUNT         1103 a          392 c          406 g         1123 t
ORIGIN      
        1 agaaggtaat tccaccacat ccagcacaat cataacccaa atatgcaagc tcagaatttt
       61 ggattattgt tggacctgtt gcatctaaat ttaccttgat atagggtcta agaattgatg
      121 cataaatctc ttctgcagaa gcctcatcta catattttac ctcttttgga aattttacat
      181 aatcatctgt ttcaggatcc catgatgtta tctttactga atctactttc aaacttccat
      241 ctacttcaat tgcattagga gtacctttgg atggaactat cttaagccat atcacatcat
      301 ttgaattgat ataaagagtt gcatcttttt caactttaat accagccttc aatatccaaa
      361 ctttttcctt tcaatttgta gaaggttcaa aatataataa ggttttattt tgcaatttat
      421 cttctatatc tataaaattt gcatatttac aagaaattga tatttcattt tcttttgcat
      481 caaaagaaat acatgaattt tcctctgctc tagcattagg tattgatatt aatatagtaa
      541 tagaaaatat agatagaatc attgtagaaa acaatgatat tttgattgag ttcattttat
      601 ttactacctt cttttaccct tgaaattttc tctattaaca tttgataaga aatattatca
      661 ataatttaat actaaaatag taaaattaaa atattataat aattaatctt ataattttac
      721 ttattttgga atactatctt aaatatagta atatattatt atttaattat aaatataata
      781 tttagtgaat aattagtaaa tattattatt atttaatctt atcttacaaa tataaaaatg
      841 actttaacaa tatctcaaca atattagaat actataatat aattttctta cataaggaaa
      901 tagagataat attattatag ccactttaaa gatatatctt gtttgttttg atgtttgtaa
      961 atggtaataa taataatcac aaatttcatt ttatttatgt atggagttta atattatttg
     1021 ttttttatat aacaaatgat ttagttttaa actcaccttt tgaaaacact catgcaattg
     1081 agactaataa ttacgatgat aatgatgata ataatgataa tggaagtata gagagtgatt
     1141 tgaattatat atttgatcct aatgattatt tagaggagga tattactcct tatcaaaata
     1201 ataataataa taataacagc agtagaaatg ctcaaataaa acaatctgtc gaaagtaaaa
     1261 ttaatgacaa taaccaaata aagttatctg atgacaataa tatcaattct aatgaaaaaa
     1321 taaaagatga accttttgcc caagcattag atgctactat cgataccgat accacgacaa
     1381 atacaaataa aaatactaat tttaactttg tagctgtagg agattgggat tgcaatgatg
     1441 aggctgaaga tacagtagaa aatatcattg ataaagatcc agaactagtt ttagctcttg
     1501 gtgatttatc atataatgga gatgcggaat gctggttaga attaatagag ccaatagcag
     1561 ataaaactaa aatagtaata ggaaatcatg aagttgattc aaaagattta acagaagatt
     1621 atatggaata ttttggttta aaagaacaat actattcttt taattataaa aatatgcact
     1681 ttttagcatt atctacacaa actgattatg atgaagattc tgaacaatat aaatttgcta
     1741 taagagatct tgaaaaatat tctaacgacc cgtttattga ttgggtcatt gttttttatc
     1801 atgatcacat gtatggttct ggttctcttg aagaggaaac agattttaga gaaatttatc
     1861 atcctctttt tgacaaatat aaagtagata tagctttaca gggacatcat catgtatatg
     1921 agagaactta tccaattact tttaacaatg aagatgatga tgaaccaata gttcataata
     1981 atataccaaa tatctataaa aatcccaaac tatggagttt tttaacaact acttttaaca
     2041 atgataaata taatgagaat gctgaattct tagaacaata tgataatcct aatatttata
     2101 aaaatccaaa tggaacagtt tttgtaactg ttggaactgg tggagctcat gatatggtat
     2161 tgtcttcctt agaagacttt tctgctgaag ggatagatgg tacatttgga atactggata
     2221 ttgcattagg aaatgatcaa aagacgttaa caggtatttt tattgaaaat ggaatgaaaa
     2281 aagaagttat ggatgaattt aaaataataa aagaagatta aaaaagttaa atcttaaatt
     2341 taataaccaa caatcatttt tatggctgta ttaatttaag ataaatttat cacctctttt
     2401 tgtaactgaa tattgaaatc attcttgtat attatatcat tatacataga tacaaagaat
     2461 tgtatccaat tatgtacatg taataggtta cattcatctt ttagcatacc tgtggatagt
     2521 aatcatcaaa agattcagct ctatctttaa aatattggtt gactctttcc atcaaacttt
     2581 tatctaatgg cgaatgtaaa taatagatct tttgcgtaat tagataaaat ctacagtata
     2641 ttttcattgc aattcaatta cagttattat ctgctaagtt aagtatcata tcttaggcca
     2701 actacccatg catctaagat accttcttac agtacataaa agattttctt ctgtttcgta
     2761 gttgtagttt gcacatatgt ctttcttgag attcctgttt acttttgttt ctactaaatt
     2821 caggaatgct gcacgtgttg gtagaaatag tacagttagc catgttgact gtctttccat
     2881 aaactgtttt gtcttgttgc ttacatgaaa tgatgcattg tctattacaa gaataaatct
     2941 cttgatactt ctttttctga catacctctt tatactgttt agatggttta tgaaatcatt
     3001 gctgtttctt gtcttgcttg tatt
//
LOCUS       DATIAS010000321         2529 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1556422, whole genome shotgun sequence.
ACCESSION   DATIAS010000321 DATIAS010000000
VERSION     DATIAS010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556422"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VLA74_06505"
     CDS             <1..670
                     /locus_tag="VLA74_06505"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HSF50393.1"
                     /translation="KLPRVSTSELVLQEALDYARREYQANTVMIRLSDIEFRHCEGYY
                     SRNEMACTWPCSISEMDSNDGMNDIYRKMILWADIVVVSTPIRWGNASSLYYKMIERL
                     NCVQNQITLHNRVLVKNKVASFIITGGQDNIQSVAGQMMMFFSELGFALPPYSFMGWS
                     RGWIAEDMEHNVQQFKKSRYIKRSLRDLVDNDIKLLRQLKGDPCIHINFPQPKIVDAS
                     SYNK"
     gene            691..1410
                     /locus_tag="VLA74_06510"
     CDS             691..1410
                     /locus_tag="VLA74_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50394.1"
                     /translation="MDRNVISYNKIIPLRNSCRVIAKIKSQQIESLPHFGHEALFFHN
                     NAVTTGLMNNTRELKIDLFSGLLLSYNNEDTIQIDLISKNIQDINDFFTNNFGLSISQ
                     EITNLDSQELQNYYYFVSKANLSLEIFRMGLTGKFTLVHLWPHGFDLSVEWFTGFEDQ
                     QIGIGISPGEENISLPYLYINPYPFNQKIKDEKLPLGEWHDKSWKGIKVEWNEISSKN
                     EKEIASVISRLFKITCKNFTK"
     gene            complement(2072..>2529)
                     /locus_tag="VLA74_06515"
     CDS             complement(2072..>2529)
                     /locus_tag="VLA74_06515"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HSF50395.1"
                     /translation="HMNFSHNYEKYNDDDIEYVDYFAILTGREEVPQVYTLDTALATF
                     QSQDNSDLKFSVKITEMSKIKQVNIDIGKSSEREEIVAELYKSETPSEEVTGKLCEGD
                     ISSQDLKGQLEGKDTKELLRKIEHGKAYVNILTEDKPNGKIRGKIKKLS"
BASE COUNT          906 a          356 c          399 g          868 t
ORIGIN      
        1 gaaattacct agggtttcaa catcagaatt agtattgcaa gaagcactcg attatgctag
       61 gagagagtat caagcaaata cagtaatgat aagactttca gatattgaat ttaggcattg
      121 cgaaggatat tatagtagaa atgaaatggc atgtacttgg ccttgctcga tatccgaaat
      181 ggatagtaat gatggaatga atgacatata tcgaaaaatg attctatggg ctgacatcgt
      241 cgtagttagc actcctattc gatggggtaa tgcctcctca ctttattaca aaatgattga
      301 aaggttaaat tgtgttcaaa atcaaataac attacataat cgtgttttag taaagaataa
      361 agttgcaagt tttataataa caggtggcca agataacata caaagtgttg ctggacaaat
      421 gatgatgttt tttagtgagt taggtttcgc attgcctcct tattcattta tgggatggag
      481 tagaggttgg atagctgaag atatggaaca taatgtacaa caattcaaga aatcaaggta
      541 tatcaagaga tctttaagag atctagttga taatgatata aaattattaa gacaactgaa
      601 aggagatcct tgtatccata ttaatttccc tcaaccaaaa attgttgatg cttcttctta
      661 taataaataa acttctcaaa gggatagcaa atggatagga atgttatttc ttacaataaa
      721 attatacctt tgagaaatag ttgtagggta attgctaaaa taaagtcaca gcaaatagaa
      781 tctttacctc attttggtca tgaagcatta ttttttcata ataatgcagt aacaactgga
      841 ctaatgaata atacaagaga acttaagata gatttgttta gtggcttatt attatcttat
      901 aataatgaag atactataca aatcgatttg atatctaaaa atattcaaga tataaatgac
      961 ttctttacta ataattttgg tctatctata tcccaagaaa tcacgaattt ggatagtcaa
     1021 gaattacaaa attattatta ttttgtgtcg aaggctaatc ttagcttaga aatatttaga
     1081 atgggactga ctggaaagtt tacgcttgta catttgtggc cacatggatt tgacctatct
     1141 gtagaatggt ttactggatt tgaggatcag caaataggaa ttggaatatc tcctggagaa
     1201 gaaaatattt ctttacctta tctgtatatc aatccttatc cattcaatca aaaaatcaaa
     1261 gacgaaaaat taccattagg agaatggcat gataaatcat ggaagggaat aaaagtagag
     1321 tggaatgaga tctcctctaa aaatgaaaaa gaaattgcat ctgtcatctc ccgattattt
     1381 aaaataacat gcaaaaattt tactaaatga tattgtaaaa aggctccgtt aagttaagca
     1441 gtaaaaaacc ttagccaaga atatactatc gattaattga aaattagatt tgaaagaaat
     1501 agaacatcta caattatcgt gatgtagtct gtttatctat attttcttgg tataagttta
     1561 aggaatacat ctaaagcact acatcctttt gaaggtcaaa aaagaagtta tgttgctata
     1621 tgggattgga ttcaatgatt tggttcattg cagatataaa acaaacatag aaggatttcc
     1681 gtattcattt caataattag ataatagata agtatttgta attagtgttt attttactat
     1741 actcataaag ttttcatttc tctaccttgt actaataatt tgataaatac gcttagataa
     1801 tttaggaaaa cttttccaag ggctattatt gtttttttag tgataatata aaaataactt
     1861 tagagatttt accattcaca atacaaagct aataataatc aaaattttgt tagtcaacaa
     1921 gattcctatt aaaaagcatt aaatcatttc ccaaaattag agaaatctat gctataactg
     1981 aaagatggta atgaataact aataaccttc aattaaagag gattataaga acaaagacag
     2041 gtagaaacct tagtagaata atgaaaacat tctaacttaa tttcttgatt tttcctctga
     2101 tttttccgtt tggtttatcc tctgttaaaa tgtttacata agcttttccg tgctctattt
     2161 ttctgagcaa ttccttcgta tcttttcctt ctaactgacc tttaagatcc tgtgaactta
     2221 tatccccttc acataatttg ccagtaactt cctctgacgg agtttccgat ttatacaatt
     2281 ccgcaactat ttcttctctt tcagaggatt ttcctatatc aatattgact tgctttatct
     2341 tgctcatctc tgtaatctta acagagaatt ttagatcact attatcttgg gattgaaatg
     2401 ttgctaaagc agtgtccaat gtataaactt gtggaacttc ctctctacct gtaagtattg
     2461 caaaataatc aacatattca atatcatcat cattatactt ttcataatta tgagaaaaat
     2521 tcatgtgtt
//
LOCUS       DATIAS010000322         5325 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1556737, whole genome shotgun sequence.
ACCESSION   DATIAS010000322 DATIAS010000000
VERSION     DATIAS010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5325
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556737"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(414..1406)
                     /locus_tag="VLA74_06520"
     CDS             complement(414..1406)
                     /locus_tag="VLA74_06520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50396.1"
                     /translation="MIHKIIGIVISTIFFVILLEYVLISELYGEDLAMDEKVNITILK
                     DNNNIQIIPAKIGIKPNLWKDHSLDDYSYDPKKIAPLNTKRYDGVIHIESIYDREFTL
                     ENFLDIWGFDKSKIIDVFVDNKNKEDYKELSLDDGQKLKIVIKKEDISYQNFTKYNDS
                     KISFEYPSEWKLLNSSSESQTKYHYSYGSLLSPNEKFRNLIELFPQEFQYMTTPLLTI
                     RITELYSNITLDDYYNENIHKLLQANETNFPKLINKPDYTINGNPALMINLNTTLVAQ
                     PGLNNIGNSINQTSFHIWTIKKGYFYDISFEAFESAYEEYYPIINKIIESIQIN"
     gene            complement(1475..4603)
                     /locus_tag="VLA74_06525"
     CDS             complement(1475..4603)
                     /locus_tag="VLA74_06525"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSF50397.1"
                     /translation="MNKVDKNFNNNNISYPNHLGKYILEPYIGPRSFTGSIEDRKRFF
                     GRDDETEEIVSLISGHKLVLIYAQSGAGKTSIFNAQVIPSLKQSGYDIIGVTRVKSSI
                     SSEKIDINHIHNVYIFNALHTLQPELDLNLIKDKSLMEFLKDSINKKKDNTRKQQILI
                     FDQLEEIFSIFPKDLKKQRKDFFIQISEALNNISSLQIVFIIREDYLAQLDPYSNLLP
                     EKLRPRFRLERLREDAALLAIKGPLENIPEDFIQNNMESIDEDIKFIIEQLMEIKVEY
                     APGKINEIEGEFIEPIQLQLVCQRWWENFINSDGKTRKQNKINVTDVDNALKYFYEKS
                     IKEVTKKTGLSEGEVRKWCDENLITLSGTRNIIHTSGLKNDIVDILSKNYLIKENWLA
                     GSKWYELTHDRLINPIRISNTIWKKEQEKRKKSKIKKILIASSVVVVILCVWYINQYD
                     TPITNLIPAGELPYIASVNPTTGLVYLTNPKSDSISIINGKKNYLLDHIKVQDEPTGI
                     AVDSKKNKVYVSHRLNNTISFIHLNHPFLFFIPPSWTSWIKSDITDIPINHTASFLAI
                     NSNTSKLYANAVNSNFISVIDTNNFNVTKIKVGNRPIAIDVDSSNNKIYVANSKDNSV
                     SVIDGTTNKEITKIPVGKNPSSLAFNPNDNKVYVNNKEDNTVSVIDGTNYDVIKKIEV
                     GKSPSSITINPYHNKIYVANFLDNTVSVIDGENNMAVATLNVGKRPTSIDMNMEQNIL
                     YVTNNLDNNVMAIGMNHDLPRKVLDTIPVGNNPLGLTKDNKTKMVYVANTDSNSVSVI
                     DGKTNMKVKEFLVEEKPRDIAIHSKNGKIYVSNSLSDTISVIDLKKENLIPTHIFTKG
                     NYPSAIAVNDNKNLIYVANTDSDDVSVIDGTTNKLLKEPIKVGNGPSGIAIDQKNNLI
                     YVTNYQSDTVSIIDGKSKKIINGSIPLRWQSTYFGNGPLAIEIDENNNYLYIVNTFSD
                     NVLIIDIKTIQDVLQNNNGTIDNMTKYITTNIPVGDSPTDISLDFINKQIYVTNSDED
                     NINRISIPSIFI"
     gene            complement(4605..>5325)
                     /locus_tag="VLA74_06530"
     CDS             complement(4605..>5325)
                     /locus_tag="VLA74_06530"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HSF50398.1"
                     /translation="RLEQFEREKKPDFSLEKYKKSPHAILAQFDLPIYITTNYDHFME
                     YALESQAGKELFTEICRWNDELIKATENELIPSVFAKINKRYRPSPSKPFVYHFHGSF
                     KYPGSMILTERDYFDFVIYTNREKEQDILPPFFRQALISSSLLFIGYNLEDIVFRSIF
                     QGGLIFMSTVPKNKNSFAVIQIPSNEKDKKKNDKMIKYLKKYTENMFKIFVYLGDTNE
                     FMKELLDKWKIFKAKGSLSNP"
BASE COUNT         1747 a          767 c          679 g         2132 t
ORIGIN      
        1 atatagattc caagcacaga actgtgtatt ggttcaatac aaaaccatag tcaaaaatgc
       61 tggttaccga tttgaataac tgtttcgtct atgataaaga cagaaactct ttttctttta
      121 tagatctgac aggatccaaa cctttgaatc caattccata cagatacgta acttctttgt
      181 ttatctttaa agagtattaa cgctttagac gtatttctta aactcaaccc aagaaaatac
      241 agatacagag aatacattac gataattgag gatgttttat ttctttcaaa cctaattttc
      301 atataataaa tagaatgttc ttagctatag cttttgctgc ttaacttaac agagcctttc
      361 aataatataa cttaatgcaa ggagaaaaaa aaattatcac aaattttatt ttactaatta
      421 atttgtattg attcaattat tttatttatt ataggataat attcctcata ggcagattca
      481 aatgcctcaa aagatatgtc ataaaaatat ccttttttta tagtccaaat atgaaaagat
      541 gtttgattta tgctgtttcc aatattgttc aaaccaggtt gcgcaactaa agtagtattc
      601 aaattaatca tcaaagcagg attaccatta atagtataat ctggcttatt tatcaattta
      661 ggaaaattag tttcatttgc ttgtaataat ttgtgtatat tttcattata gtagtcatct
      721 agagtaatat tagaatatag ttcagtaatc cggatagtga gaagaggtgt ggtcatatat
      781 tgaaactctt gtgggaataa ttcgattaaa ttacgaaatt tttcatttgg tgataatagt
      841 gatccatatg aataatggta ttttgtttgt gattctgatg aagaatttag taatttccat
      901 tctgaaggat attcaaaaga tatttttgaa tcattatatt tggtaaaatt ctgataagaa
      961 atatcttctt ttttaataac tatttttaat ttttgaccat catctaatga taattcttta
     1021 taatcttctt tatttttatt atctacaaat acatcaatta ttttactttt atcaaatccc
     1081 catatatcta aaaagttctc taaagtaaac tctctatcat aaatcgattc gatatgaata
     1141 actccatcat atctctttgt atttaaaggg gcaatttttt taggatcata actataatca
     1201 tccaaggagt gatctttcca caaattaggt ttgataccta ttttggcagg aattatttga
     1261 atgttattgt tatcttttaa tattgtaata tttacttttt catccatagc taaatcttca
     1321 ccatataatt cagagatcaa gacatattct aataaaataa caaaaaatat agtactaata
     1381 actattccta taattttgtg aatcatgttc tctctataaa tatatactaa ataaatcatc
     1441 tccttttaat cattatcttg ttcttcctta aaagttatat aaatattgaa gggatactaa
     1501 ttctatttat attatcttca tcactattag taacataaat ttgtttattg atgaaatcta
     1561 atgatatatc agtaggagaa tcacctacag gaatattagt tgttatatat tttgtcatat
     1621 tatcaatagt accattatta ttttgtaaca catcttgaat tgttttaata tctataataa
     1681 gtacattatc gctaaaggtg tttactatat agagatagtt attattttca tctatttcta
     1741 tagctaatgg accatttcca aaatatgtac tctgccatct tagaggtata cttccattaa
     1801 tgattttttt tgactttcca tctattattg atactgtatc actttgataa ttggttacat
     1861 atatcaaatt attcttttga tctattgcta tacctgatgg accatttcca actttaattg
     1921 gttcctttaa caatttatta gttgttccat ctataacgga tacatcatct gaatcagtat
     1981 tggctacata tattaaattt ttattgtcat taactgctat tgcagaggga tagtttcctt
     2041 tagtaaaaat atgagtaggg attaaatttt ctttctttag atcaataaca gatatggtat
     2101 cagaaagaga attagataca tatatcttac catttttact atgtatagcg atatctctag
     2161 gtttttcttc taccagaaat tcttttactt tcatgttagt ttttccatct ataacagata
     2221 cagaattaga atcagtatta gctacatata ccattttggt tttattatct tttgttaatc
     2281 ctaatggatt attacctact ggaatagtat ccaaaacttt tctcggtaaa tcatgattca
     2341 tacctattgc catgacatta ttatctaggt tatttgtaac atataatata ttttgttcca
     2401 tattcatatc aatacttgtt ggtctctttc ctacatttag agtagctacc gccatattat
     2461 tttctccatc tataacagat acagtattat ctagaaaatt agcaacgtat atcttattat
     2521 gataaggatt aattgtaata ctactaggac ttttacctac ttcaattttt tttattacat
     2581 cataattagt tccatctata acagatacag tgttatcttc tttattatta acgtatactt
     2641 tattatcatt aggattaaat gctaagctac ttggattttt tccaacaggt atttttgtta
     2701 tttctttatt tgtagttcca tctataacag atacagaatt atccttagaa tttgcaacgt
     2761 atatcttatt attacttgaa tcaacatcta tagcaattgg cctattccca acttttattt
     2821 tcgtaacatt aaaattatta gtatcaatca cagatataaa attagaattg acagcgtttg
     2881 catataattt ggaagtattt gagttaatag ctaggaaaga agctgtatga ttaatcggta
     2941 tgtctgtaat atctgattta atccatgaag tccatgaagg aggaataaaa aagaggaaag
     3001 gatggtttag atgaataaat gatattgtat tatttaaacg atgtgagaca tatactttat
     3061 ttttctttga atctactgct ataccagttg gttcatcttg aacttttata tggtccaaca
     3121 aataattttt ttttccattt ataatagaga tactgtcact tttaggattt gttagatata
     3181 ctaatcctgt agttggattg acagatgcaa tataaggtag ttctcctgca ggaattaaat
     3241 ttgttatagg tgtatcatat tgattaatat accatacaca taatataaca acgactaccg
     3301 atgaggcaat tagaattttc ttaatctttg atttctttct tttttcttgt tcttttttcc
     3361 atatggtgtt agatattcta attggattaa ttagcctatc gtgggttaat tcataccatt
     3421 ttgaacctgc aagccaattt tcttttatca aataattttt cgaaagaata tcaacgatat
     3481 catttttaag gccagaggta tgaataatat ttctagttcc tgaaagtgta attaaatttt
     3541 catcacacca ctttcttact tcaccttcag ataggccagt tttttttgtg acctccttaa
     3601 ttgatttttc ataaaagtat tttaaagcat tatcaacatc agtaacattg attttatttt
     3661 gtttacgggt tttaccatca gaattaataa aattttccca ccatctttga cataccaatt
     3721 gaagttgaat aggttctata aattcacctt ctatttcatt gatttttcca ggagcatatt
     3781 caactttaat ttccatcaat tgctcaatta taaattttat atcttcatca atactttcca
     3841 tattattttg aataaaatct tccggaatat tctccaatgg accttttatt gctaataaag
     3901 ctgcatcttc acgtaatctt tcaagtctaa aacgtggccg taatttctca gggagcaagt
     3961 tactatatgg atctaattgt gctaaatagt cttctctaat gataaaaaca atttgaagcg
     4021 agctaatatt atttaatgct tctgaaattt gaataaaaaa atcttttctt tgttttttca
     4081 aatctttagg aaagatacta aaaatttctt ctaattggtc aaaaattaat atttgttgct
     4141 ttctggtatt atcttttttt ttatttatac tatcttttaa aaattccatc aatgatttat
     4201 ccttaattaa atttaaatcc agttcaggtt gcaaagtatg tagtgcatta aatatataca
     4261 cattatgaat atgattaata tctatttttt ctgaagatat tgatgatttg actcttgtaa
     4321 cacctattat gtcatatcca gattgtttca aagatggtat tacttgtgca ttgaaaatgg
     4381 atgtctttcc agctcctgat tgtgcatata ttaaaacaag tttatgacct gaaatcaaag
     4441 acacaatttc ctcggtttca tcatctcttc caaaaaatcg ttttcggtct tcaatagatc
     4501 cagtaaatga acgaggtccg atataaggtt ctaaaatata tttacctaaa tggtttggat
     4561 aagaaatatt attattattg aaatttttat ctactttatt cattttatgg attactcagt
     4621 gagcctttag ctttaaagat tttccatttg tctagtagtt ctttcataaa ttcattcgta
     4681 tctcccaaat aaacaaatat tttgaacata ttttcagtat actttttcaa gtattttatc
     4741 attttatcat tttttttctt gtccttttca tttgaaggga tttgtattac tgcgaaacta
     4801 tttttgttct taggtacggt agacataaaa atgaggcctc cttgaaatat tgatcgaaaa
     4861 actatatctt ctaagttata tccaataaat aataaagatg agcttattaa agcttgtcta
     4921 aaaaatggag gtaatatgtc ttgttccttt tctctattgg tatagattac aaaatcaaaa
     4981 taatcacgtt cagtcagaat cattgatcca ggatatttaa aactgccatg aaaatgatat
     5041 acaaaaggtt tagatggcga aggtctataa cgtttattta tctttgcaaa tacagaagga
     5101 attaattcat tttctgtagc tttaattagc tcatcattcc atctgcagat ttcagtaaaa
     5161 agttcttttc ctgcttgact ttctaatgca tattccataa aatgatcata atttgtggtg
     5221 atgtaaatag gtaaatcgaa ttgagcaagg attgcatgag gagacttttt gtatttctct
     5281 aaactaaaat caggtttttt ttcccgttca aactgttcaa gtctg
//
LOCUS       DATIAS010000323         2084 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1556799, whole genome shotgun sequence.
ACCESSION   DATIAS010000323 DATIAS010000000
VERSION     DATIAS010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556799"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VLA74_06535"
     CDS             <1..192
                     /locus_tag="VLA74_06535"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF50399.1"
                     /translation="WNTIIEDIIGDNKVESVRVKNIITEQISDIRTDGVFVAIGHKPN
                     TDLFKGQIELDERGYIKKV"
     gene            712..966
                     /locus_tag="VLA74_06540"
     CDS             712..966
                     /locus_tag="VLA74_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50400.1"
                     /translation="MKNKIIKSILLTVFSIMVLAIIGNSIQNTALAQSNSNDTSANQT
                     GKQQLQERQQLQERQHQQGQEGNQTAGTSGGQQLQERQHQ"
     gene            complement(1145..1360)
                     /locus_tag="VLA74_06545"
     CDS             complement(1145..1360)
                     /locus_tag="VLA74_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50401.1"
                     /translation="MSVETYQRFRSCQIYQRKRISAFIIDETIIQIGNHHFWIWFCIE
                     SIHNLVLGIYISKEKNILIAMIAVIVI"
     gene            complement(1418..1807)
                     /locus_tag="VLA74_06550"
     CDS             complement(1418..1807)
                     /locus_tag="VLA74_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50402.1"
                     /translation="MSKVIVIFIIAMIFLPIYSSLPFVSASQYDQSANEVNWMKMCLL
                     VQPALYKSCNEYVDNNGVLTIEGERAVVCIRDGAIIGLGSSKFGLPPILIFPGLDMLA
                     EMKGCDGIVNLQVLNTLDLPSIIQFFE"
BASE COUNT          818 a          301 c          290 g          675 t
ORIGIN      
        1 tggaatacca taattgagga tataattggt gataataagg tagaaagtgt acgagttaaa
       61 aatataatta cagaacaaat atctgatatc agaactgatg gagtatttgt agcaattggg
      121 cataaaccca acacagattt gttcaaagga caaatagaac ttgatgagag aggttatata
      181 aaaaaagtat gaagaaagta aaactaacat tgagggagtt ttcgttgcag gagatgttta
      241 tgattacagg tatagacaag ctgttaccgc tgctggctcc ggatgcaaag ctgctttgga
      301 tgtgataaat tatcttgaat caaaaaattg aatatctata caaataacta gataggaaac
      361 aatattttta tagtttgaaa acaatttatt gaaaagtaac tgaatccact ttatagaagg
      421 attcaaatcc cacagattcg aggtaattga tcggtaatta aataattaaa aaagtaaaaa
      481 ttaattctta gtgtatatca ctattgcttc atgaattcta taaacgatag gattgaaacc
      541 cagagttcaa tgggatcagt gggattttga taatccaata attaagattc tgtatctaga
      601 ctcttattgt aattcaatgc tttttgtttc tttcaataac aaatgaaaaa ttataaagat
      661 ataatgcaaa gttatatact tttttatatt atattgaata ttctttactt aatgaaaaat
      721 aaaataatta aaagcatttt actaactgta ttttcaataa tggttttggc tattattgga
      781 aattctattc aaaatacagc attggcacaa tctaattcta atgatacttc agctaatcaa
      841 acaggaaaac aacaactaca agaacgacaa caactacaag aacgacagca tcaacaagga
      901 caagaaggta accaaacagc tggaacatca ggtggacaac aactacaaga acgacagcat
      961 caataaagta atcaaatggg aacacaacag cagggtagac aaggtaatca gagttccgat
     1021 ccattagaac atttaggaga agcaattaca gcccctattt caataattta attaatatca
     1081 attttatatt acgttacatc ataaaataaa aaataattat attgattata tcattgccta
     1141 ttgtttatat tacaattact gctatcattg caataagtat atttttctcc ttagatatgt
     1201 aaattccaag tactaaattg tgaattgatt ctatacaaaa ccatatccag aaatgatggt
     1261 taccaatttg aattatagtt tcatctataa taaaagcaga tattcttttt ctttgataga
     1321 tctgacagga tctaaatctt tgatatgttt ctacagacac ttaaaataga ttatgactga
     1381 aaaaatatta attatgtgtg atgcattatc accattatta ttcaaaaaac tgtattattg
     1441 atggtaaatc aagagtattt aagacttgaa gattaacaat tccatcacat cctttcatct
     1501 ctgctaacat gtctaatccc ggaaatatca atattggcgg tagtccaaat ttcgaagatc
     1561 ctaatccaat tatagctcca tctcttatgc aaacaactgc tctttctcct tctattgtta
     1621 agactccatt attatcaaca tattcattac aggatttata aagagctggt tgaactaaaa
     1681 ggcacatttt catccaattc acttcatttg cggattggtc atattgactt gctgagacaa
     1741 atggcagaga tgaataaatt ggcagaaaaa tcatagcaat tataaaaatt actataactt
     1801 tactcattac caaataacat atattataat ataaaaacat tatatataat attgataaaa
     1861 taaaaaagtt cagaaaactt tcatatattc tttttaattt tttatataat tacaattttg
     1921 aggagatcgg ctctgtagaa accatcatag ctaacaacat tatataataa attattgaat
     1981 aaacaacaat ccaaatatgt tagattagca gaccaattat ttcgtattct caaacattgt
     2041 aggattccac tatatcttca tagaaagagc aatcacatct atat
//
LOCUS       DATIAS010000324         8890 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1012936, whole genome shotgun sequence.
ACCESSION   DATIAS010000324 DATIAS010000000
VERSION     DATIAS010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8890
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1012936"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1002)
                     /gene="twy1"
                     /locus_tag="VLA74_06555"
     CDS             complement(<1..1002)
                     /gene="twy1"
                     /locus_tag="VLA74_06555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-demethylwyosine synthase TYW1"
                     /protein_id="HSF50403.1"
                     /translation="MSCSDEHVYHENENNFIHITSSLEARLRKAKYGIFNHSAVELCH
                     WTKKSFYNEGNCYKHKFYGISTHQCMEMTPTAMNCENRCVYCWRPTEFYDTLLMPEEL
                     VDEPDAIVTQLLKERERLIVGFYGNSKSDKKKLDESLFPLHYAISLSGEPTMYPKLPG
                     LIKYLKSLENTKSIFLVTNGQEPEMIKKLIKEDALPTQLYLSTNASNKKIFYKINRPK
                     YKDAWDRWLNTLKIISEIGTRTVLRITLIRGYNDNLEDVSDFAELINIGNPNFIEIKS
                     YMHIGMSTQRLEQKHMLEMNEIRNFAEIMVKTLNEYELMDESEISRIVVLQNYSRYTD
                     "
     gene            1154..1690
                     /locus_tag="VLA74_06560"
     CDS             1154..1690
                     /locus_tag="VLA74_06560"
                     /inference="COORDINATES: protein motif:HMM:NF018627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50404.1"
                     /translation="MKTIAIDLDSVLADVMIIWIEEYNRIRGSNIIKNDITVWDIHNI
                     LPINEIECNILFSMVWKNRWKEIPPTNKNIEKIIRDLNKENRISIITKREKDTIPFVY
                     EWLKYNNIVYDDLLFVPDEIPKSVYPFNFLIDDYPNNLVDIKFPKKGILFDQPWNKNF
                     NWPRRIHSLEEIRIVICL"
     gene            complement(1701..2039)
                     /locus_tag="VLA74_06565"
     CDS             complement(1701..2039)
                     /locus_tag="VLA74_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50405.1"
                     /translation="MKNKKIIFDFDIRRIEGKNPTKSEKVLSNTKYIHEYYIEEIILR
                     QYIENYDTKLGNYYLFILYVKTNKGIVLMKYDEGYRGVDSFESTIEFIKKYTGVSSLL
                     NRAIIELEFS"
     gene            complement(2029..3402)
                     /locus_tag="VLA74_06570"
     CDS             complement(2029..3402)
                     /locus_tag="VLA74_06570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50406.1"
                     /translation="MAGLIAVYNYNGNKSSDTTIFYLIRGMRMLQHRGKAYWKLMIGD
                     NVIENRGSIPSDDVLLASIKKKKLSGLCAVGYLSKRSPLFPSMNLLDISIDGFLVDTE
                     KLYLHPHIGSAKKLDSLYQIFYIFMKLITEKKNSEQAAEFIDRHLRGNIIIKKKNEIF
                     IFRNSTGFKPLIMATDDHIVVISSENSLRISFPHLNYVNIKPGQLIKLSLKNHVQDLV
                     TLKDHKILLDPFEFIRESHVSSMFNNKSIYSIRKNIGKVQADRLPLEMDLDSIYAEPD
                     YTRPMALGMGLSLQNKFSKFEISEGVIKDRYDDSDHMIDFSEQVSKNKLLTTGKSLKF
                     IIENLTKNRKIATIQGTIQTGSTARETIYYLKKNGVKQVNVIVCYVPTIDGRQVGLYT
                     HNRDFLANKYVGKMSNLDQLNSFVSREIGCEKIFYNSPSLLAKGIGIPESNLWFPEWI
                     RFLEYEK"
     gene            3573..4775
                     /locus_tag="VLA74_06575"
     CDS             3573..4775
                     /locus_tag="VLA74_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HSF50407.1"
                     /translation="MFIGIIGKANVGKSTFFNALTDQAVTSANYPFTTIQPNIGISYV
                     RKKCVCREFGVQDNPIHSVCVDGNRFIPVKLIDVAGLVPGAHLGKGLGNKFLDDARQA
                     DALVHVVDASGSTDPEGHIIDQSKGDPLYDIKFVEEEFDRWLFSIVSREWNKISRDMI
                     SQKMKIEQILTKKLSGLSINMDNIVESLMELNLKNKNPDLWTEDELLSFVRIVRMKSK
                     PLLIVANKIDIKSSMKNIMKIKKEIDRIIIPCASEAELALRKGMKKGLWYYLPGDKDF
                     QIKKKDLNEQQEKAILMIKSILMENGSTGVQNAINTICFDLMKLIIVYPVEDDVKLSD
                     KNGNVLPHALLMPKGATAKDLAQAIHADLAKGFMFAIDVRNKQRIGAEYKLNDNDVIK
                     IVSSTSRG"
     gene            4781..5812
                     /gene="kae1"
                     /locus_tag="VLA74_06580"
     CDS             4781..5812
                     /gene="kae1"
                     /locus_tag="VLA74_06580"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061711 - N(6)-L-threonylcarbamoyladenine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex N(6)-L-threonylcarbamoyladenine
                     synthase Kae1"
                     /protein_id="HSF50408.1"
                     /translation="MIFNDSGEKLGFGIESTAHTFGCSVIKFKEPQKKGEILSEERSI
                     YKAPSGSGIHPREASRHHMNKAPEILRICLKEAKVTPKELDIISYSAGPGLGPCLRVG
                     AVVARTLSSFYNKPLIPVNHALGHIELGMMLTECKDPLVLLVSGGHTMILAFSNKRWR
                     IFGETLDITIGQLLDQFGRHMGLSSPCGNKIEELASQSSEEYIQLPYSVKGNDVSFSG
                     LLTYTKSLITEGKNEFDVCFSLQETAFAMLTEVVERALSFTGKKHVLIVGGVSANKRL
                     HDMLEQSSERQKAELRSCPLIYSGDNGSQIAWIGLCEYQTTGKITDIKKSFVNQSWRL
                     DSVDVNWRT"
     gene            complement(5853..6182)
                     /locus_tag="VLA74_06585"
     CDS             complement(5853..6182)
                     /locus_tag="VLA74_06585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50409.1"
                     /translation="MSSVKPRKGEKLILEEDCAEDRLKNGILTLTNQRIIFEKTEGTL
                     ATLSKQTGELLLDLPLDQIADCRAEGFIIKKLVITTLKNEIYKFGVFSNSKWTKEIEK
                     VKSNNLY"
     gene            6201..6830
                     /locus_tag="VLA74_06590"
     CDS             6201..6830
                     /locus_tag="VLA74_06590"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF011463.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex kinase/ATPase Bud32"
                     /protein_id="HSF50410.1"
                     /translation="MHILSLHRKLIKKGAEADIFLIAWYGRKAISKMRNPKQYRNKYL
                     DENIRKKRTLHEANMLSAVKNVDIKTPSLLFLDPLKAEIIMEYIDGHNVKDIMSSQLA
                     LDMGKYTSLLHNNNIVHGDLTTSNFIKSGNDLVIIDFGLSFFSDRIEDRAVDFRLIKE
                     ILSSAHIDIFDQAYQNFITGYSNNTNNNMKKILRVVSEIEKRGRYARIS"
     gene            7045..7617
                     /locus_tag="VLA74_06595"
     CDS             7045..7617
                     /locus_tag="VLA74_06595"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HSF50411.1"
                     /translation="MINLLFFVTSNSYKFLEVESILKKRLNSTKLQFYKHHIIEIQSD
                     DIEIIALEKARYAYDMVKQPIIIEDDGLFIKSLNGFPGQYSSYSFATIGNRGILKLMK
                     GESDRSAFFRSIFVYNDGIEIELFSGQICGKISTRLYKGGWGFDPIFIPEKSNMSLGR
                     LYIINKKNKFSHRRLTLEKFISWYNGKYPQ"
     gene            7902..8195
                     /locus_tag="VLA74_06600"
     CDS             7902..8195
                     /locus_tag="VLA74_06600"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50412.1"
                     /translation="MKNRSRYEVIAAIISSCIRMETRTKIMYKAMLSNDQCKLYIQFL
                     LKCGLINEVLNGEKRYYIITESGNKFLVNFEKLKEMLPSIMEGEIEEHHNLTI"
BASE COUNT         3187 a         1223 c         1398 g         3082 t
ORIGIN      
        1 atcagtatac ctagaataat tctgcaaaac aacaattcta gaaatttcac tttcatccat
       61 taattcatat tcattaagtg tttttaccat aatctcagca aaatttctta tttcattcat
      121 ttcaagcata tgtttttgtt ccaatctttg ggtagacatt ccgatatgca tataagattt
      181 tatttctata aagttgggat taccaatatt aattaattca gcaaaatcag acacatcttc
      241 caaattatcg ttgtaccctc taataagtgt tattcgtaat actgtccttg taccgatctc
      301 agaaataatt ttaagagtgt ttaaccatct atcccacgca tctttatatt ttggtctatt
      361 aattttataa aatatttttt tatttgaagc attagtagag agatacaatt gtgttggaag
      421 tgcatcttct tttattaatt tctttatcat ttcaggttct tggccattag taacaagaaa
      481 tatggattta gtattttcta aggatttcaa atatttgatc aaacctggta gtttaggata
      541 catggtaggt tctccggaaa gagatattgc gtaatgcagc ggaaacaaag attcatctag
      601 tttctttttg tctgattttg aatttccata gaaaccaaca attaatcgtt ctctttcttt
      661 caataattga gtcacaatag catcgggctc atcaactaat tcttctggca ttaataaagt
      721 atcataaaat tcagttggtc tccaacaata cacacatcga ttttcgcagt tcattgcagt
      781 tggagtcatt tccatacatt gatgggttga aattccataa aatttatgtt tataacaatt
      841 accttcatta taaaaagatt ttttcgtcca atgacataat tctacagccg aatgattgaa
      901 aatgccatat ttagcttttc tgagtcttgc ttctaaactc gaagtaatat ggataaaatt
      961 attttcattt tcatgataaa catgttcatc agaacagctc atttatagca ttaaagatag
     1021 tcaaactaat ttatacttta aaactaggtt gacagagtaa aatgtctttt ataaatattt
     1081 gttcgaatag cataatgaaa tctttaatac attgattact tttacatatg ggatcaaaaa
     1141 atattacaca tagttgaaga caatcgcgat cgatttagat tcagttttag ccgatgtaat
     1201 gattatttgg attgaggaat ataatagaat tcgtggttcc aacatcatca aaaatgatat
     1261 tactgtttgg gatattcaca acattttacc cataaatgag attgaatgta atattttatt
     1321 ttcaatggta tggaaaaata gatggaaaga aataccgcct acaaataaaa atatagaaaa
     1381 aattataagg gatttgaata aggaaaatag aatttcgata ataactaaaa gagaaaagga
     1441 tacaattcca tttgtatatg agtggctgaa gtataataat atagtatatg acgacttatt
     1501 atttgtgcct gatgaaattc cgaaaagtgt atatccattc aattttttga tagatgatta
     1561 tccaaataat ttagtagata ttaaatttcc aaaaaaaggg atattgtttg atcaaccgtg
     1621 gaataaaaat tttaattggc ctagaagaat tcactcccta gaagaaataa gaatagttat
     1681 ttgtttgtag tacaaattag ctaagaaaat tccaattcta taattgctcg gtttaaaagt
     1741 gaggaaacac ctgtatactt tttaataaat tctattgtag attcaaacga atcaacacct
     1801 ctatatcctt catcgtactt catcaataca atccctttat ttgtcttaac atatagtata
     1861 aataaatagt aatttcccaa ttttgtgtca taattctcta tgtactgcct taatattatt
     1921 tcctctatat aatactcatg aatgtacttg gtattggaaa gaactttttc tgattttgtt
     1981 gggttttttc cttctattct gcgaatatca aagtcaaata ttattttttt atttttcata
     2041 ttctaaaaat ctgatccatt ctggaaacca caagttactt tcaggaatgc caattccttt
     2101 agcgagtaac gaaggagaat tatagaatat tttttcacaa ccaatctccc tagaaacaaa
     2161 agaattgagc tgatctaaat tcgacatttt acctacatat ttgttggcaa gaaaatccct
     2221 attatgagta tacaaaccaa cttgtcttcc atcaatagtg ggaacataac atactatcac
     2281 attcacttgt tttactccat ttttcttgag atagtaaata gtttctctgg ccgtactacc
     2341 tgtttgtatg gttccttgaa ttgtagcaat ttttctattt ttagttaaat tttctattat
     2401 aaattttaac gactttcctg ttgttaaaag tttattttta cttacttgtt cagaaaaatc
     2461 tatcatatga tcagagtcat catacctgtc ttttattacc ccttcggata tttcaaattt
     2521 tgaaaatttg ttctgtaagc ttaatcccat tcccaatgcc ataggtctag tataatctgg
     2581 ttctgcataa atactatcta gatccatctc taggggcaaa cgatcagctt gtacttttcc
     2641 gatatttttt cttattgaat aaatactttt attgttaaac atggaactta catgagattc
     2701 tcgtataaat tcaaatggat ctagtaatat tttgtggtct ttaagtgtaa ctaaatcctg
     2761 aacatgattt tttagactta attttatcaa ttgtcctggt tttatattta cataatttaa
     2821 atgcggaaaa gatatcctta gtgaattctc agatgaaata actacgatgt gatcatctgt
     2881 ggccataata agaggtttaa atccagtact atttcgaaaa ataaatattt cattcttctt
     2941 tttaataata atatttcccc tgagatgtct atctataaac tcagctgcct gttcgctatt
     3001 ttttttttcg gtaattaatt tcataaaaat ataaaagatt tgatacaatg aatcgagttt
     3061 ttttgcagat ccgatgtgtg gatgaagata taacttttct gtatctacaa gaaaaccatc
     3121 aatagagata tcgagtaaat tcatactagg aaaaagaggc gatctttttg aaagatatcc
     3181 tactgcacat aatccagata actttttctt tttaatggaa gctaataaaa catcgtcaga
     3241 tggtatagaa cctcggtttt cgatgacatt gtcaccaatc atcaatttcc aataagcttt
     3301 tcctctatgt tgaagcatcc tcataccacg tataaggtaa aatatggtcg tatcagaaga
     3361 tttatttccg ttgtagttat aaactgcaat taatcctgcc aaagatctgt tttttgattg
     3421 ttagaaaaga tataaaagtt atcgagtcct aaaatggaac taatattcat aaaaataata
     3481 taacgaaact atcagcaatg ttacgaaata attataatag agaatttagc aaaataaaaa
     3541 aatggtttaa tgttatataa gtaaattaga atatgtttat tggaattatt gggaaagcga
     3601 atgttggcaa atcaactttt tttaatgctt taacagatca agcggttaca tcagcaaatt
     3661 atccttttac cacaatacaa ccaaatatag gaattagtta tgtgagaaaa aaatgtgttt
     3721 gtagagaatt tggtgttcaa gataatccga tccattcagt gtgtgttgat gggaatagat
     3781 ttattccagt gaaattaata gatgtagctg gtttagttcc aggagctcat ttaggaaaag
     3841 gacttggtaa taagtttcta gatgatgcaa gacaggccga tgcattagtt catgttgtag
     3901 atgcgtctgg atcgaccgac cccgagggac atataataga tcaatccaag ggagaccctc
     3961 tgtatgatat aaaatttgta gaagaagaat ttgatcgctg gctattttct atagtcagca
     4021 gagaatggaa taagatttca agagatatga ttagtcaaaa aatgaaaatt gaacagatac
     4081 taacaaaaaa attgtcaggt ttgtctataa atatggacaa tattgtagaa tccttaatgg
     4141 agttgaattt aaagaacaag aatcctgatt tgtggacaga ggatgaatta ctatcttttg
     4201 taagaatagt tagaatgaaa tctaaacctt tacttattgt tgcgaataaa atagacataa
     4261 aatcctctat gaaaaatata atgaagatta aaaaagaaat agacagaata ataattccat
     4321 gtgcttcaga agcagaatta gctttgagaa aaggaatgaa aaagggacta tggtattatt
     4381 taccaggcga taaagatttt cagataaaga aaaaagacct caatgaacaa caagaaaagg
     4441 cgatattgat gattaaatcg atattgatgg agaatggttc taccggagtc cagaatgcca
     4501 tcaatactat atgttttgat ctcatgaaat tgattattgt ttaccccgta gaagatgatg
     4561 ttaaattatc agacaaaaat ggaaacgtac ttccacatgc gttactaatg cctaaaggtg
     4621 ccactgcaaa ggatcttgct caagcgatac atgcggattt ggcaaaaggg tttatgtttg
     4681 caattgatgt tagaaataaa caaagaatag gagcagaata taaactgaat gataatgatg
     4741 taattaaaat agtatcgtct acgtcaaggg gataatgaaa atgattttta atgattcagg
     4801 tgaaaaacta ggttttggaa tagagagtac tgctcacact tttggttgtt cggtaataaa
     4861 atttaaggaa ccacaaaaaa aaggcgagat tctttctgaa gaaaggagta tatataaagc
     4921 accatccggc tcaggtattc atccaagaga agcctcaaga catcacatga acaaggcacc
     4981 agaaatcttg agaatttgtt tgaaagaagc aaaagttact cctaaagaac tagatatcat
     5041 ttcatattct gccggtccgg gattgggacc gtgcctaaga gtaggagcgg ttgtagcaag
     5101 aactctttca tcgttttata ataaaccatt aattccagtc aaccatgctt taggacatat
     5161 tgaattagga atgatgttaa ctgaatgcaa agatcctcta gtgttattgg tttctggagg
     5221 ccatacgatg attttagcat tctcaaataa gcgatggaga attttcggag aaacgctaga
     5281 tataacaata ggacaattat tagatcaatt tggcagacac atggggcttt cttcgccatg
     5341 tggaaacaaa atagaagaat tagcatcaca atcatcagaa gagtacattc aattaccgta
     5401 ttcagttaaa ggaaatgatg tctctttttc gggccttttg acttatacga aatcacttat
     5461 tactgagggt aaaaatgaat ttgatgtatg tttttccttg caagaaactg cctttgctat
     5521 gttaacagaa gtagttgaaa gagcattatc ttttacagga aaaaaacatg tattaatagt
     5581 aggaggtgtc tcagcaaata aacgtctaca tgatatgttg gaacagtcgt ctgaaaggca
     5641 gaaagcagaa ttacgatcat gtccgttaat ttactcaggt gataacggat cacaaattgc
     5701 atggataggt ttatgtgagt atcagactac aggaaaaata acagatatca aaaaatcttt
     5761 tgttaaccaa tcatggagat tggattcagt agatgttaat tggagaacct agaaatatac
     5821 acaataaact aaaaaaacag ttttatactt ttctaatata ggttattaga tttaactttt
     5881 tcaatctctt ttgtccattt agaattactg aaaactccga atttatatat ctcatttttt
     5941 aaggtggtaa ttactagctt ttttatgatg aatccttcag ccctacaatc agcaatttga
     6001 tcaagaggta aatctaaaag taattcgcca gtttgttttg aaagggttgc aagggtacct
     6061 tcagtttttt caaaaataat tcgctgattt gtaagtgtaa gtattccgtt ttttagcctg
     6121 tcttctgcac agtcttcttc aaggattaat ttctctcctt ttctaggttt tacagaactc
     6181 acgtttttat tatatagaat atgcatatat tatcattgca tcgaaaactc ataaagaaag
     6241 gagcagaagc cgatattttt ttaatagcat ggtacggaag aaaggcgatt tcaaaaatga
     6301 gaaatccaaa gcaatatagg aacaaatatc ttgacgaaaa tataaggaaa aaaagaacat
     6361 tacatgaagc caatatgtta agtgcagtta agaacgtgga tataaaaaca ccatctttgt
     6421 tatttttgga tccactaaaa gctgaaataa taatggaata catagatgga cataatgtca
     6481 aggatataat gtcaagtcaa ttggctttag atatgggaaa atatacgtcc ttattacata
     6541 ataataatat tgtacatggt gatttaacta cttcaaattt tataaaatct ggtaacgatc
     6601 ttgtaattat agattttgga ttatcttttt tttctgacag gattgaagat agagcggttg
     6661 actttcgatt aattaaagag attttgagta gtgcacatat agatatattc gatcaggcat
     6721 atcagaattt cataacagga tattcgaaca atacaaataa caatatgaaa aaaatattac
     6781 gagtagtcag tgaaatagag aaaagaggaa gatatgcaag aataagttag acaaaattgc
     6841 taaaattaaa attactagaa tatcagaaat caatagtatc atattaccta acataggttg
     6901 gtttacaatt tacttcatgc aatatgtatt atgttcttgg aattgttatt ttttatataa
     6961 caaagattta agaatttatg ttaatctgta tgtactatat acaatttgaa aatattttta
     7021 tttataatat ttatagatag aaatatgatt aatttactgt tttttgtaac tagtaattca
     7081 tataaatttt tggaggttga atcaatttta aaaaaaagat taaattctac aaagttacaa
     7141 ttttataagc atcatattat agaaatacaa tctgatgata tcgaaataat tgctttagaa
     7201 aaagctagat atgcttatga tatggttaaa cagccaataa taatagaaga tgatggattg
     7261 tttattaaat ctttaaacgg ctttcctggc caatattcgt catatagttt tgctacaata
     7321 ggaaatagag gaatcctgaa actaatgaag ggagaatctg atcgatctgc tttttttaga
     7381 tcgatttttg tttataatga tggaattgaa atagaacttt tttctgggca aatttgtgga
     7441 aaaatctcta cgcgacttta taaaggagga tggggatttg atcctatttt tattccagaa
     7501 aaatcaaata tgtcattggg cagattatac attataaaca aaaaaaacaa gttttcgcat
     7561 agaagattaa ctttagagaa attcatatca tggtataacg gaaaatatcc acaatagagt
     7621 atcaaatatt ttgaatttat cattttatta ttacattaaa atatttgctt acagaacaat
     7681 ttgactttaa actttattat cttgaattga cttcacaatg taatgtaaat ttataaagaa
     7741 attttttcaa gaaatcataa agtcatttgt ataatttatt tctattatgc aaaaagaata
     7801 atagttataa aagtaacttt atttttaata tttaatgaag atattgttct atttaatagt
     7861 atcacatctg ttatattaat tataaacttt ataggttaag gatgaaaaac cgcagccgat
     7921 acgaggttat tgcagctata atatcatcat gcataagaat ggaaactcga acaaaaatta
     7981 tgtacaaagc tatgcttagt aacgatcaat gtaagctata tattcaattt ttattaaaat
     8041 gtggtttaat taacgaggtt ttaaacggtg aaaaaaggta ttatattatt actgaaagcg
     8101 gaaataaatt tctggttaat tttgaaaaat tgaaagaaat gctcccaagc atcatggagg
     8161 gagagataga agaacatcat aatttaacga tctaacataa attttattat attttgaaat
     8221 ttattcatag aatgtcttcc acattttaaa aaaattaatt catatatttt aacagatatt
     8281 ttacaaaatc cagtttgaat attgtagttc tgtgataaca caattagcgt ctttcagata
     8341 ttcaaaagta gaatgataaa aacaaggaag tattttgtat tgtacttgtt ttgaccatct
     8401 ttcttctgca ataaataatt cttcttatcc taggaaaata ttgcattttt gagagaatgt
     8461 ttatatgtat caagaaactt tcccgtattc tttgagcaaa gtggtttgct ctatctagaa
     8521 aaggtacaaa ttacaaaatc tttctatgtg tactcatttt aggtagtcga caaaactctt
     8581 tgctgttaaa tttattatat tgtcgaaata actgtttcct atatattaat agactcctaa
     8641 aaacaattgt tcttttggga gatcctgtaa ctgctacaac agatctttgt ttctttcttc
     8701 taactaaata agagtataca aatatggatt cgtcctgtat aacgatatta atgcagtctg
     8761 attttaaact aaagatctaa attactcttt tttgaatttc ctcttgtcct ttactcagaa
     8821 cgctaaattc tatgactata gataatagca ggaccacatc ttaaaccaat ttggtcaaat
     8881 tgacagaact
//
LOCUS       DATIAS010000325         4577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_877085, whole genome shotgun sequence.
ACCESSION   DATIAS010000325 DATIAS010000000
VERSION     DATIAS010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4577
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877085"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..1474
                     /locus_tag="VLA74_06605"
     CDS             125..1474
                     /locus_tag="VLA74_06605"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HSF50413.1"
                     /translation="MGPVGLESSVRIPQTKTTTFKIQQEQYGYNKDTMRDLYHRKDRL
                     KYWMNRIHSDLEEPDRSDVLQLVENMQERERAILWIIRCITALLSMRKQLAKPFREVS
                     KSDIKDLLLWMDEKGYKASTHEKYRQLLKLFYKTIYGNNEYYPDCVKWFSVKVGNEKA
                     SKDPTMNMAEYLEEIEIQKLIEAAPTLQKKAFLACMYESGARPEEFLRLSNLDCKIDT
                     HGAILILRGKTGERRVRTISFAKTLQQWLEVHPLKNHQKQFPLWISDATNFKNQPLGL
                     RGAQKIIEEAMSKANLVNKHSRLYILRHSRASVLATYFTEAQLCTFFGWVQGSQVVKR
                     YIHMSGKDLDNTLISISEGKQAIKQDEYLLKTKKCNRCTETISPTQQFCGRCGLSITL
                     IDQYTKEMDIERENRELKQQIQIVKEEMNDKFNKIISMIQKNPLLANIKPDKLKNKL"
     gene            complement(1526..2647)
                     /locus_tag="VLA74_06610"
     CDS             complement(1526..2647)
                     /locus_tag="VLA74_06610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50414.1"
                     /translation="MQKIKYIYSAYAHMDTIGYIYHLYELQKKFSEPGEAPKQLLPLF
                     AINKYITTYQCFKELNKQKKISYKNVHKRVKKLLELGLIKEVTNNIPTKHGSIFYKLS
                     SFGIYYIFLAIRIDKIAIQKLFENYLNDDLFDKVLFQYIEKKTIKAIKSLVILDNIFN
                     FINGNLLNIDYVLKHFLPEVEKEGGYLTTIAPIDNLVHPDQDSYLYGGSKEFIDYLRK
                     KFNIKWLNKETSKINFDKKDNNIIEITDKKDKLIIKLDKEKKRAILYNKQNILFEFEL
                     EEILENSFAINEFRSRTLEEYITELDLFKYAIGRISNLCIQVLEYASAEDEFWKSEAI
                     EMAKSLKLLSKDKKFKNTLEQIKNKFDTNFDKFENLSLT"
     gene            2886..3083
                     /locus_tag="VLA74_06615"
     CDS             2886..3083
                     /locus_tag="VLA74_06615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50415.1"
                     /translation="MTSISIPNNIIKIQDNNLICEATGCYKPATNEIKLEVGQFGKIS
                     LILCKKCLPKFTTKGDNTENV"
     gene            3076..4530
                     /locus_tag="VLA74_06620"
     CDS             3076..4530
                     /locus_tag="VLA74_06620"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HSF50416.1"
                     /translation="MYNKSLDSQNIKKIEIKIKSEYEQLVPPLTPIGYTNLKESIKEN
                     NGNTIPIIVNKEGTVLDGNNRFKACLELGLKPRIEIQEFSDPILEKEFIITINLHRRQ
                     LTQFQISELGFKLEDIEKQKARNRQLKALKNVGDNNSYSISSLASNDANEETIGKVSK
                     IIANKIGQSSTRYERNKKIIEDGTEEQKNRLREGKESTNKIYNDIVKAKKKEELLKNA
                     KISAAPSTISAQENTYFNNYKLFLGDLIEKGQEISDESIDLIFTDPPYATEHIHIYSE
                     LAALANRVLKPGGSVVTYIGQHNLPEILEIFTSNNLKFWWPIAVKHTGPTTAFHQRKV
                     CVLWKPLLWFVKGDKLSEFSPITALNEYLYDYVESKPADKILHSWEQSPVEAEHVIKK
                     LTVENQIVLDPLMGVGTTGIAALNLKRKFIGIEIEQEKFKIAEAKLTSHILANDNKNN
                     DTSSTMDLDPTTNELGQENNNSISLSDKENNFDR"
BASE COUNT         1819 a          611 c          694 g         1453 t
ORIGIN      
        1 aaaagtctaa aaaattctat ttttatagat aagtgatatt tttataaaat taaaatttat
       61 taatttaaat ttaagacata ttttaataat ttaccaatgt atatattcaa aatatttata
      121 tactatgggg ccagtgggat tggaatcctc ggttcgtatc ccacaaacaa aaaccacaac
      181 atttaaaatt cagcaagagc aatatggcta caataaagac acaatgagag atctatatca
      241 ccgaaaagat agattaaagt attggatgaa tagaatccat tcagatctgg aagagccaga
      301 tagatcagat gttcttcaat tagtagagaa tatgcaggaa agagaaagag ctattctctg
      361 gataataaga tgcataactg cacttttatc aatgagaaaa caattagcta aaccatttag
      421 agaagtttca aaatctgaca tcaaggatct attattgtgg atggatgaaa aaggatacaa
      481 agcgtctact catgaaaaat atagacagct cttaaagcta ttttacaaaa caatttatgg
      541 aaataatgaa tactatccag attgtgtgaa atggttttca gttaaggttg gaaatgaaaa
      601 agctagtaaa gatccaacta tgaatatggc tgaatatcta gaagagatcg agatacaaaa
      661 attaattgaa gcagctccaa ctttacaaaa gaaagccttt ttggcttgta tgtatgaatc
      721 gggagctaga ccagaagaat ttcttagact ctcaaattta gattgcaaaa tagatactca
      781 tggagctata ttgattttaa gaggtaaaac tggtgaaaga agagtcagaa ctatttcatt
      841 tgccaaaacg ttgcaacaat ggttagaagt acatccttta aagaaccatc aaaaacaatt
      901 tcccctttgg attagcgatg caactaattt taagaatcaa ccattgggat taagaggtgc
      961 acaaaagatt attgaagaag ctatgtctaa ggcaaacctt gtaaataaac atagtcggct
     1021 ctacatttta agacattctc gtgcttcggt attagcaaca tattttaccg aagcacaact
     1081 ttgcacattc tttggatggg ttcagggaag tcaagtagta aaaagatata ttcatatgtc
     1141 tggaaaagat ttggataata ctctaatatc aattagtgaa ggaaaacaag ctattaaaca
     1201 agatgaatat ttattaaaga caaaaaaatg caatagatgt actgaaacaa taagccctac
     1261 acaacagttt tgtggacgtt gtggcctctc tattactttg atagatcaat acactaaaga
     1321 aatggatatt gaaagagaaa atagagaact aaaacaacag atacagatag tgaaagaaga
     1381 gatgaatgat aaatttaata aaataatttc aatgatacaa aagaatccat tattagcaaa
     1441 tataaaacca gataagttaa agaataaatt gtaaaataac taagaaacgc aataaaactc
     1501 attatttgtt aaagataaaa gataattaag ttaaggataa attctcaaac ttatcaaaat
     1561 tagtatcaaa tttatttttt atctgttcta aagtattttt aaatttttta tctttagata
     1621 ataattttaa acttttagcc atttctatag cttctgattt ccaaaattca tcttcagctg
     1681 aagcatattc taatacttgt atacaaaggt tcgaaatcct accaattgca tatttgaata
     1741 aatctaattc tgttatatat tcttcaagtg ttctagacct aaactcatta atagcaaatg
     1801 aattttctaa tatttcttct aactcgaatt caaataatat attttgttta ttataaagaa
     1861 tagctctttt tttttcttta tctagtttta ttattaattt atccttttta tctgtaattt
     1921 caattatatt attatccttt ttatcaaaat ttatttttga tgtttcttta ttaagccatt
     1981 ttatattaaa cttttttctt aaatagtcaa taaactcctt agatcctcca tacaaatagc
     2041 tatcctggtc tggatgaacc agattatcaa ttggagcaat ggttgttaaa tatcctcctt
     2101 ctttttctac ttctggtaaa aagtgtttta acacatagtc gatatttaat aagtttccat
     2161 taataaaatt aaaaatatta tctaaaataa ccagtgactt aattgccttg atagtttttt
     2221 tctctatgta ttggaataga accttgtcaa acagatcatc atttaaataa ttttcaaaca
     2281 atttttgaat agcaattttg tcaattctaa tagctagaaa tatgtagtaa attccaaatg
     2341 aagataattt ataaaaaata gatccatgtt tagttggaat attgtttgta acttctttta
     2401 ttaatccaag ttcaagaagt ttttttactc tcttatgaac atttttataa gatatttttt
     2461 tttgtttgtt taattcttta aagcattgat aagtagtaat atatttattt attgcaaata
     2521 aaggaagtaa ttgttttgga gcttctcctg gttcggaaaa ttttttttgt aattcgtata
     2581 aatggtatat ataccctata gtatccatat gggcatatgc ggaatatata tatttaatct
     2641 tttgcataat aacaaatatg caaagaaata tgatttctgt tggcatatct tttccaaaag
     2701 agttattgga aaagttagat agggaacggc aagacatctc tcgaagtaaa tatgtcctga
     2761 gaataattga gaggttgtac ataaaaaatg aggcaaaata agaaaaataa caaaatcagt
     2821 gattcacttg attctagaag ttcgaccgtc cagggtcaag tgaatcactc taggaaatta
     2881 tagacatgac aagcatatcc atacccaaca atattataaa aatacaagat aataatctta
     2941 tctgtgaagc tactggatgt tataaaccgg caacaaatga aattaagtta gaagtaggac
     3001 aattcggtaa aatttcttta attctatgta aaaagtgtct tccaaaattt actacaaaag
     3061 gagataatac agaaaatgta taataaatca ttagacagtc aaaacattaa aaaaatagag
     3121 attaaaatta aatcagaata tgaacaatta gttccaccat taactccaat aggatataca
     3181 aatctgaaag aatcaataaa ggagaataat ggtaatacta ttccaataat agtaaacaaa
     3241 gaaggaacag tcctagatgg aaataataga ttcaaggctt gtttagagct aggattaaag
     3301 ccacgaatag aaatacaaga attttctgat cctattttag aaaaggaatt tataattact
     3361 attaatcttc atcgtagaca attaactcaa tttcaaattt ctgaacttgg attcaaatta
     3421 gaagatatag aaaagcaaaa agctaggaat aggcaattaa aggctttaaa aaatgttgga
     3481 gataataata gctattcaat atcatcgtta gcatcaaatg atgctaacga ggagacaata
     3541 gggaaagtta gtaaaattat tgcaaataaa ataggtcaat catctactag atatgagcgt
     3601 aacaaaaaga taattgaaga tggaacagaa gaacagaaaa ataggcttag agaaggtaaa
     3661 gaatctacaa ataaaattta taatgatata gttaaagcta aaaagaaaga agaattatta
     3721 aagaatgcaa aaatatcagc agcaccatca accatatcag cacaagagaa tacttatttc
     3781 aataattaca aattattttt aggagattta atagaaaaag gacaagagat atccgatgag
     3841 agtattgacc tcattttcac tgatcctcca tatgcgactg aacatattca tatctattca
     3901 gaattagcag ctttagctaa tagagtacta aaacctggag gttctgtagt tacttacatt
     3961 ggacaacata atttgccaga gattctagag atttttacat cgaataacct aaagttttgg
     4021 tggcctatcg cagtaaaaca tactggacca acaacagcat ttcaccaaag aaaggtatgt
     4081 gttttgtgga agcccctatt atggtttgta aaaggagaca aattatcaga attttctcca
     4141 ataacagctt taaatgagta tctttacgat tatgtagaat ctaaaccagc tgataaaatt
     4201 ctccattctt gggaacaaag tccagtagaa gcagaacatg taatcaagaa gctaacagta
     4261 gagaatcaaa tagtgttaga tcctttaatg ggggtaggta ctacaggaat agctgcatta
     4321 aacctaaaaa gaaaatttat tggaatagag atcgaacaag aaaaattcaa aatagcagag
     4381 gcaaagttaa caagccatat tcttgctaat gataacaaaa acaatgatac atcatcaaca
     4441 atggatctag atcctactac taatgaactt ggacaagaaa acaataattc aatctcactt
     4501 tctgataagg agaacaattt tgataggtga tgatatttaa tatgttcatt tataataaag
     4561 atcccgatat tggttgt
//
LOCUS       DATIAS010000326         2800 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_58726, whole genome shotgun sequence.
ACCESSION   DATIAS010000326 DATIAS010000000
VERSION     DATIAS010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58726"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VLA74_06625"
     CDS             <1..209
                     /locus_tag="VLA74_06625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50417.1"
                     /translation="QPETAQETAPPAQPETAQETAPPAQPETAQETAPPAQPEGTERP
                     SEEPKENGGNFLDQIIGGITNLFK"
     gene            234..1829
                     /locus_tag="VLA74_06630"
     CDS             234..1829
                     /locus_tag="VLA74_06630"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SagB/ThcOx family dehydrogenase"
                     /protein_id="HSF50418.1"
                     /translation="MNQNIEIAKEFHEITKHSPLSIYSNRHYLDWENKPFPFKIYLNK
                     QKVNLPSTFPYPMEDSIVCLKKRIDSNLSKHSQIDPKILSQILFFSAGITRKVNFNNN
                     VYYMRAASATGALYPIEIYLICQNMKNIDAGVYHFCPADFTLTQLRKGDFRSILFTAT
                     GNNNKVIQAPITLIFTSIAWRNSWKYQTRSYRHWFWDAGVILANFLALCNNNILSSQI
                     ILGYHDEVINRLLGLQYQKETAIALATIESYYKYNDSKQFNFNQLSSLKCETKPISKY
                     EETIYPDIWKIHESSYLNSSREITNWTSMKNEWNLNSYNKKKIYHNVVDITSKYNLGD
                     LILQRGSTRRFSKKPITITQLQNILYLVSINIPFDFITDEQSLIDIYFIANSVNNLQS
                     GKYYYNKLENNIEELEEGDFRGVAGHLCLDQKLFSDASVVFFLLTNIDTILKYWGNRG
                     YRAVQLEGGICAGKIYLAAYSQGLGASGSTFYDDEVTESFLPHSNQKSTIISIGVGIP
                     AYTAKPGKIYTNVLDKKDYSNKI"
     gene            1971..2336
                     /locus_tag="VLA74_06635"
     CDS             1971..2336
                     /locus_tag="VLA74_06635"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50419.1"
                     /translation="MFKSKKYVRTITRIPDDLWNEINNILPDEKLENTIGRPIVPYRK
                     VFDGIMFILRTGSQWKMLPREYGSGSTCHRRFQEWRELGIFDRLWTRLLKIYYHKRGI
                     KWSWQSLDSISIKSSLGGP"
     gene            2333..2704
                     /locus_tag="VLA74_06640"
     CDS             2333..2704
                     /locus_tag="VLA74_06640"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50420.1"
                     /translation="MTGNNPTDRSKLGSKRHILTDKKGILLSAIITSANTHNDVTVAI
                     DTVDSIVIKRPSSSSKPKYKQKQNLCVDKAYHSKEIEQEIIKRGYIPHIRHRREEERI
                     FHRKHPARRWVVERKNKFMAQ"
BASE COUNT         1086 a          431 c          435 g          848 t
ORIGIN      
        1 ctcaacctga aactgctcaa gagacagcac ctcctgctca acctgaaact gctcaagaga
       61 cagcacctcc tgctcaacct gaaactgctc aagagacagc acctcctgct caacctgaag
      121 gtacagaaag accttctgaa gaacctaaag aaaatggtgg caatttccta gatcagataa
      181 ttggagggat aacaaatctc tttaaataat ttttataatt gtaatcaata tacttgaatc
      241 agaatataga aattgcaaaa gagtttcacg aaattacaaa acattcacct ttaagtatat
      301 attctaatcg tcattatctg gattgggaaa ataaaccctt tccatttaaa atatatttga
      361 ataaacaaaa agtgaattta ccatctactt ttccctatcc aatggaagat tctattgtat
      421 gtttgaaaaa aagaatagat tcaaatctat ccaaacatag ccagatagat ccaaaaattc
      481 tatctcaaat acttttcttt tctgctggaa ttacacgaaa agtgaatttt aataataatg
      541 tatattatat gagagcagca tccgctactg gtgctttata tccaattgaa atttatttaa
      601 tttgtcaaaa tatgaaaaac atcgatgcag gtgtctatca tttttgtcca gcagatttta
      661 ctctaacaca gttaagaaaa ggagatttta gatcaatact atttacagct acaggaaata
      721 ataataaagt tattcaagct ccaattacat taatttttac ttcaatagca tggagaaatt
      781 catggaaata tcaaacacgt tcatatcgac attggttttg ggatgcaggt gtgatcctag
      841 ccaactttct agctttatgt aacaataata ttttatcttc acaaattatt ctaggatatc
      901 atgatgaagt cattaataga ttacttggat tacagtatca aaaagaaact gctattgcct
      961 tagctacaat tgaaagttat tacaagtata atgattctaa gcaatttaat ttcaatcaac
     1021 tttcatctct gaaatgtgaa accaaaccaa tttcaaaata tgaagaaact atttatcctg
     1081 acatatggaa aattcatgaa tcttcttatc ttaatagctc aagagaaata acaaattgga
     1141 cttcaatgaa aaatgaatgg aatctaaatt catacaataa aaaaaagatt tatcataatg
     1201 ttgtagatat cactagtaaa tataatctcg gagatctaat tttacaacgt ggatcaacaa
     1261 gaagattttc aaaaaaacct ataaccataa cacaactaca aaatatccta tatcttgtta
     1321 gtataaacat accttttgat tttattaccg atgaacaaag ccttattgac atatatttta
     1381 tagcaaattc tgtcaataat ttacagtctg gtaaatatta ctacaataaa ttagaaaata
     1441 atatagaaga acttgaagaa ggagatttca gaggtgtagc tggacatttg tgtttagatc
     1501 aaaagttatt tagtgatgca agtgtagtat tctttctttt aacaaatata gatacaatat
     1561 taaaatactg ggggaatcgt ggttatagag ctgtccagct agaaggagga atatgtgctg
     1621 gaaaaatata tcttgctgca tattctcaag gactaggtgc ttctggttca acattttatg
     1681 atgatgaagt aacagaatct tttctccctc attcaaatca aaaaagtaca ataatatcta
     1741 taggagtagg cattcctgct tacacagcta aacctggaaa gatatatact aatgttttag
     1801 ataagaaaga ctattctaat aaaatttaat tcttaactac aataatatca aagaatttgc
     1861 tgagaaaata tagaattcct atacttagta ttacaaataa taatagaatt aagaacctat
     1921 cccaaaaata gataggaata tagctcgttt gtttctcatc ctatctgata atgtttaaga
     1981 gtaaaaagta tgttagaaca attacacgca ttccagatga cctatggaat gaaattaaca
     2041 atattttgcc agacgaaaag ctagaaaaca ctataggtcg tccaattgtt ccatatagaa
     2101 aagtgtttga tggtataatg tttatcctga ggactggatc tcagtggaaa atgttaccaa
     2161 gagaatatgg ttctggttct acatgccata gaagatttca ggaatggaga gaattaggta
     2221 ttttcgatag actatggacc agattgttaa aaatatacta tcataaaaga ggaattaaat
     2281 ggtcatggca atctcttgac agcatatcta taaaatcatc tttaggaggg ccttgactgg
     2341 aaataatcct actgacagga gtaagttagg aagcaaaaga catattctta cagataaaaa
     2401 aggtattcta ctatctgcta ttataacatc tgcaaatact cataatgatg tcactgttgc
     2461 aattgataca gttgacagca ttgtaatcaa aagaccatca tcatcatcca aaccaaagta
     2521 taaacagaaa cagaacctgt gcgttgataa agcatatcat tccaaagaaa tagaacaaga
     2581 aattatcaaa agaggatata ttccacatat acgacacaga agagaagaag aaagaatatt
     2641 tcatagaaaa catcctgcta gaaggtgggt tgtagagaga aagaacaaat tcatggcaca
     2701 ataatagatt caggaagtta tttacaagat atgagaagaa ggatgagaac tatctgggtc
     2761 ttgtaaaatt agccaacagc attattatct acaggaggat
//
LOCUS       DATIAS010000327         3160 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1831282, whole genome shotgun sequence.
ACCESSION   DATIAS010000327 DATIAS010000000
VERSION     DATIAS010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3160
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831282"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VLA74_06645"
     CDS             complement(<1..363)
                     /locus_tag="VLA74_06645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50421.1"
                     /translation="MIQQSLDDLVNKLVTGVKLENIITIPNEVHVGDTFEVNATVINT
                     LPLNITFIAGNCNSDFSTNLNIIVEEIMVPQCMNRVLPTVLEPGDKTTVQERSGTGKQ
                     YKAVAEGEANGNAILLYSI"
     gene            complement(341..484)
                     /locus_tag="VLA74_06650"
     CDS             complement(341..484)
                     /locus_tag="VLA74_06650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50422.1"
                     /translation="MKSYNVGRFGTFTIILLSMMVVVSSIALSIPQNIYAQSTNNDST
                     ISR"
     gene            1255..2220
                     /locus_tag="VLA74_06655"
     CDS             1255..2220
                     /locus_tag="VLA74_06655"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF50423.1"
                     /translation="MIIPTTAIIMTTTTTNPVYGQPDQTSFNVTDSSNIQNILAKKVQ
                     VGDIEIGYKMLGKGDPILFISGASSDMNDWDASSLGNLSSNHTVIVFDNRGVGNTTIG
                     SKTYTVQQLANDTAGLLDALNIQRADVLGLSLGSYVAQQLTIMYPDKVNSLVLVGSSC
                     GGKDQTPKPPELLKLQSEITNKSLNNIPISQEEMKSLLSFSLGSGWIKLHPESLENIP
                     DLFSSVPPNTIEQQKNIGLYWEENPNWSGACDELAKIAKPTLVITGTDDNAYQPHVNS
                     LKIVEKIPGAWLVQIKDAGHAVMGQYPDKVNRVLNTFLSTTAQSN"
     gene            2769..3032
                     /locus_tag="VLA74_06660"
     CDS             2769..3032
                     /locus_tag="VLA74_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50424.1"
                     /translation="MKYRSRTEIVGNILDAANGRATKTKIMYKAFLSYAQLKEYLSIL
                     TENNLIEYLDGTQTFKTTEKGLNYLKMHNEIEELLQTTTVKND"
BASE COUNT         1154 a          484 c          472 g         1050 t
ORIGIN      
        1 tatactatat aacaaaatgg catttccgtt tgcttcacct tctgctactg ctttatattg
       61 cttccctgtt ccactacgtt cctgaactgt ggttttatct cctggttcaa gtactgttgg
      121 taaaactcta ttcatacatt gcggaaccat tatttcttct acaataatat ttaagtttgt
      181 agaaaagtca gaattgcaat tacctgcaat aaatgtaata tttaatggta atgtatttat
      241 cacagtagca tttacctcga acgtatcacc tacgtgaact tcattaggaa tcgtaattat
      301 attttcaagt ttaacaccag taactaattt attcactaaa tcatctagag attgttgaat
      361 cattatttgt tgactgtgca taaatatttt gaggtatcga taatgctata gatgatacta
      421 ctaccatcat tgataatagt ataattgtaa atgttccaaa tcttccaaca ttataagatt
      481 tcattagcca aaatatgttg aaactaatat ataacccttt taaagataca ccataagact
      541 atatacttta aattttcctt tagatatgag aaacatttaa ttttcaacaa tatgtcagca
      601 taaaaacaat ccagatacaa aaagatgtcg ttcctgtatg agagtaacaa catgatggtg
      661 atgaaaatgg ttaatagtaa gagctaaaaa cgtaacaaac atggaacttt tttacatata
      721 gtaagaatag aagaagataa aaaaatacta gcaagagcta aatcagatga tagtctagag
      781 ctggaaattt ctcatggatt tgaatcctat tactatttac taataagata tatgatttat
      841 ttgaatatga gttgaagaaa tgtgttgttg cagaaaaaac taacagagat aggtcatcct
      901 aatcacatat ccaaaccttg gacacaatct ttattcctca acatagtaaa aactcaaaat
      961 gttcaataaa gcaatatgtc tgagtaatct ttattcattg cttaaatgaa tttcttggtt
     1021 tgcatctttt tctgttaaat agttgtctta taaagatctc ttgtatcatc ctatcttttg
     1081 atatattata gttaatttaa tcagaaattc caagatataa cgttaatagt aagtgaatag
     1141 agatataacg ttaatagtaa gtgaatagta tacaaaatag cttagaaaat gtattaacta
     1201 ccaaaaatta aaggaagtat aacttcagtt ttcatcatta tattcatgtt tataatgatt
     1261 atccctacta ctgctataat aatgactact actactacaa atcctgttta tggtcagcca
     1321 gatcagacaa gtttcaatgt aacagattca tcaaacatac aaaatatttt agcaaaaaaa
     1381 gtccaggtcg gcgatattga aattggatat aaaatgttag gtaagggcga ccctattttg
     1441 tttattagcg gtgcttctag cgatatgaat gattgggatg catcttcttt aggaaatcta
     1501 tcatcaaatc atacagtaat tgtatttgac aatcgtggag ttggaaatac aacaattggt
     1561 tccaaaacat acactgttca gcaacttgca aacgatactg ctggtttact tgatgctctg
     1621 aatatacaaa gagcagatgt tcttggatta tcccttggat cctatgtagc ccaacagctt
     1681 acaatcatgt atccagataa ggttaacagt cttgtacttg ttggttcatc atgtggcgga
     1741 aaagatcaaa cacctaaacc acctgagctt ctaaaattgc aatccgaaat tacgaataaa
     1801 tctctaaata atattcctat ttctcaggag gaaatgaaat ctcttttatc tttctcttta
     1861 ggatcaggat ggatcaaatt acatcctgaa tcccttgaga acattccaga cctgtttagt
     1921 agtgttccac ctaacactat agagcagcag aagaatatag gattgtattg ggaagaaaat
     1981 ccaaactgga gtggtgcttg tgacgagctt gcgaaaatag ccaaacctac tttggtcata
     2041 actggaaccg atgataatgc ttaccagccg catgttaatt ctttaaagat tgtagaaaaa
     2101 attccaggcg cctggcttgt acagatcaaa gatgctggtc atgcagtaat ggggcaatat
     2161 cctgataaag tcaatagagt attaaataca tttctttcga ctacagccca atccaactaa
     2221 tgtatttgtt atgatctatt agtagtagga taagttgtta gttgtattct tggagtcaat
     2281 aagtaaatta gattcaataa taaaagaact cctaagtata cctatcgggt tcgaatccca
     2341 tccttcccta ttgctcataa taaaatgtat cttattgata tgcataagtt tggtaagatc
     2401 atcatggtta gttacaagac gattagttag ttttagattc ttaattaaat taagttacta
     2461 aaaagctaaa tacaagttat attatctcta cgatagactc ttttgaaccg ctatcggtgt
     2521 tactccggac gtttgaatgt ataagaataa tcttattaaa atatagaaaa ttttattgcc
     2581 cataaaatag tatttttagt aaacagtata ctattactaa tcctgagaat gggtattact
     2641 caccttgtat tatcatttag ataatgtgga actaattcca aaaggaactt tccgaatgtt
     2701 tgtactataa ttatcttacc tttgactgtg atattaaact aaaataatta aatcacttat
     2761 ataaaaatat gaaatataga agtagaacgg aaatagtggg taatatactg gacgctgcaa
     2821 atggaagagc aaccaagaca aaaattatgt acaaagcttt tctaagttat gcacaattaa
     2881 aggaatacct ttctattttg acagaaaaca atctaataga atatcttgat gggactcaaa
     2941 cattcaagac tacagaaaaa ggattaaact atcttaaaat gcataatgaa atagaagaat
     3001 tattacaaac tactacagtc aaaaatgact aattaattta atattttttg atatactaaa
     3061 acataaaata ataattttta aactccatta aatttatttt aaaattaagt tctaataata
     3121 aaagctaaat actagatagt agtatatcta caatagactc
//
LOCUS       DATIAS010000328         2483 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1558136, whole genome shotgun sequence.
ACCESSION   DATIAS010000328 DATIAS010000000
VERSION     DATIAS010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558136"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VLA74_06665"
     CDS             <1..269
                     /locus_tag="VLA74_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50425.1"
                     /translation="VKSQRFIFLYSDVTRFQIKMKNRHLVNNTTNAEQHSVFVRDKYL
                     LSFISIVIELSKIKLAKNKKYTCKSSAPLNYNLKSTMLKWEMRV"
     gene            271..705
                     /locus_tag="VLA74_06670"
     CDS             271..705
                     /locus_tag="VLA74_06670"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF50426.1"
                     /translation="MKAYDVMSVDIICAKVNVTVMEIATRIVLGVVNGMPIINNDGKV
                     IGIITTIDLLRAIKSGKDLKITTANEIMTVNPLVINQDTEVDKIIDIMDKNNISMLPV
                     IENDGRIVGICSRSDIIKEILNERFVTIGRKRTVTTTIGEGL"
     gene            713..1024
                     /locus_tag="VLA74_06675"
     CDS             713..1024
                     /locus_tag="VLA74_06675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50427.1"
                     /translation="MKIMKNIIKTNLEDSYKDIRGMEDKLLRELCSRDYHSKKTGNIP
                     IFDIDEIYKKSFKGVQRESFNKFLEWLEKESGYIQFHIENKISLTFLGRNACMISRIY
                     G"
     gene            complement(1250..>2483)
                     /locus_tag="VLA74_06680"
     CDS             complement(1250..>2483)
                     /locus_tag="VLA74_06680"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSF50428.1"
                     /translation="YRSLLVAFMEVESDSSKINYNYKFIIQNEAILLGIVALYDSVRP
                     GVLNAIDFIKKSKIRIMMITGDHPLTAKAIAKELGIWNNDNDVPDEFMMITGKELEKL
                     SVDKLAEKVERIRVFARTTPEYKLKIVEALQRRGHIVAMTGDGINDSPALKQADIGVA
                     MGEKGTDVAKESAGLILLDDNFNTITHAIELGRLILFNIRKFAMFLLSCNLSEIMIML
                     LAIALSLPFPLLPLQLLLMNMVTDTFPALALAAEEANRDELMLRLPSKNEPVISRKEW
                     YSIFIQSLFMTIGTIGIFLWALNTDEERIVAQTLVFATLGMTQIWHVLNYSSLLRRFV
                     DNNHRINKYLIGAILLSLGILFIAVDVEPINDIFGLHRLNWSEWLTSLFVASLSVFGA
                     SLTIRIFNSKIPFLKSQR"
BASE COUNT          850 a          386 c          393 g          854 t
ORIGIN      
        1 aagttaaatc gcaaagattt atttttttat actcggacgt tactagattt caaattaaaa
       61 tgaaaaatag acatttggtt aataacacaa ctaatgcaga gcaacacagt gtattcgtta
      121 gggacaaata tttactatca ttcataagca ttgtgataga attatcaaaa ataaaattgg
      181 caaaaaacaa aaaatatacg tgcaaatcat ccgcaccgtt aaattacaat ctaaaatcaa
      241 caatgttaaa gtgggagatg agagtttagg atgaaggcct atgatgttat gtcggtggat
      301 ataatttgtg cgaaggtaaa tgtaactgtt atggagatag ctacaagaat agtattaggc
      361 gtagttaacg gaatgcctat tatcaacaat gatggaaagg tgattggaat tataaccact
      421 atcgatttgc tacgtgcaat taaatctggt aaggatctaa aaattactac agcaaacgaa
      481 ataatgacag ttaatccctt agtaataaac caagacacag aagttgataa aataattgat
      541 ataatggata agaataacat ttccatgctt ccagttatag aaaatgacgg aagaattgtt
      601 ggaatctgtt ctagatctga tataataaaa gaaatcttga atgaaagatt tgtaacgata
      661 ggtagaaaaa gaactgttac tactactata ggtgaaggac tgtagatgaa aggtgaaaat
      721 aatgaaaaat attattaaaa ctaatctcga agattcttac aaggatatta gagggatgga
      781 agataaactt ttgcgagaac tttgttctcg agattatcat tctaaaaaga caggcaatat
      841 tccgatcttc gatattgatg agatttataa aaaatccttt aaaggtgtcc aaagagaatc
      901 ttttaataaa tttcttgagt ggttagagaa ggaatcaggg tacattcaat ttcatattga
      961 aaataagatt tcacttacct ttctaggaag aaatgcttgt atgatctcaa ggatttatgg
     1021 atagactttc ttatacttca aatattttat tttttttttg agagttttgt tattaatcga
     1081 atagaaaatt aggccattaa attaattcat aaacatagaa ttgtgttcag ttaagtacct
     1141 gtgatttgtt actttttata atttatcacc tgctatattt tacatctctt ttttattata
     1201 tttgtctacg aattcttaaa tttcgcttaa tctgttttat cccacttgtt tatctttggc
     1261 ttttcaagaa aggtatttta ctattaaata tacgaatagt taaactagca ccaaaaacag
     1321 aaagtgacgc aacaaataat gaagttagcc actcactcca atttaacctg tgtaatccaa
     1381 agatgtcatt gatgggttct acatcaactg caatgaataa tatacctaaa gagagtaaaa
     1441 tagcacctat tagatattta tttattctat gattattatc aacaaatctc cgaagtaacg
     1501 atgaataatt taatacatgc cagatctgtg tcattccaag ggttgcaaaa actagagttt
     1561 gtgcaacaat cctttcttca tctgtattta gtgcccagag aaaaattcca atagtgccta
     1621 tggtcataaa tagagattga ataaatatgg aataccactc ttttcttgaa attaccggtt
     1681 catttttgga tggaagacgc aacatcaatt catctctgtt tgcctcttct gcagcgaggg
     1741 ctaatgctgg aaatgtatct gttaccatat tcattaatag taattgaaga ggaagtaagg
     1801 ggaatggtag agatagtgct atcgccagta acattatcat tatctcactt aaattacacg
     1861 ataatagaaa cattgcaaat tttcttatat tgaataaaat taatcgacct aattcgattg
     1921 catgggttat ggtattgaaa ttatcatcta acaatatcaa ccccgcagac tctttcgcaa
     1981 catcagtacc tttttctccc attgctactc caatgtctgc ttgttttaaa gctggggaat
     2041 catttattcc gtccccagtc attgctacta tgtgtcccct tctttgtagt gcttcaacta
     2101 tctttaattt atattctgga gtagttctgg cgaaaactct tattctttca actttttctg
     2161 ccaatttatc aacggataac ttttctaatt cttttcctgt tatcatcata aattcgtctg
     2221 gaacatcgtt atcattattc catattccca gttcctttgc tattgctttt gccgtcaaag
     2281 ggtgatctcc tgttatcatc attattctga ttttagattt tttaatgaaa tctatagcat
     2341 tcaaaactcc tggtcttaca gaatcatata atgccactat tcctaatagg atcgcttcat
     2401 tctgtataat gaatttgtaa ttgtaattaa ttttactact atccgattcg acctccatga
     2461 aggctactaa taagcttcta tat
//
LOCUS       DATIAS010000329         3414 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1014245, whole genome shotgun sequence.
ACCESSION   DATIAS010000329 DATIAS010000000
VERSION     DATIAS010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014245"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..536)
                     /locus_tag="VLA74_06685"
     CDS             complement(<1..536)
                     /locus_tag="VLA74_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSF50429.1"
                     /translation="MAYVDTSIIEQIEIKMIRHSSFAVRDKFQRYSEDDESLVTSIRE
                     HGLIQPILIRPLSNGFEIVAGHRRYQACKSLRWRFIPCKIREMTDKQAFEIQLSENIQ
                     RKSMDPIEEAEAFRRYVMDFGWGGVSDLAKKIGKSEEYVSHRIQLLKLPEEIKKKIAS
                     HILNVSKAIEISAIPIEK"
     gene            complement(775..1665)
                     /locus_tag="VLA74_06690"
     CDS             complement(775..1665)
                     /locus_tag="VLA74_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HSF50430.1"
                     /translation="MDFIFQPFQYEFFNRAIFVSILVGGTCGLLGVYIVLRGMSYIGH
                     GMSHAVFGGAVSSYIIGLNFYIGAAIWGILSALLITQINKRYKIKADAAIGVVTTAGF
                     AIGIFLMSTGQTPIRNFESLLFGNILSVNDLDFIFIIFVSIVTITFIFFFQKRLLFTI
                     FDTDTAKVYGVKTDRIDLLFSIVLAIVVIAAMNSIGVTLLAVAIIAPAISARLITNNF
                     FKMLILSSIIGIITAFLGMYCSFYVDSPSGATIVLFGTASFIIAIIYSHIKKSYHMHF
                     HGDKKHSHPHSHAEEHRHEH"
     gene            complement(1695..2432)
                     /locus_tag="VLA74_06695"
     CDS             complement(1695..2432)
                     /locus_tag="VLA74_06695"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HSF50431.1"
                     /translation="MNEINVAENILSLKNVSFGYTYHLPIIDGITLDIPKGSFMGLLG
                     PSGSGKSTLLKLIVGLYKPWDGKIKFHSYSNKKNKHSNIIGYSPQVESIEWDFPVTVR
                     EFVSMGIWNQSGFFPWLNKTSKIEIDNLLHELGIGDYPNRQIKELSGGEQKRVFLARA
                     LIHNPEILVLDEPTSGLDKTNKENFLQILRDLNWKGMTIIITTHDIDGVAKKLPWIVC
                     LNKSIISQGKPDSTLSDNILYRTYDLK"
     gene            complement(2516..>3414)
                     /locus_tag="VLA74_06700"
     CDS             complement(2516..>3414)
                     /locus_tag="VLA74_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HSF50432.1"
                     /translation="EENKLNVVTSVSPITNIVQNIGGGKINLIGLVPEGVNSHTFELI
                     PSDLIKINSADLIIIDGLNLEANIEKIAENAIAKNSNIQLLKLGENTISKEEWIFDFS
                     FPKENGDPNPHLWLNVEYAMKFANLTRDKLIEMDPSNSQYYIENSKKYSNLLKQLDYA
                     IKKSIETIPIENRKLLTYHDSWAYFAARYGMKVIGAIQPSDFGEPSPKDVAELIDQIR
                     IERVPAIFASEVFPTNIIEQIAKEANVTVVETLSDDDLPGNLGNFNHSYVGMMLENMK
                     NMIVPLGGNIDVLKDINPRNIP"
BASE COUNT         1162 a          562 c          436 g         1254 t
ORIGIN      
        1 tgcttttcaa ttggaatagc tgaaatttca atagctttac taacatttaa tatatgtgaa
       61 gcaatttttt tctttatttc ttcaggaagc ttaagaagtt ggattctgtg agacacatat
      121 tcttcactct ttccaatttt cttggcaaga tcactaacac caccccaacc aaaatccata
      181 acatatcttc taaatgcttc tgcttcttca atcggatcca tcgatttcct ttgaatattt
      241 tcagaaagct gaatttcaaa tgcttgttta tctgtcattt cacgaatttt acatggaata
      301 aatctccatc tcaaagattt acatgcctga tatcttcggt gacctgccac tatttcaaat
      361 ccattagata atggtctaat tagaataggt tgaattaaac cgtgttctcg aatactagta
      421 accagagatt catcatcttc agaatatctt tgaaatttgt ctcgtacggc aaatgatgaa
      481 tgacgaatca ttttaatttc tatttgttct attatacttg tatcgacata tgccacatta
      541 gtttatagag ctgtatattt atattatttt tcattcagcc tatttattat attaagaaaa
      601 cttcattaat atgaaaaata tatatctatt ttattaattt ataaattatt ttcaaaaatt
      661 aggtctaaaa tattaattaa actaatccaa aaatattata ataaatttat aaaaaattag
      721 aataatacca ttaaaatgac taaattgtct cactatgcta tatagttttc atacctaatg
      781 ctcatgtcta tgttcttcag catgactatg tggatgtgaa tgctttttat ctccatggaa
      841 atgcatatga tatgactttt taatatggga ataaataatg gcaataatga aggaagcagt
      901 accaaataat actatagtag ctcccgacgg tgaatcgaca taaaaactgc agtacattcc
      961 taaaaaggca gttattatac caataataga tgataggatt aacattttaa aaaaattgtt
     1021 tgtaattagt cttgccgata ttgcaggtgc aataatagct actgcaagaa gtgtaactcc
     1081 tatggaattc attgcagcta ttactacaat agcaagcact attgaaaata acaaatcaat
     1141 cctatcagtc tttactccat aaacttttgc tgtatctgta tcaaatattg taaataataa
     1201 tctcttttga aaaaagaaaa taaaagttat agtaacaatt gatacaaaga taataaaaat
     1261 aaaatctaaa tcattaacag ataagatatt tccaaataat aatgactcaa agtttcttat
     1321 aggtgtttga ccagtactca ttaaaaaaat tccaattgca aatcctgcag ttgttacaac
     1381 gccaatggct gcatcagctt ttattttgta tcttttattt atttgtgtta ttaataatgc
     1441 tgataaaatt ccccagattg ctgctcctat gtaaaaattt aatcctataa tatagctact
     1501 tactgctcca ccaaatactg catgagacat tccatgtcct atatagctca ttcctcgtaa
     1561 tactatatat acaccaagca atccacaagt tcctcctacc aatatcgaaa caaaaatagc
     1621 tcggttaaaa aattcatatt gaaatggttg aaatataaag tccataaata gtaacaaatc
     1681 ctatttctga gttttcattt taaatcatat gttctataaa gaatattatc agataaagtt
     1741 gaatctggtt ttccttgtga aatgatggat ttatttaaac aaactatcca tggtaatttt
     1801 ttagccactc catcaatatc atgagttgta ataattatag tcattccttt ccaatttaaa
     1861 tctcttaata tttgcaaaaa attctcttta ttggttttat caagaccaga tgtcggttcg
     1921 tctaaaacaa gtatttcagg attatggatc aatgctcttg ccaagaatac tcttttttgt
     1981 tctccaccag atagttcttt gatttgtcga tttggataat ctcctatacc taattcatga
     2041 agtaaattat caatttcaat tttagaagtt ttatttaacc atggaaaaaa accagattga
     2101 ttccaaattc ccattgaaac aaattctctt acagtaacag gaaaatccca ttctatactt
     2161 tcaacttgag gagaatatcc tattatgtta gaatgtttat tttttttgtt actataacta
     2221 tgaaatttta tttttccatc ccatggttta tagagaccta caattaattt taatagagta
     2281 gatttaccag aaccacttgg acctaataaa cccatgaaac taccttttgg tatatctaat
     2341 gttatcccat caataatagg taaatgataa gtgtaaccaa atgacacatt tttcaaactt
     2401 aaaatatttt ccgcgacgtt tatttcattc atttactgtt tatcttttgt tattaattga
     2461 agataatagt ctttattctc tattatttga taaataaaaa gagaataaat ctatattaag
     2521 gtatatttcg aggattaata tctttcaata catcaatatt gccgcccaac ggtactatca
     2581 tatttttcat attttctaac atcattccta catatgagtg attaaaatta ccaagattgc
     2641 caggtaaatc atcatcgctt aaagtttcaa caacagtcac atttgcttct tttgctatct
     2701 gttcaataat attggtagga aatacctcag aagcaaatat tgctggtact ctctcgatgc
     2761 gaatctgatc tatcaactct gcaacatctt ttggacttgg ttcaccaaaa tctgatggtt
     2821 ggatagctcc tattactttc ataccataac gagcagcaaa ataagcccaa gagtcatgat
     2881 aagtgagcaa ttttctattt tctattggaa ttgtctctat ggattttttt attgcataat
     2941 ctaattgttt aagtaaattg ctatattttt ttgaattttc aatatagtat tgtgaattag
     3001 aaggatccat ttctattaac ttgtcacgtg tcaaatttgc aaatttcatt gcatattcga
     3061 catttagcca aagatgagga tttggatcac cattttcttt tggaaagcta aagtcaaata
     3121 tccattcctc ttttgatata gtattttccc caagttttaa aagttgaata tttgaatttt
     3181 tagcaattgc attttccgca atcttttcaa tattcgcttc caagttgaga ccatcaataa
     3241 tgatgagatc tgcactattg atttttatga gatcagaagg aataagctca aaagtatgcg
     3301 aatttactcc ttcaggaact agtccgatca aattaatttt cccaccgcca atattttgaa
     3361 ctatatttgt tatgggagag actgaagtga ctacatttag tttattttct tcaa
//
LOCUS       DATIAS010000330         4733 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1694757, whole genome shotgun sequence.
ACCESSION   DATIAS010000330 DATIAS010000000
VERSION     DATIAS010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4733
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694757"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1247
                     /locus_tag="VLA74_06705"
     CDS             <1..1247
                     /locus_tag="VLA74_06705"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSF50433.1"
                     /translation="TFIDNGKIVEKPNGTQFSNEFYTDKMIDFIKKSKENNKPFFGYL
                     AFQVAHTPFQAPQEYIKKYEGVYDGGWDKIREQRFEKQKELGIWPTDMTLPKSYPTFP
                     DWNALPMDEQKQRSQIFAAHAGMIEDMDYNIGRVIQFLKDTGQYENTFIMFTSDNGGS
                     EPSDSPVVVGTLEGANDKELEEFKAGGFSETFDAIGGKDSYWGYGWQGAVMSNTPYSG
                     VKSTMFNGGIKPPFVIKEPHATNTPELDIVKEFVHVSDMTPTFLDYANTIHPGSEYKG
                     KQVSPMMGKSIKPLLEGMVEQVHMDDETISSEMFGNRAVFMGDWKARNNIFPIGDGEW
                     KLFNIKQDIREATDLSKEHPDILEKMVSAYDNYAKEVGIIPPKYSEQQKQGVMEMLAA
                     TNQTEFTGFPMEKLLAGYPAEP"
     gene            1483..2577
                     /locus_tag="VLA74_06710"
     CDS             1483..2577
                     /locus_tag="VLA74_06710"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSF50434.1"
                     /translation="MFNYKQSIILLAIILCVITISFSATLVTKNNDFFVLAKTSNISN
                     SSLSTFQDNKSNMWLDSWNAGVVKEKIIDFVKNVTDPTSPDYILPEDRIAVFDNDGTM
                     WSEKPIPFQGFFILDRIEELSRSYPDIRQDKVISQLLQKNLTNLQLGEKDVLSLALIT
                     HSNITQTNFNDIVEQWIKTAKHPQKQVRFVELVYEPMIELVNFLQDKQFNTFIVSGGG
                     VDFMRKALSQVYNIPYEQIIGSSVKYRYIDNAGSGNSTIFREPELNSFDNNEAKPENI
                     QLHIGKVPVIAVGNSDGDLEMLTYTDDNNKDSKSFEIIIHHDDAIREYAYDSGAERIL
                     KKAEKRGWNVVSMENDFLNIFPMKNITDIN"
     gene            3006..3449
                     /locus_tag="VLA74_06715"
     CDS             3006..3449
                     /locus_tag="VLA74_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50435.1"
                     /translation="MVDLGVKLVYETNEFWNTLYKTLGGLKFNLRIYGKDGDDEIQAQ
                     GGNDLVYACDDDDTIQGGEGSDIIFGQDGDDFIYGDSGSNFIYGGGGNSLYGGDGNDH
                     LFGGSGNDILKGSSGMDFFECNEGIDTVLDFNSKEDTMNLNCENI"
     gene            3712..3942
                     /locus_tag="VLA74_06720"
     CDS             3712..3942
                     /locus_tag="VLA74_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50436.1"
                     /translation="MDIVIYFGLFIIVGERQERMDLWKCIAIRGRKIQKIEESILMNV
                     EKNLTLLRTLNLIDKKFSKNINNFNMYSYQGK"
     gene            3978..4385
                     /locus_tag="VLA74_06725"
     CDS             3978..4385
                     /locus_tag="VLA74_06725"
                     /inference="COORDINATES: protein motif:HMM:NF017709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease inhibitor I9 family protein"
                     /protein_id="HSF50437.1"
                     /translation="MIGICGIFLAFPLFENIYTKDDSENSAIQEDIDKDKSENNNIIP
                     NQYIIYLNDNKQGSNTIDPLEFFNSELKDTGTELLHVYDNVAKGFAIKVPNEKVLEKL
                     KDNPSVKYIGQDKRTEAFTDSDSDNPKISIKVN"
BASE COUNT         1769 a          639 c          836 g         1489 t
ORIGIN      
        1 ctactttcat agataatggc aaaatagttg aaaaaccaaa tggtactcag ttttcaaatg
       61 aattttacac agataaaatg atcgatttta tcaagaaatc aaaagagaac aataaaccgt
      121 ttttcggata tcttgcattt caggtggcac atacaccatt ccaggctccg caggaataca
      181 taaagaaata tgagggagtt tacgatggtg gatgggataa aataagagaa caaaggtttg
      241 aaaagcaaaa agaactagga atatggccta cagatatgac attaccaaaa agctatccaa
      301 cttttccaga ttggaatgca ttgcctatgg atgaacaaaa acaaagatca cagatatttg
      361 cagcacatgc aggcatgata gaggacatgg actataatat aggcagggta attcaattcc
      421 tcaaagatac aggtcaatat gaaaatactt tcataatgtt tacttcagac aacggtggta
      481 gtgagccatc tgattctcct gtggtagttg gaaccttaga gggtgcaaat gataaggaat
      541 tagaggaatt taaagcagga gggttcagcg aaacctttga tgccataggc ggcaaagact
      601 cctattgggg atatggctgg cagggggctg ttatgtcaaa tactccatat tctggagtta
      661 aatcaactat gttcaatgga ggaataaaac caccatttgt aataaaggaa ccacatgcaa
      721 caaatacacc tgaactcgat attgtaaagg aatttgttca tgtcagcgat atgactccta
      781 catttctaga ttatgcaaat actatacatc ctggttcaga gtataaagga aaacaagtca
      841 gtccaatgat gggaaaatcc ataaaaccac tcttagaagg tatggttgaa caggtacata
      901 tggatgatga aacaatatcc tcagagatgt ttggtaaccg tgccgtattc atgggagact
      961 ggaaggcacg taataatata tttccaatag gagatggaga atggaagcta tttaacataa
     1021 aacaagatat tcgtgaagca acagatttgt caaaagaaca tccagatata cttgaaaaga
     1081 tggtttctgc ctatgacaac tatgcaaagg aagttggaat tataccacca aaatatagtg
     1141 aacaacaaaa gcaaggagta atggaaatgt tagcggcgac caaccaaaca gaatttacag
     1201 ggttcccaat ggagaagtta ttagcaggct acccagcgga accgtgaaac tagaaagcag
     1261 gaacaaatta aaataatact accttatttt tttattttta aaatacacaa aaaatttgta
     1321 gttgaatcca tatcatattt atgtcgtata catacaattc ttattcttag attaatgtct
     1381 tatacttatc taaatatcac ctgttatgct ctatgaatta atgttattta gtatagttta
     1441 taaaatacta ttatttaatt cataatagat tttattatgc atatgttcaa ttataaacaa
     1501 tcaataattc ttttagcaat aattctatgt gtgattacaa tatctttttc agctacatta
     1561 gtaacaaaaa ataatgattt tttcgtttta gcaaaaacta gcaatatctc taattcttcc
     1621 ctttctacat ttcaggacaa caaaagcaat atgtggctag attcttggaa cgcaggtgta
     1681 gttaaagaaa agataataga ttttgttaag aatgtcaccg atcctaccag tcctgactat
     1741 attttgccag aagatagaat agccgtcttt gataatgatg gaacgatgtg gtcagaaaaa
     1801 cctattccct tccagggctt ttttatctta gacagaattg aagaactatc gagatcatat
     1861 cctgatataa gacaggataa agtgatcagt caattgctgc agaaaaatct tacgaattta
     1921 cagcttggtg aaaaagatgt tttgtctcta gctctaataa cacattcaaa cattacacaa
     1981 acaaatttta atgatatagt tgaacaatgg atcaagactg caaaacaccc gcaaaaacaa
     2041 gttagatttg tggaattagt ttacgaacca atgatcgaac ttgttaattt ccttcaagat
     2101 aagcaattta acacatttat tgtttcaggc gggggagttg attttatgag aaaagctctt
     2161 tcgcaagttt ataatatacc ttatgaacag ataataggaa gcagtgtaaa ataccgttat
     2221 attgataatg ctggttcagg taattcaact atttttagag agccggaatt aaattccttt
     2281 gataacaacg aagcgaaacc agagaatatt caacttcaca taggtaaagt tcctgtaata
     2341 gctgtaggaa attcagacgg ggatttggaa atgcttacat acactgatga taacaacaaa
     2401 gatagtaaat cattcgaaat tataatccat catgacgacg caataagaga atatgcttat
     2461 gatagtggcg ctgaaaggat actaaaaaag gctgaaaaaa gaggctggaa tgtggttagt
     2521 atggaaaatg actttttaaa tatttttcct atgaaaaata taaccgatat aaattaaatc
     2581 ccgtagttaa caaggtaaaa gtattttcta tattttgtat acatatatgg tcgttatcaa
     2641 tattttacta cattccaata aataattaat tattcttaat cctgctcttt gatagttgat
     2701 ttagttatta caatctgtac aaaaaaacag gagtgcaaag aaaatatatt tcgatcttta
     2761 ttacagatat ccagtagata ttttgattat atgtgatgtg agataataac aaaaacgatt
     2821 ctttatatta agaatttctt caatagtcag attttcagtt ataaatttca tttcgtctta
     2881 gtattaaaat tatctgaatt aaatatggaa ttataggatt tacttatttc aattatatca
     2941 gatttgttgt cgattaacat gttgagagat gaaaaatctt ctttgatttt ggtgatgttg
     3001 taggattggt tgatttgggg gttaaactgg tctatgaaac caatgaattc tggaatactc
     3061 tctacaagac cttgggcggt ttgaaattca acctcagaat ctatggtaaa gatggagatg
     3121 atgaaatcca ggcccaagga ggaaatgatc tagtctatgc gtgtgatgat gatgatacca
     3181 tacagggtgg agaaggatct gacattattt ttggtcaaga tggagatgat tttatttatg
     3241 gtgattcagg aagcaatttc atttacggcg ggggtggtaa ctcattgtat ggcggagatg
     3301 gaaacgatca tttgtttgga ggctctggaa atgatatatt gaaaggtagc tctggcatgg
     3361 atttttttga atgtaacgag ggaattgata cagtgctgga tttcaattcg aaagaagata
     3421 ctatgaattt aaattgtgaa aatatatagg ttgagttctt tgattgatat ttgatagatt
     3481 agaaaaaaat ggaaaaagtt gtaaaaaata gaaatacact cactttattg attttaacat
     3541 caaattatga agttatttat tcaaatcttt taagttattc gagattaaat ctataactca
     3601 ttcacaaaaa aagaatatgt aaaagataca gttcatatga ataactgtga atgcagaggt
     3661 aatatgttgg atatggatga aaaagttcat gggttgaaaa atagaattta gatggatatt
     3721 gtaatttatt tcggtttatt cataatagta ggagaaagac aagaaaggat ggatttatgg
     3781 aaatgcattg ctatcagggg gcgaaaaatt cagaaaatag aggaatcaat tttaatgaat
     3841 gtagagaaaa atttgactct tcttcgtacc ctaaatttga tagataaaaa attttctaaa
     3901 aatattaata attttaatat gtattcatat caagggaaat gaatcatcaa tataatttaa
     3961 atataatttt attagtaatg attggcattt gcggtatctt tttagctttt cctctattcg
     4021 aaaatatata tacaaaagat gattctgaga attctgccat acaggaagat attgataaag
     4081 ataaatcaga aaacaacaat ataattccta atcaatatat tatatatctc aatgataata
     4141 aacaaggtag caatactatt gacccacttg aattttttaa ttctgaattg aaagataccg
     4201 gaacagaact attacatgtc tatgataatg ttgcaaaagg atttgcaata aaggttccta
     4261 atgaaaaagt cctagaaaaa ctgaaagata atccatctgt gaaatatata ggacaagata
     4321 aaagaacaga agcttttacc gattcagata gcgacaaccc aaaaatatct ataaaagtaa
     4381 attaataata ttattttttg gtttaacacc cttgactatt ttaccttatc ttctggagtt
     4441 atctaatatc ttcactagat ctttatattt taaaatagat cccatatctt aaaataaatt
     4501 gttttatatt tcacctgata caaaaaatat gtaaacataa aatatgtggc taaaataaga
     4561 gttcaaaaac aaagtcaagg accaaaagaa taaaaaagct ttatgaatgt attattctat
     4621 acattattta tttttatcat gaaatgtgtg aacatgtcag actttatcgt acgatatcta
     4681 gcgaacgaat aaagatcttc ttagctttat gattaatatg acatttgcag caa
//
LOCUS       DATIAS010000331         3090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_197792, whole genome shotgun sequence.
ACCESSION   DATIAS010000331 DATIAS010000000
VERSION     DATIAS010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197792"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1041..1580
                     /locus_tag="VLA74_06730"
     CDS             1041..1580
                     /locus_tag="VLA74_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50438.1"
                     /translation="MSAVNSIITFGAIAVIGYTLYNKFFPGLGIDQILQGIGSKIPQP
                     GGFPAGPAPVGNVPTFNLIIVRLKPVVVLPQRTDGKIWVGTLSWSASKPVEVRLLQNY
                     DADVKPDAAHGKPVTAQFAQGESAISLILQSNGAGTVPSYNAGSMNFAASQVAFHTLG
                     GIPFTVTYTVDAEAKSLSS"
     gene            complement(2077..2316)
                     /locus_tag="VLA74_06735"
     CDS             complement(2077..2316)
                     /locus_tag="VLA74_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50439.1"
                     /translation="MPKKNQPSKAGKIDAQNDEIKTIVSGLFALIGFMILIASIFIAT
                     VGQSFASVADTVFVAAILGSFTLVGTILGRIFLIK"
     gene            complement(2464..2552)
                     /locus_tag="VLA74_06740"
     tRNA            complement(2464..2552)
                     /locus_tag="VLA74_06740"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2516..2518),aa:Lys,seq:ctt)
     gene            complement(2639..>3090)
                     /locus_tag="VLA74_06745"
     CDS             complement(2639..>3090)
                     /locus_tag="VLA74_06745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50440.1"
                     /translation="KQDVHGLVDHTKKANINQGMKENDYYSPSNSNSYKEKDMDYRNN
                     YKQNPYRYDIFYTIFPNDGYYIHGPFLYSIFNSQTTENRELNDDDKIEIQNVLKILEN
                     HLKKVGVPVTFVFGIITLLKRRCFSEKSDEPLKNYLIAHNLGYLWLY"
BASE COUNT         1036 a          498 c          456 g         1100 t
ORIGIN      
        1 tgtctttttg cttctttagg taaccctata tgttgataag aaaccttgtt catagagttt
       61 cttgtcatct aaagcatttg gatgagtgat catttcaatt atcagtacag ctgtagaaat
      121 taatctgata cttagtaaca aaatttatga tttcaataat aatttaaatt ggtcatataa
      181 caaaaatggc agttcaagac tagtttatat cgtataatta tatacacggg ttcggtggta
      241 tccatcatgc tagcactcta ataaaagaat cctaacttca gtaaataaaa caagtttata
      301 aattttatct gtcgttgtta ttgtagattt atttttaaat tctgatatct tctcacgaga
      361 taataatgcc tttattttat gaaaatacat ttgagaattt caatccttga gcgggaacat
      421 tatgctcgct tctaatccaa ctcattgatt tagtcataag ttacaattcg actattatca
      481 agaaataaac tttttgatat ttttagttcc aaaattcggt ttatagtttt catctcgtta
      541 tcctataata gttctattaa aactgatccc atatagacaa atatccagca gtagcaacac
      601 ttccaatcct ataatagttc gtttaaaact atatttcgaa tttacatctt gtgtagctga
      661 atcttgcttt caatcctata atagttcgat taaaacttga acaggatgaa ttacgattac
      721 tacaattaca atccttatct aatgactcgt taattattta tttggacctt taaaatcctg
      781 tacaaattca aacttgttca agtcataact cataaatttg ctataacagt taatacataa
      841 ttttctctta ttcgctacat caatttttcc ttcgttaaat cccctcctgc agtaccaatt
      901 gtcacatgta aacgattcat tatgatttac ccaaatatcg tcaattgaat ctggatacat
      961 cgtcatatta taataaaatt atcagaccaa ttaaaaaagt ttatcttaga attttttaat
     1021 cctaacatgg ttcgctaata atgtcagcag taaattccat aattactttt ggagctatag
     1081 cagttatcgg ttatactctt tataataaat tctttccagg tcttggtatt gaccagatac
     1141 ttcagggtat aggttcaaag attccccaac ctggaggatt tcctgcagga ccggctccag
     1201 taggaaatgt acctactttc aatcttataa tagttcgatt aaaaccagtt gtagtacttc
     1261 cacaaagaac tgatggaaag atttgggtag gtacattgtc gtggtctgct agcaaaccag
     1321 ttgaagttag actattgcaa aattatgatg ctgatgtaaa accagatgca gctcacggta
     1381 aaccagtgac agcacaattt gctcaaggag aatctgcaat ctcattgata ttacaaagta
     1441 atggggcagg aacagtacca agttataatg ctggttctat gaactttgca gctagtcaag
     1501 ttgcattcca tacactaggc ggcataccat tcactgttac atatacagta gatgcagaag
     1561 caaagagttt aagtagttaa acagaagaat aataaaatcc ttattctctc tttttttcct
     1621 tttttatctt tacttaaaga agtttcttta gtagttatat gtcattaagt tcctcgagtt
     1681 attctcatga cggagacact ttttaatctc agaaaagttt cttatgaagt tagaagattg
     1741 ttttgggaat acacatttat acatatcttg ttggtcctca agaaacataa tcactcatca
     1801 atagccaagt cccgagaagt gttaaaccgc agatatctgt aaatataata actggtttga
     1861 aatagtccct gctaagattg gattagtaag tgttttccag tattctattg tttcattagc
     1921 taaatcttca ttagcatcag aaaaaattcg tctatatagt agggttctac taccttgtat
     1981 ttagattttt ggtaattagt ttgaatttgt tcgaaataga tgtaatagta taaaatgaat
     2041 gtagattaac tgttcaaaat aaaataaaat aagatattac tttattaaaa atatacgacc
     2101 aagaattgtt cctaccaaag taaaagaccc gaggattgca gcaacaaata ccgtatctgc
     2161 tactgatgcg aaagattgac ctacggttgc aataaatatt gaagctataa gaatcataaa
     2221 tccaatcaat gcgaatagtc ctgaaactat ggttttaatt tcatcatttt gagcatctat
     2281 tttaccagct ttagaaggtt ggttcttttt tggcacctag aactaatgta gaaaatgaac
     2341 taaaaatcat cgcaacagtg aagaaagata taatcagact agttaaatgc ctgttatgca
     2401 ttatctttaa tattgttatg atttattaac agatatttgt taccctttgg agtaactaat
     2461 taacgggttc ggtgggattc ggacccacga cattttaacc caataatgac tggttaagag
     2521 ccagacgctc tacctggctg agctacgaac cctctttggt tatctctatc gtaagaaaat
     2581 aaattctttt tcattattta tcatttataa aaatatagat taagaaaata attgatttct
     2641 aatacagcca aagataaccc aaattgtgag caattagata atttttcaat ggctcatcac
     2701 ttttttcact aaagcatcga cgttttaata atgttattat tccaaaaaca aaagttacag
     2761 gtacaccaac ttttttaaga tgattttcta aaatttttaa tacgttttgt atttctattt
     2821 tatcatcatc atttaattct ctattttctg tagtttgaga attaaaaatt gaataaagaa
     2881 aaggtccgtg gatataatag ccatcattag gaaaaatagt ataaaaaata tcataacggt
     2941 aaggattttg cttataatta ttacgataat ccatgtcttt ttctttataa gaattactat
     3001 tagaaggcga atagtagtca ttctctttca ttccttgatt tatgttagct tttttagtat
     3061 ggtccactag tccatgcacg tcctgtttat
//
LOCUS       DATIAS010000332         5669 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1558618, whole genome shotgun sequence.
ACCESSION   DATIAS010000332 DATIAS010000000
VERSION     DATIAS010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5669
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558618"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="VLA74_06750"
     CDS             <1..202
                     /locus_tag="VLA74_06750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50441.1"
                     /translation="YRKTIRRLVNCTISTNTHAPFLNLVETKVNRNLKKDVCANYNYE
                     TEENLLCTVRRYLRCMGSWPKI"
     gene            complement(206..697)
                     /locus_tag="VLA74_06755"
     CDS             complement(206..697)
                     /locus_tag="VLA74_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50442.1"
                     /translation="MTYNVTIYNDTMDNAIYNRQFIDIDGILDLEIVPVKGIKGVPEQ
                     IKENIINNNTTNGGGNITTFAKQELNKSAVAVPTINNTTTSERGDLGNDKDSAVAMLS
                     NTSSIPLSKSTIKTTTYGPDLSAPITGTFHIEGPILVESNDYIIKVELISRDGKSLSK
                     PIS"
     gene            complement(687..1307)
                     /locus_tag="VLA74_06760"
     CDS             complement(687..1307)
                     /locus_tag="VLA74_06760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50443.1"
                     /translation="MNIDKNTKILKNIKKAQKLYRDGIKKVLLLLILIIISSSLLIPI
                     TQIGERAFAYHQQYRLPLPSELEHQPSYAIRIPFGVGQTDHSVGYDPSQVAIPAGMSV
                     VWFNDDSNPHSVTTISSAPEQFDSGIIPPGGFSVMTFTKPGLYIYYDKMNPAVEGSII
                     VGDLVQLGKNMEMRIGGNLPFKFTELGRLVLSFPQSYTSTSTHNDI"
     gene            complement(1808..2050)
                     /locus_tag="VLA74_06765"
     CDS             complement(1808..2050)
                     /locus_tag="VLA74_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50444.1"
                     /translation="MVLGFAIYFIIPFPLSLLVLLGMNLIVIVLLNASIIKKFKLDEN
                     NSNNNGKNSGSGIRGMFNSLSLSLYDDPTAIFGYNL"
     gene            2317..2952
                     /gene="hsp20"
                     /locus_tag="VLA74_06770"
     CDS             2317..2952
                     /gene="hsp20"
                     /locus_tag="VLA74_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal heat shock protein Hsp20"
                     /protein_id="HSF50445.1"
                     /translation="MTIRDRNPYDWYRNFFSDRDGFGRWNFDDMFREFDEMRREMSRI
                     FSEQFKNIEGKVPKDLIKEYETPEVGKVREVGPIVYGYSMIIGPDGKPKIREFGNVKS
                     SPFAGRGFYEQPSLSAEREPLVDISSTDKQAKVVVEMPGVKKEHIKINAYENKVEILS
                     DDPQRKYHKVIELPTETDIETAKSTYNNGILEVIFNKKKETKPKGKEIKIE"
     gene            complement(4002..4511)
                     /locus_tag="VLA74_06775"
     CDS             complement(4002..4511)
                     /locus_tag="VLA74_06775"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSF50446.1"
                     /translation="MSSSQISRKNKDAERREVMVRRPFDELFDNFRQEMEDTFFAPFI
                     NPLRFAGIPQVMDSIKTRIPLCDIIDKGDRYLISLEVPGIQKDKIEVKATDEYITVSG
                     IEEKKTEKEEGNYVLKERTYRSFSRQIPFSENIIPTKVDATVENGILKIEVPKQKPTS
                     TEETHIKIK"
     gene            4667..>5669
                     /gene="thsB"
                     /locus_tag="VLA74_06780"
     CDS             4667..>5669
                     /gene="thsB"
                     /locus_tag="VLA74_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HSF50447.1"
                     /translation="MLVTRGVYVMASQVPIILLKEGSTETKDKDAQRNNIMAAKLVTE
                     MVKSSLGPRGMDKMLVDTVGDVTITNDGATILKEIDVEHPAAKMMVEITKSVDNEVGD
                     GTTSVVVLAGSLLEKAEELIDNKVHPTVIVDGYRKSAEKTIELLKQVAEKIDPTDKEY
                     LKKIATTSMASKLTANNSPELSDVIINAVLSTLENSADEKFKIDIDNIKVEKKAGGSI
                     RDTKLIKGIVLDKEIVHGGMPKRIENAKIALLNCPLEIEKTEFDAKININNPEQIQKF
                     INEENMMLKVMVDKISAVEANVVLCQKGIDEMAQHYLVKSGILSLRRIKESDMFKLSK
                     "
BASE COUNT         2034 a          778 c          859 g         1998 t
ORIGIN      
        1 ttatagaaag acaatcagaa gactggttaa ctgtactatt tctaccaaca cacatgcacc
       61 attcctaaat cttgttgaga caaaagtaaa caggaatctg aaaaaagatg tatgtgccaa
      121 ttacaactat gaaacagaag aaaatctttt atgtactgta agaaggtatc ttagatgcat
      181 gggtagttgg cctaagatat gatacttaac ttataggttt agataggctc tttccatctc
      241 tagatattaa ttctactttt ataatgtagt cattagactc tacaaggata ggtccttcaa
      301 tatgaaaagt tcctgtaata ggagcactta agtctggtcc atatgttgta gtctttatag
      361 ttgacttgga tagaggaatg gaagaagtat ttgaaagcat tgcaacagca ctatctttat
      421 catttcctaa atctcctctt tcgcttgtag tagtattatt tatagttggt actgctactg
      481 ctgatttatt tagttcctgt ttagcgaagg tagttatatt tcctcctccg tttgtagtat
      541 tattatttat tatattttct ttgatctgtt ctggaacacc tttaattcct tttactggaa
      601 caatctctaa atctaaaatt ccatctatgt ctataaattg tctattgtat atagcattat
      661 ccatcgtatc attgtaaatt gtaacattat atgtcattgt gagtggaggt ggaagtgtaa
      721 ctttgtggga atgatagtac tagtctccct aattctgtaa acttaaatgg taaattccct
      781 cctattctca tttccatatt ttttcctaat tgtacaagat ctccaactat tatactgcct
      841 tctactgctg gattcatctt gtcatagtat atatatagtc ctggtttcgt gaaagtcatt
      901 acagaaaatc cacctggtgg tattattcct gagtcaaatt gttctggtgc tgatgatata
      961 gtagtgacag aatgaggatt agaatcatca ttaaaccaaa cgacactcat cccagcagga
     1021 atggctactt gtgaaggatc atatcccaca gaatggtctg tttgtccaac gccaaatggg
     1081 attcgtatag cataagatgg ttgatgttct aattctgatg gtaatggaag cctgtattgt
     1141 tgatgatatg caaatgctcg ttcgccgatt tgagttattg gaatgagaag agacgaagat
     1201 attattatta gaataagaag aagtaatact ttctttatcc catctctgta taacttttga
     1261 gcctttttga tattcttcaa tatttttgta ttcttatcta tgttcaaaat gtaaggaaag
     1321 gtttttgttc ttctttttat tggtatcagt gtcagtcctt ctatttaaaa ttctattgtt
     1381 aaatttatta acaatggttg ataacaattt tgaattgtca ccctaatcta aataattaat
     1441 cttatgttat ttatatctta ctcataatat gtgagtttat attaatttta tattttattg
     1501 agttgaactt tattgtatta taaataaaag tcaaatatta tatttagaac attattggta
     1561 tcattattaa ttatggtatt atctcatata tcaattaatt tactcattat ttctgatcta
     1621 atatttatga aataattgtg ctatctctat aattgaaatt atatccaaaa tagatagaaa
     1681 caaaaaaaaa taaatataaa ttaaattaat tatcctgtgt atttatatcc aactcttact
     1741 gccattgaac cacactttgg acattttctt tttctatgtt ctttaccaca gaacatacaa
     1801 tagaatttca gagattatat ccaaaaatgg ctgtaggatc atcatatagc gagagagata
     1861 aagaattgaa cattcctctt attccgcttc cactattttt accattattg ttagaattat
     1921 tctcatcaag tttgaatttc tttatgatag atgcatttag caatacaatc actattagat
     1981 tcattcccaa caatactaaa agtgatagtg gaaaaggaat gatgaaatat attgcaaatc
     2041 ctagaaccat ggttgcaata atccattgta tatatttgat ctaaaaaatt cggattctta
     2101 ttattatcat ctccctttag cattttgatc acctcttttt gaagatgagt tttgtttgtt
     2161 aatatatgca aatcttataa atcatttgct tttttcataa taaattgaca atggaaagta
     2221 tcattctaga tgagtatgaa taaatactaa aataattaaa atgtaataac gtataaatat
     2281 tgtaatattt attacaatac ataggtgatt atgacaatga ctattcgtga tagaaatcct
     2341 tatgattggt ataggaattt ttttagtgac agagatggtt ttggcagatg gaactttgat
     2401 gatatgttta gagaatttga tgaaatgaga agagaaatga gtagaatatt ttctgaacaa
     2461 tttaaaaata ttgaaggcaa agtaccaaaa gatctaatta aagaatacga aacaccagaa
     2521 gtcggaaaag ttagagaagt gggtccaata gtatatggat attctatgat cataggacct
     2581 gatggaaagc caaaaataag agaatttggt aacgtaaaat cttctccttt tgctggaaga
     2641 ggtttctatg aacaaccatc actttctgca gaaagagaac cattagttga tatctcatct
     2701 acagataaac aagccaaagt cgtagtagaa atgcctggtg taaaaaaaga acatataaag
     2761 ataaatgctt atgagaacaa agtagaaata ttaagtgatg atccacaaag aaaatatcat
     2821 aaagtgatag agttaccaac agaaacagat attgaaactg ctaaatctac atacaataac
     2881 ggaatcctgg aagtaatatt taacaaaaag aaagagacta aacctaaagg aaaagaaatt
     2941 aaaatagaat aataagaata agaatatttt ttttaactta ttattttatt tttttatatt
     3001 ttaaattcgt agtagttatt gattacatat aatattagtc aacttgcgct ttttaactta
     3061 tgataaatct acctcatgag taatgaatgg aatagtattt ttaatttctg ttatatgtat
     3121 aaataaaaac agttttgtca aattatatat atgatataga ttacaattct ttttctcttt
     3181 ttatttgtac aacaagtaaa agtaatcaca aaacattaga tttatcctta aagtattggt
     3241 tgactctctt ttctatcaaa cttttttcta aaagagaata taatctatgt ttcaaatgta
     3301 gaaaagtaat gcttgttgag gataccatat tctatcatct gtataaattg tatatttgcc
     3361 atatttgtca agtagggagc taataaaatt ctctgctaca aatatgtttc ttcagaaata
     3421 tgtagattcc aaacacagaa ctatgtactg gttcaataca aaaccacaac caatattgtt
     3481 gatgattacc tatctgtata actgtttcat ctattatgaa tgcagatact cttttacgtc
     3541 tataaatctg acatgaacca aatcgttgaa ttcaattcca tacagaaaca taactactcc
     3601 ttttcttatc tctaaatatt actaatacct ttgatgtatt tcttaggcta ataccaaaaa
     3661 gaaaacccaa aagagtacat aacaataaca gtggatgttt tatttctgac aaatttcaac
     3721 aacgcatata cctcttcatc tttatgtatt tcttttcaaa tatcatctac cctataaatt
     3781 ggattgaagt tgttaagatt tcttatatat tgtgtctgta tattcactaa ttctcgttca
     3841 aacaatgtta caaatgattt gtatccaata ttaccaagtc acaatcatct tattatatca
     3901 taaaaataga actagcacta ctatatatgg aaaaaataga tttaatttta aaaaataatc
     3961 atatatagaa aaataaagaa attgttctag acttattatt tttatttaat ctttatatga
     4021 gtttcttcag tagaggtcgg tttttgttta ggtacttcaa tttttaaaat gccgttttct
     4081 actgtagcat caactttagt aggtatgata ttttctgaaa atggaatctg tctagagaat
     4141 gatctatatg ttctttcctt aagaacatag tttccttctt ctttttcagt ttttttctct
     4201 tctataccag aaacagtaat gtactcatct gttgctttaa cctctatctt gtctttttgt
     4261 ataccaggta cttctaaaga aattaaatat ctatctcctt tatctataat atcacacaat
     4321 ggaatccgtg ttttaattga atccataact tgtggtattc cagcgaatct tagaggattg
     4381 ataaaaggag caaaaaaagt atcttccatt tcttgtctaa agttatcaaa aagttcatca
     4441 aagggtcgac gtaccatcac ttctcttcgt tcagcatctt tattttttcg agatatttga
     4501 gaagatgaca tctttgatca ctaaataata attctcaagg aatatttatt tcttactcac
     4561 ataatgtgtt taggtggata aaaattataa attgaaatat attattaaac tctatcaatt
     4621 acattacatt attttcagta aaatatataa tatggatata cccattatgt tagtaacaag
     4681 aggtgtatat gtgatggcat ctcaagtacc aattatttta ttgaaagaag gaagcacaga
     4741 aacaaaggat aaagatgcgc aacgaaataa tatcatggca gctaaacttg ttacagaaat
     4801 ggtcaaatct agtttaggtc caagaggaat ggataaaatg cttgtagaca cagtaggtga
     4861 tgttacaata acaaatgatg gagctactat tcttaaggaa atagatgttg aacatcctgc
     4921 tgctaaaatg atggtagaaa ttacaaaaag tgtagataat gaagttggtg atggtacaac
     4981 atcggtagtt gtattagcag gatctttact agaaaaggct gaagaattaa tagacaataa
     5041 agttcatccc actgtaattg tagatggtta tagaaaaagc gcagaaaaga caattgaatt
     5101 gttaaaacaa gttgcagaaa aaatagatcc gactgataaa gagtatttga aaaaaattgc
     5161 tactacatct atggcatcta aacttactgc aaataattct ccagaattgt ctgatgtgat
     5221 tataaatgca gtactgtcta ctttggaaaa ctctgctgat gaaaaattta aaatagatat
     5281 tgataatatc aaagtagaaa agaaagcagg tggatcaatt agagatacta aattgatcaa
     5341 aggaatagta cttgataagg agattgttca tggtggaatg ccaaaaagaa ttgaaaatgc
     5401 taaaattgca ttacttaact gtcctttaga aattgagaag acagaatttg atgcaaaaat
     5461 aaatatcaat aatcctgaac aaattcagaa attcataaac gaagaaaata tgatgttaaa
     5521 agtaatggtc gataaaattt cagcagtaga ggcaaatgta gtattatgtc aaaaaggaat
     5581 tgatgaaatg gcacaacatt atttggttaa atcagggata ttatcactta gaagaatcaa
     5641 agaaagtgat atgttcaaat tatccaagg
//
LOCUS       DATIAS010000333         3844 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1832295, whole genome shotgun sequence.
ACCESSION   DATIAS010000333 DATIAS010000000
VERSION     DATIAS010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3844
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1832295"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..1833
                     /locus_tag="VLA74_06785"
     CDS             145..1833
                     /locus_tag="VLA74_06785"
                     /inference="COORDINATES: protein motif:HMM:NF019348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50448.1"
                     /translation="MSLIERNLLDFKEIKKLVSDSYSSQPQYNEIMTGVPEEYNKIKT
                     LRELLLINYKHPTVDKQIRGNLIRFLRKEENPFKGIIGYEDDVIPAINRAILSGHDIL
                     LVGQIGQAKTKLAEAISKNLLSHIPIVRGSITNDIATTIPQPDLISLLEDKEVSHYVP
                     KFTVSKETEEIIRNNGLATKIEWISGRDRYRYILATPDISVKDLVGQIDAIKIAKKGV
                     ELYNIESYSPGQLLQARHGILCIDELPVLDPRKQVALLSILQEGKFTTGSYPVFFEPD
                     LKIIATSNPIDYTHSGKIIEPLFDRLRSHIETRYPQKIIDEMLIIVQEIRPDNPENII
                     LPIFILKTIALITSMARKHGDINQDKGVSVRMSVHSTEVIIAEAERIRSIIFGVKAVP
                     RFSDIHGIYQTSKFELSELEDNNQNRIDTLNKIISNSINMISKEYIDSISSEQIKLIK
                     EEFQKNKKFVVSQKFIGTRGSDVIENSYENQLTNFPMLAEATDKISNSLEKEKDDFVN
                     RIKKNEIELNGLLFSDYRDLEYKSSIIELVLEGLRNLDNPILDRKEKDIYEYKT"
     gene            1817..3217
                     /locus_tag="VLA74_06790"
     CDS             1817..3217
                     /locus_tag="VLA74_06790"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSF50449.1"
                     /translation="MNIKHNISRDFVYIPYDHKLRDTKTNEEKEDDENISNELHNEIL
                     KTIAREIIKERTPTLEEVESTLHELIRRKQLENNIPDVDQYNTNRYQSNVKNTEEKKQ
                     VPVITRLIKKGYLKDSKKWLSSKGFTIIGGKILQDVLNELKNGDIGLHETKNLGNGTI
                     ILDTTKRYEIGDDIKLIDVPKSLLNSIQRLAKDKNHIKIPLELKIEDFEEYETMRDVR
                     VAVVYCIDLSSTMRYSTLYGNLSRIEAAKKALWTLYLLNRKYFPSDIIDIIGFGALAS
                     KIKPLDIPYLKTFEPGTDFLHYTNYQAALRLAKKILDKKPVENKRIVLITDGHPSACF
                     IDSESEQEKILSLRPYSHFYVPDKDLINSIKQTHDMSLDVNAKELVYLCYRYRQVDQF
                     IGERTIMEARRCKKLGTQIDTIMISEEDSLLNYVNEMEKYVNGRSYYINPDSIDKILL
                     TDYISNKKMILRSGRN"
     gene            3270..>3844
                     /locus_tag="VLA74_06795"
     CDS             3270..>3844
                     /locus_tag="VLA74_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HSF50450.1"
                     /translation="MSELTEVVKYLDWNGSIDILHRANKLRLFALIIGPKGTGKTSLV
                     RKFAEETGKKVFSVNFSLRTRESHLIGTKTIEKGEISFIEGVLVKSMREGGILYLDEL
                     NAAEPDMLLRLDEALDDRRQLILKEAEGQIIHANEDWFVIATINPLSHIGTKELPPQL
                     LSRFPIRLNMDYPPEDIELEIIKQHIQIDNE"
BASE COUNT         1547 a          544 c          672 g         1081 t
ORIGIN      
        1 atacaatctg tatgatgaga aaacaaacta cgagagttat cttgaattac ttgaattggc
       61 aatcgagaat cattgattat taaattcaaa tttatggtaa taaataatat tatgatccgc
      121 aagttacctg ataatgttta aattttgtct ttaatagaaa gaaatctgtt ggattttaaa
      181 gagataaaga aattagtatc tgactcttat tcatctcaac cccaatataa tgaaataatg
      241 acaggggttc cagaagaata taacaagata aaaaccctga gggaactgct attaataaac
      301 tacaaacatc caacagtgga taaacagatt agaggcaatt taattaggtt tctcaggaaa
      361 gaagaaaatc cgttcaaggg aataatcggt tatgaagacg atgtaatccc ggcaataaac
      421 agagcgatcc tttcaggtca tgacatatta cttgtaggac aaatcggaca agcaaaaact
      481 aaactagctg aagcaatatc aaaaaactta ctttcacata ttccaatagt tagaggttca
      541 ataacaaatg atattgccac gacgattccc caaccagatc ttatttcctt gttggaggat
      601 aaagaagtgt ctcattatgt acctaaattt actgtttcaa aggagactga agaaattatt
      661 cgtaataatg gacttgccac taaaatcgag tggattagtg gaagggatag atataggtat
      721 attttagcta cacctgacat atctgtaaaa gatttagtag gacaaattga tgctatcaaa
      781 attgctaaaa aaggtgtaga gttatacaat attgagtcat attccccagg acagttatta
      841 caagcaagac atggtatttt atgcatcgac gaattacctg tattagatcc gagaaaacaa
      901 gttgctttac taagtattct tcaggaagga aaatttacga ctggttcata ccctgtgttt
      961 tttgaacccg acttgaaaat aatagcaaca tccaatccaa ttgattatac ccactctgga
     1021 aaaataattg aacctttatt tgatagatta cgtagtcata tcgagacacg atatccacaa
     1081 aaaatcattg atgaaatgtt gataattgtt caagagatca gaccagataa cccagaaaac
     1141 atcatattac ctattttcat acttaagacg atagcattaa tcaccagcat ggctagaaaa
     1201 catggagata tcaatcagga taaaggagta agtgtgagga tgtcagtaca ttctaccgaa
     1261 gttattatcg cagaagcaga aagaattagg tctataatat tcggagttaa agctgtgcca
     1321 agattttcag atatccacgg tatctatcag acctcaaaat ttgagttatc tgaactggaa
     1381 gataacaatc aaaacagaat agatacatta aataaaatta tttcaaattc aatcaacatg
     1441 atttcaaaag aatacataga cagtataagt tcagaacaga taaaattaat aaaagaggaa
     1501 tttcaaaaga ataagaaatt tgttgtatcg caaaaattta ttggaaccag aggttctgat
     1561 gtaatagaaa atagctacga gaatcaatta acaaattttc caatgctagc tgaggcgaca
     1621 gacaaaatat caaatagttt ggaaaaagaa aaagatgatt ttgttaaccg gataaagaag
     1681 aatgaaattg aattaaatgg attattattt tccgattata gagatttaga atataaatca
     1741 tcaatcattg aacttgttct ggaaggttta agaaatttgg ataatcctat attagatagg
     1801 aaagaaaaag atatctatga atataaaaca taacatctcc agagattttg tttacattcc
     1861 atatgatcac aaattacgag atacgaaaac aaatgaggaa aaagaagatg acgaaaatat
     1921 ctccaatgaa ctgcacaacg aaatacttaa aacaatagcg agagaaatca taaaggaaag
     1981 gacccctacg ttagaggaag tagaatcaac attacacgaa ttaataagaa ggaaacaatt
     2041 ggaaaataat attcctgacg tagatcaata caatactaac aggtaccaat ccaatgtaaa
     2101 aaatacagaa gaaaaaaaac aagttcctgt aattactcgc cttattaaaa agggatattt
     2161 gaaggattca aaaaaatggt tgagcagtaa aggatttaca attataggag gaaaaatatt
     2221 gcaagacgtt ttgaatgaat taaaaaacgg agatattgga ttacatgaaa ctaagaatct
     2281 tggaaacggt acaattattt tggatactac aaaaagatat gaaattggcg atgacattaa
     2341 acttattgat gttccaaaat ccttattgaa ctctattcaa agacttgcaa aagataaaaa
     2401 ccatataaaa attcctctag aactgaagat tgaagatttt gaagaatatg aaacaatgag
     2461 ggatgtaaga gtagctgttg tttactgtat tgatcttagt tcaactatga gatattctac
     2521 tttatatgga aatttgagta gaatcgaagc tgccaagaaa gctttatgga cactatatct
     2581 gcttaacaga aaatattttc catcagatat tattgacatt ataggttttg gagctctcgc
     2641 ttccaaaatt aaaccgttag atattcccta cctcaagaca tttgaacctg ggactgattt
     2701 tcttcactat accaattatc aggcagcttt aagactagca aaaaaaattt tagataaaaa
     2761 gccagttgaa aacaagagaa tagtactgat tactgatggt caccctagtg catgctttat
     2821 tgatagtgaa agtgagcaag aaaaaatatt atctctgaga ccatattcgc atttttacgt
     2881 gccagataag gatctaataa attctataaa acaaactcac gacatgagtc tggacgtaaa
     2941 tgctaaagaa ttagtttatt tgtgttatag atatagacaa gttgaccaat ttataggcga
     3001 acgaacaatc atggaagcaa gaagatgtaa aaaattagga acacagatag atacaataat
     3061 gataagtgag gaagattcac tattgaatta tgtaaatgaa atggaaaagt atgttaatgg
     3121 cagatcttat tacataaatc cagactcgat agacaaaata ttactaacag attacataag
     3181 taataaaaaa atgattctac gttcaggaag aaattgattt tataaatcac agcttaattt
     3241 ataaattaaa cgacatctag taaaataaga tgagtgagct gacagaagta gtcaaatatc
     3301 tagattggaa tggatcaatc gatattttac atagagctaa taaactgagg ctattcgctt
     3361 taatcattgg tccaaaagga acgggaaaaa cttctctagt aagaaaattt gcagaagaga
     3421 caggaaaaaa ggttttttct gtgaatttta gcttaagaac aagagaatct catctcattg
     3481 gaactaaaac catcgaaaaa ggagaaatca gctttattga aggggttttg gtaaaatcaa
     3541 tgagggaagg aggaatactt tatcttgacg agttaaatgc agctgaaccc gatatgcttt
     3601 taagattaga tgaggcactc gacgatagaa gacagttaat attaaaagag gcagaaggac
     3661 aaataatcca tgctaatgaa gattggttcg tgatcgccac cattaatccg ttgtctcata
     3721 ttggaacaaa agagcttcct ccacaattat taagtagatt tcctattagg ttaaacatgg
     3781 attatccgcc tgaagatata gaactcgaaa ttataaaaca gcatatacag atagataatg
     3841 aaca
//
LOCUS       DATIAS010000334         3809 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1151735, whole genome shotgun sequence.
ACCESSION   DATIAS010000334 DATIAS010000000
VERSION     DATIAS010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3809
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151735"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1089)
                     /locus_tag="VLA74_06800"
     CDS             complement(<1..1089)
                     /locus_tag="VLA74_06800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50451.1"
                     /translation="MNIDKTIKELTNRLDIVHPYSSYSSINNCQNSNDGINYWKGKKI
                     IATKIWNDLYRKSSTYTNNYKTILTSRKPLQYFPDDYNGPISISNIGEDEKLTDEIQN
                     WNTDYYELLEYRKNPTLGRIKCSNCLLSGSNDDPIFIGIEKVFARIVSNQCNNTVNNQ
                     SHVIITYHCNVMNIFSCPFESKEVSYNKKEIEESKYPYKREDLFALHKISFAIEQAIS
                     TFFVISKDNEIIYEVDFVNDRVQEIHTNYNGEPESWEWQENVNKQLSKVKPISNIVIR
                     DENDIYNILTNREKLECLLHEYEKKNSNQLEEEQKELDIEYLKPELKAKMKEEIRKHN
                     EEQQILLKQNKKNIIDFIMDNKELIKIED"
     gene            complement(1086..1283)
                     /locus_tag="VLA74_06805"
     CDS             complement(1086..1283)
                     /locus_tag="VLA74_06805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50452.1"
                     /translation="MDQIQQKCWSIYNNDNVSQKDKLLALKIIKETCESKFSLLEKGP
                     SVMALNSLQERVEKIEVSSNK"
     gene            complement(1330..1539)
                     /locus_tag="VLA74_06810"
     CDS             complement(1330..1539)
                     /locus_tag="VLA74_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50453.1"
                     /translation="MNKQNSNYEYDLNNNNSKSKFIIEERRRLVAKLWAQSKSETEIA
                     RELHCNVSTICRDIISKETIATICI"
     gene            1943..3223
                     /locus_tag="VLA74_06815"
     CDS             1943..3223
                     /locus_tag="VLA74_06815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50454.1"
                     /translation="MPINDSFIDNLSKEGHNKEFTPYLMFKYAIKTEITRRYYERRLR
                     KFFDFIEFEMTDKNIEYRCNKFVEKAKDNVNWTLSQIIRFLQYQKERVDNKEITAGTL
                     KNFVKSLKIFCEMSDISLPWKKITRGLPNARQTANDRAPTIEEIRKLLEYPDRRIKPI
                     VYTMISSGIRLGAWDYLKWKHIIPIENEKGEISAAKIIVYAGENDEYYSFITPEAYSS
                     LLDWIKFREEYGEKFTEESWLMRDIWQTTNVNYGAKWGLATCPKKLNSYAIKRILERG
                     LWSQGLRKSLEKGEKRYEYKAAHGFRKFYKTRTEQVMRPLNVEITLGHDIGLSGSYYK
                     PTEKEVLEDYLKAVELLSINNNQKVLEKQIIELKENSKDNEYIIKAKQHEKDEQIQEL
                     KKNDKVKEDALAHLSDQLLFLTERIQEIERKQSK"
     gene            complement(3429..>3809)
                     /locus_tag="VLA74_06820"
     CDS             complement(3429..>3809)
                     /locus_tag="VLA74_06820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50455.1"
                     /translation="GECACPSLPGGTPIQCGDKCVDTATDESNCGGCGNTCQGDVTCQ
                     NGSCTTCPEGYAHPPLSEPPPLTNAPPLGCPGPSGGSNSFCDEVGGGDYFCVYRFEDG
                     RQYTCYYHVDESQGVERYTLCGSP"
BASE COUNT         1327 a          568 c          558 g         1356 t
ORIGIN      
        1 atcttctatt ttaatcaatt ctttgttatc cataataaaa tcaataatat tctttttgtt
       61 ctgttttaac agtatttgtt gttcttcatt atgctttctt atttcttctt tcatttttgc
      121 ttttaattca ggtttcaaat attctatatc taattctttt tgttcttcct ctaattgatt
      181 actattcttt ttttcatatt cgtgtaataa acattctaat ttttctctat tagtcagaat
      241 attatagata tcattttcat ctcttattac tatatttgaa attggtttaa ctttagataa
      301 ttgtttgtta acattttctt gccattccca actctctggt tctccattat aattagtatg
      361 gatttcttga actctatcat taacaaaatc aacttcgtat attatttcat tatcttttga
      421 aattacaaaa aaggtagata ttgcttgttc aattgcaaat gatattttat gtaaagcaaa
      481 cagatcttct cttttgtatg gatattttga ttcttcgatt tcttttttat tataagacac
      541 ttctttactt tcaaatggac atgaaaatat attcatgacg ttgcaatggt atgtgatgat
      601 tacatgagat tgattattaa ctgtattatt gcattgattg cttacaattc ttgcaaatac
      661 tttttcaata ccaataaaga tgggatcgtc atttgagcca cttaataaac agtttgaaca
      721 ttttattctc cctagtgtgg gattctttct atattcaagt aattcataat aatcggtatt
      781 ccaattttga atctcatccg ttaacttttc atcttctcct atatttgata tagatattgg
      841 cccattataa tcatcaggaa agtattgtaa tggttttcga gatgttagaa tagttttgta
      901 attatttgta tatgtcgagc tttttcgata tagatcattc caaatcttcg ttgcgatgat
      961 tttctttcct ttccaataat ttattccatc attgctattt tgacaattat taatagatga
     1021 ataagaagaa tatggatgta caatatccag tcgatttgtt aattctttaa ttgttttatc
     1081 tatattcatt tatttgatga cacttcaatc ttttcgaccc tctcttgtaa tgaatttaga
     1141 gccataaccg aaggtccttt ctctaataat gaaaattttg attcacatgt ttctttaatt
     1201 atctttaatg ctagtagttt gtctttttga gagacattat cattattata aatgctccag
     1261 catttctgtt gtatctgatc catagtatca atgcatcctt tataataaaa gcctaaatct
     1321 ttggctaaat caaatacaaa ttgttgcgat agtttcttta gaaatgatat ctctacaaat
     1381 agtagaaaca ttacaatgta gttctcttgc tatttctgtt tctgattttg attgtgccca
     1441 taacttggct actaatcgtc ttcgttcttc aataataaat ttagatttac tgttattatt
     1501 atttaaatca tattcataat tagaattttg cttattcatg gtcaattatt gcatttatat
     1561 atatgctgtt taaactttta tatttttact tttattcaat aaaatactcg ttttgccaat
     1621 atataaaaat tggttctacc ctttttatta ttatttttat gagaatcaag agtagaatag
     1681 gttttatatc aatagaaaca attgaagaaa ataaaagact aagttaaaga taagaactaa
     1741 gaatctaatc taatgccacc aaccaggagc cggtattggt ggaggaaagt cttcatctac
     1801 gatctcatct ccgtagtaat cgttatcatt accacaaggg tcctggaagt caatagaata
     1861 cacctgaggg tgtacaaata caacctagaa ttggacaaac ctgtgtcttt atttagaccc
     1921 attgttataa atcatataag gaatgccaat taacgattct tttattgaca atttatcaaa
     1981 agaaggacac aataaagaat tcactcctta tctaatgttc aaatatgcaa ttaaaacaga
     2041 gattactaga agatattatg aaagaagatt gaggaaattc tttgacttta tagaattcga
     2101 aatgacagat aaaaacattg aatatagatg taataaattt gttgaaaaag caaaagataa
     2161 cgtaaactgg acattaagtc agataattag atttttgcaa tatcaaaaag agagagttga
     2221 taataaagaa ataacagcag gaactctaaa gaattttgta aaatcattaa aaatattctg
     2281 tgaaatgtct gatatctcgt taccttggaa aaagattact agaggattac caaatgccag
     2341 acagactgca aatgatagag ctcccacaat tgaggaaata cgtaaactct tggaatatcc
     2401 agatcgaaga ataaaaccaa ttgtttatac tatgatatct tctggaatac gattaggagc
     2461 ttgggattac ctaaaatgga aacatatcat tcctatcgaa aacgaaaaag gagagatatc
     2521 agcagcaaaa ataattgtgt atgctggtga aaatgatgaa tattattcat tcataactcc
     2581 agaagcatat agctctttat tagactggat aaagttcaga gaagagtatg gtgagaaatt
     2641 tactgaagaa tcatggttaa tgagagacat ctggcaaaca actaacgtaa actatggagc
     2701 taaatgggga ttagcaactt gtcctaaaaa gttgaatagt tatgctatca agagaatatt
     2761 agaaagaggt ttatggtctc aaggattaag aaaatctctt gaaaaaggag agaaacgata
     2821 tgaatacaaa gcagctcatg gttttcgtaa attctataaa actagaacag aacaagttat
     2881 gcgtccattg aatgtagaga ttacccttgg tcatgatatt ggactttctg gttcatatta
     2941 caaaccaaca gaaaaagaag tattagaaga ttatttaaaa gcagtagagt tactttctat
     3001 caataacaat caaaaagttc ttgaaaaaca gattattgaa ctaaaagaaa acagcaaaga
     3061 taatgaatac attattaaag caaaacaaca tgaaaaagat gaacaaatac aagagcttaa
     3121 aaagaatgat aaagtaaaag aagatgcatt agctcatcta tcagatcaat tgttattttt
     3181 aactgaaaga attcaagaaa tagaaagaaa acaatcaaaa taatatgtaa atatttctat
     3241 gaaaagggtt ctgtgggatt tgaacccttc tataaagcga gaccaactac ttttataata
     3301 attaataatt caaggctata ataaaaatta atttaatata agataatttg acattttaat
     3361 ccagaatttt atttaaaatt agtttcaatt tcaagtcaaa ataaatgatg attagttgtt
     3421 atttcttttt atggactgcc acagagagta tatctttcta ctccttggct ttcatctacg
     3481 tggtaatagc aagtatattg tctaccatcc tcgaaacggt atacacagaa ataatcacct
     3541 cctccaacct catcacaaaa actattagat ccacctgaag gaccaggaca acctagcggt
     3601 ggtgcgtttg ttagtggtgg tggttctgat agtggaggat gagcatatcc ttctggacat
     3661 gtcgtacagc taccattttg acatgtcaca tcaccttgac aggtgttgcc acatccacca
     3721 caattgcttt catctgtagc agtatctaca cacttatctc cacattgaat tggcgtccca
     3781 ccaggcaaag atgggcatgc acattctcc
//
LOCUS       DATIAS010000335         3369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1424814, whole genome shotgun sequence.
ACCESSION   DATIAS010000335 DATIAS010000000
VERSION     DATIAS010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424814"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(237..587)
                     /locus_tag="VLA74_06825"
     CDS             complement(237..587)
                     /locus_tag="VLA74_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50456.1"
                     /translation="MIVAEKFIRSLVEKYGRHTVYTDGGTWYDEACNILRLKHYLNSP
                     LEKSLMERVNQYLKDRIECFDDYYPCVQKEDSECNLFHVYNWIQFFVSMYNDTTYNKN
                     DFIIQLQEEVRILS"
     gene            complement(584..859)
                     /locus_tag="VLA74_06830"
     CDS             complement(584..859)
                     /locus_tag="VLA74_06830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50457.1"
                     /translation="MYSLYIYFLGLSLRNTSKVLVKFRDEKRSHIAVWNWIQRFGSLQ
                     IYKRKRVSAFIFDETVIQIGGRHFWLWFCIEPIHSSVLGNTSQKRGA"
     gene            complement(1250..1633)
                     /locus_tag="VLA74_06835"
     CDS             complement(1250..1633)
                     /locus_tag="VLA74_06835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50458.1"
                     /translation="MHCQAVVGPILKNLFDVGIGEREIVAIKCLSDLILNYKGNDDTT
                     KLKFKPEVIMDLSIYDSNSKWEKENLKRAVNFVLNAANFRNLQSNTDGLINLNEFSSS
                     LVINNPANENEDNRNRVGGAADSII"
     gene            complement(1637..2734)
                     /locus_tag="VLA74_06840"
     CDS             complement(1637..2734)
                     /locus_tag="VLA74_06840"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50459.1"
                     /translation="MKYSNGMFNNNNNYDIPSYTEECIIQHWLQGKTRDEIAQAFGIS
                     KGTVSNIIAKFRNKLGHRDFDAMRELAKQLLRQNMTLDNCAIGFRVSNIMKKLGISEA
                     KTEEFLTTVFEFAQKKGISPEILREDLIEFYKISETIPFSEISIYLQKMMEEIEETEN
                     KKNQVKEEIQTLEKDKLAKEEQVRSGLREANTTLFHLNNYIETKFKLAKFGIIVEDID
                     RFTRCVEGIGRYSNYDPFKVIEKFSDREALEIGIENNQKIKNNLEINIQKLKETESEY
                     NDRLNLKYIKLKNLDELEKIVGFTIQDLKKLKGILMEIALEHKNLNIEQLKAIFFELV
                     EKLEDRIALEKENNTKMKLNLLLENQIKSKR"
     gene            3088..3216
                     /locus_tag="VLA74_06845"
     CDS             3088..3216
                     /locus_tag="VLA74_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50460.1"
                     /translation="MDSGREEKENNESREEEEIRTKDIINRYFKPIEHPKNQLVII"
BASE COUNT         1150 a          503 c          427 g         1289 t
ORIGIN      
        1 atattgatga agatgagatg tacaagcaaa tctacaaagc agaaagacaa tatatcataa
       61 ctcgaggatt ttgggataac tgaactacta ctactattac tactaaattc tacttagacg
      121 gaatggaata gaatcaaata aatcaattag tattaaaaat tcttaaaatt tattacatta
      181 aaatctgcaa actttactaa aaattttaaa tttaatccat aagtggctct gttaatttaa
      241 gataatattc tcacctcttc ttgtaactga ataataaaat cattcttgtt gtaagttgta
      301 tcattataca ttgaaacaaa gaattgtatc caattatata catgaaatag gttgcattca
      361 ctatcttctt tttgcacaca tggatagtaa tcatcaaaac attctattct gtctttcaaa
      421 tactggttaa cccgctccat tagacttttc tctaatggtg aatttagata gtgttttaat
      481 ctcagtatat tgcatgcttc atcataccaa gtaccaccat ctgtgtaaac tgtatgtctg
      541 ccatattttt caactagtga acgaataaat ttttcagcaa ctatcatgct cctctcttct
      601 gagatgtatt tccaagcact gaactatgaa ttggttcaat gcagaaccat agccaaaaat
      661 gtcgaccacc aatctgtata acagtttcat caaatatgaa tgcagatact cttttacgtt
      721 tgtagatctg caaagaacca aatctctgaa tccagttcca tacagcaata tgacttcttt
      781 tttcatctct aaatttgact aacactttag aagtattacg tagactcaaa ccaagaaagt
      841 atatataaag agaatacatt actacaattg tggatgttct atttctgaca aatttcaaca
      901 acatatattg ttagaataag acattcacag ctaaaactat ttggttaaat taacacagcc
      961 acaaataagt atttaggtta tatattttaa taatttgtct tattaattga attaactgtt
     1021 tttttaagaa tatttcaaat ttaaacaaat accaatatac aatgctaaaa gttaacaata
     1081 tttcaagaaa aagattgttt cattattttt ttattcaaaa aatcttcttt tgaactttat
     1141 tattaatttt tggaatgatt ttttattaga attataatct aatcttttag tcaaaaaata
     1201 ctatattagt agaattataa gtttatgcaa atagcgaata ttattcatct taaataatac
     1261 tatcggctgc tccacctacc cggtttctat tatcttcatt ctcatttgca ggattattaa
     1321 tcaccaaaga agaagaaaat tcatttaaat ttattaatcc atcagtattg ctctgaagat
     1381 ttctaaaatt tgcagcattt aaaacaaagt taacggctcg ttttaaattc tctttttccc
     1441 atttcgaatt gctatcataa atagatagat ccattattac ctcgggtttg aattttagtt
     1501 ttgttgtatc atcatttcct ttatagttta agataaggtc acttaagcat ttaatggcaa
     1561 ctatttctct ttctcctatt ccaacatcaa acaaattttt tagtatgggt ccaactaccg
     1621 cttggcaatg caaggtttat cgtttgcttt tgatttgatt ttcaagaagg agattgagtt
     1681 tcatttttgt attattttcc ttttccaatg caattctatc ttcaagtttt tcaactaatt
     1741 caaaaaatat tgcttttaac tgttcaatgt ttagattctt gtgttctaat gctatttcca
     1801 ttaaaatacc ctttaatttt tttaaatcct ggatggtaaa tcctactatc ttttccagtt
     1861 cgtctaaatt ctttaacttg atgtatttta ggtttaatct atcattatat tcagattctg
     1921 tctcttttaa tttttgaata ttaatttcta aattattttt tattttttgg ttgttttcaa
     1981 ttccaatttc taatgcttct cgatcagaga atttttcaat tactttgaat ggatcataat
     2041 tagaatatct tccaattcct tctacacatc tagtaaatct atcgatatct tctactatga
     2101 tgccaaattt tgctagttta aattttgtct ctatataatt atttagatga aagagtgtag
     2161 tatttgcctc tctcaatcca gatcttactt gttcttcttt tgctaattta tctttttcaa
     2221 gagtctgaat ttcttctttt acttgattct ttttattttc tgtttcttct atttcctcca
     2281 tcattttctg taaataaatt gaaatttctg aaaaaggaat tgtctccgaa attttataaa
     2341 attctattaa atcttctcta agaatttctg gagagatacc cttcttttgt gcaaattcaa
     2401 atacagtagt aagaaattct tctgtctttg cttctgatat ccctaatttt ttcataatat
     2461 tggatactct aaaacctatc gcacagttgt ctagtgtcat gttctgtcgt agtaattgtt
     2521 ttgctaattc tctcattgca tcaaagtcac ggtgtcccag tttatttcta aatttggcta
     2581 ttatgtttga aacagttcct ttacttattc caaatgcttg agctatttca tctcttgttt
     2641 tgccttgaag ccaatgttgt atgatacact cttctgtgta tgagggaatg tcatagttat
     2701 tgttgttatt aaacatacca ttactatatt tcaaagtctt taaaagtagt tgaaaaaaaa
     2761 tttatatact agttatcagt ccgtcatttt ttaggatctt tggtcagttt cgtcagtttt
     2821 ttggtcaatt actttgtgcg agaatatagg cagtacatat agtatcatct tttcgaataa
     2881 tttttataga ataaaaaacg tgcttaaatt atcttaatga aaaatcatag tatgatcttt
     2941 ttatggaaat ttatgagata aaataattat gtaatttaat ataaaatcat aattacgtta
     3001 aaaataattc tgatacaata aaaagtaggt tagggaaaaa ggagaaaaaa ggaaaatcat
     3061 caaagaaaga aaaaccaatg taaaagaatg gatagtggaa gggaagagaa agaaaataat
     3121 gagtcaagag aagaggagga gattagaaca aaagatatta taaatagata tttcaagcct
     3181 atagaacatc caaaaaatca attggtaata atataaatat aataatataa ttagttaaac
     3241 agaactaggc aacaacaata ttagcagcaa tagtagtagt agttatgaca gctctataat
     3301 actttcaaat aaagtagttg aaaaattaaa agatagagct agttcaggtc gaccatctgc
     3361 aaataacca
//
LOCUS       DATIAS010000336         2507 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_61593, whole genome shotgun sequence.
ACCESSION   DATIAS010000336 DATIAS010000000
VERSION     DATIAS010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61593"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VLA74_06850"
     CDS             complement(<1..320)
                     /locus_tag="VLA74_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50461.1"
                     /translation="MNESLSQNSTIINYNGWHKIWDIIIQGKFIDHNKRKYKKHVPGE
                     IKSKREIIMEDKKYIDLFLYDRSSGTAAFLSTDGYGNTSVIQEHHNWSKTWDIITTGC
                     FSPN"
     gene            939..1298
                     /locus_tag="VLA74_06855"
     CDS             939..1298
                     /locus_tag="VLA74_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50462.1"
                     /translation="MVISRFERNRTSTVIVIMYSLYLYFLGLSLLNTSKALVIFRDEK
                     RSYVSVWNWIHRFAESPIYKRKRVTALIIDETVIQVGNQHFWLWFCIEPVHSSVLGIF
                     LSEERNILVAEKNLLNH"
     gene            1803..2048
                     /locus_tag="VLA74_06860"
     CDS             1803..2048
                     /locus_tag="VLA74_06860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50463.1"
                     /translation="MNGRNHEITILKLKHIRFREKYAEGEVPHEAKTGSGPILLTTSF
                     PYVRDWINEHPFRNTPDAYLICNIMTGAPVKPDECGL"
     gene            2045..>2507
                     /locus_tag="VLA74_06865"
     CDS             2045..>2507
                     /locus_tag="VLA74_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50464.1"
                     /translation="MMNQLRNRILKMLEEGSIKDVKEKEKLEYLIKTKKWNSYCLRHS
                     SISSDSDFLPEYALKKKVRWSMNSKQGIRYIKRRIGDDLKNQILIRNGIISENEVKKK
                     PSVHICPRCELVNTIESKYCSKCCYPLKLEAFDEIKNDEERKLKILEEKHSK"
BASE COUNT          965 a          329 c          419 g          794 t
ORIGIN      
        1 tcattagggc taaagcatcc ggtagttatt atatcccaag tcttactcca gttgtgatgt
       61 tcttgaataa ctgatgtatt tccatagcca tcagttgaaa gaaatgctgc agtgccagaa
      121 gacctatcgt aaagaaatag atctatatat tttttgtcct ccataattat ctccctctta
      181 gattttattt ctcctggaac atgtttttta tatttacgtt tattatgatc tatgaatttt
      241 ccttggatta ttatatccca aatcttatgc catccattgt agtttataat ggtagaattt
      301 tgggataatg attcattcat attaatcata catggtaatt acatgtgaaa ttaatatcct
      361 ctttagttcc ttcaaactca tacgaaaaac ctaagtatac taaaaaaaaa ttatttgagt
      421 aaactaggta ccaccacaac ccttaactgc attgcaacca tagcaatttg tatttggtcg
      481 tgcaggcgcc ttagctgcct cttcttcttc ctgtcttaaa ttcattatca tgtaatacta
      541 ttcgaactat ataggcattt tccttgaata gtgtttgtag cgcaattgga ataagaaaga
      601 atgcttctac cagagaaagt gttcctcttt aagaagatta gaggtaatac taacttagaa
      661 attgggctat aaaggattga aaacagcaaa gaatctggta gaaggtggat tgaagggtct
      721 tttcttcaag caaatgtatg tttctagagg acataaattt agcctacaga agtaggaatg
      781 aaggtaatgc tatacaacaa atttatcgtt ttgttaccca ataagacagt ttaacataat
      841 aattagtata tttgaatatt ttcaaaggaa ttaatctata aacggccctg ttaagttaag
      901 cagtaaaagc tatagctatg aatgccccat tctaatctat ggtaataagt agatttgaaa
      961 gaaacagaac ctccactgtc attgtaatta tgtattcatt gtatttgtac tttcttggtt
     1021 taagtttact aaatacttcc aaagcattag taatctttag agatgagaaa agaagttacg
     1081 tgtctgtatg gaactggatc cacagatttg cagaatctcc gatttacaaa aggaaaagag
     1141 taacagcatt aataatagat gaaactgtta ttcaggttgg aaaccagcat ttctggctat
     1201 ggttttgtat tgaaccagta cacagttctg tgcttggaat tttcctatca gaagagagaa
     1261 acatacttgt tgctgaaaaa aatttattaa atcattagta gagaaatatg gaaaacatat
     1321 tgtatataca gatggtggaa catggtatga tgaagcatgt aacgtaattg gattgaaaca
     1381 ttatttacat tcttcaatag agaaaagcct gatggaaaga atcaatcagt attttaagga
     1441 tagaattgag tcttttgatg actattatcc acatgtatgc aaaaagatga atgtaattta
     1501 ttccatgtat aactggatac aattctttgt ttctcaatgt ataatgatac aacatttgag
     1561 aatcatttta ttaacgaatt gaatgaaagg ggtgaatata tcttaattaa cagagccaaa
     1621 aaaatataaa atatatacat taaaagaaat agtttaattt ttataaaata aggaagaaca
     1681 aaaaaagtaa aagaatatct ccatatttag aaagtgagat atgggaaaaa gatgaattat
     1741 tatcaattat aaaatatgaa ccttataaaa ggaataaggc agctttaaca ttattttggg
     1801 atttgaatgg aagaaatcat gaaattacta ttcttaaatt aaaacatatt agatttagag
     1861 aaaaatatgc agaaggcgaa gttcctcatg aagctaaaac tggatcagga ccaatactat
     1921 taactacgag ttttccttat gtaagagatt ggataaatga acatcctttt agaaatactc
     1981 cagatgctta tctaatatgc aatataatga caggagcacc tgttaaacca gatgaatgtg
     2041 gactatgatg aatcaattaa gaaatagaat cctcaaaatg ttagaagaag gatctattaa
     2101 agatgtaaaa gaaaaagaga aacttgaata tttaataaaa acaaagaaat ggaattctta
     2161 ttgtctacgg cacagctcaa taagttcaga tagtgatttc cttccagaat atgcattaaa
     2221 gaaaaaagta agatggtcaa tgaattcaaa gcaaggaata agatatataa aaagaagaat
     2281 tggagatgat cttaagaatc aaatacttat aagaaatgga attatttctg aaaacgaagt
     2341 taaaaagaaa ccatctgttc acatatgccc aagatgtgaa ttagttaata caatagaaag
     2401 caaatattgt tcaaaatgtt gttatccttt gaagctagaa gcatttgatg aaataaaaaa
     2461 tgatgaagaa agaaagttaa aaatattaga agaaaaacac tcaaaag
//
LOCUS       DATIAS010000337         8600 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1152413, whole genome shotgun sequence.
ACCESSION   DATIAS010000337 DATIAS010000000
VERSION     DATIAS010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8600
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1152413"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(983..1126)
                     /locus_tag="VLA74_06870"
     CDS             complement(983..1126)
                     /locus_tag="VLA74_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50465.1"
                     /translation="MDSAYIALNNEQNNKEIDKELIDNLRTYLGFDDEDDLRRYLKHY
                     FVE"
     gene            complement(1233..2618)
                     /locus_tag="VLA74_06875"
     CDS             complement(1233..2618)
                     /locus_tag="VLA74_06875"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HSF50466.1"
                     /translation="MSFRIDRDSLGEIEVPIDSYYGPFTSRALKQYKVSGQKSHFNLV
                     KAFAMIKRSAAIANMELNVLDRKIGQAIIQACDEILSGRHMQEFVIESINSGAGTAFN
                     MNSNEVIANRALEILGKKKGEYNVVSPNDHVNMSQSSNDTFPTAMNIAILINIKFTID
                     SLDKLIESLRKKGIEFAEIVKIGRTHLMDAIPVTLGAEFDEYVFSLEKAKEMITIAKE
                     KLEFIGLGGTAVGTGANSPRGYKNKVVRNLSELSGFNLKSSDNLFYSLQSKYEVANCS
                     SSLRNLALEIIKLANDLRLMASGPTAGLAEILIPAVHAGSSIMPGKVNPSLAECLNMI
                     CFDIIGRDVSIAMAAQAGQFELNVMLPGMLKNILDATDMLINFLPIFASNFIDGIQAN
                     TKKLRDQMENSPILITLLNPYIGYLRAAEIYKEALETRRSIRELVLEKKLMSEHELNK
                     ALSDEKILGLA"
     gene            2737..3300
                     /locus_tag="VLA74_06880"
     CDS             2737..3300
                     /locus_tag="VLA74_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TATA-box-binding protein"
                     /protein_id="HSF50467.1"
                     /translation="MPQTKPIVSIENVVASATINQTVNLNQITQIFPDVEYHPDQFPG
                     LVFRLKSPKTATLIFSSGKMVCTGAKSEDQAIKAVKSVVQKLKKGSINIENEPIIEIQ
                     NIVASASLGGKIHLELAARVLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGA
                     KKEAEVYRAVHNLHTLLEEKNLMIYEG"
     gene            complement(3316..3909)
                     /gene="pyrE"
                     /locus_tag="VLA74_06885"
     CDS             complement(3316..3909)
                     /gene="pyrE"
                     /locus_tag="VLA74_06885"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HSF50468.1"
                     /translation="MEDFRINFATFLIQSNSLKFGKFRLSSGLDSSYYVDLRNIQSHP
                     LIFHQTIISLRDKIIDDGLEFDCLATVPTSGLVFTSALAYEIFRPLIYVRKESKGYGV
                     NNLIEGKLQENQNVLLIDDVITTGQSLKHAIKVIRNNGAKVNNVLTILFRGNNEIIDK
                     YSQIDIDLKFLTTMTEISDILYSRNLIDREKREELKE"
     gene            3961..5067
                     /locus_tag="VLA74_06890"
     CDS             3961..5067
                     /locus_tag="VLA74_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50469.1"
                     /translation="MPELWLGYGTTNVVLDIKQENLSHFVPTPHIFSKEYLYNFLSNI
                     NFLKKTLFFPLSGSKAVIKILSLLVDISNSNPDFEIEIGTYPIIFQLIRTYFSNYKKP
                     ITQIEKQDLLDKIKKYNSVIFISRVYHDPLFGFHGTPSILMRNSGNNLMNQLFSSSSM
                     EFPKPGEVGEPLKMALEFCNKLNIYSIDLVSYNSGIVGIHYGNTISSFQKSISSLNSM
                     VTLYDGENRAIIASSGYEYENHLTLSNSLNFLWNIIPLLRKNGSAVLLSESSGGIGEG
                     ALKMYIEGRLSMNEIKKGNYINGLEHLLFLKCLREEYNLGIVSSLPFYYTRKKLGLTS
                     FNNVNQVLENFLSKYGRNSKVIVCPDPDSTLLRK"
     gene            5210..5707
                     /locus_tag="VLA74_06895"
     CDS             5210..5707
                     /locus_tag="VLA74_06895"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HSF50470.1"
                     /translation="MQSVLRNIGDYIIRHCEEKDLEFVININLRTLPEHYSDYFFSSI
                     LTELPEAFVVAEFKNQIVGYIMCKIEFGFSNFRKLGFVKKAHVVSIAVLEEHRGKGIG
                     KALMLEGINGILRRKSDEIYLEVRVSNEIAVKLYQDIGFMIKSRLSSYYRDGEDAYLM
                     SRDLS"
     gene            5746..5958
                     /locus_tag="VLA74_06900"
     CDS             5746..5958
                     /locus_tag="VLA74_06900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50471.1"
                     /translation="MKGNKTTGIFLLTVPSLLFFLYVYLLFSSHLDLLIIKLTITATV
                     GVVITVFVWIGYTMVSSTQNTELPDN"
     gene            complement(5970..6809)
                     /locus_tag="VLA74_06905"
     CDS             complement(5970..6809)
                     /locus_tag="VLA74_06905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase family
                     protein"
                     /protein_id="HSF50472.1"
                     /translation="MPRMLKETLKDILTTDEITKVYSSFDIIGDIIIIKIPDSLLSKK
                     EIIANTLLKKIKSVNTVFQQISPVQGDYRIRQLEFLAGEEKTITEYKEHGCIFKVDVS
                     KTYFSPRLSTERLRISRLIKDKEVIVNMFGGIGTYSIILAKKTNCTVHSIDSNPTATE
                     LCLANTKLNRVENRVIPILGDVAEVIPNKLAGIATRVLMPLPERAFEFIDLAILALKN
                     KKGIIHFFAHIKSDNKLCSLEEGKKYSNNMFGSYNSRIVSCRVIREVGPRLYQIVTDI
                     ELI"
     gene            complement(6815..>8600)
                     /locus_tag="VLA74_06910"
     CDS             complement(6815..>8600)
                     /locus_tag="VLA74_06910"
                     /inference="COORDINATES: protein motif:HMM:NF009945.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome biogenesis/translation initiation
                     ATPase RLI"
                     /protein_id="HSF50473.1"
                     /translation="SSRVAVLDEELCKPKKCGLECIIYCPINKTGGECIIQRPNDGKA
                     VISEDLCTGCGICVKKCPFEAIVIVNLPKELGEHKIHQYGINSFRLYHLPTPKKGSVV
                     GLLGRNGMGKSTIINILSGNLKPNFGEYNEKIQWNNVIENFHGNELKAYFENLANGNL
                     KLSIKPQLVYKIPKFFNGTAKEMLKKFDELDMFDLISEELGLKNSLNKNVSELSGGEL
                     QRLAVAVTTIKDADYYFFDEPSSYNDIYQRLAVAKVIQSLAKKGKSVMIIEHDLTLLD
                     YLSDYIHILYGEPGAYGIVSSLQSTKVGINNFLDGFIPSENVRFREKKFRFDSFSPTE
                     DLLQNTIVTQYSNLIKRFDSFMVKIRSGRIRKGEVIGVTGANALGKTTFMKIMAGIEK
                     TDEGVVEINPRISYKPQYISQDYDGDVKSLLYSRYQNVIEGSSVEEQIIIPMGIKKLY
                     EKNFKNLSGGELQKVAITATLMQDAEIYAFDEPSAFIDIEERIALAKFIQRFVRAQNK
                     SAIIIDHDMQLIDIVSDTLIIFEGIPGIEGYASEPMSKVKGMNQFLKNLSITYRRDDI
                     TGRPRVNKDMSRLDKVQKGSGEYYYLNR"
BASE COUNT         2770 a         1451 c         1203 g         3176 t
ORIGIN      
        1 tacgctatga caatccaaat cagttgttca aattaataat gttaccagtg tgttgaaaca
       61 ataaaatcga ttttcaatct caattgattt tgaggatata gtattacaag aaaatttcca
      121 atgatataac taccgaaact aaaaaatttt ggattaaact ggttcatgcc attaaaaaga
      181 ttttaaacct tttgtaaaaa ttatactaca taactatcta tttcggattt actgtgtggt
      241 ggaaattgag gtctaaacaa tattaaatat tacctaggtg actttttaca tatatgatgt
      301 aaaaaatcct taaaataaaa aagaattaaa tgatttaaat attatcaaag aatttatttt
      361 acagatcaag atttttggga ttgaagaatc cttttattga cattggtgtt attacatgac
      421 taagtttatt tatccacaag gagactaaat ctttatttct ctagtttatc acttttgtca
      481 ttgattttac aatcatcgat cgtctaacat ccgttaaaaa aggtaactaa gaaagcacaa
      541 acccatgtaa ttactacaaa ggagatttgt cagagaaaat tcataccttt atttaatatc
      601 attttattcc tgtatcattc taccttgaat ggaattaatt tttcgtattt tactgtgacc
      661 agtttttgtt ttatgatcat ccacatctga attaaaaaag aaactatcat gacaatcctc
      721 gcaataccaa atactattca aatcatctgg atgcatagat tatgttatat ttaatccaat
      781 ataagaaatt agtaattatc taatgtgaaa ataatagaaa ctatctataa ttgaaaactt
      841 atagattttt tttctagatc tgattagtat aaaaaaaatc ttaccatttt atacaataat
      901 tgttatattc taatttaaca gaaagatgat ttcaaaaaaa agcaattcat catataaaaa
      961 aagctcatct acatacggtt acttactcta caaaatagtg ttttaaatat ctcctcaaat
     1021 cgtcttcatc gtcaaatcct agatatgttc tcagattgtc tatcagttct ttatcgattt
     1081 ctttattgtt ttgttcatta ttaagtgcga tatatgcact gtccaaattt ttattactct
     1141 atcattgtac ggagtatgac ttaaacatta tgaatatctt ttcgaaagaa atagcatttc
     1201 aactcaaaat tctatattta ttccataaac gatcatgcca acccaagtat tttttcatct
     1261 gataatgctt tattcaattc atgttcactc atcagctttt tttccaatac taactctcga
     1321 atacttcgtc tagtttctaa agcttctttg tatatctcag ccgcccttaa atatcctatg
     1381 tatggattta aaagagttat caatattgga ctattttcca tctgatccct taatttttta
     1441 gtatttgctt gtattccatc gatgaaattg gaagcaaata ttggaagaaa gttgattaac
     1501 atatctgtag catctaaaat gttttttagc attcctggta acattacatt taactcaaat
     1561 tgtcccgcct gagcagccat tgcaattgaa acgtctcttc caattatatc aaaacatatc
     1621 atgtttaagc actctgcaag cgaaggattt accttcccgg gcattatcga agaacctgca
     1681 tgaactgctg gaattaatat ttcagctaaa ccagctgtag gtccagaagc catcagtctt
     1741 aaatcattag caagtttgat aatttctagt gctagattcc ttaaagaaga tgaacaattt
     1801 gctacttcat atttgctttg taatgaataa aacagattgt ccgaagattt taagttaaag
     1861 cctgataact ctgaaagatt tcttacgact ttatttttat atcctcttgg tgaattagcc
     1921 cctgtaccga ctgccgttcc acctaagccg ataaattcta atttttcttt tgctattgtt
     1981 atcatttcct ttgccttttc tagtgaaaaa acatattcat caaactccgc accaagtgtc
     2041 accggtatgg catccattaa atgtgttctt cctattttga caatttctgc aaattctatt
     2101 cctttttttc ttaatgattc tattagcttg tctaacgaat caattgtaaa tttgatattt
     2161 attaatatgg caatattcat ggctgttgga aaagtatcat tgctggattg agacatgtta
     2221 acatgatcat tgggactcac aacgttgtat tctcctttct ttttgccaag aatttccaat
     2281 gccctgttag ctattacctc gtttgaattc atattaaaag ctgttccggc tccagaatta
     2341 atagattcta tcacaaattc ctgcatatgt cttcctgata aaatctcgtc acaagcctga
     2401 attattgctt gtcctatctt tctatccaga acattcaatt ccatattggc tatcgctgca
     2461 gaccgtttaa tcatggcgaa agcttttacc aagttaaaat gcgatttttg cccactaact
     2521 ttgtattgtt ttaatgctct agaagtaaaa ggaccatagt atgaatctat aggaacttca
     2581 atttcaccta aggaatctct atcaattcta aacgacattt tataatgttg attccaatat
     2641 ctaaatatat taattgcttt ttatgatcag ttgactcccg ttttttagta taagtttata
     2701 taatatattt atatagtcca cagaaagcat atcaatatgc cgcaaacgaa acccattgta
     2761 agtatcgaaa atgttgttgc gtctgctaca attaatcaaa ctgtgaattt aaaccaaata
     2821 actcagatat ttccggatgt agagtatcat cctgaccaat ttccaggact agtttttaga
     2881 ttaaaatcac caaaaacggc cactttgatc tttagctctg gaaagatggt ttgcactggg
     2941 gctaaatctg aagatcaagc catcaaagca gtaaagagtg ttgtacaaaa attaaaaaaa
     3001 ggaagtatta acatagaaaa tgagcctatt atagaaattc aaaatatagt agcttcagct
     3061 agtctaggag gtaaaatcca cttagaacta gctgcccgtg tactaccacg aagtatgtat
     3121 gaacctgaac aatttcctgg actaattcac agaatgttgg atccaaagac cgttatactc
     3181 ctgtttgcca gtggtaaatt agtgtgcact ggggctaaaa aagaagccga agtttatcga
     3241 gctgttcata atttgcatac gttacttgaa gagaagaact tgatgattta tgagggataa
     3301 tcctttaagc cgtttttatt ctttaagctc ttctcttttt tctctgtcta ttaaatttct
     3361 agaataaagg atatcagaaa tttctgtcat cgttgttaaa aactttaggt caatatctat
     3421 ttgcgagtat ttatcaatta tttcattatt tcccctaaaa agtattgtta atacattgtt
     3481 gacttttgca ccattatttc tgattacctt tattgcatgt tttaaagact gtcctgttgt
     3541 aattacatcg tctattagta agacattctg attctcttgc aattttcctt caattaaatt
     3601 gttaactccg taaccttttg actcctttct tacgtatatt agaggtctga agatttcata
     3661 cgctaatgca gatgtaaata ctaaacctga tgttggaact gtagctaaac agtcaaattc
     3721 caatccatcg tctattatct tgtctcttaa ggaaattatc gtttgatgaa agattaatgg
     3781 atgactctgt atatttctga ggtctacgta ataactacta tctaatccgc tagaaagtct
     3841 aaatttgccg aatttgagcg aattagactg gattaagaaa gttgcaaaat taattcgaaa
     3901 atcttccatt tcaatcttaa tgtgaaagag atttatttta actcttttag ataattcttc
     3961 atgcccgaat tatggcttgg ctacggaact accaacgtag ttcttgatat caaacaagaa
     4021 aatttaagtc actttgtacc tacaccacat attttctcta aagaatattt atataatttt
     4081 ctgtcaaata tcaatttttt aaaaaaaact ttattctttc ctttatcggg ttctaaagcg
     4141 gtaataaaaa tactctcatt attggttgac atctctaatt ctaatccaga ttttgagata
     4201 gaaattggca cttatccaat aatatttcag ctaattagaa cttatttttc taattacaaa
     4261 aaaccaatta cacaaataga aaaacaggat ctccttgaca aaattaaaaa atataattcg
     4321 gttattttta tttccagagt atatcacgat cctttgttcg gattccatgg aactccttcc
     4381 attctaatga gaaattcagg caataatttg atgaatcaac ttttttcatc ttcttcgatg
     4441 gaatttccaa aaccaggtga agtcggagaa ccacttaaaa tggctttaga attttgtaat
     4501 aaattaaata tatactcaat agatttggtt tcctataatt caggtatcgt gggtattcat
     4561 tatggtaata ctatctctag ttttcagaaa tctatttcaa gcttaaattc catggtcaca
     4621 ttatatgatg gagaaaatag ggcaatcatt gctagctcag gatatgaata tgagaatcat
     4681 ctcactctaa gcaattcatt gaattttctc tggaatatta tacccttact tagaaaaaat
     4741 ggatctgctg tactgttatc tgaaagtagc ggcggtattg gggaaggagc attaaaaatg
     4801 tatatcgagg gaaggctatc catgaatgaa atcaaaaaag gtaattatat aaatggactg
     4861 gaacatctac tatttcttaa atgtttacgg gaagagtata atcttggaat tgtttcgtca
     4921 ctaccttttt attatacacg taaaaaactt ggccttacat cctttaacaa tgttaaccaa
     4981 gttctggaga atttcttgtc aaaatatggc aggaatagta aagtcatagt ctgtcccgat
     5041 ccagatagta cattgcttcg gaaatagatg ataaattgat attaaagcat tcttttatgt
     5101 gtagaacata gaaacatgta atctgtataa gatgtcattt tatcgattca ttttttaatt
     5161 tactgtttat ataaagttat atactttatc aaaattactc ataatacatt tgcaatctgt
     5221 actcagaaat attggtgact atattattcg tcactgtgaa gagaaagacc ttgaatttgt
     5281 gataaacata aatcttagga cacttccaga acattattct gattattttt ttagctcaat
     5341 tttgacagaa ttacctgaag ctttcgttgt tgcagaattt aaaaatcaga ttgtgggcta
     5401 tatcatgtgc aaaatagaat ttggtttttc gaattttcgt aagcttggtt ttgtaaaaaa
     5461 agcacatgtg gtgtcaattg ctgtattgga ggaacatagg ggaaaaggaa taggaaaagc
     5521 gttaatgttg gaaggaatta acggaattct taggagaaag agtgatgaaa tttatttgga
     5581 agtaagagtg agtaacgaaa tcgcagttaa attatatcaa gatattggtt ttatgattaa
     5641 atccagactt agttcatatt atcgagatgg tgaagatgct tatttgatgt cacgagacct
     5701 tagttagaga tatatatatt atctcaatgt ggttctttta taagaatgaa aggtaataaa
     5761 actacaggaa tctttctttt gactgttcct tcgttgttat tttttctata tgtttatttg
     5821 ttattttcct ctcatctgga tctattaata attaaactta ccatcacagc tacagttggt
     5881 gtagttatta ctgtatttgt ttggataggt tatactatgg tatcatcaac tcagaatacc
     5941 gaattacctg ataactagat ccaaagaaat taaattaact ctatatcagt cacgatttgg
     6001 taaagtctag gacctacttc tcttattact ctgcacgaga caattctact gttataagat
     6061 ccaaacatat tattgctata ttttttacct tcttctagtg agcataattt attatcggat
     6121 tttatatgag caaaaaagtg aattattccc ttcttatttt taagtgctaa aattgctaaa
     6181 tcaataaatt caaaagctct ctctggaaga ggcattagaa ctcttgtagc gatacctgct
     6241 agtttatttg gtattacttc agctacatct ccaagaatcg gaataactct attttcaacc
     6301 ctattcaatt tagtattagc taaacaaagt tctgtagcag taggatttga atcaatacta
     6361 tgtaccgtgc aatttgtttt tttagccagt attatagaat atgtaccaat acctccaaac
     6421 atatttacta tcacttcttt atcttttatt aatctagaaa tccttagcct ttctgttgat
     6481 aaacgtggtg aaaaatatgt ttttgaaaca tctaccttga aaatacatcc atgttccttg
     6541 tattctgtaa tggttttctc ttctcctgcc aaaaattcta attgccttat tcgatagtca
     6601 ccttgtactg gtgatatttg ttgaaatacc gtgtttacgg atttgatctt tttcaataac
     6661 gtatttgcga ttatttcttt cttggaaaga agactgtctg gaattttaat aataataata
     6721 tctccaataa tatcaaaaga tgaatatact ttagtaattt cgtcagttgt caaaatatct
     6781 tttaatgttt ctttaagcat acgtggcata ttttttatct atttaaatag taatactctc
     6841 ctgatccttt ttgtactttg tcgagtctac tcatatcctt gtttacccta ggtcttcctg
     6901 taatatcatc ccttctataa gtaattgata gattttttag gaattggttc atccctttta
     6961 ctttagacat cggttcagaa gcgtaacctt ctattcctgg aatcccttca aagattatta
     7021 atgtatcgga aacaatatct atcaattgca tatcgtggtc aataattata gctgatttat
     7081 tttgtgccct tacaaatctt tgaataaatt ttgccaacgc tattctttct tctatatcta
     7141 tgaaagcaga tggttcatca aatgcgtaaa tttcagcatc ttgcattaaa gtagcagtga
     7201 tcgctacttt ctgtagttct cctccgctta aatttttaaa atttttctca tataattttt
     7261 ttatacccat aggaataatt atctgttctt caacagaact tccctcgata acattttggt
     7321 aacgagaata taataatgac ttaacgtccc catcataatc ctgacttata tattgtggtt
     7381 tatatgatat tctaggatta atctctacca ctccctcatc agttttttct atacctgcca
     7441 ttatcttcat aaatgttgtt tttcctagtg cattagcacc tgttactcca attacctctc
     7501 cctttcttat gcgtccagat ctgattttaa ccataaagga atcaaatctt tttattaaat
     7561 tagaatattg agtaacaatg gtattttgca ataaatcttc cgttggacta aaagaatcaa
     7621 acctaaattt tttttctcta aatcgtacat tttcagaagg aataaatcca tcaagaaaat
     7681 tgtttattcc aactttagta gactgcaaac tagacactat tccataagct ccaggttccc
     7741 catataatat atgaatatag tcagacaaat aatccaataa tgtaagatcg tgttcaatga
     7801 tcataacact ttttcctttt tttgctaaac tttgaattac tttagctacc gccaatctct
     7861 gatatatatc attataagat gaaggctcat caaaaaaata ataatctgca tcttttattg
     7921 tggtaactgc cacagctaac ctctgtaatt ctccaccact taattcgctt acatttttat
     7981 tcaatgaatt cttcaatcct aattcctcgg atattagatc aaacatatct aactcgtcaa
     8041 atttttttag catttctttt gcggttccat tgaaaaattt aggtatttta tacactaatt
     8101 gaggttttat agatagtttc agatttccat ttgctaaatt ttcaaaatat gccttcaatt
     8161 catttccatg aaaattttca atcacgttat tccactgaat cttttcatta tattctccaa
     8221 aattgggttt caaattaccg gataatatgt ttattatggt agatttaccc attccgttcc
     8281 ttccaagcaa acctactaca gatccctttt tcggagttgg taaatgatat aatctgaatg
     8341 aattaatccc atattgatgg atcttatgtt ctcctaattc ttttggtaaa tttactataa
     8401 ctattgcttc gaacggacat ttctttacac atattccaca tccagtacat agatcttctg
     8461 aaattaccgc cttgccatca tttggtctct gaataataca ttctcctcct gttttattaa
     8521 taggacaata gattatgcat tctaatccac atttcttggg tttgcataat tcttcatcca
     8581 atacggctac tctagaagat
//
LOCUS       DATIAS010000338         2521 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1152429, whole genome shotgun sequence.
ACCESSION   DATIAS010000338 DATIAS010000000
VERSION     DATIAS010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1152429"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(391..807)
                     /locus_tag="VLA74_06915"
     CDS             complement(391..807)
                     /locus_tag="VLA74_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50474.1"
                     /translation="MKALPILLIAVLSLSFIVVAPISIGSSYALKDEDGRYIIVTLEN
                     VKSRSIEVTAYIYDEDKNKKIKGSPEPIDETAAQVKHTFKFDNDDLPNDVGPGTQFIV
                     CLEFKNGKGEVSCWTDTFKSESQPNRVTLDADYIRD"
     gene            complement(1552..1755)
                     /locus_tag="VLA74_06920"
     CDS             complement(1552..1755)
                     /locus_tag="VLA74_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50475.1"
                     /translation="MKQIYCIITLVSTLTIGIISLNSGITFAQNETSEIEDSPLITTE
                     QIDESMETNNTSSQIDNNTSMID"
BASE COUNT          866 a          357 c          336 g          962 t
ORIGIN      
        1 agaacagaaa taaaaaattt atactatcaa attttttata atcaaatatt tttaaataaa
       61 aataaaatct ttttctataa cttaaataat attaagtgaa agattatatt tacaagaatt
      121 ttattttgtt aaatttaaga aagttatctc tttcctgtaa aaaagctata caattaaaaa
      181 gatagaaatt caaacaaata ataaaattat gcaagaaata ttatattcta ttttgtaata
      241 ttgattgaaa ggatctagag ttaaacaaaa ataaacaagt agactgaaaa atatcctcta
      301 aattgaaaac ataatctaat ataataaaaa catagaacta ttggaaatta caaatttttg
      361 attgatttga ttggttataa aaaataaggt ttagtctcgt atataatctg catccagtgt
      421 taccctattt ggttgtgatt cagacttgaa ggtatctgtc caacacgata cttctccctt
      481 tccatttttg aattctagac atacgatgaa ttgtgttcct gggcctacat cattaggcaa
      541 atcgtcatta tcgaatttaa atgtgtgttt cacctgtgca gcagtttcat cgataggctc
      601 aggactgcct ttgatttttt tattcttatc ttcgtcatat atatatgctg taacttctat
      661 acttctgctc tttacatttt ctaacgtcac tataatatat ctaccgtctt catcctttag
      721 tgcatatgag ctgccaattg aaatgggggc tacaactata aagcttaaac ttaatacagc
      781 aattagtaat attggtaacg ctttcatatt atgttatatt aacatatatg tctatatata
      841 tactgcgtta aatatttcgg aaatgatata cagaaataat tgtatgaaat ttagaacaat
      901 tatgcaatat ttgtactatg cataattgac atataattct aggaaataaa tgattcagac
      961 ctcaataata tgtattactc tcatattttt ttttatcttt gcatctttgc aatcaaatat
     1021 attagttgta ttataatata gtagtagcaa atccatttct gcttcattaa caagtagatt
     1081 gcaagcactt acagcaaacc ttttgaccaa aagagagagt tggtagaagt cttataaggc
     1141 tccaatccta ccaactcttt agaaattaac agttttgata aaacaaaata ctaaattggc
     1201 tcttaattta agataatatt catatcagta attaaatttc tttattatgc ttttttataa
     1261 agaaataaaa cttatagatg ttaaatcgta aatcaaagtt tagaaagtaa gaataacaat
     1321 agataaaaaa ttctactcat gattttgtta attttatgga tgcgctataa ccttgaaaaa
     1381 ttttattttt taaaataagc ttctaaataa taagagctaa atatgataat gtaatatatt
     1441 atattagact cttattttca caccgctatc ggtattatcg attttaacta aatttaatag
     1501 ttgtttttaa tataaaatat aaaaataatt tcaaatttat tatggaatta tctagtcaat
     1561 catagatgta ttattgtcaa tttgagatga tgtattgttt gtttccattg actcgtctat
     1621 ttgttccgtt gtaattaaag gagaatcctc aatttctgat gtttcatttt gagcaaaagt
     1681 gattcccgaa tttaaagata ttattcctat ggtgagagtt gaaactaaag taataataca
     1741 atagatttgc ttcattaaat ttctttgata atatgccttt ttaaatattg tcttttggaa
     1801 agaaagataa aagctaaata cttgttagta gtagaaccct actacatgga cgattccact
     1861 cccgacgggc ccgtagtttt ctcgggttca tctacctcta cctaattttc actattaacg
     1921 cttccaatga tttggatata acataaactg atgtcaatac tgacaaaggg aatacataac
     1981 tatgatagtg gatcttctgt ttcagacaaa tttgatcaac atgcatgtta gaatagggta
     2041 ttcacagcta aattcatttt tgttaagagc ctatcccaaa attatcctcc tgtaaacaat
     2101 attaaggcta ttggctaact gtacaagacc aagataattc ttatctttct tttcatatct
     2161 tgtaaacaat ttcctgaatc ggttatgcca agaatttgtt ctttctctac aacctacatc
     2221 ttcttgttgg atgctttttt cgaaataatt tttcttcttc tcttcgatgt ctagtgtgtg
     2281 gattatatcc tcttttgata atttcttgtt ctacttcttt ggagtgatat gctttgtcaa
     2341 gacatagatt ctgcttcttt ttcttatttc tatctgttga tgttgatgtt gttgttgttg
     2401 atgatgattg tcttttgata gctatactgt caactgtatc aattgcaaca gtaacatcat
     2461 tatgagtatt tgcagatgtt ataacagcag atagagaaat acctctttat ctgtaagaat
     2521 a
//
LOCUS       DATIAS010000339         2768 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1152504, whole genome shotgun sequence.
ACCESSION   DATIAS010000339 DATIAS010000000
VERSION     DATIAS010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1152504"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLA74_06925"
     CDS             <1..249
                     /locus_tag="VLA74_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50476.1"
                     /translation="YPTKKSGFEWFMNNYDPESDPYLHNYKSIVKNEDGSYNIGERSR
                     MGVYSKDGIGYPKKIWKLITLQSSQKKAIGINLQTGRM"
     gene            177..731
                     /locus_tag="VLA74_06930"
     CDS             177..731
                     /locus_tag="VLA74_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50477.1"
                     /translation="METYNFTELSKKGYWYKPSDWKNVEITGEYLYKKGKGPGITHYA
                     RSEDQSTINNGCGASSYKLNIHFDGTSSISKEQTHPKHSIIPMNKNPFGKLDKDWFRF
                     KGIIYNLPDGSVKLESWLDPFLNNTWIKIAEYQDKGGWGKNGNKCQGKDDHIITWGSP
                     TATFRWDDALVHFRNLSVREINRQ"
     gene            complement(1482..1778)
                     /locus_tag="VLA74_06935"
     CDS             complement(1482..1778)
                     /locus_tag="VLA74_06935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50478.1"
                     /translation="MDREEILRSLFNKATEDTIETLPYTIQVFQDPLYDLKKTVTNDL
                     DFLLGAFFAQVLLFYSVYCSNKDIKPTIEESNQFNYVLFSKAEEYKTIIKELMV"
     gene            2342..>2768
                     /locus_tag="VLA74_06940"
     CDS             2342..>2768
                     /locus_tag="VLA74_06940"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HSF50479.1"
                     /translation="MALPKYNPHSQLIDIFNILEIILRVLIKNTPHIELHIKESNYIR
                     DIIFGFGDGINTSLGIVAGVGGALIVADVVILAALVGMFTGAKAMAVQNYLAVKSQRE
                     ILESEIKREEFEIKNMPNEERKEIEDIYRAKGFEGEQLKN"
BASE COUNT          994 a          367 c          453 g          954 t
ORIGIN      
        1 tatcctacta aaaaaagcgg ttttgaatgg tttatgaata attatgatcc agaatcagat
       61 ccatatttgc ataattataa gagtattgta aagaacgaag atggaagtta taacataggc
      121 gaaagatccc gaatgggcgt atattccaaa gacggaatag gttatccaaa gaaaatatgg
      181 aaacttataa ctttacagag ctctcaaaaa aaggctattg gtataaacct tcagactgga
      241 agaatgtaga aattactgga gagtatttat ataaaaaagg taaaggtcca ggtataactc
      301 attacgctcg atccgaggac caatctacaa taaataatgg atgtggtgca tcaagctata
      361 agcttaatat ccatttcgat ggaacgagta gtataagcaa agagcaaaca catccaaaac
      421 actctataat acctatgaat aaaaatccgt ttggtaaact tgacaaagat tggtttagat
      481 ttaaaggtat tatatataat cttcctgacg gtagtgtaaa gcttgaaagc tggttggatc
      541 cttttctaaa taacacttgg ataaaaattg cagaatacca agacaaagga ggatggggta
      601 aaaatggtaa taaatgtcaa ggcaaagacg atcatataat tacatggggg tctcccactg
      661 caacttttag atgggatgat gccttggtcc attttagaaa tttgagtgta agagaaatca
      721 accgccagta atttcagact taatttccta atgttaagta taataacaat cactttctac
      781 tcaagtaata attcgtagtt aatgttttta tccaccttgc agaagtcact ttatcttgat
      841 atttttagtg gcataaatat taataaataa gttaatatct agtcacatag catttatagt
      901 atatattttg atataatagt tgctgttatt tttgttttca catgtaatag atatttaatt
      961 atctttttct tttttttacc ttctataatt atttaatcta ttactctagc gatattttca
     1021 ctaacaacaa taagatgaat agtaaaaaat ttttgtcttt cttgattaat tagggttgta
     1081 tttgttattt attctgtaga tacgtacaaa tatgtttctt gtttgtcttt acctgccatt
     1141 actcactttt tacaggattc caatatatgg gagtattgca tccgtaatat tgtgccatta
     1201 caacaggaaa tacataatta ggaatatcct tagagttcta tatttaaatc agtatggtgg
     1261 gccatagaga gaaccgggcc cgttgggagt acaccgatag cggtgcaaaa ataagagtcc
     1321 aatgtatggt agtaaagaga taatatttat gatttacttt tgaatacata tttttaaaag
     1381 actagtataa tttctttaga ttttgactat ttccagtgtt ttgtgttgtc taagaaaacc
     1441 tgaccatatt gttttcctag agttgattct tttaagtatt ttcataccat taattctttg
     1501 ataatagttt tgtattcttc tgctttcgaa aataatacat aattaaattg atttgattct
     1561 tcaattgttg gtttgatatc tttgttggaa caataaacag aataaaacaa aagtacttgt
     1621 gcaaaaaatg cccctaaaag aaaatccaaa tcattggtta ctgttttctt taaatcgtat
     1681 aaagggtcct gaaatacttg aattgtataa ggcagagttt ctattgtatc ttcagtggct
     1741 ttattaaata ggcttctaag aatttcttct ctatccaata tttatcaata atataaactt
     1801 gttaaaagat tttgttttgt ttgttcacat actatattga atgatttatt taatttaata
     1861 tgatattttc cacgattcgt gaaaagtaaa tgataaccat ggtaattaat tgatagcata
     1921 taaaaacaag atgaaaacaa taaaatattt gaaggacttt ttaatgcctc aatatttgcg
     1981 gattccacta tattatccac ttttatatga gtcatattac cgatgctaat taatagatgg
     2041 aagaatcctt gaagggctta ctttgtgaaa aatttcaatg ctataacaag ccaagaaatc
     2101 aatgttctaa atgttaaatt tattattgaa ttgaacatgt aaaatcacat attcatactg
     2161 acactttcca agatttacag agggaacaag aactagatat agacaatact agatagattc
     2221 ttttttatta ttaatcactt tattggtaac aataagtatt aagttctcga tttataaata
     2281 tattttatct tttcaatgtg atactttaat taaaaaataa aattaaaaag atatatgaag
     2341 attggcttta ccaaaataca atccacattc ccaattaata gatatcttta atatattaga
     2401 aattatttta cgagtattga ttaagaatac ccctcatata gaattacaca tcaaagaaag
     2461 taattatatc cgggatatta tattcggatt tggagacggt ataaacacct ctctgggaat
     2521 tgttgctgga gtaggaggag ctttaatagt agctgatgtt gttattcttg ctgcattagt
     2581 aggaatgttc acaggtgcaa aagcaatggc agtccagaat tatcttgcag taaagtctca
     2641 gcgggaaata ttagaatcag aaataaagcg tgaagagttt gagataaaaa atatgcctaa
     2701 tgaagaaaga aaggagatcg aagatatata ccgtgccaaa ggatttgaag gagagcagct
     2761 taagaata
//
LOCUS       DATIAS010000340         3971 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1016008, whole genome shotgun sequence.
ACCESSION   DATIAS010000340 DATIAS010000000
VERSION     DATIAS010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3971
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016008"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2250)
                     /locus_tag="VLA74_06945"
     CDS             complement(<1..2250)
                     /locus_tag="VLA74_06945"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSF50480.1"
                     /translation="MSSNTTNKWHSLTAQQVLDNLHSRLDGLTDSEATERLEKYGLNQ
                     IEKEKQRSPFFIFIRQLKDPMVLILFVATFISFVLGEIIDGIIIVAILIMTTIVGFIQ
                     EFRSEKAIDALTKMTATTCRVLRDYKEKIMDTKYLVPGDIILLNPGDKIPADSYIIEA
                     HNLETNEAPLTGESLPIEKMQTVLPEETQIQDRKNVLYAITTIANGRAKAVIFETGSN
                     TEIGKISTVVQSIVTQKTPFELKIKHTVKLLSLSMLIIVGIVFAISLIRGLPILEILI
                     WSISLAVAAVPEALPAIITTSLTIGAYRMAKKNALIRRLAAVETLGSTTIICSDKTGT
                     LTKGEMTVKQVYMYDNHFIEVTGVGYNTKGSLSSKSNINKNDLMLLVKCTVLCNDAKI
                     ELLQDDIIKMFGDPTEIALLIFAKKIGIAKDELSSLSPRLREIPFTAERKMMITFHRS
                     EKTKDVEVFAKGAPEIILNHCNRVLKDGQFLPLTDKIKDHIISINYKMANDGLRVLAL
                     ATTSNEVQTGKILVERNINNNNNNNYFLFLGLVGIIDPPRKEVKDAISRCKTSGINVV
                     MITGDQKFTALAIAKEIGIVNKYETDIEKIIVSGQELEKIDFDSFNKENKKLNNIKIY
                     SRVLPEQKLKIVQILKNNGHIVAVTGDGVNDAPALKTAHIGVAMGITGTDVAKESSSM
                     ILADDNFATIVSAIHEGRRIFDNIKKYLVYLLSANISELLILTFAIVMGWPSPLLAKH
                     ILYINLATDG"
     gene            complement(2412..2699)
                     /locus_tag="VLA74_06950"
     CDS             complement(2412..2699)
                     /locus_tag="VLA74_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50481.1"
                     /translation="MASIYDSSKFVIGNKIIEAKEKGIIELHKTTLDNPRVNNVQAIP
                     FNNNDETNATTFDKNNIENGTSFIDKMISETTEPELVAQLKKVKQNCVFNY"
     gene            complement(2683..3021)
                     /locus_tag="VLA74_06955"
     CDS             complement(2683..3021)
                     /locus_tag="VLA74_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50482.1"
                     /translation="MLSILSDTEKAVVETIRMRLSTEQALQYMKDNEFSVSRATYFRH
                     KKKLEEKKLERLYHMANIGFDYQHLDRIDGLELIEKKMWEEYNKEKGPWKRVQILKNI
                     GDPAIFGIDL"
     gene            complement(3500..3625)
                     /locus_tag="VLA74_06960"
     CDS             complement(3500..3625)
                     /locus_tag="VLA74_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50483.1"
                     /translation="MKYRGYRHIIITDKNYRILKRLGNASDSFNDVISDILEKIT"
BASE COUNT         1201 a          672 c          537 g         1561 t
ORIGIN      
        1 gccatctgtt gccaaattta tgtatagaat atgttttgca agtaaaggag atggccatcc
       61 cattactata gcaaaggtta gtattaataa ttcactaatg ttggcagata ataggtaaac
      121 taggtatttt ttgatgttgt cgaaaattcg tctcccttca tgaatagcag atactatagt
      181 tgcaaaattg tcatctgcaa gtatcattga tgatgattct ttagcgacat cagtacctgt
      241 gattcccata gctactccta tatgggctgt cttcaatgct ggtgcatcgt ttacaccgtc
      301 accagtaact gcaactatat gtccattgtt ttttagtatt tgtactatct ttagtttttg
      361 ctcaggtaat actcttgaat aaatcttgat attatttaat tttttatttt ctttattaaa
      421 ggaatcaaaa tctattttct ctagctcttg tccagataca attatttttt ctatgtcagt
      481 ttcatatttg tttacaattc caatttcttt tgctatagct aatgcagtaa atttctggtc
      541 acctgttatc ataactacat tgattccaga agtcttacac cgacttatag catctttgac
      601 ttcttttcta ggcgggtcta ttatgcctac aagtcccaga aataaaaaat aattattgtt
      661 attgttatta tttatattcc tctctaccag tattttacct gtttgaactt cattgctggt
      721 ggtagcaagt gctagaactc tgagtccatc attagccatt ttgtaattta ttgaaatgat
      781 atgatcttta attttatctg tcaaaggcaa aaattgacca tcttttagaa ctctattaca
      841 atgattcaga atgatttctg gtgcaccttt agcaaaaacc tccacatctt tcgttttttc
      901 tgatctatga aaggttatca tcatctttct ttcggcagta aaaggaattt ctcttaatct
      961 aggagacaag ctagataatt catcttttgc aattcctatt ttctttgcaa agatcaataa
     1021 tgcaatttct gttggatccc caaacatttt gataatatca tcttgaagta attctatttt
     1081 tgcatcattg cataatactg tacatttaac aagcaacatt agatcgtttt tgttaatgtt
     1141 tgatttagaa gatagactac ctttagtatt atatccaact ccagtaactt ctatgaaatg
     1201 attatcatac atgtaaactt gttttactgt catttcacct tttgtcaacg ttcctgtttt
     1261 atcactgcaa attattgttg tagagcctag tgtctcaaca gctgccaatc ttctaattaa
     1321 tgcatttttt ttagccatcc tatatgctcc tattgtaagt gaagttgtaa ttatagcagg
     1381 caacgcttct ggaactgccg caacagctaa actaatactc caaatcagaa tttctagtat
     1441 aggtaaacca cggattaaag atatagcaaa tacaatacct actattatta gcatggataa
     1501 actaagtaat tttactgtat gtttgatctt taattcaaaa ggagtttttt gagtaacgat
     1561 actttgcaca actgtactta tttttcctat ctctgtattg cttcctgtct caaaaattac
     1621 cgcctttgct ctaccatttg ctattgtagt aatcgcatac aatacattct ttctatcttg
     1681 aatctgtgtc tcttctggca atactgtctg catcttttct ataggtagtg attctccagt
     1741 taacggtgct tcgtttgttt ccagattatg tgcttcaata atatatgaat ctgcaggaat
     1801 cttatctcct ggatttagaa gaattatatc tccaggtaca aggtattttg tatccataat
     1861 tttttcttta tagtctcgaa gaactctgca tgttgttgca gtcattttcg ttagagcgtc
     1921 aatagccttt tctgatctaa actcttgaat aaatcctaca atagtagtca taattaatat
     1981 tgcaactata ataattccat ctattatttc tcctaaaaca aatgaaatga atgttgctac
     2041 aaaaagtatt aacaccatgg gatctttaag ttgccttata aatataaaaa atggagatct
     2101 ctgtttttct ttttcaatct gattaagacc atatttttcc agtctctctg ttgcttctga
     2161 gtctgtaaga ccatctaaac gactatgaag attgtccaaa acttgttgtg cagttaaact
     2221 gtgccatttg ttagttgtgt tagaagacat aatacgcaga tgtcatgata taaaaaagag
     2281 gttgaaataa aaaagttact attatttcaa ataatttagt atacaatttg ttttagctac
     2341 tttccgtaac ttactatatt ttcattcttt cttcttcttc ttctttatct acttgttatt
     2401 gatggtatat tttagtaatt aaagacacaa ttttgtttta ctttttttag ttgtgctaca
     2461 agttctggct cggtagtttc acttatcatt ttatcaataa atgaagttcc attttcaata
     2521 ttattcttat caaatgttgt tgcatttgtc tcatcattat tattaaacgg aattgcttga
     2581 acattattta ctcttggatt atctagagta gttttgtgga gttctataat acctttttct
     2641 tttgcttcaa ttattttatt accaatcaca aatttagaac tatcataaat cgatgccaaa
     2701 tatggctgga tctccaatat tctttagtat ctggactctc ttccaaggac ctttttcttt
     2761 gttatattct tcccacatct ttttctctat taactctaga ccatcaatcc tatccagatg
     2821 ttgatagtca aagcctatat tagccatatg ataaagtctt tctagtttct tttcttccag
     2881 tttcttttta tgtctaaagt atgtagctct agaaacagaa aattcattat ctttcatata
     2941 ttgtaaagcc tgttccgttg ataggcgcat tcttattgtt tctacaactg ctttttctgt
     3001 atcacttaat atgcttaaca tgagactaaa aatatcgcct tatcggctat gcaaaacatt
     3061 tgctttttaa attcaataac aacaatattg aatgagctca tatggataaa catcttatca
     3121 taatatagat atggattcac gatataatat caataaggaa aaggttagct ttatgcattt
     3181 ccttttgtat ttgtgttttt atactgatat aatataataa actagtaata taacatctac
     3241 catattccaa cttaaaatta tttgttatga tgaatatgaa actggttttg tacaagatga
     3301 ataatctaaa tcggttgtac attgcttaac tttataaaac tcgtataacg agaatcaaac
     3361 tcacttgaaa gaacttgcaa tttcttgaaa gtttttatct tttgcaatag ctatgcagtc
     3421 ctgtcttttt atcattcttt gtttctcatt cattatacta tattcgttac ccatatattc
     3481 taacatagag tttttatttt tatgttattt tctctaaaat atcagaaatt acatcattga
     3541 aagaatcact tgcatttcct aatcttttaa ggattcgata gtttttgtct gttattataa
     3601 tatgtctgta acctctgtat ttcataaatt aataaggtga ttatcttaat ataaagggaa
     3661 gtaaggactt ttagttacct gtacatttgg accataaaac aaaaaaattc aaactaaagg
     3721 aactattatc taatgacaag aaaagcactc tatacttcag taatctcaga tggaaagaaa
     3781 aaaaaacatg ccccaaatgt gattactaaa gttaagtatc atatcttagg ccaacaacca
     3841 aaacatctaa gataccttct tacagtacat aacagattat cttctgtttc atagttgtaa
     3901 ttggcacata catctttttt cagattcctg tttacttttg tttctactgg attcaggaat
     3961 ggtgcatatg t
//
LOCUS       DATIAS010000341         3685 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_199389, whole genome shotgun sequence.
ACCESSION   DATIAS010000341 DATIAS010000000
VERSION     DATIAS010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199389"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            224..850
                     /locus_tag="VLA74_06965"
     CDS             224..850
                     /locus_tag="VLA74_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50484.1"
                     /translation="MDFLNELLFSSENSYLFVFAIIFVLSIIPILTPPTWAIVVMSYT
                     LNPALDAVLLSVISASAATLGRFLLMRFSSIGRKVINDERKSSLNKLKDYLEKKKYGY
                     FLGTMLFALLPLPSNMLFVSYGLMKVRSLQIIAGFWIGRFSVYLLMIYLSKNILLSIT
                     DIIDLSFASVIWIDVAGIIMTILILLIDWNKLIFEKKIGFIKPRRFIF"
     gene            complement(852..1964)
                     /locus_tag="VLA74_06970"
     CDS             complement(852..1964)
                     /locus_tag="VLA74_06970"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSF50485.1"
                     /translation="MSRVRVTGLSKKYGNFTAIENFSIQIADGEFLVLLGPSGCGKTT
                     IIRCISGLIDPSDGQIFIDDNLVNGIPPKDRDVAVVFQNYALYPHMTVYDNIAFPLKM
                     RKLSKEEVKDKVIKISQMLGISELLKRKPRELSGGQMQRVALGRALVREPKLFLLDEP
                     LSNLDSKLRIQMRSEIKKLQKRVGVTTIYITHDQTEAMGMADKIVILNEGIIQQVGTP
                     EEVYKKPQNIFVANFIGNPQINILNFEIIRKEDGRPISLKAENMSINIPKIWYDVLSS
                     FGESIKNISLGIRPKDIFLADYSDSNSMHFKGELCFVEMLGDETIYEFKLENNSIIHV
                     SNLSVDSSLKNGSKLILETKYEDILLFNSDTGIRIL"
     gene            2093..3454
                     /locus_tag="VLA74_06975"
     CDS             2093..3454
                     /locus_tag="VLA74_06975"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSF50486.1"
                     /translation="MSSSNEAHVIKFLEPKNIPILLMIPLSLFCSITVFNPVTIINSY
                     SQEETIKLTAIFAEPKERWDILIEKALEKLNEIHPDKKIQIEYSVLPYSDTRTQILTA
                     MAGKSELDLVSLDQIWLGEFAEAGFLTDITEKTKVWNKSSDWYENNWLGGIYKDKVYG
                     IWAWTDVRALWYWKDLLNQSGLSSEKLKTWDGYLQGFKILSERLPDTNIQPIHLTSAN
                     HVPDMWYPYLWMLGGNILELREGHPSKGNYWFPTYNSKQGVMALEFLRDQINTGIKPQ
                     INHFWGQEFADKKFAVMLEGSWILGHFPKEEWKNLKEKIGLITMFPVPNNTTKTSTMM
                     GGWLFSIPETSKHKDLAWELITIMLDPDVLMPMLLKEGYLPTQKTIAEGIYSKEMKST
                     IPYYEDLISLIPYAKGRPNIPEYPQIADHIRTAIEEVYQGADPKQSLDKAVEDSMKVL
                     GWK"
BASE COUNT         1238 a          612 c          579 g         1256 t
ORIGIN      
        1 ggctagtcat aaatcattga acatatgttc ttactaacat attaaaattt caacagaata
       61 tctgaatcat aatgtcttct aataataaaa tatctattct aattataatt ggaaagataa
      121 taatacacgt tgaaaagctc atttcagtct attcatagat atttatcata aattattgct
      181 caagaaataa tagacccacc aatctttaaa gaactagtat tgtttggact tcctaaatga
      241 actactcttc tcttccgaaa attcatacct cttcgttttc gcaattatat ttgttttaag
      301 tatcataccc attctcactc ccccaacatg ggccatagtg gttatgtctt atactttaaa
      361 tcctgctttg gacgctgttc ttctttcagt gattagtgca tctgcagcta cattaggaag
      421 atttttactg atgagatttt cttctatagg aagaaaagta ataaatgacg agcgtaaatc
      481 tagtctgaac aaactaaaag attatttgga aaagaaaaaa tatggatatt ttctaggaac
      541 tatgcttttt gctttattac cgttgccaag caacatgctc tttgtttctt acgggcttat
      601 gaaagttcga tcattacaga taatagcagg tttctggatt ggaagattct cggtatatct
      661 gctaatgatt tatttatcaa aaaatatttt actttcaatt acagatataa tagatctgag
      721 ctttgcttct gtaatatgga tagatgttgc aggtataatt atgactatcc taatactatt
      781 aattgattgg aataaattaa ttttcgaaaa aaaaattgga tttattaaac caagaagatt
      841 tatcttttag attataaaat cctgatacct gtatcggaat tgaagaggag tatatcttca
      901 tacttggttt ccaaaataag tttgctgcca tttttaagag aagaatctac agataaatta
      961 cttacatgaa tgatactatt attttcaagt ttaaattcat atattgtttc atctcctagc
     1021 atttccacaa agcaaagttc tcctttgaaa tgcatagaat tagaatcact ataatcagct
     1081 aaaaatatat cttttggtct gatacccaaa gatatatttt ttatagattc tccaaaagac
     1141 gaaagtacat cataccatat cttaggaatg tttatagaca tattctcagc tttcaaggaa
     1201 attggtcgac catcttcctt tcttattatc tcaaaattca aaatatttat ttgaggattt
     1261 cctataaaat ttgcaacaaa aatattctgt ggctttttat aaacttcttc tggagtacct
     1321 acctgttgaa ttattccctc atttaagata actattttgt cagccatacc cattgcttca
     1381 gtctgatcat gagtaatgta tattgtagta acgccgacac gtttttgaag tttttttatt
     1441 tctgatctca tttgtatcct cagttttgaa tctagattgc ttagaggttc atccaacaaa
     1501 aatagtttag gttctctgac taacgctctt cctaatgcta ccctctgcat ttggcctcca
     1561 cttaattctc taggttttct ttttagcaac tctgaaatgc ccagcatttg agagattttt
     1621 attactttat ctttaacttc ttctttagat aattttctca ttttaagagg aaatgcgatg
     1681 ttgtcgtaga ctgtcatatg aggatataat gcataattct ggaaaactac cgcaacatcg
     1741 cgatcttttg gaggaattcc attcaccaaa ttgtcgtcta taaatatttg tccatcacta
     1801 gggtctatta gtccagatat acatcgtatg attgttgttt tcccacatcc ggaaggaccc
     1861 aataatacca agaattcacc atctgctatt tggattgaaa aattttcaat tgctgtaaag
     1921 tttccatatt tcttgcttaa tccagttacc ctgacccttg acagataata tcatgttatc
     1981 tagactttct atattattta attttagcca ttttgattag ctttatctaa tcatttatag
     2041 atcataatag cctatagata accttaaaaa atatcgtctt gtttattgtt tgatgtctag
     2101 tagtaatgaa gctcatgtta taaaatttct tgaaccgaaa aatataccaa ttttgttaat
     2161 gataccactt tcactatttt gtagtattac tgttttcaat ccagtaacga taattaattc
     2221 ttatagccag gaagagacca ttaaactaac tgctattttt gctgaaccga aagaaagatg
     2281 ggatatactc attgaaaagg ctctagagaa attaaacgaa atacatcctg acaaaaaaat
     2341 ccaaattgaa tatagtgttc taccatattc agatacaagg acacaaattc ttacggctat
     2401 ggctggcaag tcagaattgg atcttgtttc acttgatcag atttggctgg gtgaatttgc
     2461 cgaagcagga tttctaacgg atataactga aaagacaaaa gtatggaata agtcttcaga
     2521 ctggtacgaa aataactggc ttggaggcat atataaagac aaagtatatg gaatatgggc
     2581 atggacagat gtcagagcat tatggtattg gaaagacctg ttgaatcagt ccggcttatc
     2641 atctgaaaaa ctaaaaacat gggatggata tctacaagga ttcaaaatat tgtcagaaag
     2701 actacctgat acgaatattc aaccaatcca tctaacgagt gcaaatcatg ttcctgatat
     2761 gtggtatccg tatttatgga tgttgggtgg taacatttta gaattaagag aaggtcatcc
     2821 atcaaaagga aattactggt ttccaacgta caatagtaaa cagggtgtaa tggcacttga
     2881 atttttaagg gatcaaatta acaccggtat taaacctcaa ataaaccatt tttggggtca
     2941 agagtttgca gataaaaaat ttgctgtaat gttagaagga tcctggattc taggtcattt
     3001 cccaaaagaa gaatggaaga atctgaaaga gaaaataggt ttgataacaa tgtttcctgt
     3061 tcctaataat acaactaaaa catctaccat gatgggagga tggctattta gcattcctga
     3121 aacttccaaa cataaagacc ttgcatggga attaatcact attatgttag atcctgatgt
     3181 tcttatgcct atgcttttga aagaaggtta tctgcctacg cagaagacca ttgcagaagg
     3241 aatttactcg aaagaaatga aatctactat tccatattat gaagatctga tttcacttat
     3301 tccttacgcc aaaggcagac ccaacattcc tgaatatcca caaattgcag atcacatacg
     3361 cacagcaatt gaggaagtct atcaaggagc tgacccgaaa cagtctcttg ataaggcagt
     3421 agaagattca atgaaagtgc taggatggaa gtagtgaaaa cgaaattcga attaaaataa
     3481 aaaccaatat taaactaacg tccataactt tttaaatatt tttgaactac gacattggaa
     3541 atgccaagta acagagcaac cattgaacca tatttatatc tgcttccaag cttactaatt
     3601 ctagtcgtat tcttattgtt tcctctaata tggaatattt atgtatcaat tcataatgtg
     3661 tcgattttga caattttaaa agact
//
LOCUS       DATIAS010000342         2992 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1560050, whole genome shotgun sequence.
ACCESSION   DATIAS010000342 DATIAS010000000
VERSION     DATIAS010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1560050"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..243)
                     /locus_tag="VLA74_06980"
     CDS             complement(100..243)
                     /locus_tag="VLA74_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50487.1"
                     /translation="MLSILTDTEKAVVETIRMRLSTEQALQYMKDNGFSISRATYFRA
                     LLI"
     gene            complement(621..1094)
                     /locus_tag="VLA74_06985"
     CDS             complement(621..1094)
                     /locus_tag="VLA74_06985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50488.1"
                     /translation="MIKEVDQYQRTRINKEIIEKASSLKIDIPAITEELLKNDKYNEN
                     YTKENVLQAYQEMFHKCKILLKKYEISPWSQFEIGKIDNGKDDEGIVEDSIYFNSQGH
                     FFSEYEDMSARHYQLEEIICVLHPIQQILTNLYLTLIRHAEFNKEKIKQLELEYV"
     gene            complement(1775..>2992)
                     /locus_tag="VLA74_06990"
     CDS             complement(1775..>2992)
                     /locus_tag="VLA74_06990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50489.1"
                     /translation="KRVVTWGWPVCIFCSARDESKWEIWPEIQSRCLITSPNMSLEKY
                     QESNLLTAQTMSLPYDIQQKVIVSEEEIELAKRCVLYLKQQILKFSIGEEEYQEQKNN
                     HLDLESRKKSNPVWIPYGQILGEVLPAEKGSDMRIQQRLFSLLNIIPLAKIESRQKLF
                     DGNQEMVITNLEDLAEVLQITQNISGIPSYKIKFYREIFLPLILSKNKKDEKDGKEEK
                     IIAVTTKELADYYKEKKGKAISTDNLRKTFLVELLNNDYIGELKSELDARQFIYYPLM
                     EFEDSEVMKINLKRESQENPDISKISNADQFDNYLHVSAIKLPKNCKNIPKDWLVYQI
                     LALARYRIDLDNFAGPLADYLNNHDNFQLLDSNGKRLKVKDFVTEYEKDFQLIRYFFK
                     PEFSNYYSKIFEI"
BASE COUNT          938 a          455 c          388 g         1211 t
ORIGIN      
        1 attacatgta caaaattgga tacaattttt tgtatctatg tataatgata caatagcaaa
       61 taataataat tattttgagt tagaggaggt gaatatatct taaattaaca gagccctaaa
      121 gtatgtagct cttgaaatag aaaagccatt atctttcata tattgtaaag cctgttctgt
      181 agataagcgc atcctgattg tctctacaac tgctttttca gtatcagtca atatgcttag
      241 cattagacta aaaatatcac cttatctact atgtaaaata tttgcctttt agattcaata
      301 aaaacaatat cgaatgcgct catattgata tacctattat cataatatag atatgtattc
      361 acgatataat tttaataagg aaaaggttag ctatattcat ttctgaaagg gtattattta
      421 cttttgtcac tcctaactaa ctttttaaaa aggtcctttt attattcata atttacttta
      481 taattcaatg tagaattgca aacacctctg ttgttttata tttgaataca atatctaact
      541 tcattttagt taataaaatt gtaatacgat agtatttgac cagtcaatgt tttactcatc
      601 atccagtaat aataagatca ttatacatat tctaattcta attgtttaat cttttccttg
      661 ttaaattctg catgtctaat taatgtcaaa taaaggttag taagtatttg ttgaattgga
      721 tgcaatacac atataatttc ttcaagttga taatgtctag cactcatatc ttcatattca
      781 gagaaaaagt gtccttgaga attgaaataa atgctgtctt ccactatacc ttcatcatct
      841 tttccattat ctattttccc tatttcaaat tgggaccaag gacttatttc atattttttt
      901 aatagtattt tgcatttatg gaacatctct tgatatgctt gtaaaacatt ctctttagtg
      961 tagttttcgt tatacttgtc attttttaat aattcctcag ttattgcagg aatatctatt
     1021 tttaggctac tagctttttc tatgatttct ttattaattc ttgtcctttg atattgatct
     1081 acttctttaa tcataatatg tgtatagtta tgagacatat ataaacctta tgaatttaat
     1141 tacatattaa gaataaaaaa catatgttaa aaagttaaat aagtattact atcacagtaa
     1201 agtttttgtt ccaaaatata atacttatat tgcaagttct ttgatttaca atttaaactt
     1261 ctattattat tttatgatta ttttatatct atttagagat acagtaattg ctttccagca
     1321 atacaatatg cagaaactaa tgaagaaaag atacttcttt tcaagaatga ttatctttgc
     1381 gtaaaatctt tttcagtgtt ataattttct catattaagt tttgagcgag atctatacta
     1441 tcgatcctcc tcaaaaaaga tcatgttatg atttttcttt ttctttgatt aatttatcta
     1501 tatccaattt ctgttctgac ttcattcttt ttgttactgt ggtatagatg tttcatcata
     1561 aaccatttat tatttttaga ttataattca taaaaatcaa cgatgagtat ttttatatct
     1621 attaatatta ttaataattt caggatcata attatagcca ccaattgaaa ggccagaatg
     1681 gtaaatcaat gggttgttaa gatatcgaaa ttatcgaatt tagaggaatt cgttaatttt
     1741 ttacaattat tatttatatt gttatgtaat agttttatat ctcgaatatt ttgctgtaat
     1801 aattagaaaa ttctggcttg aaaaaatatc gaatcaactg aaagtctttt tcgtattctg
     1861 taacaaaatc cttaactttc aacctttttc cattgctatc caataactga aagttatcat
     1921 ggttattcaa ataatctgct agaggaccag caaaattgtc aagatcaatt cgatatcttg
     1981 caagtgccaa tatttgataa actaaccaat cttttggaat atttttgcaa ttttttggaa
     2041 gttttatagc agaaacatgt aaataattat cgaattggtc tgcattcgat attttcgata
     2101 tatccggatt ttcttggctc tcccttttta ggttgatctt catcacttcg gaatcctcaa
     2161 actccattaa tggataatat atgaattgtc gagcatccag ttctgatttt aattcaccga
     2221 tataatcatt atttaacagt tctacgagaa atgtttttct tagattgtct gtagatatgg
     2281 cctttccttt tttctcctta taataatccg ctagctcttt tgtagttact gcaattatct
     2341 tctcttcttt cccatctttt tcatcttttt tatttttaga cagtattagt ggaagaaata
     2401 tctctctata aaatttgatt ttgtaggagg gaattccact aatattttga gttatctgta
     2461 aaacttctgc caagtcttct aaatttgtaa ttaccatttc ttgattacca tcgaataatt
     2521 tttgtctgga ttctatcttt gctaatggaa taatattcag tagagaaaat aatctttgtt
     2581 ggatgcgcat atcactacct ttttctgcag gtaacacttc gcctagtatc tggccataag
     2641 gaatccagac tggattagat ttttttctag attcaagatc taaatggtta tttttttgtt
     2701 cttgatattc ctcctctcct attgagaatt tgaggatttg ttgtttgaga tacaaaacac
     2761 atctctttgc caattcaatc tcttcttctg atacaataac cttctgctga atatcatatg
     2821 gaagactcat tgtttgagcg gtcaaaaggt tagattcttg atatttttca agagacatat
     2881 ttggggaggt aatcaaacat ctgctctgta tttccggcca tatttcccat tttgattcat
     2941 cccttgcgga acagaagata cagaccggcc atccccaggt gactactctc tt
//
LOCUS       DATIAS010000343         2675 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1970402, whole genome shotgun sequence.
ACCESSION   DATIAS010000343 DATIAS010000000
VERSION     DATIAS010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1970402"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            385..1335
                     /locus_tag="VLA74_06995"
     CDS             385..1335
                     /locus_tag="VLA74_06995"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF50490.1"
                     /translation="MGKDKEKEKESQERDVSYNPKPKSDILKEERSMDTKNNQDEEEI
                     KEKIIERMIDKNNNNTFNGSDTYTNRNTLSSIENRIIYDLQTLLSQRQERLWSVLHER
                     YQYNTSIKRGQDFLLNHVDSKLSLVVMYADLVGSTKMSMVLPVERMAKIIKAFSHELS
                     SVVESYNGFVLKYVGDAVIAFFTTGFNKYLSSDTAFQCAKSMINVIENGINPILEKDK
                     DDYPKLAVKIAIDEGENLVIQYGYDKSAPIDLIGYHMNVAAEIEESLTEPNKISVGNN
                     VYELLHPTVQSQFQEIQIKEYKWKYIDLETNLPYKVYTTN"
     gene            1795..2109
                     /locus_tag="VLA74_07000"
     CDS             1795..2109
                     /locus_tag="VLA74_07000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50491.1"
                     /translation="MNEIKVVIVGLIALVIVALSLWVLDEPEIIQDKEIEITIALGVG
                     LLILILDRRADRNIHEIIHQQHILVNQMHKKIDEQNELIKNLQKISSSSSHKDHVGNE
                     NS"
     gene            complement(2251..2388)
                     /locus_tag="VLA74_07005"
     CDS             complement(2251..2388)
                     /locus_tag="VLA74_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50492.1"
                     /translation="MKHGRRISDILQIGVMNMITQLLTEPMFLLNFNFLNTDSGVKIR
                     V"
BASE COUNT         1062 a          342 c          398 g          873 t
ORIGIN      
        1 ctgctgaatt tgtaacaata aaaaagaaga aaagtagaag tattaacact catcttgaaa
       61 acgaattgaa cagtaaggct gtatgtcaat ttgaatttta aaaagagtat tggctataac
      121 agaatcgttc tgataattta aaggatttta ccgaatctga acacacgtta ctatataagg
      181 taacatatga atatatataa tatgaagtat attacagaat ttagcaaatc tccactttct
      241 ataaacagtt cttagtattc tcatcacatg tgtatctatt aaggtgaatc aatccctata
      301 aaaatgaaag aaaaaaagtt atcttattat tttactgtta tcgaaataga taaattaaat
      361 aattacctga tttaattaag ttttttggga aaagataaag aaaaagaaaa agaaagtcaa
      421 gaaagagatg ttagttataa tcctaaacct aaaagtgaca tcctaaaaga agaaaggtca
      481 atggatacaa agaataatca agatgaggag gaaattaaag aaaagataat agaaagaatg
      541 attgataaaa ataataacaa tacatttaat ggtagtgata cgtacactaa tagaaatacc
      601 ttatcatcta ttgaaaatag aattatctat gatttacaaa cattattatc acaaagacaa
      661 gaaaggcttt ggagtgtttt acatgagcgt tatcaataca atacatcaat aaaaagagga
      721 caagattttc ttctcaatca tgttgattct aaactttctc ttgttgtaat gtacgctgat
      781 ttagtaggtt caacaaagat gagtatggtt ttaccagtcg aaagaatggc aaagataatc
      841 aaagcatttt ctcatgaact gtcttcagtt gttgaaagtt ataatggatt tgttttaaag
      901 tacgtaggag atgcggttat tgcgttcttc acaactggct ttaataagta tctatctagc
      961 gatactgcat ttcaatgtgc taaatcaatg attaacgtaa tagaaaatgg tattaatcca
     1021 atattagaaa aagataaaga tgattatcca aaattagctg ttaaaatagc aatagatgag
     1081 ggagagaatt tagttataca atatggatat gataaaagcg cacctattga tctgatagga
     1141 tatcatatga atgtagcagc agagatcgag gaatctctga ccgaaccaaa caaaatttct
     1201 gttggaaata atgtatatga attgttacat cctacagtac aatcacaatt tcaagaaata
     1261 cagataaaag aatacaaatg gaaatatatt gatctggaaa ctaatttgcc atacaaagtt
     1321 tatacaacga actaatattt gtttgtatgg gaacttgata ataaaattta ccggcaggat
     1381 attctcttat aagatattac tgcaatttta aatatatatg ttatatctta aaataaataa
     1441 tcaatttgtc ctaaattaac agaccactca caagtaatat attaaattaa tttaattaaa
     1501 ttaaagttct gaaaaaacag aagcaccagt tttatatcta ttatctgctt aaatttctga
     1561 ttatataagt ttctaacaat aaaagctaaa tacttattgt ttatatcata acattagtag
     1621 actcttattt tagaaccgct atcggtgtta ctcccgacgg gcccgtagtt ttctagggct
     1681 catctacttt tttagagatg tatatgcatc taaaaggatt atttttagag aaagttgaat
     1741 aacaatttca atgctaaaaa atgtaaataa tcctataaca accatttatc ttgaatgaat
     1801 gaaattaagg tagtcattgt tggactgata gcacttgtaa ttgttgcact atcgttatgg
     1861 gttttagatg aaccagaaat aatacaagac aaggaaatag agataacaat agcgttagga
     1921 gtaggattat tgatactaat tttagataga agagctgatc gtaatattca tgaaataatt
     1981 catcaacaac acatattggt taatcaaatg cataaaaaga ttgatgaaca aaatgagtta
     2041 attaagaatt tacaaaaaat atcatcatca tcaagccata aagaccatgt aggtaatgaa
     2101 aattcctagt aagattatta agtatacgtg atggtaaaga tactttatct ttctatggct
     2161 aactttatcc atagtaaaag tatatttata taacatacaa atatttagtt acataaaaac
     2221 taaatacaag atagtaataa tatttctaca ttagactctt atttttacac cgctatcggt
     2281 attcaagaaa ttaaaattta atagaaacat tggctctgtt aagagttgtg taatcatatt
     2341 cattactcct atttgtaaga tatcacttat ccttctacca tgtttcattg tattatacac
     2401 tcagctaaag ctctatctat cagaaataat tctcaaagag gcaaatggta gtttactata
     2461 attgccaatc tagtactgta catgacagtt aagttaacgc gtaaaagcta tgactaagaa
     2521 cactttatct attatatgaa aattaaattt gaaagaaata gaacatcaac ctttattgta
     2581 atgtattctc tttatcttta ctttcttggt ttaagtttgc gtaatacatc taaagcgtta
     2641 ataattttca aggaagaaag aaagagttac gtctc
//
LOCUS       DATIAS010000344         2056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1696840, whole genome shotgun sequence.
ACCESSION   DATIAS010000344 DATIAS010000000
VERSION     DATIAS010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1696840"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VLA74_07010"
     CDS             <1..405
                     /locus_tag="VLA74_07010"
                     /inference="COORDINATES: protein motif:HMM:NF025113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50493.1"
                     /translation="LLDFDVIDNWDTELEKMNKDKKGRKFVYPDSFIKLLGYMRAYFH
                     LPYRQTEGVVREHASNTLPSIPDYSRICRRINRLDIKINDDDDDKTSLQHADNFVIAI
                     DSTTGVKVTNRGEWIRHKWNVKRGYLKIHVAV"
     gene            345..758
                     /locus_tag="VLA74_07015"
     CDS             345..758
                     /locus_tag="VLA74_07015"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50494.1"
                     /translation="MDKTQVECQERLSKDTCCCVDIKRKRILSLHVTSSEQVHDGKVL
                     PELVDDITIKQNKEIDMTIADGAYDSNNNFQILSFKGIQPAIKVRKNSRCKKTNHYLR
                     NKTVKMQKEDIDKWKDNVCYGQRWIVETIFSSIVV"
BASE COUNT          810 a          256 c          318 g          672 t
ORIGIN      
        1 ttacttgatt ttgatgttat agataactgg gatactgaac tagagaagat gaacaaagat
       61 aagaagggta gaaaattcgt atatccagat tcattcataa aattattagg ttacatgaga
      121 gcatattttc atttaccata cagacagaca gaaggagtag tacgagaaca tgcttcaaac
      181 acactaccat caattccaga ttatagcagg atctgtagaa gaataaacag attggatatc
      241 aaaataaacg atgatgatga tgacaaaact agtttacaac atgctgataa ttttgtaatt
      301 gcaattgatt ctactactgg tgttaaagtt acaaacagag gggaatggat aagacacaag
      361 tggaatgtca agagaggcta tctaaagata catgttgctg tgtagatatc aaacgaaaga
      421 gaattttatc attacatgta accagcagtg agcaagtaca tgatggaaaa gtacttccag
      481 aattagtaga tgacataaca ataaagcaga ataaggaaat agatatgact atagcagatg
      541 gtgcctatga cagtaacaat aattttcaga tattgtcatt taaaggcata caaccagcaa
      601 taaaggttag aaagaattcc agatgtaaaa agactaacca ctatctcaga aacaagactg
      661 tcaaaatgca gaaagaggac attgataaat ggaaggataa cgtatgctat ggtcagagat
      721 ggattgtaga aactatcttc tccagtatcg ttgtataatt ggtttcaaac tataactatc
      781 aaatgattac gtcctgaata ggaataaaaa acatcattca aataagttag gcgacaaagc
      841 agatattaat ctattctatg ggtatttcta ttgagttatt atatcttcta acgaattcaa
      901 aatcaataag tttctaataa taaaagctaa atacaaggta gtagcagttg agccatacta
      961 catggaagat tctactcccg acagcttgtt ggatatatgt agatgaatcc tcattgttat
     1021 ggatgaatcc gattaatatc attttgtagc ctttattaat tatcaaatta tattatagag
     1081 ttaataatac tctattgtag ttatgtcaca tacataaata gtagatagat ttaaaagaaa
     1141 attataataa aaaaaattta taaatttaaa agcatacttt aagataaatt cactgatatt
     1201 ttgaatacta tcgatagcag tacaaaaata agaatttgat gtatgttata ataataagga
     1261 agataatatt taagattaat gattagaaaa gctataagat gaccaaccta attgcataga
     1321 catttatgaa aagtgataaa atataattaa atatcgaatc actattagtt actatattga
     1381 atcgtttttt ctcgtggcta ttctatttac cctttataat attttttata atatttttta
     1441 caattttctt ttctgatttt ttaataaatc ttgtagtgaa cctttttata gacaacaatt
     1501 tcttgttgat aaaaatgata gcgccagtat ggaaataaga tagaagaatc ttccatgagg
     1561 tagtgttcta ctgtgaacaa cctgtatcta ccttttatta ttagaaattt aatttaaaat
     1621 cattattaaa atgatatgat gtaaaaaagt tataataatc atggattact atcatattag
     1681 taaatactca atagaaatct aattttacta taaaagataa gccaaaattt atttattgga
     1741 aatgtacatt tattataatc accgaataat tactactata accacaatct atttttatcc
     1801 tgtcttatag tgtatgtata ataagagaaa aaatgaattc aaagagaaag agaatataac
     1861 aataattgtg ataatagcaa tttatctata aaatggacta atcgatttat ctatactgcc
     1921 attattcaag gagcaatcat cgttggatta acaatttttc tcatttttag tcaaatatcc
     1981 tttctaaaac cagaaatttc aagagtaatt gcagctggag gtgcaggaac ctggtttact
     2041 tttggttata ttatgt
//
LOCUS       DATIAS010000345         4185 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_743806, whole genome shotgun sequence.
ACCESSION   DATIAS010000345 DATIAS010000000
VERSION     DATIAS010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4185
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743806"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..1592
                     /locus_tag="VLA74_07020"
     CDS             210..1592
                     /locus_tag="VLA74_07020"
                     /inference="COORDINATES: protein motif:HMM:NF020078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Ile)(2)-agmatinylcytidine synthase"
                     /protein_id="HSF50495.1"
                     /translation="MMYKSTNAYNNILHIGFDDTDSRSGRCTTYLAFKILSNLKRNQS
                     IKFLDYPLLIRLNPNIPWKTRGNGAVCIRLTTRNSKDIERITEYIKNEIEQNSDIGIG
                     ANPGLVFFEGRKIPDEIIEFNRIAMFDILSKQKAIKIAEKNKMKFFCYGNGQGLVGAT
                     AAIGCLLDSDYTFEVIAYRKIENCQTPRKIDSIKVIYLDRSTFPSTFNCYDHVHERIL
                     ITPHGPDPVFCGIRGEDPEIVLEGLKMLKIVEKLEGYLIYRSNQGTGMHLINEIKLGD
                     VKAYTAGISRCRVTTNPYTMQGGHVFFTVEDDSKNSCLAAVYEPTGLTKVAAQLQKGD
                     LIEIGFGVRKATIKHPTVLNLEYISILETIQIYELVNPSCVNCGKRMKSEGKEKGFQC
                     KRCKTLDRYGKKVPLLNPRSIKEGLYVPTPKAHRHLTKPRHRYGMEKKGWDISKNNIF
                     PKWFGNIDNI"
     gene            complement(1598..1720)
                     /locus_tag="VLA74_07025"
     tRNA            complement(join(1598..1618,1651..1685,1702..1720))
                     /locus_tag="VLA74_07025"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1667..1669),aa:Met,seq:cat)
     gene            complement(1924..2043)
                     /locus_tag="VLA74_07030"
     tRNA            complement(join(1924..1968,1983..1989,2011..2043))
                     /locus_tag="VLA74_07030"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1984..1986),aa:Leu,seq:cag)
     gene            complement(2493..3158)
                     /locus_tag="VLA74_07035"
     CDS             complement(2493..3158)
                     /locus_tag="VLA74_07035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-6"
                     /protein_id="HSF50496.1"
                     /translation="MGIYKYSFYRSPNIGIFVKCNDISIMLPLGFASTKSDTLVKYLE
                     ISEPTYISIAGTRLLGPMMVMNNHGILVSSIASDEEINIIRKKSKLNVERLESKYTAI
                     GNLIAANDHGAIISPLCSDVMEQVHNVLDVPVNPISVCGFVQTGSMVVTTNKGAVIHP
                     SASEEEIKSISDILNVNVEPVTINGGIPYPASGIIANSKSIIVGNLTTGPELIMLSRA
                     FNV"
     gene            complement(3251..3637)
                     /locus_tag="VLA74_07040"
     CDS             complement(3251..3637)
                     /locus_tag="VLA74_07040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50497.1"
                     /translation="MKSFAISEQKFEIAIDYAHFISPLNQDNQVKVLLKYLQSNIKDI
                     TEINNKSINAIMKVYSTNGTLLKTSSFPDGFVYNSSQPVQLATNIVDNSITSINATLQ
                     ITNFEKTQSLSNPVTINLNLGDIVDK"
     gene            complement(3837..3974)
                     /locus_tag="VLA74_07045"
     CDS             complement(3837..3974)
                     /locus_tag="VLA74_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50498.1"
                     /translation="MTEMKGKELIDVKENNNNNEIELIFKEGKYIIRIIDDKFSVIHE
                     T"
BASE COUNT         1528 a          560 c          641 g         1456 t
ORIGIN      
        1 tctattattt ttaaagacat atcttgtaat gttatttttt agatataaaa aagtaatcgt
       61 aaaagtagta agcgtaaagg taatcatcat acaaatttac agatttcaca aatattgaat
      121 atttgcaata tattaataaa ttcgttctaa aatgaatttg gagaaaaatt aaacattctt
      181 taatataagg atagaagaat ctaaaaaaga tgatgtataa aagtacaaat gcatataata
      241 atattctcca tattggtttt gatgacacag attctagatc tggtagatgt acaacttact
      301 tagcttttaa aatattatcg aatttaaaaa gaaatcaatc tataaaattt ttagattatc
      361 cattgttaat cagattaaat ccaaatatac cttggaaaac tcgcggtaat ggtgctgtct
      421 gtatcagatt gacaactaga aatagcaaag atattgaaag gataacagaa tatatcaaaa
      481 atgagataga acaaaattct gacataggaa taggggctaa tcctggtctt gttttttttg
      541 aaggaagaaa gattccagat gaaattatag aatttaatag aattgcaatg tttgatatct
      601 taagtaaaca aaaagcaatc aaaattgctg aaaagaataa gatgaaattt ttctgttatg
      661 gaaatggaca aggattagtt ggcgcaacag ctgcaattgg atgcttgtta gattcagatt
      721 atacatttga agtaatagca tatagaaaaa tagagaattg tcaaactcca agaaagatcg
      781 attcgataaa ggttatttat cttgaccgtt ctacatttcc gtcaactttt aattgctatg
      841 atcatgtcca tgaacgaata ttgattaccc cacatggacc agatccggtt ttctgtggga
      901 taagaggaga agatcctgaa attgtattag agggattaaa gatgttgaaa atagtagaaa
      961 aattagaagg ctatctgatt tatagatcta accaaggaac agggatgcat ttaataaatg
     1021 aaatcaaatt aggtgatgtt aaggcgtata cagcaggtat ttctagatgt agagtgacaa
     1081 caaatcctta cactatgcaa ggaggtcatg tattttttac ggtagaagat gattcaaaga
     1141 atagttgtct ggcagcagtg tatgagccaa ctggattaac aaaagttgct gcacaattac
     1201 agaaaggcga tttaatagaa attggttttg gagtaaggaa agcaaccatc aaacatccaa
     1261 cggtattaaa cctagaatac atctcaatat tggaaactat tcaaatttat gaattagtta
     1321 atcctagttg tgtaaattgt ggaaaaagaa tgaaatctga aggaaaggaa aaaggttttc
     1381 agtgtaaaag atgtaaaact ttagacaggt atggaaaaaa agtaccttta ttaaatccac
     1441 gatcaattaa agaaggttta tatgttccaa ccccaaaggc acatagacat ttgactaaac
     1501 ctagacacag atatgggatg gaaaaaaaag gatgggatat atcaaagaat aatatttttc
     1561 caaaatggtt tggaaatatt gataatattt aaataagtag cggggggttg atttgaactt
     1621 acggccacca acattatcga ttttggcgga aaccgctctg cgggttatga gcccgccggg
     1681 ataactttgc ctattaaata tctggcttcc ccaccccgct gaatcatttt tgtattttac
     1741 aactatatat ctctgtctat ttagtttata aaattttttt tttaaataat atactttttt
     1801 tacattaata acacaaaaat ttaagaaaat aatttttatt ttttattttc aagaaatttt
     1861 taacaaatat tgtatttata gttaaaagat tactgaaaaa gatacaatta ataaaacaaa
     1921 agatgcggga ggtgggattt gaacccacga acccctaaga gatgaggttt ctaagccatg
     1981 cttctgagca tcgtgttaga tgaaaataat ctcacgcctt tgaccaagct tggcaactcc
     2041 cgcttcgagt aggaacaata tctaagaagt caaataatag ttttttttat tataaaataa
     2101 tacaaaaatt gagtttaatg aaatatatct aataaaaact aaatttatta tcctatgatg
     2161 gtattcctac aacattagat gcaatttgtt tgccaaacag cctccttatg gctggcaaaa
     2221 tagtttatgt ttgttatgta catgttacac aatcttcttg taatcatatt tcatcttcta
     2281 tctttctgtc tcttattttg ctgtatctcc catgagtttt tcgtactcag gtacaagaca
     2341 tatctccttg tatcgtttaa acacaattca aaataacata ttcatcttgc tattatacca
     2401 aaagagcaaa atgacgaaaa aaaatatact aaattatcta ttgtggatgt aataaaagac
     2461 aaaaatagcg aaattttagt tagttactct agttatacgt taaacgctct acttaacatt
     2521 attaattctg gtccagttgt taaatttcca actataatag atttagaatt agcaataatc
     2581 cctgatgccg gatatggtat acctccatta attgttactg gttctacatt gacatttaaa
     2641 atatcagata tagattttat ttcttcttca ctggcactag gatgaataac tgcaccttta
     2701 tttgtagtaa caaccatcga tccagtttgt acaaaaccac agacacttat aggattcact
     2761 ggaacatcca atacattgtg tacttgttcc ataacgtcag aacacaatgg agatataatt
     2821 gctccatgat cattggcagc tattaaattt cctattgccg tatatttact ctctaaacgt
     2881 tcaacattta atttactttt ttttcttata atattaattt cttcatcaga agctatcgaa
     2941 gaaactaaaa ttccatggtt attcatgacc atcataggtc ccaataatct tgttcctgct
     3001 atagaaatgt aagttggctc agatatttca agatatttca ccaacgtatc agattttgtt
     3061 gaagcaaatc ctaatggtaa cattattgaa atgtcgttac attttacaaa aattcctata
     3121 ttaggacttc tgtaaaaaga atatttgtaa attcccaaga tataacactg ttaattataa
     3181 tgtatgaata tgaacttttg gaaaagtgtt acttatcgct atcgaattgg aattgttaca
     3241 aaaaatatta ttatttatct acgatatctc cgagattaag atttattgtt actggattag
     3301 atagggattg tgttttttcg aagtttgtaa tttgtaatgt agcattaatt gatgttattg
     3361 aattgtcaac tatattagtt gcaagctgta caggttgcga cgaattatag acaaacccat
     3421 cgggaaaaga ggatgttttt aataatgtac cattagttga atacactttc attattgcat
     3481 ttatagattt attatttatt tcggtaatat ctttaatatt gctttgaaga tattttaata
     3541 gaacttttac ttggttatct tggtttaaag gtgaaataaa atgagcataa tctatcgcaa
     3601 tttcaaattt ctgctctgat attgcaaatg atttcattaa tatatcattt agattaatag
     3661 ggaaaaatgc aaatgaaaaa taacataaca atattaataa aaaaacttta gatttcattt
     3721 attaatccga ttatttgatt aagataattt agaataatat ctatgttaat ttaacttgac
     3781 aaaaaagata taattagtta ttaaaaacat aaattttcaa taattatctt gttgaatcat
     3841 gtttcatgaa ttactgaaaa tttatcatcg attattctta taatatattt accttctttg
     3901 aatatgagct ctatttcatt attattatta ttttctttta cgtctatgag ttcttttcct
     3961 ttcatttcag tcaattctat catatatcta taaaaagaaa actaatattt agattaattg
     4021 aaattaattt ataattagag taatattgaa cgttcatgtt atatggattt agtagatgtt
     4081 agctatcgaa gctcaggatg tttcaaagat ttataaagga gtagatgtac ctgctttaga
     4141 tagaatctca ctacaagtag aacaaggaca gatttttaca ttatt
//
LOCUS       DATIAS010000346         2547 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1153599, whole genome shotgun sequence.
ACCESSION   DATIAS010000346 DATIAS010000000
VERSION     DATIAS010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153599"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1485)
                     /locus_tag="VLA74_07050"
     CDS             complement(<1..1485)
                     /locus_tag="VLA74_07050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50499.1"
                     /translation="MKSMYIQYDDISDPIKFVIDTALKEAKKEGRLTNQLLITKLSAY
                     SNNPINLLINAPSGVGKNYVINTVASFFPQSDILSLAGMTDKALFHRAGKLVIKNEIT
                     GEYESIEERINDLDEQIDDKEYEISKSNNKNLKQGLKSIVKKLEREKKNLLKDARKLI
                     DLSNKIIIFLDTPSEQLLSGLLPLLSHDRYEIEYEFTDTHNGIQTRNNVLRGWPAVII
                     AQALDYSHSPRFPEYQRRFITTNPTMSTEKFNEAVNLISNKFSNPDLIYQHDIVSYEE
                     KDKARIIVKGLKEQIQDIYRDVKPGKNNVIIPFSDLILDSLPKEKAEDMTRANRFYTY
                     LSFLPVVNFHKRPRITIVKKGDTNIQTIPIATFEDLQNTVSLMEYSDGIRPYILEWFN
                     EVFRKAFEDKGNVKDSKTDSKGEKLEETIVAVTSQDLIRKHKEKHNETLTSHKLLQSY
                     LYPLMNHGYIDSIDSVIDKRAKIYYPLIETKKYINLFYSQEKNNS"
     gene            complement(1495..1761)
                     /locus_tag="VLA74_07055"
     CDS             complement(1495..1761)
                     /locus_tag="VLA74_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50500.1"
                     /translation="MTEPGNSSQFANNHSSPQAETQTMQDEADIRNSSYSKVKNFTSV
                     ETNDNITREELKSVQKSIALLKQDIRKIFHEELFKFLNQKQQQQ"
     gene            complement(1765..1971)
                     /locus_tag="VLA74_07060"
     CDS             complement(1765..1971)
                     /locus_tag="VLA74_07060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50501.1"
                     /translation="MSYEIDTKLEKKVEISKRLTTIAISKENYFILQRMGFAGESFND
                     VLDRILKNNSNLLESHSIESEVKK"
     gene            complement(2367..2501)
                     /locus_tag="VLA74_07065"
     CDS             complement(2367..2501)
                     /locus_tag="VLA74_07065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50502.1"
                     /translation="MREILPSESKQQSKIRDQSSKFAALAPQKNSALEEFGQQKVNSR
                     "
BASE COUNT          733 a          406 c          347 g         1061 t
ORIGIN      
        1 agaattattc ttttcttgtg aatagaataa attaatatat tttttcgttt ctataagagg
       61 gtaatatatc tttgctcttt tatcgataac actatcaata ctatctatgt aaccatggtt
      121 cattaatgga tatagatatg actgcaagag tttgtgactg gttagagttt cattatgttt
      181 ttccttgtgt tttctaatca gatcttgaga agttactgct actatagttt cttcaagttt
      241 ttcgcccttg ctatctgtct ttgagtcttt tacatttcct ttatcttcaa acgctttacg
      301 aaatacttca ttaaaccatt ccaagatata gggcctaatt ccatctgaat actccatcaa
      361 tgatactgta ttttgtaaat cttcaaaagt tgcaatagga atagtttgta tatttgtatc
      421 tccttttttt acaatggtaa ttcttggcct tttatgaaaa tttactactg gcagaaaaga
      481 tagataggtg tagaatctat tagcccttgt catatcttct gccttctctt tgggaagtga
      541 atccaatatc aagtcactaa atggaataat aacattattt ttacctggtt ttacatctct
      601 ataaatatct tgtatttgtt cttttagacc tttgacaatt attcttgctt tatccttttc
      661 ttcataactc actatatcat gctgataaat aagatcagga tttgaaaatt tgttagagat
      721 taaatttact gcttcattaa atttttcagt agacattgtt ggatttgtgg ttatgaatct
      781 acgctgatat tctggaaatc gtggagaatg gctataatcc aatgcttgtg caattatgac
      841 agcaggccaa cctctcaaca cattatttct tgtctgtatg ccattatgag tatcagtgaa
      901 ttcatattct atctcatatc tgtcatggct taacaaaggt aacaagcctg aaagcaattg
      961 ttctgatgga gtatctaaaa atattattat tttgtttgat aaatcaatca gtttccttgc
     1021 atcttttaaa agatttttct tttctctttc aagtttttta acaatactct tcaaaccttg
     1081 ctttaaattt ttattatttg acttagatat ctcatattct ttatcatcta tttgttcatc
     1141 aagatcatta atcctttctt ctattgattc gtattctccg gttatttcat tttttattac
     1201 caatttccca gcacgatgaa atagtgcttt atctgtcatt cctgccaaag atagtatatc
     1261 tgattgagga aagaaagatg caacagtatt aattacataa ttcttgccta ctccacttgg
     1321 tgcattaatt aataaattaa taggattatt actataagca gataactttg taattaacag
     1381 ttggtttgtt aatcttccct ctttttttgc ttcctttaaa gcagtatcta ttacaaattt
     1441 aattggatca gaaatatcat catattgaat atacatactt ttcatatatc acctctattg
     1501 ttgttgttgt ttttgattca ggaacttgaa caattcctca tgaaaaattt tcctgatgtc
     1561 ttgtttaagt aatgctattg atttttgaac agattttagt tcttccctag tgatattatc
     1621 attagtttcc acagaggtaa agtttttaac tttggaatat gaagaatttc taatatctgc
     1681 ttcatcctgc attgtttgtg tttctgcttg ggggcttgag tggttattgg cgaactgact
     1741 cgaattcccg ggctcagtca ttttttattt tttcacctca ctctcaatcg aatgtgactc
     1801 taacaagtta ctattgtttt ttaggatcct gtctaataca tcgttgaaac tctccccagc
     1861 aaaacccatt ctctgaagaa taaaataatt ttcttttgaa atggctattg tcgtcagtct
     1921 ctttgatatt tctactttct tttctaattt agtgtctatt tcataactca tttaagtatt
     1981 aaatatattc taaataattt aagacaatag gtattaatat tatgtaaatc aacatcattt
     2041 tttttgatga ttctaaacta atttcaatta ctgtttaaaa aaatattctt tattttgtca
     2101 agtcacaaat ataatataaa actttgatcc aattgtttct tgtggcattg caaaagttga
     2161 atcatcatta ctataccaat taagataagt attcttactc atttctaact aaagattttc
     2221 taaattctta tttttgataa tattgtaatt ttgtaatgaa atgagcacat ttatgcgtgt
     2281 tatactatct aaatttacga ttatctaaaa tatatactgc taatgttaat ttaatgtcag
     2341 tgtatttata ttaattggta taggttctac ctgctgttta ccttttgttg cccaaattct
     2401 tcaagtgcgc tatttttttg cggcgccagc gccgcaaatt tactgctttg atctctgatc
     2461 tttgattgtt gttttgattc tgacggtaaa atttctctca tctatctttt tgagaaaact
     2521 atcggttctt tgagaatatc gtgtgct
//
LOCUS       DATIAS010000347         3605 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1834970, whole genome shotgun sequence.
ACCESSION   DATIAS010000347 DATIAS010000000
VERSION     DATIAS010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1834970"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            429..3077
                     /locus_tag="VLA74_07070"
     CDS             429..3077
                     /locus_tag="VLA74_07070"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSF50503.1"
                     /translation="MIIDWSMESVNLKANNIRDASPEQIAINYPPSLYFKIDQMWLTI
                     EPDFKTKRITGKQQLKITTLQDLEIIELDCAFNEKHKIQIDSIFYSDGAASVNGNKML
                     DYHQSNDKLAIEIGEKLLEDSKFYLIINYETNGTDPPDGFVFVDSPESIAFQAWTQGE
                     AIASKKWFPCIDHPQVKFPRELSIIVPENFIVISNGEREILDTYVNGEGKTKYVWEET
                     HPNTSYVTSIVIGDFAQLPKENYDGRVPLLYYVPHGREDDGVRLFKNTSKMMKFFESF
                     LQTKYPYDKYTQVTVEDFDYGGMENTTCTTLTTRILPDEKTVRDSNTFDYVIVHELAH
                     HWFGDLVTCRDWQHIWLNESFTSYCEALYYQNAFGDDEFYNYMLGKANAYLNHSEVDK
                     VHKIPLVTKKYNNPLEMFIPPERTYEKGAWIVHMLRCLLGDEDFKKSLKIYLDSFKFK
                     TAETDNIRQIFEQVSGVSLQKFFDQWIYQAGHPELNAIFSVNNSKINLKIQQTQDYEF
                     EFPLEILIVYQTDNGLEEKLKDTIIISSKETEKTWTIPNGSLVKRIVIDPHYKILSKL
                     NLAIQDPNNSILLNSLINGETFIEKIRAASALKNRSSPDLIDPLKNLILQENIHWGIR
                     VEATKILESIKIEASYQTLIECLKKIQSNKVKESIVTAVGSFSKTDSFDVLKSIIENE
                     DESDSVRYTTAISIAESENEEKTFPILTKLLEKKSYKNIVARGAIEGLKIIALESSKK
                     EKIDDVESILLEKSKIGNDARIRQISTSALGYLARYYRDRTNIVDNLKNLLNDKSIHI
                     RNTAYAALGNAFEYSQNQNIIKRLNENIKSEDNEFVKQTAETSITMIKKDGSLSTSLI
                     SEKSSLKDRKYKSKIIEDMEKHIALH"
     gene            complement(3254..>3605)
                     /locus_tag="VLA74_07075"
     CDS             complement(3254..>3605)
                     /locus_tag="VLA74_07075"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50504.1"
                     /translation="QYDWFDENTFLDYLKQIHRKFPKCYLFLDKAKQHYKSQKVLRYF
                     DKHKQDLIPIYLPTASPAEFMVLEEIWHIAKNDLLVLQYYSSFTDFIDKISIYFRTKR
                     FRLNMKNYLLGCVS"
BASE COUNT         1396 a          474 c          555 g         1180 t
ORIGIN      
        1 aagatactct atgtttgtta aagcatacaa tgaagaaaga gaacacatgg tggtatcaat
       61 ggtcacacac catctgaaat gttcctttct aaaggaagat taaataatca taatagtaac
      121 aagagagtca agcagataaa agaaagtgtt acccatgtta gtaagtgaat ctgttacctg
      181 tctatgtaag tacaacacat aatttttgat ataattataa tgagaaacaa tattgtgaca
      241 aattaattgt cattagtcaa cttttgataa ttttgtatta attatatatt tacaagaata
      301 atttttcgac gtcgcaaaat taattgaact ttaattagat ttaatattaa ctaaagtaaa
      361 atgctattta tttttaatat tatcaatttt tattttctat ttctatacca taatatttat
      421 caataagatt gattattgac tggtcaatgg aaagtgtcaa tttaaaggcg aataatataa
      481 gagatgcctc acctgaacag attgcaataa actatcctcc ttctctatat tttaagattg
      541 atcaaatgtg gcttacaatt gaacctgatt ttaaaacaaa aagaataact ggaaaacaac
      601 agttaaagat aactacatta caagacttgg aaataattga acttgattgc gcttttaatg
      661 aaaaacacaa gatccaaatt gattctattt tttattctga tggtgctgcc tctgttaatg
      721 gtaataaaat gctcgattat caccaatcca atgacaaatt agcaatagaa attggtgaaa
      781 agttattaga agatagcaaa ttttatttaa ttataaatta tgagacaaat ggaacagatc
      841 cacctgatgg ttttgttttt gtagactctc ctgaatcaat agcttttcaa gcttggacac
      901 aaggtgaagc tatagcatct aaaaaatggt ttccctgtat tgatcaccct caagttaaat
      961 ttcccagaga attatcaata atagttccag aaaattttat tgtaatctct aatggtgaaa
     1021 gagagatact ggatacatat gttaatggag aaggaaaaac gaaatatgta tgggaggaaa
     1081 cacatcctaa tacttcttat gttacttcca tagtaatagg agactttgcc caacttccaa
     1141 aagaaaatta tgatggaaga gttcctttat tatattatgt tcctcatgga agggaggatg
     1201 atggagttag actttttaaa aatacttcaa aaatgatgaa attttttgaa tcttttttgc
     1261 aaacaaaata tccatatgac aaatatactc aggttactgt tgaagatttt gattatggtg
     1321 gaatggaaaa taccacctgt actaccttga caacaagaat attgcctgat gagaagacag
     1381 ttcgagattc aaatacattt gattatgtta ttgtacatga acttgctcat cactggtttg
     1441 gtgatttggt aacttgcaga gattggcagc acatttggct taatgaatcc tttacatcat
     1501 attgtgaagc actatattat caaaatgctt ttggagatga tgaattttat aattatatgt
     1561 tagggaaagc aaatgcatat cttaatcata gtgaagtaga taaagttcac aaaattcctt
     1621 tggtgactaa aaaatataac aatccattgg aaatgtttat tcctccagaa cgaacctatg
     1681 aaaaaggagc atggattgta catatgctga gatgtttgtt aggagatgag gattttaaaa
     1741 agtctttaaa aatatatctt gattccttta aatttaaaac agctgaaact gacaatatta
     1801 gacaaatatt tgaacaagtt tctggagtaa gtttacaaaa atttttcgat caatggatat
     1861 atcaagcagg acatccagaa ttaaatgcga tattctcagt taacaattca aaaataaatc
     1921 tcaagattca gcaaacccaa gattatgaat ttgaatttcc acttgaaatt cttatagtat
     1981 accaaacaga taatggttta gaagagaaac taaaagatac aattattata tcaagtaaag
     2041 aaacggaaaa aacttggacc attccaaatg gatcacttgt taaaagaatt gttatagatc
     2101 cacattataa aatattgtcg aaattgaatt tggcgattca agatcctaat aattctattc
     2161 ttttgaatag tctaataaat ggagaaactt ttatagaaaa aatacgcgca gccagcgctt
     2221 taaaaaatag atcttctcca gatttgattg atcctttgaa aaatttaatt ctacaagaga
     2281 atatacattg gggtataaga gtagaagcta caaaaatcct tgaatcaata aaaattgaag
     2341 catcatatca aacattgatc gaatgtctta aaaagattca aagtaataaa gtaaaagaat
     2401 caattgtaac agcagtagga tcattttcta aaactgattc atttgatgta ttaaagtcaa
     2461 ttatagaaaa tgaagatgaa agtgattctg ttagatatac tacggcaatt tcaatagctg
     2521 aaagtgagaa tgaagaaaaa acatttccta ttcttacaaa gttattagaa aaaaaatcgt
     2581 acaaaaatat tgttgctcgg ggagctattg aaggattaaa gataattgca ttggaatcat
     2641 ctaaaaaaga aaaaatagat gatgttgaat ccatattatt agagaagagc aaaatcggaa
     2701 atgatgcaag aattcgacaa atttcaacat cagcattagg atatttggcc agatattata
     2761 gagacaggac aaatattgtg gataatttaa aaaatttatt aaatgataaa tcgatccata
     2821 taagaaatac agcttacgca gcacttggta atgcctttga atatagtcaa aatcaaaata
     2881 ttataaagag attgaatgaa aatataaaaa gtgaggataa tgaatttgta aaacagacag
     2941 cagagacgtc tataaccatg ataaaaaagg acggatccct ttcaactagt ttaatatctg
     3001 aaaagtcctc gttaaaagat agaaaataca aatcaaagat tattgaagat atggaaaaac
     3061 atatagctct acattaattt ccttaaacaa ttaactaata aaactactaa tataatacat
     3121 atgatattat ataacaagta taagttaaat tcctatttta ttaattatta tttattatta
     3181 caattataac atctatttta tctggatttc agagtttacc cattatttta tattgtatac
     3241 cacctagcat atgttagctg acacatccta acagatagtt tttcatattc agacggaatc
     3301 tttttgttct aaaatatata gatattttat ctataaaatc tgtaaatgat gaataatatt
     3361 gtagaacaag caaatcattt tttgctatgt gccatatttc ttccagtacc ataaattcag
     3421 caggagacgc tgttggaaga tatattggaa tcagatcctg tttgtgttta tcaaaatatc
     3481 tcagtacctt ctgtgattta tagtgctgtt ttgctttatc caggaacagg taacattttg
     3541 gaaatttcct gtgtatctgt tttagataat ctaaaaatgt gttttcatca aaccagtcat
     3601 actgt
//
LOCUS       DATIAS010000348         3155 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_608893, whole genome shotgun sequence.
ACCESSION   DATIAS010000348 DATIAS010000000
VERSION     DATIAS010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3155
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_608893"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1380
                     /locus_tag="VLA74_07080"
     CDS             <1..1380
                     /locus_tag="VLA74_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine(34) 5-carboxymethylaminomethyl
                     modification radical SAM/GNAT enzyme Elp3"
                     /protein_id="HSF50505.1"
                     /translation="SGVAVIAVMPKPYACPHGKCIYCPGGIEYNTPMSYVGTEPATKI
                     AQSFEYDAYYQVKSKLSQLYQRGHNVSKIELVIVGGTFPFMPEIYQREFVKKCFDALN
                     NDISSTLEESIIKNEYAEIRCVGFTVETKPDYCKEQHVDLMLKLGITRIEIGVQTLEE
                     NIYKLINRGHNLTDVKNSFQIARDCGYKIVAHMMPGLPGSTTESDINSFKLLLENDSF
                     KPDMLKIYPTLVLKNTGIYKMYMNGKYHAYTEDELVNILVEVKKIIPPWVRIMRIQRE
                     IEPSDIIAGSKKGNIRQIAMKKLKELGTKCKCIRCREAGLQKLKNFNQQEIILNRIDY
                     FASRGKEVFLSMESKDKSLLFGFLRLRNIPFSHRKELNDNNNKRNSAIIRELHVYGQV
                     VDVGQKNNSLSFQHNGLGLHLIEEAEKISKEEFQIDKLSVISAIGTRAYYKKLGYIQN
                     GPYVTKQLK"
     gene            2129..>3155
                     /locus_tag="VLA74_07085"
     CDS             2129..>3155
                     /locus_tag="VLA74_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HSF50506.1"
                     /translation="MIEKIIGKGTWIDKVANTIILREKKLNRNLDIIRVESGLGASGI
                     PHIGSMGDAVRAYGIGLSLKYQGYNSELIAYSDDMDGLRKIPTGFPSWLQDHIAKPVS
                     NIPDPFGDCHSSYGSHMSSLLLDGLDKTDIKYIFKSAREVYKSGILIDAIDQILTKSE
                     YLGQKISEFVGQDKFLNVLPYFPICKECGKLYVAHAKEYLTTEKKVLYECSGSKIGNR
                     EIKGCGYKGEAHIGKDEGKLAWKVEFAARWKILDIRFEAYGKDIMDSVKINDWVCEEI
                     LKFPHPLHIKYEMFLDKGGKKISKSAGNVLTPQMWMKYGTPQSILLLLFKRITGTRHI
                     GIDDIPSL"
BASE COUNT         1238 a          365 c          534 g         1018 t
ORIGIN      
        1 tctggggttg cagtaattgc agttatgcca aaaccttatg cttgtccaca tggcaagtgc
       61 atctattgtc ctggaggtat tgaatataat actcctatga gctatgttgg tactgaacct
      121 gcaactaaaa tagcacagtc ctttgaatat gatgcttatt atcaagttaa atcaaaactt
      181 agtcaattat atcaaagagg tcataatgtt agtaaaattg aactagtaat tgtaggtggg
      241 acatttccat tcatgcctga aatatatcaa agagaatttg ttaaaaaatg ttttgatgct
      301 ttaaataatg atatatcttc aaccttggaa gaatctatta ttaaaaatga atatgctgaa
      361 attcgatgtg ttggctttac agtagaaaca aagcctgatt attgtaaaga acaacatgtt
      421 gatttaatgt taaaattggg aataactaga attgagatag gtgtccaaac gttagaagaa
      481 aatatttata aattgataaa tagaggacac aacttaacag atgttaaaaa ttcttttcaa
      541 attgcaagag attgtggata taaaattgta gcacatatga tgcctggatt gcctggatca
      601 acaacagaaa gtgatattaa tagttttaaa ctgcttttag aaaatgattc ctttaaacct
      661 gatatgctta aaatttaccc aactttagta cttaaaaata ctggaatata taaaatgtat
      721 atgaatggaa aatatcatgc ttacacagaa gatgaattgg taaatattct ggttgaagta
      781 aaaaagataa taccaccatg ggttagaatt atgcgaatcc aaagagaaat tgaaccttca
      841 gatattatag caggttcaaa aaaaggaaat atacgtcaaa tagcaatgaa aaaattaaaa
      901 gaattaggaa caaaatgtaa atgcataaga tgtcgagagg caggacttca aaaactcaaa
      961 aactttaacc aacaagaaat aatattaaat agaattgact actttgcatc tagaggaaaa
     1021 gaagttttct tgtctatgga aagtaaagat aaaagtttgt tatttggttt tttaagatta
     1081 agaaatatcc cattttctca tagaaaagaa ttaaatgata ataataataa aaggaattcg
     1141 gctattataa gagaattaca tgtatatgga caagtagtag atgttggaca aaaaaataat
     1201 tccctatcat ttcaacataa tggtcttgga ttacatttaa tagaagaagc tgaaaaaatt
     1261 tccaaagaag agtttcaaat agataaacta tctgttatca gtgcgattgg aactcgcgct
     1321 tattataaga aactaggata cattcaaaat ggtccttatg ttacaaagca actaaagtaa
     1381 taataagtat actaaagtga aaatcaagtt taaggattta tttacaaaaa ccctaaatat
     1441 ttaatgaaaa aggcttattg aaaaagatgt atttgtaaag taaaggttat cccaatagtg
     1501 gaaattgaaa ctagttagac taatcggtgt tacatactga aaaattcaat ttagatttca
     1561 cgtatatgtt gaatcaactt caaaaaaatt tcttttcaat ttgataagga gtcactcaga
     1621 gtcacttttc ttatttgagc caaagctaat actaacataa aagtatctga ttaattaata
     1681 ttataagacg taaaattatt tgctaacaaa atgataaaaa aattaattaa taaaatcttt
     1741 atgcttatga attataataa tattttatta ctatagtgaa attattgccc aagataataa
     1801 gattgatctc tcctgacatt tataacttat catgtgacaa gagtgtcttg atattaaatc
     1861 ctgatttcaa aaaggatata tttttaaatt cactttaact gatattaata caaattaaat
     1921 ttatccacat tgattagctt ttatatttgt agaatccttt cattgtcgag gtgtacgaag
     1981 tgtagtttat aatttcaaaa aaatatcata atcttctaaa ataaaataca tttaaattta
     2041 tataaataat aagttagaaa agaaatgtta attattgtat atgtaaaaag catataatga
     2101 ctttaactga taggatttgt aagtaataat gatagaaaaa attattggaa aagggacctg
     2161 gatagataaa gtagcaaata ccattatttt gagagaaaaa aaactaaatc gcaatcttga
     2221 tattattaga gtagaaagtg gattaggagc ttcgggaatt cctcatatag gcagtatggg
     2281 agatgcagtt cgtgcctatg ggattggatt atctcttaaa tatcagggat ataattctga
     2341 attgattgct tattctgatg atatggatgg tttaagaaag attcctacag ggttcccttc
     2401 atggctacaa gatcatatag ctaaacctgt ctctaatatt cctgacccat ttggtgattg
     2461 tcatagttca tatggatctc atatgagtag cttacttctt gatggattag ataaaacaga
     2521 tattaaatat atttttaaga gtgctagaga agtctataaa agtggtatac tgattgatgc
     2581 aattgatcaa attcttacaa agagtgagta tctgggacag aaaatttctg aatttgttgg
     2641 tcaagataag ttcctaaatg tattacctta ttttccaata tgtaaagaat gtggaaaact
     2701 ctatgtagca catgcaaaag aatatttgac taccgaaaag aaagtattat atgaatgttc
     2761 tggaagtaaa ataggaaata gagaaattaa aggttgtggt tataagggag aagcacatat
     2821 tgggaaggat gaaggaaaac tagcttggaa ggttgaattt gcagcacgat ggaaaatatt
     2881 agatatccgc tttgaagcat atggaaaaga tattatggat tctgtaaaaa ttaatgattg
     2941 ggtatgcgaa gaaatattaa aatttcctca tcctttgcat ataaaatatg aaatgttttt
     3001 agataaggga gggaaaaaaa ttagtaaatc tgctggaaat gtattaactc ctcaaatgtg
     3061 gatgaaatat ggtacacctc aatctattct tttattactc ttcaaaagaa taactggaac
     3121 acggcatata ggaatagatg atattccttc attga
//
LOCUS       DATIAS010000349         3006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1561336, whole genome shotgun sequence.
ACCESSION   DATIAS010000349 DATIAS010000000
VERSION     DATIAS010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3006
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1561336"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VLA74_07090"
     CDS             complement(<1..431)
                     /locus_tag="VLA74_07090"
                     /inference="COORDINATES: protein motif:HMM:NF014646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing protein"
                     /protein_id="HSF50507.1"
                     /translation="MVYIRVKKIKNNSYAYLVKNVWTEKKPKQITVKYLGKISKLTID
                     DIPEEYRKTENVISFFGKFSEKERDKESEKIYQDRLFEALINYDINEVLNIYSSSTKS
                     LDLADFYEFILIPVLQKIGDMWEKGILDVATEHTCSNAASNL"
     gene            complement(705..778)
                     /locus_tag="VLA74_07095"
     tRNA            complement(705..778)
                     /locus_tag="VLA74_07095"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(742..744),aa:Pro,seq:cgg)
     gene            complement(961..2313)
                     /locus_tag="VLA74_07100"
     CDS             complement(961..2313)
                     /locus_tag="VLA74_07100"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF50508.1"
                     /translation="MEEKKYNIAIIGGGILGVSIGYFLAFNSQANTIIIEQEKDVGYH
                     TSSRNTGKVHSPFLYDPQKKKIFGKIAYLGYEMWEKYSHSKNIYFKNDGVIEIAKEDK
                     DIDTLRKYLEWGIKNGLDEKDISFLDFNQTQKIEPNVKCRASIYCKRDASVDYSLLTK
                     YLKEDYLFSGGNILFSHKVKRIKSGGQNTIIIRSDKGKEETIQTDYIINAAGGNSLEI
                     AHSFGIGKDFINLYFRGEYWISPKEYESLTCRSIYTVPRQKKFPFLDPHWIVRIDGHC
                     EVGPNALPVCGAYAYNIRNNFRGVFPRIQEVVRKKGFWSLVMDKEFLSLILTETNSSI
                     SKKAMINRVKQFLPLIDPKKFNRRGISGIRSVLINNQGSFIPDTLLLKDVSSLHILNY
                     NSPGATGALPMAAMIVRDLAKEGIILKNKTNEIPQTKTLQGVPEPLWNIEDIYSRIRS
                     "
     gene            complement(2511..2840)
                     /locus_tag="VLA74_07105"
     CDS             complement(2511..2840)
                     /locus_tag="VLA74_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50509.1"
                     /translation="MENSAATSKYMIKQLVDNGSNVTLSLSEDIELEPISQQQMILEA
                     VDRTVTDDEVKQQIKPLLEAILKSQPQTVIKTYPKTVIQITMPKRRYQIMGNPQVGEI
                     LQVDIKR"
BASE COUNT          904 a          500 c          416 g         1186 t
ORIGIN      
        1 aggttcgagg ctgcgttact acaagtatgt tccgtggcaa catctaatat tcctttctcc
       61 cacatgtccc ctatcttttg caacacagga attagaataa attcataaaa atcagctaaa
      121 tcaagactct ttgtagaact agaataaata tttaatactt catttatatc gtaattaatc
      181 agagcttcaa atagtctatc ttgatatatc ttttctgatt ctttatccct ttctttctca
      241 ctaaattttc caaaaaatga tattacattt tctgttttgc gatattcttc gggaatatca
      301 tcaatggtta atttagaaat ttttcctaaa tatttgactg ttatttgttt aggttttttt
      361 tcggtccaga cattttttac taaataagca tatgaattat tttttatttt ttttactctt
      421 atgtatacca tttttactga ccgccgtaca acatacaggt aggaatagcc gtagaatctt
      481 tcataattgt atatagtgtt catgtttatt tatacatagt gctaaatcgg ttacatagtg
      541 ctaaatataa taggaagaaa ataaaaggtt taatcgataa aatattttac atatgctttg
      601 cacttgtttg tagaatataa agttcagaac tattttgtat gcattaatta gatttttcta
      661 tattgcgctg tctttgtaga ccgagatttg aattaaatat tcgatggggt cggccggatt
      721 tgaaccggcg gtctccagcg cccgaggctg gaatcatgcc aaactagacc acaaccccgt
      781 aaatcattag atgtattgaa ggtcaccgta attattaact tattttttaa taaaaaaatg
      841 aattcactga aaaaatatat ggtatatata tcattttttt ctatctacaa tcgagattcg
      901 gtttccaaag taaaagtaac tttttacttt caatagcctc atccgttaat ttttaaaaac
      961 tcaagatcta attctagaat atatatcttc aatgttccat aaaggttctg gaacaccttg
     1021 aagagtttta gtttgtggta tctcatttgt tttatttttt agaataattc cttccttcgc
     1081 tagatcacgt acaatcattg cagccatcgg taatgcacca gttgcgccag gggaattata
     1141 attcaggata tgcaatgatg agacatcttt taataacaaa gtatctggga taaatgaacc
     1201 ttgattattt attaaaaccg atcttattcc agaaattcct ctcctattaa atttcttagg
     1261 atctatcaat ggaagaaatt gttttactct atttatcatg gcttttttag atattgaact
     1321 atttgtttct gttaatatca aagaaagaaa ttctttatcc ataactagtg accaaaaccc
     1381 cttttttctt actacttctt gtattcttgg aaacactcct ctaaaattat ttcttatatt
     1441 gtatgcatag gctccacaaa ctggtaaagc atttggaccg acctcacaat gaccatcaat
     1501 cctcacaatc caatgaggat caagaaaagg aaatttcttt tgtctaggta ccgtgtaaat
     1561 actacgacat gttaaagatt catattcctt aggtgaaatc cagtattctc ctctaaaata
     1621 taaattaata aagtcttttc caattccgaa agaatgtgca atttcaagag aatttcctcc
     1681 agccgcgttg ataatgtagt cggtctgaat tgtttcttcc ttccctttgt cggatcgtat
     1741 tattattgtg ttttgacccc ccgactttat tctttttacc ttgtgagaaa aaaggatatt
     1801 ccctccgcta aataaataat cttcctttaa atacttggtt aggagagagt aatctacact
     1861 tgcatctctt ttgcagtata tcgatgctct gcatttgaca ttcggttcaa ttttttgtgt
     1921 ctgattgaaa tcaagaaaag aaatgtcttt ctcatcgagc ccatttttta ttccccactc
     1981 taaatatttc cttagagtgt ctatgtcttt atcttctttt gcgatttcta ttactccatc
     2041 gtttttaaaa taaatattct tagagtgaga atatttttcc cacatctcgt atcctaagta
     2101 agcgattttt ccaaaaattt tctttttttg tggatcatat aagaaaggtg aatgaacttt
     2161 tccagtgttt ctagaacttg tgtggtatcc gacatctttt tcctgttcaa tgattattgt
     2221 attagcttga ctattgaatg ccaaaaaata tccaatagaa acccctaata ttcctccgcc
     2281 aataattgca atattgtatt ttttttcttc caccgtttgt ttaggataag ataaaagtaa
     2341 ttctaatatg atttttttta ttagcagata cgaatgtatc tagtttttag gataatcttt
     2401 gttactaata ctctattttg acattatctt tattccttat taattattta attgaaaata
     2461 taaacagata aggagaatat cctatttttt atttttattt ttgtttttat ttatcttttg
     2521 atgtctactt gtaaaatctc tcctacttgc ggatttccca taatttgata tcttcttttt
     2581 ggcattgtta tttgtataac ggttttagga tatgttttaa taactgtctg aggttgtgat
     2641 ttcaaaatag cttctagtaa aggttttatc tgttgtttga cctcatcgtc tgttaccgtt
     2701 ctatctacag cctctaatat catctgttgc tgggaaattg gttctaactc tatatcttca
     2761 ctcaaagata atgtaacatt ggatccatta tccaccaatt gttttatcat atacttactt
     2821 gttgcagcag aattttccaa tttttttaca gagtaaaaga taaatgtaat attattaatt
     2881 gttatttttt ttatttttac aattcaagtc aaaatattga ctcaaaataa tattgttgaa
     2941 tgtttaaaca gaatacatta ttccaccaga tacaattggg acttgttcaa ctttggcaag
     3001 ttcttt
//
LOCUS       DATIAS010000350         3302 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_744619, whole genome shotgun sequence.
ACCESSION   DATIAS010000350 DATIAS010000000
VERSION     DATIAS010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744619"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VLA74_07110"
     CDS             complement(<1..671)
                     /locus_tag="VLA74_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta"
                     /protein_id="HSF50510.1"
                     /translation="MTLNIAVIIKLEPDFSEGSISYNPDGTLNRAETKSKLGAHSVIA
                     SLAAFYAKVNYGARISVATMGPPMSDIALKEAQMLCDADSLHLYTDRIFASADTLATA
                     EVLRAGIKKMDMNDDNNRGIDIIFSGHRASDGETGQTGPQTAWKLNYPFFGNVINYSI
                     NLKERLIILQRIISLNGMYNIVEEIEAPLPVFISVDPSYKPSFNTLSSRLISTRYQNE
                     AKSRG"
     gene            complement(1444..1845)
                     /locus_tag="VLA74_07115"
     CDS             complement(1444..1845)
                     /locus_tag="VLA74_07115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50511.1"
                     /translation="MENGLKQNDEAERSLDYNKYTLKYLYNSSDIFFHLFINTKIYDK
                     KTNQNIENQGILLRSWNPITKRGERYVFKKGEEGEGDLNIKKVYLPDTKTVFEFSQEE
                     NLNEGSYKLAKEIIHVCPHKDIQLRFSDREQ"
     gene            complement(2017..2481)
                     /locus_tag="VLA74_07120"
     CDS             complement(2017..2481)
                     /locus_tag="VLA74_07120"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF50512.1"
                     /translation="MDKKISRILVAIDGSEKSFEAAGYAISFSIKFDSQVIALYVVVS
                     ETGFSYSSLGLVPDDSINKLLEMEKKKAEGWFEKVKQESSYVDQTKIIKFKSQVIVAS
                     SIVPAIINFSEKEKIDLIVMGTRGRSGLKKLLLGSVASGVITHSHCPVLVIK"
BASE COUNT         1070 a          559 c          443 g         1230 t
ORIGIN      
        1 tcccccctag atttagcttc attttgatac cttgtagaaa tcaatcttga tgataaagta
       61 ttaaaggatg gtttgtaaga gggatcgact gaaataaaca cgggaagagg cgcttcaatc
      121 tcttcaacaa tattatacat tccattcaaa gatataatac gttgaagaat tattagtctt
      181 tcctttagat ttatactata atttattaca tttccaaaaa acggataatt aagcttccac
      241 gctgtttgag gtccagtttg accagtttca ccatctgagg cgcgatgacc tgaaaaaatt
      301 atgtcaattc cgcgattatt atcatcattc atatccattt tttttattcc tgctcttaat
      361 acctcggccg tagctaaagt atctgcacta gcaaatattc tatcagtata aagatgaagc
      421 gagtccgcat cacacaacat ttgtgcttct tttagcgcta tgtccgacat tggaggtccc
      481 atggtagcaa ctgagatgcg tgccccataa ttaaccttgg cataaaaggc tgctaacgat
      541 gctatcacac tatgagcacc taatttgctc ttggtctcag ctcgattaag agtaccgtcc
      601 ggattatagc taatactacc ttcagaaaaa tctggttcaa gttttataat taccgcaata
      661 ttgagagtca agagtttata tcttatttta aaggtttaaa ataatttgtc aagctggatg
      721 agtatattta ttattagcta ttactagttt cgaatttagg tagatttgat tgtattcgga
      781 cgaagtaata aacacccaga agacgaaaga tataactaaa aagaatatga aatgaagagc
      841 ttctagcatt aactagcggt gcctaacaat attgtcctaa ttatatttaa tcaaacaatt
      901 gccagcataa atctattttc aaaatatatt ctcaagtata aaatattaat gaagtgaata
      961 tattggtgat cctgaatcaa ttggcattat attttttata tcttcatttg tcaaggatat
     1021 ctttatacat atggaacttt tgtcctaaaa aacgatttga atttcacgat caatccgttt
     1081 tttcagaatt gttaatttct tccacttaaa ccgtcaatcc tattgaaatc aatatactgt
     1141 cgatactaaa aaatttatgt gattatgaaa tttatttact tatttggcag tatttttttt
     1201 atgatgcaga tttttattga gaattcattt aaaaagtata gcacattgat atccaaaaaa
     1261 ttcttttctt ttcttattta attaagcaat ttgtcataaa taaaacaaac catattaacc
     1321 tgtattttaa ataggaaaaa aagtacttta atttcataac aagtctaaaa atgtgatcat
     1381 tttgttttag aatagaaaaa ttttcactat attcaacaaa agattttgat tatcaggtca
     1441 tgtttattgt tcgcgatcag aaaatcttaa ttgtatatct ttatggggac atacatgaat
     1501 tatttctttc gctaatttat aactcccttc attcagattt tcctcttgtg aaaattcaaa
     1561 taccgttttt gtatcgggta aatatacttt tttgatattt agatcaccct ctccttcttc
     1621 tcccttttta aaaacatatc tttctcctct tttggttatt ggattccaac tccttagtaa
     1681 tatcccttga ttttcgatgt tttgatttgt ttttttatca tagattttag tatttatgaa
     1741 aagatggaag aaaatgtcgc ttgaattata gaggtacttc aatgtatatt tgttataatc
     1801 taaagatctt tctgcttcat cattttgttt taatccattt tccaatttat taaaaaacat
     1861 tctttactag tattattctc ctttaatata ttattacata cattttattt agattttact
     1921 aaaacgtcaa aaaaattgaa gtcattacaa gtatgttaga aatgaatgac atagatatga
     1981 tttcttcatc atgagatgtg ctatatcttt aaatcactat tttattacta aaactggaca
     2041 atgagaatgt gtaatcaccc cagaagcaac acttcccaat agtagctttt tgagaccaga
     2101 tcttccacgc gttcccatca ctatcaaatc aattttttcc ttctccgaaa aattaatgat
     2161 tgcaggtact attgacgaag cgacaattac ttgggactta aatttaataa tttttgtttg
     2221 atctacataa cttgactcct gtttaacttt ttcaaaccac ccttcagcct tttttttttc
     2281 catttcaagt agtttattga tggaatcatc aggaactaac ccaagagatg aatagctaaa
     2341 tccagtttct gaaaccacca catatagagc gattacttga ctatcgaact tgatagagaa
     2401 agagatagca tatcccgctg cttcaaatga tttttctgac ccatcgatag ctactaagat
     2461 tcttgagatt tttttatcca tataatagat aagatataaa atataaaata taaaaaacgt
     2521 atcgaacata taagaggatt atttccatca gatttaacac caaacgatag gaatatgata
     2581 actcgcatac aaaatgggtg tatttagaat gccaaaagaa attaaaatat caacgattag
     2641 ttcgccaatt gctgcttgtg tttgctctgt ttcggaactc gtttatacaa tctttttata
     2701 catccaatca acaaatacct tacaattata ccatttaacc agttatacaa tgatactttt
     2761 agcatcatct cttaccaagt taccaaatca tcttcgtaat cctgtactct gatctgatag
     2821 cagtaacata ttctcaatac attcacttga taatggaaaa aatgctttct gcaatcatct
     2881 cctaccatag gattagctat ctttccattt atcaccgtca gttttctgct tctttacagt
     2941 cctgtttctt agatattgat ttttactttt aaatctggaa tccttcttta ccttataatt
     3001 gctggttgga tgtctttaaa tgattgaaag tgaaaaatct tatcactgtc attaggaata
     3061 atcgccaatt gtaatattta ctcttttatt ccgctttatt gttatatcat ctaccaggtc
     3121 aggaagcatt cctgtcatgt acttctttat tagttacttt taatgataaa agtccctttc
     3181 gtttggtatc aactgctaaa tgtatttaga taaccctcta ttgacagtgc atattttttt
     3241 gacattttag tattgttatt aggtctctaa atgtagtaac aatacagtct atattaaatt
     3301 ct
//
LOCUS       DATIAS010000351         5163 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1835349, whole genome shotgun sequence.
ACCESSION   DATIAS010000351 DATIAS010000000
VERSION     DATIAS010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5163
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1835349"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1730
                     /gene="acs"
                     /locus_tag="VLA74_07125"
     CDS             <1..1730
                     /gene="acs"
                     /locus_tag="VLA74_07125"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HSF50513.1"
                     /translation="NASINCLDKHINSEIKNKAAIIWEGENGENITLTYYQLYQKVNQ
                     FSNALKNLGIRKGDRVTIYLPMVPELPIAILACSRIGAIHNVIFSGFSSTALVDRIND
                     AKSKIIITADGGFRRGNIIELKKIVDEAIINTPSIQNVIVLRRTGNHIEMRGKDVWWH
                     EIIQNQSSYCEPELIESIHPLFILYTSGTTGKPKGVVHSTGGYLTHIYSTAKWVFDFN
                     QQDIFFCTADIGWITGHSYIVYAPLMHGVTEILYEGTPDYPYPDRYWSLVEKHGITIL
                     YTTPTALRMYMKYGNEIPNSFNLSTLRLLGTVGESTNPDVWMWYFTIIGKEKCPIVDT
                     WWQTETGGTMISHCTGIDIMPMKPGSGMFPVPGVDLAVVDEEGNTLPQNQKGYLVIRK
                     PWPGMLMTLWNDDDKYKNNYWKKNYYFTGDYAIIDDEFYFWLLGRSDDVIKISGHRLG
                     TIELESTFISHESVAEAAVTSKPDKIKGESIIAFLVLKKSFVESDQLRKEIIEHVRNN
                     IGAIATPNEIYFVNKLPKTRSGKIMRRLLKSIVSGLTIGDTTTLEDGTSIKEIQKIYN
                     DLNDIIKNK"
     gene            1820..2311
                     /locus_tag="VLA74_07130"
     CDS             1820..2311
                     /locus_tag="VLA74_07130"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HSF50514.1"
                     /translation="MVRKMAVLIPAAIASFFIGIAGIIFVPDEIKNKPLDFDMGTIKI
                     DNSAINVEIAESDAERQRWLMFRNEEFPLNSAMILVYPKSDLYSLWLLNIQYNLDIMW
                     FNEEGKLVYLIKNAKPCENPLDPHNCTYKTTVPAKYIVVSTEGFIKENNITNSSILTI
                     ISI"
     gene            complement(2402..3367)
                     /locus_tag="VLA74_07135"
     CDS             complement(2402..3367)
                     /locus_tag="VLA74_07135"
                     /inference="COORDINATES: protein motif:HMM:NF037920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdvA-like protein"
                     /protein_id="HSF50515.1"
                     /translation="MSELKLEFVGKQVKDMYGTLMGNVVGIITDTDGSIESISVDCGD
                     SGLKQLPYEQLLVQGDYVIFIPKWRLDAQKLFRQKNLTLKRIKALQQLVEEDDTMKED
                     AEIVYVKYEKKLDELEEKEKSINEKLKERLDELNSSTKNIKSILFDAKLQYKSHEIPE
                     ETYLQVTRYTKDLMDHINLEKEEINNIKGRLEEQNLENTLPLPHSIQSEEEEKENSKI
                     YTNTNSINPTINNTPNKTTTTITASNNTNNSNSSNASLPVSSTSDNIQTKPSYSDETE
                     KYKQHISSNNADLDSKPTNDEIEKDETEKRTTDNEANWLDQVINN"
     gene            3558..4277
                     /gene="cbiE"
                     /locus_tag="VLA74_07140"
     CDS             3558..4277
                     /gene="cbiE"
                     /locus_tag="VLA74_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6y C5,15-methyltransferase
                     (decarboxylating) subunit CbiE"
                     /protein_id="HSF50516.1"
                     /translation="MPKKLFVIGVGPGDPDYIIPIAKEKILISTYIIGYRYTLRTIEN
                     FLDKKRQQIYEITMKNQELAYQKVYENMHDNECCTVPFTGDVNFSESEVVDRLLEIFG
                     NENVEIIPGISSIQIASSKSRVPLDKSHIITFHVTGDIQQKKMELIKSVLDNKSVILL
                     PRPWPNDLSKNFMPADIALFLKNNGVNTREIDVWVFEYLTDKEKETIFKGKMIDLENK
                     TFSDLSVMVIDQNKRQTYLEF"
     gene            complement(4309..5046)
                     /locus_tag="VLA74_07145"
     CDS             complement(4309..5046)
                     /locus_tag="VLA74_07145"
                     /inference="COORDINATES: protein motif:HMM:NF021287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HSF50517.1"
                     /translation="MLGIKIHYKPKFNNKPILVAALPDMGNVAGLCLNFLVKKINTKI
                     FAEIYSFWPPSVTYKKGIINYVQSSYKFYENTEYNIIFFTGDFNPSDPRRLYELCYEV
                     LKIAEMFNVKILYSLAASLKPINTIEKLVYGAVNKPEMFNLLNKLNLQILEDEGQITG
                     FNGLILGIAQEFNLDGICLLGEIDNPNVIQPKTSQAILKVLLKIINLSFIDLSELEEE
                     EKRKKFMEKQMNYFNKAINQSELPGIT"
BASE COUNT         1817 a          675 c          768 g         1903 t
ORIGIN      
        1 taaatgcatc aataaattgc ttagacaaac atattaattc tgaaatcaaa aataaggctg
       61 ccataatatg ggaaggagaa aatggagaaa atataactct aacatattat caactctatc
      121 aaaaagttaa tcaattttca aatgccttaa aaaatcttgg tataagaaaa ggagaccgtg
      181 taacaatcta tttgccaatg gttccagaac ttccaattgc aattttagct tgttcaagaa
      241 tcggtgccat tcacaatgta attttttctg gttttagttc tacagcattg gtagatcgga
      301 taaatgatgc caaatctaag atcataatta ctgccgatgg aggatttaga agaggaaata
      361 taattgaatt aaaaaaaatt gttgatgaag ctattatcaa caccccttca atacaaaatg
      421 ttatagttct acgacgaact ggaaatcaca ttgagatgag aggtaaagat gtttggtggc
      481 atgagataat tcaaaatcaa tcatcttatt gtgaacctga attaatagaa agtatacatc
      541 ctctttttat tctttataca tctggaacaa ccggtaagcc aaaaggagtt gttcatagta
      601 ctggaggtta tttgacacat atttattcta cagcaaaatg ggttttcgat tttaatcaac
      661 aagatatttt tttctgtact gcagatatag gatggataac aggtcatagc tatatagttt
      721 atgcaccttt aatgcatgga gtaactgaga tactgtatga aggaactcct gattacccat
      781 atccagatag atattggtca cttgtagaaa aacatggcat tactattttg tatactacac
      841 ctactgctct tagaatgtat atgaaatatg gcaacgaaat tccaaattca tttaatctat
      901 caactcttcg attactagga acagtaggag aatcaactaa tccagatgta tggatgtggt
      961 attttacaat aattggtaag gaaaaatgtc ctatagtaga tacatggtgg caaacagaaa
     1021 caggtgggac aatgattagc cattgtacag gaatagatat tatgccaatg aaaccagggt
     1081 caggtatgtt tcctgtacct ggtgtagatc tagccgttgt agatgaagaa ggaaatactt
     1141 taccacaaaa tcaaaaaggt tatctagtta ttagaaagcc atggccaggt atgttaatga
     1201 ctttatggaa tgatgatgat aaatataaaa ataattactg gaaaaagaat tactatttta
     1261 caggagatta tgctattata gatgatgagt tttatttctg gcttttaggt cgatcagatg
     1321 atgttattaa aatttctgga catagattag gtacaattga attagaaagt acatttatat
     1381 cacatgaatc tgtagccgag gccgcagtca ctagtaaacc tgataaaata aagggtgaat
     1441 ccattatagc attcttagta ttaaagaaaa gttttgttga atcagatcaa ttacgtaaag
     1501 aaataattga gcatgttaga aacaatatag gagctattgc taccccaaat gagatatatt
     1561 ttgtaaacaa gctaccaaaa acaagaagtg gcaaaataat gagaagatta ttaaagtcta
     1621 tagtcagtgg tttaactata ggggatacta caaccctaga agatggcaca tccattaaag
     1681 aaattcagaa aatctataat gacttaaatg atataataaa aaataagtag aaatttataa
     1741 ttattattat tattttgatt tgattattta ctaataaagg taaaattcaa atcatagagt
     1801 cattatacta cttgttgaat tggttcgcaa gatggctgtc ctaattccgg ctgccattgc
     1861 atcttttttt attgggatag caggtataat ttttgttccg gatgagatca aaaataaacc
     1921 tttggatttt gatatgggaa cgatcaagat agataattca gcaataaatg tagaaatagc
     1981 agaatcagat gctgaacgac aaagatggct aatgttcaga aatgaggaat ttccattaaa
     2041 ctctgcaatg attttagttt atccaaaatc tgatctctat tcattatggc ttttaaatat
     2101 tcaatataat cttgatatta tgtggttcaa tgaagaagga aaactagttt atttaataaa
     2161 aaatgctaaa ccttgtgaga atccattaga tcctcataat tgtacctata aaacaactgt
     2221 acctgcaaaa tatatcgtgg tatctacaga aggatttatc aaagagaata atattacgaa
     2281 ttcatcaatt ctaactataa tatcaatcta atatcaataa ttgttagatt taatatttta
     2341 tatattctag ttaaatcaac aaaagcaact atttgttaaa tttcaaataa aaatataaaa
     2401 attagttgtt tataacttga tctagccaat tagcttcgtt gtctgtagta cgtttttctg
     2461 tctcatcctt ttctatctca tcattagttg gttttgaatc aagatctgca ttattagatg
     2521 aaatatgttg tttatacttt tcagtttcat cagaatagga aggtttagtt tgtatattat
     2581 ctgatgtaga ggatactggt aaggacgcat ttgaagaatt agagttattt gtattattgg
     2641 atgcagtaat agttgttgtt gttttatttg gagtattatt tatagtagga ttaatggaat
     2701 ttgtattggt atatatttta gagttttctt tttcttcctc ttcagattga attgaatgtg
     2761 gtaaaggtaa tgtgttttct aaattttgtt cttcaagtcg accctttatg ttattaattt
     2821 cttctttttc taaattaata tgatccatca agtctttagt atatcgtgtg acttgaagat
     2881 atgtttcttc tggtatttca tgacttttgt actgtaactt agcatcaaat agaattgatt
     2941 taatattttt tgttgaacta tttagttcat caagtctttc ttttaatttt tcattaatag
     3001 atttttcttt ttcctctaat tcatctaatt tcttttcgta tttaacatat acaatttctg
     3061 catcttcttt catggtatca tcttcttcaa ctaattgttg aagagcttta attcgtttaa
     3121 gtgttaaatt tttttgtcta aataattttt gtgcatctaa tctccattta ggaataaaga
     3181 ttacgtaatc accttgtacc aatagttgtt cataaggtaa ttgttttaga cctgaatcac
     3241 cacaatctac actaatagat tcaatagatc catcagtatc agtaataatt cctacaacat
     3301 ttcccattaa tgtaccatac atatctttaa cttgtttacc tacaaattcg agctttagtt
     3361 cgctcatccc aattcgttaa taattacata taatggtaag aatgtcaaaa taattatgtc
     3421 atttagtcag atagtttctt ttactactga actcatttaa atctagaatt tttatttttt
     3481 attataaaat aaaaattttt ttatttaatt ttaataacaa atattattag ctattatatc
     3541 ttgtaatacg atttccaatg ccaaaaaaat tgtttgttat cggggtcgga ccaggagatc
     3601 ctgattatat aattccaatt gctaaagaaa aaattctgat atcaacatac attataggct
     3661 atagatatac actaagaact attgaaaatt tccttgataa aaaaagacaa cagatttatg
     3721 aaatcactat gaaaaaccag gaattagcat accaaaaggt atatgaaaat atgcacgata
     3781 atgaatgttg tactgttcca tttacaggag atgttaattt ttctgaatca gaagttgttg
     3841 atcgtttatt agagattttt ggaaatgaaa atgttgaaat tattccagga attagctcta
     3901 ttcaaattgc atcttcaaag tcaagggttc cactagataa gtctcatata attacatttc
     3961 atgtaactgg agatattcag caaaaaaaaa tggaattgat aaaatccgta ttagataata
     4021 aaagtgttat tttattgcca cggccttggc caaatgattt atcaaaaaat tttatgcctg
     4081 cggatattgc tttatttttg aaaaataatg gagtcaatac aagagaaatt gatgtctggg
     4141 tttttgaata tttaacggat aaggaaaaag aaactatttt taaaggaaaa atgattgatt
     4201 tagaaaataa gacatttagt gatctgtcgg tgatggttat tgatcaaaat aaaagacaaa
     4261 catatttaga attttgacta gataatttta ttatctaaat cattattttt acgttattcc
     4321 tggtaactca ctttggttta ttgctttatt aaaataattc atttgttttt ccataaactt
     4381 ctttcgcttt tcttcttctt ctaattctga taaatcaata aatgataaat taattatttt
     4441 taataaaact tttagaattg cttgagaagt tttaggttga ataacatttg gattatcaat
     4501 ttctcctaaa agacagattc catctaaatt aaattcttga gctattccta aaattaatcc
     4561 attaaaacca gttatctgtc cttcatcttc taatatctgc aaatttaatt tatttaacag
     4621 attgaacatt tctggtttat ttactgcacc ataaactaat ttttctattg tattaattgg
     4681 ttttagagat gcggcaagag aatatagaat tttgacattg aacatttctg caatttttaa
     4741 aacttcataa cataattcat ataatcttct tggatctgaa ggattaaaat ctcctgtaaa
     4801 gaatattata ttatattctg tattttcata aaatttatag cttgattgca cataatttat
     4861 aattcctttt ttatatgtta cagatggtgg ccaaaaggaa tatatttcag caaaaatttt
     4921 tgtatttatt ttcttaacta agaaatttaa gcataatcct gctacatttc ccatatctgg
     4981 taatgctgct acaagaattg gtttattgtt aaatttcggt ttataatgaa tttttatccc
     5041 taacaatttt atatttatat attattataa ttttgaattt ataattaact gataatatat
     5101 atcattatga taattctcat tcaaatcgca atttttatta gtagtaaaat attcttcttg
     5161 tat
//
LOCUS       DATIAS010000352         2646 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1835464, whole genome shotgun sequence.
ACCESSION   DATIAS010000352 DATIAS010000000
VERSION     DATIAS010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1835464"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VLA74_07150"
     CDS             <1..624
                     /locus_tag="VLA74_07150"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSF50518.1"
                     /translation="DKKLPGIIMIHEWWGLNENIKNMANSLAKEGYVVLAVDLYNGQV
                     TDATDIAKTLVSKVRDNPSEAINNLQSAVRYLASLENVNSSKIASLGWCFGGGQSLQL
                     ALNTEPDYPLAATIIYYGNLVSDQESISKIKWPVLGIFGDQDQSISVNDVKNFEKIIT
                     STGIPNEIYIYEGVGHAFANPSGDNYAPKETADAWQKTLAFLNKYIK"
     gene            757..1074
                     /locus_tag="VLA74_07155"
     CDS             757..1074
                     /locus_tag="VLA74_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50519.1"
                     /translation="MGAKTDLVHEYRDRTYIRKDILVLLAEYGELNQTKLLSYCGLNL
                     AKHKKIIDELSEKGLIEKNESSWGSKIVVNYKITEKGRKFCKMVLDPYEEMFPRNKKL
                     RER"
     gene            1125..1697
                     /locus_tag="VLA74_07160"
     CDS             1125..1697
                     /locus_tag="VLA74_07160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50520.1"
                     /translation="MSNGANGRQGKSPSNNDHDSIFQIMDGIMSELNRTRKVFVFMFF
                     SMMILPVTAIIIFMYTFDEPRVDRDELRANIQEFNVLAQKLKNQMVTLENLQQGEQEK
                     QLQSLLNSQEYKQTINRIDELSQNELKLISNEPKTNLYKKEIRLITFILSIIWIILGI
                     RQYVILSSWGKRYNKFKRQQEEIDKKLDLE"
     gene            1814..2368
                     /locus_tag="VLA74_07165"
     CDS             1814..2368
                     /locus_tag="VLA74_07165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50521.1"
                     /translation="MSKSDINNQSGMKCKISRNILAGIFVGIIATIGITGISNISAQQ
                     EMGNATTTTNATSQMGEKGNLTGSIDVEKTIADAFKAKVTINIVDAITTAQNSVGPNS
                     FVKEAELTHAYGYLVYKIKVVDENMKKYKVIVDPGNGSILMQKEITYSEYGHDKMSKS
                     MGDKYKKDGYKHEYDKTMKYDKMR"
BASE COUNT         1090 a          299 c          452 g          805 t
ORIGIN      
        1 gataaaaaat tgcctggaat aattatgatt catgaatggt gggggcttaa tgaaaatatt
       61 aagaatatgg caaactctct agcaaaggaa ggatatgttg ttttagcagt agacttgtat
      121 aatggtcaag taactgatgc cacagatatt gccaagactt tagtgagtaa agtaagagac
      181 aatccttctg aagcaataaa caatcttcaa agtgcagtaa gatacttagc ttcgttagaa
      241 aatgtaaatt cttctaaaat agcctcactt ggatggtgtt ttggaggtgg acagtctctg
      301 caactagcat taaacacaga acctgattat cctttagcag caacgataat atattacggt
      361 aatttggtat ctgatcaaga atcaatttca aagataaagt ggccagtatt aggaatattt
      421 ggagaccaag atcaatccat ttctgtcaat gatgtaaaaa attttgagaa gataataact
      481 agtacaggaa ttccgaatga gatttatatc tacgaaggag taggacatgc atttgcaaat
      541 ccatctggtg ataattatgc tccaaaggaa actgcagatg catggcaaaa aacattagct
      601 ttcttaaata aatatataaa ataatattca tcatttaaga taaaatcgaa tttattttta
      661 ttttaattgt aatagatata tttactagaa tgaatatttt atcctataca tattttgtat
      721 aatagaattg atttatacaa attgaaattt atatagatgg gggcaaaaac tgatctggtc
      781 cacgagtaca gagatagaac atatattcga aaggacattc tagttctctt ggcagagtat
      841 ggtgaattaa atcaaactaa acttcttagt tattgtggac tcaatttagc aaaacataaa
      901 aagattattg atgaattgtc agaaaaagga ttgattgaga aaaatgagag ttcatgggga
      961 agtaaaattg ttgtaaatta taaaattaca gaaaaaggaa gaaaattttg caaaatggta
     1021 cttgatcctt atgaagagat gttcccaaga aataaaaaat tacgagaaag ataaataaca
     1081 atgttaatta aagaatttaa gagaatttcg gggagttaat ctatatgtca aatggagcta
     1141 acggaagaca gggtaagagt ccatctaata atgatcatga tagtatcttt caaataatgg
     1201 atggaataat gagtgagtta aacaggacaa gaaaggtttt tgtatttatg ttttttagta
     1261 tgatgattct tccggttact gctataatta tttttatgta tacctttgat gaaccaagag
     1321 ttgatcgtga cgagcttcga gctaatatac aagaatttaa cgtattagca caaaaattga
     1381 aaaatcaaat ggtcacatta gaaaatttac aacagggtga acaagaaaaa cagttacaat
     1441 cattattgaa ttctcaagag tataaacaga caatcaacag gattgatgaa ttatcacaaa
     1501 atgaattaaa gttgataagt aatgagccaa aaactaattt gtataaaaaa gaaattcgat
     1561 taattacatt cattctttca ataatatgga taattttagg aatacgacaa tatgttattt
     1621 tatcctcctg gggaaaaaga tacaataagt ttaaaagaca acaggaagag atagataaaa
     1681 aacttgattt ggaataataa ataataataa taatgcattt gcaaaaagat tagttgattg
     1741 aagtacatca attaacattg ttaagtgcca atgtttagcc aaccttaaaa tatatccatt
     1801 attatttatg cctatgtcaa aaagtgacat taataatcaa agtggaatga aatgtaagat
     1861 ttccagaaat attttggctg gaatatttgt tgggattatt gcaacaattg gaattacagg
     1921 aatctccaat atatctgcac aacaagaaat gggtaatgct actactacta ctaatgctac
     1981 ctcacaaatg ggtgaaaaag gaaatttgac cggctcaata gatgtagaaa aaactattgc
     2041 agatgcattt aaagccaaag ttactatcaa tatagttgat gcaataacaa ctgcacaaaa
     2101 tagtgtagga ccaaactctt ttgtcaagga agcagagttg actcatgcat atggatattt
     2161 ggtatacaaa attaaggttg tggatgagaa tatgaaaaaa tataaagtaa tagtagatcc
     2221 aggaaatggc agtattttaa tgcaaaagga aataacatat tcagaatatg gacatgacaa
     2281 aatgtctaaa tctatgggag acaaatacaa gaaagacgga tataaacatg aatatgataa
     2341 gacaatgaaa tatgataaaa tgagataata ataataaaat aatatgatat caaataagaa
     2401 ttaaaaaatt tattttattt taatccttat caaatttttt atatgaacaa actaaaaaat
     2461 ttttaaaaat attatatttt agaataagtg tataaataaa ggtaactttt aacatctaaa
     2521 accttagtta taatatttcg agataccatg tgataacatg gaagaaaata agatagttat
     2581 tcaaaaatgt ttaaacagtc atttgaaaaa gaagaatcta aagactattg gttaattgaa
     2641 aatgta
//
LOCUS       DATIAS010000353         2343 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1289645, whole genome shotgun sequence.
ACCESSION   DATIAS010000353 DATIAS010000000
VERSION     DATIAS010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289645"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..331
                     /locus_tag="VLA74_07170"
     CDS             146..331
                     /locus_tag="VLA74_07170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50522.1"
                     /translation="MIADTGERIDMIMTNLNFGKESTITVFGGYGNGKADKEAIIYET
                     GFLDNYMQQTTQFLEHV"
     gene            677..868
                     /locus_tag="VLA74_07175"
     CDS             677..868
                     /locus_tag="VLA74_07175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50523.1"
                     /translation="MRKGQKLIKTVFHKFYSGSGEDASQLFNPFNLKTLDDEVIRSVI
                     GHIHDMSDEEFDKIITTTN"
     gene            1370..1789
                     /locus_tag="VLA74_07180"
     CDS             1370..1789
                     /locus_tag="VLA74_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50524.1"
                     /translation="MLGDLFYEAKGRITSKRILDLDGPKTESSYFLEGKMREIEVEEI
                     GTFTSTPISHGLFYVEGKDIVTVKGSVDEMATVKAQSISKLIRDSSKIVTGSNFYQSS
                     NTGKLSFLNNLVGVHEASVDKDGHIIYKVWEWKPPNL"
BASE COUNT          861 a          319 c          383 g          780 t
ORIGIN      
        1 tccagataga gaacaaatga agttctctta aatttaatgc ctttaaagga aaggatatcg
       61 ttgatgctgt cgctagactc tgtctcttga atatttatct ccattaatag gtggaaaaga
      121 tagtccttta actgtaggtt atccgttgat agcagacact ggtgaaagaa ttgacatgat
      181 aatgacaaat ctaaattttg gaaaagagag cactattaca gtttttggtg gatatggtaa
      241 tggcaaggca gataaagaag cgataatcta tgagacagga tttctggaca actacatgca
      301 acaaacaact caatttcttg agcatgttta aacaattatg aaaataaatg gaagagccgc
      361 tatagtcgtt ccagataacg ttctttttga ggttgccctg gcaaatagtt agaagaaaat
      421 tactcgatga ttttgatgtc catgcttttt tgagactgcc aaccggaatc ttttgtgctt
      481 actgtgttaa gacaaatgtc atattctttg acaaaaagcc tacattcgat agaaattcca
      541 cagagaagtt atggatatat ttgtttttaa taaaccagac tgtagatgaa aagtaataat
      601 aatgacgaga tgattaaaaa atgctaagaa tatattatat aaaataataa tattatgcac
      661 tgattgatta agaatcatga gaaaaggtca aaaattaata aaaacagttt ttcataaatt
      721 ctattctggt agtggagaag atgcatcaca attatttaat ccgttcaatc tcaaaacgtt
      781 agatgatgaa gttataagat ccgtaattgg tcatattcat gatatgtcag atgaagaatt
      841 tgataaaata ataacaacta caaactgacc ccaataattt attttattac actagcactt
      901 acatatgtga gaataaaatc aaaaatataa ataaaaagaa gcattttaag catccctgca
      961 tgttcttgat tcatatagtg atgaagttca tgttcagaat taaatgattt accacactct
     1021 tagcatttgt tggctttggt gatttatgac gacatcaaat acgatatata tccattcatt
     1081 aattaatttc tcatgttttt ctatgggtga ttccttaagt taccttgatt aaaaatcaaa
     1141 attttgcaga gttgccttaa ccatactaag taatatacgt ctacgttatt gaataaaatt
     1201 cttcacagaa agttaaatcc attcctacag cattgaagaa tttaggtaat atctgagtct
     1261 tttggtttct ttatttgaat aaaaagcgtt taaccactct ccttgctctg gattttcttt
     1321 tattttaatt gactttttat attattttag tttattacgc attattaaca tgctaggaga
     1381 tttattttat gaagcaaaag gaagaattac atctaaaaga atattagatt tggatggacc
     1441 taaaacagaa agttcatatt ttttagaagg aaaaatgaga gaaattgaag ttgaggaaat
     1501 aggaacgttt acgagtactc caatctcaca tggtctcttc tatgtagaag gcaaggatat
     1561 tgtaacagtt aaaggaagtg ttgatgaaat ggcaactgtc aaagcacaaa gtattagtaa
     1621 acttattaga gattcatcaa aaatagttac tggctctaat ttctatcaat cttcaaatac
     1681 aggaaaatta tcattcttga ataacctagt aggagttcat gaagcctcag tagacaagga
     1741 tggacatatt atctataaag tgtgggaatg gaaaccgcct aatctctaat tctaaatgga
     1801 ataataaata gaatatttca cttctgcact tttctcaaac ttcattcaat aatagtattg
     1861 tattgaaatt tcgataggat ttcgccaaat atgataataa gtctgtatga ctagtaacat
     1921 aagtggaatg cagatcagag aggccgttaa tcttagtaag tcattaaagc aaatttactc
     1981 gtaaaatgat acaagtgaaa agttcctgat gattatattt ctcaaattta aaactataga
     2041 ctaatggtaa cattaataat agatgactaa attgaaaaat caaaaacata tggcagacta
     2101 attctcagtt taaatatagg tggtctaatt gatcttaaca tgatggaggt ccatccttgt
     2161 ctaacgatca acatgcgaag atccactctc ttggcaaaat gataaaattt ggtctttaat
     2221 tggatcgaaa tttaaagtta aaaaattgta gatcgatttt agatagaata tttgtaaatt
     2281 aaaaaatcaa tcctattttc aaaaaataat attttatttg ttgttgtaag ctctttccaa
     2341 ttc
//
LOCUS       DATIAS010000354         3679 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_63679, whole genome shotgun sequence.
ACCESSION   DATIAS010000354 DATIAS010000000
VERSION     DATIAS010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63679"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..663
                     /locus_tag="VLA74_07185"
     CDS             286..663
                     /locus_tag="VLA74_07185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50525.1"
                     /translation="MKSKEEFVFIKMSSSLKIFVLVLFLINSLSIKVLALNENSVNTT
                     SPHYDNELINNTNDSVMLPGSNMTFGSSLDNAKMHLMEAIMDIEDNNIDGALMQLNMT
                     SNYIKMHEYEMADMMLMINKMLK"
     gene            846..2531
                     /locus_tag="VLA74_07190"
     CDS             846..2531
                     /locus_tag="VLA74_07190"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSF50526.1"
                     /translation="MSKGNRKSVLFSFSAGIVAGLASMAIIIMIKVFAGGLSLPELAS
                     QTLFSLTPGEFESQAIETFGPLAKYSTFIGSIIVITIILGIFGILLDKLYHKFNLNRY
                     ILKTISSFALTYGILVIISLILVTIIQARSGSQAISIQLVILSLIPSQIAYGLILLLF
                     LRKPKGKVEQKPYLQQQTIIENTKEEEKKNYNRRDFIRLIFASIVSIPIIYFGLNRLF
                     SPQEVEQQQQQFQSDTSNLLPQRQQSGSIPSEFKDPALAPLLASEITPTYLFYRIDIN
                     PIVPEVDVNSWNLQIKGMVGNPLKLTYDEIRSMPAIEEFVTLECISNKIGGDLTGTAL
                     WKGVRLKDILEKAKIALSVKYIVFRCSDGYDVGIPLDKGLMNETILAYEMNLAPLTSK
                     HGFPVRAIVPGLYGMMNPKWITEIELVDKVYEGYWQRNGWTNIADYNTGSSIVIPGQA
                     PIRHRFRGLDEISLSTSNERVPIAGIAFGGDRGISKVEVSTDGGTTWKTAKIKEPLSQ
                     YTWVLWTGGFIPKEGIDNYKIVVRATDKKGKIQTAEVRKPFPDGATGYHTISV"
     gene            complement(3235..3552)
                     /locus_tag="VLA74_07195"
     CDS             complement(3235..3552)
                     /locus_tag="VLA74_07195"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSF50527.1"
                     /translation="MSTVLMLIPGGYEWILIIFVIIIVIFGAKKIPELARSFGKATSE
                     FEKARIESKNELEKIKNEDRLSREKLESIAYALRIDYDGKNDESLKKDIEAAIKRGKE
                     YDL"
BASE COUNT         1386 a          479 c          517 g         1297 t
ORIGIN      
        1 aagtaatata atatgttctt ttgataacaa agtattatag tttaaatatt ctattttttg
       61 aaatctatca attcatcaag atagagtatt attaatattc tattcttaaa aacatctttt
      121 taacaaaaaa gttctttaat taacaaatta aatcgtaatg attataatat acctttttca
      181 aaaataaaat taatctcatg gattagaaac atgtatgttg tatcgttatt caataattct
      241 aattgataac attctttaaa taacattttt caaagtacta aatttatgaa aagtaaagaa
      301 gaatttgtat ttataaaaat gagttcatca ttaaaaatat ttgttttagt attatttttg
      361 ataaattctc tttctatcaa agtattagct ttaaatgaaa attctgtaaa tactacttct
      421 cctcattatg acaatgaatt aataaataat acaaatgata gcgtgatgtt gccaggaagc
      481 aacatgactt ttggttcatc attagataac gctaaaatgc atttaatgga agcaatcatg
      541 gatattgagg ataataatat cgatggagca ttaatgcaat taaatatgac tagtaactat
      601 ataaagatgc acgaatatga gatggcagat atgatgctta tgataaataa gatgttgaaa
      661 taagtagata aaaaataaaa tagttaatta aaacatttct tcaaatgtaa aaaatataat
      721 taaagatcga atagaacaaa gactaattta ttattaataa tagtactttc tattaatcga
      781 tttttagtta ctttcagaat atctaaaaaa agaaagctta aatcatttat tctataataa
      841 attttgtgtc aaagggaaat cgtaagtcag ttttattttc cttctctgca gggattgttg
      901 cggggcttgc atctatggct ataataatca tgatcaaagt atttgctggt ggattatctc
      961 taccggaact tgcatcacaa acattatttt cactaactcc tggagagttt gaatctcaag
     1021 caatagaaac ttttggtcct cttgctaaat attctacttt tataggatca ataatagtta
     1081 tcacaataat ccttggtata ttcgggattc ttttagataa attatatcac aaatttaatt
     1141 tgaatcgcta tatactaaag actatatctt cttttgcatt aacttatgga atcttagtta
     1201 taatttccct tatattggta acaataattc aagctaggag tggatctcaa gcaatttcaa
     1261 ttcaacttgt cattctttct cttattccat cacaaatagc atatggatta attcttctat
     1321 tatttttgag aaaaccaaaa ggtaaagtag aacagaagcc ttatctacaa caacaaacaa
     1381 taatagaaaa tactaaagaa gaagaaaaga aaaattataa tagaagagat tttattcgtc
     1441 tcatttttgc atccattgtt tctattccaa taatatattt tggattaaat cgactatttt
     1501 caccacaaga agtggaacaa caacaacaac aatttcaatc tgatacatcc aatttattgc
     1561 cacaacgaca acaatcaggg tcaataccat ctgaatttaa agatccagca cttgcaccat
     1621 tacttgcttc agagattacg cctacctatc tattctatag aatagatata aatcctattg
     1681 ttcctgaagt agatgtaaat tcttggaatt tgcagattaa aggaatggtt ggtaatccat
     1741 taaagttgac ctatgatgaa ataagatcta tgcctgcaat tgaagaattt gtaaccttag
     1801 aatgtataag taataaaata ggtggagatc ttactggtac tgcactatgg aaaggagtcc
     1861 gactcaaaga tattcttgaa aaagcaaaaa ttgctcttag tgtaaaatat atagtatttc
     1921 gatgttctga tggttatgat gtgggtattc cattagataa aggacttatg aatgaaacaa
     1981 tattagcata tgaaatgaat ttagctcccc taacatctaa gcatggattt cctgttagag
     2041 ctatagtgcc aggcttatat ggaatgatga atccaaagtg gatcacagaa atagaattag
     2101 ttgataaagt atatgaagga tattggcaaa gaaatggatg gacaaatatt gctgactata
     2161 atactggatc atccatagtt atacctggac aagcaccaat acgacataga ttcagaggtt
     2221 tagatgaaat ttctttgagc acatcgaatg aaagagtgcc aattgcagga atagcatttg
     2281 gaggtgatag aggcatttca aaagtagaag ttagcactga tggtggtaca acatggaaaa
     2341 ctgctaaaat caaggaacca ctttctcaat acacatgggt attatggaca ggaggattca
     2401 ttccaaaaga aggaatagat aattataaaa ttgtagtaag agccacagac aaaaaaggaa
     2461 aaattcagac tgcagaggta agaaagccat ttccagatgg ggctactgga tatcacacaa
     2521 tcagtgtata gggtgtggta tggtaaatgt ctaatggaag gaaaattctt aactgattat
     2581 gacataattt tgcagtccaa ataagtataa ataaaaagat agttttcttt gatattttgt
     2641 atgattgaag ataatatcaa atattatatt ctaatattta atattagtca ataattacta
     2701 aattttctat tatatgatat aacaataatc aaatataatc cagtaatagt ataattaaat
     2761 aaaattaata ataatttagt aaactaacta ttttaaatac aaaataataa catatcacaa
     2821 aatgaacaaa ttaatagata ttgtttagaa tatgtttctg agatgagata gttctttttg
     2881 ccattatacg attatgaaaa tcaattttgt aaaaaatgtg atattgatga ttatgaaggt
     2941 aaatgtcact gtaataaatt atagtattat atttcgtaat atatctcttt tttataatat
     3001 taactcaaaa ttagacaatt atatttattc aaacgtaaat gacttccgag gacttagcat
     3061 aacatgtaat ggatctgttt ctacaaattt aaacttagat taaataaaaa attatgactc
     3121 tattatggat attatatcgt aatattcatc tatcaaaaaa gtctaatggt atatgttatt
     3181 tatacactat ctggtataac attatcattg aataatacat tcaaaaatta ctgtttagag
     3241 atcatattct ttacctcttt ttattgcagc ttctatatct ttttttaagg attcatcatt
     3301 ttttccgtca tagtctattc ttaaggcata agcaatagat tctaactttt cgcgagataa
     3361 tctatcttca ttcttaattt tttccaattc attttttgat tctatacgag ctttctcaaa
     3421 ttctgaagtt gctttaccaa aggaacgtgc aagttcggga attttttttg ctccaaaaat
     3481 tacaattatt attacaaata ttataagtat ccattcatat ccccctggaa ttagcattaa
     3541 tacagtactc aaaaacatat aatttgtcta ggatgttaaa tatttaactt ttcacttctt
     3601 ttttctattc tttattgaat ttttttgatt aaaataagta gatcatctga taaaaagaga
     3661 ttctatctat atattttgc
//
LOCUS       DATIAS010000355         2008 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1698892, whole genome shotgun sequence.
ACCESSION   DATIAS010000355 DATIAS010000000
VERSION     DATIAS010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1698892"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VLA74_07200"
     CDS             complement(<1..198)
                     /locus_tag="VLA74_07200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50528.1"
                     /translation="MLFRFVRNRTSTIVVMYSLYLYFLGLSLRNTSKALDIFDDEKRS
                     YIAVWNWIQRFGSYHIYNKRKR"
     gene            complement(1015..>2008)
                     /locus_tag="VLA74_07205"
     CDS             complement(1015..>2008)
                     /locus_tag="VLA74_07205"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF50529.1"
                     /translation="LDISKTKHAEKYGPNDKFVFLFVTETENQDDGNILGNRVYRYDF
                     VNGNLINPILLLDLPYLPGPSHNGGVMRIGPDNNLYIVMGDLNRLKDPSGDTITQNLV
                     GTSLPDGRGGVLRITYDGETVNDGFTLGDEGLLDKYYGYGVRNSFGIGFDNITGYLWD
                     TENGSHYGDEINIVKPGFNSGWRQVLGLSSMYNEFTDKEFDRNQLINFNGNGKYYDPV
                     LTWNDTIAPTTIAFIHSSTLGEEYRDDMLVGGVKNGTVLHFDLNQTRTGLQLEGELSD
                     RIVNKPSELNSAIFGTGFDIITDIKIDPIDGDLYVLAANSKNGKIYKISKDVEQ"
BASE COUNT          698 a          328 c          222 g          760 t
ORIGIN      
        1 tcttttcctt ttgttgtaaa tatggtatga accaaatctt tgaatccaat tccatacagc
       61 aatataactt cgtttctcat cgtcaaatat atctaatgct ttagaagtat ttcttagact
      121 taaaccaaga aaatacaaat acaaagaata cataactaca atagtggatg ttctgtttct
      181 gacaaatcta aacaacatat acattgttag aatagaacat tcacagctat agatctttcg
      241 ttaaattaac agcactttat agactatctt tttcaaatat tttaagagat aatcgaatat
      301 agttatttct ttcactattt ctctctccaa tatataacta attggtaaaa tattccctac
      361 ctccttccaa aatattattt ttaatttcta aattactaaa atcgttatca ttgaattcaa
      421 atgtaaacat taaattatta tctttttctt cctatggaga aatttattat gctactttaa
      481 taatgcaata atcatgacta aagatacttt aatatatttt aaaaattcat ttgatacaaa
      541 ataaagtagg tttaatagtt tttcaaaatt tttataaatt ggagtaattt atttataata
      601 gaaaaatgag gtaatccata cagattctta ttatattttt gaaattcttt agcatacatt
      661 ttgatattat aaaattctca ttttctttgg ctttaatatg accctaatag tatttagtga
      721 tctctagatt aatttttcgt tattcatggc tacattgtaa ctttccacag taatggaaca
      781 gagtatattg aaattaaatt caatactatt agatcacata ttatttaata aaaaatgttt
      841 aaaattaata ttggacaaat atattggtag aaattaatta actaattaat tattttcaat
      901 ggcatatagc ttatacctaa taatttaaat ataaaatatt tttacatgta ttaaaataaa
      961 taaaaatgaa tatatttcca tgctatgaaa atactttatt actcaactaa aatttcattg
     1021 ttccacatct ttagaaattt tataaatctt gccattcttt gaatttgctg ctaagacgta
     1081 aaggtctcca tctataggat caattttgat atctgtgatt atgtcaaaac cagttccaaa
     1141 aattgcagaa tttagttctg aaggtttatt tactatccta tcagacaact ctccttctaa
     1201 ttgcaatcct gttctagttt gattaaggtc aaaatggagg acggttccat tttttactcc
     1261 acctactaac atatcgtctc tatattcttc tcccagtgtt gaggaatgaa taaaggcaat
     1321 agttgtaggt gctattgtgt cattccatgt taatacagga tcataatatt tgccattacc
     1381 attgaaatta attaattgat ttctatcaaa ttccttatca gtaaattcat tatacataga
     1441 agataatcct aacacttgtc tccatccact attaaatcct ggttttacga tatttatttc
     1501 atcaccataa tgagatccat tttcagtatc ccacaaatat cctgtaatat tatcaaaacc
     1561 aataccaaaa ctatttctta caccatatcc ataatatttg tctagaagtc cttcatctcc
     1621 taatgtgaat ccatcattaa cggtttctcc atcatatgta atacgcagaa ctccccctct
     1681 accatcaggg agagatgttc ccactaaatt ttgagtaatt gtatcaccag atggatcttt
     1741 tagtctgttt aggtcaccca taacaatata taaattgtta tctggtccaa ttctcattac
     1801 tcctccattg tgtgatggtc caggcaaata tggtaaatca agtaacaata ttggatttat
     1861 tagattacca ttcacaaaat catatctgta gacacgattt ccaaggatat ttccatcatc
     1921 ttggttctca gtttcagtta caaaaagaaa aacaaatttg tcattaggac catacttctc
     1981 tgcatgtttg gttttagata tatccagt
//
LOCUS       DATIAS010000356         2246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_64386, whole genome shotgun sequence.
ACCESSION   DATIAS010000356 DATIAS010000000
VERSION     DATIAS010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64386"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..875)
                     /locus_tag="VLA74_07210"
     CDS             complement(150..875)
                     /locus_tag="VLA74_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50530.1"
                     /translation="MTHDLLIRGFDDQIHSQLGELAKEKGVSINSIVKDAVDRWLIQQ
                     QSDIPKKHYLLIYSDDDSILGLLKSMDRLAKESDLFRCFCGPSSTASTKLLSKLKWYD
                     GTIMPYYYGTKTIIQKQNQNQQIQIQNKKDSINYCNKVMENIVTTANNVNNKQLCCID
                     FLINDIAKSSIHQALILEKAYDDNRIPGLMYCAYKTETLLHSEIKDLVELFEGHDQVF
                     ILKDDDVYKLHITKENVHKLFLS"
     gene            974..1573
                     /locus_tag="VLA74_07215"
     CDS             974..1573
                     /locus_tag="VLA74_07215"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HSF50531.1"
                     /translation="MISFAMNQIKIQEQKEQEQFVNGVNVSKLFGTVEAIKENPEIAK
                     FNFKARGKWVNGGHNRTTINEFYGACQNFQRSQSFVFEKDEPPVLLGEDHGANPVEYV
                     FAALDGCLTTSLIYHAAAQGIKIDEVETSFSGDLNLHGFLGLDENTRNGYEKIKVEFK
                     IKADAPKEKLQELVQLAQKRSPVFDIVSHPTPVEVSLKE"
     gene            complement(1985..>2246)
                     /locus_tag="VLA74_07220"
     CDS             complement(1985..>2246)
                     /locus_tag="VLA74_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50532.1"
                     /translation="GIINTIDYAKKVTGIDKVYAVLGGFHLPADGGIYEEAIEPTVKE
                     LLSIDPDYIVPCHCTGWKATNRIIETMPKKFLQSSVGTVFTF"
BASE COUNT          772 a          345 c          331 g          798 t
ORIGIN      
        1 cattttaaat tccgtgtcaa tgataattcc ctaatactac aagaatatga taaaatattt
       61 aattagatat acttagcctt tagcaaacaa aaataaattt taaaaagcca ttatggcata
      121 tagtaattaa ttttttagat attgcataat taacttaaga aaagtttatg tacattttcc
      181 tttgtgatat gaagtttata gacatcatca tcttttaata taaaaacttg gtcatgtcct
      241 tcaaataatt ctacaaggtc ttttatctct gaatgtagta aagtttcggt cttgtatgca
      301 caatacataa gaccaggaat tctattatcg tcataagctt tctcaagtat taaggcctga
      361 tgtattgaag attttgctat atcgtttata agaaaatcga tgcagcaaag ctgtttatta
      421 ttaacattgt ttgctgttgt tactatattt tccataacct tgttgcaata atttatacta
      481 tcttttttat tttgaatttg aatctgttga ttttgatttt gtttttgtat tatagtttta
      541 gttccataat aatatggcat tatagtccca tcataccatt tgagcttaga tagtagtttg
      601 gtagatgcag tagaagatgg accacaaaaa catcgaaata aatcactctc tttggcaagc
      661 ctatccatag actttaataa tcctaatatg gaatcatcat cagaataaat taaaagatag
      721 tgtttttttg gaatatctga ttgctgttga ataagccatc tatcaactgc atcctttaca
      781 attgaattaa tagaaacacc tttctctttt gctaattctc ctaattgtga atggatttga
      841 tcatcaaatc ctcttataag taaatcatgt gtcattttct atttgttgtt attattatat
      901 ttctaaagtt atttatgtct tatgttaatg atatcgagat atcatataat aacaacactt
      961 atataacgat atcatgatat catttgctat gaatcaaata aaaattcaag aacaaaaaga
     1021 acaagaacaa tttgtaaatg gtgtcaatgt atccaaacta tttggaactg ttgaagcaat
     1081 aaaggaaaat cctgaaattg caaaattcaa ctttaaggca agaggaaaat gggtaaatgg
     1141 aggacacaat agaacaacta taaatgaatt ttatggtgca tgtcagaatt tccaaaggag
     1201 tcaatcattt gtctttgaaa aagacgaacc accagtattg ttaggagaag accatggagc
     1261 aaatccagtt gaatatgtat ttgcagctct tgatggttgc ttgactacat ctctcatata
     1321 tcatgcagca gcacaaggaa taaaaataga cgaagtggaa acatccttct cgggagactt
     1381 gaatttgcat ggctttctcg gattggatga aaatacaaga aatggttatg aaaagataaa
     1441 agtggaattt aagataaaag cagatgcacc aaaagaaaaa ctacaagaat tagtacaact
     1501 tgcacaaaag agatcacctg tatttgatat tgtttcacat ccaactccag tagaagttag
     1561 tttgaaagaa tagaaaattt cttaaagtat tggattctaa aaatttttga ttatatccaa
     1621 tacatttttt taatcaatct ctattaccgt attcgatctt ttaaaatagt catatctatt
     1681 tatttgtctc atagtgttgc ctttttcaaa tttatcagtc aatcctaaaa tataatatca
     1741 ttaattttaa attctattaa tatagttgat cactgaaact atgaccattc aactcccgaa
     1801 gataagttct tctctctttg tctgttggtc agctccttgt ctttccaatt gtggaatata
     1861 tagaaaaaat caaatactgt ccactttttg ttaaataatt attaaattgc ataaaccgcg
     1921 aatatagttg cagggttcga gtcccactac tggtgatttg ctgtagacaa ataaaaatac
     1981 aacattagaa tgtaaatact gtgccaacac tactttgtaa gaacttttta ggcatggttt
     2041 caataattct gtttgttgct ttccaacctg tacaatggca aggtactata tagtcagggt
     2101 ctatgcttag cagctccttc actgtaggtt ctattgcttc ttcataaatt cctccatcgg
     2161 ctggaagatg aaagcctccc aagacagcat aaaccttatc tattccagtc actttctttg
     2221 cgtaatctat tgtatttata attcct
//
LOCUS       DATIAS010000357         2567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_64394, whole genome shotgun sequence.
ACCESSION   DATIAS010000357 DATIAS010000000
VERSION     DATIAS010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64394"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..983
                     /locus_tag="VLA74_07225"
     CDS             282..983
                     /locus_tag="VLA74_07225"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmcI family methyltransferase"
                     /protein_id="HSF50533.1"
                     /translation="MINPRYNNNNANNVKRKKILDVLSEIEEIARKDYLPSIGPIKGK
                     IIGDIIKKHKPKRILEIGTLHGYSAILMANFLLSINNDDYDDNDNTTKEIIVICLEID
                     KNFTNIAKKNIEKAGLSDKIKVINGDALEIIPKLNNNNNHYRFDLIFIDAVKNQYLRY
                     LKLVEENDLMNKEAAAVVVVIADNVLIYENEMKDYLDYVRNSGLYNSYTTETTLEFTK
                     NVKDALEVSIRANLD"
     gene            complement(1377..2129)
                     /locus_tag="VLA74_07230"
     CDS             complement(1377..2129)
                     /locus_tag="VLA74_07230"
                     /inference="COORDINATES: protein motif:HMM:NF014180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSF50534.1"
                     /translation="MIISSSSEFFHLIEKTYSQSNVNNTNTNPVTTSPLPVLLIHGYI
                     EDVTVWNKWVDLLKKDGISSYPITFKQSDDKCGSAAEHAKELSNIIGQIKKETGQNKV
                     NIVAHSKGGLDVRVYLANNTKDVANLVMIGTPNAGSPLAESIEVGTPAVYDLRPGAAA
                     TEVKMNPNTKYYTIAGDWNHQLENYQLLTFFSFEQSGFSSLPIPNDGMVSVSSVESQD
                     YFINLGHSTNCHSNLMSEYEYKLAKDLILEKK"
     gene            complement(2306..>2567)
                     /locus_tag="VLA74_07235"
     CDS             complement(2306..>2567)
                     /locus_tag="VLA74_07235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50535.1"
                     /translation="DRSGVWDLYNPQRIAENYAIWVNNFTSYLLNASNLINNTLASNM
                     RVYNTALEQARDNLKTLTKTNTDYITSVNRRNTEINTTTSSP"
BASE COUNT          892 a          369 c          367 g          939 t
ORIGIN      
        1 tagtaagtta tttgtgtaaa ccaacactaa ttactttgtt ttattatcta tgaacaactt
       61 cattcagaag taaccaatcc aaagtaatca cttttacttt acattatata ctaccaaggt
      121 aattacaatg ctcttaacag agcctcttct aacaatttct tattaagata ctatatattc
      181 ttccaattac tttgtatgta tcaaatgata gttgtaatgc atcaatccat aagagaagaa
      241 acaaatctaa ataacttcat cattgttata tgtgaggttc tttgataaat cctagatata
      301 ataacaataa tgccaataat gtcaaaagga agaaaatatt agatgtttta tcagaaatag
      361 aagaaatagc aagaaaagat tatcttccgt caattggtcc gataaaagga aaaatcatag
      421 gagatatcat caagaagcat aaacctaaaa gaatactcga aattgggact ttacacggat
      481 attcagctat tttgatggca aattttctat taagtataaa taatgatgat tatgatgaca
      541 atgacaatac tactaaagaa attattgtta tctgtttgga aatagacaag aactttacaa
      601 atattgcaaa aaagaatata gagaaagcag gtctatcaga taaaataaaa gtaattaatg
      661 gtgacgcttt ggagattatt ccgaaactta ataataataa taatcattat agatttgact
      721 taatttttat agacgcagtc aaaaaccaat atctccgata ccttaaactt gtagaagaaa
      781 atgacttaat gaataaagaa gcagcagcag tagtagtagt aattgctgat aatgttttga
      841 tatacgaaaa cgaaatgaaa gattatttag attatgttag aaattctggt ctatacaata
      901 gttatacaac agaaactact ttagaattta ccaaaaatgt taaagatgct cttgaagtaa
      961 gtataagagc aaatttggac taggagggtt ctacttaaat cttaattatc ttttaacatt
     1021 aggattcatc tacatatatt cagctagatg gtcaggagta aagtcctgcc tgtagtaggg
     1081 ttccactaca ttatatttag cttttattat tagaaactta attttaacta tagaaaatta
     1141 gataaaaata gaaataaata tcaataaaaa ctgtactttt actaatttcc tattgaaaga
     1201 tatagattga tattaaattt aatcacttat tccaaaacaa attttacctg aaatattgac
     1261 ttataagtat tagtcatttc tctttcgttt agccattatc cctatttcta tattaataaa
     1321 aagaattgaa tatagtaatt gaatattgta ttctatcttt aatttctagt tattctttat
     1381 ttcttttcta atatcaaatc ttttgccaat ttgtattcat actcactcat tagattagaa
     1441 tgacaatttg tgctgtgtcc aagattaata aaataatctt gtgattctac acttgataca
     1501 gataccatgc cgtcattagg tatgggaaga gaagagaatc ctgactgttc aaaactaaaa
     1561 aatgtcaata gctgatagtt ttctaattga tgattccaat cacctgcaat agtatagtat
     1621 tttgtgtttg gattcatttt tacttcggta gctgctgcac caggtcttag atcatataca
     1681 gcaggagtac caacttcgat tgactctgct agaggagagc ctgcatttgg tgttccaatc
     1741 ataacaagat ttgcaacatc ctttgtattg ttagccaagt atactcttac atctaatcct
     1801 cccttgctat gagcaacaat attcacttta ttttgtccgg tttccttttt gatttgccca
     1861 attatattgg ataattcttt tgcatgttct gcagctgaac cacatttatc atctgattgt
     1921 ttgaatgtta taggataaga agaaatgcca tcttttttga gcaaatctac ccatttattc
     1981 caaacagtaa catcttctat atagccatgt attaaaagaa caggaagtgg agaagtggtt
     2041 acaggatttg tattagtatt atttacatta gattgactat acgtcttttc aattaaatgg
     2101 aaaaattcac tactactgct aattatcatt aacattgcaa ttaaattatg atgatttatt
     2161 taggtttttt tcttttgatt ctcttctccc tagattttga aatttttaaa gattatagtc
     2221 atcgttgttt agatcaacca ttatcgtata tgtgtctagt actctccctt atggtctttt
     2281 atatcctaga ataaaagatg tattgttaag gactactagt agtagtattt atctctgtat
     2341 tgcgtctatt aactgatgtt atataatcgg tatttgtttt tgttaaagtt tttagattat
     2401 cacgtgcttg ttcaagtgct gtgttatata ctctcatatt tgatgctaga gtgttattta
     2461 tgagattgct ggcatttaac aaataacttg taaagttatt tacccatatt gcataatttt
     2521 cagcaattct ttgtggatta tacaagtccc atactccact tctatct
//
LOCUS       DATIAS010000358         3508 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1018802, whole genome shotgun sequence.
ACCESSION   DATIAS010000358 DATIAS010000000
VERSION     DATIAS010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3508
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1018802"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VLA74_07240"
     CDS             complement(<1..184)
                     /locus_tag="VLA74_07240"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSF50536.1"
                     /translation="MYWISFIISSFLAICTAFSYAELSSIFPRSAAEYIYVKNSFGKL
                     SVSIFVGCLTIFVGTVS"
     gene            complement(129..311)
                     /locus_tag="VLA74_07245"
     CDS             complement(129..311)
                     /locus_tag="VLA74_07245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50537.1"
                     /translation="MTETAPALKRTINLFHAAIYGIGLILGAGIFVIIGDAAEIAGNL
                     LDIVYHFFFPCNMYCI"
     gene            488..634
                     /locus_tag="VLA74_07250"
     CDS             488..634
                     /locus_tag="VLA74_07250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50538.1"
                     /translation="MDEKIHGEYDSIDPIRSNYVNNLTSNKSNSFKEICRILKKMEKE
                     DDYF"
     gene            621..881
                     /locus_tag="VLA74_07255"
     CDS             621..881
                     /locus_tag="VLA74_07255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50539.1"
                     /translation="MIISDLVTTKEIRKGNTNDENWRSCTDGTLTKENYLQSIRDAGF
                     QNIQILNEKIYMKENHFSDRRKVISIIVKVITNYVNTIIEFP"
     gene            complement(1519..1644)
                     /locus_tag="VLA74_07260"
     CDS             complement(1519..1644)
                     /locus_tag="VLA74_07260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50540.1"
                     /translation="MGRKINPSILIITGDNNSAKERAGFIEVREFIQTKRNLNLQ"
     gene            1843..2106
                     /locus_tag="VLA74_07265"
     CDS             1843..2106
                     /locus_tag="VLA74_07265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50541.1"
                     /translation="MDLNILPRCCLGSLYNNNKNKNSKEYSTKTRLSFHKYKIKKKKT
                     NKPNQKYMVLEEKVDSIRETWTKLYFNKILRRFSSEDLWKMQT"
     gene            complement(2114..3133)
                     /gene="tfb"
                     /locus_tag="VLA74_07270"
     CDS             complement(2114..3133)
                     /gene="tfb"
                     /locus_tag="VLA74_07270"
                     /inference="COORDINATES: protein motif:HMM:NF012600.4"
                     /note="stabilizes TBP binding to an archaeal box-A
                     promoter; responsible for recruiting RNA polymerase II to
                     the pre-initiation complex; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription initiation factor IIB"
                     /protein_id="HSF50542.1"
                     /translation="MVVNEYYIVSANYTMDCINNILDFEINNNTSLCPICNNNFKITT
                     DAELGEIICDICGIVLSEEKKFPLHPRIYQEMIASNHANTTINTELQHYDRKSILCNI
                     EYSTIIGRSNVDAAGKKISDSIQNKIDRLRIWDHRTRYINSKDRNLKYAFDELNNIKH
                     KLGLSGAIVEKSFYFYKKASSLGLLQGRTTEGILCASIYLACKELETPKTMKEISDIT
                     NVKIKSISKYSRILIFELDLKTIPVINPIKCIVKIANNLSLEEKTKHKAIKLMKEIMK
                     QEIHVGKNPLAIAASTIYAVCKGLENEDKTQVEIAKSAGISAVVIRDRYNDIINKVDL
                     DQKII"
BASE COUNT         1251 a          470 c          501 g         1286 t
ORIGIN      
        1 ctgaaactgt accgacaaat attgttaaac aaccaacaaa tatagataca gataattttc
       61 caaaagagtt ttttacatat atatattctg ctgcacttct aggaaatatt gatgaaagtt
      121 ctgcataact aaatgcagta catattgcaa ggaaagaaga aatgataaac gatatccagt
      181 aaatttcctg ctatctctgc tgcatcacca attattacaa atattccagc acctaaaatt
      241 agaccaattc catagatagc agcatgaaat agatttattg tacgttttaa tgctggagca
      301 gtttcagtca tactttaaga acttaagaaa agcaagagtt taatatattt taaaagataa
      361 ttcttataat tttattaatc aaattttatt taatagaatt acaacattga tcataatgat
      421 gaattgtaat actttttact atttataatt agaataatta taatagtgta gaatttagaa
      481 aaggaggatg gacgagaaaa tccatggtga atatgattct atagatccta ttagaagtaa
      541 ttatgtaaat aatttgacgt caaacaagtc aaatagtttc aaagaaattt gtcgtatcct
      601 gaaaaagatg gaaaaggaag atgattattt ctgacctggt aacaactaaa gaaattagaa
      661 aaggtaatac caacgacgaa aactggcgta gttgtactga cggtacatta acaaaagaaa
      721 attatttgca aagtattaga gatgctggat ttcaaaatat tcagatatta aatgaaaaaa
      781 tctacatgaa ggaaaatcat tttagtgaca gaagaaaagt aatcagcata atagtgaagg
      841 taattacaaa ttacgtaaat acaataatag agtttccatg aaaaattttc tctcaaggaa
      901 gactaaatca attttataga atggaattta gaagatcaaa aagaacattc gatcgaaaaa
      961 gtaatggaaa ataagaaata aaataaaaaa gtttagagga acttgttgca aaaattacaa
     1021 ttattgatgg aggataaact agacaaaaac aaaaaatctt tcttgcagaa ctaattggaa
     1081 cttttttggt catagtattt gctaaaggtc tgtagtaact tgattcaaaa tacaatggaa
     1141 tactaggtct tctatttata gcatttgctc ctgctattgc tgttaatatt ggaatttacc
     1201 tttttggtga aatatcaatg cacattttaa tcctgcattt actttagcat ttttaattac
     1261 aaatcattta taaaggaaaa aaatttattt ttaacatatt tggcaggaga attaactggt
     1321 acattattgt gaagtgtttt cattttttct ttcattgaca atgaagtgaa tttcggtgca
     1381 aatgctccaa attacgttga ttatccaata tacgtgattg ttggcattga gatatagcat
     1441 ttgcattact tatgttagta atactgatag tagtctacac aaaaggtaca aaaaaagttg
     1501 gtagactagc aattggtcct attgtaggtt tagatttctt tttgtttgta taaattcccg
     1561 tacttctatg aatcctgctc gctctttggc actattgtta tctccggtta ttataagtat
     1621 agatggattt atctttctgc ccatttatat gaacttcgat agtagcatta ttgttatgca
     1681 ataatttaga caaaatatta aaacgtaaat ttggaataat atgttatgat tctaattttt
     1741 tagtttcatt taaaatataa tacgaattga agggatttaa aaaaatactc ttatttcgag
     1801 atattctttt atgttagatg gtagaacgcc caaatatact taatggattt gaatatcctt
     1861 cccagatgtt gtcttggaag tttatacaat aataataaaa ataagaatag caaagagtat
     1921 tcaacaaaaa ccagattgtc atttcacaag tataaaataa agaaaaagaa aacaaataaa
     1981 ccaaatcaga agtacatggt acttgaagaa aaagtagatt cgataagaga gacttggaca
     2041 aaattatatt ttaacaagat tttaagaaga ttttcatcag aagatctctg gaaaatgcaa
     2101 acataatatg tgactatata attttttgat ctaaatcaac tttattaatt atatcattat
     2161 atctatctct tattactact gcagatattc ctgcagattt tgctatttct acttgagttt
     2221 tatcttcatt ttctagacct ttacatactg catatattgt tgatgcagca attgctaatg
     2281 gattcttccc aacatggatt tcctgtttca ttatttcttt cattaatttt atggctttat
     2341 gttttgtttt ttcttctaaa ctaagattat tggcaatttt tacaatacat tttattggat
     2401 ttatgactgg aatggttttt aaatcaagtt caaaaataag aatcctagag tattttgaaa
     2461 tacttttaat tttcacatta gttatgtctg aaatctcttt catcgttttt ggagtttcaa
     2521 gttctttaca ggccaagtat atcgaggcgc ataagattcc ttctgttgtt cttccttgta
     2581 gtaatcctaa tgatgaggct tttttataaa aataaaaaga tttttctact atagcaccgg
     2641 ataaacccaa tttatgcttt atattattta attcgtcaaa agcatatttt aagttcctat
     2701 cctttgagtt aatgtaccta gttctatgat cccatatcct taatctatct attttatttt
     2761 gtatactatc gctaattttc ttccctgcgg catctacgtt agatcttcca atgatcgtac
     2821 tatattcaat attgcaaagg atactctttc tatcataatg ttgtaattct gtatttattg
     2881 ttgtattagc atgattagaa gcaatcatct cttgatagat ccttggatgt aaagggaatt
     2941 tcttttcttc agataatact ataccacaga tatcacaaat aatttcacct aattcagcgt
     3001 ctgtggttat tttaaaatta ttattacaaa ttgggcataa cgaagtattg ttattaattt
     3061 caaaatctag tatattattt atacagtcca tagtataatt agcactaaca atataatatt
     3121 cgtttactac catgattaga tcgtttgttc gattaactta aagataaatt acctccatca
     3181 agaaatgcaa ttttatttgt aattattgca ttatatttat agataaataa ctttccaatt
     3241 ctatacatgt cctagatcac attttatgtt cttgttgttg ttgttgttgt taatagatga
     3301 ataataatca tcaaaacatc ggttctattt gaaatactgc ttactcgttc tataatggtc
     3361 ttctaaagga gaatgcattc tgtgtttcgg gtataagttc aagattgcgg atatctagta
     3421 acatcatcag tgtagacagt atgtttttca tatttttcaa tcaaagaatg actaaaattc
     3481 tttgctacaa acattttctt ctcaaata
//
LOCUS       DATIAS010000359         3897 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1562674, whole genome shotgun sequence.
ACCESSION   DATIAS010000359 DATIAS010000000
VERSION     DATIAS010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1562674"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..626)
                     /locus_tag="VLA74_07275"
     CDS             complement(<1..626)
                     /locus_tag="VLA74_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSF50543.1"
                     /translation="MKLLEYQGKEIFSSYGIKIPKSRLARNVYEAIEAAKEIGFPLVL
                     KSQLTVGGRGKAGAILKCKTEEEINQKFQELMKKEVKGELPKSILLEEMEDIRKEFYL
                     SFFLNRTKRCYSIIASSQGGVEIESVKNRIIMDVPIDGITSDLASRVANDIGLVDNEK
                     IAFIEFIQKLSKLIYEKEAELAEINPLALLGDGTFVALDAKVILDDNA"
     gene            complement(1089..1283)
                     /locus_tag="VLA74_07280"
     CDS             complement(1089..1283)
                     /locus_tag="VLA74_07280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50544.1"
                     /translation="MEKLSLTSSPSAKPSVLSEGDEFYINAGPKGRRYHEKIVKPGRN
                     PGKEGSNSGSLEVHFSRIIK"
     gene            1818..2864
                     /locus_tag="VLA74_07285"
     CDS             1818..2864
                     /locus_tag="VLA74_07285"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HSF50545.1"
                     /translation="MDLEGRISLVLKGPTEEIITMGELRNLLQTVSRPRHYIGLEISG
                     KLHLGSLLLTGFKINDLIKANFHTTVFLADWHTFINNKLNSDWDKIQEISNYYKMAFD
                     FFCPGVNVVLGSNLYRSNDDYWKSFMNFCKQITLPRTIRSLTIMGRTEKDNLDFSQFL
                     YPAMQSTDIHSLDLDLVHAGTDQRKIHMLVREIFPKLKWKVPISLHHHLLPGLLEPTS
                     LGLTEDNKDDLKISSKMSKSKPTGSIFIHDDTTSIENKIKKAFCPIGISENNPVLEII
                     KYIIFREMEEFTLERPEKYGGNITYEEYPKLENDYVNKKIHPQDLKQSVAIYLDKVID
                     PIRRHFKNREPNFE"
     gene            complement(2959..3750)
                     /gene="cobJ"
                     /locus_tag="VLA74_07290"
     CDS             complement(2959..3750)
                     /gene="cobJ"
                     /locus_tag="VLA74_07290"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030789 - precorrin-3B
                     C17-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HSF50546.1"
                     /translation="MNGKLYVVGVGPGSHDHMTFRAKKVIEESQVIVGYETYVSLVED
                     LIQGKEVHRYAMTQEVDRANQAIRFAEDGKIVSLVSSGDPGIYGMIGLIYEILAEKGW
                     SREDGIYVECVPGVSSLNSCGALVGSPLMTDFAVVSMSDLLVPWEMIVKRVEAAAIGD
                     YVTVIYNPASKKRIHQLKDTRDIFLKHRSATTPVAIVKGAYRESQNIVITDLENMLGY
                     DEMIGMITTIIIGNSSTFNYKDMMINPRGYKSKYQLIKPSNIDST"
BASE COUNT         1279 a          701 c          536 g         1381 t
ORIGIN      
        1 aatgcattat catccagtat aacttttgca tcgagtgcta caaaagttcc atcaccaaga
       61 agcgctagcg gatttatttc tgccaattct gcttcctttt catagattaa ttttgacaat
      121 ttttgaataa attcaataaa agcaattttc tcattatcca caagtcctat atcattagca
      181 acacgggatg ccaagtcaga agttattcca tctattggaa catccattat tattctattc
      241 ttaacactct caatttctac tccaccttgc gaagatgcta ttatcgaata acatctcttg
      301 gtacggttaa gaaaaaatga caaatagaat tcttttctaa tgtcttccat ttcttccaaa
      361 agaattgatt tcggcaactc ccctttaacc tcttttttca ttaactcttg aaatttctga
      421 tttatttctt cttctgtttt acattttaaa attgcacctg cttttcctct tccccccacc
      481 gttaattgtg actttaatac aagaggaaaa ccaatttcct tcgctgcttc gattgcttcg
      541 tatacatttc gtgctaaacg agatttaggt attttaatac catatgaact aaaaatctcc
      601 tttccctgat attccaacag tttcattttt acactaggac aatattttta ggcttatatt
      661 cgtatttttt tactagtttt ttaaggatta tattaaattt tctttaaaag ctatattatt
      721 ttcttcataa attattgtta ttttaggaaa aaaattcaat atattaatat tttcattttt
      781 ttaagattgg tctcctaacc ccaaataata ctggttttcg tttataaata taatttgaat
      841 ctaataatct atttgctcat attctgaatg tttcaggtgc ttgtactaaa aatctccatg
      901 aattcctctt ctgttgtctt agttgtatta ttatgaatga attggaatac tttgcaatat
      961 atctgtaaat tgaatttgtt cacatccatt aagtttctta ttcatatctg gtacagatcg
     1021 ctttcaaatt cacaattata caggaacatc aaaatatgtc attgcattgc tttggtgaat
     1081 tcatgttatc atttgatgat ccgtgaaaaa tgtacctcta agcttccact gtttgagccc
     1141 tcttttcctg ggtttcttcc tggtttcact atcttctcat gatatcgcct tcccttcggc
     1201 ccagcattga tatagaattc atcaccttca gaaagaacac taggtttagc agaaggagat
     1261 gatgttaaag ataatttttc cataattttt ctgataaata gatagcatct tgaaattggt
     1321 ataactacct cacgcgatac atttcttata gaatatcaag gccacagtac aaagtacagg
     1381 catggtgcca aaaaccatat cttcaaagat gtatgtggat attgataatg aaatagagca
     1441 cctgattaat ggtacaccaa ctttcatgag gaagagatat ggttaaaata catactaatt
     1501 aggtattatg cgctttaacc tttcctgaaa catttgttaa cgagagtgaa cctatttatc
     1561 aggaagatta aattgtgcta aatctggttt taatcaattc agtcgggtga ttacataaag
     1621 tatctatccg gtgctatttg aggagataac attttatatt gtggataata atcggcatag
     1681 gtgtttctaa tgaactaaac tttaccgatt gtaaattgta ctcttaattc tattcattac
     1741 tcaaactgat tattgcaaaa tgtgcgattt taggatatga gcaaaaatta attactaata
     1801 ctttatcgta aggttatatg gatttagaag gacgaatttc tcttgtccta aaaggaccaa
     1861 cagaagaaat aattacaatg ggagagctaa gaaacttatt acaaacagtg tcaaggccta
     1921 gacattacat aggacttgaa atttctggca aacttcatct tggaagtctt ctcctcacag
     1981 gtttcaagat aaacgacctt atcaaagcga attttcatac aaccgtattt ttagctgatt
     2041 ggcacacatt cattaataat aaattgaata gtgattggga caagatccaa gaaatctcta
     2101 actattataa aatggccttt gatttcttct gtcctggagt gaatgttgta ttaggtagta
     2161 acttgtacag atccaacgat gattattgga aaagttttat gaatttttgt aagcagataa
     2221 ctttaccaag aacaattcgc tctttgacta tcatgggtag aacagagaaa gataacctcg
     2281 atttttcaca attcctctat ccagccatgc agtcaactga catccactct cttgatcttg
     2341 accttgttca tgcaggaacc gatcaaagaa aaatccacat gctagtaaga gaaatttttc
     2401 ctaaattaaa atggaaagtt cccattagtc ttcatcatca tttattgcct ggactcttgg
     2461 aacctacaag tctaggactt acagaagaca acaaagatga tctaaaaatt tctagtaaaa
     2521 tgagcaaaag taaaccaact ggaagtattt ttattcatga tgatacaaca agtatagaaa
     2581 ataagatcaa aaaagcattt tgtccgattg gaatttcaga aaataacccc gttctggaaa
     2641 taataaaata tattattttt agagagatgg aagaatttac attagaacgt cctgaaaagt
     2701 atggaggaaa tattacatat gaagaatatc ccaaattaga aaatgattat gttaacaaaa
     2761 aaattcatcc acaagacctg aaacaatctg tagcaattta tctcgataaa gtgatagatc
     2821 caataagaag acattttaaa aatcgtgaac caaattttga ataatcttta agatttagta
     2881 tttttgacca acattatttt taatggatat taaataaaaa tgatatatta ataattatta
     2941 aaacataata aaaggaaatt atgtagaatc gatatttgaa ggtttaatca attggtattt
     3001 tgatttatat cctctaggat ttatcatcat atctttataa ttaaaagttg aagaatttcc
     3061 gattattatt gtagtaatca ttcctatcat ctcatcatag cctaacatat tttctaaatc
     3121 agttattacg atattttgac tttctctgta agctcctttg acaattgcaa caggagtagt
     3181 agcacttctg tgttttagga aaatgtctct tgtatctttt aattgatgta ttctcttttt
     3241 actcgctggg ttataaatta cagtaacata gtcaccgata gctgctgctt ctactctttt
     3301 tactatcatt tcccacggta ctaataaatc actcatacta acgacagcaa aatctgtcat
     3361 caaaggcgat cctactagag ctccacatga attcaacgaa gacaccccag gaacacattc
     3421 cacataaata ccatcttctc ggctccatcc tttttcagct aaaatctcat atatcaaacc
     3481 tatcatccca taaattcctg gatctccaga tgatacaagt gacacaattt ttccatcttc
     3541 agcaaatctt atagcctgat ttgctctatc tacctcttgt gtcattgcat atctatgtac
     3601 ttccttacct tgaatcaagt cctcaactag tgatacataa gtctcatatc ccacaattac
     3661 ctgactttct tctattactt ttttagcgcg aaatgtcata tggtcatgac ttccaggtcc
     3721 tactcccaca acatataatt ttccattcaa ctaaattctt aattctacct acaattcaac
     3781 aaaatttatc tctttatgtg ttttcttgaa ttcacttgcc tataaattct tgatgtaaag
     3841 ctataacagc tttgttgcga tcgttttcgt ctattacaaa agctaaattc aattctg
//
LOCUS       DATIAS010000360         3317 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1428640, whole genome shotgun sequence.
ACCESSION   DATIAS010000360 DATIAS010000000
VERSION     DATIAS010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3317
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428640"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(369..926)
                     /locus_tag="VLA74_07295"
     CDS             complement(369..926)
                     /locus_tag="VLA74_07295"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSF50547.1"
                     /translation="MIGIGYNNLEAQEVVDNESENTSFPGIATPTAHVIIEGTDLDDK
                     LKGGSGDDTIDGGKGDDTLNGNEGDDKIDGGKGDDILEGGLGDDEINGDAGEDEIYGG
                     EGDDEIDGGKGDDILEGGPGKDQMSGGGGSDKFICDKKDKIKDFNSLENDRVSGNCKY
                     VDKGIIVPKIPKFPKNSFLGNSLFR"
     gene            complement(1654..2508)
                     /locus_tag="VLA74_07300"
     CDS             complement(1654..2508)
                     /locus_tag="VLA74_07300"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HSF50548.1"
                     /translation="MKKNSGNKSKLVLTDKWLIYSIIFIYIFITLVPLIWVFSTSLKS
                     NDVAVSLPPKILPSDPTIENYIFVITEPRLLHSLINSLLVSLGSTGLSVLISALGGYA
                     FARFKFRGKNILLSIVLGLFMIPVIINIIPLYLMLSQVGLLNSIFTLMITFQILIIPL
                     NIFLLKNYFETIPQELEEAALVDGCSRFGILRRIIIPLSTPGLAIASVLAFRFSWNEF
                     LLPIVLSNRPDSLVFQVALYQFISIYRIEWGYLTAGINIALIPIMVLMLLFQKQLIQG
                     LTVGSLKG"
     gene            complement(2505..>3317)
                     /locus_tag="VLA74_07305"
     CDS             complement(2505..>3317)
                     /locus_tag="VLA74_07305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HSF50549.1"
                     /translation="VFLLFPLIWNIYVSIHNVSILTILKDWEFVGLKNFIDLLTEPKF
                     YESLKLTLFFVGGSVLAQFTIGLVLAILLNQKIQGTNLFRMLLIIPWSISTVITAFSF
                     KFMYDDNFGILNYLLKQMGLDSVGWLSDPNIAIWSIVLTNIWYGTPFTILFLTAGLQS
                     INPLLYEAALIDGATKIKRFFFITIPLLRQFMVTNLILITVWSINFFDLQLIMTGGGP
                     LFSTTTISLYMYRQAFEFGSFSGGATIGIFLIIMNLLLTLTYIKIFNRRSEL"
BASE COUNT         1199 a          555 c          432 g         1131 t
ORIGIN      
        1 gggatagcta cgataattgt tactataaat aaaataacgg atgctataaa atacactctt
       61 ataaaataca tgtgatttaa tataaacact atattcttat tatactgaat tactaaaaaa
      121 ttgatctatc ttttaatatt gattctagca agcttgctta tttccgtaac ggcattaaat
      181 taataaatgt tattttatat ctttttcata ttgccatatt ctacttaaaa gagaaatagt
      241 gaaggcattt tatccaatta tcaaatgata aaaaagaatt aaaaaaattg atcaataact
      301 tcaggtcgac cattctagat aacgtataaa taaatcattt atatacattg aaaatcaaat
      361 aatggttatc acctaaataa tgagttacca agaaacgaat ttttaggaaa tttgggtatt
      421 tttggtacta ttattccttt atctacatat ttgcaattac ccgatacgcg gtcattttcc
      481 aaagaattaa aatctttgat tttgtctttt ttatcacata taaatttatc agatcctcca
      541 ccgccagaca tctgatcctt tccaggtcca ccttctagaa tatcatctcc tttacctccg
      601 tctatttcgt catctccttc tccaccgtaa atctcgtctt ctccagcgtc gccattaatt
      661 tcatcgtcac ccaatccacc ttctagaata tcatctcctt tacctccgtc tatcttgtca
      721 tctccctcat ttccattcag cgtatcatct cctttaccac catcaattgt atcatctccc
      781 gaaccacctt taagtttgtc atctagatcc gttccttcta ttataacatg tgctgttggt
      841 gtagcaatgc caggaaaact ggtattttcg gattcgttat ctactacttc ttgagcttct
      901 agattattat aacctatacc tatcaatatt attaatgaaa tgaggaaaag gtataacttc
      961 acagatatca attattttta tcgacatttt aataatggca ttcccattta aaataggtat
     1021 gttaaaatta ttctaaaaaa aatatcttaa gaatcttata tcactgttta tagtaactgt
     1081 tttccctaat ttaagattta atcatacatt ttccaataat gctaaatacg aaacgatcaa
     1141 ttttgtttct tattttattc aaaatattta aataaaaata ttaacaaaat aaatctgtga
     1201 acaaacattt ttgtatttgt gcaataaagt aaatattata ataaactttg taaaattata
     1261 cagtgttttt tttatttcat ttttcttttc aatgcattag attttatctt tttatatttt
     1321 taacaactcg atataaaatt gctgttatct catctctttc aataataaat tctacaaaca
     1381 ggattgaaaa attgataaaa agaaaaaaat ctcaagtatg gattaaatct aatttaaatt
     1441 ctcataatac ctaattacta tccttatatt aattaggtta aaattattca ataccagtat
     1501 ttttatcttt gatatttatt tgaaatcata atttttctaa atgaatgttt ttttattaat
     1561 tcgatcgtca attcgtatat tcccaacatt tgtgttaaca tattggttac ttccatttcc
     1621 ttttctcaaa taagacaaca atgagatttt ggtctatcct ttcaatgaac ctactgtaag
     1681 accttggatg agttgttttt gaaacaataa catcaacacc ataatgggta tcaacgctat
     1741 gttgattcca gcagtcaaat aaccccattc tattctgtaa atagaaataa attgatataa
     1801 tgctacctga aaaactagtg aatcaggtct atttgacaaa actattggaa gaagaaattc
     1861 gttccaggaa aatctaaaag ctaaaactga tgcaatagca agtcctggtg tagataatgg
     1921 tatgattatt cttctcagta ttccaaacct agaacatccg tctaccaggg cagcctcttc
     1981 tagctcctgt ggtatagttt caaaatagtt tttcaaaaga aagatgttaa gagggataat
     2041 caaaatctga aaagtaatca taagtgtaaa tatagagttt agtaatccta cttgtgataa
     2101 cataagatac aaaggaatta tatttatgat gacagggatc ataaaaagac caagcactat
     2161 acttaaaagt atgttctttc ctctaaattt gaacctggca aaagcataac ctcctaaggc
     2221 acttatgagc acacttagtc cagtactacc taaactaaca agcaagctat ttatcaaact
     2281 atgaagtaga cgcggttccg taattacaaa aatatagttt tcaatggttg gatcagaagg
     2341 gagaatcttt ggaggaagag agacagccac atcattagat tttaaagagg tagagaatac
     2401 ccatatgaga ggaaccaaag ttataaagat gtaaatgaat atgatagaat aaattagcca
     2461 tttatcagtc aaaactaatt ttgatttatt tccagaattc tttttcataa ctcgcttctc
     2521 ctattaaaaa tttttatgta agttaaagtt agaagcagat tcataattat caaaaaaatg
     2581 ccgatagttg ctccacccga gaacgaacca aattcaaaag cctgtctgta catgtatagt
     2641 gagatcgtgg tagtcgaaaa caacggaccg cctccagtca tgataagctg taaatcaaag
     2701 aaatttatac tccatactgt tataagaata agatttgtaa ccataaattg tcttaaaagt
     2761 gggatcgtta tgaaaaaaaa cctctttatc tttgttgctc catctattag tgcagcttca
     2821 taaagaagag gattaattga ctgaaggcct gcagtcaaaa acaaaatcgt gaagggagta
     2881 ccataccaaa tatttgttaa aactatagac caaattgcga tatttggatc cgaaagccat
     2941 ccaacagagt ccaatcccat ctgctttaat agataattca gaattccaaa attatcatca
     3001 tacatgaatt taaaagagaa agcagttatt acggttgaaa tactccatgg aattattaac
     3061 aacattctga agagattagt tccttgtatc ttttgattga gtaaaatagc tagaacaagt
     3121 cctatggtaa attgagctag aaccgaccca ccaacaaaaa ataaagttag ttttaaagat
     3181 tcataaaatt taggttctgt taaaaggtca ataaaatttt tcaatccaac aaattcccag
     3241 tcttttaaaa ttgtcaaaat cgacacatta tgaattgata cataaatatt ccatattaga
     3301 ggaaacaata agaatac
//
LOCUS       DATIAS010000361         2368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1563158, whole genome shotgun sequence.
ACCESSION   DATIAS010000361 DATIAS010000000
VERSION     DATIAS010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563158"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="VLA74_07310"
     CDS             <1..1033
                     /locus_tag="VLA74_07310"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSF50550.1"
                     /translation="TIYLIMNSSRLRIFKFFSIFLFVFPMILIVNISSFSVNALSDQI
                     ELKKILLIADENILKISPDNVFHPGGIYYNSMTFNGSIPGPTIEVDEGEVFQLTVRND
                     GDLVHSIDLHGINGPSQALSGSIPPGINKTIEVKAESPGVFVYHCDGDNLNGIWDHVA
                     SGMYGGLVIHSKNEPPAKEFFISFNEIYNNKDLGFFKGTNNTIGMFDINKFLNNTPDL
                     ILTNGMAYKYFPFMGTIAKITINENAELFNVKVGELTRWYIINAGPRNEITFNFAGGM
                     IDKVINGENKSLSNSSTVQNTYDIVIPPGSGKILETTFPEEGVYVGNDHDIGNFMKGA
                     GFVIYANKS"
     gene            1483..1728
                     /locus_tag="VLA74_07315"
     CDS             1483..1728
                     /locus_tag="VLA74_07315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50551.1"
                     /translation="MRQKKWDPFKHIKKGYKYYELLPSLYYPNQTYGALNKCWLGFVI
                     AKEKGEFDKLEIYARRIQKLERQLGIDITDFSNWGIE"
     gene            complement(1953..2276)
                     /locus_tag="VLA74_07320"
     CDS             complement(1953..2276)
                     /locus_tag="VLA74_07320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50552.1"
                     /translation="MKVKDIVGISAAMISGVFIFLSLAITNIDKTEREAIFHLDRQVL
                     VAYLVIASFSSSSVVAIIAQFKKSKPSNLRSFGKCINGDYANIIGYTFWDLFEYNHWH
                     IHFID"
BASE COUNT          881 a          303 c          382 g          802 t
ORIGIN      
        1 aacaatttat ctgataatga atagttctcg tttgaggatt tttaaatttt tttcgatttt
       61 cttgtttgtt tttcctatga ttttaattgt taatatttca tctttttccg ttaatgcttt
      121 atcagatcag atagaattaa aaaaaatcct tttaattgca gacgaaaata ttctcaaaat
      181 atctcctgat aatgtttttc atcctggggg tatctattat aattcaatga cttttaatgg
      241 ctcaatacct ggacctacta tagaagtaga tgaaggtgaa gtttttcaat tgacagttag
      301 aaacgatgga gatttggttc atagtattga tttacatgga ataaatggtc ctagtcaagc
      361 tttatctgga tctattccac caggaataaa caagacaata gaagtcaagg cagaatctcc
      421 tggtgtattt gtttatcatt gtgatggcga taatttgaat ggaatatggg atcatgttgc
      481 tagcggcatg tatgggggat tagtaattca ttcaaaaaat gaaccaccag ctaaagaatt
      541 ctttatttca tttaatgaga tttataataa taaggatctt ggattcttta aaggaactaa
      601 taatactatt ggaatgttcg atataaataa atttttgaat aatactccgg acttgatctt
      661 gactaatggt atggcctata aatattttcc atttatgggt acaatagcaa aaattactat
      721 taacgagaat gcagagttat tcaatgtaaa agtaggtgaa ttgacaaggt ggtatattat
      781 taatgcagga ccacgaaatg aaataacatt taactttgca ggaggaatga tagataaagt
      841 cattaatgga gagaataagt ctctttctaa ttcatctaca gtacaaaata catatgatat
      901 tgttattcca cctggttcag gaaaaatatt agaaacaaca ttccctgaag aaggagttta
      961 tgttgggaat gatcatgata ttggtaattt tatgaaagga gcaggttttg tgatctatgc
     1021 taacaaaagc taaataaatc gataacaata gcatcatgta cactattaca atcacataat
     1081 ataataatat aagtatatac agaaaaacat tattttattt ttgttaaaaa gttaatgtat
     1141 ttggatttaa acttcattca ttgtaaatta atagtattta ttataattgg tattgaatat
     1201 caataacatc atgagattat gcatataata tactacttaa ttaaatattt gattcttaaa
     1261 gtcatgaata tcatgacagt cattattttc aagatttgat acaataataa aattcttaat
     1321 tgaaaaacta tattagcaaa gtttataaaa taatattttc tatgatggac atatataaca
     1381 gctagctatt atcaaaaaat aaaaaaactt taaaatgatt ttattactaa gaattaatag
     1441 aatatgaggt atcacaagta ccgatatagc acagataaat ggatgcggca gaaaaaatgg
     1501 gacccattta aacatatcaa aaaaggttac aaatattatg agttattgcc atctctatat
     1561 tatcctaatc agacctatgg cgctttgaac aagtgctggc ttgggtttgt aatagcgaag
     1621 gaaaaaggag aatttgataa attggaaata tatgctagaa gaattcaaaa gctagaacgg
     1681 cagttgggaa tagatattac tgatttctcc aattggggaa ttgaataaaa ttaaatcctt
     1741 ctaaatctag aatgacgtca ttaggaacat taacacaact ttgagccatt gctttaatga
     1801 taataattgc tttttattat ttataaaaag tacgtatatt ccatgattag catggagaga
     1861 tgtggtttaa actcgttgct tgcattcacg ggtatccttc ttactaaaaa ataggatata
     1921 caaactaaaa ttgaagaatt gcaaataact aatcaatcta tgaaatgtat atgccaatga
     1981 ttatactcaa agagatccca gaaagtataa ccaattatat tagcataatc accattgata
     2041 catttaccaa acgatcgtag attagatggt tttgatttct taaactgggc tataatggca
     2101 acaactgaag aggatgagaa cgaagcaatt acaagatatg caaccaaaac ctgtctgtca
     2161 aggtgaaata tcgcttctct ttcagtttta tctatattgg tgattgcgag agaaaggaaa
     2221 ataaagactc cagagatcat ggcagcgcta attccaacta tatccttgac tttcaaagtg
     2281 aattaatttt tagcttttat ttagtacttg ttaaataata gtaaacactt gggcgccatt
     2341 aaataaatta caaattaatc ttaatcta
//
LOCUS       DATIAS010000362         8896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1973751, whole genome shotgun sequence.
ACCESSION   DATIAS010000362 DATIAS010000000
VERSION     DATIAS010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8896
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1973751"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VLA74_07325"
     CDS             <1..264
                     /locus_tag="VLA74_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSF50553.1"
                     /translation="KDVVFRLAPINGQDAKEMIESIKTIKLLKGVRGEEPSDLEGIEE
                     SLQRLSQLVTDFPEIEEFDMNPLLVLEKGKGVRAVDVRIGLRE"
     gene            complement(287..1177)
                     /locus_tag="VLA74_07330"
     CDS             complement(287..1177)
                     /locus_tag="VLA74_07330"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HSF50554.1"
                     /translation="MMAEDEDLKEKKLRGSGGFIIARVSESEQKKGNLGGPELFIAGI
                     GRLDKDRILKYYCNKCEKDYPKSPDIIYENPNEEVGEGVILVEKGEYKCASCKSTISQ
                     YRKFNKDEELIKKSPSSNEISKNKLKQENISSSSPGQENKKITSSKSSIEQKDLEIVQ
                     KTVKEEIKSSDVRILSDKYFPIESIIGMPIYDNEAMLVGNVKEIGLRKSSNGVIQITI
                     KVNNTKVISEDQTSNKNDEITWSNISKIGDIVLISHHQNNKLEVNNANNQTKPKICSS
                     CMNQNESDAIYCEDCGKKLS"
     gene            1478..1996
                     /locus_tag="VLA74_07335"
     CDS             1478..1996
                     /locus_tag="VLA74_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor"
                     /protein_id="HSF50555.1"
                     /translation="MTATDNEESFVKISNLIGGEEYQRVAKALLNTQDATDEEIASAT
                     GMRINIIRKVLYDMFGKALITGIRVKDEKKGWFVYRWRAKSDQVDNFIDNQKKKILER
                     LQKRLEYEESSEFYHCGNNECQRIKFDVAIESFFKCPACKGNLSMVDNNYTKEALRYK
                     IDQIMSEVSADK"
     gene            complement(2010..2675)
                     /locus_tag="VLA74_07340"
     CDS             complement(2010..2675)
                     /locus_tag="VLA74_07340"
                     /EC_number="1.1.1.302"
                     /inference="COORDINATES: protein motif:HMM:TIGR00227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone
                     5'-phosphate reductase"
                     /protein_id="HSF50556.1"
                     /translation="MILHSDLQIIINSAMTVDGKISSSTGDSKISSQEDLIRLHKLRS
                     NVDAIMVGINTVIIDDPMLNIRLSNSKKKLPTRIIIDSSGKIPLDSKILKSASFIDTL
                     IIVTKKTHADIIKNINSFGAKVFVIGTKSVDLPKLFDVLYKMGYKKILVEGGGELNWS
                     CLSSGLVTELILTISPKIIGGKNAITLVEGTGYPKISAGINLKLVRVIRNRNGEIVLH
                     YKL"
     gene            complement(2659..3951)
                     /locus_tag="VLA74_07345"
     CDS             complement(2659..3951)
                     /locus_tag="VLA74_07345"
                     /inference="COORDINATES: protein motif:HMM:NF005552.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSF50557.1"
                     /translation="MTILIKNISLLYGKDLTFIDHGFININNQGIILDVGSIDKYSFS
                     DENKATQVFDGEGFLVIPGLINAHTHIADSIGKDISMDFKFEEQIHPVYGIKRKILTN
                     SNQTHIKYFIRNSAISMIKKGIVTFIDFREGGVQGVQLLLDSLTGLPIKSVILGRIEY
                     YFDLKEIQMFGRQKDNKFYNPSIPSRILSSIRDLLKLSDGLGISGANENTDSALKQYR
                     STIRKFQEQYPKNRKIIAIHAAESKKTLDFSNKYTKKTEVERIITFLKPNILVHMTHA
                     SLNDLMLASKNKIGIVLCPRSNGILGNGIPDVMSMLKLGCKIAIGTDNIMVNSPDLLR
                     ELDYLWKVFKSPSPRYSTTVKLKELLKMITVNPGELFRLNSGSIDKGKFADLLFIDKF
                     HLDLQPIHNVYSSIIHRLPYDAIKSVMINGRFVNDITF"
     gene            complement(3948..4721)
                     /locus_tag="VLA74_07350"
     CDS             complement(3948..4721)
                     /locus_tag="VLA74_07350"
                     /EC_number="3.5.4.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase IIa"
                     /protein_id="HSF50558.1"
                     /translation="MTIQISILKIEGYGPWTLTLGSDREAQLQILQSQIYGDLQKLFS
                     KKNCLVFFNRFDEYFVVSNTLSIEDHVKIITEIYKMYPDLNLSISIGIGNTPIDANNG
                     AYKARKEKKILDSPFLIYCNSDNYLNSEKNNSDHRIKILHIDINNSSRIESRLSPYEV
                     TSQVMKIYVMLIDKFLKKKSLTFFLGGDNFMVLADDLKDSEICDLLDVIYDESAVNLN
                     CGIGSGTTSREAAKKATKSLDTIRKLRNEGKILNIYESL"
     gene            complement(4718..5179)
                     /gene="ribH"
                     /locus_tag="VLA74_07355"
     CDS             complement(4718..5179)
                     /gene="ribH"
                     /locus_tag="VLA74_07355"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HSF50559.1"
                     /translation="MFPIRIGIVVSEFNYDVTSNMLEEAKSQASKLGAIISYICYVPG
                     TFDMPIMISSLLKKPNVDAIVTLGAVIKGDTKHDIIVAENTARLLADLSLKYKKPILL
                     GISGPDMTLDQAWERVKIVPIRTVNAAVNMVTRLQKINEIDNLQNETIIIK"
     gene            complement(5188..5868)
                     /gene="ribB"
                     /locus_tag="VLA74_07360"
     CDS             complement(5188..5868)
                     /gene="ribB"
                     /locus_tag="VLA74_07360"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HSF50560.1"
                     /translation="MSAIDKAILALRQGKFVLVHDDKNRENEIDMIVAGENITPKHIA
                     TMRNDAGGLLCLAIDGLISKKLGLSYLHDIFNNTPSVNNLFLTMTNGRAPYGDKPSFS
                     ISVNHRKTYTGITDHDRALTISMLASACKNIDNGGISDFINNFRTPGHVPLLIAASGL
                     LKERFGHTELAVYLAKLAGITPVVAICEMLDSKTYGSLSIDEANIYSAKTGIPLLESN
                     QLKTYSVV"
     gene            complement(5925..6566)
                     /gene="ribE"
                     /locus_tag="VLA74_07365"
     CDS             complement(5925..6566)
                     /gene="ribE"
                     /locus_tag="VLA74_07365"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004746 - riboflavin synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HSF50561.1"
                     /translation="MINHILEMFTGIVESLCEVKSIKYLKNNIPKSSPEIKLTIDLKG
                     LGKGLKIGQSICVNGTCLTITNLRNGIAEFELVGETVKRTCLNLIKKGDKTNIERSMR
                     ASGRFDGHFVQGHVDCIGIIHDKIIFPTETKIVIEIPEEKKEMLSFIVSKGSIAIDGI
                     SLTVVDVTGLLFSISLIPHTLKNTTLGIKSIGDPVNIEFDIVGKYISKLLPKN"
     gene            6687..7517
                     /locus_tag="VLA74_07370"
     CDS             6687..7517
                     /locus_tag="VLA74_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50562.1"
                     /translation="MTIIIRKDSYFLDVLKKNLKKYYDSRRRLDNIIHISDILPSNCL
                     RKQYYTRKIPEKNILSDELIQHFIRGESSEFVISKLSNIGVTQNELKIEELVAHPDIM
                     NEEMIVELKDTTSHRRLDINDKKFRSYLRQLLYYLVISGLEKGIISIRYTNDELKFIK
                     SDLEGDYFFRPNKAKKQQIESWRVFLPKDDIIREILKNEMIRRKNLLLKAIVEDDVSI
                     LPRIPESKRGNICTKCEYFDMCMDIDDETKEAVDMSKELDVFDIKGIIDFKPIFDDGS
                     "
     gene            7704..>8896
                     /locus_tag="VLA74_07375"
     CDS             7704..>8896
                     /locus_tag="VLA74_07375"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HSF50563.1"
                     /translation="MDNVITKRGNHVVEKTSEFVYRINVNQSKKMNVPVTVYADDNLI
                     LKMSEDRTLDQAVNVSTLPGVRKHIVVLPDGHEGYGFPVGGVAATDLEEGVISPGGVG
                     YDINCGVRLLRSNLKVDNVRNQLKTLVNELFGSIPSGVGSEGTVKLNKSELNDLLVEG
                     VDWAIEHGYGLEQDAEVCEENGRMVGADPESISETARKRGAPQLGSLGSGNHFLEIQE
                     IQEIFDEKAAQVMGLEKGQLTVLIHCGSRGFGHQVCSDYLRYSEQAIKKYKIELIDRE
                     LACVPNNSPEGENYRKAMYCALNFAWSNRQMITHFTRRVFEKIFSMSETELDLKLVYD
                     VAHNIAKIERHRIDGEGMRDMVVHRKGATRAFPAGMDQIPSKYRGIGQPVIIPGSMGT
                     ASWIL"
BASE COUNT         3060 a         1316 c         1421 g         3099 t
ORIGIN      
        1 aaagacgttg tatttagatt ggcaccaata aatggtcaag atgctaaaga aatgatagaa
       61 tctataaaaa ctatcaaact tttaaaagga gtaagaggag aagagccatc ggatttagaa
      121 gggatagaag aaagtttaca acgcttatcc caattagtaa ctgactttcc agaaatagag
      181 gaatttgata tgaatccttt gctagtgtta gaaaagggca aaggcgtaag agcagttgat
      241 gtaaggatag gacttcgaga ataaaataag tttaaattaa attaaatcaa ctcaattttt
      301 tgccacaatc ttcacagtaa attgcgtctg attcattttg attcatacac gaactacata
      361 ttttaggttt cgtctgatta tttgcattat ttacttctaa tttattattt tgatgatgag
      421 aaatgagaac tatatcaccg attttagaaa tatttgacca tgttatttca tcatttttat
      481 tactggtttg atcttcagat attactttag tattattaac ttttattgtt atttgtataa
      541 ctccattgga agattttcta agaccaattt ctttaacatt tccaaccaac atagcctcat
      601 tatcatatat tggcataccg attatagatt cgattggaaa atatttatca cttaatatcc
      661 taacatctga tgattttatt tcttctttaa ctgtcttttg aactatttct aaatcctttt
      721 gttctattga cgattttgat gaagtaatct ttttgttttc ttgccctgga gatgaactag
      781 atatattttc ttgttttaat ttatttttag aaatttcgtt cgatgatgga gatttcttta
      841 tcaattcctc atctttatta aactttctat attgagatat tgtagattta caagatgcac
      901 atttgtattc acctttttct accaatatta caccctcacc gacctcttca tttggatttt
      961 cataaataat atcaggagat ttaggataat ccttttcaca tttgttacaa tagtatttta
     1021 aaattctatc tttatctaat ctcccaattc cagctataaa taattccggt cctccaaggt
     1081 ttcctttttt ctgttcactt tcggaaactc gtgctattat aaaacctcca gaaccacgta
     1141 gttttttctc ttttaaatct tcatcttcgg ccatcataat gggtaatagt tcgatcgaaa
     1201 aacgctcgta ttagtgtttg tataaattat atccaatttt aatatagacc agaatataat
     1261 tcattatgga cataaaaaga aaacttgtat attaaatact ttccattacc ataatacatt
     1321 tagattttat ttattaaatt aataataaat aataatgata taaaatcaac acaagaatga
     1381 aattattatt aatatttaaa caattaatgg atagttagca gttaccagtt taaaggttcg
     1441 gtatatatat aatacctaaa gtggatattt aatatagatg actgctacag ataacgaaga
     1501 atcttttgtt aaaatatcaa atttgatagg tggtgaagaa tatcagagag tagctaaagc
     1561 attattaaat acacaagatg ccacagatga agagatagct agcgcaactg gaatgagaat
     1621 taatatcatt agaaaggtgt tgtatgacat gttcggaaaa gctttgatca ctggtattcg
     1681 tgttaaggat gaaaaaaaag gatggtttgt ttatagatgg cgtgctaaaa gcgaccaagt
     1741 tgataatttt attgacaacc agaagaaaaa gatcttagaa agattacaaa aaagattaga
     1801 atacgaggag tcatcagaat tttatcattg tggaaataac gaatgtcaaa gaataaaatt
     1861 tgatgtagca atagaatcat tttttaagtg tcccgcatgt aaaggtaacc tttccatggt
     1921 agataataac tatacaaaag aagcattaag atataagata gatcagatta tgtctgaagt
     1981 ttctgcagat aaatagaaac tggtttaaat cataatttat aatgtaatac tatttctcca
     2041 ttacgatttc tgatcactct cacaagtttt agatttattc ctgcggagat ctttggatat
     2101 ccagtacctt ctaccaatgt tattgcgttt tttcctccta taatttttgg agatattgtt
     2161 aatattaatt cggtaacaag tccagatgaa agacatgacc aattaagttc tcctcctcct
     2221 tccaccaaaa tttttttata tcccatttta tataaaacat caaacaattt tggcaaatcc
     2281 actgattttg taccgatgac aaataccttt gcaccaaaag aattaatgtt ttttattata
     2341 tcagcatgag ttttttttgt tactattatg agagtatcta taaaagaagc actttttaga
     2401 atttttgaat ctaggggtat tttaccggaa ctgtcgatga taattcgtgt aggtaatttt
     2461 ttctttgaat tagataatct gatattaagc attggatcat ctattatcac agtgttaatt
     2521 cctaccataa ttgcatcgac attggaacgt aatttgtgta aacgaatcaa gtcttcttga
     2581 gaggaaattt tggagtcacc tgtagaagaa gagatttttc catctacagt cattgctgaa
     2641 ttaattatta tttgcaggtc agaatgtaat atcatttaca aatcttccat ttatcattac
     2701 tgatttaatt gcatcataag gaagacgatg tattatggaa gaataaacat tgtggattgg
     2761 ttgtagatcc aaatgaaatt tatcaataaa taacagatca gcaaattttc ctttatctat
     2821 tgatccagaa tttaacctaa aaagttctcc cggattgact gtaatcatct ttaataattc
     2881 tttcaattta acagtagtag aatatctcgg actcggtgat ttgaacactt tccacaaata
     2941 gtctaactcg cgtaaaagat caggagaatt aaccataata ttatcagtac caatagcaat
     3001 tttgcatccc aattttaaca tcgacatcac atcaggaatt ccatttccaa gaataccatt
     3061 agatctggga cataaaacta taccaatctt attttttgac gctagcataa gatcatttaa
     3121 acttgcatgt gtcatgtgaa ctaggatatt aggtttcaga aaggtaatta ttctctcaac
     3181 ttcagttttt ttagtatatt tgtttgagaa atccaaagtt tttttagatt cagcagcatg
     3241 aatggcaata atttttctgt tctttgggta ttgttcctga aattttctaa tagttgatcg
     3301 atattgtttg agagcggaat ctgtattttc gtttgctccg cttattccca agccatcact
     3361 taattttagt agatcacgga tagaagacag aatccttgat ggtatacttg gattatagaa
     3421 tttattgtct ttttgtcttc caaacatttg tatctctttt aaatcaaagt aatattctat
     3481 tcttcccaag attaccgatt ttattggcag accagttaaa gaatctaata gtaattgaac
     3541 tccctgtaca cccccttctc taaaatctat aaatgttact atgccttttt ttatcatgct
     3601 gattgcggaa tttcgaatga aatattttat atgtgtctga ttactatttg ttaatatctt
     3661 tcttttaatt ccataaactg gatgaatttg ctcttcaaat ttaaaatcca tcgatatatc
     3721 ttttcctatt gaatctgcaa tatgagtatg ggcattaatc aatccaggta taacaaggaa
     3781 tccttctcca tcaaaaacct gagtagcctt attttcatca ctaaatgaat acttatcaat
     3841 tgatcctaca tcaagaataa tcccttgatt attaatattt ataaatccgt gatcaataaa
     3901 cgttaaatct tttccataaa gtaagcttat gtttttaatt aatatagtca taatgattca
     3961 tagatattca gaattttacc ttcatttcgt aattttctta tagtatcaag tgattttgtt
     4021 gcttttttag cagcttctct tgatgtggtt ccagatccta ttccacaatt caaattcact
     4081 gcggattcgt cgtatataac atcaagtaaa tcacaaattt cagaatcctt caagtcatca
     4141 gcaagtacca taaaattgtc tccgcccaaa aagaaagtta atgatttttt tttgagaaat
     4201 ttatcgataa gcattacata tattttcatc acttgggaag taacttcata tggcgataat
     4261 ctagattcta ttcttgagga attatttata tcaatatgaa ggattttgat acgatgatca
     4321 ctattgtttt tctctgaatt caaataatta tcagaattgc aataaattaa aaaaggggaa
     4381 tcaagaattt ttttttcttt tctagcttta taggctccat tattagcatc tattggagtg
     4441 tttcctatcc ctatagaaat tgacaagttc agatctggat acattttata aatttctgta
     4501 attattttca catggtcctc gattgataaa gtattggaaa ctacaaaata ttcatcaaat
     4561 cgattaaaga atactaaaca attttttttt gaaaataatt tttgcagatc accatatatt
     4621 tgagattgaa gaatttgcaa ttgtgcttct ctatcactcc ctaaggttag agtccaagga
     4681 ccgtacccct caattttcaa gatggatatt tgaatagtca ttttatgata attgtttcat
     4741 tttgtaggtt atcaatttca ttgatttttt gtaatcttgt caccatattt actgcagcat
     4801 ttaccgttct tattgggact atttttactc tttcccaagc ttggtccagc gtcatatcag
     4861 gtccagaaat tccaagcaaa atcggctttt tatatttaag tgataaatct gctaaaagtc
     4921 tagcagtatt ttctgccact ataatatcat gtttagtatc tcccttgatg actgctccca
     4981 atgtaactat agcatcaaca ttaggtttct ttagtaaact gctgatcatt attggcatat
     5041 caaaagtacc aggaacataa catatgtagc ttataatcgc tcccaacttt gatgcttgag
     5101 atttagcttc ttctaacatg ttactagtaa catcataatt aaattctgaa actacgattc
     5161 ctattctgat aggaaacaat tctaaaatta aaccaccgaa tatgttttta attgattaga
     5221 ttctagcaag ggaataccgg tctttgccga atagatatta gcttcatcaa ttgataacga
     5281 tccgtaagtt ttagaatcaa gcatctcaca aattgcaaca acaggcgtaa ttccagcaag
     5341 ttttgccaag tatactgcaa gctcagtatg accaaatctt tcttttaata gacctgatgc
     5401 agcaattaga agagggacat gacctggtgt cctgaaatta ttaataaagt cagatattcc
     5461 accattatcg atatttttac aggctgacgc gagcatggat atggttaacg ccctatcgtg
     5521 atcggtgatt ccagtgtatg ttttacgatg attgacagaa attgaaaatg aaggtttatc
     5581 accgtatggt gcacgaccgt ttgtcatggt gagaaataaa ttatttacac taggagtatt
     5641 attgaaaata tcgtgtaaat acgataagcc taatttttta gatatcaaac cgtcgattgc
     5701 taaacatagc aaaccccccg catcatttct cattgttgct atatgttttg gtgtgatgtt
     5761 ttcaccagct acaatcatgt caatctcatt ttctcgattt ttatcatcat ggactagaac
     5821 aaacttgcct tgacgcaatg ctagtatagc tttatctatc gctgacaaac aataaataaa
     5881 taaaaccata tttattatat agtttactat gatttttgtt attactaatt ttttggtaat
     5941 agtttagata tatattttcc aacaatatca aattcaatat ttactggatc ccctatcgac
     6001 tttatgccca aggtagtatt ttttaaggtg tgagggatca atgagataga aaatagaaga
     6061 ccagttacat ctactacagt taagcttatt ccgtctattg cgatagaacc ttttgaaact
     6121 ataaatgaca gcatctcttt tttttcctct ggtatttcga taacaatttt tgtttctgta
     6181 ggaaatatta ttttatcatg aattattccg atacaatcaa catgaccctg aacaaaatgt
     6241 ccatcaaagc gaccagacgc tcgcatgctt ctttcaatgt ttgttttatc gcctttcttt
     6301 attaaattca aacaggttct ctttacagtt tcaccaacta attcgaattc tgcaatacca
     6361 ttacgaagat tagtaattgt taaacaggta ccgtttacac atatactttg acctattttt
     6421 agacctttac ctaatccttt aagatctatt gtaagtttga tttctggaga ggatttgggt
     6481 atgttatttt ttaaatattt aatagatttt acctcgcaca aagattcgac tatacctgta
     6541 aacatttcca aaatatgatt tatcaattat taataaaatt atatcgattt taaaaatgta
     6601 agttgattag aaaaatgaat atctttcttt tattaattca catcaaagat attttaaata
     6661 ttaaatgggt tgataataca tagaagttga cgataataat tagaaaggat tcttattttt
     6721 tagatgtttt gaaaaagaac ctcaaaaaat attatgattc cagaagaaga ttggataaca
     6781 ttattcatat atcagacata ttaccatcga attgtctaag aaaacaatac tataccagaa
     6841 aaattcccga gaagaatatc ttatcagacg aattaatcca acattttatc agaggagaat
     6901 ctagtgaatt tgtgatctca aaattgtcaa atattggtgt aacacaaaat gaattaaaaa
     6961 ttgaagaatt ggttgcacat ccagatataa tgaatgaaga aatgatcgtt gagttaaagg
     7021 atacaacaag tcatagacgc ttggacataa atgacaagaa atttaggtcg tatttaagac
     7081 aattactata ttacttggtt atctcggggt tagaaaaagg aattatttct atcagatata
     7141 cgaacgatga acttaagttt ataaaaagcg atctggaagg agattatttt tttagaccca
     7201 ataaagctaa gaaacagcaa atagaaagtt ggagagtttt cttaccaaag gatgacataa
     7261 ttagagagat attaaaaaat gagatgatta gaaggaagaa tttgttatta aaagcaattg
     7321 ttgaagatga tgtttcaata ttaccaagaa tacctgaatc aaaaagagga aatatatgta
     7381 ctaaatgtga atatttcgac atgtgtatgg atatagatga cgaaactaaa gaagcggtag
     7441 atatgtcaaa agaattagat gtatttgaca tcaaaggaat aatcgatttc aaacctattt
     7501 ttgacgatgg aagttaaaat aaataaaaaa aattaaagaa aaagataatt attaactcct
     7561 ttagaatata aaattggttt ctatattata aaattattca cctataatac ttttagaatc
     7621 gttgaaaagt ggatcatgtt agaatttggt tgaaaaaaca agcaagctta taatatcata
     7681 taactcaaaa ttaagaatat cttatggata atgttataac caaacgagga aatcatgtag
     7741 ttgaaaaaac tagtgaattt gtatatagaa taaatgtcaa ccaatcaaaa aaaatgaatg
     7801 ttccagttac agtttatgct gatgataatc taatattaaa aatgagtgaa gatagaaccc
     7861 ttgatcaggc tgtgaatgtt tcaactttac ccggagtaag aaaacatata gttgtattgc
     7921 cagatggaca tgaaggatat ggattcccag tagggggtgt tgcagctaca gatttagaag
     7981 aaggagtgat cagtcctggt ggagtaggat acgatatcaa ttgtggcgtt agattactta
     8041 gatccaattt aaaagtagat aatgttagaa accaactaaa gactcttgtc aatgaattgt
     8101 ttggttctat accttcggga gttggaagtg aaggtactgt taaactcaat aaatcagaat
     8161 taaatgactt gctagtcgaa ggagttgatt gggccattga acatggctat ggattagaac
     8221 aggatgcaga ggtatgtgaa gagaatggca gaatggtagg agccgatcct gaaagtattt
     8281 cagagacagc taggaaaagg ggagctcctc aattaggaag cttaggttct ggaaaccatt
     8341 ttcttgaaat acaagaaatt caagaaattt ttgatgagaa agctgcacaa gtaatgggac
     8401 ttgagaaagg acaattaaca gtattgatcc actgtggttc aagaggattt gggcaccaag
     8461 tttgtagcga ctatctcaga tattctgaac aagcaataaa gaaatataaa attgaactga
     8521 ttgatcgaga attagcgtgt gttccaaata attctccaga gggagaaaat tatagaaaag
     8581 cgatgtattg tgctctgaat tttgcttggt ccaatagaca aatgataact cattttacaa
     8641 gaagagtatt tgaaaagata ttttcaatgt ctgaaacaga attggatttg aagttggttt
     8701 atgatgtggc acataatata gccaaaatag agcgacacag aatagatggt gaaggaatga
     8761 gagatatggt tgttcacaga aagggtgcga ctagggcttt tccagcagga atggatcaaa
     8821 ttcctagtaa gtatcgcggt attgggcaac cagttataat acctggatct atgggaactg
     8881 caagttggat attatt
//
LOCUS       DATIAS010000363         4662 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1291279, whole genome shotgun sequence.
ACCESSION   DATIAS010000363 DATIAS010000000
VERSION     DATIAS010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4662
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1291279"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            879..1094
                     /locus_tag="VLA74_07380"
     CDS             879..1094
                     /locus_tag="VLA74_07380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50564.1"
                     /translation="MDLQTIIKQAHQEWKENPQKDKEEQEVISKYGKIFNPKNIDNLT
                     AKDFQHFLNYKNNKHWKSLERTGPEIT"
     gene            1119..1502
                     /locus_tag="VLA74_07385"
     CDS             1119..1502
                     /locus_tag="VLA74_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50565.1"
                     /translation="MKLLLDESVPIDERIKRIRDNKSSEYHKGFGSAYYTPILLVVYP
                     DKYPVINKIVKYALKKTNLYPDYNSKPEWIAYKEIIPKILELPEKNDIDEALIDERKE
                     DRMREADQVYKKQMGKAVFFNPGYD"
     gene            2169..2492
                     /locus_tag="VLA74_07390"
     CDS             2169..2492
                     /locus_tag="VLA74_07390"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HSF50566.1"
                     /translation="MKDTNLEYIKYNKVRLKEGSQKKVTEIFTEFFENIKGTVKGLKG
                     YAILEDIENDKETVVLTFWANREDMEKYYSKDKILSDLVEKVKPMFEQMPERSDYKIA
                     LFEID"
     gene            complement(2597..2986)
                     /locus_tag="VLA74_07395"
     CDS             complement(2597..2986)
                     /locus_tag="VLA74_07395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50567.1"
                     /translation="MPRFFRILSEGVFDIQDLKFRTYELAELIQKCSLHYKFDLRKTI
                     AVGFSNGANIAASILLHGILLLHPDIFQGAILFRVMVPLIPNPLPDLSLKKILLSAGV
                     NDPIASRTETEDLYNLLQKTNANITLK"
     gene            complement(2970..3155)
                     /locus_tag="VLA74_07400"
     CDS             complement(2970..3155)
                     /locus_tag="VLA74_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50568.1"
                     /translation="MPSNDGSNSNDQTTKKLTLVLFHGTSGNEEDLIFLGKEIEPTAS
                     ILSPRGKVLEWHDASFL"
     gene            3244..>4662
                     /locus_tag="VLA74_07405"
     CDS             3244..>4662
                     /locus_tag="VLA74_07405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50569.1"
                     /translation="MLEKSNISNKEIITTIILFVSILFTFQYLVSQFSDDNINNNAYA
                     ESAELIGNTSGNNAPTIDIFNLTTGYTIEPIVWNLTAPDSITFDDAGNMYIGEAGYPF
                     TNIPVVPRILKMEPNGNLSVFVDNKLNSPIVDIAFHDGLIYVSHRGKISTINTTNGQI
                     DDLIIGLHQNGDHGNNQIAFSPDGKRFFFGTGSATNSGVVGGDNFRWYSSIPGVPDVP
                     AKDVTLAGHNFETSNLLTAEKNDNATTGAFVPFNTPTTPGQVVKGQLKCTSCILSANL
                     DGTDLKLVGWGLRNPSGLAFNEDGRLFAANHGADERGSRPIANDNDQLFEIKLNETAF
                     YGWPDFLGNGEPVTDAKFQIKNLPPLQFVMQNHPPLEKPLVLLEPVHTAVIQMAFGNK
                     SFGFDGEAFVAQIGSHAPPPGTTVGQNVVHVNIDNKTVSDFISLKNPTTLFRPTDIEF
                     NKEGTAMYIVDWGNLREPGPGDT"
BASE COUNT         1734 a          649 c          719 g         1560 t
ORIGIN      
        1 atattttttc aaatcttgtc tttgatatta tactattcaa taagatatat catgctaata
       61 atactagcta atagctatcc tgatctaaaa ggtaatgcaa tatggtaaaa tattgtcagc
      121 atacttatga tagttggtat agaacagaag atgataaaaa aatttttcaa acgaaaaagt
      181 cgaacaagaa tttaaagcag ctgcaaagta tttagtagaa actctaaata attcatatat
      241 atagtcaatt aacatttaaa aacaattctt ttcaaaccta ttgtaatata tcttttgaat
      301 atcttcatcc agtgttattg agacagaatt atagttttta ttaaaatttt ttggtattat
      361 gaatgtcaat atttttaaaa acaatattaa taaaatttta ggctcttata ttataaatta
      421 ttaccttctg tttctataat tgactttttt gtatttaata gttgatgtgt ttctataata
      481 attatcttga gtattttgtt attttatata tcaacagatt cattacattt ttgtatcttt
      541 ctcagtggga tgtgaaacaa atttgaccta ttttttggtc ctatgataat tctattaatt
      601 tgaaccattt gataagtaga ctagttaatt tttaaatctc aaataaatta aattaaaaag
      661 gattttagat atacttctat aaaagtatta aaatttagaa gctcaaacaa ctaaaatagt
      721 agaatgctct ttatattatg ttctgttcaa gtctttaacg aatttttaga tttgttattc
      781 actctaattt aactgaacta atgttaaaaa ttactcttct taataacaat tagtataaac
      841 atattctttt tgtactggtg gtaataaaga gagttatatt ggatttacaa accattatca
      901 aacaagctca tcaagaatgg aaagaaaatc ctcaaaaaga taaggaagaa caagaagtaa
      961 tatcaaaata tggcaaaata tttaatccca aaaatattga taatcttact gcaaaagatt
     1021 ttcaacattt tctaaattat aaaaataata aacattggaa gagtcttgaa agaaccggtc
     1081 cagaaataac ttgagacata gaaaaattca aaaagacatt gaaattacta ctagatgaat
     1141 cagttcctat agatgaaaga attaaaagaa tacgtgataa taagagctca gaatatcata
     1201 aaggatttgg ttctgcctat tacactccaa tcttgctagt ggtgtatcca gataaatatc
     1261 cggtaataaa taaaattgta aaatacgctc ttaaaaaaac aaatctatat cctgattata
     1321 actctaagcc tgaatggata gcctataaag aaattattcc aaagatatta gaattaccag
     1381 aaaaaaatga tattgatgaa gcattaatag atgaaagaaa agaagacagg atgagagaag
     1441 cagaccaagt ctacaaaaaa caaatgggaa aggctgtttt ctttaatcct ggatatgatt
     1501 aatatttttt gttattaaat aattcagttt tatcttttat ttttatttct tttcttgtta
     1561 gcaactacaa atatatattt tatctactct tttcaaatct atatcatcat gattaccaat
     1621 cttgttttaa accaacaaga acaaccatca ttccgcataa tgaatagtac aacattttgt
     1681 tctataatta gtagagcaaa atacaagatg aagttattaa atgatggata ttctagagga
     1741 tacactcata ggaaacatat tcataaaagg cttcaatatt tgagccatct tgactggaag
     1801 aatggtgatc gcataaagtg cgacaaatgc aatcaaacta tagaattgaa ctctctccta
     1861 tttattcaca ggagacgaag ttacaataga ttctttcatg cataatgtgc tagcatttta
     1921 aatttaatat aactaataga tcaatcaatc tgaagaattt aaaaatctct actagttact
     1981 gatctcagat catgtcatat gcgaatccct aagctttgga ttttagttat ttggatttta
     2041 gttattgaac ccatttaatt gatgggacca agcagatatg aatcctctta caacaagaag
     2101 ctcagtttac ttaaaaaatc ataataaatg aattaacata tattaaaata attatattat
     2161 tatagatatt gaaggatact aatttagaat acataaagta taacaaagtt agactcaaag
     2221 aaggctcaca aaaaaaggtt acagaaattt ttacagaatt ttttgaaaat ataaagggaa
     2281 cagtcaaagg attaaaagga tatgcaattt tagaagatat agaaaatgat aaagaaactg
     2341 ttgttctaac cttttgggca aatagagaag atatggaaaa atactattct aaagataaga
     2401 ttttatctga tctagtagaa aaagtcaaac caatgtttga gcaaatgcca gaaagatcag
     2461 attataaaat agcattattt gaaattgatt aagttcttct cttaaattaa attaaataga
     2521 aatgtcaaaa ttatttgata tccatttttt ttgcaacgaa tatatcttct tgaactaaat
     2581 tgtgacttga ttacttctac tttaaagtta tgtttgcatt agttttttgc aataggttgt
     2641 agagatcttc tgtttcagtt ctagaggcta tgggatcatt tactcctgca gataacaata
     2701 tttttttgag tgaaaggtct ggtaaaggat taggaattaa gggaaccatt actctgaaaa
     2761 gaattgcacc ttgaaatata tctggatgca gaaggagtat accgtgaagg aggatactag
     2821 cagcaatatt agctccattt gaaaatccta ctgctattgt tttccttaag tcaaatttat
     2881 aatgtaaaga acacttctga ataagttcag caagttcata agttctaaat ttaagatctt
     2941 gtatatcaaa aacaccttct gatagtattc taaagaaacg aggcatcatg ccattccaat
     3001 acctttcctc tgggacttaa tattgatgca gttggttcta tttcctttcc aagaaagata
     3061 agatcctcct catttccact cgttccatgg aataaaacaa gtgttaattt cttggtggtt
     3121 tggtcattgc tgttagaacc atcattagaa ggcattgttt taaatttttg aatacaagtt
     3181 tttctaatat atactatata aaaaataact gttatataat atataactta tatacagtaa
     3241 cacatgttag agaaaagtaa tatatctaac aaagaaatta taactaccat aatactgttt
     3301 gtttcaatat tatttacttt tcaatactta gtttcacaat tttcagatga taatatcaat
     3361 aataatgcat atgcagaatc tgctgaatta attggtaata catcaggaaa taatgctcca
     3421 actatagata tatttaatct tactacaggc tatacgattg aaccaattgt ttggaatctt
     3481 acagctcctg atagtatcac atttgatgat gctggtaata tgtatatagg agaagcagga
     3541 tatccgttta caaatattcc tgtggtacct cgtattctaa aaatggaacc aaatggaaat
     3601 ctctcggtat ttgttgataa caaattgaat tctccaatcg tagatattgc atttcatgat
     3661 ggtttgatat atgtatctca tagaggcaaa atttcaacca taaacactac aaacggccaa
     3721 attgacgact taataattgg acttcaccaa aatggggatc atggtaataa tcaaatagca
     3781 tttagtcctg atggcaagag attctttttt ggaacaggaa gtgcgaccaa tagtggtgta
     3841 gtaggtggag ataatttccg ttggtatagt agtattcctg gtgtacctga tgtacccgca
     3901 aaggatgtaa cattagctgg acacaacttt gaaacatcaa atttacttac tgcagaaaag
     3961 aatgataatg caacaacagg agcatttgtt ccattcaata ctccaacaac gccaggccaa
     4021 gttgttaaag gtcaattgaa gtgtacttcg tgtattctaa gtgctaattt agatgggact
     4081 gatttaaaat tggtaggttg gggtttaaga aacccttcag gattagcatt taatgaagat
     4141 ggaagattat ttgcagctaa tcatggtgca gatgaaagag gaagtagacc aatagctaat
     4201 gataatgacc aattattcga gataaaattg aacgaaactg cattctatgg atggccagac
     4261 tttttgggaa atggagaacc agtaacagat gctaaattcc aaataaagaa tctaccaccg
     4321 ttgcaatttg ttatgcaaaa tcacccacct cttgagaaac ccctggtatt acttgaacct
     4381 gttcatacag cagttataca aatggcattt ggaaataaat catttggttt tgatggagag
     4441 gcctttgtag ctcagatagg gtctcatgct ccacctccag gaacaactgt aggccaaaat
     4501 gtagttcatg ttaatattga caacaagaca gtatcagact ttatttcatt gaagaatcct
     4561 acaacattat tcagacctac tgatattgaa tttaacaaag agggaactgc tatgtatata
     4621 gttgattggg gtaacttacg cgagccaggt ccaggtgata ct
//
LOCUS       DATIAS010000364         2758 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1019733, whole genome shotgun sequence.
ACCESSION   DATIAS010000364 DATIAS010000000
VERSION     DATIAS010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1019733"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..717)
                     /locus_tag="VLA74_07410"
     CDS             complement(196..717)
                     /locus_tag="VLA74_07410"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF50570.1"
                     /translation="MYKKILVPVDGSEPSNFALEHAINLAKQCKENNNTSFSSKINVI
                     ILYVIPEMPTSIGFLEGPMRSPKTGELVSFSDYVKEMYVLMKLNSEKKLTSLKNKYDY
                     LGIPIQTKVIADAKGSVVDNIIKYANEEKVDLIVIGNIGLGGISKVKALGSVSRNLAE
                     KAMCPVLIVHYTY"
     gene            complement(1422..2504)
                     /locus_tag="VLA74_07415"
     CDS             complement(1422..2504)
                     /locus_tag="VLA74_07415"
                     /inference="COORDINATES: protein motif:HMM:NF013003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSF50571.1"
                     /translation="MIRLSSTIKSRFVIDVIIAIGFLTSGIFLSPYISEWYDKNHGKT
                     LERLSGLLQSDKIQEFNDLRKQINVKIQFDEIDLSGKDLRGVNLKSLILNNVNLSNAN
                     LENANLENLKVSGDLSDTNMHNTYLFRADLSDTDISRANMTKANLTLTNLEKTFMVGS
                     KLIDSDLHNADLTDAYIASADLERVSLTSADLSNADLRNTSLTGANLAAADLTGSILF
                     DTDLTESIVVDTDLTGANLAAADLTGSILFRADLTGANLAAANLTYTYLTSADLTGAN
                     LDKADLTRAILFDTDLTDAYLIGTDLTESILFDTDLTDAYLTYVILEKTSFTCESINN
                     ANLNNSINLQKVRLFDSDMKEVSSCQ"
BASE COUNT          985 a          373 c          393 g         1007 t
ORIGIN      
        1 aatttgaatt tgctaaaaat agtatgttgt aatcaggatt ttcaaaaaaa gtagataatt
       61 tttatattat taaagttatt ttgaatatat aattaattga acctttgcat ataaaatctg
      121 gacgtacact gtaataagag agaaattttt tatatctcga ttttatgatt gattgcatat
      181 aactttttta aaaaactaat aagtataatg cactattaaa acaggacaca tagccttttc
      241 agcgaggttt cttgaaacac ttcctaatgc tttaacttta gaaatccctc ctaaacctat
      301 atttccaatt acaatcaagt ctactttttc ctcatttgca tatttaatta tattatccac
      361 tacagagccc ttagcatctg caataacttt tgtttgaata ggaattccta aatagtcata
      421 cttattttta agactagtta atttcttttc tgaatttaat ttcatcagta catacatttc
      481 cttgacataa tcggaaaatg atactaattc tcctgtttta ggagatcgca ttggcccttc
      541 taaaaatcct attgaagttg gcatttctgg aataacatat aatataatga cattaatttt
      601 actagagaaa gaagtattgt tattctcttt acattgttta gcaaggttaa ttgcatgttc
      661 taaagcaaaa tttgatggtt ctgacccatc aactggaact agaatttttt tatacatatc
      721 tataatacca accaatagta taaaaaaaga taattagatt gactgtaaaa ggttataaat
      781 aatatggaaa aataatatta taccactaat ctaaatgggt aaacagtcta tttatttttt
      841 gtgcattatc caaattagat cttattgtat atataataat aataataata attagatata
      901 atcttcagaa ttcaatagtt aatgattaat tggtaaaagg atctatttac tatatcatca
      961 taaatctcat tttaacatct ttagacttgt ctattataca gtgtaaatat gtttcttgaa
     1021 gaaataattt aatcaaaaat aggtttatta ttatgcatag actaataaat ttttatattt
     1081 agtaaggaaa ataaaaatat aatagatatt tgtcaaaata tagcaaaaga agcgtttaat
     1141 ggaaaggaag ttaagttgtt atgttatgag aaagatgaat cgaattgtca tagaaaatta
     1201 ataagaaaac tttgcgagga ggaattatta aaattaattt aagaggaata aatattaaaa
     1261 attagtttga taaacataag ctcgtttaaa agacgcttct gatatcagag atttgtgaat
     1321 tgcttttggc agtatatttt gtatctatat tataagacaa taagaaggga attgaatttt
     1381 aactttattt ctattcatcg gatgtagtaa tcaatagcat tttattggca actagagact
     1441 tctttcatat ctgaatcaaa gagacgaacc ttttgtagat ttatgctatt attaagatta
     1501 gcattgttta tactttcaca tgtaaaagaa gttttctcta atattacata tgtaagataa
     1561 gcatctgtaa gatctgtatc aaaaagaata gactctgtta ggtctgtacc aataagataa
     1621 gcatctgtaa gatctgtatc aaaaagaata gctcttgtca gatctgcctt atcaagatta
     1681 gctcctgtga gatctgcact agtaagataa gtatatgtta gatttgcagc agcaagatta
     1741 gctcctgtga gatctgcacg aaaaagaata gatccggtaa gatctgcagc agcaagatta
     1801 gctcctgtga gatctgtatc aacaacaata gattctgtaa gatctgtatc aaaaagaata
     1861 gatccggtaa gatctgcagc agcaagatta gctcctgtaa gacttgtatt acgcagatca
     1921 gcattagaaa gatcggcact agtaagacta actctttcta agtcggcact agcaatataa
     1981 gcatctgtaa ggtctgcatt atgaaggtca gaatctatca acttcgatcc aaccataaat
     2041 gttttttcca aatttgttaa agtcagatta gcttttgtca tattagctct agaaatgtca
     2101 gtatcggaaa gatcggctct aaaaagatat gtgttatgca tattagtatc agatagatct
     2161 cccgaaactt ttagattctc taagtttgca ttctctaggt tagcattaga tagattaaca
     2221 ttatttaaga ttaatgattt cagatttaca cctctaagat cttttccgga gagatctatt
     2281 tcatcaaact ggatcttgac attaatttgc tttcttaaat cgttaaactc ttgtatttta
     2341 tcactttgta atagtccaga caatctctct agagtttttc catgattttt atcataccat
     2401 tctgaaatat atggagacaa aaaaatacct gatgtaagga aaccaatggc tattataaca
     2461 tctatgacaa aacgactttt gatagtagat gatagacgaa tcaaaatatt gttttgcttt
     2521 tcatattcat agtgatatgt atttttcgag tttttttgag taataaatag taagacctta
     2581 acttttttct taaaaattta ttaatttaat acttttaata cttttaatcc tttttaatta
     2641 tgttctattt tatgtccata tcaataattg ttcaaaacta aaatgtccta ttgtagtgtg
     2701 tatcaaattc aattttatga tattgaaatt ttatcctttc tatcataagc ctcacggg
//
LOCUS       DATIAS010000365         5691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1563906, whole genome shotgun sequence.
ACCESSION   DATIAS010000365 DATIAS010000000
VERSION     DATIAS010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5691
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563906"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VLA74_07420"
     CDS             <1..277
                     /locus_tag="VLA74_07420"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSF50572.1"
                     /translation="FPNLSAYCASKFGVIGLTESIAKEVADNNIKVMAICPGGVDTNM
                     IKGIVNQGYNLSNRNLKKPQQVAQKIYDMIVNKKDYYNGQSIEFYNQ"
     gene            complement(437..1657)
                     /locus_tag="VLA74_07425"
     CDS             complement(437..1657)
                     /locus_tag="VLA74_07425"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSF50573.1"
                     /translation="MTLSGNNFTILAQQDLETIKYRNMVIDLGNGLNTNAQLTIPAVG
                     NGPFPGVLLVPGSGNVDMNETVGYVRIDNETGTKIYPPVRPFFQIAEYLSDRGFVTLR
                     YDKRGIGENNTILDSNIWGNVTSNDLKQDAEKALDVFIQQPELDHKRISIIGHSEGTI
                     IAPRVAIDNPDKVKNLVLMGAVAENFSKIGEFQVVSLPLLYAKEVLDHTHDGLLSLKE
                     ANENPIFSFWAGNLTLILTQNKQLNPKYNTNNDIYLDIDNELKPILLENFKSQSVVKS
                     GEKCTANNPCRIWIKSTYALPPNLDIIGNISSNTSILILQGENETQTPLQQAFLLQQK
                     LTDVGHPDHTLITYPNLGHIFYPSSQWITGVGPIEQYVLRDLYSWLESHSGMTSLPTL
                     IPSSYTSNTTKLNH"
     gene            2133..3221
                     /locus_tag="VLA74_07430"
     CDS             2133..3221
                     /locus_tag="VLA74_07430"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF50574.1"
                     /translation="MQANTTPSKIDEQKLNEFMQKAVGDIASTLSAMLLIIGDRLGLY
                     KAMTESGQQPITSEELARKTGTNERLVREWLANQAAGGYISYNSSDGKYTLPPEQAMA
                     LADENSPVYIHGAYQAIRSYFKDEDKLVEMFKTGKGLRWSEHHHDLFEGSALFFKPNY
                     VGNLVSSWIPSLDGVEEKLKQGGGKVADIGCGYGISTILMAKAYPNSKFYGFDNHGSS
                     IEQAKELAKKEGVTGNVEFYAVSANDESIGNNYDLITFFDCLHDMGDPVGAMKFAKQS
                     LKPEGTCMIIEPMANDKLEDNLNLVGRTFYAASTLVCVPNSLADNGPALGAQAGEKRI
                     KEIVEAAGFTKFRRATQTPFNIIYEAKP"
     gene            complement(3897..4154)
                     /locus_tag="VLA74_07435"
     CDS             complement(3897..4154)
                     /locus_tag="VLA74_07435"
                     /inference="COORDINATES: protein motif:HMM:NF013029.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17e"
                     /protein_id="HSF50575.1"
                     /translation="MDRIKRLSTELLDKYPDRFTTDFEENKKTLLSLAIIRSKVLRNR
                     MAGYITSKLRREADREKAKTSSQIEEEEKEEENIEENIEER"
     gene            complement(4233..4916)
                     /locus_tag="VLA74_07440"
     CDS             complement(4233..4916)
                     /locus_tag="VLA74_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50576.1"
                     /translation="MNFFQCPFEGKENSSNIENNKVKSKYLYKREDLFFLQRVAFAIE
                     QAISIFHETTRSNEIIYEVDFENDRVQEIHTNYYGEPYIWGCKDNVKEHLSKVKPISS
                     IKIIDEQDIYNILTNREKLEYLLLEYYKEQHQKQQELEEEQQILLNEDRRHNIIDFII
                     DNKDSIRVEDLKIYEPIYKCYRQKENCIICNSLSNIICINCNNYNKGIWLCADHWKQH
                     AIENHDQQW"
     gene            complement(5043..5423)
                     /locus_tag="VLA74_07445"
     CDS             complement(5043..5423)
                     /locus_tag="VLA74_07445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50577.1"
                     /translation="MKLDKTIKKLSNRLDTVYSCYSYSNELRHDGINYWKGKKIISAK
                     KWNELYEKNSTYTDNYRFTLISRKPLQYFPDDYNGAISPFGIIEELKEEAQKWNNDYY
                     ELLEYRKNPTLGRNKCSRCIFSTD"
     gene            complement(5410..>5691)
                     /locus_tag="VLA74_07450"
     CDS             complement(5410..>5691)
                     /locus_tag="VLA74_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50578.1"
                     /translation="KKLSQQFVFDLAKDLGFYYKSCIDTMNEIQQKCWNIYNNHDQIS
                     QKDRLLALKIIKETCESKFTLLEKGPSVMALNTLQERVEKIESSSNETR"
BASE COUNT         1906 a          822 c          908 g         2055 t
ORIGIN      
        1 ttttccaaac ttatctgcat attgtgcaag caaatttggt gtaataggtt taactgaaag
       61 tatagctaaa gaagttgctg ataataatat aaaggttatg gcaatatgtc ctggtggagt
      121 agatacaaat atgataaaag gtattgttaa tcagggatat aatttatcca atagaaattt
      181 gaagaaacct caacaagttg cacaaaagat ttatgacatg atagttaata aaaaagatta
      241 ctataacgga caatcaatag aattttataa tcaatgagaa tctttattaa atgattatat
      301 agtattatca ggtgtaacac cgatagcggt gcaaaataag agtctaatgc agatatatta
      361 ttatctaata tttagctttt attattggaa ctttttttaa aaaatttaag aaaaataaaa
      421 tttgtagaat ttagctttaa tgatttagtt tagtagtgtt tgatgtatag gaagatggga
      481 ttaaagttgg tagagatgtc attccagaat gagattcaag ccatgagtaa agatctctca
      541 aaacatactg ctctatcggg cctacaccag ttatccattg ggatgaagga tagaatatat
      601 gaccaaggtt tggatatgtt attaatgtat gatcgggatg tcctacatct gttagttttt
      661 gctgtaaaag aaacgcttgc tgtagtggag tttgtgtctc attctcgcct tgaagtatta
      721 aaatactcgt attagaagaa atgttgccga ttatatccaa attaggcggt aaagcatacg
      781 ttgattttat ccagattcga caaggattat tagctgtaca cttctctcct gatttcacaa
      841 ctgattgcga tttaaaattt tctaatagta tgggttttag ttcattatca atatctagat
      901 atatatcatt atttgtattg tatttgggat ttagttgttt attttgtgta agaattaggg
      961 taagatttcc agcccaaaag ctaaaaatag gattctcatt tgcttccttt agggacaata
     1021 atccatcatg tgtatggtct agtacctctt tagcatatag aagtggcagg cttactactt
     1081 ggaactcccc tattttactg aagttttctg ctactgctcc cataagtaca agattcttta
     1141 ctttatctgg attatcaatg gcaactcttg gagcaatgat tgtaccttcg ctatgtccaa
     1201 ttatacttat tctcttatga tctaattcag gttgttgtat aaaaacatcc agagcttttt
     1261 ctgcatcctg ttttagatcg ttagatgtta cattccccca aatattactg tccaaaattg
     1321 tattattttc acctatacct ctcttatcat atctaagcgt aacaaatcct cgatcagaaa
     1381 gatattcagc aatttgaaaa aatggtctaa caggtgggta tatttttgtg cctgtttcat
     1441 tgtcaatacg aacatatcct acagtttcgt tcatatctac attcccagat ccaggtacaa
     1501 gaagaacacc tggaaatgga ccatttccaa ctgcaggaat agtcaattgt gcgttggtgt
     1561 ttagaccatt gcctaaatca ataaccatgt ttctatattt tattgtctcc aagtcttgtt
     1621 gagcaagaat tgtaaaatta ttcccagata atgtcaaaga tatagaataa agagaaagag
     1681 aaagaaaaat tattgatatt attatcaata aacttttcaa tatagaattg tcatagcaga
     1741 attatataag catagtggaa tgttatgagt attttattat tccgtcagat gacatctgtt
     1801 acactctata aaagtaagaa gtgttacact agatgcagta taaacacgat ctagaaaaga
     1861 taagaagagg gtgtatgata cgcaacctga aagaagaagt gggatgcaag gtcatggata
     1921 tcttcaaata tatacacata ttcaaaagtc attggaagcc attcataaag agaaaattag
     1981 atagaaatag gtgaatccga gaaaagtacg gcccgtcggg agttgaatag tcctagtttc
     2041 attgttcatt atcataaagt attgacgtac tatcgttgtt ttttctttta aaaatttaaa
     2101 agactaaata ctatgtatta ttccataaca aaatgcaggc aaatactact cccagtaaaa
     2161 ttgatgaaca aaaactaaat gaatttatgc aaaaggctgt tggagacatt gcaagtactc
     2221 tgagtgcaat gcttttgatt attggagaca gacttggttt atacaaagcc atgacagaat
     2281 caggacaaca acctattaca tcagaagaat tagcaagaaa gactggtact aatgaaagac
     2341 ttgttagaga atggttagca aatcaagctg ctggaggata tatatcgtat aattcgtcag
     2401 atggaaaata tactcttcct cctgaacaag caatggcatt agcagatgag aacagtcctg
     2461 tatatatcca tggagcatat caagcaataa ggtcttattt taaagatgaa gataaacttg
     2521 tagaaatgtt taaaactgga aagggattga gatggagtga gcatcaccat gatctctttg
     2581 aaggtagtgc tctatttttt aaacctaatt atgttggaaa ccttgtgagt tcatggattc
     2641 cttcacttga tggagttgaa gaaaaactaa agcaaggagg aggtaaagtt gccgacattg
     2701 gatgcggata tggtatatca acaattctta tggccaaggc ttatcctaat tctaaatttt
     2761 atggttttga taaccacggc tcttctattg aacaagctaa agaactagca aaaaaagagg
     2821 gagtaacagg gaatgtagaa ttctatgcag tatcagcaaa cgatgaatca attggcaaca
     2881 attatgatct aattactttt tttgattgct tacatgatat gggtgatcct gtaggagcaa
     2941 tgaagtttgc aaagcaatct cttaaaccag aaggaacttg tatgataata gaaccaatgg
     3001 ctaatgacaa gttagaagat aatcttaatt tggtaggcag aacattttat gcagcatcta
     3061 ccctagtatg tgttccaaat tctttagcag ataacggacc tgcattagga gcccaggcag
     3121 gtgaaaagag aataaaagag atagtagaag cagctggatt tactaaattt agacgtgcaa
     3181 cccagacacc atttaatata atctatgagg caaaacctta gtcataaata tacctaataa
     3241 taataattct tttatttgga tttattgcag attatgaatc attgtgatta aaaataaaag
     3301 agtagtagat agtatcagaa aaaattttga atattgttaa tgaggctaat aaaattacta
     3361 tacatctatc aaattggtta ctcaaagaag aggaatggga aatgcatatg aattactgta
     3421 ggaaaatttt tgtaacctat ttaagaacca aagaaataga acaaaaagta attgatttat
     3481 tgtaagggag gattctcaag aatatttttg taagacacta ttacaagcct gattatacaa
     3541 tttttagtag aataagagaa atattagatg aactttgtac aattataatt caataacata
     3601 aataagataa acaaataaaa tccaaatatg taatgggccc gtcgggagtt gaatagtcat
     3661 ggtttcagtg ttcgatcaat caatattatt tgaatagaat ttacataaat ggtataaata
     3721 tttgtaaata ttattaatct aacataaaat atcaattttt attctatatt ttatttctag
     3781 atttgtgtcc aaaagattat acaatttaag agtggattgt gatttatcaa ttactatgga
     3841 gttttttcca atcgcatttt ctattccagc taatagtttt agcgtaatca aaatgattac
     3901 ctttcttcta tattttcttc tatattttct tcttcttttt cttcttcttc tatttgactt
     3961 gaggttttag ctttttctcg atcagcttct cgtcttaatt tagaagttat atatcctgcc
     4021 atcctgtttc ttaaaacttt agatcggatt atagccaaac ttaatagggt ttttttattt
     4081 tcttcaaaat ctgtagtgaa tctatctgga tatttatcta atagttctgt ggataatctc
     4141 tttatgcgat ccatatctat aaattataaa aagaatattt tatgtttgtg ctcattcgaa
     4201 tagtttaacc ttttgtagat attatgattt atttaccatt gttgatcgtg attctctatt
     4261 gcatgttgtt tccaatgatc agcacataac cagattcctt tattatagtt attacaattt
     4321 atacaaataa tattggataa gctattacaa ataatacagt tctctttctg tctatagcac
     4381 ttatagattg gttcgtaaat cttcaaatct tcaactctaa ttgaatcttt attatctata
     4441 ataaaatcaa taatattgtg tcttctatct tcattcagta gtatttgttg ttcttcttct
     4501 aactcttgtt gtttctgatg ttgttcctta taatactcta ataataaata ttctaatttt
     4561 tccctatttg ttaaaatgtt atagatatcc tgttcatcta ttatttttat agaggaaatt
     4621 ggtttaactt tagataaatg ctcctttaca ttgtccttgc atccccaaat atatggttct
     4681 ccataataat tggtatgaat ctcttgaact ctatcattct caaaatccac ttcatatata
     4741 atttcattac ttctggtagt ttcatgaaat atagatatag cctgttcaat tgcaaatgct
     4801 actctttgta agaaaaatag atcttctctt ttgtatagat attttgattt tactttatta
     4861 ttttcgatat tactgctatt ttctttacct tcgaacggac attgaaagaa gttcatgact
     4921 ttgcatggat acgaaattaa attattattg atattgctaa tataattaag attattatta
     4981 ttgcaatgat tgcttacaat actagctact acttttccta ttccaaaaaa aagtgggtca
     5041 tcttaatcag ttgaaaatat acacctacta catttgtttc tccccagagt aggatttttt
     5101 ctatattcaa gtaattcata ataatcatta ttccattttt gagcctcttc ttttagttct
     5161 tctattattc caaatggaga tatagcgcca ttgtaatcat ctggaaagta ttgtaatggt
     5221 tttcttgata ttagagtaaa tctgtaatta tctgtatatg tagaattctt ttcataaagt
     5281 tcattccatt tctttgctga tattatcttt ttacctttcc agtaattgat tccatcatgt
     5341 ctcagttcat tactatacga ataacatgaa taaacagtat caagtctatt tgataacttc
     5401 ttaatagttt tatctagttt cattacttga tgattcgatt ttctcaactc gttcctgtaa
     5461 ggtgtttaga gccataactg atggcccctt ttccaataat gtaaatttag attcacatgt
     5521 ttctttaatt atttttaatg ctagcagtcg atctttttga gaaatttggt catgattatt
     5581 gtaaatgttc caacattttt gttgaatttc attcattgta tcaatgcaac tcttgtaata
     5641 gaatcccaaa tctttagcta aatcaaatac aaattgttgt gatagcttct t
//
LOCUS       DATIAS010000366         4059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1564072, whole genome shotgun sequence.
ACCESSION   DATIAS010000366 DATIAS010000000
VERSION     DATIAS010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1564072"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..2389)
                     /locus_tag="VLA74_07455"
     CDS             complement(125..2389)
                     /locus_tag="VLA74_07455"
                     /inference="COORDINATES: protein motif:HMM:NF012704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50579.1"
                     /translation="MTTHDSNNIINKGTSFYFINLELGKKLQDEEIINSFVKDKKTNC
                     IKIELNHKYEYNTVIIPINGNNWLKFLESVEKRLKDKGIGISNEHVRLIKNVLDDNHE
                     IIVGISDTLRDQTFKNTYNNEHKNELDQQQQDQQLQCQGEQEHTKDDDNTISSLIENN
                     SVSQALRMHSEDVKIKGTIIGISRLFKMICKVSLYCGSCQITTECDFNPFPLFNTANL
                     GKICEVCNKLIRNDNANSIEYKNAVIVELQGMETFNDMDHLSVFLFDSDTEGITVGES
                     AIIKGKIHIMSERYKRQFPYLYAESIKYLNKENLTLTKLDIEAIKRFLRIKGSSSIIE
                     ALVSIFDPSIVGYEHVKKGLLMSAVNTSETASKKEKIHELLIGDPGLGKSKLVKRATE
                     LVHNSNNVSAQNASGKSLTAIIDKIDENTFLRLGPVPQARGANCGLNEIGRMGLEDQG
                     HLLDVMEEEEFTKTAYGFHTKIQSPTTIIASANPINNSKWKDSDKIDLNEFPVLEPIF
                     DRFDLKFAFRTIKDHKEIKAFGKKYSEILAKKAKRQLPDYTPFLVKYIEYARQLKPIL
                     NEEAITMLEEFYINIKIKGFGSERVLPTLHKLAKAIARLKLKTIADEEDAKEVMEFYN
                     VMLVDFQKSVVVSQSPRDLAYNECVSILEQIRGFRGITLEDLFKKVCESNEQLANYFE
                     YDEKPLRIKNNRKVRNVYEMLLNHSNIKKVQEKPIVLQWLDPTPSTKTEESIITATMT
                     AVTEDQKASDLRVM"
     gene            complement(2716..2856)
                     /locus_tag="VLA74_07460"
     CDS             complement(2716..2856)
                     /locus_tag="VLA74_07460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50580.1"
                     /translation="MTKVIRVKEETFEQLIRQGKWSDTMDTIVSGLLKKVGNIEKEEN
                     LS"
     gene            2909..3946
                     /locus_tag="VLA74_07465"
     CDS             2909..3946
                     /locus_tag="VLA74_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50581.1"
                     /translation="MRDYNANIENCIAKLLYQTNKDLGYREVKRIIESPHYLNKTISR
                     DVYDYHIKKMREREELLPKNKKLKRGQKNPLKLSNKTIEEIRLGIYNINTINKNHYFS
                     QSEFTENEKRKFAYQFLLYSMAQPNNVILVRDNDGIIKVSLKKFIRLHRGSGEFFSNL
                     SYSVNLIKYSIKLLHKEKIIEIFKKETDELFNFIDKRLIDFVKDCQMVFDNLILIRMY
                     IQWQNIKKPSKNERNWFELIYGKRTANNKFKKTWFNLQNKKSSSNYNSKYKRGKIETI
                     RNFDVTILKTLKNIEIQYKDIKSKYPSIFAIIIETICPKFYSDHLEQCYRKTMEQGIK
                     IPEIKTVSLKE"
BASE COUNT         1340 a          652 c          542 g         1525 t
ORIGIN      
        1 aacaattcta cctttagaaa tgaaccagat attggaaaag cagtatctga ctggacatac
       61 aactacaatg agaaacatgg tagaaggata actgatattt tacagatagg agtaatgagt
      121 atgactacat aactcttaag tcacttgctt tctggtcttc tgttactgct gtcattgttg
      181 ctgttattat tgattcttct gtttttgttg atggtgtcgg atctaaccat tgcaatacta
      241 taggtttttc ctgaactttt ttaatgtttg aatgatttaa taacatctca tacacattac
      301 gcacttttct attgttttta atcctcaatg gcttttcatc atattcaaaa taatttgcta
      361 gttgctcatt actttcacat acttttttaa ataaatcttc taacgtaatt cctctaaaac
      421 ccctgatctg ttcaagtatt gatacacatt cattatatgc caagtctctg ggtgattgtg
      481 atacaactac actcttttga aaatcaacaa gcattacatt ataaaattcc atcacttctt
      541 tagcatcttc ttcatctgca attgttttta atttaagtct ggcaattgct ttggctagct
      601 tatggagtgt aggtagaact ctctcagatc caaaaccctt gatttttata tttatgtaaa
      661 actcttcaag cattgttatt gcttcttcat ttaatatggg ttttagctgt ctagcatact
      721 caatatattt aaccaaaaat ggagtataat ctggtaattg tctttttgct tttttagcta
      781 atatttcact atattttttt ccaaaagctt tgatttcctt gtggtctttt atagttctga
      841 aagcaaattt caaatcaaat ctatcaaaga ttggttctaa tactggaaat tcatttaaat
      901 ctattttatc gctatccttc catttagaat tgtttattgg atttgctgaa gctattatgg
      961 tagtgggtga ctgtattttt gtatggaaac cgtaagcagt tttggtaaac tcctcctctt
     1021 ccatgacatc caaaagatga ccctgatctt ccagtcccat tcttccaatc tcgttcagac
     1081 cacaattagc ccctcttgcc tgaggcaccg gaccaagtct caaaaatgta ttttcatcta
     1141 ttttatcaat aatagcagtt aaactcttac cagatgcatt ttgagcactt acattgttgc
     1201 tattatgaac taattcagta gcccttttta ctagtttgga tttacccaaa ccgggatcgc
     1261 ctatcaataa ttcgtgtatt ttttcctttt ttgatgcagt ttctgatgtg tttacagcag
     1321 acattaataa tccttttttt acatgttcat atccaactat agaaggatcg aatattgaaa
     1381 caagtgcttc tattatactg ctacttcctt ttattcttag aaatcgtttg attgcttcta
     1441 tatcgagttt tgttaaagtt agattttctt tgtttagata cttgattgat tcagcataga
     1501 gatatggaaa ttgtcgcttg tatctttcgc tcataatatg tatttttccc tttatgatcg
     1561 ctgattctcc tacagttatg ccttcagtat cactgtcaaa tagaaatacc gacagatgat
     1621 ccatatcatt aaaagtctcc ataccctgca attctacaat aacagcattc ttgtactcaa
     1681 tagaatttgc attatcattt cttatcagtt tattacatac ttcgcatatt ttacctaaat
     1741 ttgcagtatt gaaaagtgga aatggattaa agtcacattc ggtagtaatc tgacaggaac
     1801 cacagtaaag tgaaaccttg catatcattt tgaagagcct ggatattcct attatcgttc
     1861 ctttaatttt cacatcctcg gaatgcattc tgagtgcctg tgatacagag ttattctcaa
     1921 ttagagatga tatagtatta tcgtcatctt tagtatgttc ttgttctcct tgacattgta
     1981 gttgttggtc ttgttgttgt tggtctaact cattcttatg ttcattatta taagtattct
     2041 tgaatgtttg gtcacgtagg gtatcactta taccaacaat aatttcatga ttatcatcca
     2101 aaacattttt tataagtcta acatgttcat tgctgattcc tatgccttta tctttcagtc
     2161 ttttttctac cgattctaaa aattttagcc aattgtttcc attaattgga ataataactg
     2221 tattgtattc atatttatgg ttaagttcta ttttaataca attggttttt ttatctttga
     2281 caaaactgtt aattatttcc tcatcttgta gttttttacc aagttctaaa ttgataaagt
     2341 aaaaagaagt tcctttgttg attatattat tcgaatcatg agttgtcatg gcgaaaaact
     2401 taaacaatta caatctttct cattacatcg atttaaaccg ctgtgagaat ttctatcatg
     2461 gccacaccaa caaatgttaa ttaggatgaa agtttcctca ttaacaaaag aacgtttatt
     2521 attcttcatt ttcttctcct tcaaacttat ataaacaatt atcgcatatt gaaagaatga
     2581 tttttcctaa ttttcctgca cttacctcaa tcttttttgt tgatttctca tagcatccaa
     2641 atgcttcaca gataggatta ttagtatctt tatctaaata atgaataggt tctattccaa
     2701 actccttttt tctatttaag atagattctc ctccttttct atatttccaa cttttttcaa
     2761 taatcctgaa acaattgtgt ccatcgtatc agaccatttt ccttgtctga ttagttgttc
     2821 aaaagtttct tctttaactc ttattacttt agtcatagat atactatata ttaacaaata
     2881 aattagatta atccgtgtca cttttattat gagagactat aacgctaata ttgaaaactg
     2941 cattgccaag ttattgtatc aaacaaacaa ggacttagga tatagagaag ttaaaagaat
     3001 tatagaatct cctcattatc tcaacaaaac catatctaga gatgtttatg attaccatat
     3061 caaaaaaatg agggaacgtg aagaactatt gccaaaaaat aaaaaattga aaagaggtca
     3121 aaaaaatcct ttaaaattaa gtaacaaaac aatcgaagaa ataagattag gaatttataa
     3181 tattaatact atcaataaaa accattattt ttcacaatca gaatttacag aaaacgagaa
     3241 acgaaaattt gcataccagt ttttgcttta cagcatggct caaccaaata atgttatttt
     3301 agtcagagat aacgacggta ttatcaaggt ctcgttaaaa aaatttatta gattacacag
     3361 aggcagtgga gaattctttt ctaacctttc ctatagtgtt aatctaatta aatactcaat
     3421 taagttgtta cataaggaaa aaataattga aatttttaaa aaagaaacgg atgaattatt
     3481 caatttcatt gataaaagat taatagattt tgtcaaagat tgtcaaatgg tatttgataa
     3541 tctaattctg ataagaatgt atattcaatg gcaaaatatt aaaaaacctt ctaaaaatga
     3601 aagaaattgg tttgaactca tatatggaaa aagaactgca aataacaaat tcaagaaaac
     3661 atggttcaat cttcagaata aaaaatcatc atctaattac aattctaaat ataaaagagg
     3721 taaaatagaa actatcagaa atttcgatgt tactatttta aaaactctta aaaatattga
     3781 aattcaatat aaagatataa aatctaaata tcctagtatc tttgcaatta taattgaaac
     3841 aatatgtcca aaattttata gcgatcattt ggaacaatgt tataggaaaa caatggaaca
     3901 gggtattaaa atacctgaaa ttaaaactgt gtcactcaaa gagtaattct ataacagtta
     3961 ttggcatact aaattgttat ttattaaact ataaataaaa tcaattttta gcgaggaatt
     4021 tctctggttt aataaacgca attttaggat tttgttgta
//
LOCUS       DATIAS010000367         4660 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_66436, whole genome shotgun sequence.
ACCESSION   DATIAS010000367 DATIAS010000000
VERSION     DATIAS010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4660
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66436"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1016
                     /locus_tag="VLA74_07470"
     CDS             141..1016
                     /locus_tag="VLA74_07470"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSF50582.1"
                     /translation="MSESSSPSLAFQEGKNAAWLSMWTLLAIGIAELLVSFYTTSLTL
                     LADGLDSMADALISFIVWFGIYMIQKPKNRLFQYGYAKVESFAAFVAAVVVIILGLFI
                     IYSAYERIVHPVETTYPEITMITLLAAGIISLHRAFRVHKIAKKYNLISLKLDAKNSI
                     KDGSASFVGFGSVLAGYFGIPYMDSIGSIIIAGYIFFMAYVALKESTFVLLDAVASPQ
                     LSDNIKNFVEKNFSVPVSKVLLRPLGYSFDIEVHIKLDPNSTLKDSHEIVKVIRTAII
                     KKFKNAEVLVIPYPM"
     gene            complement(1045..1212)
                     /locus_tag="VLA74_07475"
     CDS             complement(1045..1212)
                     /locus_tag="VLA74_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50583.1"
                     /translation="MKHILSFDESKVVLLISTVLAVLTTINEIKLMKTIQIFEIYIPQ
                     IYLFDKVGNVT"
     gene            1445..1753
                     /locus_tag="VLA74_07480"
     CDS             1445..1753
                     /locus_tag="VLA74_07480"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HSF50584.1"
                     /translation="MLTFSIELDLFGVLVLSSVGFIISFIGGMVGLVLGSIRLPVMIK
                     ILKTEPKIAVGTNMVTSAIMGTFGFIGHVVSNEVNLFNYFRTFHNVWWVSWSKIYKSS
                     "
     gene            1949..2395
                     /locus_tag="VLA74_07485"
     CDS             1949..2395
                     /locus_tag="VLA74_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF50585.1"
                     /translation="MSAVSEIMSNKTVLTVRLDSNLSALDISKLMIKKNVGSVIVLDS
                     KVLPIGIITEHDIVRKICAKNLVPDKIQCKEIMTSPVITIMSYDSIDSATKKMNKNKI
                     KRLPVMEENNKVIGILSISDITKHLSKIILDDYKRFRFLHSAIQTN"
     gene            2463..3140
                     /locus_tag="VLA74_07490"
     CDS             2463..3140
                     /locus_tag="VLA74_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSF50586.1"
                     /translation="MSEHSFNDLILVNQRIINCKRCLRLAEYIKNVENKKVKRYRNLD
                     YWSKPVCGFGDLNAGLIIIGLAPAAHGGNRTGRMFTGDSSGDWLMKALYQYNFCNQPF
                     SNYMNDGLVLNNVYVTSIVKCAPPKNKPLPVEISNCNEYLTKELKLLSQNSKIFLTLG
                     KLAFDEFCKIHKIKNIKFKHGLMYHVDNNKILIVSYHPSKQNTNTGKLTWSMWTNIFK
                     QIRDILV"
     gene            3446..3889
                     /locus_tag="VLA74_07495"
     CDS             3446..3889
                     /locus_tag="VLA74_07495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50587.1"
                     /translation="MIRNRLSSSYKYQKIRYISIVSLVSFSFPFLSLDIEAQTSSANN
                     TATTKVDQINLTIENLLVDRGGTNLVEIKGDIKNNSTNDLHEIKVHAEYYDKNGILLE
                     KVDHFITTPAYILKPDKQVSFDITEVIAFNKLADYKIVASGQPTS"
BASE COUNT         1701 a          603 c          721 g         1635 t
ORIGIN      
        1 tttttctttt tacaaacaaa ataatttcta aatatcaatg actttttttc tggtatttag
       61 ataacatcta tgattttttt ataaatcata ataagataaa gattattatt atcttaaata
      121 aaatgaatat tatttaattc ttgagcgaat cttcgtcacc tagcttggca tttcaagaag
      181 gaaaaaatgc agcttggctt tcaatgtgga cgctactggc aataggtata gcagaattac
      241 ttgtctcatt ttatacaact agtttgactc ttcttgcaga tggtctggac tcgatggcgg
      301 atgcactaat ctcatttatc gtatggtttg gaatttacat gatacaaaaa ccaaagaaca
      361 gattatttca atacggatat gcaaaggtag aaagttttgc agcatttgtt gcagcagtcg
      421 tagtaattat cttggggcta ttcattatat acagtgctta tgagagaata gtacatccag
      481 tcgagactac atatccggaa ataacaatga taaccctctt ggcagcagga atcatatcac
      541 tccatagagc atttcgtgta cacaagattg ctaaaaagta taatttaatc tctctaaaat
      601 tggatgcaaa aaattcaatt aaggatggat ctgcttcgtt tgttggattt ggaagcgttc
      661 ttgctggata ttttgggata ccatatatgg attctattgg aagtatcata atagcaggat
      721 acatattttt tatggcttat gtagctctga aagaatctac atttgtatta ttggatgcag
      781 tagccagtcc gcaattaagt gataatatta agaactttgt ggaaaaaaat ttctctgttc
      841 ctgtatcaaa ggttttattg agaccattag gttattcttt tgatattgaa gttcacatca
      901 agttggatcc gaattcgaca ctaaaagata gtcatgaaat tgttaaagtt atacgaacag
      961 ctattatcaa gaaatttaaa aatgctgaag tactggtaat accatatcca atgtagtagt
     1021 gattccattt ctactgaaat taatctaggt tacattgcct actttgtcaa aaagataaat
     1081 ctgtggtatg taaatctcaa atatttgtat tgttttcatc aactttattt cgtttatagt
     1141 tgttaggact gctaaaacag ttgaaatcaa aagtactact ttggattcat caaaagaaag
     1201 tatatgtttc aaatatcaaa ttgaactttt tttattattt cttataatgt tgataataat
     1261 catagtcgtt tggaaaggtt actcaatata atattagtac taaaaatagg atcaaaagat
     1321 tacatatacc ttcaagcact aatccaggtt ttagaaatat tgtctttatt tgaaaagcaa
     1381 attgttaaca tatatttatt tttttggtgc taatcataaa tcaaataact ttatattcta
     1441 agtattgtta actttcagta ttgagctgga tttatttggt gttttagttt tatcctctgt
     1501 tggattcatc attagtttta taggcggaat ggtgggtctt gttcttggta gtataagact
     1561 tcctgtaatg ataaaaattc ttaaaactga accaaagata gcagttggca ctaatatggt
     1621 tacatcagca attatgggta catttggatt tattggtcat gtggttagca atgaagtgaa
     1681 tttatttaat tattttagga ccttccacaa tgtttggtgg gtttcttgga gcaagatata
     1741 caaatcgtct tagtccagca actcttaaaa aattaatagg aatagttcta gccatagttg
     1801 caggtactat atttctatct cagattttag aactaaatat atttattttt taattaacat
     1861 aatctttttt tcgaggttgt attactgacg tatgtttatg cgattaacat tagttaacta
     1921 aaaaaatgac ttcatttaca atgaaattat gagtgcagta agcgaaataa tgtcaaataa
     1981 gactgttctt accgtaagac tggattcgaa tttaagtgca ttagatattt ctaaattgat
     2041 gataaaaaag aatgttggat ctgtaatagt attggattcg aaggttctac cgattggaat
     2101 tataaccgag catgatatcg taagaaagat ttgtgctaaa aatcttgttc cagataaaat
     2161 acaatgtaaa gaaataatga cttctcctgt tattacaata atgtcctatg attcaataga
     2221 ttctgccaca aagaaaatga ataaaaataa aataaaaagg cttcccgtaa tggaagaaaa
     2281 taataaggta atcggaatat taagcataag tgatataact aaacatctat caaaaattat
     2341 attagatgat tataagaggt ttagattctt acattcagca atacaaacta actagttctt
     2401 gtatattttc ggacaactgc gtttgccata agattaaatt ttattaatgt agtgtatttc
     2461 tattgtctga gcactctttt aatgatttaa ttcttgtaaa tcaaagaatt ataaattgta
     2521 aaagatgttt gagattggca gaatacatca aaaatgttga aaacaaaaaa gttaaacgat
     2581 atagaaatct ggattattgg tccaaaccag tatgtggttt cggcgatcta aatgctggtt
     2641 taatcataat cggtctagct cctgctgcgc atggaggaaa tagaacagga agaatgttta
     2701 ctggagatag ttctggtgac tggcttatga aggctttata ccaatataat ttttgtaatc
     2761 aaccttttag caattatatg aatgatggat tggtattaaa caatgtttat gtgacctcta
     2821 tagtaaaatg tgctccgccc aaaaacaaac cgttgccagt agaaattagt aactgtaatg
     2881 aatatttaac taaagaatta aaactgttaa gtcaaaatag taaaatattt ctaactttag
     2941 ggaaattagc ttttgatgaa ttttgtaaga ttcataaaat taaaaatata aaatttaagc
     3001 atggattaat gtaccatgta gataataata agatattaat agtatcatat cacccaagca
     3061 aacaaaatac caacacggga aaattaactt ggtctatgtg gaccaatatt tttaaacaaa
     3121 taagagatat tttagtttga aatagaaaga acatattgat atagattatc atctgcttgt
     3181 taaatcattt ctatataagc acatatttgt tgtgaatttt gctattatag aaatcgtact
     3241 cagatttacc aaaaatatac aaatgagaat taggtggcaa ataaaagatt acattagaga
     3301 ctgaactcat tacaaattat attaaattat ctatgattat tttcattaaa attctttacg
     3361 acttgcgcag tacaaaacaa agaataataa acaatcattt aattttcaat taatttaaat
     3421 accctgcctc cataaattaa ttaccatgat aaggaataga ctgtcaagtt catataaata
     3481 tcaaaaaatt cgatatattt ctatagtatc gttggtttca tttagttttc cttttcttag
     3541 tttggacata gaagcccaaa cctcctcagc aaataatact gccactacga aagtcgatca
     3601 gataaatttg acaattgaaa atcttcttgt agatagagga ggaactaatt tagttgaaat
     3661 aaagggtgat ataaagaata atagtacaaa tgatttacat gaaataaaag ttcatgcaga
     3721 atattatgat aaaaatggaa ttttattaga aaaagtcgat cattttatta ctactcctgc
     3781 ttacatttta aaacctgata aacaagtgtc tttcgatatt acagaggtta ttgcttttaa
     3841 taaattagct gattacaaga tagtggcaag tggacagcct accagttaaa acatactttt
     3901 caaatatttc ctaattttta ttatagtata aatcttctga ctttgttagg taaggagatt
     3961 aataaaccga aattaataaa ttcttgttaa tggagaaggg aatatttcaa aaatatctta
     4021 catctgttat tttattcttg agatagctga gactgttttc tgtctctgtt aatttaatga
     4081 tatccattta gctatcagtt tcgaatctaa taaatgatcg atttcatgat aaataggatg
     4141 ctttgattgt ttttacattt ctatttttgt ttccaataat tatgcacaat agatcaaaca
     4201 aaatacaatg ggctcataaa catatatgga ccgaaattct tattgaaacg gtccacaaag
     4261 gaatctatgg taccagcatt gccaagaaag taatgtgttt gtacaagaaa aggttattca
     4321 aatcattcac acaaagtata taataaatgt attatacata gatacacata tgatccctaa
     4381 gatcaaattt attttatata aaatatccat taagtaagtt tatcaatcaa ctgtgattac
     4441 aggggtaatt acttttttca aaggtagaac tagatctttt tgataaataa tattattata
     4501 caaaaaagaa caggattgaa atataatcta ttatatgtat ataattaaga caatgctctt
     4561 catatataaa attcaaagct gataaataaa atccgattca aggcaaggta taaattagaa
     4621 aattaaaaac gcctttaaaa tattcatcta atcaaatgtt
//
LOCUS       DATIAS010000368         2873 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1701114, whole genome shotgun sequence.
ACCESSION   DATIAS010000368 DATIAS010000000
VERSION     DATIAS010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701114"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2198
                     /locus_tag="VLA74_07500"
     CDS             <1..2198
                     /locus_tag="VLA74_07500"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSF50588.1"
                     /translation="MPEAGGGYLWVREGLRRPNAFISGWMAWLAHIIAGSLYAVGFGS
                     FFVSLLQMTNILPIESLFGIIPLDKLTAVAVVAVFTFINIKGTSETGRVGTIITVVQL
                     VAITSIIIAGFWVISSNPSNNSWQSNFADFLPMGFAGLVAAMGLTFIAFEGYEIIVQT
                     GEEIKNPKRNIPRAIFISLALVVIMYCLIAFVSIGAIFPDIPSWQFIGQNGELGIMKA
                     VELFLPYGAFIVLAGGLVSTLAALNATTFSSARVAFAMGRHYNLPHRLSAIHPKFKTP
                     YVSVILSCIIMGAMAYSLPLEDIAHASGVIFLLLFTQVNLAVISIRRMYGDKLDYGYK
                     TPFFPYVSIIGIILTIGLAVYLLITAPLSWAITALWVLIGFTIYRIFTFKKEVEYYSP
                     LITSEGNLVRKDFRILLPYTPENPDRLIRYAIKVAQEKGGEINILRTITVPHQTPLSA
                     GIAFIDSARKTFDSLEEILNREDVVWHYFVRISHDATEAVLTTIAEQKINLMITDYET
                     MRSNKKLQTLLTCDVLAIIPHSEDFIVLERENNANETRLTTKENKKNMVILYDNGDNS
                     DEILRVTSWFINIEKINLNVVAINRKGLNNYNNKTNSKSKKSRSDKDASTFAKRRKFF
                     QEAGVELNEIYVTEDVEKNSTQFAKLIVESIMRYNPDIVITESYIGKYNLFSSTKFAH
                     LLLSQLNYPIIIVRDYAIPFVNIVTHSVNRITGNLGPVYLVRLMKNKIK"
BASE COUNT         1013 a          387 c          447 g         1026 t
ORIGIN      
        1 caatgccaga agctggtgga ggatatttat gggtaagaga gggactacgt cgtcctaacg
       61 cttttattag tggctggatg gcatggctag cacatattat tgctggtagt ttatacgcag
      121 ttggctttgg ttcctttttt gtaagtttat tgcagatgac aaatattctt cctatagaaa
      181 gtctttttgg tattattcct ctagataaat taactgctgt tgcagttgta gcagtattta
      241 cttttataaa catcaaagga acctcagaga caggaagagt aggcactata ataacagtag
      301 tacagctagt agcaattact tcaattataa ttgcgggatt ttgggtcata tcctctaatc
      361 cttctaataa tagctggcaa tctaattttg cagattttct acctatgggt tttgctggac
      421 tagtagctgc aatgggttta acatttattg cattcgaagg atatgaaata atagttcaga
      481 caggagaaga aattaaaaat cctaaaagaa atattccaag agcaattttc atatctcttg
      541 ctcttgttgt aatcatgtat tgtcttattg cttttgtttc tattggtgct atttttcctg
      601 atataccttc atggcagttc attggtcaaa atggtgaatt aggaataatg aaagcagtag
      661 aattattttt accatatgga gccttcatag ttttagcagg aggattagta tctactcttg
      721 ctgcactaaa tgcaactact ttctcttcag caagagttgc ttttgcaatg ggacgacatt
      781 ataatttacc tcatcgatta agtgctattc atcctaaatt taaaacacct tatgtttctg
      841 ttatattatc atgtattatt atgggagcaa tggcttattc tcttcctctt gaagatattg
      901 cacatgcttc aggagtcata tttttacttt tatttactca ggtaaatctt gcagtaataa
      961 gtatacgaag aatgtatggc gataaacttg attatggata taaaacaccg ttcttcccat
     1021 atgtttctat aataggtata atattaacaa taggattggc tgtttatctt ttaattacag
     1081 ctccacttag ctgggctatt actgcattat gggttttaat aggtttcact atctatcgta
     1141 tctttacatt taaaaaagag gtagaatact attcgccttt aataacaagt gaagggaatc
     1201 ttgtaagaaa agattttaga attctactac cttatactcc agaaaatcct gacagactaa
     1261 tacgatatgc aataaaagtt gctcaagaaa aaggtggtga aatcaatatc ttaagaacaa
     1321 taacagttcc ccatcagaca ccgctctcag caggaattgc atttatagat tcagcaagaa
     1381 agacatttga ttcccttgag gagatattaa atagagagga tgtagtctgg cattattttg
     1441 taagaatttc tcatgatgcc actgaagcag ttctaacaac gattgcagaa caaaaaatta
     1501 atttaatgat tacagattat gaaactatga gaagtaacaa aaaattacaa acattgctaa
     1561 cctgtgatgt tttggcaatt attccccata gtgaagactt tatagttttg gagagagaaa
     1621 ataatgccaa tgaaacaaga cttacaacaa aagagaataa aaaaaatatg gtaattttat
     1681 acgataatgg agataattct gatgaaatat taagggttac aagttggttc ataaatattg
     1741 aaaaaatcaa tttgaatgta gttgcgataa atagaaaagg tttgaataat tataataata
     1801 aaaccaattc taaatcaaaa aaatctagaa gcgataaaga tgcttctact tttgcgaaac
     1861 gacgaaaatt tttccaagaa gcaggagttg aactgaatga aatttatgta acggaagatg
     1921 ttgaaaaaaa tagtacacaa tttgcaaaat tgatagtaga atcaattatg agatataatc
     1981 cagatatagt aataactgag tcatatatag gaaaatataa tctgtttagc agcacaaaat
     2041 ttgctcattt attgctgtct caattgaatt atccaataat aatcgtaagg gactatgcta
     2101 ttccatttgt taatattgta acacatagtg tgaatagaat tactggtaat ttaggcccag
     2161 tatatcttgt aagattgatg aaaaataaga taaaataata aaagtgtaat atttactcct
     2221 caaataatta atttgtaaat ctttcaatat ttgttgtttt aaatatcctt aattaaagat
     2281 atagtaattt tatttataat tttatttctt tattcatgat aaaccttaac atttcaatga
     2341 ttatttgtac tctttttaat atacttgaat aaatctgtat ggttatcaat attataatat
     2401 ttttttaaat tttctactat atgattttca aaaatgctat ttttgttttt ttgttcattt
     2461 ccatttcttt tcattctttt ctctttaatg attatattta tattttaaag aattatattt
     2521 agaaaatatt tcagataatt tttttcttat gagtatgtat tttaccttta aaatagtagt
     2581 tggtcgataa gctagattaa catcattcaa caaaaatcta agtttctaat aataaaagct
     2641 aattacaaga tagcagtatt atgcaataat caagttttaa tttaactatt tttaatttgt
     2701 tatacacagc taaaaatgca aattttgaaa taaagaacaa tggaaaacat tagttggtac
     2761 gtccatccta atgatgaaaa tataatagac aattttaaat taaattagac ttaattttgt
     2821 ataatctaca tattctaact ttcaccaaca atctggagat gccagaaacc cat
//
LOCUS       DATIAS010000369         3598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1020867, whole genome shotgun sequence.
ACCESSION   DATIAS010000369 DATIAS010000000
VERSION     DATIAS010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3598
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1020867"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1079
                     /locus_tag="VLA74_07505"
     CDS             159..1079
                     /locus_tag="VLA74_07505"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HSF50589.1"
                     /translation="MRYSNKLFLFLLFSSILITIISLSFPIINAQPDNNNNELTIIFP
                     DVGQGDSILIIFPNQKTMLIDGGERDQSDTILSLLTEYNIEKIDSVVATHPHADHIGG
                     LLGIVQNIPIGKIYDSGQEHNTQTFENYLDLIESKRIPFSLARENNEIDDLDSKVDIK
                     ILNPPEPLFTGTRNDINDNSIVLKLTYGNFSILLTGDIGEIPEERLVNNTNIKDIDIL
                     KVPHHGSKYSSTKEFLYSVNPQIAVILVGENNRYGHPHLETLERLNNHESIQHIFRTD
                     IDGTIILITDGNQFAMKSLDTNEIIYHILN"
     gene            1149..1457
                     /locus_tag="VLA74_07510"
     CDS             1149..1457
                     /locus_tag="VLA74_07510"
                     /inference="COORDINATES: protein motif:HMM:NF022659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3006 family protein"
                     /protein_id="HSF50590.1"
                     /translation="MIEKTVKGSLDRFEGGSNNNDSKYAIIYSDKDPDKKYDVPIELL
                     DKNNIIKKEGIRVIIHLDENDKIVNLEYDKEGTKKSKKRIRTKLKRLLSGKHLDVNKT
                     "
     gene            1733..1906
                     /locus_tag="VLA74_07515"
     CDS             1733..1906
                     /locus_tag="VLA74_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50591.1"
                     /translation="MIIKQKLAITMIILFSLAMIMTPTVYAAIEKVETYAEDICINTI
                     KVIGMAKIAIFKK"
     gene            1849..2037
                     /locus_tag="VLA74_07520"
     CDS             1849..2037
                     /locus_tag="VLA74_07520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50592.1"
                     /translation="MYKYYKGDWDGKDCDIQEVKDEQKYYDDIASLEDSICEDEEVKD
                     VSKEDWIDLCKNLNVFEK"
     gene            2376..2843
                     /locus_tag="VLA74_07525"
     CDS             2376..2843
                     /locus_tag="VLA74_07525"
                     /inference="COORDINATES: protein motif:HMM:NF019348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50593.1"
                     /translation="MLQYLYSHPELRFLCLDEIEKLKKNEIAVLLSIMENQRLVITKK
                     TMMCNRKQNLRIFATCNNKNKLSPEILSRFLKFHLKEYSQDEFNMIATNIVTARFNKT
                     KEFAQKLAQAVWYNIGSKDIRDVIKVARLAKNENDVDMIIEAIEEYTDKEAWN"
     gene            3183..3404
                     /locus_tag="VLA74_07530"
     CDS             3183..3404
                     /locus_tag="VLA74_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50594.1"
                     /translation="MFTLTTSLPDEGWCTSLLRKVRWKDYILCPHCKSNNVKKDGHYR
                     SYQKYFCKQCERWFNDKTGTIFHYSHIHL"
BASE COUNT         1435 a          470 c          536 g         1157 t
ORIGIN      
        1 atgaactcaa agagaaaata ttacaatata atggaataat atctgagaat gaatctaaaa
       61 agaaaccgtc tatattgaat tgcccaagat gtgaaatagt taatgcagtt tgttatatat
      121 aataaagtat aaaaattata taacttatta ttttataaat gagatatagt aataaattat
      181 tcttattctt acttttttca tctattctta ttacaataat atcgcttagt tttcccatta
      241 tcaatgcaca acctgataat aataataatg aattgactat tatatttcca gatgtaggtc
      301 aaggggattc tattcttatt atctttccaa atcaaaagac aatgctaatt gatggtggag
      361 aacgtgatca atctgatact atcctttcct tattaacaga atataatatt gaaaagatag
      421 atagtgttgt tgctacacat ccacatgcag atcatatagg tggcttgtta ggtatagtac
      481 aaaatatacc aataggtaaa atatatgatt ctggacaaga acacaataca caaacttttg
      541 aaaattatct tgatttgata gaatctaaaa gaattccctt tagtcttgca agagaaaata
      601 atgaaataga tgatttagat tctaaagtcg atattaaaat tttaaatcct ccagaacccc
      661 tatttacagg aactagaaat gatattaatg ataattctat agtattaaaa ttaacatatg
      721 gtaatttttc tatcctcctg acaggcgata taggagaaat acctgaagaa agacttgtaa
      781 ataacacaaa tataaaagat atagatattt taaaagttcc acatcatgga agtaaatatt
      841 ctagtacaaa agaattttta tactcggtaa atcctcaaat agcagtgata ttagtgggtg
      901 agaacaatag atatggacat ccacacttgg aaacattaga aagactaaat aatcacgaaa
      961 gtatacaaca tatttttaga accgatatag atggtactat aattttaata acagatggaa
     1021 atcaatttgc tatgaaatca ttagatacta atgaaataat ttaccatatc cttaattaat
     1081 tattgattta gtgaacaaat acaataatta attaattagt ttaatagcta ttatattatt
     1141 atcattaaat gatagaaaaa acagtaaaag gaagtctaga tagatttgaa ggtggtagta
     1201 ataataacga tagcaaatat gcaataatat attctgataa agacccagat aagaaatatg
     1261 atgtaccaat tgagttattg gataaaaata atataataaa aaaagaagga atcagagtta
     1321 taatacattt agatgaaaat gataaaatag taaatctaga gtatgacaaa gagggtacaa
     1381 aaaaaagtaa aaagaggata aggacaaaac taaaaagatt gctttctggc aaacatctag
     1441 atgttaataa aacataaaaa aagattttgt ttgttaacat tttgtaatta ttctctatgc
     1501 caatatagaa ttacaaaatt gtgtcaaaat cagttcacac acctccgaac ccgtcaacca
     1561 attgggctca tatactagta agttttacca tctgatcctc atggctttga tcgggaagga
     1621 agacggcata ggttgtgaaa cataataaat aaaacaatta attttctaat aatattcaat
     1681 attatgatta tattttaaaa agggataaaa gtaactatat tgataacata atatgattat
     1741 taaacaaaaa ctagccatta ctatgataat attattttct cttgcaatga ttatgacacc
     1801 aacagtatat gcagcaatag aaaaagtaga aacgtatgct gaagatatat gtataaatac
     1861 tataaaggtg attgggatgg caaagattgc gatattcaag aagtaaaaga tgaacaaaaa
     1921 tattatgatg atatcgcaag tttagaagat tctatatgtg aagatgaaga ggtcaaagat
     1981 gtaagcaagg aagattggat agacttatgt aaaaatctta atgtatttga aaagtaactc
     2041 tactcttttc tactagacta gaatgtaaat tgtattaaat aaatgacatg tttttattaa
     2101 attttgattt taaacagcga accgagattt taaataacat acttcattat tgaataatta
     2161 ttcatataat tttaaaaatt aacaaaagtt aaactcatag aaattcaaaa actttatcta
     2221 ttatgttacc gaaccctgtt ataatgagaa tcgaagccct caacatagat tcttaatatt
     2281 ctatttatta taatgctata caaaggattt tatagaaatt aaaaataaga tgtatatttt
     2341 attgaatttc aaacaataat agtactggag caggtatttt acaatacctt tattcacatc
     2401 cagaattacg ttttctatgt cttgatgaga ttgaaaaatt aaagaagaat gaaatagctg
     2461 tacttctttc tataatggaa aatcaacgat tagtaataac aaaaaagact atgatgtgta
     2521 atagaaaaca gaatctgcga atctttgcca cttgtaataa taaaaataaa ctttctccag
     2581 agatactttc aagattcttg aaatttcatt taaaagaata ttcacaagat gaatttaata
     2641 tgatagctac aaatattgtt acagcgagat tcaataaaac aaaagagttt gcacaaaaat
     2701 tagctcaagc agtatggtac aatattggtt caaaggatat acgagatgta attaaagtag
     2761 caaggctagc taaaaatgaa aatgatgtag atatgattat agaagctatt gaagaatata
     2821 cagataaaga agcttggaat taagcattct ctctttagat gaaactactc aattttatta
     2881 taacaatatg ctatttctaa tattagttct tttctagact ccacgaattg gacgccggga
     2941 gtgggactcg atttctaaac ctgtcaaaat ttatctaaat aatcccatga acggcagtaa
     3001 tgggttcgaa tcccatcccc tccattccat tcacgggttt atacagaagc cttttatttc
     3061 ataatcaaat attttgattt aaataagact aaaaaatgcc aagtaaaaat tctcttagtt
     3121 ataccgctct tattaacaaa tgtttcagcc aagcttaaag ctgcataaaa cataattagg
     3181 atgtgtttac tttaaccaca tctcttcctg atgaaggctg gtgtaccagt ttactgagaa
     3241 aggttcgatg gaaagattac atattatgtc cacattgtaa gtcaaataac gtaaagaagg
     3301 atggtcacta tcgatcctac caaaagtact tttgcaaaca atgtgaaaga tggttcaatg
     3361 acaaaactgg tacgatattt cattattcac acatacacct ttgaaggtat ggtttttggc
     3421 aatgtatcta tactttgtac tcaggcccgg atgttcaata agagaggtat cacttgaggt
     3481 agttgtacca tttccaagat gctatcgatt tatcagaaca gttatggaaa agttatcttc
     3541 atcatcatca tcttctgcta aacttggtgg tcttactgaa ggtgatgaat tctatatc
//
LOCUS       DATIAS010000370         5121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1564745, whole genome shotgun sequence.
ACCESSION   DATIAS010000370 DATIAS010000000
VERSION     DATIAS010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5121
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1564745"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            341..1081
                     /locus_tag="VLA74_07535"
     CDS             341..1081
                     /locus_tag="VLA74_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047294 - phosphoglycerol
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0006650 - glycerophospholipid metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranylglyceryl/heptaprenylglyceryl
                     phosphate synthase"
                     /protein_id="HSF50595.1"
                     /translation="MNKIEKYILSEKKKKGTLCFPLIDSENNTLDMLTVAKKAEQLGA
                     SAILVGGSSISNQIELSEVISKLKSSIKIPVILFPGNITGISPNADAILFMSLLNSEN
                     PYFITGAQALGAIGVKKSGLEALPTGYLIIGEGTTAWFIGQAKGIPFNKLNLAVMYSL
                     AAQYLGMRFLYLEAGSGASQNVSPEMVSAVKKYYEGILIVGGGIRSPEIAKKIADAGA
                     DIIVVGTMIEDDDNWEKKLFKIVQAITK"
     gene            1078..4632
                     /locus_tag="VLA74_07540"
     CDS             1078..4632
                     /locus_tag="VLA74_07540"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II large subunit"
                     /protein_id="HSF50596.1"
                     /translation="MNNTFSFLDENSIHELKKLKRPSFYESYHTSILESVYDIYNIAG
                     QARNQGIDVTTTIESQIVYDLADRVAKMHDIDITERLRILLSQTTKEKAALKISEEIA
                     LGEYSTDDLRTRLDSAVRVSLAIVTEAVTVAPIQGISDVQIKKNADGSQYLSVSFAGP
                     IRSAGGTEAALTMLIADHVRKVVGLEKYQANSFDDETGRFVEELRIYEREVGNFQFKT
                     LDEDVIKCIGNLPVELDGVDTDPVEIIGHRNMKRINTDRVRGGALRVMNDGLIGRSRK
                     LLKLIDSLGLEGWDWLKDLKGAIQKEGVTEDDTVHHRMSEVITGRPVLSMSKKIGGFR
                     LRYGRCYNTGFSTIGIHPVIPVLLNYAVVVGTQIKIDTPGKASTIALVDSLEPPLVKL
                     DDGTVTYVSTIEQAMQLQKRVEKILYLGDILISYGDFLENNAKLLPASYVEELWALEL
                     KSQLNKIFENEDNPFNNKLPTRQRLIDLAYNPFKEIPTIKEAFQLSKSLKLALHPKYS
                     FYWESISIDELLLLQKELVKRFNTDDTSQAIQHFESLELDYQDKLKAILERLGVVHLL
                     KNDGQLIVLNDINQVNSLYILLYQNKNNIDIQQLPTKISIHDYIFEISGITVKQKFAS
                     SIAVRVGRPEKAAERKMKPPVHVLFPVGNKGGATRDLIKASKEEILYTEIANRYCDKC
                     KRPSLGARCRICFSDTIIKTLCKICREPISHLTSKDQKNSNNKCSKCGREGKTYSPMK
                     YPLRNILEEAQTKLQIQAKQPLKGVKFLMGKNRSAEPIEKGILRQTFNLYAFKDGTIR
                     YDATNEPLTHIIPKYILSNPEKLKELGYIRDYLGKDLNSEDQLIEIFSQDVVIPLDTA
                     KHLLDVSKYIDNELVKLYGLSPFYNASSIDDLIGHIIVGLAPHTSVGIIGRIIGYTNS
                     QVCLASPMWHSAKRRDCDGDADSIMLLMDVCLNFSKEFLPDKIGGLMDAPLLIQPIVL
                     PHEVQRQALNIDVVSNYPLQLYEKSFKHSKAESLVNEIEIIKNRIDSELQFYNYSFTH
                     YTNVLTTEIQHSAYSTLTTMNEKLEMQISTAKIINAVDPDEVASMVLTTHIIPDIMGN
                     MRSYSSQSFRCTSCGEKYRRIPLMGKCLGCGNNLIQTVTRNSVEKYVHIALDINKRFK
                     MSDYLSSRIESLVMELGYVFKEKEIAKNSQSSLFDFID"
     gene            complement(4847..>5121)
                     /locus_tag="VLA74_07545"
     CDS             complement(4847..>5121)
                     /locus_tag="VLA74_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HSF50597.1"
                     /translation="QLLPGDIKAGRHYMHPSGVRIGANEITRLGMKENEMIEIATFIK
                     RVVIDKEDAISVKKDVTEFKKQYQQLHYVFDGQLDAYKYISLVRQN"
BASE COUNT         1916 a          762 c          830 g         1613 t
ORIGIN      
        1 gaactgattc ttttatggat tttaccgccg ctcgatttat tataaattat tgaaatttgt
       61 ctattcgtaa ataaggattt ctcaattatt ttatcaaaaa gataaaaatt cttctttcta
      121 tcatcgctat tagtactata catatctgta tagtaaaaga cactagttat ccataatagt
      181 atttcctata aaaatatcaa aatttcaatt ttatgaattc ttttatttat tctatacttt
      241 gaatttactt atgttaatac tattttatca tattctagta ctttcaaacc gaaaacatat
      301 tttacgtcag ctaatatctt tatacgatcc tattataatc ttgaataaaa ttgaaaaata
      361 tattttaagt gaaaagaaaa aaaagggaac cctttgtttt cctttgatcg attcagaaaa
      421 taatacactt gatatgctaa ctgttgccaa aaaagctgaa caactaggcg cttcagctat
      481 tctagttggt ggctcatcaa ttagtaatca aatcgaatta tccgaagtga tatcaaaatt
      541 aaaatcgtca attaaaattc ctgtaatatt atttcctggt aacatcacag gaatatcacc
      601 aaatgccgat gcaatattgt tcatgtcact tttgaattca gaaaaccctt attttataac
      661 tggggcacaa gcattaggtg caattggggt caaaaaatct ggattggaag ctttaccaac
      721 aggttattta atcatcggag aaggaaccac tgcatggttc atcggacaag ctaaaggaat
      781 tccattcaat aaattaaatc tagctgtcat gtactcactt gctgctcaat atcttggtat
      841 gagattccta tatcttgaag caggttcagg tgcaagtcag aatgtctcac ctgaaatggt
      901 atcagcagtt aaaaaatact atgaaggaat cctaatagta ggaggtggta tccggagtcc
      961 agaaattgca aaaaagatcg cagatgctgg tgctgatatt atcgtagttg gaacaatgat
     1021 tgaagatgac gataactggg agaaaaaatt attcaaaatt gttcaagcaa tcacaaaatg
     1081 aataatacct tttcattttt agatgaaaac tcgatccatg aattaaaaaa gttaaaaaga
     1141 ccatcatttt atgaaagtta tcatacatct attctagaat cagtatatga tatttataat
     1201 atagcaggtc aggctcgtaa tcaaggaata gatgtaacaa caactataga atcacaaata
     1261 gtttatgatt tagcagacag ggttgcaaag atgcacgata ttgatatcac agaacgatta
     1321 cgtatcttat tatcacaaac aacaaaggaa aaagctgcat taaagatttc agaagaaatt
     1381 gcactaggag aatatagtac tgacgatctc agaactagat tggatagtgc tgtacgcgta
     1441 agtcttgcaa ttgttactga agcagtaaca gttgcaccaa tacaaggaat ttccgatgtt
     1501 caaattaaaa agaatgctga tggtagtcaa tatctttctg tatcatttgc aggacctatt
     1561 agatcagcag gtggtacaga ggcagcattg acgatgctaa ttgccgatca tgttagaaaa
     1621 gtagtaggtc tagaaaaata tcaagcgaat tcctttgatg atgaaacagg aagatttgta
     1681 gaagaattac gtatatatga acgtgaagtt ggtaattttc aatttaaaac attagatgaa
     1741 gatgtgatta aatgtatagg caatttacca gttgaattag atggtgtaga taccgatcca
     1801 gtagaaataa ttggacatag aaatatgaaa agaataaaca cagatcgagt acgaggagga
     1861 gcgctcagag taatgaatga tggtctgata ggaagaagta gaaaattatt aaaattgata
     1921 gatagtttag gattggaagg atgggattgg ctaaaagatc taaaaggagc tatacaaaaa
     1981 gagggcgtta ctgaagatga tacagtccac cacagaatgt ctgaagtaat aaccggaaga
     2041 cctgtgttgt caatgtcaaa aaagattggc ggctttagat taagatatgg tcgttgttat
     2101 aatactggtt tttcaaccat tggaattcat cctgttattc cagttttatt aaattatgca
     2161 gtagttgttg gaactcagat taaaattgat acgcctggaa aggcatctac aatagccctc
     2221 gtagattcat tggagcctcc attagttaaa ctagatgatg gaactgttac atatgtttct
     2281 acaatagaac aagcaatgca actccaaaaa agagtagaaa aaattttgta tttaggcgat
     2341 attctaatta gttatggtga ctttttagaa aacaacgcaa aattactgcc agcttcttat
     2401 gtagaagaat tatgggcgtt agaattaaaa tcccaattga ataaaatctt tgaaaatgaa
     2461 gataatcctt tcaataataa gttacctaca agacagagat taatagatct agcatataat
     2521 ccatttaaag aaattcctac aataaaagag gcatttcaac ttagtaaatc cttgaaactt
     2581 gcccttcatc caaaatattc attttattgg gagtcaatat caatagatga gcttctactc
     2641 ctacaaaaag aacttgttaa acgattcaac actgatgata ccagccaagc aattcaacac
     2701 tttgaatcac ttgaacttga ttatcaagac aaattaaagg ctatacttga acgtttaggt
     2761 gtagttcatt tattgaaaaa tgatggacaa ttgattgttc tgaatgatat aaatcaagta
     2821 aattctctgt atatactact ttaccaaaat aaaaacaata tagatataca acaattacca
     2881 actaaaatat caatacatga ttatatattt gaaatatctg ggataactgt taaacaaaaa
     2941 tttgcttcat caattgccgt acgagtagga cgtccagaaa aagcagcaga gagaaaaatg
     3001 aaacctccag ttcatgtttt atttccagtt ggaaataaag gaggagccac tagagatctt
     3061 attaaagcat caaaagaaga aattctctat acagaaattg caaatcgtta ttgtgataaa
     3121 tgtaaaagac cttcacttgg tgctagatgt agaatatgtt tttctgacac aataataaaa
     3181 actctttgta aaatctgtag agagcctata tctcatttaa cttccaaaga ccagaaaaat
     3241 tccaacaata aatgtagtaa atgtggcaga gaagggaaaa catattctcc aatgaaatac
     3301 cctcttagaa acattttaga agaagcacaa acaaaattgc aaattcaagc taaacaacca
     3361 ttgaaaggag taaaattttt aatgggtaaa aatagatctg ctgagccaat tgaaaaaggg
     3421 attttaagac aaacattcaa tctttatgcc ttcaaagatg gcacaatacg ttatgatgca
     3481 accaacgaac cattaactca tattattcct aaatatatat tgagtaatcc agaaaagtta
     3541 aaagaattag gatatataag agattatctt ggcaaagatc taaattctga agatcagttg
     3601 attgaaatat ttagtcaaga tgttgttata ccattagata ctgcaaaaca tttacttgat
     3661 gtatctaaat atatagataa tgagcttgta aaactatacg gactatctcc attttacaat
     3721 gcatcctcta tagatgattt gataggacat atcatagtag ggctggcacc tcatacttct
     3781 gtagggatta ttggtagaat tataggatac acaaattcgc aagtatgttt agcatcacct
     3841 atgtggcatt ctgcaaaacg cagagattgt gatggagatg ctgattctat catgttatta
     3901 atggatgtat gtttgaactt ctcaaaagaa ttccttccgg ataagatagg gggattaatg
     3961 gatgctccat tattaattca accaatagtt ttaccccatg aagtacaaag acaagcacta
     4021 aatattgatg ttgtatcaaa ttatccacta caattatacg aaaaatcatt taaacatagt
     4081 aaggcagaaa gtctagtcaa tgaaatagaa attattaaaa acagaattga ttctgaatta
     4141 caattctata attattcatt tactcactat accaatgtat taacgactga gatacagcac
     4201 agcgcatatt ctacgttaac tacaatgaac gaaaaattgg aaatgcaaat ttctactgcc
     4261 aagataatca atgctgtaga tccagacgaa gttgcatcca tggttttaac tactcatata
     4321 ataccagata ttatggggaa tatgcgttca tattcatcac aatcatttag atgtactagt
     4381 tgcggagaaa agtatagaag aattccttta atgggtaaat gtctaggatg cggaaacaat
     4441 ctaatacaaa ctgtaacaag aaattctgtt gaaaaatatg ttcatatcgc attggatata
     4501 aataaaaggt ttaaaatgag tgattatctt tcaagcagaa tagaatcact tgtcatggag
     4561 ctaggctatg ttttcaaaga gaaagaaata gccaaaaatt cacaatcttc actttttgac
     4621 tttattgact aatctaatat tttaatgaaa atgttgtact caaaataagc tatttccaca
     4681 atgagtaaat aataatttaa gttaaatatt aaggaaatat ttaattatac aaacttaaaa
     4741 aatgtaataa ttgtttacag aatacacaat cttttcattt tataattaat ttatgaaagt
     4801 ttattagttt catctagaat gaaaaaagaa atatttttta atcttatcag ttttgtctta
     4861 ccaaactaat atatttatat gcatctagtt gtccatcaaa aacataatgc aattgttgat
     4921 attgtttctt aaattcagta acatccttct ttacgctaat agcatcttct ttatcgatta
     4981 ctactctttt tataaaagta gcaatttcta tcatttcatt ttccttcatt cctaatcttg
     5041 tgatctcatt agctccaatt ctaacgccgc ttgggtgcat ataatgtctt cctgccttaa
     5101 tatctccagg aagtaattgt c
//
LOCUS       DATIAS010000371         2204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1292635, whole genome shotgun sequence.
ACCESSION   DATIAS010000371 DATIAS010000000
VERSION     DATIAS010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292635"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            204..1577
                     /locus_tag="VLA74_07550"
     CDS             204..1577
                     /locus_tag="VLA74_07550"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HSF50598.1"
                     /translation="MSTAVITTKLQINSKSESIAKFIKSVSIRNKSTAKQYYSRLLFF
                     ERFVQQEQYNNKKISIDNLVKKLKNGELDPYDVLNDYCLFLKNNYNNIGSVTFRDKIT
                     TVKTFLEYNDIEISPRKFKLKVRFPKTVLRHKEAIDKEDIIKILNGCSDLRLKTYVML
                     LASTGLRATEALSIRLKDFDTNNNDNPTKLIIRGEFTKTKVDRYVFLTKEVQNQIKIW
                     LDYKYRTRRICYKDKRTGKTVTEYRTPEKNPDELVFSLYHVNKPSPEVLYDNLTGIFA
                     KTLDRIGMGSREDENENRRRKITLHSMRRFVKTTISDLGYSDYSEWFIGHSGSTYWRK
                     KDSEKAEIFKKIEPYLTFLNVPQLERQGADLQTKIEELQDINQLLRYKQNEKEEQIKK
                     LEESVAFLADKFNAFLASQPGNTILYDNDEQTDVIKGIELKPELNNKAVGTVISTSTN
                     NRSNKIK"
     gene            1712..1834
                     /locus_tag="VLA74_07555"
     CDS             1712..1834
                     /locus_tag="VLA74_07555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50599.1"
                     /translation="MREILPSESKQQSKIRDQSSKFAALAPQNSALEEFRQEKL"
BASE COUNT          881 a          280 c          350 g          693 t
ORIGIN      
        1 tgtatattct tcatatgctc ctattgcagg atttgtaatt catttaatta ctgcaatttc
       61 tataggagtt gccacaggta tatttttata caaaacaaat atcttgaata taagtaaacc
      121 tataaatggt tttatttata catcataaaa catagtaaat acaataactt tatattctac
      181 ttttagggaa agttatttta tcattgtcta ctgctgttat tactacaaaa ttacaaatta
      241 attcaaaatc agaatcaata gccaaattta ttaaaagcgt aagtattcga aataagagta
      301 ctgcaaaaca atattattct cgtcttttat tttttgaaag atttgtacaa caagaacaat
      361 ataataataa aaaaataagt attgataact tggttaaaaa attaaaaaat ggagaacttg
      421 atccttatga tgttttaaat gattattgtc tatttttaaa aaataactac aataatatag
      481 gatcagtaac atttagagat aaaattacaa cagtgaaaac ttttcttgaa tataatgata
      541 tagagattag tccaaggaaa ttcaaattaa aagtaagatt cccaaaaact gtattaagac
      601 ataaagaagc aatcgataag gaagacatta ttaaaatttt aaatggttgt tctgatttaa
      661 gattaaaaac atatgtaatg ttattggctt caactggttt gagggcaaca gaagcattgt
      721 ctattcggtt aaaagatttt gatactaata ataatgataa tcctacaaag ttgattatca
      781 ggggagaatt tacaaaaaca aaagtagaca gatatgtatt tttaacaaaa gaagtacaaa
      841 atcaaataaa aatctggtta gattacaaat atagaactcg tagaatttgt tataaagata
      901 aaagaactgg aaagactgta actgaatata gaactcctga aaaaaatcca gatgaactag
      961 ttttctcatt atatcacgtg aataaaccaa gtccagaagt attgtatgat aacttgacag
     1021 gaatttttgc aaaaacttta gatagaatcg gaatgggttc aagagaagat gaaaatgaaa
     1081 atagacgaag aaaaataact ttacattcaa tgagacgttt tgtcaaaact acaatatcag
     1141 acttgggata ttcagactat tcggagtggt ttattggtca ttctggttct acctactggc
     1201 gaaagaagga tagcgagaaa gcagagatct tcaagaaaat tgaaccttat ttgacttttc
     1261 taaatgttcc tcagttggaa agacagggag cagacttgca aacaaaaata gaggaattac
     1321 aggacataaa tcaactatta agatataagc aaaatgagaa agaggaacag attaaaaagt
     1381 tagaggagtc tgttgcattt ttagcagata aatttaatgc atttttagca agtcagcctg
     1441 gtaatacaat cctctatgat aatgatgaac aaacagatgt aatcaaagga atagaattaa
     1501 agccagaact aaataataaa gcagttggaa cagtaatctc tacttctact aataatagaa
     1561 gcaataagat aaagtaattt attaaaaaat tattgataat atgtgtttgt gtctgtttga
     1621 tttaggaggg aagcgttacc taaacttctt ctactggtca taacaagcac acgatattct
     1681 caaagaaccg atagttttct caaaaagata tatgagagaa attttaccgt cagaatcaaa
     1741 acaacaatca aagatcagag atcaaagcag taaatttgcg gcgctggcgc cgcaaaatag
     1801 cgcactggaa gaattcagac aagaaaaatt ataataactt cctaacgcta taattattga
     1861 taataacatg taatggcttt ggttgttggg gaaaatgctt cctcaaaata agaccttctt
     1921 tggttaataa caataggtag tttcctaaaa taaattttat aatatttttg tgtctgttta
     1981 aatttaggga agcattcccc aaactgattt ttttgcttat aattctcgtt ttttaacaga
     2041 aataagagat taaaataact gaggctgggt cataattatt ccattttcat aacgaataaa
     2101 gctagtttat tgatctgtat gatgttttgt ggtgtaacta tcatccaagc caataaacta
     2161 gcacagcaga aaagatcaac atctattcta attagtattt tgta
//
LOCUS       DATIAS010000372         2032 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1701460, whole genome shotgun sequence.
ACCESSION   DATIAS010000372 DATIAS010000000
VERSION     DATIAS010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701460"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..267
                     /locus_tag="VLA74_07560"
     CDS             130..267
                     /locus_tag="VLA74_07560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50600.1"
                     /translation="MQVKDEEIQELKKNDKIKEDALAHLSDQLLFLNERIQEIERKQS
                     K"
     gene            complement(505..1275)
                     /locus_tag="VLA74_07565"
     CDS             complement(505..1275)
                     /locus_tag="VLA74_07565"
                     /inference="COORDINATES: protein motif:HMM:NF017773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF50601.1"
                     /translation="MAKNNGPKLANFIIDYVDTCKQQHKKDTNIRLISHSLGARVLLS
                     TLEYLNTNSTWNNNDYKIASVHLLGAAVDNEEVSKNPLDIDGDSTIKHAYGKAIQEEV
                     VRFYNLYNPEDNMLQPKPFKPDNYIYEVYPSPSFENDLALGQSGKDTTIATQDQVSTP
                     PYYELNVQNQIPAIRNADAMEDKHYLLCFSSSGICEFTKKGSYDYGLCGGFTWDPICR
                     VGIGDNHGGYIGFRNLDNVNLLEDDGAMNIVVKNWRNP"
     gene            complement(1291..1692)
                     /locus_tag="VLA74_07570"
     CDS             complement(1291..1692)
                     /locus_tag="VLA74_07570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50602.1"
                     /translation="MLSNKNGIILLIMILLLSLLYSINLSTLDNIYASTDSIADTTSE
                     KSIPIYMITTRGDLNPPVEVQGDGYNGKYQFGNIDQLKKECPAEIVIFVHGWGNDEFK
                     AKERLDRVKMSLENNSYSNPLIGLSWDSNKD"
BASE COUNT          704 a          306 c          278 g          744 t
ORIGIN      
        1 aggaaatttt acaagattat ttaaaagcag tagatttaca caataaataa caatcaaaaa
       61 gttcttgaaa aacagattat tgaattaaaa gaaaacagta aagataatga atatatcgtt
      121 aaagcaaaat tgcaagtaaa agatgaagaa attcaagaac ttaaaaagaa cgataaaata
      181 aaagaagatg cattagctca tctatcagat caactactat tcttaaatga aagaatacaa
      241 gaaatagaaa gaaaacaatc aaaataatat gtagatttat ttattaagag gattctgtgg
      301 gatttgaacc cttctataaa gtgggaccaa ttgttttaat tcaattagat tttattacat
      361 ggttagcata gtttgaatat aaaatagaaa ttttattttc tgataatgct attctttttg
      421 tagtatagaa ttatatttat taattgtcaa tatgaacgta caatatcttt aaacaatatt
      481 attatgtcta tatctttatt tattttaagg atttctccaa ttctttacta ctatattcat
      541 tgctccatca tcttcaagta ggtttacatt gtccaaattt ctaaatccaa tatatcctcc
      601 atgattatct cctataccaa ctctacaaat aggatcccaa gtaaatcctc cacatagacc
      661 atagtcataa ctaccttttt tagtgaattc acagatgccg gaactggaaa aacacaaaag
      721 ataatgctta tcttccattg catctgcatt gcgaatagct ggtatttgat tttgaacatt
      781 tagctcataa tatggtggtg ttgagacttg atcttgtgta gctattgttg tatcttttcc
      841 actttgtcct aatgctaaat cattttcaaa agaaggagaa ggataaacct cataaatata
      901 attatctggt ttaaatggtt ttggttgaag catattatct tcaggattat acaaattgta
      961 aaatctgact acttcctctt gaatggcttt tccataagca tgttttatag tagaatcgcc
     1021 atcgatatcg agtggatttt tagatacttc ttcattatca acagctgctc ccaataaatg
     1081 cacagatgct attttataat cattattatt ccatgttgaa tttgtattaa gatattctaa
     1141 agtactaaga agtactctag ctcctagaga atggctaatt aatctgatat tggtatcttt
     1201 cttatgttgt tgtttgcatg tatcgacata atcaataata aaatttgcta gtttgggtcc
     1261 attatttttt gctatgtttt tggcagggcc ctaatctttg ttagaatccc aacttagacc
     1321 aattaatgga ttactgtagc tattgttctc taatgacatt ttgactctat caagtctctc
     1381 ttttgcctta aattcatcat tgccccatcc atggacaaaa attacaattt ccgcaggaca
     1441 ttccttcttt aattgatcaa tattaccaaa ttgatatttg ccattataac catcaccttg
     1501 tacttccaca ggaggattga gatctcctct agttgttatc atatatatag gaatagattt
     1561 ttctgatgtt gtatcagcaa tggaatcggt actagcatag atattatcta atgtcgacag
     1621 atttattgaa tataataatg ataatagcag tatcattatt aataatatta taccattttt
     1681 atttgataac attttttatt aattttccag tggtataata ttaaaagatt cccattatca
     1741 taataactaa agtaggaact aggagattgc tcatatgata ttgtaattct ttatattaat
     1801 atccatattt ctatcattat ctatagttac ggttgctatc atcagcaata gtggtggtca
     1861 tgaatcatta tttattgtat ttgctcaaat ggaaatagat aaaaatacaa atcaaaaaat
     1921 gctacatact caatctgtga atagtactat ccgcactttt tctgtcgtag ggactataag
     1981 ctctttagtc ataacagttc ctcaacatga atttaatata acaaatgcat tc
//
LOCUS       DATIAS010000373         2883 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_204514, whole genome shotgun sequence.
ACCESSION   DATIAS010000373 DATIAS010000000
VERSION     DATIAS010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204514"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(446..751)
                     /locus_tag="VLA74_07575"
     CDS             complement(446..751)
                     /locus_tag="VLA74_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50603.1"
                     /translation="MLLHYRRKLFLACLYESGSRPEEFLRLSNLDCKLDTNGAILILR
                     GKTGERRIRIVSFAKLLQQWLDVHPLKHQKQFPLWISQATNYNNQPLGLRGAQLIIK"
     gene            complement(705..1202)
                     /locus_tag="VLA74_07580"
     CDS             complement(705..1202)
                     /locus_tag="VLA74_07580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50604.1"
                     /translation="MRDLYNRKVRLERWIQRIHTELQDNEDDKQDILKFVTYLQEKDK
                     SILWIVRCITALLQLRKEIKKPFSQVTKEDIKKLFDWMNYKEYKASTHEKFRVILKIF
                     YKVVYGNNEVYPDCVKWFSVTVGKEIKSKEKALDIKEYLEEEIPILIENAPTLQKKAF
                     FSLLI"
     gene            2260..>2883
                     /locus_tag="VLA74_07585"
     CDS             2260..>2883
                     /locus_tag="VLA74_07585"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSF50605.1"
                     /translation="MNKKERYKKNSKINNKSLVYLDKKYIWHPYTQMKIWNKQDNVVI
                     THGDGFYLVSENGEKYLDGIANMWCSVWGYSSNPVIEATRKQFQELPHSTLFGLGNKP
                     SIVLAKKLLNLANGMSKIFFSDNGSTAMEVALKIAVQYWKNKQFPKKSKFLSLENGYH
                     GDTIATMSMGYVDRYFNPYKSLLIRTFKAPAPSSFENNLDNVLTDSEI"
BASE COUNT         1049 a          373 c          410 g         1051 t
ORIGIN      
        1 ttttgcaata ttattataaa atattgtagt tttgaagatt attttattga atattattcg
       61 tgttttgtaa gaaatgaaag aagaatgtag tcaatattta taatacaaat ttgatcatga
      121 ttgtatgcat ttctttcaaa aaataaattg ttataaataa aatataaatg aatattaaca
      181 attattatca taaaaagtta aagtaagttc tcaatcattt gtaaatttac gctatttttt
      241 ataatcggaa aagaataggg agaaaagaca aatgttaata aaaaagcgag tatcccaatc
      301 acaagtataa acattataac ataaaaaact aatttatcat agtcataaat taatatcata
      361 aatacatata ttattaaatg aaaattttaa atttactata aaaaaattag tgtatctata
      421 tatcaataga gactattctt atatatcatt tgattatcaa ttgggctcct cttaatccta
      481 aaggttgatt gttgtaatta gttgcctgac ttatccataa tggaaattgt ttttgatgtt
      541 ttaatggatg cacatctaac cattgttgca ataatttagc aaatgaaaca attctaatcc
      601 ttctttctcc tgtctttcct cttaaaatca atatggctcc atttgtgtct agtttacaat
      661 ctaaatttga tagtctaaga aactcttcgg gtcgactacc agattcatat aagcaagcta
      721 aaaaaagctt tcttctgtag tgtaggagca ttttctataa gtattggaat ttcttcttct
      781 aaatactctt tgatatcaag agctttttct ttacttttta tctcttttcc aactgttact
      841 gaaaaccatt taacacaatc aggatatacc tcattgtttc catatactac tttataaaat
      901 atctttaaaa ttactctaaa cttttcatgg gttgaagcct tgtattcttt ataattcatc
      961 caatcaaata atttctttat atcttctttt gtaacttgag agaatggctt ttttatctct
     1021 tttctcaatt ggagtaaggc agttatacat ctaacgatcc aaagtatact cttgtctttt
     1081 tcctgtaaat aagtaacaaa ttttaaaata tcctgtttgt catcctcatt atcttgtagt
     1141 tctgtatgta ttcgctgaat ccaacgttct aatcggactt ttcgattgta gagatctctc
     1201 atttcgtatt ttaaaacaat tgcttgatgt tgtttgccaa gaataatgct ttcggttgat
     1261 gtaggacaac gaaccgagga tttaatggag gggatgggat ttgaagccta cgagttgaat
     1321 ataggttaag agttttgtaa agacattcgt aagttatttg tgtaaactaa cgctaattac
     1381 tttgttttat tatctatgaa caacttcatt cagaaacaac caatccaaaa taatcacttc
     1441 tactttacat tatatactac caacttaatt acaagactgt taagggagta ttacatggtt
     1501 attgcatcta tcctgatgaa ataaggattt gaagataaac gaatgaatag atggatacaa
     1561 tacaattgaa taaagggcaa taggtctttt attgtatttt ggaagcagat tttacaacta
     1621 taaacaatac ttgatcttca aatgcatccg gaataaaata gcaaaaagtc ttctagttat
     1681 aatcatgagt atggaattat tttaatctgg ttatctggaa ttctctttct tttgttaata
     1741 tcatgaatat tggtatcttt gctgttaaaa ctcaatgttt attgggctcc ctaccttgtt
     1801 taatgcttga tttgtttagt ttgtttcttt tttatgctat gattttattt tttaattatt
     1861 atatacccac caattaattt attgaatatt tttgactttt tatatgttaa tatggaaata
     1921 cagttaactg ttaagatggg aatactttta tacaggataa cataataata gtaatatgta
     1981 aaaattattt ttaaattaga aaaagaattg aattgaaaat tgatgaagtt aatagtaaca
     2041 aaaaaatgat gattctattg attcattcaa gagtcaataa tcaaagcaat aaatatagat
     2101 gaagaaaaaa agatgataag aaaaaaccat atgggaaaga tgaaataata atacaatgat
     2161 aaaccattaa taatgataat atttcaaaac tcgagtttag aaatatttct attttactga
     2221 taattttatt aattatcttg actaacattt aacaaaagaa tgaataaaaa agaaagatat
     2281 aagaaaaatt caaaaataaa taataaatct ctagtctatc tcgataagaa atacatttgg
     2341 catccatata cccaaatgaa aatctggaat aaacaagata atgtggtaat cactcatgga
     2401 gatggatttt atctagttag tgaaaatgga gaaaagtatc ttgatggaat tgcgaacatg
     2461 tggtgcagtg tatggggtta tagttcaaat cctgttattg aagcaacaag aaagcagttt
     2521 caagaacttc ctcattctac tttattcgga ttgggaaata aaccttcgat agtacttgct
     2581 aaaaaacttt taaatttggc caatggaatg agcaaaattt ttttttcaga taatggttcg
     2641 acagctatgg aagtggcatt gaagattgct gttcagtatt ggaaaaataa acaatttcca
     2701 aaaaagagca agtttctctc acttgagaat ggttatcatg gagatacgat tgcgacaatg
     2761 tccatgggtt atgtagatag atatttcaat ccatacaaat ctttactaat tagaacattt
     2821 aaagctcctg caccatcatc atttgaaaac aatttagata acgttctaac agattcagag
     2881 ata
//
LOCUS       DATIAS010000374         4191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1430728, whole genome shotgun sequence.
ACCESSION   DATIAS010000374 DATIAS010000000
VERSION     DATIAS010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4191
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430728"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..887
                     /gene="nadA"
                     /locus_tag="VLA74_07590"
     CDS             <1..887
                     /gene="nadA"
                     /locus_tag="VLA74_07590"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HSF50606.1"
                     /translation="ILAHNYQLPEIQDVADFIGDSLALSRKAEKTSAKTIIFCGVHFM
                     AETASIICPDKNVLIPDITAGCSLASSINPTELTYWKKDHPDAIVVSYVNTSAEIKAL
                     SDYCCTSSNAVKVVNSISPNNDILFLPDMFLGSYVAEVTKRKNMFIWPGECHVHAGIR
                     AEDINKMMKQYRNAEFLVHPECSCTSSTMYHMAKGDLVNEGHILSTEGMMQQAKNSSK
                     SDFIVATETGILYRMQKENPTKNFIPIKKDAVCQYMKKITIDKVYNSLLNNVYQVKVP
                     QSISRKARSAIDRMLSIG"
     gene            1087..1926
                     /locus_tag="VLA74_07595"
     CDS             1087..1926
                     /locus_tag="VLA74_07595"
                     /EC_number="1.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF009828.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HSF50607.1"
                     /translation="MKKNISIIGCGAIGSELALSVDRMMIENVNISSFLDIKLENAEI
                     LKSKLSNNNPIVFNNFSDYIKSDTFKDVDLVVEAASQNALTSYLNPIILLKKDILVMS
                     VGAFANPDFFSQVIKNVEKNDINLYVPSGAIAGIDAIKSVRSSISYVTLTTTKNPNSL
                     KDSPFFKKTNLTVDSIKKRTLLFEGSAIEAVQNFPANVNVAALLGLASIGVEKTKVNV
                     IADPSLRINKHEIKVIGKFGELIVRVKNVPSATNPKTSYLAILSVIELLRSITTKGIK
                     YGT"
     gene            2019..2405
                     /locus_tag="VLA74_07600"
     CDS             2019..2405
                     /locus_tag="VLA74_07600"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HSF50608.1"
                     /translation="MINNIIAIIVISFIIVGSLWGIGNLLNPQEENNLNSPGILLLAE
                     NNFFNKTNPTLYINSNIPQKITIANKDFVRHDFIIDELNINTGYLYSNQDFTTAIASR
                     ESGIFEYYCSLHPSTMRGKLVISETR"
     gene            2483..2776
                     /locus_tag="VLA74_07605"
     CDS             2483..2776
                     /locus_tag="VLA74_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50609.1"
                     /translation="MFNSDSGKNNYDKKKFQKINLGIRQTVLERARYRCQGCSIKFNT
                     QEIPFFSHINGSLKDNRPANLKALCKECYAKTGENKIKDNMVGKIRSIIRRVI"
     gene            3053..3229
                     /locus_tag="VLA74_07610"
     CDS             3053..3229
                     /locus_tag="VLA74_07610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50610.1"
                     /translation="MPIILQLICDQCKKVILEKSGEENLSLEKFPITNEETELLNKEH
                     RGHECHIEAVEKID"
     gene            3408..>4191
                     /locus_tag="VLA74_07615"
     CDS             3408..>4191
                     /locus_tag="VLA74_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50611.1"
                     /translation="MSKGITITSTISSIFLLTLLTIGLQNNDNAVFAQESEIETVNAT
                     GAQQQESGAQAGNATSNATATKEKPDAATISIGESFAQQGTLTSIQDPLPGHEGHQIA
                     IILPPRDDSAIYEGTLTFTSSKPTEVVILQNFANDTNVDAFYGGVATAPLGEGTVAIS
                     LLTPQFGPIASASIPFAGNALALHNIEGEPFAATYTVSGSVDQAQTFNSITPAPLAEA
                     TEEEAGAADDGKGDGDDGKGDGDDGKGDGDDGKGDGGDGNGDG"
BASE COUNT         1534 a          592 c          665 g         1400 t
ORIGIN      
        1 ttattctagc acataattat caattacctg aaattcaaga cgtagctgat tttattggag
       61 attcattagc tctttcaaga aaagcagaaa aaactagtgc taaaactatt attttttgtg
      121 gtgttcattt catggcagaa actgcttcta ttatttgtcc agataaaaat gtattaatac
      181 cagatataac tgccggttgc tctcttgctt cttctataaa tcctactgaa ttaacatatt
      241 ggaagaagga tcatccagat gctatagttg ttagctatgt taatacttct gcggaaatta
      301 aagcgttatc agactattgt tgtacatcct ctaatgctgt aaaagtagta aatagtatat
      361 caccaaataa tgatattctt tttcttcctg atatgttctt aggttcatat gtagcagaag
      421 ttaccaaaag aaaaaacatg ttcatctggc caggcgaatg tcatgtacat gcaggtatcc
      481 gtgcagaaga tattaataag atgatgaaac agtacagaaa tgcagaattt ttggtacatc
      541 cagaatgcag ttgtacatcc tcaactatgt atcatatggc taagggtgat ttggtaaatg
      601 aaggtcatat tttatctact gaaggtatga tgcaacaagc taaaaattca tctaaaagtg
      661 attttattgt agctactgaa acaggaatat tatatagaat gcaaaaagaa aatcctacaa
      721 aaaattttat tccaattaaa aaagatgcag tctgtcaata tatgaaaaag attactatag
      781 ataaagttta caattcgtta ttaaataatg tatatcaagt gaaagttcca caatcgatat
      841 ctcgtaaggc tagatctgca attgatagaa tgttatcaat cggttaataa tttatatata
      901 tttgattcct gcaaagaaaa taaaaaaaat aatctattaa ttatgaccat ggaaaagtac
      961 ttttgtttga aaaagagaaa tgtcatttta attaagagat cttgaaattt ttaaactaca
     1021 aaaataatcc agaattgatt ttaggaaact attttaattg ataaattgaa gatgtttatt
     1081 aaccatatga aaaaaaatat atcaataata ggttgtggtg ctataggaag tgaacttgca
     1141 ctttctgtag atagaatgat gatagaaaat gtaaatattt catctttcct tgatattaaa
     1201 cttgagaatg ctgaaattct caagtcaaag ctatcaaata ataatcctat agtctttaac
     1261 aatttttctg attacatcaa gtctgatact ttcaaagatg tggatctggt ggtcgaagct
     1321 gcttcccaaa atgctctcac aagttatctg aatccaatta ttttattgaa aaaggatata
     1381 ttagttatga gtgtaggtgc ttttgctaat cctgattttt tttctcaagt gataaaaaat
     1441 gtagaaaaaa atgatatcaa tctttatgtt ccatcaggag ctattgctgg tattgatgct
     1501 attaagagtg tcagaagttc aataagctat gttacactta caactacaaa gaatccaaat
     1561 tctcttaaag attctccatt ctttaaaaaa actaatttaa cagtagattc tattaaaaaa
     1621 aggactttgc tttttgaagg atcagctatt gaggcagtcc aaaattttcc tgctaatgta
     1681 aatgttgcag cattgttagg tcttgctagt ataggtgttg aaaaaacaaa ggttaatgta
     1741 attgcagatc cgtctcttcg tattaataaa catgaaatta aggtaatagg aaaatttgga
     1801 gaattgatag taagagttaa aaacgttcct agtgctacta atccaaagac aagctattta
     1861 gcaatattat ctgtcattga attgcttcgc tcaattacta caaaaggaat aaaatatggg
     1921 acataaaaat catttaacaa ataatacaat ggatttgaat tatttattct cttattgtct
     1981 agttagcaaa aaaatttgaa atttaaaagt taacgatcat gataaataat ataattgcaa
     2041 taattgtaat ttcttttatt attgtcggtt cattatgggg cattggtaat ctattaaatc
     2101 cacaagaaga aaataatctt aattctcctg gtattttatt acttgctgaa aataattttt
     2161 ttaataaaac aaatcctaca ctttatatta atagtaatat tcctcaaaaa atcactattg
     2221 caaataaaga ttttgtcaga catgatttta ttattgatga attaaatatt aatacaggct
     2281 atctttattc taatcaagat tttaccacag ctatagcttc aagagaatca ggaatattcg
     2341 agtattattg ttctttgcat ccatctacta tgcgtggaaa attggtaatt tccgagacta
     2401 gataattttc aattcttttt atataatctt attagatgct ttcgaaaaag ttaattctaa
     2461 ggaattggta atatgatctc tgatgtttaa ctctgattca ggaaaaaata attatgataa
     2521 aaaaaaattc caaaaaatta atttgggaat acgacaaaca gtacttgaaa gagcacgata
     2581 tcgatgtcaa ggttgttcta ttaaatttaa tacacaagaa attccttttt tttcgcatat
     2641 taatggctca ttaaaagata atcgtcctgc taatcttaaa gcactttgta aagagtgtta
     2701 tgccaagact ggagaaaata aaataaaaga caatatggta ggaaaaattc gatctattat
     2761 taggcgcgta atttaactac atttattatt cattcattct tcattcattc taaatttttt
     2821 ttataaatta ctatttcgat ttaagaaata attctttatg ttcttgacag caaaaatgtt
     2881 caattttgaa aacccctcgg ttagaatctc cttcaatatg cggccatcct aaatcaaaga
     2941 acttttctcc acaataagcg caaatcttaa agtccattta taataatttt taaaaataga
     3001 ataaattctt ttttttaata acttatatat tcattgtata tgttatttaa ctatgcctat
     3061 aatacttcaa ttaatttgtg atcagtgtaa aaaagtaatt ttagaaaaaa gcggggaaga
     3121 aaatctcagt cttgagaaat ttccaattac aaatgaagag acagaattat taaataaaga
     3181 acatagaggt catgaatgcc atatagaggc ggtagaaaaa atagattaat tttttatttt
     3241 caaagaaaat tatctggtaa tttctattat atataataaa ctgaatatat ttttcaaatt
     3301 taaataaaat atttctcttc tttttctatt atagattatt ttgacgaaaa ataaaagaga
     3361 atgttataga ggaaactata aatttaatgt tttatcccat agtcctaatg tctaaaggta
     3421 taacaataac ctcaacaata tcaagcatat ttcttttaac actcctgaca attggtctgc
     3481 aaaataatga caatgctgtt tttgctcaag aaagtgagat tgaaacagta aatgctacag
     3541 gtgctcaaca acaagaaagt ggtgctcaag caggtaatgc tactagtaat gcaaccgcta
     3601 ctaaagaaaa gcccgatgct gctacaattt ctataggcga atcctttgct caacaaggaa
     3661 cattgacgtc tatacaagat ccattacccg gacacgaagg tcatcaaata gcaataattt
     3721 tacctcctag agatgatagt gcaatatatg aaggaacatt aacatttact tctagtaaac
     3781 caacagaggt agtaatatta caaaactttg caaatgatac taatgtagat gcattttatg
     3841 gtggtgttgc cactgcgccc ttaggagagg gaacagtagc aataagtctt ttgactccac
     3901 aatttgggcc tattgcttct gcttctattc catttgctgg taatgctctt gcattacaca
     3961 atatagaagg agagccattt gctgctactt atacagtcag tggtagtgta gatcaagctc
     4021 aaacttttaa ttcaataact cctgctccat tagcagaagc tactgaagaa gaagcaggag
     4081 ctgcagatga cggtaaaggt gacggcgatg acggtaaagg tgacggcgat gacggtaaag
     4141 gtgacggcga tgacggtaaa ggtgacggcg gagacggtaa cggtgacggc g
//
LOCUS       DATIAS010000375         2232 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_476736, whole genome shotgun sequence.
ACCESSION   DATIAS010000375 DATIAS010000000
VERSION     DATIAS010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476736"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1165..1279
                     /locus_tag="VLA74_07620"
     tRNA            join(1165..1179,1220..1279)
                     /locus_tag="VLA74_07620"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1241..1243,aa:Asp,seq:gtc)
     gene            1456..>2232
                     /locus_tag="VLA74_07625"
     CDS             1456..>2232
                     /locus_tag="VLA74_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50612.1"
                     /translation="MSRTKNIESAFKIKYETKYLFLGFIIAIAVAIVFIHIILFITDG
                     DKYIGTTSAVLLGSASCLLLFTILSNTRNIEVQRFKLLFVGVTLWFLGEFSYTYYQIV
                     LDTDAPYPGVGEIFYVAGYVPLILFAYRSFKTINRNGLIKRRVIAFVVTLASVAPVIV
                     TILVFSQEVDFQSQWPDIVISTITNGGDIVLLSLSILILTKLPRNNPYIYHWILFTSF
                     LILTTITDFFYLNIAIVDEEFLLETELIWEAMWAFAYLCIL"
BASE COUNT          742 a          332 c          350 g          808 t
ORIGIN      
        1 gctccgctta tagatatatg taatctttga aggtcattat tgaacgaatt tataatgtct
       61 tctaaattat atctttctgc atcattcgta ctataccatc gtttgatctc tttcaaacat
      121 aatatgctta gcattatgat acatagcatg cagtatgtga cgttcctcac acagatccaa
      181 aatctggtca catttcaaaa tttgatttgt aaaaattgtg aaaagttgta tataataacc
      241 tataatatct tacaatatcc caacagcaat taaaaatttg gtaatggaat attttaccat
      301 attaatgtca ttattataat caataagata aaatttgtac aatatagaaa tatttctata
      361 atcaaatcct cgtatttttt agtcataata caaatctaat aatgtaagga caatattatc
      421 ccgaaaataa tagattttat tttaaataca ggtaaattaa aagattagca gaactccttt
      481 gcagaattaa gtctgtcacc taatagcaga cacatgtaaa ccgattagag atataaggtt
      541 cgagaaatat ttgttaaaga aattttattg gtgtatgggt tggattatta taacaagaaa
      601 ataaatgttt tctaatgaaa aaacttgttc attatattaa gggaactagt atttttaata
      661 ctgtgggtgc agaatattgt attgttatat tccagtattt gctatctatt tccatatttt
      721 ttcgtttgta atatcagatc atagattgaa gcatccactt aagcaaattc tagtgatact
      781 gacggtgggg gtaattcttt actcgatttt ccccattaga ttattccatt ctaaaaagta
      841 ggcaacttac aaacggtttt gtctcattca tatcagaatc ttcaattaat gcagatttat
      901 aagataaaaa ctagtgtttc ctgataaaat cgcgatatat aaaatgaata tgcttctaat
      961 ctaaaaaaat tgtacttttt gtatattatc atatagtatg taatatatct aacatttgaa
     1021 aattgtttga agaaagtcaa tttattttca ttttattgtt aatcagcgac tttaattttg
     1081 gacctatttt aataaccaag gataatgact ttgcattagc aaaagaaaaa tattttaagt
     1141 gctttaataa aacatcctta atgcgcccgg gtagtataga gatgttttga ggattattgt
     1201 ttaatcaaac atcgtatatt ccggttcagt atgggggact gtcactcctt cgacccgggt
     1261 tcgaatcccg gcccgggcgc ttaacacctt tagcgacgct ttatatggtt tctacttcta
     1321 atattaagga gcagggaaat ggataatgag ctaatcaata taagccccta tcaaatgttt
     1381 ttgttacata ttagatcatc taaaacaaaa agtcaatgga ttaatttaaa taattcgcaa
     1441 aaaatacata tttaattgag cagaacaaaa aatattgaat ctgcttttaa aataaagtat
     1501 gaaacgaaat atttgttctt aggatttata attgctatag ctgtagctat cgtgtttata
     1561 catataatac tgtttattac tgatggcgac aaatacattg gcacaacctc agcagttttg
     1621 ttgggatcag cttcctgttt attattgttt acaatacttt cgaatactag aaatatagaa
     1681 gttcagagat ttaagctgct tttcgtagga gtaactctct ggttccttgg tgaattttcc
     1741 tatacgtatt atcaaattgt attagatacg gatgctccat acccaggtgt cggggaaatt
     1801 ttctatgttg caggctatgt gcctctaata ctatttgcct acagatcatt taagactata
     1861 aacagaaatg gattaataaa acgtagggtg attgcgtttg tagtaacact cgcatctgta
     1921 gcacctgtaa tagtaactat cctggttttt agccaggaag tagattttca atcccagtgg
     1981 cctgatattg tgattagtac cataactaac ggtggcgata ttgttttatt atctctttcg
     2041 attctcattc taacgaagtt acctagaaat aacccttata tctatcactg gatattattt
     2101 acctctttct tgatattaac aactatcaca gattttttct atttgaatat agcgattgtt
     2161 gatgaagaat ttcttttaga gactgaattg atatgggaag cgatgtgggc gttcgcctat
     2221 ctatgcattc tt
//
LOCUS       DATIAS010000376         2188 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1293071, whole genome shotgun sequence.
ACCESSION   DATIAS010000376 DATIAS010000000
VERSION     DATIAS010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1293071"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VLA74_07630"
     CDS             <1..1041
                     /locus_tag="VLA74_07630"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HSF50613.1"
                     /translation="GVEISREGEIKVEEIFYSRKFAKIDGTNKTISDENIINDYIDKV
                     LSLIDVDKIKSRSFKVVMDLGNGVQSLVAPYLLKKLGCQVFTINSNIDGDFPGRGPEP
                     TVDNLNILSNMVKDLNADFGVAYDGDGDRSIFCDEKGIIHPGDKTAAVLVKYLISGKD
                     REAEIVCPINTTLNVQLVADEGNSNVIYTKVGSVEVSREMIKRNSLIGLEENGGFMYG
                     KLNQVRDGAMTTALVLDMLTNFISTDKTTNSFSDIIASLKKIAQFKTKFKCPSMEIAK
                     KIVIKCSEHGSPKKIEKLDGAKMWIDDESWIMIRPSGTEPLIRMYGESISQTLLDSKV
                     REYTRIIESMLS"
     gene            1117..2034
                     /locus_tag="VLA74_07635"
     CDS             1117..2034
                     /locus_tag="VLA74_07635"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HSF50614.1"
                     /translation="MKSPPPPNTPPNKIHDSKKTLIEITVVGKDRKGVVAEITNFIFK
                     NHGNIEKINQNVIKGLFGMQLEASFNNIIKENLDEGLQALAKNLKMEIKVHYQEPNRL
                     TNIAILVSNEDHCLLKILDSYNKKELKTKIPLIIGSSDSLKPIAEKLKVPFYLIDHKD
                     QTEAERQILKLFEEYNIDMVILARYMRILTPNFVWRYPNKIINIHPSLLPAFPGAYAY
                     VQAYERGAKIVGCTAHFVTEELDQGPIICQKSFNVLESDNIDTIKNKGRKLESSTLLE
                     AIKLALEGKLEVYWGKVHVKKIKQNRIKK"
BASE COUNT          910 a          255 c          382 g          641 t
ORIGIN      
        1 ggggtagaga tttcaagaga aggagaaata aaggttgaag agatttttta tagtaggaaa
       61 tttgcaaaaa tagatggaac aaataagact atttcagatg aaaatattat aaatgattac
      121 attgacaaag tcttatctct aatagatgtt gataaaataa aatctagatc atttaaagta
      181 gtaatggatt taggaaatgg tgttcaatct ttagttgctc cctatttgtt aaagaaatta
      241 ggctgtcagg tttttacaat aaatagcaat attgatggag attttccagg tcgagggcca
      301 gaaccaactg tagacaattt aaatatatta tcaaacatgg tgaaagattt gaatgctgat
      361 tttggtgttg cttacgatgg agatggagat agaagtatat tctgtgatga aaaaggaatt
      421 attcatcctg gcgacaaaac tgctgctgtt cttgtaaagt atttaataag tggtaaagac
      481 agagaggcag agattgtatg tcctattaat acaactttga atgttcaact tgttgctgac
      541 gaaggaaatt caaatgtaat atatacaaaa gtaggaagtg ttgaagtctc tagagaaatg
      601 attaaaagaa attcacttat tggtttagaa gaaaatggag gatttatgta tggaaaacta
      661 aaccaagtta gagatggtgc aatgaccaca gcgcttgtat tagatatgct tacaaatttt
      721 atatctactg ataaaacaac taattcattt tctgatatca tcgcatcact taaaaaaata
      781 gctcaattca aaactaaatt taaatgtcct tcaatggaga tagctaaaaa gatagttatc
      841 aagtgttctg agcatggatc cccaaaaaag attgagaaat tagatggtgc taaaatgtgg
      901 attgacgatg aatcatggat aatgattaga ccaagtggaa ctgaaccatt gataagaatg
      961 tatggagaat cgatttcaca gacattgtta gattcgaaag ttagagaata tacaaggata
     1021 attgaaagta tgttatctta ataaaaaaat ttatatcgcc aacaaaaaac atcaaaaata
     1081 ttaaaaataa aaaaaggaat tatagataga acagaattga agtcaccacc accaccaaat
     1141 acaccaccaa ataagatcca cgatagtaaa aaaactttaa ttgaaataac agtcgtagga
     1201 aaagatagaa aaggagtagt tgcagaaatt acaaacttta tttttaagaa ccatggaaat
     1261 attgaaaaaa taaatcaaaa tgtaataaag ggtctttttg gtatgcaact tgaagcttca
     1321 tttaataata taataaagga gaatttagat gagggacttc aagcacttgc taagaattta
     1381 aagatggaaa ttaaagttca ttatcaagaa ccaaacagat taacaaatat tgctattctt
     1441 gtaagtaatg aagatcattg tctattaaaa atacttgact cttataacaa aaaggaactt
     1501 aaaacaaaaa tcccgcttat aattggaagc tctgatagct taaaaccaat agctgaaaaa
     1561 ttaaaggtcc cattctattt gattgatcat aaagatcaaa cagaagcaga aagacaaatt
     1621 ctgaaattat ttgaagagta taatatagac atggtcattc tggctcgata tatgagaatt
     1681 cttactccta attttgtttg gagatatcct aataaaataa taaatattca tccatcgtta
     1741 ttgccagctt ttcctggtgc atatgcttat gttcaagcat atgaaagagg agcaaaaatt
     1801 gtaggttgta ctgcccattt tgtaactgaa gaacttgatc aaggtccaat catatgtcaa
     1861 aaatctttta atgttttaga aagcgacaat atcgatacaa ttaaaaataa aggaagaaaa
     1921 ttagaaagtt ctacgttgct tgaagctata aaattagctt tggaaggcaa attggaagtt
     1981 tactggggaa aggttcatgt taaaaaaata aaacagaata gaataaagaa atgaattcaa
     2041 aaaaaaagat ataatataat atgaatattc attctattct taaagaagag agaaaaacac
     2101 aaaataataa aaatcatttg gacaaatata aaaagactaa cgatagaaga tatatgtaga
     2161 tattgttaga aaatgaataa catataca
//
LOCUS       DATIAS010000377         2443 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1565563, whole genome shotgun sequence.
ACCESSION   DATIAS010000377 DATIAS010000000
VERSION     DATIAS010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1565563"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..622)
                     /locus_tag="VLA74_07640"
     CDS             complement(128..622)
                     /locus_tag="VLA74_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50615.1"
                     /translation="MHPTNTEKSSSSSIPSDEKEEWIDLLNESVHTSEDIDIGDIYAV
                     SRNFVVVMRGLINVHYYYIPISKVEGWDDNVLWLNISENQVNEKYERNKIPDPRRYFV
                     KDYPYYNIYLRSLSLIPSKKRSTYYYDILPKRNSKMSFKCDLCKEIFLSEDQLDQHMK
                     LNIH"
     gene            1076..1267
                     /locus_tag="VLA74_07645"
     CDS             1076..1267
                     /locus_tag="VLA74_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50616.1"
                     /translation="MYAWLDILAAAAMALSSVTVVGNSLLFERYKPKFAITKKKTEKL
                     YFNRDLKEAYIPQQSSTNI"
     gene            1317..1544
                     /locus_tag="VLA74_07650"
     CDS             1317..1544
                     /locus_tag="VLA74_07650"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HSF50617.1"
                     /translation="MTKLEKAFFKVVGMYCTTCKPIVEKQVKDEPAVKRIDINYMTDS
                     VIIEYDSSSLTKEEIKVKLEKSGYKFVRVTK"
     gene            complement(1926..>2443)
                     /locus_tag="VLA74_07655"
     CDS             complement(1926..>2443)
                     /locus_tag="VLA74_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50618.1"
                     /translation="YKSVSSNMYILNEFPYPVMAKTYVDVTTGSPPIQFQYILTETGK
                     GQPKIPQSSIMEVTPPLLQRTARGDYFMELNWDPIPIMAGKETTFTLDILDKDKFPLT
                     QVSYDFTVTDSNDTTITDLQNQRAQQGTQSHTMTFDKPGLVNVKVKVNSVKGVSTGMF
                     VEQVVFKVPVK"
BASE COUNT          890 a          313 c          355 g          885 t
ORIGIN      
        1 ctacgaaaca gaatataatc tattatgtac tgtaagacgg tatcttagat ctatgggtag
       61 ttggcttaaa ttctgatact taacttagtt cataactata atttctttta ttctaaaata
      121 aaaatcgtta atgtatattt agtttcatat gttgatctaa ttgatcttct gaaagaaata
      181 tttccttaca aagatcacat ttgaatgaca ttttagaatt tcttttaggc aaaatatcat
      241 aataataagt ggatctcttt tttgagggta ttaaagataa tgatcttaaa tatatattat
      301 aataaggata atcctttacg aaatatcgtc taggatcagg aattttattt ctttcatatt
      361 tttcattgac ttggttttca gaaatattta accagagtac attatcatcc catccttcta
      421 cttttgagat tggaatataa taataatgaa catttatcaa tcctctcatt acaactacaa
      481 agtttctgct tactgcataa atatcgccta tatctatatc ctcgcttgta tgaaccgatt
      541 catttagcag atctatccat tcttcttttt catcagatgg aatggaagag gatgaagatt
      601 tctccgtatt tgttggatgc atatattact ttgatagtat gtaaattatt taaaaattaa
      661 ataataaaaa atttttttta tcaaaagcaa gtatagatta aaactcagga ttgctcttta
      721 tagaatttgt atctttgaat acagaaatta attgattatt caaaatttta tatcactaga
      781 gtaatagctt aattaagaag aaaaccatag ccatcctcta aaatgagtag ctgtgaatat
      841 agatttagaa gagggctatg gtatggatta tatttttgtc tttgaatcta cgtctcagct
      901 tatagcactt gacagacaga atagattagt aagtgtatat aagacaaata tatttattgt
      961 ttgattaaca ttgttagtta acaaaattaa ttattgaatc taaaattgtc atagcctgaa
     1021 ctaagatgaa caataacatt cccctgatag ttcagttcca gttataggtg caggaatgta
     1081 tgcttggctt gatattttag ctgcagctgc aatggctctg agttcagtca cagttgtagg
     1141 taattcactt ttgtttgaaa gatataagcc aaagtttgca ataacaaaaa agaagacaga
     1201 aaaattatat ttcaataggg atctaaaaga ggcatatatt cctcaacagt cctcaacaaa
     1261 catataattt acatttgtga caatataaga tataataatt ttgaagagaa agataaatga
     1321 ctaaattaga aaaagcattc tttaaggtag ttggtatgta ttgtacaaca tgcaaaccga
     1381 ttgtagaaaa acaagtaaag gatgaaccag cagtaaagag aatagatatc aattacatga
     1441 ctgatagtgt tataatagaa tatgattcgt catcattaac aaaagaagaa atcaaagtaa
     1501 aattggaaaa atctggatat aagtttgtta gagtaacaaa atgattttga tactaatctt
     1561 taaatatata tatttggcta aaagtaaact ataaaaaaac caaaaaaata tttgatttca
     1621 tttgaagaac aagatttaaa cattgaatat gttttttaaa ttcttcatat tatataaatt
     1681 agaaaggact agaaaaaggt acaacaatga ttcaatagga ttttccagat aaaatttatg
     1741 ggatttgaat tctattaatt ttaatatata ttatgataga aataacaata acaaaggtcc
     1801 ataaattacc ataatttatt tttatctgat aagactggtt atttatttat ttatttattt
     1861 atttattgta tatattatca acaaaaatat tattttattt ctgaaaaaaa gactgaaaaa
     1921 atgatttatt ttaccggaac cttaaaaact acttgttcaa caaacattcc agtacttact
     1981 cccttaacgc tattcacttt taccttaaca tttactagcc caggtttatc aaatgtcata
     2041 gtatgagatt gtgtgccttg ttgtgctctt tgattttgta aatctgttat tgtagtatcg
     2101 tttgaatcag ttacagtaaa atcatagcta acctgagtta atggaaattt atctttgtct
     2161 aatatatcta aagtaaatgt cgtttctttc ccagccatta ttggaatagg atcccagttc
     2221 agttccataa agtaatctcc tctagcagtt ctttgtaaaa gtggaggcgt tacttccatt
     2281 atcgatgatt gaggtatttt tggttgacct ttacctgttt ctgttaaaat atattgaaat
     2341 tggataggag gtgagccagt agttacatca acataggttt ttgccatcac cggatatgga
     2401 aactcattta aaatatacat attactggat acagatttgt aat
//
LOCUS       DATIAS010000378         6399 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_67832, whole genome shotgun sequence.
ACCESSION   DATIAS010000378 DATIAS010000000
VERSION     DATIAS010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6399
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67832"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(498..962)
                     /locus_tag="VLA74_07660"
     CDS             complement(498..962)
                     /locus_tag="VLA74_07660"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HSF50619.1"
                     /translation="MNYDSNNNSCIFCSIINGAIEGAIVYENNDFLVIMDKYPITTGH
                     TLVIPKKHYDNLLFMSPKEVGELYSLVRIISKAVVSAICADGFNIGQNNGRSANQIIR
                     HVHVHIIPRFKNDNPNGRWPTRYIANETELLDYSEKIKNRLDPSIKSNFIVN"
     gene            1088..1276
                     /locus_tag="VLA74_07665"
     CDS             1088..1276
                     /locus_tag="VLA74_07665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50620.1"
                     /translation="MVETIDIDNFNIYLSFKCPKCEYQNDEISGADLTNGSAECGMCE
                     TIFKIEGLDTIKITAFIE"
     gene            1365..3059
                     /gene="ilvD"
                     /locus_tag="VLA74_07670"
     CDS             1365..3059
                     /gene="ilvD"
                     /locus_tag="VLA74_07670"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSF50621.1"
                     /translation="MKLPSRKTLDGPSRSPHRAMYKAMGLKDDDLNKPLIGVSSTSNE
                     ATPCNIHLGKLAQFSKKGVSDCNCTPREFTAIAVSDGIAMGHEGMKASLVSREIIADS
                     IEVMMRAHQYDGLVGISGCDKSLPGTLMGMARLNLPSIFVYGGTIMPGSWNNRDVTIQ
                     DVYEAVGSFEAGNINLEELLQLENVACPSAGSCGGMYTANTMASISEALGMSLPGSAS
                     PPAESERRNEICYETGKKIYDLVENNICPKDILTFEAFENAIAITNALGGSTNAVLHL
                     LAIAKEIGVKLTLKDFERVRKRTPHIVNMRPGGIYVMLDLDKIGGIPIILKSLLKKGL
                     IHGEALTVTGKNMKKNLESFTINVSIDENVLTSFDRPLHSEGTLKIMKGSLAPDGAVV
                     KIAGVNSTEFIGRAKVFESEEEAFREISRKKIVEGDVVIIRYEGPRGGPGMREMLSVT
                     AALVGQGLGEKIAMVTDGRFSGATRGFMIGHVSPEAMLGGPIALVKNGDSIRIDIKKG
                     KIDLDLSKTELGRREKKWKPLKPHYKTGALAKYASLVSSASEGAITRPIIESKNQR"
     gene            3727..4020
                     /locus_tag="VLA74_07675"
     CDS             3727..4020
                     /locus_tag="VLA74_07675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50622.1"
                     /translation="MITPEEFQYWANKIKTRSQERINDSDENRIRLTTNPRIYPWFEF
                     IVDSRDTEAIDSIIYMIKENLNSIPEEFRSEFQQVLLDALDRRKNRKNTGYFY"
     gene            complement(4277..5113)
                     /locus_tag="VLA74_07680"
     CDS             complement(4277..5113)
                     /locus_tag="VLA74_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50623.1"
                     /translation="MSFSLDEIQKAYSYYKQYKLQNPPLHHERFIFPLFSGTYFCYRK
                     IDILRIVSIAKSLSQDPSFVDVGCGNGDFLTKIKKYLPKAVGIEQNAALYYILNRPKP
                     DYVHSYPIEVLNYRKNYFDIVFVGWMQPGIDFRRHITRLTKCIITTFDAGGQCGVNGG
                     CEYEEFGFKKLASWRSPSWIDVNGELMNKFYEEGLKLAKNNHLSNLRTAHNLWYVYST
                     PEQSDKITRALKDYYKEERRLYLSERFDFEDLLDSCGFCYEEKLLLQPSSEKHLWKIE
                     FH"
     gene            5267..5485
                     /locus_tag="VLA74_07685"
     CDS             5267..5485
                     /locus_tag="VLA74_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50624.1"
                     /translation="MGRSFDDWWTTVPADLKEKARRGDENNKPLLNQVNYVLLHLHLA
                     GKHDVKPSHEELKDWLHSGQVDVLRTNK"
     gene            5659..5952
                     /locus_tag="VLA74_07690"
     CDS             5659..5952
                     /locus_tag="VLA74_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSF50625.1"
                     /translation="MTIAILPDIDEQRCIGCALCVEICTALGPDVLRVKPVEGWKRGK
                     AFVFYPERCISDGACVGVCPTHAIFWMRPMEYTPGQPVPLHKNGVFDKGWEEG"
     gene            6055..>6399
                     /locus_tag="VLA74_07695"
     CDS             6055..>6399
                     /locus_tag="VLA74_07695"
                     /inference="COORDINATES: protein motif:HMM:NF024635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50626.1"
                     /translation="MTRIGITGNPGVGKHTVSKLLSKNKGLSIIDINKIIISNHAFVT
                     KNSKMEINMKKARELVKDQVKNENIVIVGHLLPYLIRKEELDFVIILRRSPYSLIEEY
                     KRRNYSIEKIQEN"
BASE COUNT         2328 a          890 c         1063 g         2118 t
ORIGIN      
        1 gtagcaaaga attttagtca ttctttgatt gaaaaatatg aaaaacatac tgtctacact
       61 gatgatgtta ctagatatcc acaatcttga acttttttac acctaaaaca cagaatgcat
      121 tctctttaga agaccctgat agaacgagta agcagtattt caaatagaac cgatgttttg
      181 atgattacta ttcatctatt aacaacaaca acaagaacaa caagaacaag aacagaaaat
      241 gtgatctagt acatgtacag aatctgatta gattgtttat tcatttatac aatataacaa
      301 tcaaaacaaa aatatagttt catttttcat taaaattgct taatagcatc aaatcttaca
      361 ttatatttta aatgttccta ttaaaattaa attatttcaa acatgttatg attcgaggag
      421 atatcaaaat gtaaaccaat ttttaagtat tgaataaatc cgcttgtatg tatacactaa
      481 ttttttgatt tatggcttta atttacaata aaattagatt ttatagacgg atccaaacga
      541 ttcttgattt tttctgaata atctaacaat tcagtttcat tagcgatata acgtgtaggc
      601 catcttccat ttggattatc gtttttgaat cgaggtatga tatgaacatg tacatgacga
      661 ataatttgat tggcagacct tccattattt tgcccaatat taaatccatc tgcacatatt
      721 gcggaaacaa ctgctttaga tattattcta actaatgaat acagttctcc tacttctttg
      781 ggggacataa aaagtaaatt atcataatgt ttttttggaa taactaaagt atggcctgtt
      841 gttattggat atttatccat tattactaga aaatcattat tttcataaac aattgctcct
      901 tcaatagctc cgttaataat tgaacagaat atacaagaat tattattact gtcgtaattc
      961 ataataattt tctatcaata aagatattgt tatttatttc ttggtattta taatctttta
     1021 aggtgttgat agttgatctt gttatagcca attttaaata tcactatttc atcctatctg
     1081 ttaaattatg gtagaaacta tagatattga taattttaat atatatttgt catttaaatg
     1141 tcctaaatgt gaatatcaga atgatgaaat atcgggggca gatttgacga atggaagtgc
     1201 tgaatgcggt atgtgtgaaa ctatattcaa gatagaagga cttgatacaa tcaagataac
     1261 agcttttatt gaataaagaa atatttttag caattttgaa ataatcgata atatttatta
     1321 agaaaacgaa gaatataaaa ataaactatc gaattcttac tttaatgaaa ttacctagta
     1381 gaaaaacttt ggatggacct tcaagatctc ctcatagggc gatgtacaaa gcaatgggat
     1441 taaaagatga tgacttaaat aaacccctca ttggtgtctc ttctacttct aacgaagcaa
     1501 caccttgtaa tattcattta ggtaaactcg ctcaattttc aaaaaaaggc gtatcagact
     1561 gtaattgtac tccaagggaa ttcacagcta tcgctgtttc agacggaatc gctatgggtc
     1621 atgaaggaat gaaggcttct ttagttagta gagaaataat tgcagattca atcgaagtaa
     1681 tgatgagagc tcatcaatat gacggtttgg ttggaatttc tggatgtgat aagagtcttc
     1741 ctggaacctt gatgggaatg gctcggttaa acttgccatc catttttgtt tatggaggaa
     1801 caataatgcc aggaagctgg aataacagag atgttactat acaggatgtt tatgaagctg
     1861 taggttcatt cgaagctgga aatatcaatt tagaagagtt attgcaattg gagaatgttg
     1921 catgtccgtc agcgggttca tgtggaggaa tgtatacagc aaatacaatg gcatcaataa
     1981 gtgaggcgtt aggaatgtca ttaccaggaa gtgcttcacc tccagcagaa agcgaaagaa
     2041 gaaatgaaat atgttatgaa accggaaaga aaatctatga tctcgtggaa aataatattt
     2101 gtcctaaaga catcttaact tttgaggctt ttgaaaatgc aatagcaata acaaatgctt
     2161 tgggaggatc cacaaatgct gtacttcatt tgctagcaat agccaaggaa ataggagtca
     2221 aacttacact taaggatttt gaaagagttc gaaaacgtac tcctcatata gtcaatatga
     2281 gaccaggagg gatatatgtt atgttggatt tggataaaat tggtggaatt ccaatcatac
     2341 taaagagttt attaaaaaag ggtctaatac atggtgaagc actaaccgtt actggtaaga
     2401 atatgaagaa gaatttggaa tcatttacaa taaatgtgtc tattgatgaa aatgttttaa
     2461 catcttttga tagacctttg catagtgagg gaactcttaa aattatgaaa ggttctctag
     2521 ctccagatgg tgctgtggta aagattgctg gtgtcaattc tacagaattt attggtagag
     2581 ccaaagtttt tgaaagtgag gaagaagcat tcagggaaat ttcaaggaaa aaaattgttg
     2641 aaggagacgt tgtgattatt cggtatgaag gtcctagagg gggacctggt atgagagaga
     2701 tgctatctgt aacagcagca ttagtaggac agggactagg tgaaaaaatt gctatggtta
     2761 ctgatggaag gttttctgga gcaactagag gatttatgat aggacatgta tcaccagagg
     2821 ccatgttagg tggtccaata gcactagtaa agaacggaga tagcatacga atagatatta
     2881 aaaaaggaaa aatagattta gatttatcta aaacagaact tgggcgaaga gagaagaaat
     2941 ggaaaccact aaaaccacac tataaaactg gagcccttgc aaaatatgca tcgttggtta
     3001 gttcagcttc tgaaggtgca attactagac caataataga atctaaaaat cagcgatgaa
     3061 attctattct cattttattt atttttaatc aaatattgcg aggtaataat taattaattt
     3121 accaggtcaa aaaaaaagaa gaataaaatt ttatggtctt gggaacggta gtatgagatc
     3181 tcctggtatg aattcagctt tgtcttgctc gttaaaattg agattgacac atacatttac
     3241 cagattcttc tcgaagttta tattcctaga ccaaccgtaa agaaagcaat tgtgtctgca
     3301 aacaatcact atgctggttt tggtcctatg actgctagaa tgttgagatg ataaatctca
     3361 aagaggagag aagataatat catttcctat tataaattat aaacattctt ttgataatat
     3421 tgaaaatgaa aattattctg aatttgacaa tttaaattat aaaaaaccaa gacaatcatc
     3481 aattcacatt ttttaaatag cataataata agtaataaag gattaaaagt tgaattttat
     3541 atgatattat taatagaaga ttagactttt aggagtatag taaaaaccat aatcattata
     3601 gaaattctat aacaaagtct caagtataca aaattgtata aatatggctt ttaaaatatt
     3661 catgtttcaa caaaccaaga ataataaaat atataatttt aattatgcaa taaattctaa
     3721 attaaaatga taaccccaga agaatttcaa tattgggcta ataaaattaa aactcgatct
     3781 caagaaagaa ttaatgattc tgatgaaaac cggataagat taacaacaaa tcctagaatc
     3841 tatccatggt ttgaatttat cgtggattca agagatacag aagcaattga ttcaataatt
     3901 tatatgatta aagaaaattt aaacagtatt cctgaggaat ttagatctga atttcaacag
     3961 gtgttgttag atgcattaga tagaaggaaa aatagaaaaa atactggtta tttctactga
     4021 aatataaaat tgataagaat tatttgaata ctattccaaa ttacttttta gttatcttct
     4081 agaaattctt gaatcctgat gctgccattt ctgtactgtg agagaacttt gttcattgct
     4141 tttgttatct tcttcattgg tgctacatga tgacatgttg tagtcctcag cttttgtaac
     4201 atctgctggg tcttttgttt gctatatctc aattgtaaga tcactagcca aatgaaaata
     4261 ttaattcatt atatgcttaa tgaaactcta ttttccataa atgtttttca gaagatggtt
     4321 gtaataatag tttctcctca taacaaaatc cacagctatc taacagatcc tcaaaatcaa
     4381 aacgttcact taaatacaat ctacgttctt ctttgtaata atcttttaga gctctagtaa
     4441 ttttatctga ctgttcagga gtagaataca cataccataa attatgagct gtacgcaaat
     4501 tcgataaatg attgtttttg gctaatttta aaccctcttc atagaattta ttcatcaatt
     4561 ctccatttac gtcaatccat gatgggcttc tccatgacgc cagttttttg aaaccaaatt
     4621 cttcgtattc acatccccca ttaactccac attgtcctcc agcatcaaat gtagtaatta
     4681 tacattttgt taaccttgtt atatgtctac gaaaatcaat tcccggttgc atccatccca
     4741 caaatactat atcaaaatag ttcttcctat agtttaaaac ttctattgga taagaatgaa
     4801 cgtaatccgg ctttggtcta tttaatatat aatacaacgc tgcattttgt tctattccga
     4861 cagcttttgg cagatatttt tttatttttg taaggaaatc accgtttcca catcccacat
     4921 caacgaagga aggatcttgg gaaagagact tcgcaataga aactattctt aaaatatcta
     4981 tctttctata acaaaagtaa gttcctgaaa ataacggaaa aataaatctt tcgtggtgta
     5041 gaggtggatt ttgtaattta tattgcttat aatatgaata agctttttga atttcatcca
     5101 gtgaaaaaga cattattgaa tgataatgta gataacatat ttttatataa attacgtgta
     5161 aaaccgtcat ctcatactag tatgttaaat ttatcattat aattcatttt ataacaccgt
     5221 taaaatatcc caaaaggctt attaatctat agtattaatt cataacatgg gtagaagttt
     5281 tgatgactgg tggactactg ttccagcaga tttaaaagaa aaagcacgta gaggagacga
     5341 aaataataaa ccacttttga accaagttaa ttatgtactt cttcatttgc acttggcagg
     5401 aaaacatgat gtaaaaccat cacatgaaga attaaaagat tggttgcaca gtggtcaagt
     5461 tgacgttctt agaacaaata aataataatc taaaaatttt taatttttag tttctttcta
     5521 ttctatttta taaaatttat attttaataa ttatagattt ataattcaaa gcataaatag
     5581 tttaattata acactgtttt gatatcgaca tagggtttaa atagtttcac cagtatcggt
     5641 cccttagtga aatattgaat gacaattgca atacttccag atattgatga acaaagatgt
     5701 attggatgtg cactttgtgt agaaatttgt actgctcttg gtccagatgt tcttagagta
     5761 aaaccagtag aaggctggaa gagaggtaaa gcctttgtat tttatccaga aagatgcatt
     5821 tctgatggtg cctgtgtagg agtatgtcca acacatgcaa tattctggat gagaccaatg
     5881 gaatacacac caggacaacc agttccatta cacaagaacg gtgtatttga caagggctgg
     5941 gaagaaggtt aagaaaagag tagtctgata caacaataaa aaatcatttt attttttctt
     6001 attttattat tttatattta tgaaataata ttttagataa tgtacttatt ttaaatgact
     6061 agaataggaa ttaccgggaa tccgggagta ggaaaacata ctgtaagcaa gttattatca
     6121 aaaaataaag gcttgtcgat tatcgacatt aataaaataa taatttcaaa tcatgctttt
     6181 gttacaaaaa attcaaaaat ggaaataaat atgaaaaaag caagagaact ggtcaaagat
     6241 caagtaaaaa atgaaaatat agtaatcgtt ggtcaccttc taccatatct aataagaaaa
     6301 gaagaacttg attttgttat aattcttagg agatcgcctt attctttgat tgaggaatac
     6361 aaaagaagaa attattctat tgaaaaaatc caagaaaat
//
LOCUS       DATIAS010000379         3022 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_341234, whole genome shotgun sequence.
ACCESSION   DATIAS010000379 DATIAS010000000
VERSION     DATIAS010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341234"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VLA74_07700"
     CDS             complement(<1..325)
                     /locus_tag="VLA74_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50627.1"
                     /translation="MDENSTGSNNMDRKSANPLTEQFGDFLLRINTILKRELDLYSWS
                     EFYSPLKYACEGGKRIRPLILVLSSEIIGSKNSQSNSNQVTIGDRRLDNNITTRYSDT
                     IESKID"
     gene            complement(431..522)
                     /locus_tag="VLA74_07705"
     tRNA            complement(join(431..491,508..522))
                     /locus_tag="VLA74_07705"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(468..470),aa:Glu,seq:ttc)
     gene            640..1398
                     /locus_tag="VLA74_07710"
     CDS             640..1398
                     /locus_tag="VLA74_07710"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSF50628.1"
                     /translation="MKTHDNNLPFPNNLMFVIEEIDYEIEHRSLLKHPFYTMWTEGKL
                     TVDHLRGYSKEYFQLVKAVPKFVENIYYNASTQLSVDDVNLDQETNDYRTKYLANIKQ
                     VQIEESEHIEPWINFALSLGFTRNEIIEYDGTKKVNQAINKLEKLSSISVLSGAAVMY
                     SFEKEIPKISSIKIDGLEKFYGINSDVAVNYFKIHQTADIKHAKLWETIMTNSNIHTL
                     NDGLENDGIINTAMQSLQLQNLILDSVYEKYVCS"
     gene            1519..1592
                     /locus_tag="VLA74_07715"
     tRNA            1519..1592
                     /locus_tag="VLA74_07715"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1553..1555,aa:Ile,seq:cat)
     gene            complement(1939..2304)
                     /locus_tag="VLA74_07720"
     CDS             complement(1939..2304)
                     /locus_tag="VLA74_07720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50629.1"
                     /translation="MKFTKILERVSNRRTQNKDKIFTAFIREKSIPGKRYTCIDARKN
                     LLLIIDPQNTLKETNSIFSAYDIVIPTNLVFQDLLINNSKTNRKSMLGEKVESQKLDL
                     STSTGSMFYKIKWIHITSI"
     gene            2547..>3022
                     /locus_tag="VLA74_07725"
     CDS             2547..>3022
                     /locus_tag="VLA74_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50630.1"
                     /translation="MSSQKDNIKETTNKIKESSDKYIEQQNQQIKDTAANISETTENI
                     TERVNRFQEDNRKIFEKNVDTFKKYQEQISKTSQEISNNSVELQKNIINTYQSSYVQF
                     LDNISKSYWQNFKIPERYSETYNSLNKNIQDGTVNATNFINEVIVGSVENFNKTLEL"
BASE COUNT         1104 a          474 c          477 g          967 t
ORIGIN      
        1 cgtctatttt tgactcaata gtatctgaat atcttgtcgt gatattattg tccaatcttc
       61 tatctccgat ggtcacttgg ttactgtttg attgagaatt ctttgatcca attatttcag
      121 aagataatac caatataagc ggacgtatcc gctttcctcc ctcacaagca tattttaaag
      181 gagaataaaa ctccgaccat gaatatagat ctagttctct ttttaaaata gtgttaattc
      241 ttaaaagaaa atcaccgaac tgttccgtca atggattcgc tgactttcgg tccatgttgt
      301 tactaccagt agaattctca tccaagtacg ataacttagg tctagattta aaattattag
      361 catattaatg ctactatgga attgaatctg gaaagctcga aatatgagaa tatggtttaa
      421 tcgaaaatct tgctccggcc gggatttgaa cccgggatct gcgactcgaa aggccacaat
      481 gcttgaccgg actatgcagc atagctacta caccaccgga gcatgcaaaa ctttcttgtt
      541 tggattctaa taaaatcttt tcttaatagg taaaaccttc ttttaataaa aaataaaatt
      601 caaaaggttt ttctattctc tattggatta aatcaatata tgaaaaccca cgataataac
      661 ttgccatttc caaataattt aatgtttgtt attgaagaga ttgactatga aattgaacat
      721 agaagtttac ttaaacatcc tttttataca atgtggacag aaggaaaatt gactgttgat
      781 catctaagag ggtattcaaa agaatatttc cagctcgtaa aagcagtacc caaattcgta
      841 gaaaatattt attacaatgc gtccacgcaa ttgtcagttg atgatgttaa tttagatcag
      901 gaaaccaatg actataggac caagtacttg gcaaatatta aacaggtgca aattgaagaa
      961 tctgaacata ttgaaccgtg gatcaacttt gctctttcat tgggattcac tagaaatgaa
     1021 ataattgaat atgacggaac aaaaaaggtt aatcaagcaa taaataagtt agaaaaatta
     1081 tcctctattt ctgttctgag tggagctgct gtaatgtatt cctttgaaaa agaaattcca
     1141 aaaataagtt ctatcaaaat agatggcttg gagaagttct atggaatcaa tagcgatgtg
     1201 gctgtcaact acttcaagat tcatcagact gcagatataa aacacgcaaa gctctgggaa
     1261 actattatga ctaattcaaa tatacatact ctaaatgatg gactagaaaa cgatggcata
     1321 attaatacag caatgcaatc attgcaattg caaaatctta ttctcgattc tgtatatgaa
     1381 aaatatgtgt gtagttaaag attatctttt tattgtttag gataaatatt atctgcagaa
     1441 aaaagataaa aataacttag ataaacttaa aatttttata tccaatgaat tttgatacta
     1501 ttaaagtata aaaaatttgg gcctatagct tagcctggca gagcgaccgg ctcataaccg
     1561 gtaggtcaag ggttcaaacc cctttaggcc catgaaaatt taaatacgca ggctgtttat
     1621 aagcaaggac aattattcaa attgtgtcaa acgagaattt cagtttcaac aaaaaatacc
     1681 atctactaga gttaacgtta tgataaggcg ctatcatgtc gcaagagaac cctttttagg
     1741 tgtaatgcat cagaaacaaa aagacaacgg ttagcaagat tctcggtatt tctagactat
     1801 gtgaaacatg aatgtccatc tattgaataa aaagtagtaa gaatatatat cataatccaa
     1861 atcaaaaaaa gatggaacta tgcgacttca agaccggtac catatctttg attttagttt
     1921 tttctaagta aatttctatc atatgctagt aatatgtatc catttaattt tgtagaacat
     1981 agatccagtt gaagtagata gatccagttt ttgggattcc actttctccc ctaacattga
     2041 ttttctattg gttttgctgt tgttaattag taaatcttga aatactaaat ttgtaggaat
     2101 aacaatgtca tatgcagaaa atatactgtt tgtctctttg agtgtgtttt gaggatcaat
     2161 tattagaagc aagttttttc gtgcatcaat acacgtgtat ctctttcctg ggatagactt
     2221 ttcccgaata aatgctgtaa aaattttgtc tttgttctga gttcgacgat tagacacacg
     2281 ctcaaggatt tttgtaaatt tcattaatta tctttttata tttgaattta attgtatttt
     2341 gtcataacat ttgttatgtt ttcttgttct gcaggaataa gaggtttttt attatactgg
     2401 cgaaactgtg ccccacaggt ttatttatga ataacaattg ctaatcaact tccctatgag
     2461 actaaattta tttactatat aataaagtgg ataatctata gtcaatagta taaatgttaa
     2521 tatcgtttaa ggtctgatat tattatatgt cttctcaaaa agataatata aaggaaacta
     2581 ccaacaaaat taaagaatca tcggacaaat acatcgaaca acaaaaccaa caaatcaagg
     2641 atacagcagc taacatatca gaaacaacag aaaacattac tgaaagagta aatagatttc
     2701 aagaagataa tagaaaaatc tttgaaaaga atgtagatac cttcaagaaa tatcaagaac
     2761 aaatcagcaa aacttcacag gaaatatcaa ataactccgt agaattacaa aaaaatatca
     2821 ttaatacata tcaatcatct tacgttcaat tcttggacaa tatctcgaag tcatactggc
     2881 aaaatttcaa gattccagaa agatactctg aaacatataa ttcattaaac aaaaatatac
     2941 aggatggtac agtcaacgca acaaatttca taaacgaggt catagtaggc agtgtggaaa
     3001 atttcaataa aacattagaa ct
//
LOCUS       DATIAS010000380         5434 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1976710, whole genome shotgun sequence.
ACCESSION   DATIAS010000380 DATIAS010000000
VERSION     DATIAS010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5434
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1976710"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            366..1181
                     /locus_tag="VLA74_07730"
     CDS             366..1181
                     /locus_tag="VLA74_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF50631.1"
                     /translation="MIDRDIATMKVDDYSIRYIDTGKNNSNPKISTLLLLHGLGGSLD
                     RWSEVIPFLSKYYRLLVPDIIGFGYSDKPHAEYNMDFFINFIQRFLQIMNINNLHIIG
                     SSFGGLLALEYTIRFPKDINKLVLISPAGMMNHITPALNQYISAALYPTFYNVATAYY
                     EMMYDPRMITENSIEDFIKRMNLSNSKFAFMSTLISLKNNPQLTDRLNINTPTLIIWG
                     RNDKLMPLRYAKKFKIPNSRLVIFDQCGHYPHVEKVEEFNRTVSRFLNGRDLK"
     gene            1249..1521
                     /locus_tag="VLA74_07735"
     CDS             1249..1521
                     /locus_tag="VLA74_07735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50632.1"
                     /translation="MTDKGLNNRLERKRKLENELTGKISKDWNEFVKKSDEYMKEIQE
                     NNRQYYQQQLDKELDDMERDINSGNTIGAIYHRVAADNYLRLLNLL"
     gene            complement(2072..3478)
                     /locus_tag="VLA74_07740"
     CDS             complement(2072..3478)
                     /locus_tag="VLA74_07740"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSF50633.1"
                     /translation="MTTTFDKLGIGAPIIQALKENGFESPFPIQQAAIPFLLKGVDVV
                     GQAHTGTGKTAAFSLPILSKIKNKGPIQALILVPTRELAMQVTTEINKFAKYTGIRTV
                     SIYGGQSINLQFDHLRRGVQILVATPGRLIDHIKRGTINLEEVKYVVLDEADRMLDMG
                     FIKDIKFILFYVNEDRQTCLFSATMPPEILRLAEDYMKDYEEIRLNKEEISLETITQS
                     YLVVRENEKFKHLCNFIEERTSDQQTIIFVSTKQRTQKILDDLKDSGIKAITIHGDLS
                     QRQRDDAIYRFRKGKEDVLVATDIVSRGIDVPAVGHIINYDVPEDPTVYFHRIGRTAR
                     AGGTGTAISLVSSDRVDDFGRILRKTELPIRRLNEEMGLEVPVSQQRSFRGYNNSYRS
                     GYGNSRGNRRFGNSTRYGHNNSRYSQTEGRYSRDHNFKRYGYNEDHDRSHDKHGIHND
                     DKQEKHGNGGRRGYYSSR"
     gene            3801..4532
                     /locus_tag="VLA74_07745"
     CDS             3801..4532
                     /locus_tag="VLA74_07745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50634.1"
                     /translation="MTLGYYFDLIVCLSSLLLLSSHLSFEHDMVHAQNINSKISDYEF
                     HSYIERMIAHLNASIENKQNNNNMLAIAHALHPIEEILETINERLNQTNSTLSNELSN
                     GLKSFATSIGSNSLNETINEKTKLTKILEKSLEQSIPAEKMTNSGYILNVTAELINSA
                     EDEYTESIFEGKIVNLLEYQDAQQFFKRAVILLENFDTLNENEEEILAKIKQLQNDVD
                     AKRDSSYVNSDVRDLVCEIKGSFYC"
     gene            complement(4698..>5434)
                     /locus_tag="VLA74_07750"
     CDS             complement(4698..>5434)
                     /locus_tag="VLA74_07750"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSF50635.1"
                     /translation="RRSDVQKFDSNGNYLLSWGAPKDPNLFSHKMEDVNIDKDGNVWV
                     VDWGIGKMYKFDPNGKLLMSFGKRGDGEGQFNRSWGIAFDSDNNIYTSEKYAFRIQKF
                     DPNGKFIKQWGTFGEGNSQFRHLHAISIDSKDNVYVDDEDNGNVQKFTKDGKFITSWG
                     SVGKAEGQLDEPHGIDFDSKGNVYVVDTQNHRVQVFTPDGEYIRSIGVKGAGLGEFLL
                     IHDIDIDKNDIMYILDSRDAHPNKIN"
BASE COUNT         1834 a          883 c          813 g         1904 t
ORIGIN      
        1 ttgctgtaga ctgacctggt tcattcccgg ctttgcgatt ttcatctttt tcattcgaat
       61 tagtcataat agttcaatat tattaactaa taacaaaata tatatacgtt tagtaattag
      121 ataagaaaaa atcaagctaa atgtttattt ttacttacca aatttatgtt aattagtttg
      181 aaaatattac atgttataga cattttagta atttaatcag tcggttatta taagattata
      241 tcaaatattt gaaaaaccaa gataacaatt tgccaaaatt aattaagatg tagaaaattt
      301 cgatatttag taatatatta ttcatatgga taaaatattg gatgttctga tatcagttgt
      361 ataatttgat tgaccgcgat attgctacaa tgaaagttga tgattactca attagatata
      421 tagacaccgg taaaaataat agcaacccaa aaatctcaac actccttctc ctccatggcc
      481 tgggaggatc attagaccgc tggtcagaag taataccatt tttatctaaa tactaccgac
      541 tattagtacc agatataatt ggttttgggt acagtgataa acctcatgca gaatacaata
      601 tggatttttt tataaatttt attcaaagat ttcttcaaat tatgaatatc aataatttac
      661 atattattgg ttcctcgttt gggggacttt tagcgttaga atatactatt agatttccca
      721 aagatataaa caaactggtt ttaatatctc cagctggaat gatgaatcat ataacaccag
      781 ccttgaacca atatatttcg gctgcgctct atcccacgtt ctataatgtg gcaacggcat
      841 attatgagat gatgtatgat ccgcgtatga ttacagaaaa ttcaatcgaa gattttatta
      901 agaggatgaa tttgagtaat tcaaagtttg ctttcatgtc tactttaata tcacttaaaa
      961 ataatcccca gctcactgat agactaaata ttaatacacc tacattgata atttggggaa
     1021 gaaatgataa actaatgcct ttaagatatg caaaaaaatt taaaattccg aattcgagac
     1081 ttgtaatatt tgatcagtgt ggtcattatc ctcatgtaga gaaagtagag gaatttaata
     1141 gaaccgtatc aagatttcta aatggcagag atttgaaata gactaaaata taatactaat
     1201 tttataaaaa tagataactt tatcacaaag aaataaaaat attactacat gactgacaag
     1261 gggttaaata ataggttaga aagaaaacga aagttagaaa atgaattaac gggtaagatt
     1321 tcaaaagatt ggaatgaatt tgtaaaaaaa tctgatgaat atatgaaaga gatacaagag
     1381 aacaatagac aatattatca acaacaactt gataaagaat tagatgacat ggaaagggat
     1441 attaattctg gaaatacaat tggagcaatt tatcacagag tcgctgcaga caactatttg
     1501 agattgctta atttgttata aatcacgtgc gcggattctt ttttgattgt ccacataatt
     1561 tttccatatt aatattagat ttgaaaaata tattaaacag cagaaaggtt aaatttatta
     1621 tttattttgc atttctatct gatattaaca gtatacaaac acgagaataa acctacttta
     1681 ttgcataatt aggctttttg atttgatatc tagtttgttc ggttccgatc tttttggacc
     1741 tgagcataaa ggattttgga tgttttctcc aatgaaagac tattctgaat attttagaat
     1801 atagatttag tatttttaat ttttaatctt tagggatgtt aatttgaatt actttcacaa
     1861 tcaaggtcaa cataactccc atatgcgaat gaattgaaac tttagctcta ttgatattga
     1921 attagaatat ttcataatcc agaatactag acaaattatc ttaaaaaaag ctatcttagc
     1981 aggtagaatt tgagatgaaa gaagaatatt attaagcttt cctttaattt tcaataaaaa
     2041 attagaggaa tactagttca tcacatagaa tttaacggga agaatagtag ccacgtcttc
     2101 cgccgttacc atgtttttcc tgtttatcgt cattatgaat gccatgttta tcatgagatc
     2161 gatcatgatc ttcattatat ccatatctct taaaattatg gtcacgtgaa tatcgacctt
     2221 ccgtttggct atatctacta ttattatgac catatctagt ggaatttccg aatctcctat
     2281 ttcctctact gtttccataa ccagatctgt agctgttatt atatccacgg aatgaacgtt
     2341 gttgacttac tggaacttct aggcccatct cttcgttgag tcttctaatt ggcaattcag
     2401 tctttctaag tatacgccca aaatcatcta ccctatctga tgagacaaga gatatagcag
     2461 taccagttcc acctgctctt gcagttcttc caattctatg gaaatacacc gttggatctt
     2521 ctggcacatc atagtttatt atatgaccaa ctgcagggac atctatccct cttgatacaa
     2581 tgtcagtagc aaccagaaca tcctcttttc ctttcctaaa cctatagatt gcatcatctc
     2641 gctgtctttg agataaatca ccgtgaatag taattgcctt aatcccagag tcttttagat
     2701 catctaaaat tttctgtgtt ctttgttttg tagagacaaa aataattgtt tgttgatcac
     2761 tagtcctttc ttcgataaaa ttgcataaat gtttgaattt ttcattttcc ctgactacta
     2821 aatatgactg agttatggtc tctagactta tttcttcttt gttaagtcga atctcttcat
     2881 aatccttcat atagtcttca gcaagtctta atatttccgg aggcatagtc gcagagaaca
     2941 aacaggtttg cctatcttca ttaacataga agagaataaa tttaatatct tttataaatc
     3001 ccatatcaag cattctatct gcttcatcta ggacgacata ttttacttct tctagattta
     3061 ttgtacctcg ttttatatga tctatcaatc tgccaggagt cgcaactaat atctgaactc
     3121 ctcttcttaa atgatcaaac tgtagattaa tactctgtcc accataaata gagacagttc
     3181 taattccagt atattttgca aatttgttga tctcggttgt aacttgcatt gctaattccc
     3241 ttgtagggac aagtatcagt gcctgtattg gacccttgtt ctttatcttg ctcaatattg
     3301 gcaatgaaaa agctgcggtt ttacctgttc ctgtatgtgc ctgaccaact acatcaactc
     3361 cctttaacaa aaatggaatg gctgcttgtt ggataggaaa cggtgattcg aatccgtttt
     3421 cttttagtgc ttgaataata ggtgcaccta tacctaattt atcaaatgtt gttgtcattg
     3481 tatttcactt gtttattttt ttacaaaggg cacggaaaat gtgagaagta ttttatttaa
     3541 cttaacagat ctgccgtaat tcctttctaa tattttttca taatgacaaa catataatgt
     3601 atgcgattga gagcaggata tttcatgaaa tttcatgtta ttatactcac ctagtgacat
     3661 cctttcagtt tttttaactt ctcatatgaa aagggaatac aataaaattt agtatagata
     3721 ataaaaatac caatcactat aatacttgat ttttaaaaaa atataggata aatatactag
     3781 aagttatatc actaatggat atgacgttag gttattattt tgatttaata gtgtgtctat
     3841 cttcattatt attactaagt tctcatctat cttttgaaca tgacatggtt catgcacaaa
     3901 atattaatag taagatcagc gactatgagt ttcactccta tatcgaacga atgatagcac
     3961 atctgaacgc atcaatagaa aacaaacaga ataacaataa catgcttgca attgcacatg
     4021 cattacatcc cattgaagaa attcttgaaa cgatcaatga aagattaaat caaacgaatt
     4081 ccacattaag taatgaattg tctaatggat tgaaaagttt tgcaacatct attggttcaa
     4141 attcgcttaa tgaaaccatc aatgaaaaaa caaagttaac aaaaatatta gaaaaatcac
     4201 ttgagcaatc aatacctgct gaaaaaatga caaatagtgg atatatttta aatgttaccg
     4261 ctgaactaat taattctgca gaggatgaat atacagaatc tatctttgaa ggaaaaattg
     4321 ttaatttatt agagtatcaa gatgcacaac agtttttcaa aagggctgta atattattgg
     4381 aaaatttcga tactttaaat gaaaatgaag aagaaatcct agctaagata aaacaattac
     4441 aaaatgatgt tgacgctaaa agagattcaa gttatgttaa tagcgacgta agagatttag
     4501 tatgtgaaat aaagggaagt ttctattgtt aattggcgtt cgaatgataa taatcatttt
     4561 taattgatgt tgttttattt tgaaaataga aacactgttt tacaatattg cacgatcttg
     4621 cctcaattcc atgatgtcaa aaaataattt agagaactga ttttatttct taactgaaat
     4681 ttatataaag tcaaagatca gtttatctta tttggatgtg catctctact atccaatata
     4741 tacattatat catttttatc tatatcgata tcatgtatta agagaaattc tcctagacca
     4801 gcacccttca cgcctatact tcgaatatat tctccatcag gagtgaagac ttgtacacgg
     4861 tgattttgtg tgtctactac atatacattt cctttggagt caaaatcgat tccatgtggt
     4921 tcgtcaagct gaccttccgc ctttccgaca gaaccccaac tggttataaa tttaccatct
     4981 ttggtaaatt tttgcacatt accattgtct tcgtcatcta catacacatt atctttagaa
     5041 tcgattgata ttgcatgaag atgtctgaat tgtgaattac cttctccaaa tgtaccccat
     5101 tgcttaatga atttaccatt cgggtcgaat ttttgtattc gaaaggcata tttttcagaa
     5161 gtgtaaatat tattatcgga atcaaaggct attccccatg accgattaaa ttgcccttct
     5221 ccatctcctc tcttaccaaa actcatgaga agttttccat ttggatcgaa tttgtacatt
     5281 ttgcctatcc cccaatctac cacccaaacg tttccatctt tgtcaatatt tacgtcttcc
     5341 atcttgtgtg aaaaaaggtt gggatctttg ggtgctcccc acgagagaag atagttgcca
     5401 ttagaatcaa atttttgaac atcgcttcgt cttt
//
LOCUS       DATIAS010000381         2247 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1022448, whole genome shotgun sequence.
ACCESSION   DATIAS010000381 DATIAS010000000
VERSION     DATIAS010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1022448"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1312)
                     /locus_tag="VLA74_07755"
     CDS             complement(<1..1312)
                     /locus_tag="VLA74_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSF50636.1"
                     /translation="MPINNGQEYIESLRNRNLKVYLFGELVKEPVDHPMIRPSINAVA
                     ETYDIANDDPELASAESSLSGIRVNRFLHIAENATDLVNQNRMQRKLGQKTGTCFQRC
                     VGMDALNSLYSTTFEMDEKFHTPYHKRLKEFIKKIQQENHVIGGAMTDVKGDRSLSPS
                     QQEDPDMFVHISKRDEKGVYISGAKAHQTGCINSHWILVMPTMRLRDEDKDYAIVGAV
                     PADAEGITYIYGRQSCDTRSMEGGDLDAGNAKYSGQEAMIIFDNVFIPNEYIFMDGEY
                     EYAAMLVERFTCYHRRSYVCKTGLGDVLIGAAASISEYNGIANASHIKDKLVEMTHLN
                     ETIFGTGVASSFQSYKTKAGNYQNDDMLANVCKHNVTRFPYEISRLAQDIAGGLVVTM
                     PSEKDFRSPETGPLLEKYLKGRKGVSIENRVRVLRLIENMTLGRN"
     gene            1491..2099
                     /locus_tag="VLA74_07760"
     CDS             1491..2099
                     /locus_tag="VLA74_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HSF50637.1"
                     /translation="MKLVDSKKDQFRKLAKDHGYRSRSAFKLLQLNKSYRILNKGYCV
                     VDIGCAPGGWIQVALAEVGEKGKVIGVDLKKVEPIDNAFLIQGSIDDENIIIDSILKI
                     TNSTNVDVVLSDLSPNVSGNWELDHARQIALTKNALTLGRKIIKKGGKVVLKVFQGDM
                     LNELIEELRKDFRKVIITKPTASRQVSSELYLICIGYNKSHE"
BASE COUNT          770 a          371 c          350 g          756 t
ORIGIN      
        1 catttcttcc tagagtcata ttttcaataa gtcttaagac tcgtacccgg ttctctatag
       61 aaacaccttt tctgcctttc aaatattttt ctaaaagtgg gcctgtctca ggacttcgaa
      121 aatctttttc agaaggcatc gttacgacta atcctcctgc tatgtcttgt gctaatctac
      181 ttatttcata aggaaagcga gtaacattat gtttacaaac attagcaagc atatcatcat
      241 tctggtaatt accagcctta gttttatatg attgaaaaga ggaagcaaca ccagttccaa
      301 aaattgtctc attgagatga gtcatttcaa ccaatttatc tttaatatgt gatgcattag
      361 caataccatt atactcagaa atggaggctg ctgccccaat taatacatct cctagtcctg
      421 ttttacatac ataactcctt ctatgataac aggtaaaacg ttctacaagc atagcagcat
      481 attcatattc gccatccata aaaatatact cattaggaat aaagacatta tcaaaaatta
      541 tcattgcttc ttgacctgaa tatttagcgt tacctgcatc aagatcgccc ccttccatac
      601 ttctggtgtc gcatgactgt cttccataaa tataggtaat tccttctgca tcagcaggaa
      661 cggccccgac tatggcataa tctttatctt catcacgcaa cctcatagtt ggcattacaa
      721 gaatccaatg agaattgata caaccagttt gatgagcttt tgccccacta atatagacac
      781 ctttctcatc tctttttgaa atatgaacaa acatatctgg atcttcttgc tgtgacggag
      841 aaaggctcct atctccttta acatctgtca tagctccccc tattacgtgg ttttcttgtt
      901 gtattttctt tatgaattct tttaaccttt tatgatatgg agtatggaat ttctcatcca
      961 tttcaaaagt agttgaataa agagaattta aagcatccat gcctacacat ctttgaaaac
     1021 aagttccagt tttttgtcca agctttcgtt gcattctgtt ttggttaaca agatctgtcg
     1081 cattttcagc tatatgtaaa aatctattca ctcgtattcc agaaagagag gattctgctg
     1141 atgcaagttc tggatcatca ttagctatgt cataggtttc tgcgacagca tttattgaag
     1201 gtcgaatcat aggatgatca acaggttctt ttactaattc accaaacaag taaaccttaa
     1261 gattcctatt cctcaaactt tcaatatact cttgaccatt gttaataggc atatatatat
     1321 aataataatc gtctggatct tatttatata ttattagaga tatctgtgaa ctatcaacaa
     1381 gaataataaa aatgatagaa gagattgatg atattgataa acatgataat aatattaaaa
     1441 ttatataatt ttttattgag atattgtcaa atacttgatt gaatgaataa atgaagcttg
     1501 tagattctaa aaaagaccaa ttcagaaaat tagctaaaga tcatggatat agaagtagat
     1561 ctgcctttaa actcttgcaa ttgaataaat cttatagaat cctcaataaa gggtattgtg
     1621 ttgtcgatat tggttgtgct cctggaggat ggattcaagt tgcactagcc gaagtaggag
     1681 aaaaaggaaa ggtaatagga gtagatttaa aaaaagtaga acccatagat aatgcatttc
     1741 ttattcaggg aagtattgat gacgaaaata taataatcga ttctatttta aaaatcacaa
     1801 attcaacaaa tgttgatgtt gttttatcag acttgtcgcc aaatgtgagt ggaaattggg
     1861 aattagatca tgcaagacaa atagctttaa caaaaaatgc tctcactttg ggtcgaaaaa
     1921 taataaagaa aggtggtaaa gtagttttaa aagtcttcca aggagatatg cttaatgaat
     1981 tgattgagga attgagaaag gattttagaa aagtgataat aactaaacca actgcaagta
     2041 gacaagttag tagtgaatta tacttgattt gtattggcta taataaaagc cacgaataaa
     2101 taaataaaat tcaaagtaat tttatacaca cacagattat atattcatct tcttctaatt
     2161 attatcatta aggagattag atgatttaat ttactatcaa tagattttac tcttttaatt
     2221 tattataaat aattgaagat acttata
//
LOCUS       DATIAS010000382         2108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1566342, whole genome shotgun sequence.
ACCESSION   DATIAS010000382 DATIAS010000000
VERSION     DATIAS010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566342"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..689)
                     /locus_tag="VLA74_07765"
     CDS             complement(270..689)
                     /locus_tag="VLA74_07765"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HSF50638.1"
                     /translation="MTEQINDNLNNQNIRELFEGKNFAFLSSLMRDGSPQVTPTWVDI
                     ENGYILINTAIGRIKEKNISRDPRVALAIADQNNPYDMVTIRGKVIEQIRGDIAEEHI
                     DKLAKKYIGKDKYPRSSPGEKRVLLKIKPEKIFHMHQ"
     gene            1384..1773
                     /locus_tag="VLA74_07770"
     CDS             1384..1773
                     /locus_tag="VLA74_07770"
                     /inference="COORDINATES: protein motif:HMM:NF018893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 family protein"
                     /protein_id="HSF50639.1"
                     /translation="MNKSNAIEKKEANYVEFIIYRFPKKNEKSVLQIITKSLDFFRDE
                     GVRYDYFKLGSRENIPGFTNITKTISATPKEEVWMDLIYYRDRNHRDQFVANMSNNKE
                     CQAGYEEFTKLITPGSEIINGEFSRMT"
     gene            1859..>2108
                     /locus_tag="VLA74_07775"
     CDS             1859..>2108
                     /locus_tag="VLA74_07775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50640.1"
                     /translation="MFFIQISTDVMIFFILSGLTQIFWVIPVIKRWRNLWYYFGICGT
                     TILIIIWFIAVPGSGHQVSILDITIEIFQVAFIILCYII"
BASE COUNT          730 a          325 c          303 g          750 t
ORIGIN      
        1 aaaaattatc aaactgcaaa attgtgtcaa aatcaattga acccccctca gttcgtattc
       61 tccagatgat ttaaattcat ttgtgttaaa ttaaatatat attatgttac cgaatcatgt
      121 tataatcata attcgaattc tctattagag catctacgaa taactctttt aatgtctaat
      181 gtattgtatc taagaatgaa caactgattt atattattaa ttttaaatta aatataatta
      241 tcgataaggt cttatatcaa taagaatggt cattgatgca tatgaaatat cttttcaggt
      301 tttatcttta aaagcactct tttttctcca ggcgaactcc tgggatattt gtctttgcca
      361 atatactttt ttgccagttt gtctatatgt tcttcagcga tatctcctct aatttgctct
      421 attacctttc ccctgatagt aaccatatca tatgggttat tctggtcagc tatagctaat
      481 gcaaccctag gatcgcggga aatgttcttt tcttttattc tgcctattgc agtattaata
      541 agaatatagc cattttcaat atctacccaa gtaggcgtca cctgaggaga accatctctc
      601 attaacgaag acaaaaaagc aaaattctta ccctcaaaaa gttctcgaat attttgatta
      661 tttaaattat catttatttg ttcggtcata attaaatata tggtattatt tttaataagt
      721 gttctgcgaa tttgtattaa aataagttag ttaacaaatt ttaaaactcg ttccgtatcg
      781 tattggcttt ataataacat tggacatcgc atatacattc agaatatttc aatctaacaa
      841 ctataaattt tcatattaaa attcttttta tattttgtaa caaaacacgg agtacagact
      901 taggttctgt tacttcgata tgtaatatta ttaaattttt tcctttccta ttttacttct
      961 ggttctggta gaccaaatgc aacaatacct ccacccgaca gtatattgct gactggttct
     1021 gaagttatat tttctacaat ctaaaatata actaaaatag attagaaatc aaaagaagca
     1081 ttataatcaa atcaaatcaa atcaaattat atctactaca ccatacgaca ggcgaaaaat
     1141 aattgctcaa aatctcagat cataataata tctggaaacc tggataggaa agtatataga
     1201 atttgaatgt tgaaatgaaa aatgatcggt attgagtgac tatagtcttg tcaaatatgt
     1261 aactctacaa taagcaataa ctttaaaatg agactttacc tcaacaataa tattaccaag
     1321 acatatgtct tactattata gttactaaaa catttatatt atattaatat attttatgtg
     1381 tcaatgaata aatccaatgc aatagaaaag aaagaagcaa attacgttga gttcataatt
     1441 tatcgatttc caaaaaagaa tgagaaatca gtgctacaaa ttatcacgaa atcacttgat
     1501 ttctttagag atgaaggtgt acgatacgat tatttcaaac ttggtagcag agagaatatt
     1561 cctgggttca cgaatataac caaaaccatt tcggctactc ctaaggagga agtgtggatg
     1621 gaccttatat attatagaga tcgcaatcac agggatcaat ttgtggctaa tatgtcgaat
     1681 aataaagaat gtcaagcggg atacgaagaa tttacaaaac ttataactcc agggtccgag
     1741 atcattaatg gagaatttag tcgtatgact tgattaatac gcgaataata aattattatt
     1801 ttatgtcgct gctatttgta cgtttgtagc aggtgtacta catcttgcaa ttgttccaat
     1861 gtttttcata caaatatcaa cagatgttat gatatttttt attctttcag gtctcactca
     1921 aatattctgg gttatacctg tcattaaaag atggcgtaat ttatggtact attttggtat
     1981 atgtggaaca acgattctga ttatcatttg gtttatagcc gtaccaggtt ctggacatca
     2041 agtaagtata ctagatataa caatagagat cttccaggtt gctttcataa tactgtgtta
     2101 tattataa
//
LOCUS       DATIAS010000383         3387 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_477994, whole genome shotgun sequence.
ACCESSION   DATIAS010000383 DATIAS010000000
VERSION     DATIAS010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477994"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(317..1507)
                     /locus_tag="VLA74_07780"
     CDS             complement(317..1507)
                     /locus_tag="VLA74_07780"
                     /inference="COORDINATES: protein motif:HMM:NF015882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HSF50641.1"
                     /translation="MNIREDSLNLHRMLKGKIEIHNRVPVENIFEKENGLINLIYTPG
                     VAYVAKEISKDKELAYEYTSKWNNVAIICDGTRVLGLGNIGPEAAIPVMEGKSVLFKL
                     LGGINAIPLCIATQDKEEIIKFVKSVEPMFGAINIEDIESPKVLDIIERLKHEISLPV
                     FHDDQHGTAIITLSALLNALTLLEKKLTDIHVVILGAGSAGYGICKILHAAGCTDIVV
                     IDSHGSIYEGRDHMTGNPYKQEIATKTNRRKISGNLDEVLKGADVFIGVSGKAKVLTS
                     QMIKSMNSNPIIFALSNPDPEIFPDDAIKAGAKIIATGRSDFPNQINNATVFPSVLRA
                     LLDLRVKFLSEDLLVTVAQSIAGLVDKQHLKENYIIPQINDQRILPIVTQTMTDVMKQ
                     HLSK"
     gene            complement(2137..2313)
                     /locus_tag="VLA74_07785"
     CDS             complement(2137..2313)
                     /locus_tag="VLA74_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50642.1"
                     /translation="MKKIEIFSKFKSSKNGETRVVFDNNKDKHLEYFMNGSWRHSPKC
                     KDNTNKVCDKIHKQ"
     gene            2466..2786
                     /locus_tag="VLA74_07790"
     CDS             2466..2786
                     /locus_tag="VLA74_07790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50643.1"
                     /translation="MVILIPNNYPMREWHVKNMEKTVVKYLTGLPENASPYQKRLFKK
                     YGGFNKVCNRIKYDIKHGVKNEEIVLFLEKIKTDSDFSDLRKLEGYPDRINEIETKFN
                     DIHF"
     gene            2840..3058
                     /locus_tag="VLA74_07795"
     CDS             2840..3058
                     /locus_tag="VLA74_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50644.1"
                     /translation="MTCKGICLRHKALKPKNGQRYILGQKRCQICNIFIMWPIATCPC
                     CGGRLRTRPRNGKYKSMLNECIIHSRIL"
BASE COUNT         1192 a          491 c          485 g         1219 t
ORIGIN      
        1 tgggcaaaac tgattgaaaa atttatgata gaaaaaattg ataagataag gacaaatata
       61 acatataaag taaaatattt tttcatttca aacttctaac aatggagata ttaataaagt
      121 tttattttta tgaagtgttt atataaattt attgtgtaat atgttgaaca gtcaatattg
      181 aatgttgata tctagggcac gagaggtaaa ctaaatatta tatgtcttta ataaagatgt
      241 tatcgatatt gaattagaat tagatttact cttatgaagt agattttctt tgtcagataa
      301 atattgaatt gaccttctat tttgaaagat gctgtttcat gacatctgtc atagtttgag
      361 ttacgattgg tagtatcctt tgatcattaa tttgtggaat tatataattt tctttaagat
      421 gttgtttatc aactaatcct gcaattgatt gagccacagt aacaagtaga tcttcactta
      481 aaaactttac acggagatct agtaaagctc taagaacaga aggaaagaca gttgcattat
      541 taatttgatt aggaaaatct gaccttccag tggcaatgat tttagcccct gcttttattg
      601 catcatctgg aaatatttct ggatctggat tactcaaggc aaatatgatc ggatttgagt
      661 tcatagattt tatcatttgg ctagttaaaa ctttagcttt tcctgaaact ccgataaaaa
      721 cgtccgctcc ttttaacacc tcatctagat ttccactaat ttttcgacga ttagttttgg
      781 ttgctatttc ttgtttatat ggattgcccg tcatgtgatc acgtccctca taaatagatc
      841 catgactatc tattaccacg atatctgtac atcctgctgc gtgaagaatc ttacatatac
      901 cataaccagc agagccagca cctaatatta ccacatggat atctgtcaat tttttctcca
      961 ataaagtgag agcattaagt aacgcagata aggtaataat tgctgtccca tgttgatcat
     1021 cgtgaaaaac aggtaaagaa atttcatgtt ttaatcgttc tataatatcc aaaactttgg
     1081 gtgattcgat atcttcgatg ttaatcgctc caaacatcgg ttcaacagat tttacaaatt
     1141 ttattatctc ttccttatct tgtgtagcga tacataatgg gattgcattt attcctccta
     1201 ataacttaaa aaggacagat tttccttcca taactggaat tgcagcctca ggtcctatat
     1261 tgcctaaacc caacacacgt gtaccgtcac atattattgc aacattattc catttcgaag
     1321 tatattcata tgctaattcc ttatctttgc ttatttcttt cgcaacatat gcaacaccag
     1381 gagtgtatat caaattgata agaccatttt ccttttcaaa gatattttcc acaggaacac
     1441 gattatgaat ctctatttta cctttaagca ttctatgtag gtttaacgag tcttctctaa
     1501 tattcaaaca agaacaggtt atcagtatta ctattattat tttactaaaa aatgaatgat
     1561 tttgtgatag tagtctagtc gaatgataag aatatttgca agatttattg aaaattcctt
     1621 gttaacattc aaaatcttta taaaactttt actttatctt tcgatgcctc taaagattca
     1681 tcttgaaacg atcctaactt tactgaaatg aatttatgat gtagattaat cgaatcctta
     1741 tattttgcag gaattccggt ttaacttatt acaagaatca aaattactca aaacatgaat
     1801 ttctttttga taagatctag atagtcgatt tgacaaaaat aagatattac actgttttgt
     1861 tatgcattac ttagattttt agtttatagt ttagtatacg taacactttg aagctatgaa
     1921 actccttcag agataaagaa gtcgagtttt taagtaccat ttgaaaaaac tttgaggtta
     1981 tcgaagtcat aacaaacatt gaatatacac gttataatca cgtagatatg aaacaattat
     2041 agagtttttt ataacataat aaaattatat caggatctct tttgtagata taaataagaa
     2101 tagatctgga aagtaataac aaaagagtga tctatactat tgtttgtgta ttttgtcaca
     2161 taccttgttt gtattatcct tacattttgg actatgtcgc cagcttccat tcataaagta
     2221 ttcaaggtgt ttatctttgt tattatcaaa tacaactcgt gtttcaccat tttttgatga
     2281 tttgaattta ctaaaaattt ctattttttt cataatattt tattatttaa tgataataag
     2341 aacgttgaca gccaatttta ttctcttttc ctcgttgtat aaataaagat taacaataat
     2401 ttcgaatttt gtagaaattt actctaaaaa aggtcatatt atatatccct tattcataaa
     2461 gaataatggt tattttgata ccaaataatt atcccatgag agaatggcat gtaaaaaata
     2521 tggaaaaaac agttgttaaa tatttgacag gtcttccaga aaatgcttct ccatatcaga
     2581 aacgactttt caaaaaatat ggtggtttta ataaagtgtg taatcgtatt aaatacgata
     2641 taaaacatgg tgtaaaaaat gaggaaattg ttttattttt agaaaaaata aaaactgatt
     2701 cagacttttc tgatttaaga aaattagaag gttatccaga tagaataaac gagattgaga
     2761 caaagtttaa tgatatacat ttttaacatg gtgatcgaat tcaaatctga aaatttgaat
     2821 actataaacg gtttttaaaa tgacgtgtaa gggtatatgc ttgcgacaca aagcattaaa
     2881 acctaaaaat ggtcagcgtt acatattagg tcaaaaacgt tgtcagatat gcaatatttt
     2941 cattatgtgg cctattgcaa catgtccttg ttgtggagga cggttaagaa ctagaccacg
     3001 aaatggaaag tacaaatcga tgttaaatga atgtataata cacagtcgga tattgtaagt
     3061 agtagtctct ataaataata ccttatctac aatttaattt aaccaggaaa gaataaatct
     3121 gttttatccg aagacctttc aaaatcaatg attactcttt ctataatatt cttctaaata
     3181 tagtgtaata caatatgata ttatccttac aaaattttat cgaattggac aaatatgcca
     3241 catatgcaaa aagtgttatt ttcctctgcc tctatataaa atgcgatcat tggtaatata
     3301 tctacaccaa aaaaaggcag ataaatatta tataataaag aaataaaata ttattaattt
     3361 tacagtcaaa tacattatct tcacaat
//
LOCUS       DATIAS010000384         3042 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1703102, whole genome shotgun sequence.
ACCESSION   DATIAS010000384 DATIAS010000000
VERSION     DATIAS010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1703102"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2311..2967
                     /locus_tag="VLA74_07800"
     CDS             2311..2967
                     /locus_tag="VLA74_07800"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF50645.1"
                     /translation="MQSSNDDYLSELESLRRQLPLLESEGRITEVINVVKQISLIYTR
                     NGNAYNPENAVALTKLGSLYRLEGMREEAISYHLQGLDAFRVCLSKGQTNEFLITWFI
                     NSLQELALLFRDNGQIMKAETLYKEVVEVTRKIFGESTQHYISALYNLALFYRDIGEY
                     GTSEALFQQCMERGNNLVGEYHPMIAEILNSVGVLYYIKSSVIINVIIPSSKSLIKIF
                     "
BASE COUNT         1118 a          403 c          463 g         1058 t
ORIGIN      
        1 tcttttaaag aagaaaatga ctacaactga tttattgttt tggttgatta ctgtttgata
       61 tcaatatatc cagttagcag gctagtaatg tataaggata gaaagaaaag tagaaatttt
      121 aagaagaaat aagttcaact agtaccaatg ccaaatctgt gatgaggtta gggataattc
      181 tactactagt tatttatcca aagtgataat tggtaaaaat gaatctaata aaatcccgta
      241 ttgtatcgaa gcagttttgc taaagttaca gataaaactg atttaactag tcattgtcat
      301 gattgagtct aatgtttaat ggatatcatc attttctttg tgaaatggaa acaagtcctc
      361 gttgtggtta tcaattcatc tcccatgttg ttgtggaatc aagaagaaca agaaatgatt
      421 tccaaccaaa ataatattta ttctaaactt tgcaattatg ggcaggggtt agaatgctcg
      481 gttaaaatgc tatttttgta gaattcataa ctaaattcta atatttagta agaaataacc
      541 ttacttttta gttttgcaat tgcttagttg gtttcagaat attgtaaaaa ttgtcagcta
      601 aatcagattg agaagattga agaagattac ataactacaa tggtggattt tctgttcctg
      661 acaaatttta gtaacataca atttagaata gaatattcat atctttattc tgttaaatta
      721 atagagcata atcaaaattg catgtatttt atatgtatat caaaatgaaa aattggtaga
      781 atataaagga ttgtcaaggc acaaagaaat agggaaggga gactacattt atcgccgcag
      841 tcaagttact ctatgagtgc ttgcacagga atttctgtat caacaatctt gagatcattt
      901 agtgtggcaa ctgtattatt attattagtg gctagagctg ctattcaacc atttcctcca
      961 aagatttggt tttatagatt gtatattcac taatgaacat ctcaatacca aagaaacggt
     1021 tgtatgttag tttattatga tcaaataaaa aaacatccac tttcttcgaa tccaccaatg
     1081 ccaatatgat tatttgatac ataattatcg gagattactg agccttcacc tgcagaaata
     1141 agcactattc caacatctcg taattgaccg ataagtttag gatctcatcc caggattatt
     1201 tatacctaat tttatactca gtaaaataaa caaaaataat taaataaatt cttatatttt
     1261 ataataaaat agtaaaaatt atagaataat tatgtaacta tatattaaat taaggtaatt
     1321 gctcttcttc tttctttgtt tatactcaat attttcaaat aaattcattt tctttgatat
     1381 atgattaact ttttattaga ttttttgtta actataaaaa aatgatagat aaaacaaatt
     1441 atactataat tgacctctgc aatttttaat ttttagaaaa ctctatattt cacagttcaa
     1501 ggaaacagca cagcaagttc tagagaaata tcaacttgat ttaggagtaa tatacttcat
     1561 attgaaaggg tctggagaca aaggaaaatc caaacatatg agacatcaaa cacatagcaa
     1621 aactatgcaa caattatcta gacatggtca acctattgat tgaaaatagt ccatgtgaag
     1681 aagatgaata tgaagaataa tgaacttata acatgtcaaa ctcgttacta aatatgttga
     1741 aacttcaata aagttgggta taaacagagt catagtttga atttgactaa aataggtttg
     1801 aaacaattca agttgggtat aaaaaaacaa aaaaacaatt atcttctata gagatggaga
     1861 gactctaacc aagaaatcaa tgccggaggc gggattagaa tgctggcttc gaatccgatt
     1921 ttttgacgga ttcataaatt gttatagagt atcgtagaaa taaacttttt gaagttaaat
     1981 gaaaaagtat gagtgtaata atctatatcc tgataaaata aatcttgtcg tatttgtaaa
     2041 aagacgtaaa ataaaaaaaa ataaaataaa attattttta tagatttaat tctatctaaa
     2101 ggagcgttaa ataatcagaa tttaaaaatt ctttttgaat tctttaaatg atatcatctt
     2161 ctaacacatg ttataaacat attttcttcc taaatgtcaa aatgtattag atttttttat
     2221 tatgattatt tatttcttaa ttttttatat tgataagata aaataataaa aattagaata
     2281 ttttatattt ctatttcaaa gttattaatt atgcaatctt caaatgatga ttatttgtct
     2341 gaattagaat ccttgcgaag gcaacttcct ctcttagaaa gtgaaggtcg cattactgaa
     2401 gtgattaatg ttgttaagca gatttccctc atatatactc gaaatggtaa tgcatataat
     2461 cctgaaaatg cagtagcact tacaaaatta ggatctttgt atcgactaga aggaatgaga
     2521 gaagaagcaa tttcttacca tcttcagggt ttagatgcat ttagagtttg cttatctaaa
     2581 ggacagacta atgaattctt aattacctgg tttatcaata gcctacaaga acttgcatta
     2641 ctctttcgtg ataatggaca gattatgaaa gcagaaacac tttataaaga agttgtcgaa
     2701 gttacacgta aaatatttgg agagtcaact cagcactaca tatccgctct ttacaacctg
     2761 gcactttttt atagggatat tggtgaatat ggcacctctg aagcattatt ccagcagtgt
     2821 atggaacgtg gcaataattt ggttggagaa tatcatccaa tgattgcaga aattctgaat
     2881 agcgtaggag tactatatta tattaagtca agtgtcatca ttaatgtcat tataccatct
     2941 tccaaatctc ttatcaagat attctgatat tacatctttt tgttcttcta tactggtata
     3001 gaatctgttt gcacatacat ctgattttat acgttgattt ac
//
LOCUS       DATIAS010000385         3322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1566719, whole genome shotgun sequence.
ACCESSION   DATIAS010000385 DATIAS010000000
VERSION     DATIAS010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566719"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(401..1471)
                     /locus_tag="VLA74_07805"
     CDS             complement(401..1471)
                     /locus_tag="VLA74_07805"
                     /inference="COORDINATES: protein motif:HMM:NF024498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSF50646.1"
                     /translation="MNVEAQWSIPSSSDLINEQKEKFSAYENADSSIKVDYPSSWTFS
                     EISNTDVEFHPPDESSKQVVKVSTIPITSNFISMKSIVEATLKDKSNTLNNFNLEDSS
                     IIPNAKKMSSHKLVYSYTDSDNTNRIQVDFGILDTKNLYLLSFISTPEKYYSSLPAVD
                     RMISSLIQYSEKFLVSKSVPQLLKPVSENVKPLGDPNAKIALVEFADYRCPFCHKFHE
                     QSFDKIVQNFVDKGMVKFLYKDFVVNDRGAYKGSNQAALASYCAAEQNKYWEFSNEIF
                     NNFKPEPQQWITLDSLTQFATNVQIADIEKFKNCVQSGQYQNLVDENNMLARSLGVSG
                     TPGFVLLKDNELISIIPGAVPV"
     gene            1986..2321
                     /gene="cutA"
                     /locus_tag="VLA74_07810"
     CDS             1986..2321
                     /gene="cutA"
                     /locus_tag="VLA74_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HSF50647.1"
                     /translation="MRRGRNQSAVIILSTFPNKESIIQNVNEVIIEKKLCACISLVPV
                     RSFYSWNNKLEDHEEIMVLFKTTKSLATKLKLEIARIHPYDVPEIIEMKMSDVAKSYL
                     KWMIESIKS"
     gene            2449..3246
                     /locus_tag="VLA74_07815"
     CDS             2449..3246
                     /locus_tag="VLA74_07815"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HSF50648.1"
                     /translation="MNSHSYRFEIGSETDIGLVREKNEDSLFVDEDLKLFIIADGMGG
                     HSAGEIASKIAIDTISQYTVERLNSEHVQEKDLNKLLLESINLANSKILKESADNLYL
                     NGMGTTAVFAITAEQGNIHLVNLGDSRAYLIDDRVEKISKLTTDHTLVEDHFRRGLLS
                     KEETIKHPMRHILTQSLGLNEEIDPFLTRLKFPVGNYLLLCSDGLNEMMTDKEILNVI
                     RDPKIKSCQEKCKKMVEISNEKGGVDNISIILVKNLGPDSNDNSIVV"
BASE COUNT         1202 a          504 c          553 g         1063 t
ORIGIN      
        1 aagaatttaa tcgattataa gattcaagta ttaaagttta cttttgaatt ataaatacaa
       61 agaggaatta gaataaaaaa tgagatacga acagtgtatt aaagtgtcta cgtcaagctt
      121 ttaatgtaaa atgaatcaag ggtcctgaat ttcttttata ttgttatcat atattgatat
      181 tttttcgatc cataataatt taccataaaa ctgtgcataa taataactct acaaaatcaa
      241 catcaccagt aaatctatct taatacaaaa ctataatgtc aatgaatagc atcaggtata
      301 ctggccatgt acgctgcttt caaccatttc acagtaccgg aatctgtata agtagatagt
      361 ttatttcaga tttaaagcag caattgtact cgcaaaggtt tcatacgggt actgcacctg
      421 ggattatact tattaattcg ttatctttca aaagaacaaa tcctggcgtt ccagaaactc
      481 ctagacttct tgccagcatg ttattttcat ctaccagatt ttggtactgt ccactttgca
      541 cacaattttt aaatttttct atatctgcaa tctgcacatt ggttgcaaat tgtgtcagtg
      601 aatctaaagt tatccactgc tgaggttcgg gtttaaaatt attaaatatc tcgtttgaaa
      661 attcccaata tttgttctgt tcggcggcac aatacgatgc taatgcagcc tggttagacc
      721 ctttgtatgc tccacgatca tttacaacga aatccttgta tagaaatttt accatacctt
      781 tatccacgaa attttgtact attttatcga aactttgttc atgaaattta tgacagaatg
      841 gacatctgta atctgcaaat tcaactagtg ctatctttgc attaggatct ccaagaggtt
      901 tgacgttttc tgatactggt ttaagcaatt gcggtacaga tttagaaact aaaaattttt
      961 ccgagtactg tatcaaggac gagatcattc tatcaacagc aggtaaagaa ctgtagtatt
     1021 tttcaggtgt ggaaatgaat gacagcaggt acaggttctt agtatcaaga attccaaagt
     1081 ctacttgaat tctatttgta ttatctgaat cggtataaga ataaaccagt ttgtgggagg
     1141 acatcttttt ggcattaggg attattgatg aatcttccaa gttaaagtta ttcagggtgt
     1201 tgcttttgtc tttcagtgtt gcttcaacga tagacttcat tgatataaaa tttgaagtaa
     1261 taggtattgt acttacttta actacttgtt ttgaggattc atctggagga tgaaattcca
     1321 cgtcagtatt tgaaatttca gaaaaggtcc aactactggg ataatcaacc tttatactgg
     1381 aatctgcatt ctcataagct gaaaatttct ctttttgctc attgattaaa tcagatgatg
     1441 acggtatact ccattgagct tcaacattca tggttagcaa ataaagaatg cataatgctg
     1501 aggatatcaa tacaaatagc ttaaaattca ctaagtggca tcatagtata ttcttataaa
     1561 ttacattgtc ttggagatat aacgactgag ttaagagaat ttcacaacaa aaactactat
     1621 ttttataaaa agtataatat catcagttgg ataactaaaa gaaacaaaaa taaaattcta
     1681 tgaatacacg tggatagata gaatgataag atcgtagcac tcatcatatc aaaccagtac
     1741 cccaataaat taatggtttt acctgacaat gaatattatt tcctagaatc agagatcatg
     1801 attagatgga tgattgggtg gatatattta ccgggcccat tcacaatttg gagatattga
     1861 aaaggagaaa ctcgaaaatt atattttaaa acatgaaaaa tagcatattt gtgaaaaaaa
     1921 agccaatccg ctatataaag ctcttaaaaa tcttataata cagctataat atctatagca
     1981 agtacatgag gcgggggaga aaccagtcag ctgtaataat actatcaaca ttcccaaata
     2041 aggaatcaat aatccaaaat gtaaatgagg taattatcga aaaaaaattg tgtgcatgta
     2101 taagtctcgt acctgttagg tcattctatt catggaacaa caaacttgaa gatcatgaag
     2161 agattatggt gttgttcaag actactaaat ccctagccac caaattgaaa ttggaaattg
     2221 ctagaatcca tccatatgac gttcctgaaa tcattgaaat gaagatgagt gacgttgcta
     2281 aatcatatct aaaatggatg atagaatcca taaagagcta aattctatat ctttcttctt
     2341 gcttccaatc atcgatattt aatttacatt ttacagaaca aacaaaacat attctctttt
     2401 ttggtataac gttttatact ttagaaccaa agtattaaca aaaaaatctt gaattcccac
     2461 agttatcgtt ttgaaatagg atccgaaaca gacataggac tagttagaga gaaaaatgaa
     2521 gattctctat ttgtggatga agatttaaag ctttttatta ttgcagatgg aatgggtgga
     2581 catagtgctg gagaaatagc aagtaaaatt gcaatagaca caatttcaca gtatacagtt
     2641 gaaagactta acagcgagca tgtacaagaa aaagacctaa ataaactact tttagaatca
     2701 ataaatcttg caaattcgaa gatattgaag gagagtgccg ataatctcta tttgaatgga
     2761 atgggaacca cagctgtttt tgcgataaca gcagaacaag gaaatatcca tctagtaaat
     2821 cttggggata gcagggcata tcttattgat gatagagttg aaaagatttc taaattaact
     2881 acagatcata cactagttga agatcatttc agaagaggtt tattatctaa agaggagaca
     2941 ataaaacacc ccatgcgtca tatactgaca caatctctgg gattaaatga agagattgat
     3001 cctttcctaa cccgccttaa atttcctgta ggaaattatc ttttattatg ttctgatgga
     3061 ttaaatgaga tgatgacaga taaagaaatt ttaaatgtca taagagatcc taaaattaaa
     3121 agttgccaag aaaaatgcaa aaaaatggta gaaatttcaa atgagaaagg tggagtggac
     3181 aatatttcaa taatattagt gaaaaatctt ggacctgact ccaacgataa tagtattgtt
     3241 gtttgatcct tccttttaca atctatccta tcgaaggtga aaagatgaat aacaaaatat
     3301 aaaatttttt taataaatta aa
//
LOCUS       DATIAS010000386         2346 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1840768, whole genome shotgun sequence.
ACCESSION   DATIAS010000386 DATIAS010000000
VERSION     DATIAS010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840768"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..1403
                     /locus_tag="VLA74_07820"
     CDS             126..1403
                     /locus_tag="VLA74_07820"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF50649.1"
                     /translation="MTNDLVLNLPFENTNAIETNYDDNDNNKDNGSIENDLNYIVDPN
                     EYLEEDTTPYQNNNNNSSSRNAQIKQSVESKINDNNEIKSDNNNINSNEKIKDESFAQ
                     TLDATTNTDTTTNKNKNTNFNFVAVGDWDCNDEAEDTVENIIDKDPELVLALGDLSYN
                     GDAECWLELIEPIADKTKIVIGNHEVDSKDLTEDYMDYFGLKEQYYFFNYKNMHFLVL
                     STETDYEDDSEQYEFAVRDLEKYSQDPFIDWVIVLYHDHIYGSGSLEEETDFREIYHP
                     LFDKYKVDIALQGHHHVYERTYPITFNNEDDDEPIVHNNIPNIYKNPKVSSFLTTTFN
                     NDKYENAKFLEQYNNPNIYKNPKGTVFLTVGTGGADDMELSSLEDFSAEGIDGTFGIL
                     DITLEGDQKTLTGTFIENGKKKEIMDVFKIVKE"
     gene            complement(1503..2234)
                     /locus_tag="VLA74_07825"
     CDS             complement(1503..2234)
                     /locus_tag="VLA74_07825"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HSF50650.1"
                     /translation="MHRKVFTTTIIGSSFVVLLLYFGLTTGEEESYNNNILNPVEIFA
                     QEGDKLPVVKNSKIIEFSGVNYADVVNSRDINLNSFTVSVWFNTAMNVTGEVDNAFLI
                     NKGGVGTELPGFNLNYGIWLNNREQVSGGFETLNGDDYFLTSQASYADGMWHNAILTF
                     DNEQNLLNLYMDGLEVATNTTNIGITPDNTGKQPIRLGANSLAEKGKINGNYTGQLDD
                     IQIWDYAFTKEQVANLFDTESNIAR"
BASE COUNT          853 a          324 c          333 g          836 t
ORIGIN      
        1 agataatatt attatagcca ctttaaagat atatcttgtt tgttttgatg tttgtaaatg
       61 gtaataataa taatcacaaa tttcatttta tttatgtatg gagtttaata ttatttgttt
      121 tttatatgac aaatgattta gttttaaact taccttttga aaatactaat gctattgaga
      181 ctaattacga tgataatgat aataataaag ataatggaag tatagagaat gatttgaatt
      241 atatagttga tcctaatgag tatttagagg aggatactac tccttatcaa aataataata
      301 ataatagcag cagtagaaat gctcaaataa aacaatctgt cgaaagtaaa attaatgaca
      361 ataacgaaat aaaatctgat aacaataata tcaattctaa tgaaaaaata aaagatgaat
      421 cttttgccca aacattagat gctactacca ataccgatac cacgacaaat aaaaataaaa
      481 atactaattt taactttgta gctgtaggag attgggattg caatgatgag gctgaagata
      541 cagtagaaaa tattattgat aaggatcctg aactagtttt agctcttggt gatttatcat
      601 ataatggaga tgcggaatgc tggttagaat taatagaacc aatagcagat aaaaccaaaa
      661 tagtaatagg aaatcatgaa gttgattcaa aagacttaac agaagattat atggattatt
      721 ttggtttaaa agaacaatac tattttttta attataaaaa tatgcatttt ttagtattat
      781 ctactgaaac tgattatgaa gatgactcgg aacaatatga atttgctgtc agagatcttg
      841 aaaaatattc tcaagaccca tttattgatt gggtcattgt tttatatcat gatcacatat
      901 atggttctgg ttctcttgaa gaggaaacag attttagaga aatttatcat cctctttttg
      961 acaaatacaa agtagatata gctttacagg gacaccatca tgtctatgag agaacttatc
     1021 caattacttt taacaatgaa gatgatgatg agccaatagt tcataataat ataccaaata
     1081 tctataaaaa tccaaaagta tctagctttt taacaactac ttttaacaat gataaatatg
     1141 agaatgctaa attcttagaa caatataaca atccaaatat ctacaaaaat ccaaagggaa
     1201 cagttttttt aactgttgga actggtggag ctgatgatat ggaattatct tccttagaag
     1261 acttttcagc cgaaggaatt gatggtacat ttggaatact agatatcaca ctagaaggtg
     1321 atcaaaagac attgacaggt acttttattg aaaatggaaa gaaaaaagag attatggatg
     1381 tattcaagat tgtaaaggag taaaatggaa tagctagttt tagttagtta gttattattc
     1441 tacatttgga ttatttttat tgtttcaaca ttgattttta aaatttatta tgacttcttt
     1501 atctatctag ctatgtttga ttctgtatca aataagttag ctacttgttc tttagtaaaa
     1561 gcatagtccc atatttgaat atcatctaat tgtcctgtat aattaccatt tatttttcct
     1621 ttttcagcta aggagtttgc tcctaacctg ataggttgtt tccctgtatt atcaggtgtt
     1681 attcctatat tagtagtgtt agttgcaacc tctaggccat ccatgtatag atttaacaaa
     1741 ttttgctcgt tatcaaaagt tagaattgca ttatgccaca tcccatcagc ataagacgct
     1801 tgggaagtaa gaaaataatc atctccgttt aaagtctcaa agccacctga aacttgttct
     1861 ctattattta gccatattcc ataattaaga ttaaatcctg gtaattcagt tcctactcct
     1921 cctttattta ttaaaaaagc gttatctact tctccagtga cattcattgc tgtattaaac
     1981 catacagata ctgtaaaact atttagattg atatcacgac tatttacaac atctgcataa
     2041 ttaacacctg aaaactctat gatttttgaa tttttaacaa cagggagttt atcaccttct
     2101 tgagcaaata tctctactgg atttaaaata ttattattgt agctttcttc ttctcctgtt
     2161 gttaaaccaa aatataacaa taaaacaaca aaactagaac ctatgatagt agtagtaaag
     2221 acttttctat gcattttcta tttcataatt tttataactt aaatatattt attatttata
     2281 ttagatcact tgcgcagtta cattagatct acatcttatt cttcaaatct cccatccaat
     2341 tactta
//
LOCUS       DATIAS010000387         7738 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1023135, whole genome shotgun sequence.
ACCESSION   DATIAS010000387 DATIAS010000000
VERSION     DATIAS010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7738
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023135"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..558
                     /locus_tag="VLA74_07830"
     CDS             247..558
                     /locus_tag="VLA74_07830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50651.1"
                     /translation="MVQRDYGISVKLFKTDGSRLWIIGLIGLLVFAYVLIIDTDRISP
                     FVKLIFIGSFSSLYYLYDIVIHRFSIGRKDLNGVGDYPEVIRKLLGQGKDQNLKNHNQ
                     K"
     gene            complement(1425..3911)
                     /locus_tag="VLA74_07835"
     CDS             complement(1425..3911)
                     /locus_tag="VLA74_07835"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HSF50652.1"
                     /translation="MTKIIEGFIFDTMDQPILNVQVQAFQKISPLNLFWNPKLDIVLH
                     PVPEFTDNKGHFRITLSKDFSPNHLIYLCIINSEEPGLKFTSVRDQHSRYKKEMEPFI
                     DNQGFKHRRWRGEVLDNLDNTVYITVIKEKRVVPQKYDSIVIGSGFGGTISAITLAKR
                     YKDERNNQKVCILERGQWWVSHEMPARSDGTINGKPTIREFLHKNDMPYSTWPHPDDL
                     KGVFNFFGNSRTINKVKGVIDYRLLKNVHVLAASGVGGGSLVYLNVTEHPEKSVYENW
                     PTQTDGGPGLETYFDHAYRFIGVNSIPTTSSIGRFKLPRTKVFQDTIGRIDQLNHNII
                     NIDDLNARLSITEIPETDHIFENKGPLEFYAKVDSNKNVEDLTIPEKLDTFNTKYKKE
                     TNVCQRQGRCGIGCIPGARHTLNKEIHRAIDTDKLPLDVHPLCEVIDIKEIDNPQDPG
                     YKYEVKFLDYRDIVDNIDYNPTNGLNDAQKSEITKTIKTKQVILAAGSIGSTEILLKC
                     KKNGSLKLSDKLGEGFSTNGDMFGIISPTKENVDATRGPMQTSIARFGSNGTSNFSHS
                     IEDLGIPKMFAGIFSGLVEFLQGMNRIDFGGSLGNSVYKFISQVFSFDSREDNLINAL
                     INLVEGKDLSVLIKPVSTLQTIIDLIGKRDKKSPEEEVSNTLVLFGIGRDDKNRRGKL
                     ILETNTGKENITLERKFDLSQQIFTKIIDSMREISKLVAKEGEKNLIIPLWNITDANK
                     RSQIVAHPLGGCCMGNSPTDGVVDSFGRVFKVDGENAGNTETHYHGLYVVDGAIIPSS
                     LGVNPSLTITALALRIAEKEFAGKKDHLPK"
     gene            complement(4573..4956)
                     /locus_tag="VLA74_07840"
     CDS             complement(4573..4956)
                     /locus_tag="VLA74_07840"
                     /inference="COORDINATES: protein motif:HMM:NF025580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4328 domain-containing protein"
                     /protein_id="HSF50653.1"
                     /translation="MYRANKNIHIFGAKDIYSPRMSIIWFFIPIINILNGYRIAKQIW
                     TASDTFITLINGKEWKNYYHSLKIVNIWWILTVLINILLFMSSYSLGYISILIVILSI
                     ISTILYIKIIKQVAKWQDQKAAKIM"
     gene            5493..6695
                     /locus_tag="VLA74_07845"
     CDS             5493..6695
                     /locus_tag="VLA74_07845"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF50654.1"
                     /translation="MTFGQGFLKIPISNYLLLSIIISVSLCFLNNEDAYSQALNNESI
                     IDTLLEKANQFLDNYKYQEAKPYYDEVLEIEPFNSEALTNKGVLFHDLGNYSEALKYY
                     DKALIVNSSNIDALYNKGLVLDSLGNDSEALKYYDKALIVNPNSIDILSTKANTLTIL
                     GKYQEAIQYYDKVLEIDPNNIDTLNFKGVSLFDIGKYQEAIPYFDKVLEIDPNNVNAL
                     SFKGLSLNRLGDYIEALKYFDKALIVNPRNIDIWYYKGNIFTNLGNYQEATQYYDKVL
                     EIDPNNVNALYNKGLVLSNLGKYQEATQYYDKVLEIDPTDIDTLGNKGTILYYIGKYQ
                     EAIQYYDKVLDIDPNNVNALHNKGNTLATLGKYQEAIPYFDKVLEIDPNNVNALYTKQ
                     LYLDDLGK"
     gene            6900..7283
                     /locus_tag="VLA74_07850"
     CDS             6900..7283
                     /locus_tag="VLA74_07850"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50655.1"
                     /translation="MNKRKNHKHVIRTITRIPDDLWNEIKDILPDEKPENTISRPIVP
                     YRKVLDGIIFVLRTGCQWKMLPKEYGSGSTCHRRFQEWMQLDIFDRIWTRLLKIYDNR
                     IGIKWNWQSLDSISVKSPLGGDDWT"
     gene            7270..7557
                     /locus_tag="VLA74_07855"
     CDS             7270..7557
                     /locus_tag="VLA74_07855"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50656.1"
                     /translation="MTGHNPTDRSKLGTKRHILTDKEGIPLSTVITSANTHDVTVAID
                     TVDSIVIKRQSSSLSTTTNRNKKQNICLDKAYHSQEIEQKIIERIYSTHTT"
BASE COUNT         2721 a         1225 c         1132 g         2660 t
ORIGIN      
        1 gttatctaca acatcaaaat caagtaatac ttcacctctt tttactagag actcgttgta
       61 atttctccag ttcatcatat aatatgacta gaataggtta gctaaatgtg ttaggaagag
      121 gaaattacgc aacaaagtat cggaattaga aaattaccta gatgtgcttg gacaggaatt
      181 gagaaggggt tattaaaccg tgatattcac atatgtgttg attcagtttt aaatgcgaga
      241 caagacatgg tgcagagaga ctatggaatt tctgtaaaat tattcaagac tgacggctct
      301 cggttatgga ttataggttt aataggattg ttagtatttg cttatgttct aattatagac
      361 acagatcgta tttctccatt tgttaaattg atttttatag gatcattttc atcattatat
      421 tatttgtatg atattgtcat tcatagattt agtataggta gaaaagatct taacggtgta
      481 ggagattatc cagaagtaat cagaaagtta ttaggacaag gaaaggatca gaatttaaaa
      541 aatcataacc agaaatgagt atttccaatc tgaataatcg tttcatctat tatgaaggct
      601 gaaattcttt tacgtttgta gatcggatat tctgcaaacc ctgaatcaaa tctcagacag
      661 aagtataact tctcttcccc tctctaaatt ttactaatgc ctttgtattt cgtaaactca
      721 aaccaagcaa gtacaaatac aaagaataca ttacaataat agtggatgtc ctctttctct
      781 caaatgttat aaccataaca tgagaaaggg atattcacag ctaaatctat ttccttaaca
      841 gttatgtaaa gacattcata agttatttat gtaaactaat actagttatt ttgttttatt
      901 atctatgaat aaattcatta ataactaata attcaaaaca atcactttta ctttacatta
      961 taaactatca aggtaattac aaaacgctta acctaacaca gcctgttaag aattccaaga
     1021 tcaataaatt caaagtacaa tgaagaagtt ttaataaagc aacaatggaa taaagttcgt
     1081 tctaatatca atttattaac agaaaatttt gtagcgtttt tagttacaaa aaaacaaaat
     1141 gaactaacaa attatactaa gaacctctcc gaaaattctt cctatcaata tgcctattcc
     1201 tcaattgttt tcctctcacc ctgtgctatt agctctttcg aagttttgag agaaagatct
     1261 gcattttgta acatagaagg agactcgagc tcagttctga ctattcttgt gaccgatttt
     1321 atatttttac catctttcga atctagcttt gattgatcaa caaatttatc aaagacttca
     1381 taaagtcgtt ctatcagttg aattcttctt gcaacccctt tctttcattt aggtaaatga
     1441 tccttcttgc cagcaaattc cttttccgct attctaagtg ctaatgctgt gatagttagt
     1501 gaaggattta ctcctaaaga agaaggaatt attgctccgt caacaacata taacccatga
     1561 tagtgagttt cggtattgcc tgcattttcg ccatccactt tgaacactct tccaaaactg
     1621 tccactactc catctgtcgg gctatttccc atacaacagc ctccaagagg atgagcaact
     1681 atctggcttc tcttattagc atcagttata ttccacaaag gaataatcaa atttttttca
     1741 ccctccttgg caaccagttt tgatatttct ctcatgctat caattatttt tgtgaatatt
     1801 tgttgcgaca aatcaaattt ccgttctagt gtaatgtttt ctttacctgt atttgtttca
     1861 agtattaatt tcccacgtct attcttatca tcacgtccaa ttccaaaaag aacaagagta
     1921 ttagatacct cctcttctgg agatttttta tccctttttc caattaaatc aattatggtt
     1981 tgtagggtgc taacaggttt aattaataca ctcaaatcct ttccctctac aaggttaatc
     2041 aatgcattta tcagattatc ttctctggaa tcaaaactaa aaacttgaga tatgaatttg
     2101 taaaccgaat taccaagact gccgccaaaa tcaattctat tcatgccctg caaaaattcg
     2161 acaaggcctg aaaatatccc agcaaacatc tttggaattc ctaaatcctc aatagaatgt
     2221 gaaaaattac ttgtaccatt actgccaaat cttgcaatag atgtttgcat aggtcctctt
     2281 gttgcatcca cattttcttt tgttggtgaa attattccaa acatgtcacc attggtagag
     2341 aatccttccc ctaacttgtc acttaacttt agcgagccat tctttttgca ttttaagaga
     2401 atctcggtag atcctattga gccagcagca agtattactt gtttcgtctt tattgttttg
     2461 gttatctcac ttttttgggc atcatttaga ccattggttg gattgtagtc aatattatct
     2521 actatgtccc tataatcaag gaattttact tcatatttgt atccgggatc ctgtggattg
     2581 tctatttcct taatatcaat tacctcgcat aatggatgaa cgtcaagagg aagtttatcc
     2641 gtatctattg ctctatgaat ttctttgttt agagtatgtc ttgcacctgg aatacagcct
     2701 attccacacc taccctgcct ctgacaaacg tttgtttctt ttttatattt tgtattaaat
     2761 gtgtccagtt tctcaggtat cgttagatct tcaacatttt tattgctatc aactttagcg
     2821 tagaactcca acggcccttt attttcaaat atatgatctg tttctggaat ttctgttatt
     2881 gaaagtctag cattgagatc atcaatattt ataatattat gatttagttg atcaatcctg
     2941 ccaatagtat cttgaaatac ttttgttctt ggaagtttga atcttccaat gcttgaagta
     3001 gttgggattg aattaacgcc tataaatcta taggcatgat caaaatatgt ttctagtcct
     3061 ggtccaccat ctgtttgtgt tggccaattt tcataaacgg atttttcagg gtgttctgtg
     3121 acattcaaat acactagtga acctcctccc acgccactag cagcaagaac atgtacgttt
     3181 tttaatagcc tataatcaat tacaccttta accttgttaa tagttctgga atttccaaag
     3241 aaattaaata ctccctttaa atcgtcagga tgaggccagg tactatacgg catgtcattt
     3301 ttgtgcagaa attcgcgtat agttggtttt ccattaatcg ttccatcact tcgtgctggc
     3361 atttcatgac ttacccacca ttgtcctctt tctaatatgc aaactttttg attattacgt
     3421 tcatccttgt atctttttgc caaagtaatg gcacttatag taccaccaaa gccagagcct
     3481 ataacaattg aatcatactt ttgcggaact actctttttt cttttataac ggtaatgtat
     3541 acagtgttat ctaaattgtc taggacttct cctctccatc gtctatgttt aaagccttga
     3601 ttatcaataa atggttccat ttcctttttg tatctactat gctgatcccg gacagaagta
     3661 aatttcagtc caggttcttc tgaatttata atacagagat aaatcagatg gtttggtgaa
     3721 aagtcttttg ataatgtaat tctaaagtgt cctttgttat ctgtaaattc aggaacggga
     3781 tggagaacta tatctaattt aggattccag aacaaattga gaggtgaaat cttttgaaat
     3841 gcctgtactt gcacatttaa aataggttga tccatagtat caaagataaa gccctctatt
     3901 atcttggtca ttagccaatt caacttggga gaactattaa aagaattcta tcatctttta
     3961 ttatggacac gttaatgtga caggcgtatc caaacaattt acatgacagg agattttttg
     4021 ctgaaagaaa gaagtaaaag agagaggatc gtaatataac cactttatgt aatatctatc
     4081 aattctttgt gatctgcaat ttcctctatt ctaactcttc ttattataaa acccaggaag
     4141 aaatactagg caaatatcca aataaattat tatttatttc tttttaacaa ataaaatatt
     4201 caagtaaaaa aagattaaaa aaatatgatt gcatcaaagt aatatatcaa aaatcactgg
     4261 ttccacttta tagaagggtt gaaatcccac agatacaatt tggattgaca atatgttttt
     4321 tcaatctaat aaataaaata atgctaaatt tctcttattc taataatata tttttctaat
     4381 atcaaatttg tataataaaa cttttaataa ttcaactgac cccttatact atatggggcc
     4441 agtgggatgt gaaacaaatt tgacataaat tttggtccct ccaacgaaaa atacatctaa
     4501 aaaaatttta actcgatatc tatattctat tatttaatta atggctagta caaacaaaaa
     4561 gaatgttgga tgttacatga tttttgctgc tttttgatct tgccattttg ctacttgttt
     4621 tattattttt atgtaaagga ttgtagaaat aatagataaa ataacaatta aaatagaaat
     4681 gtaacctaag gaataagagc tcataaataa tagaatatta attaggactg taaggatcca
     4741 ccatatatta acgattttta gagaatgata atagtttttc cattctttac cgttaattaa
     4801 agttatgaaa gtatcgcttg ctgtccatat ttgttttgct atccggtatc cattcaatat
     4861 atttatgatt ggaataaaaa accaaattat tgacattctt ggagaatata tgtctttagc
     4921 cccaaaaata tgaatatttt tattagctct ataaatccac tacaaaaata gaatagagga
     4981 agcgatggta acaatataat atattatgtc aaagattgca taaggagtat tatctgattg
     5041 agtaatggaa tacgatgaat aataatcaac agtataggaa tcagaaacat tctctaacga
     5101 aattgaaaat atggtataaa aaatattagt taaaattact agagccaaac tacagataga
     5161 taatattata gtatattttg ttaatttatt agtgatttaa attcttgttt attgtttgtt
     5221 accaagttac ctatttaaga aatttaatca gattaataaa catatgttat gtttatagat
     5281 aatatctaaa ctcattttgg tattgaaatt tttaaatatg actacaaaac ataattttaa
     5341 cttcttcata atagtcaata aattccaaag ttgggatttt atttctgaac aattaaaaat
     5401 catgctaata gctaaattcc aaagttggga atatgtgcct ttaattagtt atttgaaaat
     5461 ttatattagt atttataaaa taagaaagac aaatgacatt cggacaaggg tttttgaaaa
     5521 ttccaatttc aaattatctc ttactatcaa ttattatttc cgtttcttta tgttttttaa
     5581 acaatgaaga tgcctattca caggcattga ataatgaaag cattattgat actctattag
     5641 aaaaagcaaa tcaatttctt gataattata aataccagga agcaaaacca tattatgatg
     5701 aggtattaga gatcgaacct ttcaatagtg aagcattaac taacaaaggt gttttatttc
     5761 atgatcttgg taactatagt gaagcactaa aatactatga caaagcatta attgtaaatt
     5821 caagtaatat tgatgcatta tataacaaag gtcttgtatt agatagtctt ggtaacgata
     5881 gtgaagcact aaaatactat gacaaagcat taattgtaaa tccaaatagt attgatatat
     5941 tatctactaa agctaataca ttaaccattc ttggtaaata ccaagaagca atacagtatt
     6001 atgacaaagt attagagatt gatccaaata atattgatac attaaatttt aaaggtgttt
     6061 ccttgtttga tattggtaaa taccaagaag caataccata ttttgacaaa gtattagaga
     6121 ttgatccaaa taatgttaat gcattatcat tcaaaggtct ttcactaaat cgtcttggtg
     6181 actatattga ggcactaaaa tactttgaca aggcattaat tgtaaatcca cgtaatattg
     6241 atatatggta ttacaaaggt aatatattta ccaatctggg taactatcaa gaagcaacac
     6301 aatattatga caaagtatta gagatagatc caaataatgt taatgcatta tataacaaag
     6361 gtcttgtatt atctaatctt ggcaaatacc aagaagcaac acaatattat gacaaagtat
     6421 tagagattga tcctactgac attgatacac taggaaacaa aggtactatc ttatactata
     6481 ttggtaaata tcaagaagca atacaatatt acgacaaagt tttagacata gatcccaata
     6541 atgttaatgc attacataac aaaggtaata cattagccac tcttggtaaa taccaagaag
     6601 caataccata ttttgacaaa gtattagaga ttgatccaaa taatgttaat gcattatata
     6661 ccaaacaact ttatttggat gatcttggta aataaaaaga aacaatagaa cttgctgaga
     6721 acattaagac tcaattagca ttaattctcc attttaagat cagtaaaata acaaaatcgt
     6781 atacgttggc cattgataaa aaagttcagt aaggattcag aattatatta ttaagagcct
     6841 atcccaaaaa tagataggaa tatagctcct cctttttatc atctttactt atattacaat
     6901 tgaacaaaag gaaaaaccat aaacatgtta ttagaacaat tacacgcatt ccagatgatc
     6961 tatggaatga aattaaagat attttgccag atgagaaacc agagaatacg ataagtcgtc
     7021 ccattgttcc atatagaaaa gttcttgatg gtataatatt tgtattgaga actggatgtc
     7081 aatggaaaat gttacctaaa gaatatggtt ctggttcaac atgccataga agatttcagg
     7141 aatggatgca attagatatt tttgatagaa tttggacaag actgttaaaa atatatgata
     7201 atagaatagg aattaagtgg aactggcaat cacttgatag tatatcagta aaatcacctt
     7261 tagggggcga tgactggaca taatcctact gatagaagca aattaggaac caaaagacat
     7321 attctaacag ataaagaagg tattcctttg tctactgtta taacatctgc aaatactcat
     7381 gatgttactg ttgcaattga tacagttgat agcattgtaa tcaaaagaca atcatcatca
     7441 ttatcaacaa caacaaatag aaataagaaa cagaacatat gccttgacaa agcataccat
     7501 tcccaagaaa tagaacaaaa aatcattgag aggatatatt ccacacatac gacatagaag
     7561 agaagaaaag aaacataaca atagatgtcc cgcaaggctc ttaatttaag cagcaaaagc
     7621 tatagctaag aacattctaa ttattatatg aaaattaggt ttgaaagaaa taagacatcc
     7681 tcaattatag taatgtattc tctgtatctg tattttcttg ggttgagttt aagaaata
//
LOCUS       DATIAS010000388         2635 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_69037, whole genome shotgun sequence.
ACCESSION   DATIAS010000388 DATIAS010000000
VERSION     DATIAS010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69037"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..1291)
                     /locus_tag="VLA74_07860"
     CDS             complement(95..1291)
                     /locus_tag="VLA74_07860"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSF50657.1"
                     /translation="MNRYLSFGIPFLFGIGFLVLDNNAISSSNLSTVIGNIFSKEALS
                     NINYYYKSNSFNLFDKNHISLDFYNIPLANAQEQNEGDNINNNKTNENNDKYVILVFD
                     RGYKTTFTKAKPILEKYGFKGTLFVACDRTESSNGLNWDELKQLQNEGYNIQSHGSTH
                     TKLINLTSYEEMEAIVREGKECLQEKGFNPTVFQAPYNKGGNDSKIVEIISKYFDFAF
                     IEHAKYMFLNCDGWENFGYGKKNYEKSTDCSPYSSDGTLKPTNRYAMKEWSHDREHDK
                     IYESRYLLINEDPHGEVVNKAVLERFIKILERQAEFNKDGEINAIPIVSYHRLDTNKD
                     FDTSPELFEQEMKYLYENGYNVITLADLGYDENQERFYIKNSNNIGSELLQFQNKSQE
                     LTSKAK"
     gene            1607..>2635
                     /locus_tag="VLA74_07865"
     CDS             1607..>2635
                     /locus_tag="VLA74_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50658.1"
                     /translation="MNNTKIMSLSLFFILTVITILTIINYNYSSNQLSALFILAEPDN
                     NNKEKGDKKEQEQTKEDKDEDKDENEDEDKNKENSNKKSNSKNSYKIDPRYRSFFPPT
                     KQIVIPEIYQSVPNGETYRFNKTNPNDKVQVDEEENKKVFTQQNYDDIWRIDGGKPRI
                     DIHTKDAGIIPDKQIIDKNMSKSIVQSWNFSELKDIGYWHKPSDWKNVEVTLIFKLLD
                     SSRSKGDQHAISIVTRSITHSQLDNDYKKSKDEAQFFCGGSSYHNNISNEGHVRMKKE
                     QYHIDYEWERYNETLTVGKVEKIYNKIIGFKGIIYNINDTAVKLETWVDVENGGKGPY
                     KKVHELIDN"
BASE COUNT         1014 a          370 c          359 g          892 t
ORIGIN      
        1 tagtaacaat atcacagcgg aaacctctgg gcccattgtg atattggttc tataattgga
       61 ttcaccctca aaaaataaaa aagaaaggtg aattttattt ggctttagat gtcagttctt
      121 gagatttatt ctgaaactgt aatagttcag atccaatgtt attactattt tttatataga
      181 atcgttcttg gttttcgtca tagccaagat cagcaagagt tataacatta taaccatttt
      241 catatagata tttcatctct tgttcaaata attcgggtga agtatcaaag tctttatttg
      301 tatctagtct atggtaggaa acaattggaa tagcatttat ctctccatct ttattaaatt
      361 ctgcctgtct ttctaatatt ttaatgaaac gttctaatac agccttgttt actacttcgc
      421 catgaggatc ttcatttatt agcagatacc tgctttcata gattttatca tgctctctat
      481 catgtgacca ttctttcatt gcatatctgt ttgtaggttt gagagttcca tcagaagaat
      541 atggactaca atcagtactt ttttcatagt ttttcttacc gtaaccaaag ttttcccatc
      601 catcacaatt tagaaacata tatttagcat gttctataaa tgcgaaatca aaatatttac
      661 taataatctc tactattttt gaatcgtttc cacctttatt atagggagct tgaaatacag
      721 taggattaaa gcctttttct tgtaaacatt cttttccttc tctaactatt gcctccattt
      781 cctcatatga tgtaagattg ataagttttg tatgagttga tccatgagat tgaatgttat
      841 atccctcatt ttgtaattgt ttcaattcgt cccaattcag gccgtttgaa ctttcagtac
      901 gatcacaggc tacaaataaa gttcctttaa aaccatattt ctccagaata ggttttgctt
      961 ttgtaaatgt tgttttgtat cctctatcaa aaactaatat tacatattta tcattatttt
     1021 cattggtttt attattatta atattatctc cttcattttg ctcttgagca tttgctaaag
     1081 gtatattata aaaatctaaa gaaatatgat tcttgtcaaa taaattaaaa gaattacttt
     1141 tgtaatagta gttaatgtta gaaagagcct ccttgctaaa aatattacca ataacagtac
     1201 taagatttga agatgatatt gcattgttat ctaatactaa gaaccctatt ccaaaaagaa
     1261 aaggaatacc aaaagataaa tatctattca ttattgccaa tcctctaaac aatacttttt
     1321 atgtttagat tatattaaaa ttgagcgaaa cttttcacta taaccttcta aatttgcact
     1381 tactaaatat gatggagggc tatggctttt ataaaaagca ataataaatt acaaatatat
     1441 tttcaattgt ttcatcttca attataaaat actttttcat agtttgtaac aaatctaaga
     1501 aaattattgt aacatattat tgaatattat aaaagatact aactaaattc tataataaag
     1561 agtgataatt attatataaa ataagaaata ttaagtaaaa aacacaatga ataatacaaa
     1621 aattatgtca ttatcattat tttttatatt aactgtcatt acaatattaa ctattattaa
     1681 ttataattat tctagtaatc aattatcagc attatttatt ctcgctgaac cagacaataa
     1741 caacaaagaa aaaggagaca aaaaagagca agaacagaca aaagaagata aagatgaaga
     1801 taaagacgaa aatgaagatg aagataaaaa taaagaaaat agtaacaaaa agagtaattc
     1861 aaaaaattct tataaaatag atcctcgata tagatccttc tttcctccta caaaacaaat
     1921 agtaatacct gaaatttatc aatctgtacc taatggagag acatataggt ttaataaaac
     1981 taatccaaat gataaagtcc aagtagatga agaagaaaac aaaaaagtat ttacacaaca
     2041 aaactatgat gacatttgga gaatagatgg tggaaagccc aggatagata tccataccaa
     2101 agatgcagga ataattccag ataagcaaat aatcgataaa aatatgtcca aaagtatagt
     2161 acagagttgg aatttttctg aactaaagga tataggatat tggcataaac caagtgactg
     2221 gaaaaatgta gaagttactt tgatttttaa acttcttgat tcctcacgtt ctaaaggaga
     2281 tcaacatgct atttcaatag taacaagatc aataacccat agtcaacttg ataatgatta
     2341 taaaaagtct aaagatgaag cacaattttt ctgtggagga tcaagttacc acaacaatat
     2401 atcaaatgaa ggacatgtaa gaatgaaaaa agaacaatat catattgatt atgaatggga
     2461 acgctacaat gaaactttaa ctgtgggaaa agtagaaaaa atatataata aaataattgg
     2521 tttcaaaggt ataatataca acataaatga tactgcagta aaactagaaa cttgggtaga
     2581 tgtagaaaat ggtggcaaag gaccttataa aaaagtacat gaattgatag ataat
//
LOCUS       DATIAS010000389         2897 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_69145, whole genome shotgun sequence.
ACCESSION   DATIAS010000389 DATIAS010000000
VERSION     DATIAS010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69145"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            382..1047
                     /gene="serB"
                     /locus_tag="VLA74_07870"
     CDS             382..1047
                     /gene="serB"
                     /locus_tag="VLA74_07870"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HSF50659.1"
                     /translation="MLIIFDVEGVLLNAEYLPVLAQVFGPEKEKEIWDITKQGIRGEI
                     NWEDGIIKRVRALRGIKYEDAKTLAKNLEIMPGAKDLCSSLKKAGWKMIAVSGGFSII
                     TDRLKKELGLDLIFSNELIFKDGKLHDIDLRVTSDKSLLVRPFIKEFNIKKDEIVVVV
                     DGANDLKLFDLASYTVGFCPVDMVKKKADDVIEIRNLSLLKDLLEKRFGRSILNTVQR
                     KIS"
     gene            1051..1827
                     /gene="cofE"
                     /locus_tag="VLA74_07875"
     CDS             1051..1827
                     /gene="cofE"
                     /locus_tag="VLA74_07875"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HSF50660.1"
                     /translation="MPVSKLEVIPISIPSEIKPNDNLIDIILSSLRKSNSLGIKIKNK
                     DILVIAQKIISKQEGMFVELAHVIPSKQALEIKKSVDKDPRLIELILQESRKIIKIFN
                     KTMIVETNQGFICANAGIDQSNVSKNQDRVLLLPRNPDQTASRIRREIKRKTGKEIAV
                     IISDTFGRPFRNGQTNVAIGVSGVKPIKSYIGKKDMYGNVLKVTEIAIADEIAGASEL
                     VMGKSNKIPVVIIRGFNFTIARKSNIKDLNRREKLDMFRR"
     gene            2026..2256
                     /locus_tag="VLA74_07880"
     CDS             2026..2256
                     /locus_tag="VLA74_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HSF50661.1"
                     /translation="MEFKKIIDVRGLYCPEPVFRTKIEMEKMSIGERLKVVADDPQSE
                     EDISRWVNRNGHELLSIDKKEQDLEFVIKKAK"
     gene            2261..>2897
                     /locus_tag="VLA74_07885"
     CDS             2261..>2897
                     /locus_tag="VLA74_07885"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HSF50662.1"
                     /translation="MTISSTTETEIIQRIGNTPLIELPKFSVKDVRLFAKLEWYNPFG
                     SVKDRAAYWMIKDAEKNGKLRKNKSIIIEPSSGNTGIALTGIASSMGYKVEIVIPDKV
                     SDETKKILRNLGATVHETSDDLCPRVGAGTDQSIALARAISTPRPDIYYMPNQYENDA
                     NYLAHYESTGPEIWKQTNGSVTHFLTGCGTGGTITGTGVYLKEMNPNIKIIA"
BASE COUNT         1127 a          373 c          525 g          872 t
ORIGIN      
        1 ataatactta cttttggata tttataagat ttatttctat tttgatcaat ataatcttct
       61 aactttggtg atttggatat tgaatgtaac ataaaaataa gaaaataaac ccaggtaatc
      121 aatataccac ccattataaa tatcaaaata agcataataa taaataattc atacatcgcg
      181 attgttaatc tttaagtaga gtgaaccaat aaaaaaattt actgaattaa ttatatatgt
      241 tcaaatgccc tttattacag aaattatgac aatcataaaa attcacaaat tatatactaa
      301 tttttgttta tttattaact ttttaaataa ttatcagcta aacttaatat atcgaagaca
      361 ttgtggctaa agcaaatacc tatgctaata atatttgatg tggaaggagt tttgcttaat
      421 gcagaatatc ttccagtttt ggctcaagta tttggtccag aaaaagaaaa agaaatctgg
      481 gatataacta aacagggaat aagaggagaa attaattggg aagacggaat aataaagaga
      541 gtccgtgcgt taagaggaat aaaatacgaa gatgccaaga cattagctaa aaatttggaa
      601 ataatgcctg gagcgaaaga tctctgttct tcgttgaaaa aagctggatg gaaaatgatt
      661 gctgtgtctg gaggatttag cataattaca gataggttaa aaaaggaatt aggactagat
      721 ttaatcttct caaatgagct tatttttaaa gatggaaaat tgcacgatat tgatcttagg
      781 gtaacatctg acaagtcgtt gctcgtaagg cctttcataa aagaatttaa tattaagaaa
      841 gatgagattg ttgtggttgt cgatggcgca aatgatttaa aattgttcga cttagcttca
      901 tatactgtgg gtttttgtcc tgtagacatg gtaaaaaaga aggctgatga tgtaatagaa
      961 ataagaaact tatccttact taaagatctt ttagaaaaaa gatttggcag gtcaattctg
     1021 aacacagtcc agagaaaaat atcttgaaga ttgccagtta gcaagttaga agttattcct
     1081 atttcaattc cttcagaaat caagccaaat gacaatctta tagacattat tttaagttct
     1141 ctgcgcaaaa gtaatagttt gggtataaaa ataaaaaata aagatattct ggttattgct
     1201 caaaaaataa tatcgaaaca ggaaggaatg ttcgtggaat tggcacatgt cataccttcc
     1261 aaacaggcac ttgaaattaa aaaaagtgta gacaaagatc ccaggttaat agagcttatt
     1321 ttacaagaat cacggaagat aattaaaatt tttaataaaa ctatgatagt tgaaacaaat
     1381 caaggtttca tttgtgccaa tgcgggaata gatcaaagta acgtgagtaa gaatcaagat
     1441 agagttttac ttttaccaag aaacccagat caaacagcaa gccggatcag aagagaaatc
     1501 aagagaaaaa ctggaaagga aatagctgtc attatttcag atacatttgg tagacccttc
     1561 aggaatggtc aaactaatgt agcaataggt gtatctggag tcaaacctat caagagctat
     1621 attggtaaga aggatatgta cggaaacgtc ctaaaagtaa cagaaattgc tattgctgat
     1681 gaaattgctg gggcttctga actagtaatg ggaaaatcta acaaaattcc tgttgtgatc
     1741 ataagaggtt ttaattttac tattgcaaga aaatctaata ttaaggattt gaatagaagg
     1801 gaaaaactag atatgtttag aagataaaaa ataaattcaa tctattcaca atttatcgtt
     1861 tttcatagaa aaattttaag tcaaaaacga ttaaatcttt attatttgta taaaatgtct
     1921 ttaatatact ataactattc tttttagaat tccacttcct taaagtcata aacattttat
     1981 attacattca ggtgttttat ttgtgatcac cagttgattg ataatatgga atttaaaaag
     2041 attatcgatg taagaggtct ttattgtcct gaaccagtat ttaggacaaa gatagaaatg
     2101 gaaaaaatgt ccattggaga aagattgaag gtcgttgctg atgatcctca atctgaagaa
     2161 gacatttcca gatgggtaaa cagaaatggt catgaattgc tttctattga taagaaagaa
     2221 caagatctag agtttgtaat taagaaggct aaataacaaa atgactatat cttctactac
     2281 agaaacggaa ataattcaaa gaataggtaa tacgcctttg atagagttac ctaagttttc
     2341 agtaaaagat gtaagacttt ttgcaaaatt agaatggtac aatccttttg gttctgtaaa
     2401 agatagagca gcttattgga tgataaagga tgctgaaaaa aatggaaaat tacgaaaaaa
     2461 caagagcatc ataatagaac catcatcagg aaatactgga attgctttaa ctggaatcgc
     2521 ttcgtcaatg ggatacaagg tagaaattgt catacctgat aaagtgagcg acgaaactaa
     2581 aaaaatttta agaaatttag gtgcaacagt tcacgaaaca tctgatgact tgtgccctag
     2641 agtaggagca ggaactgatc aaagtattgc cttagcaaga gctatatcaa ctcctagacc
     2701 tgatatttat tacatgccaa atcaatacga gaatgatgca aattatctag cgcattatga
     2761 aagtaccgga cctgaaatat ggaagcaaac aaatggatca gtaacacatt ttttgactgg
     2821 atgtggtact ggtggaacta ttactggaac aggagtgtat ttaaaagaga tgaatccaaa
     2881 tataaaaatc atagccg
//
LOCUS       DATIAS010000390         7478 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1840917, whole genome shotgun sequence.
ACCESSION   DATIAS010000390 DATIAS010000000
VERSION     DATIAS010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7478
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840917"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(262..519)
                     /locus_tag="VLA74_07890"
     CDS             complement(262..519)
                     /locus_tag="VLA74_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50663.1"
                     /translation="MKYRSRTEIVAMILEAANGGATKTKIMYKAFLSYAQLREYLSVL
                     IENNLLEYLDGSQTYKTTEKGLNFLKMHNEIGELLQTPVKF"
     gene            761..2722
                     /gene="acs"
                     /locus_tag="VLA74_07895"
     CDS             761..2722
                     /gene="acs"
                     /locus_tag="VLA74_07895"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HSF50664.1"
                     /translation="MSAKHSMEKYSDIFYINHNLKITIKNGKFQEKRNKSLEDIEKFW
                     AEEAKNLLWFKYWDKILRWNPPFAKWFDGGSLNASVNCLDKHVESDNKNKVALIWEGE
                     NGESRILTYYHLYCYVNQFSNALKSLNVTKGDRVTIYLPMIPEILIAILACSRIGAIH
                     NVVFSGFSEQALADRINDAESKIIITADGGFRRGKLLELKSIVDQTIPNTPSVQNVVV
                     FKRASNPVNMTDKDVWWHDIIKNQSSYCQPEQVESTHPLFILYTSGTTAKPKGVVHGT
                     AGYLTHTYSTAKWVFNFNKQDIFFCTADIGWITGHSYIVYAPLMHGVTELIYEGTPDY
                     PHPDRYWALVEKYGVSILYTTPTALRTYMRYENDIPNSFNLSSLRLLGTVGEPINPQV
                     WMWYFTIIGKERCAIVDTWWQTETGGIMISHCTGIETMPMKPGSAMFPIPGIDIDVVD
                     EENNHLSENQKGYLVVKKPWPGMFMTLWKDDDKYKKNYWKKIQKNLYYLTGDYAIIDN
                     ESYFWLLGRTDDVIKVSGHRLSTIELESTFISHRSVSEAAVTSKPDITKGQSIVAFIV
                     LKTGFVGSKELHQELVKHLRKSIGPIATPEQIYFVNKLPKTRSGKIMRRLLKSIVSDL
                     KICDTTTLEDGTSIEEIQKMYNELNKIVR"
     gene            2846..3337
                     /locus_tag="VLA74_07900"
     CDS             2846..3337
                     /locus_tag="VLA74_07900"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HSF50665.1"
                     /translation="MVRKAAVLIPAAVVSFFIGIIGIIFIPDEIKDKSVDFDKGTIKI
                     DNSIINVEIAESDAERQRWLMFREDKFPSNAGIILVYPLLDLHSLWLLNIQYNLDIMW
                     FDDHGNLVYIIKDAKPCPNILDPQKCTFKTTIPSKYIFVSTSGFINKNNITNTSKMTI
                     ISI"
     gene            3482..3775
                     /locus_tag="VLA74_07905"
     CDS             3482..3775
                     /locus_tag="VLA74_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSF50666.1"
                     /translation="MPVAILPDISEQHCIGCALCVEICTALGPDVLRVKPVEGWKRGK
                     AFVFYPERCISDGACIGVCPTKAIFWMRPMDYTPGQPIPLKKHGLFKTGWEEG"
     gene            3886..5520
                     /locus_tag="VLA74_07910"
     CDS             3886..5520
                     /locus_tag="VLA74_07910"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HSF50667.1"
                     /translation="MDNSVDSFSEDEKRILLSHFSNTDKPIFAITTPRQVDRGALMSR
                     YSRSDKTMRRIFLDEFVKNPYRGEEFYKKVLLEYGDDSVAELGEMQLAIESISNIAAK
                     NIEDHRIGLSYLEKSSRYVSFNKKINGKYKYLRENKIMDSSYADMYIEACDFAFDTYS
                     ENIEPMQKFLSEIEPIENFHFFDSYSNHEKFFNNLKDPEDIKSAQRIYNSTIKAKSLD
                     ILRGILPASTLTNLGITGNGRAFEYLLSKMYSSSLHEMNNLADQLYEELDLTISSFIH
                     RVKSNHGISMQNYLKETKIMIIELAFTHLSKLIPDNNPDYITLLYYENNFDAEIKVAS
                     AILYQQALGHSLATIINYVKSLSEEERHKIINTYTSLRTNRRQRPGRAFEMIEYTFEM
                     FTNFGMFRDLHRHRILTLERQLLSTRHGYDIPNEIIELGITKNFKDCMYKCDEVFKII
                     AKDNPEEAQYVVNFAYRYPYFIKLNLREATHMIELRTLPQGHPDYRYICQEMYKKIRN
                     VHPLLCQGIKFVDLNTYKLERLSSEKKIEKKKRNIN"
     gene            complement(5612..6652)
                     /gene="fen"
                     /locus_tag="VLA74_07915"
     CDS             complement(5612..6652)
                     /gene="fen"
                     /locus_tag="VLA74_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease-1"
                     /protein_id="HSF50668.1"
                     /translation="MIDSTMGIDLKPIITSSPIKLSDLSDKIIAVDAYNTIYQFLATI
                     RGPTGESLTNNKGDITSHLSGLFYRNINFLSENIKLIYIFDGKPHQLKSKEIEKRKKL
                     KQEAVEKYQVALAEGRLEDARKYSQGTVILTGKIIEQSKKILELLGIPILQATSEGEA
                     AASHLTRNGIVFACGSQDYDSLLFGAKKLIRNLTITGRRKIPNKNKYVSIEPEIIYQS
                     LILESTKLTLEQLVDVGILIGTDFNPGGFPGIGPKTALKLIKENGRLEKINKIKQSLE
                     NVPYQEIREIFLHPEDISIEKIEFKDPDSNEITSFLCEKMDFSKERVEMSLDRLKKIR
                     ERRNQSLEKWFV"
     gene            complement(6980..7435)
                     /locus_tag="VLA74_07920"
     CDS             complement(6980..7435)
                     /locus_tag="VLA74_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50669.1"
                     /translation="MSIKDDDEKDEMMEAGKIEDYDIEKLANMDNIIHQKIQLWTNDD
                     GNEYALRLLLDGDINSDKQEFIASTNPNEKYIYPVAESDDIEDLRHGWDYTLRELIEN
                     YKEKLYQQNFRDDKHLYHIKLISFHKCTYCNKKFANEEEKKEHEFIWHI"
BASE COUNT         2742 a         1087 c         1090 g         2559 t
ORIGIN      
        1 caagtaatta atagttagca aaaaataaaa aataaatttc tttttataat tactcttttt
       61 attattagta atagtttttt agaaatctaa ttaggtcaat attgtttctt atatatcaaa
      121 attttgctac cttaaatata acatacagtc tagataaata gaaatttagt agaataatat
      181 atcttaatta ttgttaattc agtgttttat aaaaaataat aaaaaaagag taatttttct
      241 gccttttttt attccaactt cttagaattt tactggagtc tgtaatagtt ctccaatttc
      301 attatgcatc ttgaggaaat ttagtccttt ttctgttgtc ttatatgttt gagatccatc
      361 aagatattcc aagaggttgt tttcaatcaa aacagaaaga tactccctta attgtgcata
      421 acttaggaaa gctttgtaca taatttttgt ctttgttgct cctccattag ctgcctctag
      481 tatcattgct actatttctg ttctacttct gtatttcacg atcatcatac acaataatta
      541 tttattttaa tatattgcca gaatgtagta taacattatt ctatttcaag agtaaattga
      601 taataaaaga taaacatttt tctttttaat ataaatttga tgtaatagtt acaaactctg
      661 tattttaagt atataaaaat acgggttaaa atcattcaac taactagttt tacaattaat
      721 aataattaat taatcagata taatcttaat acatataaaa atgtccgcaa aacattctat
      781 ggaaaaatat tctgacatat tctatataaa tcacaattta aaaattacaa taaaaaatgg
      841 aaaatttcaa gaaaaaagaa acaaatcgtt ggaagatata gaaaaatttt gggcagaaga
      901 agctaaaaac ttactatggt ttaagtattg ggataagata cttagatgga atcctccgtt
      961 tgcaaaatgg tttgatggtg gatcgttgaa tgcttccgtc aattgtttag ataaacacgt
     1021 agaatctgat aataaaaata aagttgcatt aatttgggaa ggagaaaacg gagaaagtag
     1081 aatactaaca tattatcatt tatattgtta tgttaaccag ttctcaaatg cattaaagag
     1141 tctgaatgtt acaaagggag atcgcgtaac catttatctt ccaatgattc cagaaattct
     1201 aatagctatc ttagcatgtt caagaatcgg tgctatacat aatgtggttt tttctggttt
     1261 tagcgagcaa gcattagctg acagaattaa tgatgcagaa tcaaaaataa ttattactgc
     1321 agatggtggg tttagaagag gaaagttact agaattaaaa agtatagttg atcaaacgat
     1381 tcctaatact ccatctgtac aaaatgtagt tgtatttaaa agagcttcaa atcctgtcaa
     1441 tatgacagac aaagatgtat ggtggcatga tattattaaa aatcaatcat cttattgtca
     1501 gccagaacaa gtagaaagta cacatcctct ctttattctt tacacctctg gaaccactgc
     1561 aaaacctaaa ggggttgtac atggaactgc tggttacttg acacatactt attcaacagc
     1621 aaaatgggtt ttcaacttta ataaacaaga catcttcttc tgtacagctg atataggatg
     1681 gattaccgga catagttaca tagtttatgc tcctttaatg catggggtga cagaactaat
     1741 ttatgaagga acacctgact atcctcatcc cgataggtac tgggcacttg tggaaaagta
     1801 tggtgtaagt attttgtata caacaccgac agctcttaga acgtatatgc gatatgaaaa
     1861 tgacattccc aactcattta atttgtcctc cttaagatta ctaggcacag taggggaacc
     1921 aataaatcca caagtgtgga tgtggtattt cacgatcatt ggaaaagaaa ggtgtgctat
     1981 tgttgatacc tggtggcaaa cagaaactgg gggaataatg attagtcatt gtaccggaat
     2041 agaaacgatg cccatgaagc caggttctgc tatgtttccc atacctggaa tcgatataga
     2101 tgtggtggat gaagaaaata atcatttgtc agaaaatcaa aaaggatatc ttgtagttaa
     2161 aaaaccttgg cctggaatgt ttatgacgtt gtggaaagat gatgataaat ataaaaaaaa
     2221 ttattggaaa aaaattcaaa aaaatctcta ctatcttacc ggggattatg caataatcga
     2281 taatgaatcc tatttctggc ttttaggaag gacagatgat gtaataaaag tatctggtca
     2341 tagattgagt accattgaac tagaaagtac ttttatatct catagatctg taagtgaagc
     2401 tgccgtaaca agtaaacctg atattacaaa aggacaatcc attgtagcat ttatagttct
     2461 aaaaacaggt tttgttggat caaaggaact acatcaagaa ttagtaaaac atctaaggaa
     2521 aagtattgga ccaattgcta ctcctgaaca aatatacttt gtaaataagc ttccaaaaac
     2581 aagaagtgga aagattatga gaaggttact aaaatccata gtaagtgatt tgaaaatatg
     2641 tgatacaaca acactagaag atggaacatc tattgaagaa atacaaaaga tgtataatga
     2701 attaaataaa attgtccgat agtttagtta attgacgtta gtttaataac atagtcaaaa
     2761 taaaaataaa aaataaaact gctaatataa taattataaa gacagaaaga aaaattcaaa
     2821 tcaaagagat tttttatatg atttattggt tcgaaaggca gctgtattaa taccggctgc
     2881 tgtcgtatct ttttttattg gaataattgg aataattttc ataccagacg aaattaaaga
     2941 taaatcagta gattttgaca agggaacaat caaaatagac aattcaataa taaatgtgga
     3001 aatagcggaa tctgatgctg aaagacaaag atggttaatg tttagagaag ataaatttcc
     3061 atcaaatgct ggaataattc ttgtatatcc actgttagac ttacattcat tatggttgtt
     3121 gaatatacaa tataatttag atattatgtg gtttgatgat cacggaaatc ttgtctatat
     3181 cataaaagat gcaaaacctt gtccaaatat tctagatcct caaaaatgta catttaaaac
     3241 tactattcca tcaaaatata tattcgtatc aacatcagga tttatcaata aaaataatat
     3301 tacaaataca tcaaaaatga ctataatttc tatttgaata ctacatctca atttttttgg
     3361 ttatcagatg gttatgcata ttaatctctc ctctaatgac aaaagttgat attatatcgc
     3421 tgttatacgt acaacatagg gtttaaatag tttcaggaag aaccgaacag cagtgaatta
     3481 aatgccagta gcaatacttc cagatattag tgaacaacat tgtattggat gtgcactttg
     3541 tgtagaaatt tgtactgctc ttggtccaga tgttcttaga gtaaaaccag tagaaggctg
     3601 gaagagaggt aaagcctttg tattttatcc agaaagatgc atctctgatg gtgcatgtat
     3661 aggcgtttgt ccaacaaagg caatattctg gatgagacca atggattaca caccaggaca
     3721 accaattcca ttaaagaagc acggattatt caaaacaggt tgggaagaag gttaaaaatc
     3781 accctcaatt ttattttatt tttttgtagt tatttctaaa aattaagtta attttcagtt
     3841 aagaattggt ttaatttatt atactcaaat tatatttctt aatagttgga taattcggtt
     3901 gattcgtttt cagaagatga aaaaagaatt cttttatcac atttttccaa tacagacaaa
     3961 cctattttcg cgataacaac acccagacaa gtcgatcgtg gcgcattaat gtccagatat
     4021 tcaagatctg ataaaacaat gcgtagaatc tttctagatg aatttgtaaa aaatccatat
     4081 cgtggagaag agttttacaa gaaagtgcta ttagaatatg gtgatgactc tgttgcagaa
     4141 ttaggagaaa tgcaattagc tattgaatca atatctaata tagccgctaa aaatatcgaa
     4201 gaccatagaa tagggttatc atatctagaa aaatcatcac gttatgtttc ttttaacaag
     4261 aaaattaatg gcaagtataa gtacctaaga gaaaacaaaa tcatggattc ttcttatgct
     4321 gatatgtata ttgaagcttg tgattttgcc tttgatacat attcagaaaa tattgaacca
     4381 atgcaaaaat ttttatcaga aattgaaccg atagaaaatt ttcatttctt tgattcatat
     4441 tctaatcatg aaaaattttt caataatttg aaggatcctg aggatattaa atctgcacaa
     4501 cgtatataca atagtacaat aaaagccaaa tcgctagata ttttacgtgg aattttacct
     4561 gcttctacat taaccaatct aggaatcact ggaaacggaa gagcatttga atatttactt
     4621 tcaaaaatgt attcttcatc tttacatgaa atgaataatt tggccgatca actatacgaa
     4681 gaacttgatt taacaatatc gtcatttata catagagtaa aaagcaatca cggcatatca
     4741 atgcaaaatt atcttaaaga aacaaagatt atgattattg aattagcatt tacacatctg
     4801 tctaagctta ttccagataa taatcctgat tatattactc tattatacta tgaaaataat
     4861 tttgatgcag aaattaaagt agcatctgcc attttatatc aacaagcttt aggtcattct
     4921 ctagcaacaa ttatcaatta tgtaaagtca ttatctgaag aagaaaggca caaaataatc
     4981 aatacctata caagtttacg aacaaataga agacaacgtc caggtagagc cttcgaaatg
     5041 atagaatata catttgaaat gttcactaat tttggcatgt ttcgtgatct tcacagacat
     5101 agaatactaa ctttagaaag acaattactc tcaaccagac acggatatga cattcctaat
     5161 gaaattattg aattgggaat aaccaaaaat ttcaaagatt gtatgtataa atgcgatgaa
     5221 gtcttcaaaa tcattgctaa agataatcca gaagaagcac aatatgttgt aaattttgcc
     5281 tatagatatc catattttat caaactaaat ctaagggaag caacacatat gattgaatta
     5341 aggacactac cacaaggaca ccctgattat cgttacattt gtcaggaaat gtacaagaag
     5401 ataagaaatg tacatccact attatgccaa ggaataaaat ttgtcgatct taatacttac
     5461 aaattagaaa gattgtctag cgaaaaaaaa atagaaaaga aaaaaaggaa tataaactaa
     5521 taataaattg taaattcttt taccattttt atttttatat tattgataga aaaaaaaatg
     5581 ttatgtcatg tcttaaaaaa atggttcata ctcaaacaaa ccatttttct aaagattgat
     5641 tgcgtctttc tcgaattttt tttaatctat ctaaagacat ttcgactctt tcttttgaaa
     5701 aatccatttt ttcacacaaa aaactcgtaa tttcattaga atcaggatcc ttaaattcta
     5761 ttttttcaat tgatatgtct tcaggatgaa gaaaaatttc tcttatttct tgataaggaa
     5821 cattttccaa actttgtttt atcttgttaa ttttttccaa tctaccattt tccttaatta
     5881 attttaatgc agtttttgga ccaatacctg gaaaaccacc aggattaaaa tccgtaccta
     5941 ttaaaattcc tacatccact aattgttcta atgtcaattt tgtcgattcc aaaattaatg
     6001 attgataaat aatttctggt tctatactta catatttatt tttattggga atctttcttc
     6061 taccggttat tgttaaatta cggatcaatt ttttagcacc aaaaagcaag gaatcatagt
     6121 cttgacttcc acaagcgaaa acaatcccat ttcttgttaa atgtgatgct gctgcctctc
     6181 cttctgatgt tgcttgaaga ataggaattc ctaaaagttc taaaattttt ttcgactgtt
     6241 ctattatttt accagttaaa atcactgtac cctgactata tttgcgtgcg tcttcgagtc
     6301 tgccttcggc taatgcaact tgatattttt caaccgcttc ttgtttcaat ttctttcgct
     6361 tttcaatttc tttagatttt agctgatgag gtttaccatc aaatatgtat attaatttta
     6421 tattttctga taaaaaattg atatttctgt agaataatcc acttagatga cttgttatat
     6481 ctcccttatt gttcgtaaga gattcaccgg ttggaccacg aatagtggca agaaattgat
     6541 atattgtatt gtatgcatca acagctatta ttttatctga cagatcagaa agttttatcg
     6601 gagaagaagt tatgataggt ttaagatcta ttcccattgt tgaatcaatc aataataata
     6661 tttcatctct tttatttttt aatttgatga tgctagatat tcaattgaaa gtaatacagt
     6721 ataaatactc ttttaaaata aattgaaata taacccattt caaaaataga aataaacttt
     6781 cctgttgtta taacaaatac cataaaaata gaagattaca tcaattaaga aaagattaaa
     6841 aaaatgaaat acatgttaga attactcata aaatttatca atatatataa aaaaatgttt
     6901 ttattcatgt agcttaatct tttcaaaata ttaaattaat tgtaaatcat ttaacaaaat
     6961 catttgtatt gttcatatct caaatatgcc aaataaattc atgttccttt ttctcttcct
     7021 cattagcaaa ttttttatta caataagtac atttatgaaa agatatcaat ttgatgtgat
     7081 acaaatgttt atcgtctcta aaattttgtt gatacaattt ttccttgtaa ttttcaatca
     7141 attctcttag tgtataatcc caaccatgtc ttagatcctc aatatcatca gattccgcaa
     7201 ctggatatat gtacttctca ttaggattgg ttgatgcaat aaattcctgc ttgtcggaat
     7261 tgatatctcc atctagtaac aatcggagag catattcatt cccatcgtca ttagtccata
     7321 actgaatttt ttgatgaata atattatcca tatttgcaag tttttcaata tcataatctt
     7381 caatcttacc agcctccatc atttcatctt tctcatcatc atctttaatt gacaagtaca
     7441 ttttaacaat actatcaaga ttttaagtat tcatatct
//
LOCUS       DATIAS010000391         3304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_206557, whole genome shotgun sequence.
ACCESSION   DATIAS010000391 DATIAS010000000
VERSION     DATIAS010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206557"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VLA74_07925"
     CDS             <1..225
                     /locus_tag="VLA74_07925"
                     /inference="COORDINATES: protein motif:HMM:NF025696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50670.1"
                     /translation="PIFYDRTHWALTYLKHAGLLTGTRWGFFKITERGKRILNQNPTK
                     IDDNYLKQFPEFVEFQIGKREKPKSGSEKM"
     gene            342..533
                     /locus_tag="VLA74_07930"
                     /pseudo
     CDS             342..533
                     /locus_tag="VLA74_07930"
                     /inference="COORDINATES: protein motif:HMM:NF016362.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
     gene            complement(909..1292)
                     /locus_tag="VLA74_07935"
     CDS             complement(909..1292)
                     /locus_tag="VLA74_07935"
                     /inference="COORDINATES: protein motif:HMM:NF016178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HSF50671.1"
                     /translation="MSLKQPFADLLAHGEKTIELRKWNTSFRGEFLIHASKNIDIESC
                     ERLDMNSNKFTIGTIIGSAFLYDVKEYNNQQEFEKDRHKHFSVVTKYFEGYRYGFLIR
                     DAKLLKNPIPYPGKLRFFEVDENII"
     gene            complement(1709..1782)
                     /locus_tag="VLA74_07940"
     tRNA            complement(1709..1782)
                     /locus_tag="VLA74_07940"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1746..1748),aa:Thr,seq:cgt)
     gene            1912..3249
                     /locus_tag="VLA74_07945"
     CDS             1912..3249
                     /locus_tag="VLA74_07945"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50672.1"
                     /translation="MKVSISGIRGIYGEDLTLNEIYRFSSMFSLFLKNSKKESVKCIV
                     ARDTRHSGEIIKKIIVSSLLENGIDVYDMNISPTPVIFRESRKFEGAIIITASHNPIN
                     WNGIKFIIKGRGLFEYELKELLSKKSYHDILPPYGTLENFSSTYSNELLELLQQSKDG
                     DSHPKKIGIDGGGGATCCYVEDLFKKIGHITYVINGNPSIFSRGPDPTTDNLIQLKSI
                     VKSCDLDYGFSFDLDGDRLVVVSNNGQKLNSDSTLLLCIAKCMNKFKIKNFVTSLDTS
                     NAIDQFIKNNNGNLIYSKVGEANVVQKILETNADAGGEGSSAGFIMSNFNWCRDGILA
                     SVLISTIDQSLFQECMDLASNYSQIRDKMSINIDLQDKIMEKLQEEFKSDSTEIITID
                     GIKIILDDTSSILFRSSNTENALRISIESNPYKIKSIYRTTINRVKKIYDQTK"
BASE COUNT         1225 a          441 c          516 g         1122 t
ORIGIN      
        1 cctatttttt acgatagaac gcattgggca ttgacttatc taaaacatgc tggattatta
       61 acaggaacaa gatggggatt ttttaaaata acagaaagag gtaagcggat attaaatcaa
      121 aaccctacaa aaattgacga caattactta aaacaatttc ctgaatttgt agaatttcaa
      181 attgggaaaa gagaaaaacc aaaatctgga agtgaaaaaa tgtaaaagat aaaacaccat
      241 ctgaattact tgaagaaagt tataaaataa taaatgatga attaggaaaa aaattattag
      301 ctcaagcaaa aaattgtgat ccttaatttt ttgaaagact agttatcaca ttgttggtta
      361 agatgggata tggtggttct attaaagaag ctggtgaaag cataggacga cagggagatg
      421 aaggaattga tggtgttata aaagaagatg cattaggttt agatgttctc tatattcaag
      481 ctaaaaaatc aacctgtata attcgacaag ccagaaattc aaaaattcgt tgaagcaatt
      541 tttattacta taggaacttt ctttaatcaa gccaaagatt atgtatccaa aatcgtgagc
      601 tcaattgtct taattgatgt gaaacaggta acagaaccta tgagtttttc ttcaaatttc
      661 ctaagaattt taccccgaat aaaaataaat tcgtaaatca atatttgaaa ttttaatatg
      721 aacttttata ctggctatat ccaaataatc aaaatgttta ttatacttat gttctaaatg
      781 tatacaggat ggcagcaaaa aagaagagta agagtaaggg cacgaaaaaa aaataaagcg
      841 ttagcatcta ttttctattt tttgtctaac tcttctcatt cgtttattgg cactcttgta
      901 tgttattttc aaattatatt ttcatcaact tcaaagaatc ttaacttgcc tggataaggg
      961 attggatttt ttaacaactt tgcatctcta atcaagaaac catatctata gccttcaaaa
     1021 tactttgtaa ccacagaaaa gtgtttgtgt ctatcctttt caaattcttg ttgattatta
     1081 tattctttaa catcatatag aaaagcagaa cctattattg ttcctattgt aaacttgttg
     1141 ctattcatat ctagtctttc acaggattct atatcgatat tttttgaagc atgtattaga
     1201 aattctcctc taaatgaagt attccatttt cttagctcta ttgtcttttc accatgagct
     1261 aaaaggtctg caaaaggctg ttttaatgac aaacatttca tggtatgccg gtgtattgtt
     1321 acaagtaact tgtaatttta ttttatgtct ttgtatgttt tgtcatttat ttatgctaga
     1381 tttcaatcta gcggaatgcg tttttgatgt tcgaatattg gcattggatg ctttatcatt
     1441 atgtaaacat gcaaattttc tacaataata acaaaaacca caagaaggac atattggatt
     1501 tactaatgat ggtgtatatt caaaatagca attaagacat ttcatatatt ataaaataaa
     1561 ttatttgttt atcaatgtct ataggtaaat tgattgagta atagtagaca tttcattata
     1621 agtattgaac ttaaagttta tttccttgta atcatcttat aacaatttat gactcaacca
     1681 aacaagtgga cccgaggtca gaattctgag cctctggtgg gatttgaacc cacgacctaa
     1741 ggtttacgaa accttcgctc aaccaggctg agctacagag gcaacggtta ttcgttatta
     1801 taaaaattaa tttgcatcac ttgttttttg gtaacaagaa tctactatta accgatatat
     1861 attttacatt ctaccaacac aattaaattc tgaattttca aaagtagtat aatgaaagtt
     1921 tctatatctg gaattagggg catctatggc gaggatctta ctcttaatga aatttataga
     1981 ttttctagta tgttttcatt gtttcttaaa aattccaaaa aagaaagtgt aaaatgtata
     2041 gttgctagag atacaagaca ttcgggagaa ataataaaaa aaataatagt ttcaagtctt
     2101 ctagaaaatg gaattgatgt ttatgatatg aatatctctc caactccagt aatatttaga
     2161 gaatcaagaa aattcgaagg agctattatc attaccgctt cacataatcc aattaattgg
     2221 aacggtatca aatttatcat aaaaggaaga ggtttatttg aatatgaatt gaaagaattg
     2281 ttatcaaaaa aatcatatca tgatatttta cctccctacg gtactttaga aaatttttca
     2341 tcgacttatt ctaatgaact tttggagtta ttgcaacaat ctaaagatgg cgattcacat
     2401 cctaaaaaga taggtataga tggaggtggt ggagctactt gctgttatgt cgaggatctt
     2461 ttcaaaaaga taggacatat tacttacgtt ataaacggaa atccaagtat attttccaga
     2521 ggaccagatc caacaacaga taatttaatt caattgaaat ctattgttaa atcatgtgat
     2581 ctagattatg gcttttcatt tgatctggat ggagatagat tagtcgttgt atctaataac
     2641 ggtcagaaat taaattctga tagtacgctt ttgttatgta ttgcaaaatg tatgaataaa
     2701 tttaaaataa aaaactttgt tactagttta gatacaagta atgctataga tcagttcata
     2761 aaaaataata atggaaattt aatatactct aaagtaggag aagctaacgt cgttcaaaaa
     2821 atcttagaaa ctaatgctga tgctggaggt gaaggcagta gcgcaggatt tattatgtca
     2881 aactttaact ggtgtagaga tggcattctt gcaagcgtat tgattagtac tatagatcaa
     2941 tctttatttc aagaatgcat ggacctggca tcaaattatt ctcaaattag agataaaatg
     3001 tcaattaata tagatttaca agataagata atggaaaaat tacaggaaga atttaaatct
     3061 gattccacag aaataattac catcgatgga atcaaaataa ttcttgatga tacttcttcg
     3121 atattattta gatcttcaaa taccgagaat gcgttaagaa tttcaataga gtctaatcca
     3181 tataaaataa aatctatcta tagaactacg ataaacagag ttaagaaaat atatgatcaa
     3241 actaaatgaa aaacaaatta ttgatttatt tttttctaaa cttattaaaa aaaataaatc
     3301 aaat
//
LOCUS       DATIAS010000392         2432 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1840959, whole genome shotgun sequence.
ACCESSION   DATIAS010000392 DATIAS010000000
VERSION     DATIAS010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840959"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VLA74_07950"
     CDS             complement(<1..491)
                     /locus_tag="VLA74_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50673.1"
                     /translation="MPFNWNPIYIQQMEYLHIEFVIPKLLDLSNTNSYGGLIFEKNLP
                     TRSLIIDDYSDLNSRIIHLVLNKDQLDQLSRQISQDIDITNNQIPTSFKLYTIEKPQF
                     PLDILTSNEKFLVQISWNPSIITPSTPINFIMNLQDPKIGDLVRHSSFDFVVEDKNRI
                     IYT"
     gene            complement(659..1048)
                     /locus_tag="VLA74_07955"
     CDS             complement(659..1048)
                     /locus_tag="VLA74_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50674.1"
                     /translation="MSGKKIVVETKLEPAYINNSIDYTDPKFLLRIYDQLTNQTISDL
                     DYDIKIFSDKELLLNLCIKSSAGLFNSKLIPINITEAIISKNGVQLNSIDCIQNIKQN
                     DRFEITSKILSQGGLYHLSLLKKQVED"
     gene            complement(1912..2187)
                     /locus_tag="VLA74_07960"
     CDS             complement(1912..2187)
                     /locus_tag="VLA74_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50675.1"
                     /translation="MSSTIKCKLCGNFMDGSTCTSKTIIGRNEYNRIPYGIELVIKGV
                     REENTNLEGLCPDCNVHFNGYHHFPCEVEICPRCGYQFISCGCGVVV"
     gene            complement(2206..2406)
                     /locus_tag="VLA74_07965"
     CDS             complement(2206..2406)
                     /locus_tag="VLA74_07965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50676.1"
                     /translation="MSNNKDELINTHDCELRHGFNKRIRKFYIEIRDIETGNNMMVYL
                     DREDYKEIGQTIVENSSNYPDI"
BASE COUNT          840 a          345 c          326 g          921 t
ORIGIN      
        1 tctgtataaa ttatcctatt tttatcttct accacaaaat caaaactaga atgtcttacc
       61 aaatctccta ttttaggatc ttgtaaattc ataataaaat taataggagt tgatggagtt
      121 attattgaag gattccaaga aatttgaact aaaaattttt cgttagatgt taaaatatct
      181 aagggaaatt gtggtttctc tatggtatat aatttaaatg aagtaggaat ttggttatta
      241 gtaatatcaa tatcttggga gatttgtcga gataattggt ccaattgatc tttatttaga
      301 actaaatgaa taatgcgtga atttagatct gaatagtcat ctatgatcag ggatcttgtt
      361 ggaagattct tttcaaatat caaaccgcca taactattag tattagaaag gtcaagtagt
      421 tttggtatta caaattcaat gtgcaagtat tccatttgtt gtatgtatat cgggttccaa
      481 ttgaatggca tttcaaatgc taatgtatta ttttccttaa catagttaat atcccttaaa
      541 gaatcataat aacttttaat tataatatgg tttttttctt tagtagagtc ttgtatgttg
      601 aagtaatgat cttcacctat acttatgaat aagtcaaata ctatatcatt ttctaatgct
      661 aatcctccac ttgctttttt aaaagagata gatgatataa accaccctgt gagagaattt
      721 tacttgttat ttcaaatcta tcattttgtt tgatattttg tatacaatct atagaattta
      781 attggacacc attcttagaa ataatagcct ccgttatgtt tattggaata agtttagaat
      841 taaaaagacc agcgctagat ttgatacata gatttaaaag taattcctta tctgagaaaa
      901 tttttatatc ataatccaaa tcagagattg tttgattagt caactggtca taaatcctta
      961 ataaaaattt tggatcagta taatcaatag agttattaat atatgcaggc tctaattttg
     1021 tttctactac aattttttta ccagacacat caactggatt ggaaatatct gtactaagac
     1081 catgtccatt aacttggata taagaaattt taaagaggat taaaaatatg aatataaaaa
     1141 taccaataga attcattttt aaataatgaa taagataaaa acaacgatat taataaattt
     1201 cgaaaatagc aagtctagaa tatgtatttg tatataaaaa gttctagaaa taaaaaatat
     1261 aaaaataata tatttatgat aacaaaaaaa ttaccgatct atacgtaagg aaatgtcttt
     1321 aaaatttgtg gaataaaatt tttaacattg taattttttt attaattatt cttaagaaat
     1381 aaataacaaa atagaggcaa aaatgccttc caacccgacg agataattgc ataaatgctt
     1441 ggtattgata tttgggacta ttatctattg atttgcatat ttctacaaac ttgggatcat
     1501 gtcttaaagg acttgtttcg tctctttttc tgatttgctt atgcggaaaa cagttccgca
     1561 taaaggaatt ccaatctgct tttttattgt gaccgaacca attgtctata ctttttgctc
     1621 cttgaattgc ttgttctccg gtgtaccatg ctgcttcata ttactatgga tgaggaacgt
     1681 gttcctcatc gtaccatatc cttcctttat tttttagtat atataataat atgatagata
     1741 ttgaatatct aatattatta ttataatttg ttactctatt aggacaaata taattcttct
     1801 aaatacttta aagcatatat tttcactagt atcccgtaga tacgagtatt gcaattataa
     1861 acacagagtt taggattaag atagtatcag tagaatagaa ctcatttttt cttagactac
     1921 tactccacaa ccacatgaga tgaattgata accacaacgg gggcatattt ccacttcaca
     1981 aggaaaatga tgatatccat taaaatgaac attgcaatca ggacataaac cttcgagatt
     2041 agtattctct tctctaacac ctttaataac taattcaata ccatatggaa ttctattgta
     2101 ttcatttcta ccaattatcg ttttagacgt acaagtagaa ccatccataa agttaccaca
     2161 gagtttgcat ttgatagtag aactcatttc ttatgctttt ctcatctata tgtctggata
     2221 atttgatgaa ttctcaacta tggtttgacc tatctcttta tagtcttctc tatccaaata
     2281 caccatcata ttatttccag tctctatatc tctaatttca atatagaatt tacgtattct
     2341 tttgttgaat ccatgtctta attcacaatc atgagtattg attagttcgt ctttgttgtt
     2401 actcatttct taatcttatt attatcaatt ag
//
LOCUS       DATIAS010000393         8838 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1977779, whole genome shotgun sequence.
ACCESSION   DATIAS010000393 DATIAS010000000
VERSION     DATIAS010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8838
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1977779"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1396
                     /locus_tag="VLA74_07970"
     CDS             <1..1396
                     /locus_tag="VLA74_07970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50677.1"
                     /translation="INIDDPTPPPPPQGCPVGQHLENGQCVPDSPPPPGTGFLLVITD
                     VVNNNGGTKTSSDIDITVNGNNPVPSNFKGSQSPLAKIIALTEGVFSLTVNNNFGYQT
                     KFLNDCAGTIKAQETHVCVINLDDPITTVSSGSPQGCPAGQHFDQTTQTCVPDLPPPP
                     QGCPAGQHFDQTTQTCVPDLPPPPQGCPAGQHFDQTTQTCVPDLPPSGGVFPVQGINW
                     MYDSKQTLSNDISLPSGKTHPTDKVLLSSGASGVNSHPIKNGWLEIQSGGGNGRVYWN
                     YHELPQYSQLDTAGFNTVMTGTFKLKPGIENLSIKDGNHGTNGWVLDGKLVFGGFGFS
                     IHRTEVQSKAEYWHNRQGQEVASQYPNGITLQNDKEYKFFATMITDRINQEVVLNVWL
                     DFGDGKGWVLIMKDRKWAKSGWSPDSVPNGDDKSQIENGPSSIKKHHVWTRANGSGDL
                     PVKDIRIGTIGFIS"
     gene            complement(1816..2610)
                     /locus_tag="VLA74_07975"
     CDS             complement(1816..2610)
                     /locus_tag="VLA74_07975"
                     /inference="COORDINATES: protein motif:HMM:NF013213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSF50678.1"
                     /translation="MIGELDRTMEYFDAHIHLTDIEYSNYLENILFSLKSMDMKACSV
                     TVNIETTKRSFDIFSNSGEIVSQFVGIHPQYVLTDDLDIFKELVESNLDRVDGIGEIG
                     LDPTYCVGNEKDYEIQKKKFHDLLEIAEKYEKPISIHSRKSLDDILHVLPSYSIKNRL
                     LHWFAGSRKQLKKAMEMEFYVSYGPVLLYSPDKKVLLSNTDQEKILVETDGPVRYSNC
                     FNYIPSSSISCLVSVINYVGEILDSKFEEVKKILKNNSENFLGKKI"
     gene            3533..3994
                     /locus_tag="VLA74_07980"
     CDS             3533..3994
                     /locus_tag="VLA74_07980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50679.1"
                     /translation="MPVPNSIYSYGLIIAGSVFIAIAIYSVIYSNTSVKVDLDGIIKP
                     GSQDILSPNMEIGRNTVLGLSGSLFNVSITFPNKTSFLLINNASDFEYDFEAKQNGKH
                     IIKIFNLGNSEVLIDGYAYTKGNEIALVGQLMLLVTGIVILWMGIRIRRRN"
     gene            complement(3991..4815)
                     /gene="pheA"
                     /locus_tag="VLA74_07985"
     CDS             complement(3991..4815)
                     /gene="pheA"
                     /locus_tag="VLA74_07985"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HSF50680.1"
                     /translation="MAIKHKVAFQGENGAYSEMAVLTLFPDSVTVPMRSFQQVFDSVV
                     RSENDLAVVPIENSIEGSVNENYDLLLKNRIQIVGEIFQRIHHCLIVNQRHGEKILKV
                     FSHPQALAQCREYIYQKKLEPIASYDTAGAVKMIKEHNMTDSAAIASKRAAELYEMKI
                     IDEGVEDRKNNFTRFFVISKKITTKPTGNDRTSIIFGLEHSPGSLFKVLNEFAKESIN
                     LTKIESRPTKETPWEYYFYVDFEGHYMDQRIKRTLENIKKKSKFYKLLGSYKKGIF"
     gene            complement(4939..6762)
                     /locus_tag="VLA74_07990"
     CDS             complement(4939..6762)
                     /locus_tag="VLA74_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PINc/VapC family ATPase"
                     /protein_id="HSF50681.1"
                     /translation="MGKKFVLDTSIVIDKEITKMLYSGKINENDEIIIPHAVLDELQA
                     QASTNREHGFVGLQEIKEIREECRKRKIKLSFSGQRPDYDDILLAKHGRIDAIINQIA
                     LEEEGIIITADYVQHIAALAQGIESILIKPNNKIKEFKFEKFFSEQTMSVHLKDGVCP
                     YAKIGRPGNFQLVKLDEKAINNDFLKELIKEIYEFNPPDANKLYEINREGANVIQFGT
                     YRITITRPPFSDAIEITIVRPIVHLSLDDYKLSEKLLTRLDEKAEGIVIAGPPGSGKS
                     TLASSLAEYYTKKGKIVKTFESPRDLQVPKEVTQYSPLEGSFEKSVDILLLVRPDYTI
                     FDEIRRIRDFNVFADMRLSGVGMIGIIHANSPIDAVQRFIGKIEMGMIPHILDTIIFL
                     KDGLINKVYDLRLTVKVPSGMVEEDLARPLVEIFDYETGQLEYEIYTYGEENIVVPVR
                     ELTSNKESNNKLKRIAESKIKDVVRRFDPNAEIEIVSNNKVRIKVDKEFIPRIIGKGG
                     ATVSELEEIIGMKIDIEAKTPVLGNNVDYQINESGSSILFIVNKKEIGANVGIYVDNE
                     FLFSSQIGKKARIKIDKRSEYGKKLLNAILTSAEIKLFKTN"
     gene            6957..7472
                     /locus_tag="VLA74_07995"
     CDS             6957..7472
                     /locus_tag="VLA74_07995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50682.1"
                     /translation="MVILSKENTKLRLEEFRILLKYMPFLQKNGFSDCGRGQIMGQMF
                     LLQEFLNENQTNNEVVNIQQENSVLNDGLQDNTSNTASPPPQYYETAQPMESKSSNTE
                     PKNKTFDLDSLILEDEDTTDEENKLGSRWLRPFKNDDNGKKKPLDYFEKNEITQSWKE
                     KIRKMTQTDIL"
     gene            complement(7486..8631)
                     /locus_tag="VLA74_08000"
     CDS             complement(7486..8631)
                     /locus_tag="VLA74_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSF50683.1"
                     /translation="MSNENSYLEGFASIEGTKRFRENSLKKGIAENHFKKFDDLYLSS
                     IGMGTYLGDLSAHEDKEIEDALYESVKAGAINVIDTAINYRAMKSEKSIGRALQRLVK
                     DGIVTRDEIFISTKNGYITNDGDFPQIDVLQYMQKMYIAPGVIKASDISSGYNVLNPN
                     YISKCVERSICNLKLKTVDLLYIHNPFESWNQDVSKKEFLEMLYKVFEVYEKFRNEKR
                     IRYYGMATWTCFRVNKDNKDYLSLEEIHNLALNVGGEKHGFRFIQLPYNLAYSEALFL
                     KNQSIDEEKNLTILDAAMKLQIGVFSSVPLFQGRLLKTNISDYAENMTNQIFKLVQII
                     RSTPGIIAPLLGQKKMEHVKENIKIAEIPLLSNDEFKSALRMLIDEK"
BASE COUNT         2861 a         1482 c         1280 g         3215 t
ORIGIN      
        1 tatcaatata gatgatccaa caccaccacc tccaccacaa ggatgtccag tcggacagca
       61 tcttgagaat ggtcagtgcg tcccagattc acctcctcca ccaggaactg gatttctttt
      121 agtaattaca gatgttgtta acaataatgg cggtacaaaa acatcttctg atattgatat
      181 tactgttaat ggtaataatc ctgttccatc caatttcaaa ggatctcaat caccattagc
      241 aaaaattatt gcgctaactg agggagtatt ctctctaact gttaataata attttggcta
      301 tcaaacaaag ttcctaaatg attgtgccgg tactatcaag gctcaagaaa cccatgtctg
      361 tgttataaat ctggatgatc cgatcacaac agtttcttca ggatcaccac aaggatgtcc
      421 agcaggccaa cactttgacc aaacaacaca aacatgtgtc ccagacttac cacctccacc
      481 acaaggatgt ccagcaggcc aacactttga ccaaacaaca caaacatgtg tcccagactt
      541 accacctcca ccacaaggat gtccagcagg ccaacatttt gaccaaacaa cacaaacatg
      601 tgtcccagac ttaccaccat caggcggggt atttccagta caaggtatca actggatgta
      661 tgattcaaaa caaacattga gcaatgacat ctccctacct tcaggaaaga cacatccaac
      721 tgataaggtg ttattgtcta gtggagccag tggtgtaaat tcacatccta tcaagaatgg
      781 ttggctagaa atacaatcag gcgggggaaa tggtagagta tactggaatt atcatgaatt
      841 accacaatat tcacaattag acacagctgg tttcaatact gtaatgacag gaacatttaa
      901 gctaaaacct ggaatagaaa atttatcaat aaaggacggc aatcatggta caaatggatg
      961 ggtcttggat ggtaaattgg tatttggtgg attcggattt tcaattcata ggactgaggt
     1021 tcaatcaaaa gcagagtatt ggcataatag acagggtcaa gaagtcgctt cccaatatcc
     1081 aaatggtatc acgctgcaaa atgacaaaga atacaaattc tttgcaacca tgataactga
     1141 cagaattaat caagaggtag tacttaatgt gtggttagat ttcggtgatg gtaaaggctg
     1201 ggtccttatt atgaaagata ggaaatgggc caagtctgga tggagccctg atagtgttcc
     1261 aaatggagac gataaatcac aaatagaaaa tggtccatca tctattaaaa aacatcatgt
     1321 ttggactaga gcgaatggat caggagattt acctgttaag gatataagaa taggtactat
     1381 aggatttatt tcctaattta caaatttttt gttatgatta tttagtattt tacttatttc
     1441 aaatcaaaac gatcgtaagt aaaatatttt ttatgaagta ttacaattcc ttataaataa
     1501 tctgttcaaa ttttactggg gatctaatcc caatcctatt tttctatata tccattatcg
     1561 agaagattaa caataattta cataataaaa gtacataaat tttacgtaac aatgttgtta
     1621 gttacttaat atttcatagt tggtaattaa attaatcttt gaataaaaga aatagagtta
     1681 aaattgtaat gatgaataaa tatgaagttt caagttagta ttaacagagt agtcagcaat
     1741 aaaatataaa tatgaatatt ttaatcggct gtactctcaa gaataaattt tctatattct
     1801 tagattttaa ttacattaga ttttctttcc aagaaaattc tctgaattat ttttcaatat
     1861 ttttttcact tcttcaaatt tcgaatcaag gatttcgcct acataattaa taacacttac
     1921 aagacatgat atggaagatg atggaatgta gttgaaacaa ttcgaatatc tgactggacc
     1981 atctgtttca accaaaattt tttcttgatc cgtatttgat aacaacactt ttttgtctgg
     2041 agaatacaat agaactggac cataagacac ataaaattcc atttccatcg cttttttcaa
     2101 ttgttttctg ctacccgcaa accagtgtaa cagtctattt ttgatactat aagacggtaa
     2161 cacatgtaaa atatcatcta gtgattttct tgaatgaatt gaaataggtt tttcatattt
     2221 ttctgcaatt tctagaagat catgaaattt cttcttttgt atttcataat ctttttcatt
     2281 tcctacacaa taagtcgggt ccagtcctat ctcgccaatt ccatcgactc tatcaagatt
     2341 cgattcaact aattctttga agatgtcaag atcatctgtt aatacgtatt gtgggtgaat
     2401 accgacaaat tgtgatacta tctctccaga atttgaaaaa atgtcaaagc ttcttttggt
     2461 agtttctata ttgacggtaa cagaacatgc tttcatatcc attgatttta atgagaataa
     2521 aatattttct aaataatttg aatattcaat atcagttaaa tgaatgtgag catcaaaata
     2581 ttccatcgtt ctgtctaatt ctccaatcat atttatagaa ttattagacc taaaatagaa
     2641 gaaaatatat cataagtcaa attttattta aatatgtatt aatcaattta tatatttatt
     2701 tattattaat tattcgacgt atcagacatt atatatgtca ggtaatttta gtaattttgg
     2761 gtttacttta gtttagtatt ctgaatgtct cttcttcaat cgatgaaact ggaaacaatc
     2821 ttacttatat aaatcaacat aatctgaaag ttctaaaatt cttttatcct tcttgtgata
     2881 tgacacaaaa aataggtgga gataaaattg atatttcact gataatacct tttggcgtaa
     2941 aacgttatta tcggggaccc actgccactg aaatatagtt agaagagaaa gatgctatta
     3001 tatacaatgg gtagattttg ctgcttggct aagtaaattt gataaatcca atcttgatta
     3061 tatgaatata tgattagaac gtattaaaac ataggtagga agtaaatttt tctgaagaca
     3121 ataatttgca aaatttggat aggaacctca tatttggtta gatccaattc tagtaaaaaa
     3181 taattgagtt acattatacc aatattgttt atatcaatat accattataa ttctactttg
     3241 atgttacatg caatttcaat ttctaaagaa ttttaagatt ttttatatgt ttaaaggaac
     3301 ttgaaaagaa tgtcatatca aatagccatg aaatcgattt atataaattg aaaaaatact
     3361 ttttataaaa ttaattaaat taaattcaaa atctatgtaa catcttgcac aaaatttgat
     3421 attcgtattc caagtggaat aaacaaatgt actattccta tagtcattta taaaattttt
     3481 cctaaaccca aaatataatt tattagtaac ctgccatatc aatagatcac aaatgcccgt
     3541 tccaaattca atttattcct atggtctaat cattgctgga tcagttttta tagctatagc
     3601 aatatattca gtaatatatt ctaacacttc tgtgaaagtc gatctcgatg gaattattaa
     3661 gcctggttca caagatatac tttctccaaa tatggaaatt ggaaggaata ctgtattagg
     3721 gttatcagga tcccttttta atgtatctat tacgtttcct aataaaacat ccttcctact
     3781 gataaataat gcttctgact ttgaatatga ttttgaagct aaacaaaatg gaaagcatat
     3841 aataaaaatc tttaatcttg gaaattctga agttcttatt gacggatatg cttatactaa
     3901 gggaaatgaa attgctctag ttggtcaatt aatgttacta gtaacaggta tagtaattct
     3961 gtggatgggt ataagaattc gaagaagaaa ttaaaatatt ccttttttat aggaacctaa
     4021 taatttataa aattttgatt tcttttttat attttctaaa gttcttttta tcctttgatc
     4081 catatagtgt ccttcgaaat ctacataaaa ataatattcc caaggagtct ccttggttgg
     4141 acgggattcg attttagtca gattgatact ctctttcgca aattcattta ataccttaaa
     4201 taatgatccc ggactatgtt ctaacccaaa tattattgat gttctatcat tacctgttgg
     4261 ctttgttgtt attttttttg aaattacaaa aaacctagta aaattattct ttctatcctc
     4321 cactccttca tcaatgattt tcatctcata taattctgca gcccttttac ttgcaattgc
     4381 tgctgaatcc gtcatattgt gttctttgat catttttacc gctcctgcag tatcgtatga
     4441 agcaataggt tctagttttt tttggtagat atattctctg cattgagcaa gagcctgagg
     4501 atgtgaaaat acttttaata ttttttcacc atgtcgctga ttaacaatta aacaatggtg
     4561 aatcctttgg aaaatttcgc caactatttg tattctattt tttaatagta aatcataatt
     4621 ttcattcaca ctaccctcta tagagttttc tattgggacg acagcaagat cattttcgct
     4681 tcttacgacc gaatcaaaga cttgttgaaa agatctcatg ggtactgtaa cggagtctgg
     4741 aaaaagtgtc aaaactgcca tttcactata agctccattt tctccttgaa aagcgacttt
     4801 atgtttaatt gccaattaat attataatag aaacggatct tttatgtttg atgcatcatt
     4861 tttttatttt attttatatt atattatatt atattgaaac atttgaatat tgtctagatt
     4921 tacaataatt tgagacatct aatttgtttt aaatagcttg atttctgctg atgttaaaat
     4981 agcgtttaaa agtttttttc catattctga tctcttgtca atttttatcc tagctttttt
     5041 cccaatttga gaactaaaca aaaattcatt atccacataa attccaacat ttgcacctat
     5101 ttcttttttg ttgactatga ataatattga tgaaccagat tcattaattt gataatctac
     5161 attatttcca aggacaggag tctttgcttc aatatcgatt ttcattccta ttatttcttc
     5221 taattctgaa acagtcgctc caccttttcc tattattctt ggaatgaatt ccttgtctac
     5281 ctttattctt actttgttat tggatactat ttctatttca gcattaggat cgaatcttct
     5341 taccacatct ttgattttgg attctgctat tctcttaagt ttattatttg actctttgtt
     5401 tgatgttaat tctcttacag gcactacaat attttcttca ccgtaagtat aaatctcgta
     5461 ttctaattga cctgtttcat agtcaaaaat ttcaactaaa ggtctagcaa gatcctcttc
     5521 aaccattcct gagggaacct taacggttaa tctaaggtca tagaccttgt ttattagacc
     5581 gtcttttaaa aatattattg tatccaaaat gtgtggaatc attcccatct ctattttacc
     5641 aataaatctc tgaaccgcgt ctatgggact gttagcatga ataattccaa tcattccgac
     5701 tcctgaaagt ctcatgtctg cgaatacgtt aaaatctcta atccttctga tctcatcaaa
     5761 aatagtgtaa tctggtctaa ccagtagtaa tatatcaacc gatttttcaa aacttccttc
     5821 tagtgggcta tattgcgtaa cttcttttgg tacctgcaaa tctcttggtg attcaaacgt
     5881 ttttactatt ttaccttttt ttgtatagta ttctgcgaga ctgctggcta atgtactctt
     5941 tcctgaaccc ggcggtccag ctataactat tccttctgct ttttcatcca aacgtgtcaa
     6001 aagtttttca cttaatttgt agtcatccaa tgaaagatga actattggtc taacaatggt
     6061 aatttcgatg gcatctgaaa atggcggtcg agttatggtt attctatatg taccaaattg
     6121 aataacatta gctccttcac gatttatttc atataatttg ttagcgtcag gtggattaaa
     6181 ttcatagatc tctttgatta actccttcag aaagtcgtta tttatcgctt tttcatctaa
     6241 ctttactagc tgaaaattgc ctggacgtcc aatcttggca tacggacaaa ccccgtcttt
     6301 taagtgaaca ctcatcgttt gttccgagaa gaatttttca aatttgaatt ctttaatttt
     6361 attatttggt tttatgagaa tggattcaat tccttgtgct aaagctgcta tatgttgaac
     6421 gtaatccgca gtaatgataa ttccctcttc ttctaatgca atttgattaa taatggcatc
     6481 aatccttcca tgttttgcta atagtatgtc atcataatct ggtctttgtc ccgaaaaact
     6541 taatttaatt ttcctttttc gacattcttc ccttatctct ttaatttctt gtaaacctac
     6601 aaaaccatgt tctctatttg ttgatgcctg tgcttgtagt tcatccaata ctgcatgagg
     6661 aataatgatc tcatcatttt cgtttatttt acctgaatac aacattttgg ttatttcttt
     6721 atcgattact atacttgtgt ctaagacaaa ctttttcccc aattaattca tatttgtatt
     6781 tcatctagtg taattaagat ttattctctt gttgcgaaac atttattcat ttacctcctt
     6841 tattgtatgg ttttcatttg acagattgga taaaggttag ctagctttta gaatgttaat
     6901 taccaaaaat attgaacacc ctttgattta aaaagaaatc aactattatt tttgaaatgg
     6961 tcatactatc aaaggaaaat actaaactaa ggctggagga atttcgtata ttgttaaaat
     7021 atatgccttt tttacaaaaa aatggatttt ctgattgcgg acgtggtcaa attatgggtc
     7081 agatgttcct attgcaagaa tttcttaatg aaaaccaaac aaataatgaa gttgtaaata
     7141 tacaacaaga gaattctgtt ttaaatgatg gtttacaaga taatacttcc aacacagcat
     7201 ctcctccacc acaatattac gaaactgcac aacctatgga gtctaaatca tctaacaccg
     7261 aacccaaaaa taaaaccttt gacttggaca gtctaatttt ggaagatgaa gatacgacag
     7321 atgaagaaaa taaacttggt tctcgttggt tgagaccttt taaaaatgat gacaatggca
     7381 agaaaaaacc cctagactat tttgagaaaa atgagattac acagtcttgg aaagaaaaaa
     7441 taaggaaaat gactcaaact gatatactct aattttttaa tgtatttatt tttcatcaat
     7501 cagcattctt aatgctgatt taaattcatc atttgatagt agtggaattt ctgctatttt
     7561 gatattttcc ttaacatgct ccattttttt ctgacctaaa agtggggcta ttatccctgg
     7621 agtcgatctt attatctgaa ctaatttgaa aatttggtta gtcatatttt ctgcataatc
     7681 ggaaatattg gtttttaata atcttccttg aaaaagtgga acactagaga atactccaat
     7741 ctgtaatttc atggcagcat ctagtattgt tagatttttc tcttcgtcaa tagattggtt
     7801 cttcagaaaa agagcttcac tgtatgctaa attatatgga agttgaatga aacgaaaccc
     7861 atgtttttcc cccccaacat tcagagctaa attatgtatc tcctcaagtg ataaataatc
     7921 tttattatct ttatttacac gaaaacatgt ccaagtagcc attccataat accttattct
     7981 cttctcgttt cgaaatttct cataaacttc aaatacttta tataacattt ctaaaaattc
     8041 ctttttgcta acatcttgat tccaactttc aaaaggatta tggatataaa gaagatccac
     8101 tgttttcaat tttagattgc agatagatct ttcaacacat tttgatatgt aatttgggtt
     8161 gagaacatta tatcctgaac ttatgtctga tgctttaata actccagggg ctatatacat
     8221 tttttgcata tattgtaata catcaatttg aggaaaatct ccatcatttg taatatatcc
     8281 attctttgta ctaataaata tctcatctcg tgtgactatt ccatctttta ctaatctttg
     8341 caatgctctc cctatgctct tttccgattt cattgccctg tagttaattg cagtatctat
     8401 gacattaatt gcgccggctt tgacagattc atacagtgca tcttctatct ctttatcttc
     8461 atgtgccgat agatctccta aataagtacc cattccaata cttgatagat ataaatcgtc
     8521 aaattttttg aaatgatttt ctgcaatacc tttttttagt gaattttctc tgaatctttt
     8581 tgttccctca attgaagcaa atccttccaa ataagaattt tcatttgaca ataaactaag
     8641 tagtttttat cttcatatat ttttagttga tatttttgtt gttttcgcaa acaaaggtgt
     8701 atatgtagtc gtttcaaaat acttgacgtg aatagtaatt tgccgggtag tagtgttagt
     8761 agtggtggtt ccggtactgg cagtacaggt agtggtaata acagtaataa caataataat
     8821 aataataata gcacaagt
//
LOCUS       DATIAS010000394         3320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1841154, whole genome shotgun sequence.
ACCESSION   DATIAS010000394 DATIAS010000000
VERSION     DATIAS010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3320
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1841154"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(502..1248)
                     /locus_tag="VLA74_08005"
     CDS             complement(502..1248)
                     /locus_tag="VLA74_08005"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSF50684.1"
                     /translation="MMRPSHTFFIGSSSNNNNIHVQRRSRRRIDNSIVSNTIIHHLNI
                     SKIFYISLFCIVLLLSCFTVFLETGSNKEEGQYDDRIQMVWAEEINGTENPDNIVGTL
                     NQDTIRGFGGNDTIDGKEAGDDISGGSGDDIIYGNEGRDVLKGKAGNDRIDGGKGNDR
                     IFGDRGNDVLIGGPGNDTLTGGFGKDIFMCGEAKDTITDFNLTQKDTAPENDCENIKY
                     SDKKNIDKNNNTIAKDNDKAKNKPFFGLFG"
     gene            1887..2831
                     /locus_tag="VLA74_08010"
     CDS             1887..2831
                     /locus_tag="VLA74_08010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50685.1"
                     /translation="MRNPVFTAVLLSVLLLSGVIATSMISFIGAEASSDKQEKKKEKD
                     KKDYYDNYDKVKDVYESTDHDSYKMPMADQYSDGYQMNDYTAEADQYSDGYQMNDYTA
                     EADQYSDGYQTDGYVSEKDNQEKYKADDKGDYKNNDKKAIKKIKIIECKNTNVNGDEL
                     EDLETVETMKSENPIVKQLENKQLGNQMNEYDQYNGGVHEYYIGSDTKIIFICTNDNY
                     NLDSNNNIDTLKTPNTGSTTIETTESGDNARATVDSNDNADTIKETETTESGNATATV
                     DSNDSIDLATNEMISGQNTDSLLNMDVDTKPNYLNIMK"
BASE COUNT         1230 a          513 c          453 g         1124 t
ORIGIN      
        1 aaagtaataa aggaacttgc tttgtagtaa ctttcaaagt tgctatattt gtttcaaaac
       61 gataaataag cgactctgtc ctccaactta caaatagttt cttaatatta atgtaaataa
      121 attttattag aaacattaaa attcaaaaag tttatctctt tgttatcatc ttttacaact
      181 tatgactcaa ctaaacaatg ggattcgaaa ctagcgtgca aatcccggcc cgggcgctct
      241 tttaggttat aaagtttaat cagtatctaa aaattgcaat tttccagaaa tttcaaaaaa
      301 acaaccagat gaactttgca tttggatcca aaaagttctg taaagaatgg atcgttctgc
      361 ttcatttgtg gatttgcaac tgttctagca gcatattttg ggataccata aattaaatgg
      421 attctattgg aagtatgata ataggaggat acatattttt tatggcttat gtagccctga
      481 aggaattaac atcagttcta gtcatccaaa taaaccgaaa aagggcttat ttttggcttt
      541 atcattatct tttgcaattg tattattatt tttatcaata ttttttttat cactatattt
      601 tatattctca caatcatttt ctggagcggt atctttttgt gtgaggttaa aatcagtaat
      661 agtgtccttt gcctcgccac acatgaatat atctttacca aatccacctg ttagtgtatc
      721 atttccagga cctcctatca acacatcatt tcctctatct ccaaatattc tatcattacc
      781 ttttcctcca tctatacgat cgtttcctgc ctttcctttt aagacatctc taccttcatt
      841 tccatagatg atatcatcac cacttccacc gcttatatca tctccagcct cttttccatc
      901 tatcgtatca tttccaccaa atcctctgat agtatcttga ttcagtgtgc caacaatatt
      961 gtctgggttt tctgttccgt ttatctcctc tgcccatacc atctggattc tatcatcata
     1021 ttgtccttct tctttattag atcctgtttc caaaaataca gtaaaacatg atagtagtag
     1081 tactatacaa aacaaggata tgtaaaatat ttttgagata tttagatgat gtattatagt
     1141 atttgaaaca atcgagttat ctattcttct tctgcttctt ctttgtacat ggatattatt
     1201 attattacta ctactaccaa taaagaatgt atgacttggt ctcatcatct attataataa
     1261 taaaaagtaa aaagcgattt aaagaattgt tgcaagatac ttacataaaa aacgtgtggt
     1321 attattgtca atagaatttt atagatggat aggtagataa tttatcagtg taccgtaatc
     1381 tactatagtc aagttgttga ttgacattta caaaatagat ttttttactt acgtcatcat
     1441 aaaataattg agaatagttt tttattcaac aaattactga ttatttgaag gttataaaat
     1501 atttataatt ataattatca gcataattat cggtatgtta tcaaagcctt aacaggattg
     1561 attttcatac atctaagaat gtttcgaact gcatgaaatg aaatatacta ttcactaaat
     1621 cctccatacc ctacttattt acttcggtat ttcaattgaa gttctttaaa aatatacaat
     1681 attattttta ttttgtgtga aattcatcac aaattgtaat agtagttgta atagaattat
     1741 aattatagaa atataacacc taaaaatcaa cagacaaaat aacggtatta gaatgatcga
     1801 taacaataaa cttaagataa tgagtagagt aataacatat tataattttt agcattctaa
     1861 ataagtgtat taaatataaa tgcaatatgc gcaacccagt ctttaccgcc gtactattat
     1921 cagtgctttt attatcaggg gttatcgcca catcaatgat ctcatttatt ggtgcagagg
     1981 catcctcaga taagcaagaa aaaaagaaag aaaaagataa aaaagattat tatgacaact
     2041 acgacaaagt aaaagatgtt tatgaatcca cagatcatga ttcttacaaa atgccgatgg
     2101 cagatcaata ttctgatggt tatcaaatga atgactatac tgcagaagca gatcaatatt
     2161 ctgatggtta tcaaatgaat gactatactg cagaagcaga tcaatattct gatggttatc
     2221 aaacagatgg atatgtttct gaaaaagata atcaagaaaa atataaagct gacgacaaag
     2281 gagactataa aaataatgat aaaaaagcga ttaaaaaaat caagataatt gaatgtaaga
     2341 acaccaatgt caatggagat gaattagaag atcttgaaac cgtggaaaca atgaaatctg
     2401 aaaatcccat tgttaaacaa ttggaaaata agcaattagg gaatcaaatg aatgaatatg
     2461 atcaatataa tggaggtgtt catgaatact atattggttc agacaccaag ataatattca
     2521 tatgcactaa tgacaattat aacttagact ctaataacaa catagataca ttaaagactc
     2581 caaatacagg ttcgactaca atagaaacta cagagagtgg tgacaatgca agagcaaccg
     2641 ttgattctaa tgataatgca gataccataa aggaaacaga aactacagag agtggtaatg
     2701 caacagcaac agtggattct aatgacagca ttgatttagc aactaacgaa atgatctccg
     2761 gccaaaatac tgactcctta ttaaatatgg atgtagacac aaaaccaaat taccttaata
     2821 ttatgaaata acagtgataa tccttaattt gatttaggga tattcaatat ttttattttt
     2881 atgaaagaaa acacattata aaataatgaa tttcaaataa tttcttaatg tcatgatttt
     2941 tttagattga tataaaaaag gctttctcaa tatcatcata aactcagaga aaatactccc
     3001 cggtaaaaat atgacaatag acaacaaaag taataataca ttttataaag agatttcgaa
     3061 aatttaaaca aattaatttt attttttttc tagtattaaa aatagtatta aaaatttccc
     3121 taataaccta tgataaaatg tgctaaaaca gatcaatttt tttaacatca gaattaggat
     3181 ttcaaattaa atgatcgtac atattatcgt ttgattaaat tatagaattt ttcatctgta
     3241 actgcataga aagacagtct ggtcttcaca tcaagatcag aatctaattc ttttccgtca
     3301 atagagtaca attttccacc
//
LOCUS       DATIAS010000395         4813 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1567375, whole genome shotgun sequence.
ACCESSION   DATIAS010000395 DATIAS010000000
VERSION     DATIAS010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4813
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567375"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VLA74_08015"
     CDS             <1..252
                     /locus_tag="VLA74_08015"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSF50686.1"
                     /translation="NNNLFAFDIYCPHRGASLSKSELSCDSNRIVCYLHDFEYDIFSG
                     KLEKIPDKWADQSQEWKKSKDLTLYNVLEKDGSIFVEIP"
     gene            complement(294..599)
                     /locus_tag="VLA74_08020"
     CDS             complement(294..599)
                     /locus_tag="VLA74_08020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50687.1"
                     /translation="MLVKINNINPNKVKVTQLDIDDYGSVVPLSELELTLPPLETDDS
                     IYNILKNVQYAAVFTRQELDDENKIKDTVIILANPITLEELNAEKNRVIEGSYEKKK"
     gene            826..2019
                     /locus_tag="VLA74_08025"
     CDS             826..2019
                     /locus_tag="VLA74_08025"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSF50688.1"
                     /translation="MMSPDWNKYRDDFPVVQKYSYLNNAAISPIPKTVYQQAVKFYQD
                     SLYYGGTLWNRWEKMIEQTRELYANFIGAAGPEEIAFTHSTSEGMNIVAHMLSEKGIV
                     ILNDLEFPATNLPWINKNDGRENLKFVKARDQNKILIKDIVEMIDKTNSLSPQNVVKT
                     IVTSHVQYSTGFKQDLKQLAKISKKYGIFLVVNATQSLGCMYFNVKDFDIDFASSNGH
                     KWLLSSFGIGSLYIKGTYLQQPNQFKPAFFSQSGQRERNLYSINTQMLMSNTATKFEV
                     GSPNLPNISALNAGLQYISTIGIKNIEQRILQLTDYIIDKLHSINLKILSPIENKNNR
                     SGIILFQSKNRKPLDIIKILEKKYKIIVSARSNGIRISPHFYNNEDDIDKLVSALEKI
                     FSNSI"
     gene            2315..2530
                     /locus_tag="VLA74_08030"
     CDS             2315..2530
                     /locus_tag="VLA74_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HSF50689.1"
                     /translation="MAHVAKIIEIIGGSEKGWEDAAQVAIDEARKTIHGITGIEVVDM
                     TAKVDPTTSQITQYRACVKIAFGIEHP"
     gene            complement(3284..4783)
                     /locus_tag="VLA74_08035"
     CDS             complement(3284..4783)
                     /locus_tag="VLA74_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50690.1"
                     /translation="MSLLSEQDRMNGHEKDDHDFLFFNPLAQPFSKWYELHKRLNLFP
                     WWIRYNLGSAKEANLKNRILEVGKNLGLSTIWMNKIIRHSISEFSKKGLGFDYYGYHN
                     IYHELEATYFTLLAASGQNQYNRFDLKDIKYLFLSALFHDYDPLKSFDKPNEEEVEWF
                     IRKDKKIREWIEEEGLNIDIMMAMIHRTAYPFRGKIASGAIERMNHLFSKAGIPMEDE
                     KTRKYYHDLGWFLSVSERVAGYALGNFDRAIELARLNAHGLGWHPSLINQESVKYFSV
                     LKQEKEMLDRILNSVSEKYKQNFLENISKFKEAWIQEVEIKRSLRKNEISLIPVIEDK
                     NVKIDPKIVNSIIDIRNDLNGPLLVNNKQDFAKSLSHPDTILVTLRVKEKDTMVIGFA
                     KGGPLEQYRLRRGTNDANHGKKNTVFLESMYIRSGYWGEKGGHLLRLYFLTRSKELGY
                     EYVTGYVHRDVLLRRSDKGEPIQLVQKYDPDKLDYYRIELNRFNYDPLF"
BASE COUNT         1694 a          771 c          687 g         1661 t
ORIGIN      
        1 aacaataatt tgtttgcatt tgatatctat tgtccacata gaggcgcttc cctatcaaaa
       61 agcgaattat cctgtgactc gaataggata gtatgttatc ttcatgactt tgaatatgat
      121 attttttcgg gtaaattaga gaagataccg gacaaatggg cagaccagag ccaggaatgg
      181 aagaaatcca aggatctaac tctttacaac gtattagaaa aggatgggag tatctttgtt
      241 gagattcctt aacctcaacc tactaacaaa atagaaaaat tattaaacaa gattcatttc
      301 tttttttcat acgaaccttc tattactcga tttttttccg cattaagttc ttctagtgtg
      361 atcgggtttg caagtattat tacagtatct ttgattttat tctcatcatc aagttcttgt
      421 cttgtaaata ccgcagcata ttgtacgttt tttaaaatat tatatatgga atcatctgtt
      481 tctaagggcg gtaaggttaa ttccaattcg cttaagggta ctacagatcc atagtcgtca
      541 atatctagtt gtgtaacttt taccttattg ggattaatgt tgttaatttt tactaacata
      601 tcataatata atagaaacat gtaattacgt atttcctaaa gatatccgat ttcattcttt
      661 taatttttat attttatatt tttacgaatg aaattagatt tgatttaata aaccagaaag
      721 gatattttct ataatcgcca aaattattgg caaatctgtt tcaattaagg atgcttttat
      781 cgtcacagtc ttaatattta taatgttagt gtggtgcatt tacaaatgat gtcccccgat
      841 tggaataaat atagagatga ttttccggtt gtacagaaat atagctatct taacaatgca
      901 gctatatcac ctatacctaa aacagtatac cagcaggcag taaaatttta tcaagattca
      961 ctttactatg gtggtacact ttggaataga tgggaaaaga tgatagagca aactcgtgaa
     1021 ctctatgcta attttattgg agctgcaggc cctgaagaga ttgcatttac acattcaaca
     1081 agtgaaggga tgaatattgt tgctcatatg ctttcagaaa aaggaatagt catcttaaat
     1141 gatttggagt ttcctgcaac aaaccttcct tggattaaca aaaatgatgg cagagaaaat
     1201 ctaaaatttg ttaaggcaag agatcaaaat aagatactaa taaaagatat agtggaaatg
     1261 atagacaaga caaattcttt aagtcctcaa aacgtcgtta aaactattgt tacaagtcat
     1321 gttcaatatt ctactggttt caaacaagat ttaaagcagc ttgcaaagat ttcaaaaaaa
     1381 tacggtattt tccttgtagt caatgctact cagtctttgg gatgcatgta ttttaatgtg
     1441 aaagattttg acattgattt cgcttcctcc aatggtcata aatggttatt gtcttctttt
     1501 ggtataggat cgctatacat aaaaggaaca tatttacaac aaccaaatca attcaaaccc
     1561 gcattcttta gtcaatctgg ccaaagggaa aggaatctat atagcattaa cactcaaatg
     1621 ttaatgtcaa atacagcaac aaaatttgag gtaggatctc caaacttacc gaatataagt
     1681 gcattaaacg cgggattaca atatatttca acaattggaa tcaaaaatat agagcaaaga
     1741 atattgcagt taactgacta tattattgat aaacttcatt ccattaattt gaaaattctt
     1801 tcaccaattg aaaataaaaa taatagatcc ggaataatac tatttcaatc caaaaataga
     1861 aaacctttgg acataataaa aatattagaa aagaaatata agataattgt ctcagctcgt
     1921 agtaatggta ttcgtatatc tcctcatttc tataacaatg aagatgatat tgataaatta
     1981 gtctctgctt tggagaaaat cttttctaac tcaatttgag gtccaaaata tgataaagtg
     2041 tttagatata gatacataaa taaacaatac actattatca aaaacctatg atataatata
     2101 gtcatatgtt cggtattttg aatataaata ttaataaaaa aagtattcat tgcacgcttt
     2161 cccatttatt gatttattta gttatacgtg gaatttatta ttgcatggac acttaaactt
     2221 gtaagataaa tagatttatt tatattcatt tttgacaatt aattttttaa taaataataa
     2281 acttttatac cgagaaaaat atatacctaa tgatatggca cacgttgcaa aaataatcga
     2341 gattattggt ggttcagaaa aaggatggga agatgcagca caagtcgcta ttgatgaagc
     2401 acgaaaaaca atacatggaa taacgggaat agaggtagta gatatgacag cgaaagtaga
     2461 tcctactact agccaaataa cacaatatcg tgcttgtgta aaaattgcat ttggcatcga
     2521 acatccttga agaattaact tcaactactt ttttttattt atcggcaatt atttcccaga
     2581 tgttatttat gaaccaatta aattatctta ttgtttttga agatcatttc tttaattatt
     2641 tatctagata aaagtagatc tctatttcat ttttaaaact gtctattcat ctttctattc
     2701 aataatttaa aacaggctgc aggtcaaata tccagaatta aaatatattt gtgaaaataa
     2761 taaaacatgt aaatctatca caaataaaga agtaaatcaa gatgattaaa ttttataaaa
     2821 tcagagcaat aaaatttgtg caaaaataac tgacactagc tctgttaata ttgaattctt
     2881 aaagatgtta atatctaatt aattaagatt agaacaacta tgcatataat tcggaaactc
     2941 gatcaattac atatctacat aaaaaaaacc aaatcttttt acactctcac aataaaatgt
     3001 acaatgcaat aaagtaagct aataaataaa ttggagtatt gaatttttag caggttaatc
     3061 aactattcaa aatgaatcat ctgaaattgt ttctaattta tctgatcatt gtaggatctg
     3121 atttataaaa aataaataaa taaaaaaatt tgagtaccaa ataacataat tatattaaaa
     3181 taccatcttt aagtggtgta taacttccct aattctagat cttttctaaa taaaaaatct
     3241 acaaatgtac tgatattatt ttgaaaaaaa aattgtaacc ttactaaaag agaggatcat
     3301 aattaaatcg gtttaattca attctatagt aatctagctt atcaggatcg tatttttgga
     3361 ctagttgaat gggttctcct ttgtcacttc tacgtaataa aacatcgcgg tgaacatatc
     3421 cggtaacata ttcatatccg agttctttgg atcgggttaa aaaatacaat cgaagtaaat
     3481 ggcccccttt ttcaccccag tatcccgatc gaatatacat cgattctaaa aataccgtat
     3541 ttttctttcc atgatttgca tcatttgtac ctctgcgtaa ccggtattgt tctagtggtc
     3601 caccttttgc aaaacctatt accattgtat ccttctcttt tactcttaga gtaacaagga
     3661 tagtatcagg atgtgataag gatttagcaa aatcttgctt gttatttact aataatggac
     3721 cgttgagatc atttcgaata tctattatag aattaacaat ctttgggtca attttcacat
     3781 ttttatcctc tatgacggga attaaactaa tctcattttt tctcaatgat ctcttaattt
     3841 cgacttcttg tatccatgct tctttaaatt ttgaaatatt ttcgaggaaa ttttgtttat
     3901 atttttcaga gactgaattt aatattctat ctaacatttc tttttcttgt tttaatacac
     3961 taaagtactt aacagactct tgattaataa gagaaggatg ccaaccaagc ccatgagcat
     4021 tcagtctagc tagttcaatc gcgcggtcaa aattgcctaa tgcataaccc gcaacacgtt
     4081 cagagactga aagaaaccaa cccaaatcat gataatattt tcttgttttt tcatcctcca
     4141 ttgggatccc agctttagag aataagtgat tcatcctttc gattgcaccc gatgctatct
     4201 tgcctctaaa gggatacgct gtcctatgaa tcatagccat catgatatca atgtttaatc
     4261 cttcttcctc tatccattct cttatttttt tatcttttct tataaaccat tcaacttcct
     4321 cttcatttgg tttatcaaaa ctcttcaacg gatcataatc atgaaaaagc gctgataaaa
     4381 acaagtattt gatatctttt aagtcaaatc tattatattg attttggccg ctcgctgcaa
     4441 gcaatgtaaa gtacgtcgcc tctaactcat gataaatatt gtgataacca taatagtcaa
     4501 atcctagacc tttcttagaa aattcagata ttgaatgtct tatgatctta ttcatccaaa
     4561 tagtcgagag gcctaaattt ttaccgactt ctaagattct gttctttaga ttcgcctcct
     4621 tagcagatcc aagattatat cttatccacc agggaaacaa gttaagacgt ttatgcaatt
     4681 cataccattt agagaaaggt tgagcaagag gattaaagaa aaggaaatca tgatcatctt
     4741 tctcatgccc attcatacga tcttgttctg ataacaaact catcccatcc tccgtcgaca
     4801 attatcctta tac
//
LOCUS       DATIAS010000396         6041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_69761, whole genome shotgun sequence.
ACCESSION   DATIAS010000396 DATIAS010000000
VERSION     DATIAS010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6041
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69761"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VLA74_08040"
     CDS             complement(<1..293)
                     /locus_tag="VLA74_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50691.1"
                     /translation="MTRGYDLIKNAPNFLEHTGFLTLRSFISVVMDFASIAEPVSASQ
                     DEEVWVEIQSYRDSEHLDEFIANMRKIRVVANPFTSSIYLPSLPDLVLLWRIYS"
     gene            complement(1065..1355)
                     /locus_tag="VLA74_08045"
     CDS             complement(1065..1355)
                     /locus_tag="VLA74_08045"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSF50692.1"
                     /translation="MGPLVYGYTMNIGPNGRPQIREFGNIRSPLNFSHQPAILVEREP
                     LVQIDTTDKEVKITVEMPGVSKEKIRINTYDKYVEIKSEDPNRKYYKTIEVP"
     gene            complement(1430..1588)
                     /locus_tag="VLA74_08050"
     CDS             complement(1430..1588)
                     /locus_tag="VLA74_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50693.1"
                     /translation="MSTPFDIIPNDWFRRFFPRSLADLFPSERDFSDIFRDIYSIRNE
                     IERGFQNS"
     gene            2070..2231
                     /locus_tag="VLA74_08055"
     CDS             2070..2231
                     /locus_tag="VLA74_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50694.1"
                     /translation="MSVSTDNPNSRIGHKKISINDIKDNDIEDDIKKFVIKNLKKSKD
                     LYKYGKLEI"
     gene            complement(2352..2864)
                     /locus_tag="VLA74_08060"
     CDS             complement(2352..2864)
                     /locus_tag="VLA74_08060"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSF50695.1"
                     /translation="MASPQRSRKNTDMERKKEMMIRRPFDELFDNFRQDIEDTFFGPL
                     FQPLQDFRIPRMTESVETRIPLCDILDKGDKYLISLEVPGIQKDKIEIKATNEYITIS
                     GVEEAKTEKQEERYLLNERGYRSFFRRIHLEEDIIPTKVDATVEDGILKIELPKQKPT
                     STEETQIKIR"
     gene            3025..4686
                     /gene="thsB"
                     /locus_tag="VLA74_08065"
     CDS             3025..4686
                     /gene="thsB"
                     /locus_tag="VLA74_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HSF50696.1"
                     /translation="MKVSSQVPIVLLKEGSTETKDKNAQRNNINAAKLVSEMVKSSLG
                     PRGMDKMLVDSLGDVTITNDGATILKQIDVEHPAAKMMVEVTKSVDNEVGDGTTSVVV
                     LAGSLLEKAEELIGKNVHPTIIVGGYRKSAEKAVQLLKENANKIDPKNKENLKKIATT
                     SMASKLTSSYSSELSDIVVDAVLSVLENIGENTEKFKVDIDNIKVEKKIGKSIKDTTL
                     IRGIVLNKEVVHGGMPKQIESAKIVLLNCPLEIEKTEFDAKININNPEQIQRFIDEEN
                     TMLKSMVDKISAIQANVVLCQKGIDEMAQHYLAKAGILAVRRIKESDMYKLSKATGGR
                     PVTNLNDLTTEDLGYAKLVQEKSIDTDKWVFIENCKNPKSVTILIRGGSQRVIDEVDR
                     SIHDALMSVKDVVEYPYIIAGGGAPESFISYKLREWSNKLNGREQLSAEKFIEALESI
                     PLALAENAGMDPIDSQVQLREKVSSTNKPKYGIDVINGKISDLSVKEIFEPLAVKEQV
                     INAATEASSMILRIDDVIASGKSNVHSGPPTAGGMGGGMNSMHDM"
     gene            4785..5525
                     /locus_tag="VLA74_08070"
     CDS             4785..5525
                     /locus_tag="VLA74_08070"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HSF50697.1"
                     /translation="MKAEIKNIQNSGNIDLILDILGNSTRRKILLLLSKEPLYFNQLA
                     KIIGIGQQAILRHMKLLEDSKLVETYIEESDLGGPDRKYYKLVATFTMNMTFSKDGLF
                     FTNNMIKESRYKESKKLYKEYEKSILQYNNIKNKNFHKIGLLLDLFKNTLTEIENEIS
                     IYENKANDLHALRQVILHNIHEIGKDNFEFLERHIIYSLMDKLSPTSISELTDDLNES
                     ETKIKNSIKKLTDKFQEDKTSIFESLKN"
BASE COUNT         2237 a          830 c          903 g         2071 t
ORIGIN      
        1 gagtaaatcc tccataatag tacgagatcc gggagtgatg ggagatatat actgctggta
       61 aagggattcg ccaccactct tatctttctc atatttgcta tgaactcatc tagatgctcg
      121 ctgtctctgt aggattgtat ctccacccaa acctcctcgt cttgactagc agaaacaggt
      181 tctgctatgc tggcaaagtc cattactact gagataaagg acctcaaagt taagaatcct
      241 gtgtgttcta aaaaattcgg tgcattcttt attaagtcgt accctctcgt catggttctt
      301 cttaggtgct caataaataa agacttggac aatatttaca ttgtccactt ttcttttctg
      361 ttatatccta tttattcatg aataatatta tacaaaatac agtttttaaa tatgcaagga
      421 agtaaaagta ttctcagctg caatctatca aagatgatag aaatcaaata atagtaatga
      481 caacgataca gatagtgatt ccatcacagt atagttagtt tattgtattt gctataaaga
      541 gataattgtc acatataacc ttcagattaa taagagtaaa aacagtgaat taatttttaa
      601 taccaatttg ttctgtgggt atttagattt cgttttaaac tgtaacgtat ttgtctattt
      661 atttcactat tttctattca aaaatctata taattatatg taaccggtct tttgggtaat
      721 taagtttaag ctatgttcct cctatgaatg atattcctca tacgattatt aaattatcta
      781 ctaatacaaa taattatttt aaatttgttt gatatattta tctatattaa gcagatccaa
      841 taattatgtt gtaatttatc gttgaaatct ctaatcgtta aaaaaataat tatattactt
      901 aaaattataa cgtaatattt tttattgaat gtctattctt tgttctacaa tcaagatcat
      961 tcaatgttta tattttttct ttttttactc tgttctgttt tcttaaatat tatttcaaga
     1021 attccattat tgtatttaga tttaccactt tcaatatcga tatcttatgg aacttctata
     1081 gttttatagt attttctatt gggatcttcg ctttttattt ctacatactt atcataagta
     1141 ttgattctta tcttttcttt actaactcca ggcatttcca ccgtaatctt gacttcttta
     1201 tctgttgtat ctatctgtac aaggggctct ctttcaacta atattgcagg ctgatgggaa
     1261 aaattcaaag gagatctaat atttccgaat tcccttattt gtggtctacc attaggtcca
     1321 atgttcatag tatatccata tactaaaggt cccatctctc taaccttcga gccctctgga
     1381 gtttcatatt ctctaactag atcttttggt acctttgatt ctatagcttt taactgttct
     1441 gaaaacctct ttctatttca tttcttatag aataaatatc tctgaaaata tcgctgaaat
     1501 ccctttcact tggaaataag tcagctaaac ttctaggaaa aaatctccta aaccaatcat
     1561 ttgggataat atcaaatggt gtactcataa gacattattc gaataagtaa aatatatgtg
     1621 ttactcactt attgtgtgta tatttatatt tctgtatagt aaaatattat tagtgatcta
     1681 aaattattat tattgataga tgatgagaaa tatattttta atgtaaatag ctttaaaaat
     1741 aaacttaact gggatttcca tgcttcaaaa gataccaaga tttataaaaa tatattatct
     1801 accaaaaaac atacattagt agaaagtcat aactaatttt attttccaat aaataagtgc
     1861 catgaatgtt tgtataaaat ctgctttttg aataatttga atatatatcc atcatacaag
     1921 aatatacacg aacataattt gcgcctaaaa gtatagttta ataaatgaat ttagaaagat
     1981 ccaaacatct agatcttaat attagtcata atatgtgagt aagatataaa taatggatca
     2041 tcgatctatt taaacaggtg atcttcaaat tgtcagtatc taccgacaat cccaatagta
     2101 gaatcggaca caaaaaaatt tctatcaatg atatcaaaga taacgatatt gaagatgata
     2161 taaaaaaatt tgtaattaaa aatttgaaaa aatctaaaga tttgtataaa tatggaaagc
     2221 tggaaattta atcttttgta ataattttat ctgctatgcc aataatacgt ggttttgtac
     2281 atgcaattta ttacaataaa ttataagtat atggtgttca aaaaaataca aaataaaaaa
     2341 gggcttctaa atcatcttat ctttatctga gtttcttcag tagaagtggg tttttgttta
     2401 ggcaattcga tttttaaaat accatcttct acagtagcat caactttagt aggtatgata
     2461 tcttcttcaa gatgtatcct tctaaaaaac gatctgtatc ctcgttcatt taaaagatat
     2521 ctttcttctt gcttttccgt ttttgcctct tctactccag aaattgtgat atattcattt
     2581 gttgctttaa tttctatttt gtctttttgt atcccaggta cttctaaaga aattaaatat
     2641 ttgtcacctt tatctagaat gtcacataat ggtatacgag tttcaactga ttcagtcata
     2701 cgaggtattc taaaatcttg tagtggttgg aacaaaggac caaaaaaagt gtcttctata
     2761 tcttgtctaa agttatcaaa gagctcatca aatggtcttc ttatcatcat ttccttcttt
     2821 ctttccatgt cagtattttt tcgagatctt tgaggtgatg ccatctatta tcactaacat
     2881 tagctaataa gaagtatata tttattactc acaaaaagtg tgtaattata aaaatatgaa
     2941 tgggaaatat ctcattgtgt tttcaattgt tttagcaaag tatataaaat actcaaatac
     3001 gtaatgtgag taacaagagg tgtaatgaaa gtgtcatctc aagttccaat tgtattatta
     3061 aaagagggaa gtacagaaac aaaagacaaa aatgcacaaa gaaataatat taatgcagcc
     3121 aaacttgtgt cagagatggt gaaatctagt ttgggaccgc gtggaatgga caaaatgttg
     3181 gtagattctc taggagatgt aacaattaca aatgatggag caacaattct gaaacagatc
     3241 gatgttgaac atcctgcagc aaaaatgatg gtcgaggtta caaaaagtgt agacaacgag
     3301 gttggagacg gtacaacttc cgttgttgtt ttggcaggtt cactcttgga aaaagctgaa
     3361 gaattaatag gcaaaaatgt ccatccaact ataattgtag gtggctatag aaaaagtgcc
     3421 gaaaaagcag tgcaactatt aaaagaaaat gcgaacaaga ttgatcccaa aaataaagaa
     3481 aatctaaaaa agattgctac caccagtatg gcatccaaac ttacctcatc ttactcttca
     3541 gaattatctg acatagtagt ggatgcggta ttatctgttt tagaaaatat tggtgaaaac
     3601 actgaaaagt tcaaagtaga tattgataac ataaaggttg aaaagaaaat aggaaagtca
     3661 attaaagata caacgctcat tagaggaatc gttcttaaca aagaagttgt tcatggtggg
     3721 atgcctaagc aaattgaaag tgccaagatt gttttactta attgtccatt agaaatagaa
     3781 aaaactgaat ttgatgccaa aataaatata aataatccag aacaaattca gagatttatt
     3841 gacgaagaaa atacaatgtt aaaatcaatg gttgataaga tttcagcaat acaagcgaat
     3901 gttgttttat gtcaaaaagg cattgatgaa atggcacaac attatttggc taaagcagga
     3961 atattagctg ttagaaggat taaagagagt gatatgtaca aattatctaa ggcaacggga
     4021 ggaagaccag ttactaatct caacgatctc actactgaag atctcggata tgctaaattg
     4081 gtccaagaaa aaagtatcga taccgataaa tgggttttca ttgaaaattg taaaaatcca
     4141 aaatctgtaa caatattaat tcgaggtgga tctcaaagag ttatagatga agtggataga
     4201 tccatacatg atgctcttat gtctgtaaaa gacgtggtag aatatccata tattatagca
     4261 ggaggtggtg cacctgaatc attcatatcc tataaacttc gagaatggtc caacaagtta
     4321 aatgggagag aacaattatc tgcagaaaaa ttcattgaag cacttgaatc aatcccactt
     4381 gcattggctg aaaatgcagg aatggatcca atcgatagcc aggttcaact acgagaaaaa
     4441 gtttcatcta ccaataaacc aaaatatggt atcgatgtaa taaatggaaa gatttccgat
     4501 ttatcagtaa aagaaatatt cgagccactt gcagtaaaag aacaagttat taatgctgct
     4561 acagaagcat catctatgat ccttagaatt gatgatgtca ttgcttcggg taaatctaat
     4621 gtacattccg gtccaccaac tgctggaggt atgggaggag gaatgaacag tatgcatgat
     4681 atgtaaaaac caaaactcat ctcaatcttt ttgttaaata ttataagaat acgctttgat
     4741 aatatatata tgaaaattat taatattttg ttaggttttg taaattgaaa gcagaaataa
     4801 aaaatattca gaattctgga aatatagatc taattttaga tattttggga aattcaacaa
     4861 gaagaaaaat tttattatta ctttcaaagg aaccattata ttttaatcag ctagcaaaaa
     4921 tcattggaat aggacaacag gctattctgc gtcatatgaa attgttagaa gattctaaat
     4981 tagtagaaac atatatagaa gaaagtgatc ttggtggacc agatagaaaa tattataaac
     5041 ttgtcgcaac ttttactatg aacatgactt tttctaaaga cggacttttt ttcacgaata
     5101 acatgatcaa ggaatcaaga tataaagaat ccaaaaaatt atacaaagaa tatgaaaaat
     5161 ctattttaca atataataat ataaagaata aaaattttca taaaataggt ttgttgctgg
     5221 atttattcaa aaatacacta actgagatcg aaaacgaaat atcgatctat gaaaataaag
     5281 ctaacgatct tcatgcatta agacaagtta ttcttcataa tattcatgaa attggaaaag
     5341 ataattttga attcttggaa agacatataa tatattcact tatggataaa ctttcaccta
     5401 cttctatttc agaattaact gatgatctaa atgagagtga aactaagatc aaaaattcta
     5461 ttaaaaaact tacagataaa tttcaggaag ataaaacttc aattttcgaa agtttaaaaa
     5521 attagaaatt agaaaaatat attcatatta taaaatagtt tatttttata ttctgatcta
     5581 aaatgaaata tttatttatt aacttagttt ttttgaagtt tattggaaca tgcgatattt
     5641 cctaatattc aaaatatgat gacttttctg atatttaatt tcgaatagaa attacaaaat
     5701 caaatgatac tataatagat tgtaataaat tacggataag aaaattcatt gacgaagatc
     5761 agtacaaact cgtttaatat ttagaatttg gtaaccattc taattatata gataatatat
     5821 acaataaacc ttaatgtcga taaagatgac tttagaaaat gattatctta agagaatata
     5881 ttcattattg aaaaaatgaa attttaaatt gtcattgata aataaaataa tttaaaaaat
     5941 ttataattta aaaaatgtta gaatataaca ataaaaaaat gaaggattta tttgttgtaa
     6001 ggtctttcta attttctgat atagttgaag taatttcgag t
//
LOCUS       DATIAS010000397         2091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1978472, whole genome shotgun sequence.
ACCESSION   DATIAS010000397 DATIAS010000000
VERSION     DATIAS010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1978472"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /gene="leuC"
                     /locus_tag="VLA74_08075"
     CDS             complement(<1..1199)
                     /gene="leuC"
                     /locus_tag="VLA74_08075"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HSF50698.1"
                     /translation="MSNTLFEKIWNNHIVYPNSKSINESINPDSYLLYIDRHLIHEVT
                     SPQAFDGLRTNNRKVRRPDLTFATMDHNVPTTNRTLPIVDQISATQINTLIENCKEFG
                     IRLFDLKSPNQGIVHVIGPELGITLPGTTIVCGDSHTSTHGAFGAFAFGIGTSEVEHV
                     LATQCLWLTKPKTMKINFIDEPKNLLAVSAKDIILALIRKIGIGGGIGAVVEYSGDII
                     KKFSMEKRMTICNMSIEAGARAGLIAPDDVTFEYIRNREYSPKGEQFEKMVRYWKENL
                     KTDNNAIFDKKVEVNISDLSPQVSWGTNPSMVVDVTGIIPYPDEYAMGNEGEKKAATR
                     ALEYMNLKSGTPVTDICIDRVFIGSCTNSRLEDLLEASVIVKGRKVSPKVHAMVVPGS
                     QSVKLQA"
     gene            1298..1957
                     /gene="psmB"
                     /locus_tag="VLA74_08080"
     CDS             1298..1957
                     /gene="psmB"
                     /locus_tag="VLA74_08080"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000502 - proteasome complex [Evidence
                     IEA];
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal proteasome endopeptidase complex
                     subunit beta"
                     /protein_id="HSF50699.1"
                     /translation="MHVQDNRYSEYIANQIKKGTTTCALSCSDGVVLAADTRASAGFF
                     IADRRVMKIQKVDNHLGMTIAGGVADAQNLVDTMRYNANIYRISNKRIMPVQSAARLC
                     SNILFNQRYFPYYVQIIMAGYEGKGAGQIYNIDLFGSLTEEKFISTGSGSPVAYGYLE
                     GEFKENMNVNEAYKVALQAIAAAIRRNAGTGDGINVVIIDKNGYRELSKEVKDAVKVV
                     F"
BASE COUNT          706 a          318 c          329 g          738 t
ORIGIN      
        1 tctgcttgta acttgactga ttgagatcct ggtacaacca tagcatgaac ttttggtgaa
       61 acttttcttc ctttgacaat aacagatgct tcaagtagat cttctaatct agaatttgta
      121 catgaaccta taaacactcg atcaatgcat atatcagtaa ctggagtacc tgattttaaa
      181 ttcatatatt caagcgctcg agttgccgct tttttttcac cttcattacc catagcatat
      241 tcatctggat atggaattat accagttaca tcaacaacca ttgaaggatt tgttccccaa
      301 ctcacttgtg gagaaagatc tgatatattt acttctactt ttttatcgaa aatagcatta
      361 ttatcagtct tcaaattttc tttccaatat ctaaccattt tttcaaattg ttctccctta
      421 ggggaatatt ctcgattacg tatgtattca aaggttacat catcaggagc aattaatcca
      481 gctctagcac cagcttctat tgacatgtta caaatagtca ttcttttttc cattgaaaat
      541 ttctttataa tatcgccgct gtattcaact actgctccaa tacctcctcc aatacctatt
      601 ttgcgaatga gtgctaatat aatatcttta gctgatactg caagtaaatt ttttggttca
      661 tcaataaaat ttattttcat agtttttggt ttagttagcc ataggcattg agttgcaagc
      721 acatgctcta cttcactagt accaattccg aaagcaaagg ctccaaaagc tccgtgagta
      781 gaagtatggc tatccccaca aactatagta gtacctggaa gagttattcc tagttcaggg
      841 cctattacat gaacaatacc ttgattagga cttttcaaat caaataaacg tataccaaat
      901 tctttacaat tttctattag cgtattaatc tgtgtagcag atatttgatc aactattgga
      961 agagttctat ttgtagttgg aacattatga tccatggttg caaaagtcaa atcaggtctt
     1021 ctgacttttc tattgtttgt tcttagacca tcaaatgctt gcggtgaggt aacttcatga
     1081 atcaaatgcc gatctatata tagtaaatag gaatcaggat ttattgactc atttatactt
     1141 ttagaattag gatatactat atgattattc caaatttttt caaacaaagt atttgacatt
     1201 atattatata ttgtgtatta gtaaaatata attatatata acatactaag aatgaaaaaa
     1261 tacttatgta gtattgaatt gactatcttt gattaagatg cacgtacaag ataatagata
     1321 ttctgagtac atagcaaatc agattaaaaa aggaacaact acttgtgctc tttcatgctc
     1381 tgacggtgtt gttttggctg ctgatacccg tgcaagtgca ggttttttta tagctgatag
     1441 acgagtaatg aaaattcaaa aagtagataa tcatttagga atgactattg caggcggtgt
     1501 agcggatgct cagaatcttg tagatacaat gcgatataat gccaatatat atagaatatc
     1561 taacaaaaga atcatgccag ttcaatctgc agctagatta tgttctaata ttttgtttaa
     1621 tcaaagatat tttccatatt atgttcagat tatcatggca ggatatgaag gtaagggagc
     1681 cggtcaaatt tataatattg atttatttgg atcattaact gaagaaaagt ttatttctac
     1741 aggtagtgga tcccctgtag cttatggtta tttagaaggt gaatttaaag aaaatatgaa
     1801 tgtaaatgaa gcatataaag tagctttgca ggcaatagct gcagcaatta gaagaaatgc
     1861 tggcacagga gatggaataa acgtagtcat aatagataaa aatggctata gagaattatc
     1921 aaaggaagta aaagatgctg taaaagtagt attttaaaaa ttaaatccat tattattaag
     1981 aataataata ttattatttc ttaatttttg aattaaaaaa aattaaatta aaagttaact
     2041 attacctatt ttttatttgc aattttagaa tttataaatt ctttatatat t
//
LOCUS       DATIAS010000398         3010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_343666, whole genome shotgun sequence.
ACCESSION   DATIAS010000398 DATIAS010000000
VERSION     DATIAS010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343666"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(201..335)
                     /locus_tag="VLA74_08085"
     CDS             complement(201..335)
                     /locus_tag="VLA74_08085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50700.1"
                     /translation="MVEELLIYNPLIDRNEAIKILKRDNPETLKIFAISDLRRYISTK
                     "
     gene            complement(434..625)
                     /locus_tag="VLA74_08090"
     CDS             complement(434..625)
                     /locus_tag="VLA74_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50701.1"
                     /translation="MEISKPIIIKTWKGNGNGSILATIPIKIAKQYNLEEPSHLVLEQ
                     HQDGIFLKKLELSKGSIQN"
     gene            667..1320
                     /locus_tag="VLA74_08095"
     CDS             667..1320
                     /locus_tag="VLA74_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50702.1"
                     /translation="MVSNNKQNNDDITKNSYVYSDTLRNLLKDQLRYFQLVEGWQKRK
                     VAGEGDIPKEEKVKLNKTKKYLDRRKVDVLNNHIFRSMANLIVFFDNLAEHPELRDVY
                     EEDVKELLGFSGQNAKEYEDNIVTRLLQSILKWDTNMDPNNFRLELISSIQNVLYNKI
                     LYLTVMDENLGDSVTNTIVNPDVGRALIWCRMFSARYRNSEKKREDQAREPNRPINF"
     gene            complement(1373..2797)
                     /locus_tag="VLA74_08100"
     CDS             complement(1373..2797)
                     /locus_tag="VLA74_08100"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HSF50703.1"
                     /translation="MSKDPAQQQVNTTTFEQKNISLTKFIKNVSIRNKNTAKQYHLRL
                     SSFAKFIKEKYNNKIDVDELLQKLKDKDLDPYDVLNDYCIFLQSNYNNVGPITFRDKI
                     TTVKTFFEFNDIEISPRKFKLKVRYPKKVLRHKEAIDKEDIVKILNGCSDLRLKTYVM
                     LLASTGLRATEALSIRLKDLDLESNPAKLIIRGEFTKTKVDRYVFLTKEVVQQVKLWI
                     DYKYRKRRICYYDKKEEEEEKKTITEYRTPEKNQNELIFSLNQTDKPRPEILYSNLAP
                     DFAKTLDRIGMGSREDGNEIRRKITLHSFRRYVKTTISDLGYADYSEWFIGHAGSTYW
                     RKKDSEKAEIFKKIEPYLTFISIPQLERQGADLQTKIEELQDINQLLRNKHNEKEEQI
                     KKLEESVAFLADKFNAFLLSQPGNRIVYYDDDNNKNNNTNPRDLKGIELKPEINNKTV
                     GEVVIPSSTFSNNNSRNNNNKKKK"
BASE COUNT          985 a          430 c          425 g         1170 t
ORIGIN      
        1 taattctaat cctgtaaagg atctaaacaa taatggcttt ttagatagtt tatcataatt
       61 tagcaaattt atgaggattt atggcaaaat agaggaatat agctgtaagc tttctaatta
      121 tgcaaaggat ctattattaa tataggtagt atcagtaatc gcttcgggat cggttattaa
      181 cttctttact tcttttttat tcattttgtt gaaatgtatc tccttaaatc actaattgca
      241 aagattttca aagtttcagg attgtctctt tttaggattt ttattgcttc attacgatct
      301 attaacggat tgtatattaa aagttcctct accatcctac taatcctctg gattatctct
      361 tcaaaattga aataccaatg taaccaacaa ttatctacta ttgatttatt ttctcgatat
      421 ataggactaa aaatcaattt tgtatacttc ctttcgacaa ttctaacttt tttaaaaaaa
      481 ttccatcttg atgttgttct agaactaaat gagaaggttc ttctaaattg tattgttttg
      541 caattttaat aggaattgtt gctaaaatag acccatttcc atttcctttc cacgttttga
      601 ttatgattgg tttgcttatt tccatgatag cgatagatat aataaatagg gtaactataa
      661 ggttttatgg tttcgaataa caagcagaat aatgacgata tcactaaaaa tagttacgta
      721 tattctgata cgttgaggaa tttattgaaa gatcagttac gatattttca attggttgaa
      781 ggatggcaaa aaagaaaagt agcgggagaa ggagacatac caaaagaaga aaaagtaaaa
      841 ctaaataaaa cgaaaaaata tttagatcgc agaaaagtag atgttttaaa taatcatatt
      901 tttcgttcta tggctaattt aatagtattt tttgacaatt tagcagaaca tccagaatta
      961 agagatgtat atgaagagga tgtaaaggaa ctattgggtt ttagtggtca aaatgcaaaa
     1021 gaatatgaag ataacatagt aacaagactt ttacaatcta tactaaaatg ggatacaaat
     1081 atggatccaa ataactttcg tttagaatta atttcatcaa tacaaaatgt cctatataat
     1141 aaaattttat acttaactgt aatggatgaa aatcttggcg attcagtaac caatacaatt
     1201 gttaatccag atgttggtag agcacttata tggtgtagga tgttttctgc aagatacaga
     1261 aactctgaaa aaaagagaga agaccaagca agagagccaa accgtccaat aaatttttaa
     1321 attaatatta tcaaatagat acaaaaatag tatcaattag atttttagca aattactttt
     1381 ttttcttatt attattgttt ctgctattgt tgttactaaa cgtagaagaa ggaattacga
     1441 cttccccaac tgtcttattg ttgatttctg gctttaattc aattcctttc agatctcttg
     1501 gatttgtgtt attatttttg ttgttatcat catcatagta aacaattcta ttcccaggct
     1561 gacttaataa aaatgcatta aatttatcgg ctaaaaatgc aacagattct tctaattttt
     1621 taatctgctc ttctttttca ttatgcttgt ttcttaatag ttgatttata tcctgtaatt
     1681 cttctatttt ggtttgcaag tctgctccct gtctttccaa ctgtggaata cttataaaag
     1741 tcaaatatgg ctcaatcttt ttgaatatct ctgccttttc gctatctttc tttctccagt
     1801 aggtagaacc ggcatgacca atgaaccatt cagaatagtc tgcataacca agatcagata
     1861 ttgtagtttt tacataacgc cgaaacgaat gtaatgttat ttttcttctg atttcatttc
     1921 catcttccct tgaacccatt ccgattctat ctaaagtttt tgcaaaatcc ggggctaaat
     1981 tactatataa tatttcaggt cttggtttat ctgtttgatt tagagagaag attagttcat
     2041 tttgattctt ttctggagtt ctgtattctg ttatagtttt tttttcttct tcttcttctt
     2101 ttttatcata ataacaaatt cttcgctttc tgtatttgta atcaatccat agttttactt
     2161 gctgaacaac ttcctttgtt aaaaatacgt atctatcaac ttttgttttt gtgaattctc
     2221 ccctgataat taatttagca ggatttgatt caagatctaa atcttttaac ctgatagaca
     2281 acgcttctgt tgctcttaaa ccagttgatg ctagtaacat aacataagtc tttaatcgca
     2341 aatcagaaca accattcaaa atttttacaa tgtcttcctt gtcgattgct tctttatgtc
     2401 ttaatacttt ttttggatat cttaccttta atttgaattt tcttggacta atttctatat
     2461 cattaaattc aaaaaatgtt tttacagtgg tgattttgtc tctgaatgtt attggtccaa
     2521 cattgttgta attactctgt aaaaatatac aataatcatt taaaacatca taaggatcca
     2581 gatctttatc ttttaatttt tgaagaagtt cgtctacatc aattttatta ttatattttt
     2641 ctttaataaa ctttgcaaat gaggatagac gtaaatgata ttgtttagca gtattcttgt
     2701 tccttatact tacattttta ataaatttcg ttaatgatat gtttttttgt tcaaaagtag
     2761 tagtattaac ttgttgctgt gctggatctt tagacatatt gctaataaga ataggatttt
     2821 acatatgaaa taaatagtta ttgtattaat agtaatatat gcagtggaaa tagcaatata
     2881 aatagtaata ataaaaatta tgattctgat acaaattttt ctataattaa tatttcatca
     2941 gtacatgaat ctatacctca gccatattct gcgccatatg ccgcatcaaa gggaggaatg
     3001 gaaatgctta
//
LOCUS       DATIAS010000399         3306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1568546, whole genome shotgun sequence.
ACCESSION   DATIAS010000399 DATIAS010000000
VERSION     DATIAS010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3306
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568546"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(338..619)
                     /locus_tag="VLA74_08105"
     CDS             complement(338..619)
                     /locus_tag="VLA74_08105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50704.1"
                     /translation="MSVFGISQEFQSDNFGKNPREHLIIVLISIGLFILGFFILRRLV
                     NRNIVTDEYKEKLNKLEFSEKNNPNLGKFSLLLKLDIPIIEQRIGKYSH"
     gene            922..1446
                     /locus_tag="VLA74_08110"
     CDS             922..1446
                     /locus_tag="VLA74_08110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50705.1"
                     /translation="MMLVIIIILILFIGISYVAAESSIPITTNQSYSFVKETESINKN
                     ATNIISNIQFKQFLPQIPILNKPNLVLNDEFNNASFVQAGIGLRNVGSGTISIHTPYK
                     ASILKAYLYWTVIDTKPSNEIFLNGQKIFGELIAADKSCWNPLDKIFIFRSDVTENLL
                     ARSGLIDDQYISIH"
     gene            complement(1436..1906)
                     /locus_tag="VLA74_08115"
     CDS             complement(1436..1906)
                     /locus_tag="VLA74_08115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50706.1"
                     /translation="MNLNKTIRELQNRLDEVHPYSASTNSEVRNDGINYWKGKKIISV
                     KDWNDLYEKSSTYTNGYTITLTSRKLLQYFPDDYTGSIPTSGIGDEKLKEETQNWNND
                     YYELLEYRKNPTLGRMKCSKCLLSGSNDDPIFVGIEKVFARIVMKHCNNNDTSV"
     gene            complement(1893..2363)
                     /locus_tag="VLA74_08120"
     CDS             complement(1893..2363)
                     /locus_tag="VLA74_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50707.1"
                     /translation="MTIDQQNSSFNYDFDTNSSNSKSKFIIEERRRLVAKLWAQAKTE
                     TEIARELHCNVSTICRDIKFLKKLSQQFVFDLSKDLGFYYKGCIDTMDQIQQKCWNIY
                     NNDNVSQKDKLLALKIIKETCESKFSLIEKGPSVMALNSLQVRVEKIESNNEFK"
BASE COUNT         1156 a          487 c          406 g         1257 t
ORIGIN      
        1 gtagtaacca tcttttttta tgttataaga ctgacaacgt ggacaaatta cattattgtt
       61 cttcttccat ctaacctctc gaagtacgct tgtacaccaa ctttcatcag gaagagatgt
      121 ggttaaagta aacacatctt tgatttgtgt tatccactta atgtcaaaaa agcaattata
      181 actaccatat aaacatgttc aatttccaaa ttgaggttat tgtattcaat attaaaatta
      241 ataatattaa atgtgcttaa caatgtgctt aaataaagat ggcaaattca gagaaaactg
      301 tttaacaatg taataatttg aacatatcct cgccttccta atgagaatat tttccaatcc
      361 tctgctcgat aataggaata tccagtttta gtagtagaga aaatttccct aaattgggat
      421 tatttttttc agaaaactct aatttattta atttttcttt atattcatca gtaacaatat
      481 ttctattaac taatcttctt aatataaaaa accctaaaat aaataatcct atagaaatta
      541 aaacgataat taaatgctct cgaggatttt ttccaaaatt atctgattgg aattcctgcg
      601 atatgccaaa aacactcatt atagataatg ttaatgatat aaacaagtta attcgagtat
      661 ttccatcctc ttcacttttg acaaataatt ctttaagacg ttcatattcg caagcataaa
      721 ttcttttgaa gaatcaatca tgcataaaat attagcgaat agatatataa aaaaatattt
      781 taaaatatca gtataagttt tattttattg atactatatt ccaatcataa attttgtttt
      841 ttttattaac taaagatact aattctttaa tgataataag aggtaacttt aaaagaaaat
      901 tattttgata taaaattacc aatgatgtta gtaattataa tcattcttat tttatttatt
      961 ggaattagtt atgtagcagc tgaatcaagt ataccaataa caacaaatca atcttatagc
     1021 tttgtaaaag agacagaatc aattaacaaa aatgctacta acataatctc taatatacaa
     1081 tttaaacaat ttttacctca aataccaata ttaaataaac caaatcttgt gttaaatgat
     1141 gaatttaata atgcttcttt tgttcaagca ggaatagggt tgagaaatgt aggatcagga
     1201 actataagta tacatacccc ctataaagca tcaattctta aagcatattt atattggact
     1261 gtaatagata caaaaccatc aaatgaaatt tttttaaatg ggcaaaagat ttttggtgaa
     1321 ctaattgcag ctgataaaag ctgttggaat cctctggata aaatatttat atttagatca
     1381 gatgttactg aaaatttatt agcaagaagt ggacttattg atgatcagta tatttctata
     1441 cactagtatc attattatta caatgcttca ttacaattct agcaaatact ttttcaatac
     1501 caacaaaaat tggatcgtca tttgagccac ttaacaaaca ctttgagcat ttcattcttc
     1561 ccaaagtagg attctttctg tattcgagta attcataata atcattattc caattttggg
     1621 tctcttcctt tagcttttca tctcctattc ctgatgtagg tattgaacca gtataatcat
     1681 ctggaaagta ttgtaatagt tttctagatg ttagtgtaat tgtatatcca tttgtatatg
     1741 ttgaactctt ttcgtataga tcattccaat cttttactga tattattttt ttacctttcc
     1801 aataattaat cccatcattt ctgacttcac tattagtaga agccgaatat ggatgaactt
     1861 catctaatct attttgtaat tctctgatag ttttatttaa attcattatt cgattcaatc
     1921 ttttcaactc ttacctgtaa tgagtttaga gccataacag aaggtccttt ctctatcaaa
     1981 gagaatttgg attcacaagt ttctttaata atttttaatg ctagaagttt atccttttgc
     2041 gagacattat cattattata gatattccaa catttctgtt gtatctgatc cattgtatct
     2101 atacatcctt tataataaaa tcctagatct ttggataaat caaatacaaa ctgttgagac
     2161 aatttcttta ggaattttat atctctacaa atagtagaaa cattacaatg aagttctctt
     2221 gctatctccg tctctgtttt tgcttgggcc cataatttgg ccactaatct tcttcgttct
     2281 tcaataatga attttgattt gctgttgcta ctatttgtat caaaatcata attaaaacta
     2341 gaattttgct gatctatggt caattattgc attattatat atgctgttta aacttttata
     2401 tttttacttt aataaaaaaa tatttaagat agtccaatga gaatttttag ttataaattt
     2461 agtcgaatta atgatcttca taaatccaaa gtgatatttt taacatattc atctacgtta
     2521 tcaaaatata agaaatatta taacttttca ttatcaacag tagtagcagc agcaacaatt
     2581 tgtatcttta atttttcaga tgattaagga ttaatatctg taaaaactaa attgtgagca
     2641 ttaatttcca tattagaatc atcaaatgat gttaacggta atgatttctg attaattggt
     2701 agtttgctat atatatcaat taaagttccc catctaatac tatattctac agggtattgg
     2761 tgcttacatt tttgcttctg tttgaacctc aatccatgca acttcagaag ctactattat
     2821 tgattgatag aatccttctc cagaatatta gtaggttcat attgaaacct cacgtaataa
     2881 tatctgctag gtgccatact tgattacaca taaaatacgt cggtattagc cagtctgtaa
     2941 acagaagagc gtgagattgt aaatctcaga ctccttgcaa tcacatttta ccggttctct
     3001 tcatttatta ttttagaaat aatttgtttc atattttgta atattattat tattagttat
     3061 atctattata tactagatct tttgcataat tagaaagatt acagctatat tcctcttttt
     3121 tagcagttat ttcgtagatt tgctaaatta tgatagatta tctagaaaac cattattatt
     3181 caggtcattt actggactgg aactatctga atttgattcc atttgcaaac aagtagaatc
     3241 aaaatatcca gaatatgaga taaaacgtct atctaaaaga aaagatagaa caagatcaat
     3301 aggtgc
//
LOCUS       DATIAS010000400         2602 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1842534, whole genome shotgun sequence.
ACCESSION   DATIAS010000400 DATIAS010000000
VERSION     DATIAS010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1842534"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(309..1154)
                     /locus_tag="VLA74_08125"
     CDS             complement(309..1154)
                     /locus_tag="VLA74_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50708.1"
                     /translation="MKKIFLPSQKMLVVILASISIISASSYSVNEAMAFPHASLILVP
                     DEGDPRQEHANPIQLVLGHTNEPAFGKLPGIHDGKHFVEIDLTDAATVLPIQGNNETS
                     DPELELSNTQIIIDKYYFKDIESFQNAQSLEDADAIERNVPMSAVFGQPGLFYNRQVV
                     DEGIYGYTIRGVINYYGVANVPIEPTTKFCTSSEGDTSEFDSEGWTGSFGCVENIKDI
                     FFPPASKKSDGYPPKYDNGYGNNYGYSNSEEDYENPKEQYQSSYDQSDSYENGGYENP
                     KEQYQ"
     gene            1425..2111
                     /locus_tag="VLA74_08130"
     CDS             1425..2111
                     /locus_tag="VLA74_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50709.1"
                     /translation="MLPQPTTKIFAVLLATTLMSLGSLSLPLEVFASHSFEAGVSGDN
                     IPDNTHVDLSDITLPPGGVVPLYDASPNFISGHFLYRAVCDTNTDPNPDFSFTPEPLV
                     TAIAGHIDESEEMTHVESIPLYFVPHASSIDEDPETLDSCVYHAHIPDPLNGGSPRNT
                     DVDLVNCAGMDVTFNAGDAVDMNVQRVLGTIEDFYEDNVSLPSCELGPNPVFNLNDED
                     QTNDGLGHES"
     gene            complement(2343..>2602)
                     /locus_tag="VLA74_08135"
     CDS             complement(2343..>2602)
                     /locus_tag="VLA74_08135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50710.1"
                     /translation="NYETANLLAMKISTLFQLYLKSFIGLDKAKLDDITKLEDDFYKF
                     YSMINKNSSPADIMKKVHIDIQPTMQKIYNLKTNFPPSNFE"
BASE COUNT          859 a          379 c          371 g          993 t
ORIGIN      
        1 ataatattat tctcttttat attagattag atctgtaata ttttacatgg ttgctaatta
       61 cgcaaaagat ctaatataca tttataataa tttctttaat tgcaagttat ttttcactta
      121 aaataatgga aaaacaaata attatatctc atcttctata gttaacaata aaaagtaata
      181 tcaattattt tactaattta gattgtttaa taaattacag atttgttttc aaaaaataat
      241 gaaaaaaaga gaaattgaca tttgagatat actatctaat attgtctatc tttgttttgt
      301 ttatcatatc attgatattg ttcttttgga ttttcataac ctccgttttc atagctgtcg
      361 gattgatcat atgatgattg atattgttct tttggatttt cataatcttc ctcactattg
      421 ctatatccat agttgttgcc ataaccatta tcatatttgg gtggataacc atcagacttt
      481 ttgctagcag gtgggaagaa tatgtctttt atattttcta cacaaccaaa gcttcctgtc
      541 caaccttcac tgtcaaattc ggatgtatct ccttctgaac ttgtacagaa ttttgtagtc
      601 ggttctattg gaacattagc aacaccgtag taattaatta cacctcttat ggtatagcca
      661 taaatacctt catcaactac ttgtcgattg taaaagagac caggctgacc aaatacagca
      721 ctcattggta catttcgttc aatagcatct gcatcctcta gactttgtgc attttgaaag
      781 ctttctatat ccttgaaata atatttatct ataataattt gtgtatttga taattctaat
      841 tctggatctg atgtctcatt attaccttga attggtaata cagtagctgc atctgttaaa
      901 tctatttcta caaagtgttt tccgtcatgg ataccaggaa gcttgccaaa agcaggttca
      961 tttgtatgtc ctaatactag ttgaatagga ttcgcatgct cttgtctggg atcaccctca
     1021 tcaggcacta atataagact tgcatgtgga aatgccatag cttcatttac tgagtaagaa
     1081 cttgctgaaa ttatagatat acttgcaagt attactacta acattttttg tgaaggtaaa
     1141 aatattttct tcatattaag aacaattcat tacaaagata aaaatagtat ggtacattcg
     1201 tcgaatgatt tttttaattg gtaataatat agacatataa taaggttact taatttattt
     1261 tgttagatta ttattataaa ttttattata tttagtaaca tataaaaatt taatagttca
     1321 atttcattat taacctaata ataacattat tttataatac atattcatag cattcgacga
     1381 atgtatcata tctcttttat actatattta tgttgttgat tataatgtta ccacaaccaa
     1441 ctactaaaat atttgcagtt ctattggcaa caacactgat gagtttagga tctttatctt
     1501 tgcctttgga agtatttgca agtcatagct ttgaagcagg agtttcaggt gataatatac
     1561 cagacaatac acatgtagat ctaagtgata taactcttcc accaggagga gttgtgccat
     1621 tatacgatgc aagtccaaat tttatttcag gacatttctt atatagagca gtatgcgata
     1681 caaatacaga tccaaatcca gatttttcat ttacacctga accattagtt acagcaattg
     1741 caggtcatat tgatgagtct gaggaaatga cacatgttga atcaattcca ttatactttg
     1801 ttccacatgc atcttcaatt gatgaagacc ctgagacact agatagctgt gtttaccatg
     1861 cacacatacc tgatcctctc aatggaggtt cacctcgaaa cactgatgtt gacttagtaa
     1921 attgcgctgg tatggacgtt acttttaatg ctggtgatgc tgtagacatg aatgttcaac
     1981 gagttcttgg tacaatagaa gacttttatg aagataatgt cagtttacca agttgtgagt
     2041 tagggcctaa tcctgtattt aacttaaatg atgaagatca aactaatgat ggcttaggac
     2101 acgaaagtta atagtggaca taagataatt agatagatac aaaaaactat ctcttttttt
     2161 agtgatttaa tttatatatt tatttactta ctaaagttag tatacttatt ttaaattaaa
     2221 ttttcattac tattacaaat agtaaaataa tgattctttt ataaaaactt ttaacttaat
     2281 ttaagtttat ttcacatcat aataccttgg aattataatt tatttctagt tattgtatta
     2341 tattattcaa agtttgatgg gggaaaatta gttttcaagt tgtatatttt ttgcatggtt
     2401 ggttgaatat ctatatgaac ttttttcatt atatctgcag gagatgaatt cttatttatc
     2461 atggaataga atttataaaa atcatcttct aattttgtta tatcatctaa tttagccttg
     2521 tccaatccaa taaatgattt caaatataac tgaaataatg tagaaatttt cattgcaagc
     2581 aagttagcag tttcataatt ag
//
LOCUS       DATIAS010000401         3204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1979612, whole genome shotgun sequence.
ACCESSION   DATIAS010000401 DATIAS010000000
VERSION     DATIAS010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3204
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1979612"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1059)
                     /locus_tag="VLA74_08140"
     CDS             complement(<1..1059)
                     /locus_tag="VLA74_08140"
                     /inference="COORDINATES: protein motif:HMM:NF015418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HSF50711.1"
                     /translation="MHKEVNSYLSIRSAFNKLRKNIVVQPVSEEVKTRDSLGRVLYYD
                     IISSIDIPIHDSSHMDGFAVLYDDISNASRLNPVILKVINEIKLGNTKIEPLQPRQAS
                     RIPTGGYLPRNSDTVIPIEYVQYNENDRSVKIFSEFPKGSFVSPAGKDISKNKLLFKK
                     GHLIRIQDISLVNLLGIKKVNIFKKPKVAIIATGSELTNNIQEVTQGKVLNTNGPIIS
                     TLVEACGGIPVDLGITTDNIKDIQNKIKLALSQNDIILTIGGSSVGHKDLLAESINSM
                     GQPGILAEGIKLDRGRVTKIAVLKHKPIIILPGPIQGAVNAFIVLAIPLIRSFIGLSH
                     NNKAIINAHITDNWNARKQ"
     gene            1307..2380
                     /locus_tag="VLA74_08145"
     CDS             1307..2380
                     /locus_tag="VLA74_08145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50712.1"
                     /translation="MKIRYKSSQRYGMWILGAGLVTLVFSVSLFSSMSSQVVNSYAQS
                     EKIQNLTETNIPKVLPLVRGFADGNEVFYITTEVSDKNLANYLSNLTNSRVVYTPALK
                     YASAQSLANIYEFTNGIKGSGPEGFQPNVADSQPGDNNYSPLWKVNLVTWNNGITPRE
                     LTSEADILNALEKKELTIKPTDIIVNCPFVQWKDGSLKVRENKTLTDESPYGGGQVLN
                     IDTKKMQVTFVAHRGFAPDGSTIYYIATDASVKKVADDLGVVFVNKTGATLKSGSSSD
                     LFVFTNGIKGTGPMGFQASIASTNVGDEAYSPLWRIQAVTWKDPVQSQFLTSFEEITE
                     HAKQDHLKTEIAGVVVNCPFVES"
     gene            2800..>3204
                     /locus_tag="VLA74_08150"
     CDS             2800..>3204
                     /locus_tag="VLA74_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HSF50713.1"
                     /translation="MAEINIIVSAIAGMGSFFSPCILPILPAFISYLSGSTLHEISNI
                     NKTKTSVDNENIEATINSNKKSISLQKSTRVNIFLNTVYFVLGFSIVFAVLGVALNSL
                     LVNIGTTFQNTVQIFGGIVIISFGVFLILSSKL"
BASE COUNT         1075 a          479 c          507 g         1143 t
ORIGIN      
        1 ttgctttctg gcattccaat tgtcagtaat atgagcattt attatagctt tgttattatg
       61 agataatcca ataaaagatc taattagtgg gatagccaat acaatgaaag cattaacagc
      121 accttggata ggaccaggta atataataat tggcttatgt tttaatacag caattttagt
      181 tactcttcct ctatccaatt taattccctc agctaaaatt ccgggctgtc ccatagaatt
      241 gatagattct gcaaggaggt ccttatgtcc aacagaagat ccacctattg ttagaatgat
      301 atcattttga gataatgcca attttatctt gttctggata tctttaatat tatcagttgt
      361 tattcctagg tcaacaggta ttcctccaca tgcttccact aatgtggaaa taattggacc
      421 gttagtattg agaacctttc cttgagtaac ctcttgaata ttattggtga gctcacttcc
      481 ggttgcaatt attgcaactt tcggtttttt aaatatattt actttcttaa taccaagtaa
      541 gttcaccaaa gatatatctt gaattctaat taaatgtcct tttttaaaca ataatttatt
      601 tttagaaata tcctttcctg caggagatac aaatgatcct ttgggaaatt cagaaaagat
      661 ctttactgat ctatcgtttt cgttatattg tacatattca ataggaataa ctgtatcaga
      721 atttctaggt agatatccac ctgttggaat tctggaagct tgtcttggtt gtaaaggttc
      781 gattttagta tttccaagtt tgatttcgtt tattacttta agtattactg gattcaaacg
      841 tgaagcatta cttatatcgt catagagaac agcaaaccca tccatgtgtg aagaatcatg
      901 tattggaata tcaatcgatg aaataatgtc ataatataaa actcgaccta atgaatctct
      961 agtttttact tcttcagata ccggctgaac aacaatattt tttcttaatt tgttaaaagc
     1021 tgatctaatg gataaatatg aatttacttc tttatgcatg atattataca tttaaaaata
     1081 atataatatg attcttttaa ttacaaatta ttatattaaa atattctatt ttttttaagc
     1141 ttattaattc agcataatgg tattctcaaa ataaagatat cgtctttagt tatgagtttt
     1201 ataaagatgc catagatagt tactatagaa tctggaatta atttgggtat aaattggact
     1261 caatgtggaa aaatagtttt taaatccaat tacaaaatga aatttaatga aaatcagata
     1321 taaatcaagt caaagatatg gaatgtggat tttaggagca ggattagtta cattggtttt
     1381 ttcagtgtct ctattctctt ctatgtcttc gcaagtagta aattcctatg cacagagtga
     1441 gaaaatacaa aatcttacgg aaacaaatat tccaaaggtt cttcctctag ttagaggttt
     1501 tgcagacggt aatgaagttt tctatattac aacagaggta tcagataaga acctggcaaa
     1561 ttatctttct aatctgacta attcaagagt tgtatatact cctgcattaa aatatgcatc
     1621 agcacaatca cttgcaaata tatatgaatt cactaatggt attaaaggaa gtggtccgga
     1681 aggatttcag ccaaatgttg cagactcaca acctggagat aataattatt caccattatg
     1741 gaaagttaat cttgtaacat ggaataatgg tataacgcca cgagaattaa catcggaagc
     1801 agatattctc aacgcattag agaaaaagga gttaacaatt aaaccaacag atataattgt
     1861 aaactgtcca tttgtacagt ggaaagatgg ttctctaaaa gttagagaaa ataagacatt
     1921 aaccgatgaa tcgccgtatg gtggaggaca agttctaaac attgatacaa aaaagatgca
     1981 ggttactttt gtagcacata gaggatttgc tcctgatggc tccaccatat attatatagc
     2041 aactgatgct tctgtcaaga aagttgcaga tgatctagga gttgtatttg tcaataaaac
     2101 tggtgcaact ctaaaatcag ggtcttcttc agatctcttt gtatttacaa acggaataaa
     2161 gggaactggc ccaatgggat tccaggcaag tattgcatct actaatgtag gcgatgaagc
     2221 atatagtcca ctgtggagaa ttcaagctgt aacatggaaa gatcctgtac aatcacaatt
     2281 tcttacttca tttgaagaaa taacagaaca tgcaaaacaa gatcatctaa agactgaaat
     2341 tgcgggagta gtagttaatt gtccatttgt tgaatcataa cactacctct cttctttctc
     2401 caaccttttt tttaattttg aattagcgag cgaattctaa ctaatttatt aacctattag
     2461 caataatata tctcataatt agtacggctt tttattgtaa tggtaaatgt ccttgtttat
     2521 taagaattgt tgattagtat aatttattac ttgcttttat ggtcataatt tatattaata
     2581 atttaatcat agtattagta caataatctt tatagatgaa agttgtgata ttttgtttga
     2641 ttaataaata ctaataatta gttttaacgt gtagccttag caagctattg aacctgcaat
     2701 tcataaatta aactccgtga tatatttata tcaacttggg tagattttgg gtctaatttg
     2761 ggaatatcct tttttattaa gaattattaa attctataca tggcagaaat taatataata
     2821 gtttcagcta tcgctggaat gggatcattc ttctctcctt gtatattacc tatcctacct
     2881 gcttttattt cctatttatc aggctcaact cttcatgaaa ttagtaacat aaataaaaca
     2941 aagacttctg ttgataatga gaatattgag gcaactatca acagcaataa aaaatctata
     3001 tctctacaga aatctactag agttaatata ttcttaaata cagtttattt tgtactagga
     3061 ttttcaatag tgtttgccgt tttgggagtt gctctcaaca gtcttttggt aaatataggt
     3121 actacttttc aaaacactgt ccaaatattc ggtggaatcg tgattatatc ttttggagta
     3181 tttctgatat tatcttcaaa gtta
//
LOCUS       DATIAS010000402         2020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_208560, whole genome shotgun sequence.
ACCESSION   DATIAS010000402 DATIAS010000000
VERSION     DATIAS010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208560"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1046
                     /locus_tag="VLA74_08155"
     CDS             <1..1046
                     /locus_tag="VLA74_08155"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSF50714.1"
                     /translation="LMDKGSSPTPGALAWVRVPTTIEHTTNNNKRHFEIIQNSKRHKE
                     ENPPKITNIYKNAILFENSQMRDLYNRKKKLDYWTERIHKDLDEHDKKDVLKFLEIMQ
                     EKDQSILTITRCISIVIQIRKQIDKPLAKVTKEDIKAIFQWMDNKRYKVETVEKYRAV
                     LKKFYKMVYGNNEYYPDCVKWFSVKVGKDKQSNERRLDIAEYLEEEEIPILIENAPTL
                     QKKTFLACFYESGSRPEEFLRLSNLDCKIDTNGAILILRGKTGERRIRIVSFAKLLQQ
                     WLDVHPLKHQKQFPLWISQATNYNNQPLGLRGAQKIIEEALAKAKLDKHKRLYLLRHS
                     RATHLCKWLTDSD"
     gene            1025..1150
                     /locus_tag="VLA74_08160"
     CDS             1025..1150
                     /locus_tag="VLA74_08160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50715.1"
                     /translation="MVDRFRLKNNKIRFGLIMGIGWNMGVLNRLQCAKRLEIKIT"
     gene            1351..1575
                     /locus_tag="VLA74_08165"
     CDS             1351..1575
                     /locus_tag="VLA74_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50716.1"
                     /translation="MMLITEPSFQSCLLRISRTFNFNNLEVKIFQRYKENIPTINNQL
                     VREFRLYLADNDIKLKINSMKLETNRKLIL"
BASE COUNT          850 a          258 c          309 g          603 t
ORIGIN      
        1 atttgatgga taagggttcg agtcccactc ccggcgcttt agcctgggtt cgtgtcccta
       61 ccacaataga acatactaca aataacaaca aaagacattt tgaaataatt caaaattcta
      121 aaagacacaa agaagaaaat ccccctaaaa taaccaatat ctataaaaat gccatattat
      181 ttgaaaatag tcaaatgcga gatctttaca acagaaaaaa gaagttagac tattggactg
      241 aaagaataca taaagacttg gatgaacatg ataaaaaaga tgtattaaaa tttcttgaaa
      301 taatgcaaga aaaagatcaa agcattttaa ctattaccag atgtattagc atagttatcc
      361 agataagaaa acaaatagat aaacctctgg caaaagttac aaaagaagat atcaaagcaa
      421 tttttcaatg gatggataac aaaagataca aggtagaaac agttgaaaag tacagagctg
      481 ttttaaaaaa gttttacaag atggtatatg gtaataatga atactatcct gattgtgtga
      541 aatggttttc tgttaaagtt ggcaaagaca aacagagtaa tgaaagaagg ttagatattg
      601 cagaatatct tgaagaagaa gaaattccaa tactgataga aaatgctcct acacttcaga
      661 aaaaaacatt tttagcctgt ttttatgaat cgggaagtcg acctgaagaa tttcttagac
      721 tatctaattt agattgcaaa atagatacaa atggagccat attgatttta agaggaaaaa
      781 cgggagaaag acgaattaga attgtttcct ttgccaaatt attgcaacaa tggttagatg
      841 tgcatccatt aaaacatcaa aaacaatttc cattatggat aagtcaggca actaactaca
      901 acaatcaacc tttaggattg agaggagccc aaaagataat tgaagaggca ttagcaaaag
      961 caaaactgga taaacataaa agattatatc tgctacggca ctctcgagca actcacttat
     1021 gcaaatggtt gacagattca gattaaagaa taacaagata agatttggat tgataatggg
     1081 tataggatgg aacatgggtg ttctaaacag attgcaatgc gcaaaaagac tagaaataaa
     1141 gattacataa tatgttatat cgaattaggc aacaaccccc ttctaagcaa caaattcaat
     1201 aaaaccaagg agggttgcga ggcattttta cctctatttt gaaactgata ttcttaaata
     1261 acaatatttt aaaataataa taaatttgta tagtttgtat tacttaaata taaaattctt
     1321 tgtgatgtcc ataagttaca ataatcattt atgatgctta ttacagagcc ttctttccaa
     1381 tcatgtttgt taagaatttc aagaacattc aatttcaata atttagaagt taaaatattt
     1441 caaagatata aagaaaatat tccaacaatt aataatcaat tagtaagaga attcagactt
     1501 tatttggcag ataatgatat caaactaaaa attaattcta tgaaattaga aacaaataga
     1561 aaacttattc tttaaagcat aatggaagca ttaataacat accctaatgt tatcaatgga
     1621 ttgaagaaag attatttaaa actccaattt cgaattataa aaaaattact gttgatttat
     1681 tattagttcc attctttata gttataaaga attatattgc aaaaaagact ttgatttaat
     1741 ttatgaatat attattaagt gtcatgaact aaaacctttg aaaccatctg taaatgaatt
     1801 tgagaaaaga attaaaaagg caattgctat atcaacagag aataaaattc cgccaataaa
     1861 aatagaaaat ataagaaaca aatattttaa atagtatcat cttaatcaat ggaatatttt
     1921 atactgtaat gttgttaata aataagttgt gaataataaa gataaaatga tatattgtta
     1981 ggattaattg gacggaatta tataggtttc tgcctattcg
//
LOCUS       DATIAS010000403         3353 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1705817, whole genome shotgun sequence.
ACCESSION   DATIAS010000403 DATIAS010000000
VERSION     DATIAS010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1705817"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1594)
                     /locus_tag="VLA74_08170"
     CDS             complement(<1..1594)
                     /locus_tag="VLA74_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HSF50717.1"
                     /translation="MSKQKMSKEEEIKTDSGFSVKAVYTRNNIAKKNIKDEKPGKYPF
                     TRGIHDLMYRQRLWTMRQYSGFGSAEETNNRFKFLLDHGQTGLSLAFDLPTQTGRDSD
                     NPQSEGEVGRTGVAISSIEDMLTCFDAIPLDKVSTSMTINSTASTLLSLYITVAETQG
                     IPPTSLRGTTQNDILKEYIARNTYIYPPKPSIRLIGDMIQYCSKYVPQWYPISISGYH
                     MREAGSNATQELAFTFANAIEYIQTCIDRGLKVDYFAPRLSFFFCCTMEFFEEIAKFR
                     AARRIYAKIMKERFHAKDFKSCTLRFHVQTSGESLTAQQVDNNIVRVTTEALAAVLGG
                     CQSLHTNSRDEALALPTEESVKIALRTQQIIATETGVTKTVDPLAGSYYVESLTNQIE
                     EEVDKYLKRINKMGGALSAVEKGFFQDEIRKNAYSLKKEIDEQKRIIVGVNKYQDRHD
                     IEPSLNVMDSQIENRQIMRLKEFKKNRDKIKVDHAIELLIKNAEKDNQNLMPHIINAV
                     KNKVTLGEISNAFQSVFGKYEPK"
     gene            complement(1604..2575)
                     /gene="meaB"
                     /locus_tag="VLA74_08175"
     CDS             complement(1604..2575)
                     /gene="meaB"
                     /locus_tag="VLA74_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HSF50718.1"
                     /translation="MLKIVEGILKGDRRSLSRAISIIDNEEGEYQEIIRQIFKKTGKA
                     MTIGFTGPGGSGKSSLIGKLVDEFKEIGYKIAIIAVDPTSPITGGAILGDRIRMQGNI
                     IDNSDVFMRSIASRGAIGGVSKSLRKIIRILDAAGYNLIIVESVGAGQLEIEVSKIVN
                     LTIVLFTPNTGDKVQAIKAGITEIGDIYIVNKADIEGANTLYNTIKDLIGETEKKPTI
                     LKCSAKTGIGIKEIAENINKMLNDRVDNFKEKELGLLEVELKDMVLNILEDKILTMLE
                     DNPSYYNFIDKIQNKKVDPYQAADDLTSGLLNNIINQYPKKSKIIRS"
     gene            2755..3183
                     /locus_tag="VLA74_08180"
     CDS             2755..3183
                     /locus_tag="VLA74_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HSF50719.1"
                     /translation="MTINQTQQVKRIRVLVAKMGLDGHDRGALVICRALRDAGMEVIY
                     SGLFCTPQQVAKTAIDEDVDAIAMSLLNGAHLTLFPKVAKILKEQGIDDILLIGGGVI
                     PEKDKKLLEKEGITGNFGPGTPLSTIINHINSSIKKKREI"
BASE COUNT         1018 a          554 c          470 g         1311 t
ORIGIN      
        1 tctttggttc atattttcca aatacagatt gaaaagcgtt actaatctcg ccaagtgtga
       61 ctttattttt tactgcattt atgatatgtg gcattaaatt ttgattgtct ttttctgcat
      121 tcttaattaa aagttctatt gcgtggtcaa ctttaatttt atctctattt ttcttaaact
      181 cctttaacct cataatttgt ctgttctcaa tttgagaatc catgacattt agagaaggtt
      241 caatatcatg gcgatcttga tatttattta ctccaactat aattcttttt tgttcatcta
      301 tttctttttt taaagaatat gcattcttcc ttatttcatc ctggaaaaat cccttttcta
      361 cagcagaaag agctccaccc attttattta tcctttttaa gtatttatca acttcttcct
      421 ctatttgatt agttaaagat tcaacataat aagatcccgc caaaggatca acagtttttg
      481 ttaccccagt ttcagtagct attatttgtt gtgttctcaa agctattttt actgattctt
      541 ctgttggtaa tgctagtgct tcatctcttg aattggtatg taaagattga catcctccta
      601 atactgcagc aagggcttct gttgttactc ttacaatgtt attgtcaacc tgttgagcag
      661 ttagagattc tccgctagtt tgaacatgaa aacgcaaagt acatgattta aaatctttag
      721 catgaaatct ttctttcatt attttagcat atatccttct ggctgctcta aatttggcta
      781 tttcttcaaa aaattccata gtacaacaaa agaaaaatga aagccgtggt gcaaaatagt
      841 caactttaag tcctctatct atacaagtct gaatatattc aattgcattt gcaaaagtaa
      901 atgctaattc ttgagtagca ttagatcctg cctcacgcat atgatatcca gaaatgctaa
      961 ttgggtacca ttgaggaaca tattttgaac aatattgaat catatctcca attaaacgaa
     1021 tcgatggttt tggtggataa atatatgtat ttctagctat atactctttt aaaatatcat
     1081 tttgagttgt tcctcttaaa gaagtaggtg gaattccttg tgtctctgcg acggttatat
     1141 ataaagacaa taatgtagaa gcagttgaat tgattgtcat cgaggtactt actttatcta
     1201 atggaattgc atcaaagcaa gtcaacatat cttcaattga actgattgct acacctgttc
     1261 ttccaacttc accttcagat tgtggattat ccgagtctcg cccggtttgt gtaggtaaat
     1321 caaaggcaag ggataaacct gtttgaccat gatctaaaag aaacttaaat ctattattag
     1381 tttcttcggc acttccaaat ccgctatatt gcctcatagt ccacagacgc tgacgataca
     1441 tcaaatcgtg gattcctctc gtaaaaggat atttacctgg tttttcatct tttatatttt
     1501 tctttgcaat attgtttcta gtataaactg ctttaactga aaagccagag tcagttttta
     1561 tttcttcttc tttggacatt ttttgttttg acatttctaa cttttaactc ctaatgattt
     1621 ttgatttttt tggatattga ttaattatat tgtttaatag tcctgaagta agatcatctg
     1681 ctgcttgata gggatccact tttttatttt gtattttatc aatgaaatta taatatgaag
     1741 gattatcctc taacattgtt aagattttat cttcgaggat atttaaaacc atatctttta
     1801 attcaacttc taacaatcct aattcttttt ctttgaaatt atcaactcga tcattaagca
     1861 ttttattaat attttctgct atttctttta tccctattcc agtttttgct gagcatttta
     1921 atatagttgg ttttttttct gtttcgccaa ttaaatcctt tattgtatta taaagagtat
     1981 tagcaccttc aatatctgct ttatttacta tatatatatc tcctatttca gtaattcctg
     2041 ctttaatagc ttgtacctta tctcctgtat taggagtaaa aagaactatt gtaaggttta
     2101 ctattttgga tacttctatt tctaattggc ctgctcctac gctctcaact attattaaat
     2161 tataacctgc agcatcaaga attctaatta tttttcttag cgattttgaa actcctccaa
     2221 tagcacctct cgatgctatg cttctcataa atacatcaga attatctatt atattgcctt
     2281 gcatacgaat acgatctccg agaatagcac ctcctgttat tgggcttgta ggatctactg
     2341 caattattgc tattttgtac ccaatttctt tgaattcatc taccaatttt ccaattaaag
     2401 aacttttgcc tgagcctcct ggaccagtaa atccaatagt cattgctttt cctgtctttt
     2461 taaaaatttg acgaataatt tcttgatatt ctccttcttc attatctatt atagaaattg
     2521 ctcgtgaaag tgaacgtcta tctcctttca aaattccctc tactattttt agcaatattt
     2581 tctctaaaat tttattattt acctgcttat aaataatatt ttaattgaaa atccaaattt
     2641 ggttccaatt aatgatgaaa gaaaactttt acctttattt atataattgt atctataaaa
     2701 ataaagtaaa taagataaag atttaaaatc ccaatggctt aatactaata gaatatgacc
     2761 attaaccaaa ctcaacaagt aaaacgtatt agggttttag ttgcaaaaat gggtttagat
     2821 ggacatgatc gtggagcatt ggttatttgt agagcattaa gagatgcagg aatggaagta
     2881 atttattctg gattattttg tactcctcaa caggttgcaa aaactgctat tgatgaagat
     2941 gttgatgcta ttgcaatgag tttacttaat ggtgcacatt taacattatt tcctaaagtt
     3001 gcaaaaatac taaaagaaca aggtattgat gatatcttac ttattggtgg aggagtaatt
     3061 cctgaaaagg ataaaaaact actagaaaag gagggaatca caggtaattt tggtccagga
     3121 acaccactgt caacaattat caatcatatt aattcaagta ttaagaaaaa aagagaaata
     3181 taaaaacaag ttaataataa taataaattt ttattttaca actttggttc tttgtctaat
     3241 gttaaaggtc tctttttttc tttatgtttg tattgatatg gttgataatt atttgaagtg
     3301 gtgttcctgg tccaaaatta cctgtaattc cttgcttttc cagtaacttt tta
//
LOCUS       DATIAS010000404         2851 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1297231, whole genome shotgun sequence.
ACCESSION   DATIAS010000404 DATIAS010000000
VERSION     DATIAS010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297231"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(339..482)
                     /locus_tag="VLA74_08185"
     CDS             complement(339..482)
                     /locus_tag="VLA74_08185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50720.1"
                     /translation="MFGKAECRLCGENVRFALRHLKTKHQEEFEKVTHLEMSKIMKKY
                     FKD"
     gene            complement(629..1957)
                     /gene="thiC"
                     /locus_tag="VLA74_08190"
     CDS             complement(629..1957)
                     /gene="thiC"
                     /locus_tag="VLA74_08190"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HSF50721.1"
                     /translation="MSSARRGIATKEMIQVAKDEDIDLNFLIQKVASGSIIIPRNNAR
                     RQDIKVVGIGKGLRTKVNVNIGTSTLYQNIDEEIAKAKVAVKYGGDTIMDLSDGGDLN
                     LIREKLLEAAPITFGTVPIYQAYAYGVEKYKNPLNITEDDFLNAFEKHVKDGVDYTTI
                     HSGITREIANRILEVKRHAGIVSKGGTITAAWMLKYERENPYFQHFDYMCEIAKKYDV
                     TFSLGDALRPGSILDSHDELQVAEMINVARLAKRAHEYEVQVMIEGPGHVPLDEVAAN
                     VRLAKSLMGDVPYYVLGPLVTDIAAGYDHIASAIGAAISASEGVDLLCYLTPAEHLAL
                     PTVEDVKEGLVAYRIAAHAGDLVKIRDKAIKWDKEITKARRTLNWQKQIELAINPEEA
                     ERIHKRQGQHEGNNVPCTMCGGACVYIMLPQQRKYEDKSDEDENKNAINN"
     gene            complement(2153..2290)
                     /locus_tag="VLA74_08195"
     CDS             complement(2153..2290)
                     /locus_tag="VLA74_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50722.1"
                     /translation="MRNKQINALTEQIKSLLWIDPLPIRKYDSTYPSVLLPGLLYQIV
                     V"
BASE COUNT          879 a          515 c          402 g         1055 t
ORIGIN      
        1 tctctgcata tttcctttat cgttaaaatt tcaatctctg cgaaaatgat agttgtattc
       61 agaagcctag gcctcttata gagagcaaac cgcaaattta ttagaacttc caaatgatga
      121 ttagatttta agtgaaaata acaataatat taaatcatag attcttttag cctatgaaat
      181 tgaaattttg caatttataa acttggtaat gttgaataat aaagaatatg gtcaaaaata
      241 ctgacaatat ttttcttatt gttgaccaaa ataattctag atatatcaaa acatccgata
      301 aattatgacg gataaataat ttaattgtgt ttttgctatt aatccttgaa atattttttc
      361 attatttttg acatctcaag atgtgttact ttttcaaatt cctcttgatg ttttgttttc
      421 aaatgacgta atgcaaatcg tacattttca ccacataatc gacattcagc tttgccaaac
      481 aatctagata taataataac attgagaatt acttaacttt tttgttatct ttccagttat
      541 cttataaagt cattttaaat atcaaaagtg attttatata aaaaatattt aatcaaaaaa
      601 tgactgttct aatactttgt ctatttaatc agttatttat tgcgttttta ttttcatctt
      661 cgtcagattt gtcttcatat tttctttgtt gtggcaacat tatatagaca catgctcctc
      721 cacacattgt acagggtaca ttattacctt catgttgacc ttgtcttttg tgaattcttt
      781 ctgcttcttc tgggtttatc gcaagttcaa tctgtttctg ccaattaagt gtccttcttg
      841 cttttgttat ttctttgtcc cattttatgg ccttgtccct tatttttacc aggtcaccag
      901 catgagcggc aattctgtaa gctactaatc cctctttgac atcctcaact gtgggcaatg
      961 caaggtgctc tgcaggagtt aaatagcata ataggtctac accctctgat gctgaaattg
     1021 cagcccctat cgcgctggct atgtgatcgt acccagcggc tatgtcagta accagaggtc
     1081 ccaatacata ataaggcaca tcacccatga gagattttgc tagtctaaca ttggctgcca
     1141 cctcatccaa cggaacatga ccaggtcctt caatcattac ctgaacttca tattcatgtg
     1201 cgcgttttgc gagacgagct acatttatca tttctgcaac ctgaagctca tcatgagaat
     1261 ccaaaataga ccctggtctt aatgcgtcac caagactgaa agtaacatca tatttttttg
     1321 caatttcaca catataatca aaatgttgga aatagggatt ttctctctcg tattttagca
     1381 tccatgcggc tgtaattgtc ccccctttag aaacaatacc tgcgtgtctt tttacttcta
     1441 aaatcctatt agcaatctcc ctagttattc ctgaatgaat agtggtatag tctactccat
     1501 cttttacatg tttttcgaaa gcattgagaa aatcatcttc agttatattc agtgggtttt
     1561 tatatttttc tactccatat gcatacgctt ggtaaattgg aacggttcca aaagttatag
     1621 gtgcagcttc taagagtttt tctcttatta aattcaagtc tcctccatca gataaatcca
     1681 ttatggtgtc tccgccatat tttaccgcaa cttttgcttt tgcaatctct tcgtctatat
     1741 tttgatagag agtagacgtt ccaatgttta catttacttt cgttcgaaga cctttaccta
     1801 tgcctacgac ctttatatct tgcctcctcg cattgtttct cggaataatt atagaaccac
     1861 tggcaacttt ttgaataaga aaatttaaat ctatatcctc gtcctttgca acttggatca
     1921 tctctttagt tgcaattccc cttcttgcac tgctcatctg agtactcatt ttctttcaaa
     1981 taaatatact caatgtagat ataaaagaat gtctaatgtt ccctttagtc agttgagggg
     2041 aagtaaatca gtaaacaaat gtcatatgcc aacaatacta tctaatcaat ggtgataccg
     2101 ctaacatgtc tttgattggt ctaggattgt attttttagt tttatagtta tattatacaa
     2161 ctatctggta taacaagcct ggcaaaagta ccgacggata agtactgtca tatttcctta
     2221 taggtaatgg atctatccaa agaagagatt tgatctgttc tgtcaatgca ttaatttgtt
     2281 tatttctcaa tggatagata gactttccat tagattctaa aactcgacta attagatctt
     2341 atcaacagga tattcgcata cctttatact ggacacatta gctgaaattc catatcagtg
     2401 tttaatacat ttttaaatat tgtacaataa gcaggaacat tttatagatt ttttataaaa
     2461 atcacaagtt tgagttaaat ctttaaaaaa cctacagctg gccatattaa ttagttgaga
     2521 tattttcaaa tttatgtatg tgaagatgtt tgtgttatag aattcgattt tagtggtcaa
     2581 tttatcatac tatctaggac aattttaata taattgaaaa aattcagtct ttttttggta
     2641 ctctttaaaa tgatctaaaa atagaaacat cgacatcata ataaataagt ttcaaatttt
     2701 ttttactaaa ataactccta taaactgatt ctatttataa tttttaggca gatacttatg
     2761 aaaaaaataa aaattaccat cggataacaa acattatcag gaaatatgtc atattctaaa
     2821 aattcctctt cgaagggccc ctatgaacat c
//
LOCUS       DATIAS010000405         2101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1843847, whole genome shotgun sequence.
ACCESSION   DATIAS010000405 DATIAS010000000
VERSION     DATIAS010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843847"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            314..667
                     /locus_tag="VLA74_08200"
     CDS             314..667
                     /locus_tag="VLA74_08200"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSF50723.1"
                     /translation="MAIGGSEWIIIILISIFLIFGSKKLPEISRQIGKAVGEYNRTRE
                     ALSKEIRDISNLDSQKIKVDNSKNFTIGKIIEGPVSSEREKLERIAKSLNIEFADKTD
                     EELRLVINERMKKDN"
     gene            736..2001
                     /locus_tag="VLA74_08205"
     CDS             736..2001
                     /locus_tag="VLA74_08205"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HSF50724.1"
                     /translation="MSSNVSEKINPFQIALKQLEEAAKILNLDKGMFDVLSHPKRVLT
                     VSIPVKMDDGSMRVFTGYRSQHNDARGPYKGGIRYHPDVTIDEVKALSMWMTWKCAIA
                     DIPYGGGKGGIICNPKEMSENELEKMTRRFAYMISDIIGPHTDIPAPDVYTGGKEMAW
                     IMDTYSALKGNFVQPELITGKPIPIGGSLGRNEATGRGLAYTVREAAKELGINMKEST
                     TVVQGFGNAGQFSSKLVQDQGGKVIAASDTQGAIINSEGISADALMKHKKETGSVVGF
                     DGSRSISNEELLETECTILIPAALENQITKNNAGKIKAKIVAEAANGPTTPEADEVLY
                     KNGILVIPDILANGGGVTVSYFEWLQNLRRDYWTEDEVNHRLDKNITKSFHDVYDAHK
                     KYNVDMRKAATLLAINRVAEATKIRGIWP"
BASE COUNT          779 a          292 c          406 g          624 t
ORIGIN      
        1 ataatgtctg ctttttctac gagtccatca acctcgaaac ttaatttaac gtgatatttt
       61 actataccgg tactaggcaa ttccataacc tcttgtttat tataaagtaa aaataaggtt
      121 gataggcacg aatataagtg ctttgactaa catttctaaa taaattttaa ataattagaa
      181 caaattttaa tttttttatt aaaaaaagaa tcagacaact aagaaatatt ataatatata
      241 ttttttactt gcataaatac aagataagtg aaataaaggt attttaggta attaacgaat
      301 ataatttcga tatatggcta tcgggggatc agaatggatt attattattt tgatcagcat
      361 ttttttgatc ttcggttcca aaaaattacc agaaatatct agacagatag gcaaggcagt
      421 aggcgaatat aatagaacta gagaggcgtt atcgaaagag attagagata tttcaaacct
      481 tgattcacag aagattaagg tagataattc caagaatttt acaattggta aaattattga
      541 gggcccagtc tcttctgaaa gagaaaaatt ggaaaggata gccaaatcat tgaatattga
      601 attcgcggac aaaactgacg aagaacttcg tttggtaatc aatgaacgaa tgaaaaaaga
      661 taactaatag gtatttttct acgataatta ttagatatat ttataattca ggatttaaat
      721 agaacgtaca gaaatatgtc ttcaaatgtt agtgaaaaaa taaatccatt tcaaattgca
      781 ttaaaacaat tggaagaagc cgcaaaaatt cttaatcttg ataaaggtat gtttgatgtg
      841 ttatctcatc ctaaaagagt acttactgtt tccatcccag taaagatgga cgatggatcc
      901 atgagggtat ttaccggata cagatctcaa cataatgatg caaggggtcc atataagggg
      961 ggaattagat accacccaga tgttacaata gatgaagtta aggctttatc aatgtggatg
     1021 acctggaaat gtgcaattgc tgacattcct tatggtggtg ggaaaggggg aataatttgc
     1081 aatccgaaag aaatgtcaga aaatgaacta gaaaaaatga caagaagatt tgcatatatg
     1141 atttctgata taattggtcc tcatacagat attccagcac ccgatgtcta tactggtggt
     1201 aaagaaatgg catggataat ggatacatac tctgcactta aaggtaattt tgtacagcca
     1261 gaattaataa caggtaaacc tattcctatc ggcggttctt tgggaagaaa tgaagccact
     1321 ggaagaggac ttgcttatac tgtaagagag gctgctaaag aacttggcat aaacatgaag
     1381 gaatctacaa ctgttgtcca aggcttcgga aatgcgggac aattttcttc aaaattagta
     1441 caagatcaag gtggaaaggt gattgctgca tcagatactc agggagctat tatcaacagt
     1501 gaaggaatca gcgcagacgc attgatgaag cataaaaagg aaactggttc agtagtagga
     1561 tttgatggat cgagatcaat ttcaaacgaa gaactattgg aaacggaatg tactatttta
     1621 atacctgcgg ctttagaaaa ccaaataaca aagaataatg caggaaaaat taaggcaaaa
     1681 atagttgctg aggccgcaaa cggtccaaca accccagagg ctgacgaagt actctataag
     1741 aatggaattc ttgtaatacc agatattcta gcaaatggtg gaggagtaac agtatcttat
     1801 tttgaatggt tacaaaattt gagaagagat tattggactg aagatgaagt aaatcacaga
     1861 cttgacaaga atattactaa atcattccat gatgtttatg atgcacataa gaaatataac
     1921 gtggacatga gaaaagctgc cactttactt gctataaata gagttgcaga ggcaacaaaa
     1981 attagaggaa tttggccata agatatcttt tcgtttcttt tctttttgct aaagcataag
     2041 taatttattc aatttccttg gtttattttt ttgaaaatcc atttattatt agactgatct
     2101 t
//
LOCUS       DATIAS010000406         2314 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1844060, whole genome shotgun sequence.
ACCESSION   DATIAS010000406 DATIAS010000000
VERSION     DATIAS010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1844060"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VLA74_08210"
     CDS             <1..761
                     /locus_tag="VLA74_08210"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HSF50725.1"
                     /translation="VSEYIAKNLSKKNIRVSSIPPFETSNFKNSNSNFNSLVNDIDLV
                     IAVGGDGTTLRAFRFHPSDIPVFSINVGGTRGILSEIKLDSIDYAINAILDGNYYYDE
                     RIRIQASLSNKIFLPALNDILLFRNNLTRTPHIAIKFRDSIISQRMDGIIISTPTGST
                     GHSVSLEGPILHEELSCLVINPIASINKLPSIVVPPEEIEISSNHKLDLIIDGQDRFL
                     IEENDTIKISIFPIKARFIRLIKKGFRQLEKLGF"
     gene            742..1251
                     /locus_tag="VLA74_08215"
     CDS             742..1251
                     /locus_tag="VLA74_08215"
                     /inference="COORDINATES: protein motif:HMM:NF028455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50726.1"
                     /translation="MKNWDSDIFILDSSAFYAGFYRSINLKFYTTTTIMKEIKHILNT
                     SLTLDLLISSGVLVIQDPVIESINKIINTAHHTGDIKKLSKADISILSLAYQMNKTLV
                     SDDYSIQNVAKFLGIKTISLGNEGIVKLRKWKNFCKTCRKQYPPNIKECTICGNPTKR
                     KYKTLSSYV"
     gene            1411..>2314
                     /locus_tag="VLA74_08220"
     CDS             1411..>2314
                     /locus_tag="VLA74_08220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSF50727.1"
                     /translation="MISLSVFKNNFSLLLIIIIIGIGFLFIISYQSSAFTAEEIKKIA
                     EEDIRSNARIQAYDLSRILVHSLDSINSNLKVLTSSPFLFENDIDQVQNLLYSAQSST
                     LHITDAYYWIDVNGRIVTSSKIYQIPQANEILDTQNQPFFLNPKKTLTPYYSTSITSK
                     GSPSAFLYISYPIIKQQIVQSQNSTYNVKQTFNGVLVAAISVKSLGTFLQNEMTTSII
                     GNVGLMDRDGVIIYARNQSLIGNNYMSDEFQSLIPNDLRENYNRIIKKGLEGESFAED
                     LIYNGSTITLSYEPIVINEKYLWTL"
BASE COUNT          869 a          327 c          313 g          805 t
ORIGIN      
        1 aggtatcaga atatattgct aaaaaccttt caaaaaaaaa tattagggta tcctctattc
       61 ctccatttga aacatctaac tttaaaaata gcaattctaa ttttaattca ttagtcaatg
      121 acattgatct tgtaatagca gttggaggag acggtacgac tcttcgagct tttagatttc
      181 atccaagtga tattcctgtt tttagtatta atgttggagg tacacgtggt atcctctctg
      241 aaatcaaatt agattcaatt gattatgcta taaatgcaat attagatggc aattattact
      301 atgatgaaag aattaggatt caagcttctt tatctaataa aatttttctt cctgccttaa
      361 atgatatatt attattcaga aataatctta ctagaacccc acatattgca ataaaattta
      421 gagatagtat tatcagtcag cgtatggatg gaataataat atctacacct actggatcaa
      481 ccggtcattc agtttccttg gaaggtccaa tattacatga agaattaagt tgtttagtaa
      541 ttaatccaat agcttcaatt aataaattac cgtctatagt tgtaccacct gaggagattg
      601 aaatttccag taatcataaa ttagatttaa taattgatgg tcaagataga tttttgattg
      661 aagaaaacga taccattaaa atatctatat ttcctatcaa ggctcgtttt attaggctaa
      721 taaaaaaagg ctttagacaa cttgaaaaat tgggattctg atattttcat tttagattct
      781 agtgcttttt atgcagggtt ttatcgatca atcaatttga agttttatac cacgacaact
      841 attatgaaag agattaaaca tatattaaat acatctttaa cactggactt gttaatttca
      901 tcaggagttt tagttataca agatccagtt atagaatcaa ttaataaaat aattaatact
      961 gcacatcata caggtgatat caaaaaacta tcaaaagctg atatctctat tctatcttta
     1021 gcttatcaaa tgaataagac tttagtatct gatgattatt ctattcaaaa tgttgctaaa
     1081 tttcttggaa ttaagaccat ttctttaggt aatgagggca tagtaaaatt acgaaaatgg
     1141 aagaattttt gtaaaacttg tagaaaacaa tatcccccaa atatcaaaga atgtacaatt
     1201 tgtggtaatc caacaaaaag aaaatataaa acattatctt cttatgttta ataatacatt
     1261 caacttactt aatagtgatt gctcaaaaca aacagaccaa tttataagaa ataattatta
     1321 tttattattg aaggagaatt ctataaaatt tactatgaga atattccagt taatttattt
     1381 atcacaagat aaacatgata ttgtcaatag ttgataagtt tatcagtttt caaaaataat
     1441 ttttcgttat tattaataat aattataatt ggaattggtt ttctatttat catatcttat
     1501 caatcttcag cttttactgc tgaggaaata aagaaaatag cagaagaaga tattagatcc
     1561 aatgccagaa ttcaagccta tgatttatct agaatacttg tacatagtct tgattcaata
     1621 aattctaatc taaaagtctt gacatcttcg ccttttcttt ttgagaatga tattgatcag
     1681 gttcaaaatc tactttattc tgcacaatca tctacacttc atataacaga tgcatattat
     1741 tggatagatg ttaacggcag aattgtaacc tctagtaaaa tctatcaaat tcctcaagct
     1801 aatgaaattt tagatactca aaatcaacct ttctttctta atcccaaaaa gacattaact
     1861 ccttattata gtacctcgat tacatcgaaa ggaagcccat cagcattttt atatatctct
     1921 tatccaataa ttaaacaaca gatagtacaa tctcaaaata gtacatacaa tgttaaacag
     1981 acctttaatg gagtacttgt agcagcaata agtgttaaat cattgggtac atttcttcaa
     2041 aatgagatga caacttctat tattggaaat gtaggattaa tggatagaga tggtgtcata
     2101 atatatgcaa gaaatcaatc actaattgga aataattata tgtcagatga atttcagtct
     2161 ctaataccta atgaccttag ggaaaattat aatagaatta taaaaaaagg tttagagggt
     2221 gaatctttcg cagaagacct aatatataat ggatcaacaa taacattatc ctacgaacca
     2281 attgtaataa atgagaaata tttatggaca ttat
//
LOCUS       DATIAS010000407         4246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1163535, whole genome shotgun sequence.
ACCESSION   DATIAS010000407 DATIAS010000000
VERSION     DATIAS010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4246
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163535"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VLA74_08225"
     CDS             <1..212
                     /locus_tag="VLA74_08225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50728.1"
                     /translation="YDWFNATTFLDYLKQIHRKFPKCYLFLDKAKQHYRSKKVLKYFA
                     DNRDSLIPVYLPTASPTEFMVLEEI"
     gene            complement(452..1258)
                     /locus_tag="VLA74_08230"
     CDS             complement(452..1258)
                     /locus_tag="VLA74_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50729.1"
                     /translation="MNKRTINLYAVIVMGFLSCMLLTILENNQHISQLFNSINSDNFK
                     EVLASTEENEEEVKDEESLEQKICNKLIESEKCEKMKEVKPLEKKELTEEEIKAEAII
                     NRYLEPVESEKKSSIDNSLSTETEIDSSNSLIGSSSSRNDSSTILSNEVESKDSTNLN
                     QQINSGFLSTQEVNQSSANKKSPDVSSTNTQNLNNLNQLQLVDLIASTISNANNIDKN
                     KVTQSLNDLIEPTKAKGINFIDSLKKIAEVILKDPLGNTANKIINIAKTK"
     gene            complement(1611..2135)
                     /locus_tag="VLA74_08235"
     CDS             complement(1611..2135)
                     /locus_tag="VLA74_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50730.1"
                     /translation="MGILTKLAEFFGRTSCQMLVKRTANEISISGLGIDIPGSKIDIG
                     SFSNKVIELVKATEVAVALDNSQYLLCKEISNMEDNNPLKDEYKKVRLQLLMAFNQLQ
                     GILASMRENSPEELKKELTNWIKYMSDLHKQSISLVGPQPKLIPKGGKSTLRKIMKYQ
                     GIDESELKSAIAKM"
     gene            2709..3542
                     /locus_tag="VLA74_08240"
     CDS             2709..3542
                     /locus_tag="VLA74_08240"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSF50731.1"
                     /translation="MPTGSALMIGLNSIDPTHYAGWKGHLTGCEYDAEDMTEVAKSKG
                     FDVKKLLTKDATVEHVENNLLHASQQLKPGDLFLLTYSGHGGQVPDTNNDEADFVDET
                     WCLYDRQFLDDELYYFLSRFKEEVRILVFIDSCHSGTVVRSSNTNKIDILNSNVDFDG
                     NRYKFAPQYILKKTFEEHQEIYNKIQLNSKLKNTKSKIKASTIMISSCQSNQFSRDGT
                     FNGLFTSNLLKVWNEGTFKGSYKRMHKAIIRQMPPDQTPQYIYTGKGNPVFIKQNPFT
                     I"
BASE COUNT         1551 a          584 c          593 g         1518 t
ORIGIN      
        1 agtatgattg gttcaatgca actacatttt tagactatct aaaacagata cataggaaat
       61 ttccaaaatg ttacctgttc ctagataaag caaaacaaca ctacagatca aaaaaggtac
      121 tgaaatattt tgctgacaat agagatagtt tgattcctgt atatctacca acagcatctc
      181 ctactgaatt tatggtactt gaagaaatat gacatatagc caagaacgat cttctagtcc
      241 tacgatacta ttcatctttt atagaattca gaaataaaat atcatcatat tttagaacaa
      301 aaagattcaa ttggatatga gaaactattt gcttgttaaa attggtaatt agaaaacata
      361 agctagttgg tataatacat aatgtttata gcgtggttaa gttggttatt atatctataa
      421 attcttaagt cagatattaa tttaaaaata tttattttgt tttagctatg tttattattt
      481 tattagccgt atttcctaat ggatctttta aaataacctc tgcaatcttt ttaagtgaat
      541 caataaaatt aatacctttt gcttttgtag gttctattaa atcattaagt gattgtgtaa
      601 ccttattttt atcgatatta tttgcatttg aaatcgtaga tgcaattaga tcaactagct
      661 gtaactgatt taaattgttt agattttgag tgttagttga agaaacatca ggggattttt
      721 tatttgcaga tgattgattt acctcctgtg ttgatagaaa tccactgttg atttgttgat
      781 ttaaatttgt actatctttt gattctactt catttgaaag tattgttgaa ctgtcatttc
      841 tactactact agagccaata agactattgc tgctatctat ttctgtttca gtactcaagc
      901 tgttatcaat tgatgatttt ttttctgatt cgactggttc taaatatcta tttataattg
      961 cctccgcttt aatctcctct tcagttaatt ccttcttttc taatggttta acttccttca
     1021 ttttttcaca tttttctgat tctatgagtt tattgcaaat cttttgttct aacgactctt
     1081 catcttttac ttcttcttca ttctcttccg tacttgccaa gacttctttg aaattatctg
     1141 aattaataga gttaaataat tgagatatat gttgattatt ttccagaatg gttaatagca
     1201 tacaagatag aaaccccata acaattactg catatagatt aatagttctt ttattcaata
     1261 ttataataaa taataattag aagttatttt tattgattat gtttaaagat tttattgaaa
     1321 aggagatgta atatcacaaa gatgaaaata tccatattta ctctatcaat agatttgttt
     1381 aaagttatga ttaaatcatt ttacgtgaag aaaaaatatt attataaaaa aacaaaaaaa
     1441 tttgaataat aaatttgatt cttaaatctt attatttcga caggttcata tctgcttggc
     1501 cccttttact aaacgggttc atatttcaaa taacaagatt ggttatataa tttcttaaaa
     1561 tatataaaaa tttcatatat taaagtggcc aaaattaatc tttgaattat ttacatttta
     1621 gcaatggctg atttaagctc actctcatct attccttgat atttcataat ctttcttaac
     1681 gtagactttc caccttttgg tatcaattta ggttgtggtc ccactagcga tatgctttgt
     1741 ttatgtaggt cactcatata ctttatccaa tttgtaagtt ctttttttaa ttcttctggt
     1801 gaattttctc tcatactagc cagaattcct tgaagctgat taaatgccat tagaagttgt
     1861 aatcttactt ttttatattc atcttttaat gggttattgt cctccatatt tgatatttcc
     1921 ttacacaata gatattgtga attgtcgagg gcaactgcaa cttcagtagc ttttactaat
     1981 tctattactt tgttagaaaa actcccaata tctattttag aacctggaat atcaatgccc
     2041 aatcctgaaa ttgatatctc gttagcagtt ctttttacta acatctgaca gcttgttctt
     2101 ccaaaaaact cagcaagctt agttaaaata cccataaata ataacaaaat cagtgattat
     2161 taaaggttta tatcgtctag gaacatatca aaagacttaa taatatcccg cctcatgaaa
     2221 tctatggata atgctaataa aatagcatta attataggta ttgaagagaa tgaaaaaatg
     2281 aaaccaataa attaatacga agtataaatt acaaaaatat gaatatatca aatactagac
     2341 aaatacatca aatatcgaat taattacatt agatatattg tttaattatt gtaaacttct
     2401 atatctatat ttaatttcat gtattttttt gttctcatat atattaaagc aaatattttt
     2461 ttctgattat atgatattat aagtaaatct gattagaaaa tataggctaa atggtatgat
     2521 atttttatat aggccaaaaa tatagtgtca aaaacaattc acacacctat gatttcatat
     2581 cttgtaaata actttaattt ttaaattaca aagatagcga taacaatagt gataatataa
     2641 taattaataa caattaaaac ttatttggat gtaaataaat ataaaagtat aaaaattatt
     2701 ataaaaatat gccgacagga tcagcactga tgattggatt gaattctatt gatcctactc
     2761 attatgcagg atggaaaggt catttaactg gatgtgagta tgacgcagaa gatatgactg
     2821 aagttgctaa atctaaaggt tttgatgtaa aaaaactact taccaaagat gcaacagtag
     2881 aacatgtcga aaacaattta cttcatgcat cacaacaact taaaccagga gatcttttct
     2941 tgttgactta ttcaggtcat ggtggtcagg ttccagatac aaataacgat gaagctgatt
     3001 ttgttgatga aacttggtgt ctgtatgata gacagttttt agatgatgaa ttgtattatt
     3061 tcttatccag atttaaggaa gaagtaagaa ttttggtttt tatagatagt tgtcatagtg
     3121 gaactgttgt aaggtcaagc aataccaaca aaattgatat acttaattca aatgttgatt
     3181 ttgatggcaa tagatacaaa tttgcaccac agtacatact taaaaaaaca ttcgaggaac
     3241 atcaagagat ttataataaa attcaattaa atagtaagtt gaagaataca aaaagcaaga
     3301 taaaagcatc cactataatg atttcgtcgt gtcaatctaa ccaattctca cgggatggca
     3361 catttaatgg tctttttaca tctaatttat tgaaggtatg gaatgaagga acatttaagg
     3421 gatcttataa aagaatgcat aaagcaatca ttaggcagat gcctccagat cagacccctc
     3481 aatatatata cacaggaaaa ggtaatccag tttttataaa acaaaatccg ttcacaattt
     3541 aaattttata ttcaattaat tttgcataat gtaaaataat tttatagttt gaagaaaaaa
     3601 ggtttacaca tagatataaa atacaatatt ataccaatta gcataaatac actgacttta
     3661 ttttactatc agataataca ttttatatag caatagctat tagctagctg ttgtacttac
     3721 taacatgggt tacaatttca tttacacaca tgggtaacac tttctagtag tctgctagta
     3781 ggaagtgtat aatcaaaata gaatcacaaa caaaatttaa tttaattcat gagaaagaat
     3841 ggactggaga tactgttact gatatctgca tacgatatca gatatccaga aagatatact
     3901 acaaatggaa gaacaggtac ataaagtatg gaatagatgg tctacaggat agaagtagaa
     3961 aaccatacaa tatacaacca agaaaagtaa caaatgatat agaacaagaa atactggatt
     4021 tacgtacaac aaacaagaag atttggatgt aatcgtatta gattcaggtt aaagcgtcta
     4081 aaggagatat cactcagtac taaaaccata tacaagatac tgaaaagaca tggtttgaat
     4141 accctggaat gtaagatcag aaatagaaaa tacaaaagat ttgcaaagga aaaacccact
     4201 caaatggtac agatggacat tttaggacca ttttaccttg agaatt
//
LOCUS       DATIAS010000408         7076 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1436467, whole genome shotgun sequence.
ACCESSION   DATIAS010000408 DATIAS010000000
VERSION     DATIAS010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7076
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1436467"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(403..1923)
                     /locus_tag="VLA74_08245"
     CDS             complement(403..1923)
                     /locus_tag="VLA74_08245"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSF50732.1"
                     /translation="MTYLGNSINIAGKNRFLTSNLMFSTAEYFIENSSSSDTSNINTA
                     INELESNILTLKHGGKISDIDLKPLPSEFSKDWDSIHQKWIFLKTILSNNILKQNQII
                     SPVVVGEVISEATTISSSTTSLSSEIEIDKILKTILETGALPLITSSDILVTKLGEHS
                     KDRSQYSILLYILFAILNIGVTAAFVLYLVRKILKPILVLTIATSEVKRGNLNVVIKN
                     KGNGDELSVLTESFNSMVTSIKNYINKQNELKKELEKANEELKYRDQLKDEFINVAAH
                     ELKTPIQPILGLCEVLRDRETNIEKDEEILDIIIRNSKRLLKLAEDILNVARIESGSF
                     FLKKEKFDLKKMITEILRDFEQKIVESKKNIKLAYEFYHNNNNDEIIVEADRNRLSQV
                     VYNLLNNAFNFTNEGSITVIVDGRKKDDINDNDEILVSIKDTGTGIHQEILPNLFTKF
                     ATKSSMTSGTGLGLFISKKIIEMHGGRIYAINNNIDDDGREVRGSTFTFSLPINNT"
     gene            complement(2671..3267)
                     /locus_tag="VLA74_08250"
     CDS             complement(2671..3267)
                     /locus_tag="VLA74_08250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50733.1"
                     /translation="MDLTLLLTQNITNNASDITSTNASTPSSSSQQLNPKYNTNNDVY
                     VDIDKELKPKLLENTKSFSVVKSGEKCIGIGKPCPIWIRAGFALEPNLDIIGNVASNT
                     SILILQGENESQTPLQQAFLLQQKLTEVKHPDHTLITYLNLGHVFYPSSEWQTDIGPI
                     EQYVLRDIYSWLEAHNGFTPLTTFSSSSYTSNTTKIKN"
     gene            complement(3230..4081)
                     /locus_tag="VLA74_08255"
     CDS             complement(3230..4081)
                     /locus_tag="VLA74_08255"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSF50734.1"
                     /translation="MKKPKVLMLTHNFQTLYSSSITIATLKVLLILSIILSFYSISFL
                     LYGNNFPLVLAQQDLETIKYRNMVIDLGDGIKTNAQLTIPAVGNGPFPGVLLIHGSGP
                     VDMNETLGIVRIDNETGTKIYPSARPFFQIAEYLSDRGFVTLRYDKRGIGGNFTILDT
                     NVWGNATTKDFKHDAEKALDILIQQPEVDANRITVLGHSEGTTIAPRVAIDNPDKVKN
                     IVLMGTLAQNFSKIAEFQGVSLPLLYVKEVLDHTHDGLLSLQEANKNPVFTTMVGPYS
                     TSHTKYY"
     gene            complement(4473..4862)
                     /locus_tag="VLA74_08260"
     CDS             complement(4473..4862)
                     /locus_tag="VLA74_08260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50735.1"
                     /translation="MSGGTRSKSSSKKSTKKITTTKEVKKETKSVPITVELNILKVLI
                     NERPLIPLFRILKKNKELHTRELLITMGSWGYGQSLLKRATNLGLIERKVKKNKSPGR
                     GKPRIYNSLTNKGREVVGLADKVGYAK"
     gene            complement(5011..6033)
                     /locus_tag="VLA74_08265"
     CDS             complement(5011..6033)
                     /locus_tag="VLA74_08265"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF50736.1"
                     /translation="MSSTTCHLTNIPSNEYIMLLYSSDDERNDAAVNYINNGLKSGYQ
                     CIYASINAYDSKSSSNISNLSSNIDNYKENIERDELGIVDFKPYYESALNVDFRPFKK
                     LKKKLEETLNHRKSEGKKDAILVFADAACFLSQNKQFEECEILEWWWNETTTEWRQNN
                     QNITVVCPHPGLVLNNPLLPDTKGRLNGTHTITIDLKQSIAENQKRKPKRILIAEPEP
                     DIRGLYSLFTKWYDFSISDISIVESGYKCLEILLSDTAEDDNNNYDIIILDTHLPDIS
                     GFQVARKIRDRLPDKKIILTTTHSLNNISNMIESIGIKTQDVILKPFLFSELFSILKE
                     LRMSYN"
     gene            6424..>7076
                     /locus_tag="VLA74_08270"
     CDS             6424..>7076
                     /locus_tag="VLA74_08270"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSF50737.1"
                     /translation="MDNNNDNRNKKFNNFSLNPFIVTSMASWQQSATMWMEIYKEFAA
                     RSQKIYESWSDALWKTCTNEENLQSRENVSLQGHIDNNNNTNKNNKKKMRALVLQGGG
                     SVGAFQAGAFKALYEKITREDKENGNEGRPLFDIIAGTSIGAINAAVLVSHVVENKTW
                     KGSSEKLVEFWKYLSCPTPDITKMSANWKKEHDKNNPNAASAEAARRYYSVKEFLKSG
                     "
BASE COUNT         2318 a         1021 c         1072 g         2665 t
ORIGIN      
        1 gtattccgta aactgagacc aagaaaatac agataaagag aatacataac aataaagatg
       61 agggttctgt ttctctcaaa tctaattttc atatcataaa tagaacgtgc ctagctatag
      121 cttttactgc ttaacttaac aaagcctatt gttcaaagat attatagtaa tataattcct
      181 tatctcacta ttatctatat ataattttta actagttcta ttaaactatt agtaggaatt
      241 attcttatgt tacaataaca aaaaaatttt ttgataccga attatatttt gtaagattga
      301 tttattaaga ttataaaaat ctataattaa aaagtgatat ctgttttgtg tataatcgtg
      361 gatattaagt caaataaatt tagaaaataa catttagata ttttaggtat tattaattgg
      421 aagactaaat gtaaatgttg atcctctaac ttctcttcca tcatcatcaa tattattatt
      481 tatagcatat attctgccac catgcatttc aattatcttc ttggaaataa ataatcctaa
      541 gcctgtacca cttgtcatag aggatttagt agcaaatttt gtaaaaaggt ttggcaatat
      601 ctcttgatgt atacctgttc ctgtatcttt tatactaact agaatttcat cattatcatt
      661 tatatcatct ttttttcttc catcaacaat aacagtaata ctaccttcat ttgtgaaatt
      721 gaaggcattg tttaacaggt tataaactac ttgactaagc ctatttctat cagcctctac
      781 aattatttca tcattattgt tattatgata gaattcataa gccaatttta tattcttttt
      841 actttctaca atcttttgtt caaagtctct taaaatctca gttatcatct tttttagatc
      901 aaatttttct ttctttaaaa agaaagaacc actttcaatt cttgcaacat ttaaaatatc
      961 ttctgcaagt ttcaatagtc tttttgaatt cctaataata atatccaaaa tttcttcatc
     1021 tttttcaatg tttgtctccc tgtctcgaag tacctcgcag agtccaagga ttggttgtat
     1081 aggagttttt agttcatgtg ctgctacgtt tatgaattca tcctttaatt gatctctata
     1141 ttttagttct tcatttgcct tttcaagttc cttttttaat tcattttgtt tattgatata
     1201 gttttttata gaggttacca tagaattgaa tgattctgtt agaactgaaa gttcatcacc
     1261 attaccttta tttttaatta ctacgttaag atttcctctt tttacttcag aagttgcaat
     1321 agtgaggaca agtattggtt ttaatatttt tcttacaaga taaagtacaa aagcagcagt
     1381 aactccaata tttaatatgg caaaaagtat gtataataat atagaatatt gtgacctatc
     1441 ttttgaatgt tctcctaatt ttgtgaccaa tatatctgag gaagttatta aaggtaatgc
     1501 tcctgtttca agtattgttt ttaaaatttt gtctatttct atttctgatg ataatgatgt
     1561 tgttgatgat gatattgttg ttgcttctga tattacttct cctactacta ctggactaat
     1621 tatttgattt tgttttaaaa tattatttga taatattgtt tttagaaaaa tccatttttg
     1681 atgtatacta tcccaatcct tagagaattc agatggcaat ggttttagat ctatatctga
     1741 tatctttcct ccatgcttta atgtcaatat gtttgactct aattcattta tcgcagtatt
     1801 aatgttagaa gtatcactac tactactatt ttctataaaa tattctgcag tactaaacat
     1861 aagattagat gtgagaaatc ggttcttacc tgcaatattt attgaatttc ctaaataagt
     1921 catttgtgat tggtaataag aaagtataac taaactaata attataaaaa aaatttgaat
     1981 aaaaactagt atccctatct ttaaacctat tttagaatgt atgaatttta aagtattatc
     2041 ataatacttt gacatgacta tatatatgga aggatatatt tgtgcatatt catttctcat
     2101 ttgataaatg gactatttga atattaaaaa taataattat attaaatatt gatattaatc
     2161 tggaacaata taatactagc gtgcttctag tgagttgagt ttatttaaat ctttaattgt
     2221 tttgacttta tgcgttttca attggtttac tttcagggtt aggattttca gtcgttttct
     2281 tgctttttct aaaccttttc cacaaatctt ttagaggcaa tagatattat aaggtaaaag
     2341 taacttaaag gattttgggt gtcatacaga ggctaccata tataacaccc gaatgatatc
     2401 gttttgaaac tgttgtttta gtagcaaaaa taataaatca aaagataaaa aattttattt
     2461 atgcaggcca caaacacttt atgtcttatt tccatttttc tatcttgaga tggtgagccc
     2521 tagaaaagta cgggcccgtc gggagtaata ccgatagcgg ttctaaaaga ggagtccaat
     2581 gtagatatac taaaaactta tatatagctt ttattattgg aacttaattt ttgaaaaatt
     2641 cagaaaaata aaatttgaga atttttagct ttaatttttt attttagtag tattagatgt
     2701 ataggaagat gagctaaaag tagttagagg tgtaaaccca ttatgagctt caagccatga
     2761 ataaatgtcc ctcaatacat actgttctat tggacctatg tcagtctgcc attcagatga
     2821 aggatagaat acatgcccaa gatttagata tgttattaat gtatggtcgg ggtgttttac
     2881 ttctgttagt ttttgctgta aaagaaacgc ttgctgtagt ggagtttgtg actcattctc
     2941 gccttgaagt attaaaatac tagtattaga agcaacattg ccaattatat ccaaattagg
     3001 ctccaaagca aatcctgctc ttatccaaat aggacagggt ttacctatac caatgcactt
     3061 ttcacctgat ttcacaactg aaaacgattt agtattttct aatagtttag gtttaagttc
     3121 cttatcaata tctacatata catcattgtt tgtattgtat ttgggattca gttgttggga
     3181 ggatgatgat ggtgtggatg cattggtaga ggtaatatca ctagcattat tagtaatatt
     3241 ttgtgtgaga agtagagtaa ggtccaacca tagtggtgaa aacaggattc ttatttgctt
     3301 cctgtagtga caataatcca tcatgagtgt ggtctagtac ctctttaaca tatagaagtg
     3361 gcaggcttac tccttggaac tccgctattt tgctgaagtt ttgggctaat gttcccataa
     3421 gtacaatatt ctttacttta tctggattat caatggcaac tctgggtgct atcgttgtac
     3481 cttcactatg acctaatact gttattctat tagcatcaac ttcaggttgt tgtataagaa
     3541 tatctagagc cttttctgca tcgtgtttaa aatctttagt tgttgcattt ccccaaacgt
     3601 tagtatccaa tattgtaaaa tttccaccta tacctctttt gtcatatcga agtgttacaa
     3661 atccacggtc tgatagatat tctgctattt gaaagaatgg tctagcagat ggatatattt
     3721 ttgtgcctgt ttcattgtca atacgaacaa tgcctaaagt ttcattcata tctacaggac
     3781 cagacccatg aataagaaga acgccaggaa atggcccatt cccaactgca ggaatggtta
     3841 gttgtgcatt agtctttatt ccatcaccca aatctattac catgtttcta tattttattg
     3901 tctccaaatc ttgttgagca agaacaagag gaaaattatt accatacaat aggaaagata
     3961 tagaataaaa agaaagaatt atggataata tcagtaatac tttcaatgtt gctattgtaa
     4021 tagaagaact atataaggtt tggaagttgt gtgtgagcat taatacttta ggctttttca
     4081 aatgtgaagt ataatttgag gattgttcac agagtgattt ttgactaaat cataaaaatg
     4141 aacacactta ttatgaaacc cgatttgaac tcattattat tactgtttat ggatttaatt
     4201 gtaaataaga aatgaaccat atttgacttt tctaaatgtt ccacaattgt taaaatatag
     4261 atatgatttg ttgcagttat aatagattta ttatttattt aatagataaa gtagatgaac
     4321 ccgagaaaac tatgggtccg tcgggagtga gtaataccga tagcggttct aaaataagag
     4381 tctaatacta tagtagtaaa tatttaatat ttaggtattt tttcaaaatt cttattctct
     4441 attttaagtc gttaactttt aaaattaaaa aattactttg cgtatcctac tttatcagct
     4501 aatcctacta cttctctacc cttatttgtt aaagaattat aaatcctcgg tttgcctcgc
     4561 ccaggagact tatttttttt tactttcctt tcaatcaaac ctaaatttgt tgctcttttc
     4621 aataaggatt gtccatatcc ccaacttccc attgtgataa gtaattctct tgtgtgcaac
     4681 tctttgttct tttttagtat tctaaataat ggaataagag gacgttcatt tatcagaact
     4741 ttaagtatgt ttaattctac ggtgatagga actgattttg tttctttttt tacttccttc
     4801 gtagttgtga tttttttagt agacttttta gaagaacttt ttgaacgtgt accaccagac
     4861 atattattta gattaacgtt tataaattat aaaaacttat ttttattaat atcagataaa
     4921 ttttctaata aggaactcgt taacgaatga aaattattgg catttgattc tgatttgtta
     4981 atgatggttc atcagttgtt gtaaataaga ttagttgtat gacattctta gttcttttaa
     5041 aatagaaaat aattcagaaa acaaaaaagg ctttaaaatt acatcttggg tttttattcc
     5101 aatcgattct atcatattgc ttatattatt taatgaatga gttgtagtta atattatttt
     5161 tttatctggt aatctatcac gaatttttct agcaacttga aagccagaaa tgtcaggaag
     5221 atgggtatct agtataatga tatcatagtt gttgttgtcg tcttctgctg tatcagaaag
     5281 taaaatttct aaacatttgt atccactttc tactatacta atatcggata ttgaaaaatc
     5341 ataccatttt gtaaaaagag agtaaagacc tctaatatct ggttctggtt cggctattag
     5401 aattcgttta ggttttctct tttggttttc tgctatggat tgttttaaat caatcgttat
     5461 tgtatgcgtt ccattaaggc gacctttggt atcaggcaat aaaggattgt taaggactag
     5521 tccagggtga ggacatacta cagtaatatt ttgattgttt tgcctccatt ccgtcgtagt
     5581 ttcattccac caccattcta atatttcaca ttcctcaaat tgtttattct gtgataaaaa
     5641 acatgctgca tctgcaaata ctagtattgc atcttttttg ccttcagatt tacgatgatt
     5701 cagagtttct tccaattttt tctttagctt tttaaaagga cgaaaatcta cattaagtgc
     5761 tgactcgtaa taaggtttaa aatcaacgat acccaattca tctctttcaa tattctcttt
     5821 ataattgtct atattagaag ataaatttga gatattcgag ctacttttac tatcatatgc
     5881 gttgatagat gcataaatac attggtatcc actctttaat ccgttattaa tgtaatttac
     5941 agctgcatca ttacgctcat catcgctgct atatagtaac attatatact catttgatgg
     6001 aatatttgtt aaatgacaag tggtggatga catggatata gggataatta acattctctg
     6061 caacgtatat ataaattata gagaattgaa ttgagactct atattcaatt tcaataggta
     6121 ttgtaattca catactttta gtttataaaa attttaaatt tgtatatgta aaaaatttca
     6181 agaataacat ttagaatgaa taatattcta tattgataat actctctcat ttttttgtta
     6241 taatatctca gttacaaaat acattataga gggagccagt gggatatgaa tcaaatttga
     6301 ctcgtttttc ccacccagaa aattatgtat agggcttatc ctctgtttat ctaaactaga
     6361 ctatgatatt gcagtaatta tgattataac tgttaataag catagatacc acctcattaa
     6421 tgaatggata ataataatga taacagaaat aaaaaattca ataacttctc acttaatccc
     6481 tttattgtga cgagtatggc ttcatggcaa caatctgcca caatgtggat ggagatatac
     6541 aaagaatttg ctgcacgttc tcagaaaata tatgaatcct ggtcagatgc tctttggaag
     6601 acatgtacaa acgaagaaaa tcttcaaagc agagaaaatg tatcattaca gggtcatata
     6661 gataataata ataatacaaa caagaataac aaaaagaaaa tgagggctct tgttctgcaa
     6721 ggaggaggat cagttggagc gtttcaagct ggtgctttca aagcattata cgaaaagatt
     6781 acaagagaag acaaggaaaa tggaaatgaa ggaaggccat tatttgacat tatcgctggt
     6841 acttcaattg gtgcaataaa tgctgctgta ttagtaagtc atgttgttga gaataaaaca
     6901 tggaagggtt catcagaaaa actcgtagaa ttttggaaat atctatcttg tcctactcca
     6961 gatattacta aaatgtctgc taattggaaa aaagaacatg ataaaaataa tcctaatgct
     7021 gcctcagcag aagctgccag aagatattat tcagtaaaag aattcttgaa gtcagg
//
LOCUS       DATIAS010000409         6987 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_347175, whole genome shotgun sequence.
ACCESSION   DATIAS010000409 DATIAS010000000
VERSION     DATIAS010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6987
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347175"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1436
                     /gene="lysS"
                     /locus_tag="VLA74_08275"
     CDS             <1..1436
                     /gene="lysS"
                     /locus_tag="VLA74_08275"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0017101 - aminoacyl-tRNA synthetase
                     multienzyme complex [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HSF50738.1"
                     /translation="IGLALNNLGFKSELITYSDDMDGLRKIPTGFPPWLDDYIAKPVS
                     TIPDPFGNCHKSYGEHMSSLLLESLDKVGIKFNYKSASDVYKSGILGREIHCILSNNE
                     LLGKKISNLVGQDKYIDVLPYFPVCNNCGRLYVARAEKYLSNERKVLYSCSGSKIGTK
                     ELSGCGHKGESDISKGEGKLAWKVEFAARWKALDIRFEAYGKDIMDSVRVNDWVSTSL
                     LNFPHPLHVKYEMFLDKGGKKISKSAGNVLTPQMWLKYGTPASILLLLFKRISGTRHI
                     GLDDIPTLMDEYDYYEDIYFDKIKENNNSKKIKLKGIYEYVNKLNPPYNSLKHIPYRI
                     LVQQASLFTGAGRSDNIFSRLKKYRLVEEKTEDLINKISLASNWADELISENAFEISI
                     EQKEKNAVMELVNKFKDLIGKESENLSNDIQTIIFEITKKYEIEPRVFFKLLYRMLIN
                     CDRGPKLGNYLVDLGLDRTCEIMEKYI"
     gene            complement(1552..2616)
                     /gene="purM"
                     /locus_tag="VLA74_08280"
     CDS             complement(1552..2616)
                     /gene="purM"
                     /locus_tag="VLA74_08280"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HSF50739.1"
                     /translation="MAKAFINSYTKAGVNVKKIHSVQENIGKMITESNSYQNIGKILS
                     GFGHYSGLIKLGNNVIALHTDGVGTKVLICQKMNCFDTIGIDCIAMNVNDIICTGAEP
                     FAFVDYIALKSANEKLVKKLLKGLVSGAKVSRVAIVGGETAVVPEILSGESDDAFDLA
                     GTAIGLTAPDRLILGNNIRTGDVILGIESNGLHSNGFSLARKVLSKYSIDDIPRFLTK
                     PIGEELLSPTRIYVRPIMELIRDKKISVHGLAHITGGSFTKLKRLNNKVRFNLSKLPK
                     IEGIFKQIQSDGKIDVKEMYRTFNMGIGFCLIMPKNSVDKSTSIVEKHKMRVFDIGEI
                     DSSGIGNVVGKINGKKHIFA"
     gene            2818..3600
                     /locus_tag="VLA74_08285"
     CDS             2818..3600
                     /locus_tag="VLA74_08285"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF010587.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HSF50740.1"
                     /translation="MDFEEIVIRISQFIKEEVKSSNTKGVVLGLSGGIDSSVAVYLAT
                     KAIDTKDIIGLIIPDTDVTSQKDIEDALSISRILNIRYRLIDINDLKQNYTKLLPENQ
                     LSIGNLTARIRMNIIYYYANLNNLLVIGPSDKSELRIGYFTKFGDGAADIFPLGDLYK
                     TEVRELGKYLNIPSSILNKKSSPSLWKGQSAEEEIGMKYSKIDNILKFLEKENMMDIS
                     RNKYNHDLPPGIGFDIKDLLFIQNLISKTNHKRNLPKICFLK"
     gene            3697..4506
                     /locus_tag="VLA74_08290"
     CDS             3697..4506
                     /locus_tag="VLA74_08290"
                     /EC_number="2.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020266229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate
                     synthase"
                     /protein_id="HSF50741.1"
                     /translation="MSFNPMVSGRDIRINRITKDGKMLCIPMDHGITDGPIKGLEDAH
                     GMIYQCENSGLTSVIINKGILKSMARPVNIGLITHLSASTSLGPCPNKKVLMGSVEEA
                     IRLGSDAVSVHVNIGAKEEPEMLEILGMISDECQLWNVPLLAMMYPRGENVKNPYDPN
                     VVAHVTRIGAEAGADIVKSVYTGDIDSFKSVIKSCPVPVVIAGGPKAKTDLDILEMCS
                     SAIKAGAMGVTFGRNIFQHRDPPSIVRALHEIIIKEKNPKEVLRNLGKNER"
     gene            4487..5557
                     /locus_tag="VLA74_08295"
     CDS             4487..5557
                     /locus_tag="VLA74_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase II"
                     /protein_id="HSF50742.1"
                     /translation="MEKTKGKELIIKPTVNDSDLKNFLDAIISMNGINLFYIDPLLNH
                     SQNFKTIYESDAADIIICQTHALLQKNKESGKFLAYYKKVLSNSDIVDIQTAESLGAN
                     YVIIDTADWKIIPLENIIANLQNTNTKIITMAKNSGEVRTMFSVLELGVDGVILSTGN
                     LDEIKESKRYLEKKNVAIQSCEIIEVKDVGVGERVCVDTVSILEKGEGMLVGSKSNFM
                     FLLHNESSGSSFTSPRPFRVNAGAVYCYTVLPNGTTKYLSELESGSEILIVNREGNSR
                     VVSVGRCKIETRPLTLIKAIADGIEGTVIVQNAETIQFIHENGDLLPVTSVKKGDKVL
                     GFLKQATGRHFGMEVDEFILEK"
     gene            5723..6589
                     /locus_tag="VLA74_08300"
     CDS             5723..6589
                     /locus_tag="VLA74_08300"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HSF50743.1"
                     /translation="MRIKNYVDKILSGDCKEIISKLPSNSVQLTITSPPYRNAIDYNA
                     HVSKNGSYYRGKSNTDTQEYLNEMISLFNDKIFNATKEGGYCCIVIANEVVNGTLLAL
                     PHMVLSQLVEPFGNWNLHEEIIWHKVTGGTNRYGSFVINPYPKYYRANIMHEFILVLR
                     KGNVNSGRTERKETLPATHEEWTKEIANSVWHIAPIPPGYIDHPCPFPEEIPYRLMKL
                     YSYVGDLILDPFNGSGQTTKVAFHLQRHFVGVDIINDYVKLARSRLSEPIHIRSEALI
                     ANWKKVRSHHNI"
     gene            6773..>6987
                     /locus_tag="VLA74_08305"
     CDS             6773..>6987
                     /locus_tag="VLA74_08305"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF013640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HSF50744.1"
                     /translation="MTKICVSLAPTSLQQLKHLLEKALYLADFFEIRFDYLDTSEIAN
                     AMKIVYPFKSKSVFTIRSNAEQGKFSG"
BASE COUNT         2404 a         1050 c         1205 g         2328 t
ORIGIN      
        1 ggatcggttt ggcattaaac aatcttggtt ttaaatctga attaataaca tattcagatg
       61 atatggatgg attaagaaag attccgaccg gtttcccacc ttggcttgat gactatattg
      121 caaaacctgt ttcaacaatt cctgatccgt ttggaaattg tcacaagtca tatggtgaac
      181 acatgagtag tcttctttta gaaagtctag ataaagtggg tatcaaattt aattataaaa
      241 gcgcctcaga tgtgtataaa agtggtattc ttgggagaga aattcattgt attctcagta
      301 acaatgaact actgggaaaa aaaatatcca atcttgtagg tcaagataaa tatattgacg
      361 tgttacctta ttttccagta tgtaataatt gtgggagatt gtatgttgca cgtgctgaaa
      421 aatatttgtc caatgaacgc aaagtacttt attcttgttc tggtagtaaa ataggaacaa
      481 aagaattatc ggggtgtggg cataaaggag aatctgatat ttctaaaggt gaaggaaaac
      541 tagcttggaa agttgaattt gcagcaagat ggaaagcatt ggatatacga tttgaggcgt
      601 acggtaagga tattatggat tcggtacggg taaatgactg ggtatctact tctctattga
      661 attttccaca tccactccac gtaaaatatg agatgtttct ggataaggga ggtaaaaaaa
      721 ttagtaaatc agctggtaat gttttaactc ctcaaatgtg gttgaaatat ggtacgccgg
      781 cgtctattct attattatta tttaagagga tttcaggaac tagacacatt ggattagatg
      841 acattccaac actaatggac gaatatgatt attatgagga tatttatttc gacaaaatta
      901 aggaaaataa taattctaaa aagattaaat taaaaggaat ctatgaatat gttaataagc
      961 ttaatcctcc ttataatagt cttaaacata taccgtacag gatattagta caacaagcgt
     1021 cgctttttac cggtgcggga cgatctgata atatcttttc aaggcttaaa aaatatagac
     1081 tagtagaaga aaaaacagaa gatttaataa ataaaataag tcttgcctcg aattgggctg
     1141 atgagttgat ttcagaaaac gctttcgaaa tttccatcga acaaaaagaa aagaatgctg
     1201 taatggaatt agtgaacaaa tttaaggatc taattggaaa agaaagcgaa aatctgtcaa
     1261 acgacataca aaccatcatt tttgagataa caaaaaaata tgagattgaa ccacgtgttt
     1321 tcttcaagtt actctatcgg atgttgataa attgcgatcg aggtcccaaa ctaggaaatt
     1381 atcttgttga tttaggattg gataggacgt gtgaaattat ggaaaaatat atttgatatt
     1441 gtcaaatacc cgttataaca tctctatatt tttagctata tcttaatgat ttttaagaat
     1501 aaattggttt gaatagttaa tgcaatgtgt ttaattatta ggaacataaa cctatgcaaa
     1561 tatatgtttt tttccattta tctttccaac tacattacct attccactag aatcgatttc
     1621 tccgatatca aataccctca tcttgtgttt ttcaactatg cttgtcgact tatctacaga
     1681 attcttgggc ataatcaaac agaatcctat ccccatattg aaagttctat acatttcttt
     1741 cacatcaatt tttccatcac tttgaatctg tttaaaaatt ccctcaatct tcggaagttt
     1801 tgaaaggttg aatcttactt tgttatttaa tctttttaat tttgtaaagg atcctcctgt
     1861 tatgtgtgca agtccatgga cagatatttt tttatctctt atcaattcca ttataggtct
     1921 aacataaatt ctagttggag aaagtaattc ctctccaatt ggttttgtta agaatcttgg
     1981 aatatcatct atcgaatatt ttgataatac tttccttgcc aatgaaaaac catttgaatg
     2041 taatccattg ctttctatcc ctaatatcac atctccagtt cgtatattat tgcctaaaat
     2101 taatctatca ggagcggtta atcctatagc agttccagca aggtcaaatg cgtcatctga
     2161 ttctccagat aatatctctg gaactactgc agtttcaccc cccacgatcg caactcttga
     2221 aaccttagct ccgctaacta atccttttag tagttttttg actaattttt cgtttgcaga
     2281 tttaagtgca atgtagtcaa caaatgcaaa tggttcagct cctgtacaaa taatatcatt
     2341 aacattcatt gcaatacaat ctattcctat tgtgtcaaaa caattcattt tttggcatat
     2401 gagtactttg gtacctactc catcagtatg gagcgctatt acattatttc caagtttaat
     2461 taatccagaa taatgaccaa atccacttaa tattttccca atattttggt aagaatttga
     2521 ttctgtaatc atttttccta tgttttcttg taccgaatgt atttttttta cgttcacacc
     2581 tgccttagta tacgaattaa taaatgcctt ggccaaagat gttatactta ttttctatca
     2641 ctaattaaaa ttttttattt ttaccttctg tccattagtt caattattaa tatcacctta
     2701 tcgagagttt gattatactt tatttcttgt tagagaattc tctttattac atttaaacag
     2761 atttatctaa aattagatct atttaataat catgtcatta ttcctatttc aataacgttg
     2821 gactttgaag agattgttat tagaatttct caatttatta aagaagaagt aaaaagctcc
     2881 aatactaagg gcgttgtttt aggattaagt ggcggaattg attccagtgt tgctgtttat
     2941 ttagcgacta aagctataga cactaaagat attattggtt taattattcc ggatacagat
     3001 gttacatctc aaaaagatat tgaggatgct ttatctatat caagaatact aaatatacgt
     3061 taccgtttaa tagatataaa tgatctcaaa caaaattata ctaaactttt accagaaaat
     3121 caactatcga ttggaaatct aaccgcacga attcgtatga atataattta ttattatgca
     3181 aatctgaata acttactagt aattggtcca tctgataaaa gtgagctacg gataggatat
     3241 tttactaagt ttggtgacgg tgcagctgat atatttccat taggcgatct ttataaaact
     3301 gaagtacgtg aattgggaaa atatttaaac attccttctt ctatcctaaa taaaaaaagt
     3361 agtccatctt tgtggaaagg tcagtcagca gaggaagaga ttggaatgaa atattctaaa
     3421 atcgataaca ttttgaaatt ccttgaaaaa gaaaacatga tggacatatc aagaaacaag
     3481 tataatcatg atcttccacc aggaatagga ttcgatatta aagatttgtt atttattcag
     3541 aatttaattt caaaaacaaa tcataagaga aatctaccaa aaatctgttt cttaaaataa
     3601 tggttgatta gattatttta taatatgttg aaagatactt aatgttgatg attttctaat
     3661 ttaagaaatt agtagattac tttaagtagc tcaattatgt ccttcaatcc tatggtctct
     3721 ggaagagaca ttcgcataaa ccgaattaca aaagatggaa aaatgttatg tattcctatg
     3781 gatcatggaa taactgatgg ccccataaag ggtttggaag atgctcatgg tatgatttac
     3841 caatgtgaga attctggatt aacttcagta attattaata aaggaatcct caaatccatg
     3901 gcaagacctg taaatatcgg tttaattact catctttcgg ccagtacttc tttaggtccc
     3961 tgtccaaata agaaagtctt gatgggaagt gttgaagagg cgatacgttt aggttctgat
     4021 gcggtctctg ttcatgtaaa cataggcgca aaggaggaac cagaaatgct ggaaatcctt
     4081 ggaatgattt cagatgagtg ccaattgtgg aatgttccat tgttagctat gatgtaccca
     4141 agaggtgaaa acgtaaaaaa cccttatgat ccaaacgtcg ttgctcacgt tactagaata
     4201 ggagcagaag caggcgctga tatagtaaag tcggtataca cgggagacat tgattcattt
     4261 aaatctgtca taaaaagttg tccagtacct gtggtgattg ctggtggtcc aaaagcaaaa
     4321 actgatttag acattcttga aatgtgttca agtgcaatta aagcaggtgc aatgggtgta
     4381 acttttggca gaaatatttt tcagcacaga gatcccccat caatagttag agcattacat
     4441 gaaattatta ttaaagagaa aaatcccaaa gaggtattaa gaaatcttgg aaaaaacgaa
     4501 aggtaaagaa ctgattatca aacctacagt aaatgattca gatcttaaga acttcctaga
     4561 tgctataatt agtatgaatg gtataaactt gttctatatc gatccattat taaatcacag
     4621 tcaaaatttt aagacgattt atgaatctga tgctgctgat attataatat gtcaaacgca
     4681 tgctctcttg caaaagaata aagagtcagg taaatttcta gcatactata agaaagttct
     4741 ctccaatagt gatatcgtag atattcagac tgcagaatca ttgggtgcga attatgttat
     4801 cattgacaca gctgattgga agataattcc attagaaaat attatagcaa atcttcaaaa
     4861 cacaaacacc aagataatca ctatggcaaa aaattctggt gaagtaagga caatgttttc
     4921 tgtattagaa ttgggggtcg atggggttat actctcaact ggaaatctgg atgaaataaa
     4981 ggaatctaaa agatacctag aaaagaagaa cgtcgctata cagtcatgtg aaatcatcga
     5041 agttaaggat gttggagtcg gagagagggt ttgtgtcgat actgtttcta tactagaaaa
     5101 gggagaagga atgttagttg gtagtaagtc aaactttatg ttcctattac ataatgaatc
     5161 ctcaggatca tcatttacat caccacgacc tttcagagta aatgctggtg cagtctattg
     5221 ttatacagtt cttccaaacg gcacaaccaa atatctgtct gaattagaat cgggctcgga
     5281 aatccttata gttaatagag aaggtaattc gagggtagta tctgtgggta gatgtaaaat
     5341 agaaacaaga cccttaacac taattaaagc tattgctgat ggtatagagg gtactgttat
     5401 tgtacaaaat gcggaaacta ttcaatttat acatgaaaat ggagatctgc ttccagtgac
     5461 ttctgttaag aaaggtgaca aagtattggg tttcttaaag caagcaaccg gtagacattt
     5521 tggcatggaa gtggatgaat tcattttaga aaaatagttt atttattgtt taacaaaatt
     5581 atctttttat tggatagtga taatattggt aaacattcca tttataataa aagtacaact
     5641 ggatttaaag ataaaaatta ttgatcttct ggtcgataat tttaaagtat tctgaatatt
     5701 gagggtaatt acatttttta ttatgcgtat taagaattat gtcgataaaa ttttatcagg
     5761 agattgtaag gaaattatat ctaaacttcc ttctaattca gtacaattaa ctattacttc
     5821 tccaccgtat aggaatgcca tagattataa cgcacacgtt tcaaaaaatg gttcatacta
     5881 tagaggaaaa agcaacacag atactcaaga atatctaaat gaaatgatat ctctttttaa
     5941 tgataaaatt tttaacgcca ctaaagaagg tggttattgt tgtatagtta tagctaatga
     6001 agtagtaaat ggcactctgt tggcccttcc tcatatggtt ttgtcccagc tagttgagcc
     6061 atttggtaat tggaatctcc atgaagaaat tatttggcat aaagttactg gtggtacaaa
     6121 ccgttatgga tcgtttgtaa tcaatcctta tccaaaatat tatagggcaa acataatgca
     6181 tgaatttatt ttagtccttc gtaagggtaa cgtgaacagt ggaagaacag aaaggaagga
     6241 aactctacct gcaactcatg aagaatggac taaggagata gctaattctg tatggcatat
     6301 agcacctatc cccccaggat atatagacca cccatgtcct tttccagaag aaattccgta
     6361 taggctcatg aaattatatt cttatgtagg ggatctaatt ttggatccat ttaatggaag
     6421 cggtcagacc acaaaagtag cctttcattt acaacgtcac tttgttggag tagatattat
     6481 aaatgactat gtaaagttag ctcgctcacg cttgagtgaa cctatacata ttagatccga
     6541 agcattgata gccaattgga aaaaggttcg ttcacaccat aacatatagt tttatttata
     6601 ttatttgtta atcccaaaaa acaaaatttc ttagtttcag attctattaa tccaatatat
     6661 atttgaacga aattattggt tttactgtgt ttctagcagt ggtctttttt aaagtgaaaa
     6721 attttaaaaa acttgtaaat atctaaataa gcaatatgat tgaaaatcat cattgactaa
     6781 aatatgtgtt tctctagcac caacttcact tcaacaatta aaacatcttc ttgaaaaagc
     6841 attatacttg gctgattttt ttgaaatccg ttttgattat ttagatacat cagaaattgc
     6901 gaatgctatg aaaattgttt atccttttaa atccaaatcg gtatttacca ttcgttcaaa
     6961 tgcagaacaa ggaaaatttt ctggcaa
//
LOCUS       DATIAS010000410         2005 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1300012, whole genome shotgun sequence.
ACCESSION   DATIAS010000410 DATIAS010000000
VERSION     DATIAS010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1300012"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VLA74_08310"
     CDS             complement(<1..229)
                     /locus_tag="VLA74_08310"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSF50745.1"
                     /translation="MLTGPAIGLAGSSVILAFILNAIITLFTAMGYAELGSAMPEAGG
                     GYLWVREGLRRPNAFISGWMAWLAHIIAGSLY"
     gene            1341..1904
                     /locus_tag="VLA74_08315"
     CDS             1341..1904
                     /locus_tag="VLA74_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50746.1"
                     /translation="MLVISITGSLITFSTSAELLSIINHAFAEDENSKNMKNVSQQKQ
                     ESSTDKNNKINVEFAKKEKSESDLDDNNCKTSKILKGASNKKDLKILSECEKAVGKVK
                     HVQEMPDGDYKFFLKLEKEYKSLLNKDNKKKTGGNLVVEIVPKDQDSKYVELPDKGDN
                     VEVWGAWVIDKPKGWNEIHPAWKVTVK"
BASE COUNT          780 a          292 c          295 g          638 t
ORIGIN      
        1 cgtataaact acctgcaata atatgtgcaa gccatgccat ccagccacta ataaaagcgt
       61 taggacggcg caatccttct ctaacccata aatatccacc accagcttct ggcattgcag
      121 agcctaattc agcatagccc attgctgtaa aaagcgtaat aattgcatta aggatgaaag
      181 caagaatgac agaacttcct gcaagcccaa ttgcaggacc agtaagcaca aatatagaac
      241 caccaatcat ccctgctatt ccaatcatca ccacatctag caaacccaat gaacgaacga
      301 gtttgtgttc gtgcggatgg atgggacttt gtggctctct gatattagcc attcagttgg
      361 actttaagaa tgaagcgatt taatatactt atatatcaaa agttatttaa tttataatta
      421 ggttttttta tattttataa taatttcaat tttctccata tgacaaaaaa attttataaa
      481 tattatttag catgacttaa atttaactaa tattaaaatc aataaaatat agaaattaaa
      541 taaagtttgc ctatgcaaaa atcgttgtgt aacagaaatc atcaatgtta aatatattaa
      601 gagataatga aatctataat taatcaacat ttaccatatt aataggataa tttcaataaa
      661 caaatcttta tagttagatt agtaagagtc attataataa tcataatgat gattataata
      721 caagcaatca aaaaggttag agaccctcat acccttgtct tttctcctac aaacctatta
      781 aatatataaa ttatggataa atttagatga gccctagaaa actacgggcc cgtcgggagt
      841 aataccgata gcggtgcgaa aataagagtc taatgttata gcacaaagag atattattta
      901 agacttgtga atacaaatga taatacgacc tataaagttg aagcatttac taattggcaa
      961 aaaataatta aataccgatt tgataattaa atactaatgt tgaatcgttt cttctcccga
     1021 ttattttatt tgttatttat aatatttttt ataatattct ttttattaat attttctgaa
     1081 tttcttaaat aaatcttaca gtgaatctct tttcatagct ttttctccat tcttttatca
     1141 gatttatcca caagtttttt tactatttgt tattgtaaat gaatttgttt tagaaaacca
     1201 aaaggtttcc ttagaaaaag atcattattt tcttatcata atattaacta taactttgtt
     1261 atgaaggata aaaggataaa cgttaaatta gaatttaact ttcaacactt gtgaagaaat
     1321 acacaaatat attatacttt atgttagtaa tttcaattac aggatcgcta ataaccttta
     1381 gcacatcagc agagttatta tcaataataa atcatgcttt tgcggaagat gaaaactcta
     1441 agaatatgaa gaatgtatca caacagaaac aagaatcatc tacagataaa aataacaaaa
     1501 tcaatgtgga atttgcaaag aaagaaaaat ctgagtcaga cctggatgat aataattgta
     1561 aaaccagtaa gatcctaaaa ggtgcgtcaa ataaaaagga tttaaaaata ctttcagaat
     1621 gtgaaaaggc ggtaggaaag gtaaaacatg ttcaagaaat gcctgacgga gattataaat
     1681 tctttctgaa attagaaaaa gaatacaaat cccttttgaa taaagataat aagaaaaaga
     1741 caggaggaaa tcttgttgta gagattgttc ctaaagatca agattctaag tacgttgaat
     1801 tacctgataa gggagacaat gtagaggtat ggggagcttg ggttatagat aaaccaaaag
     1861 gatggaatga aattcatcca gcatggaaag tcacggtaaa ataaacagaa tgaatgtagt
     1921 caatattatt tttacttgac tcacttctca aaacttccat tagaggttca agtcttactt
     1981 caaaattatg tcatgaaata attat
//
LOCUS       DATIAS010000411         3013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1982740, whole genome shotgun sequence.
ACCESSION   DATIAS010000411 DATIAS010000000
VERSION     DATIAS010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1982740"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..562
                     /locus_tag="VLA74_08320"
     CDS             14..562
                     /locus_tag="VLA74_08320"
                     /inference="COORDINATES: protein motif:HMM:NF015952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-dependent dephospho-CoA kinase family
                     protein"
                     /protein_id="HSF50747.1"
                     /translation="MPVKEEHLSILKKPFGDLIRKENITKENIIRIVDSYMDDNNQTS
                     IVTVGDATTERILSYGIYPKIAIIDGVERRIRRPELKNSEIVKAYSNKNKIKFYRCTN
                     RQGTISKEAYDIIEKIVEKNEDAMVFVDGEEDLLALPVFALARNQSLVLYGQPLEGIV
                     VVKIDNKLKKKAQDLLDSIGFS"
     gene            complement(1304..1567)
                     /locus_tag="VLA74_08325"
     CDS             complement(1304..1567)
                     /locus_tag="VLA74_08325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50748.1"
                     /translation="MESRIEYSGKVYLYSSGMPKELIEVAKSKLVDDCGVVLQDIELI
                     EVPEGVPQGSIMITIWPHYLSVAKVKIVREGSIYAPQLFNIDI"
     gene            complement(1681..1851)
                     /locus_tag="VLA74_08330"
     CDS             complement(1681..1851)
                     /locus_tag="VLA74_08330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50749.1"
                     /translation="MGSRKRRTIKPQRKTRSVEGRCPKCTTIVRFNVSGPVGDEIYEC
                     RGCMSKYHIDEL"
     gene            1981..2265
                     /locus_tag="VLA74_08335"
     CDS             1981..2265
                     /locus_tag="VLA74_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50750.1"
                     /translation="MALPNKCSYSSKKIRCIIPPSYIISIQSNDEFLVGMSCEDHYAF
                     MKRKIELLQKTNLLPKGKINIQNTKMVSTNCIKGTKEDYEEVISQREIEF"
     gene            complement(2288..>3013)
                     /locus_tag="VLA74_08340"
     CDS             complement(2288..>3013)
                     /locus_tag="VLA74_08340"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HSF50751.1"
                     /translation="RGIYVTNTGDILSEATADLTFAFILALGRRVVEANKYVLSKKWN
                     HGWMPNLFLGTNIFNSTLGILGLGNIGSAVARRARGFNMNILYHNRHRLNRNKEKKLG
                     VNFVDKDTLLSNSDFLSIHVSLQKENYHLIDINEFKKMNKNTFVINTSRGSVINEKSL
                     ILALGKKWIAGAGLDVFESEPLKKSNALLQFNNVVILPHIGSATIQTRSKMSEVAALN
                     IHNILEGKSPLFIVNKNSKDVLI"
BASE COUNT         1119 a          489 c          446 g          959 t
ORIGIN      
        1 aataaggtaa aaaatgccag taaaagaaga acatttaagt attttaaaaa aaccatttgg
       61 agatctaata agaaaggaaa acatcactaa agagaatata ataaggatag ttgacagcta
      121 tatggatgac aacaatcaga caagcatagt tactgtaggt gatgcgacca cggaaagaat
      181 cttatcatat ggcatttatc cgaaaatagc aataattgat ggcgtagaaa gaagaataag
      241 aagaccagaa ctcaagaatt cagaaatagt aaaagcctat tcaaataaaa ataaaataaa
      301 attttataga tgtactaaca gacagggaac tatctcaaaa gaagcctatg atatcataga
      361 aaaaatagtc gagaagaatg aagatgcaat ggtgtttgta gatggggaag aagatttgct
      421 agcgctgcca gtttttgcat tggctcgaaa ccaatcatta gttctttatg gacaaccatt
      481 agaaggaata gtcgtagtaa agatagataa caaattaaag aaaaaagcgc aagacttgtt
      541 agatagtata ggatttagtt aaattgcagg gaatgatgac gtggtggctg tatgataaaa
      601 actacatgat aaaagatacc attttctgac cctttaagga aataaataca ggtcatataa
      661 aaaaaattaa acagcatgga attttttatt tattacatcc acaaccatct agctcatttt
      721 cactaaccga aatgttatac aatttcatac atttggaaca aagactgtaa ccggaaagcg
      781 ctttagaatt acagaaggaa catgtattta ctctttcatt aagcataggt taagttattt
      841 tatcttttta attaatttta tcatcctcaa acgaatcaac aaccaaaaat acatgatata
      901 ttgagggaaa taagttgcta tttagactga taatgacacg tacaatggca tttagtcatt
      961 tttatatcaa atgaacagtc atgatttgga ccacatgttt cttcgaccgg catctctaat
     1021 ggacagtcgg aatgtctctc tcttttgcaa aaaaaagata tcaccatact tattagataa
     1081 aatcagtaaa actaatttta agtattctgc tcttggtggg tgaccagtga atttattgcg
     1141 catttaaatt ttttcgtaaa ataaatattt tgtataataa gagatttcat caaaaacacc
     1201 aacactgccg aaaatcaagc tacgaaaaaa tctttaatac atatccagca atatagtcaa
     1261 attgtgagga aatttataaa tcataaattc ctaaaataat taattatata tcaatattga
     1321 acaactgcgg tgcgtaaatt gacccttccc tgactatttt taccttagca actgacaaat
     1381 aatgtggcca gatggtaatc attatggaac cttgtgggac gccttcaggg acctcaataa
     1441 gctcaatatc ttgcaagact acgccgcaat catcgactaa cttggattta gctacttcta
     1501 tcaattcttt gggcattcca ctgctgtaaa gatacacttt accagaatac tctattctgc
     1561 tttccatcta ctaataatga atgagatgga ttataaaatg taattggagc ttcaaaacaa
     1621 aagtctcact ttaagaataa atagtatttc aaataatcac tgccactgtc aaggttgaaa
     1681 ttataattca tcaatatgat atttagacat acaacctcta cattcataga tttcatcccc
     1741 aactgggcca gaaacattaa atcttacaat agttgtgcat tttggacaac gtccttcaac
     1801 gcttctagtc ttacgttgag gtttaatggt gcgccttttt ctacttccca tcctataatc
     1861 ttactagaac tttactatta ctctctttta taaacttcgt taagatcaac tgcaaataat
     1921 aagaaaaatc tctaaaattg gtatcagtta gattataaag gcggaaatat aaaattattt
     1981 gtggcattac caaataaatg ctcctactct tcaaaaaaaa ttagatgtat tatacctccg
     2041 tcatatataa tatcgattca gagtaacgat gaatttttgg ttggaatgtc atgtgaagat
     2101 cattatgcat tcatgaaaag gaagattgaa ttattacaaa aaacaaattt actcccaaag
     2161 gggaaaataa acatacaaaa tactaaaatg gtatcaacaa attgtataaa aggtaccaaa
     2221 gaggattatg aagaagtaat atctcaaaga gaaatagaat tttaaaattc caagaaataa
     2281 atcgttatca tatcaataca tctttactat ttttgttaac aataaacagg ggagatttac
     2341 cctccaagat attatgtata ttgagtgcag caacttctga cattttagat ctggtttgta
     2401 tagttgcact accaatatgt ggaagaatta caacattatt aaattgcaac aaggcattag
     2461 atttttttag tggttcagat tcgaaaacat ctaatcctgc tcctgctatc cactttttgc
     2521 ctagggcgag aataagagat ttttcattaa ttaccgatcc tcttgatgta tttattacaa
     2581 atgtattttt attcatcttt ttaaactcat ttatatctat taaatgataa ttttcttttt
     2641 gtagacttac atggattgaa agaaaatcac tattgcttaa taatgtatcc ttgtctacaa
     2701 aattaacccc aagttttttt tctttatttc tatttaacct gtgtctatta tggtacaaga
     2761 tattcatatt aaatcctctt gcccttcttg ctactgcact gcctatattt cctaatccaa
     2821 gaattcctaa tgtagaatta aagatattag ttccaagaaa caaatttggc atccaaccat
     2881 ggttccattt tttacttaaa acatatttgt tcgcctcaac aactctacgt cctaaagcaa
     2941 gaataaatgc aaaagtcaaa tctgctgtag cctcagataa gatatcacca gtattagtaa
     3001 catatattcc cct
//
LOCUS       DATIAS010000412         4200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_619751, whole genome shotgun sequence.
ACCESSION   DATIAS010000412 DATIAS010000000
VERSION     DATIAS010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4200
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_619751"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1243..2466
                     /locus_tag="VLA74_08345"
     CDS             1243..2466
                     /locus_tag="VLA74_08345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF50752.1"
                     /translation="MSDDLLNNIFDDAVKGKSLIKNRKILTIDYVPEKLQFRDEETMT
                     IAQTLSVALKGSRPSNLLLFGKPGTGKTAVIKNVIRKFTEKSFSLGIEVIVPFVNAKL
                     ASTAYKVLYEIAEEMRINQIEKRNQVYFTGLSLGEATNRILDFIQKRKLHVIFVIDEI
                     DSLVDKNGDDILYNFTRANEQFQDSGFITLIGISNSLTFKDKLDPRVRSSLSEEEIVF
                     NPYKIIQLQKILSERVKLAFSEDVVTDGAINLCAAIAGKDNGDARKAIDLLRVAAEIA
                     EREKDSKIDEKYIRLAQNKIEKDTNFEVIKNSTTHTKIVLLAITKSKNGNTGEVYEIY
                     SNYCKTIDNEPLSQRRITQIISELDQLGLINTNIVNQGRYGRSQKIKISISTDTLKEA
                     LKEDPLFLTLMHILD"
     gene            complement(2441..4066)
                     /locus_tag="VLA74_08350"
     CDS             complement(2441..4066)
                     /locus_tag="VLA74_08350"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF003118.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed DNA polymerase II small subunit"
                     /protein_id="HSF50753.1"
                     /translation="MSLQKEISNVLSFITANGYQIHPDAFTLLKDIDSNKMNIIQQVV
                     KYKKKNGSNTIIGIDDIRIFCIAVGQNNLVKNDQEIIEKFHTHHVVSSSSVYQSTNSS
                     TENNIDLKDSYKVIFDSTDYINSGEGINGYTSLFKSRFIKSLKILSTRPDSKRINKIA
                     FVKKSNNQKKQNNNLNTEYNDIKIENNNASLGGYSSVIAGLVMSKRSKRNSTELIIDD
                     QTGIINTLAVTDEAIKLVSKLTLDQMVMVEIENKGNNHIIKNVVSPDIPDHIPNKGKR
                     ESYAVLISDLHVGSKYFKETDFLRFLTWLNSSNDEIVSKIKFLCIGGDLIDGVGIFPN
                     QDKELKYNNTFKQMSHLTKLLEQIPKRIQVFIIPGNHDLGRRALPQPAVPKNDCPRLY
                     SFENFTMLGNPSFIELEGVKILMYHGQGLDDIIATIPGLSYANPAEAMKILLKARHLS
                     PIYGQRTPISPELEDMMVINEVPDVFHSGHVHVMDVQNYRGTLIINSGTWQDQTPFQQ
                     TMGIMPTSGIAILVNLATLRPFQITFNQEYASM"
BASE COUNT         1529 a          573 c          618 g         1480 t
ORIGIN      
        1 cttggcagca agtaagagaa aaaaagggtt tatcatgatt attttatgaa ttttgtatga
       61 gttttgttgt ttatatctat tagatcaggt tctatcagta atttctaata aaatattcta
      121 tgaatcaata aaagtcatac aaaaagcaat actaacctat catattttat ttcaaaatgt
      181 gatatgtgta aggatgtaat cctggacagt gtatttatcg tatttgtatt acaaaaaaca
      241 attaattgaa taaaggaata gaatagacag agacaagata aatctttcaa ctatttcttt
      301 taataagatt gattcaatcg ttacgcaaaa ttttattatt tttatcttga aaacaaattt
      361 gagaataaca aacattcaag gtttttatcg aaaaaataca gagtatatgt catactattt
      421 ttctaactat ctcggtaact attgtaatgg taatgtgata gagggtccac cttttgatat
      481 atatacggtg gtggtgtttg atggaaaata tcgctgaaaa tgagtagata taaacaaaac
      541 ctattctatc gcacataaca acaagataat gctataatga taatgaaccc ctttttctat
      601 tgttggacaa agtaaaatgc tattattaaa gaatctcatt tacaatacag ttctgaaata
      661 gtaatatggc tgtattgttc tatgagattg tattacatta tagctgtaaa gacaaattaa
      721 cgatcctctt atagcataac aacacgttga ccgaactatc tccttacgaa aattagttaa
      781 caagtttgaa atcttattta tgaagaaaaa cacgttcaaa tttacttatg ttaataatgc
      841 gttaatatta aaaaataaaa atactgttta cttgagtctc cagtggaaat aaaggggttg
      901 aaaatagact attaactaaa ttaacataaa ttcaactttc cagtggaaat aaaggggttg
      961 aaaatacaat ttcttaattt aataatgaat atttgtgatc tttgttaata aaaagtttaa
     1021 tggtgaactt ttgattgtct ccccctatat ttctattcca caatataaca aaaaataaga
     1081 ttaataaaac tatatttgtt taataaattt gttaatatta ttagatttag tggtttaaat
     1141 ttatttgtta ataacaagtt attagcaata ttcaatatgt taaaataatt tcgaaaagaa
     1201 aaacaggggt gtgagttata ttttaaatgg tgagaaaata tattgagtga cgatttactt
     1261 aataatatct ttgatgatgc agtaaaaggt aagtcattaa taaaaaatcg taaaattctg
     1321 acaatagatt atgtacctga aaaacttcag tttcgtgatg aagaaacgat gactattgca
     1381 caaacattat cagtagctct aaagggttct agaccatcaa atctattatt atttggaaaa
     1441 ccgggtacgg gaaagacagc tgttataaaa aatgttatta gaaaattcac ggaaaaatca
     1501 ttctctcttg gaattgaagt tatagtaccg tttgttaatg cgaaactagc aagtactgca
     1561 tacaaggtat tatatgaaat tgctgaagag atgcgtatta accaaatcga aaaaagaaac
     1621 caagtttatt ttactggttt gtctttaggt gaagcaacta atagaattct tgatttcatc
     1681 caaaaaagaa aattacatgt catttttgtt atcgatgaaa ttgattcact agttgataaa
     1741 aatggagatg atatccttta taattttacc agggcaaatg aacagtttca agattctgga
     1801 tttattacat taatcggaat ttcaaacagt cttacattca aagataaatt agatcctcgt
     1861 gtccgtagca gtctaagtga agaagaaatt gtattcaatc catataaaat tattcagctg
     1921 caaaaaatac tatcagagag agttaagtta gcgttttctg aggacgttgt cacagacgga
     1981 gctattaatc tctgcgcagc tattgctgga aaagataatg gtgatgctag aaaagcgata
     2041 gatttactta gggtagcagc agaaatagca gaacgagaaa aagattctaa aattgatgaa
     2101 aaatatattc ggttggctca aaataagata gagaaagata caaatttcga agtgataaaa
     2161 aattcaacta ctcatacaaa aatagtgcta ctggcaatta ctaaatccaa aaatggaaat
     2221 actggtgaag tttatgagat atattctaac tattgtaaaa caattgataa cgagcctctc
     2281 agtcaacgta gaataactca aattataagt gaacttgatc aattagggtt aatcaatact
     2341 aatatagtaa atcaaggtag atacggtcgt tcacagaaaa taaaaatttc tatttctaca
     2401 gatacattaa aagaagcgct aaaagaagat ccattatttc ttacattgat gcatattctt
     2461 gattaaaagt gatctgaaaa ggacgaagag tagcaaggtt aactaaaatt gcgatcccag
     2521 atgtaggcat tattcccata gtttgttgaa aaggagtttg atcctgccat gtaccagaat
     2581 taatgattaa tgtaccacga taattttgga catccataac atgaacatgt cctgaatgaa
     2641 atacatcagg aacctcattt attaccatca tatcttctaa ttcaggagaa attggtgttc
     2701 tttgtccgta aatcggagac aaatgtcttg cttttaataa tattttcatt gcctccgcag
     2761 gatttgcata gcttaaacca ggtattgtag caatgatatc atctaatccc tgtccatgat
     2821 acattaaaat tttaactccc tcaagttcaa taaaactagg atttcccagc atcgtaaaat
     2881 tttcaaatga atacaatctt ggacaatcgt ttttaggaac tgcgggttgt ggtaacgctc
     2941 ttcgtccaag atcatggttt ccaggaataa taaaaacttg aattctctta ggaatttgtt
     3001 ctaataattt tgttaaatga ctcatttgtt taaatgtatt attatacttt aattctttgt
     3061 cttgattcgg aaatattcct acaccatcta ttaaatcacc accaatacat aaaaatttta
     3121 ttttagatac tatttcatca ttagacgaat tcagccaagt taaaaatcgt aaaaaatctg
     3181 tttctttgaa atacttactt ccaacatgaa gatctgaaat taaaacagca tatgattctc
     3241 tttttccttt atttgggatg tgatctggga tatctggaga aacaacattt tttataatat
     3301 gattatttcc cttgttttca atttctacca ttaccatttg atcaagggtc aatttagaaa
     3361 caagttttat tgcctcatca gttactgcta atgtattaat aattccagtt tgatcgtcta
     3421 ttattaattc tgtgctattt cttttcgatc tctttgacat taccaaacct gcaataaccg
     3481 aagaatatcc acccaaagag gcattattat tttctatttt tatatcatta tattctgtgt
     3541 ttaaattatt attttgtttt ttttgattat tacttttttt tacaaatgct atcttattaa
     3601 tacgtttact atctggcctg gttgataata tttttaatga tttgataaaa cgacttttaa
     3661 aaagtgaagt gtaaccgttt attccttcac ctgagttaat atagtcagtc gaatcaaaaa
     3721 ttactttata ggaatccttt aaatcaatat tattttcagt tgatgaattt gtagattgat
     3781 atactgatga gctagaaacc acatggtgag tatgaaattt ttctataatc tcttgatcat
     3841 tttttaccaa attattctga ccaacagcaa tgcaaaaaat tctgatatca tctataccaa
     3901 taatagtatt actaccattc tttttcttgt attttactac ttgttgaata atattcattt
     3961 tatttgaatc aatatctttt aaaagtgtaa atgcatcagg atgtatttga tagccattag
     4021 cagtaataaa agataataca tttgaaattt ctttttgtaa agacaattgt aagacttacg
     4081 atgtaccaaa cttatttaat tatatttcta tttttttaac aaaaaggtat tattaccata
     4141 aaaatttctt catagatagt cattgaaaca acgtctactt tatcttgtaa ttggaatgat
//
LOCUS       DATIAS010000413         3316 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_74598, whole genome shotgun sequence.
ACCESSION   DATIAS010000413 DATIAS010000000
VERSION     DATIAS010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74598"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..956)
                     /gene="coaBC"
                     /locus_tag="VLA74_08355"
     CDS             complement(<1..956)
                     /gene="coaBC"
                     /locus_tag="VLA74_08355"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HSF50754.1"
                     /translation="MSSNLHSSKDITGTWGNLLKDKKIVLCVCGSVAAYKAIDLARLL
                     MRYGADVFPVMSRSATILLHPNYLQWATGNDVVTKLTANMEHIKLADYNKSDLIILYP
                     CTANTIGKFANGIDDTPITSILSVGLGSKIPIFIAPAMHEAMYDNHLVIDNIHKLKKL
                     GVFFLEPNIFEGKAKVIQPDQAVKLVLEFFTKIHQKRNVLSNKNVLITSGGTMEYIDP
                     IRVITNLSSGKMGYAIVKESLEFGAKVTHIVGNSSVSSSSSVGGYSFNLDNLITIRVN
                     TSDEMYAKVISEITSKKFDIVIFAAAVTDFKLAQMYDKKIPS"
     gene            complement(949..1860)
                     /gene="panB"
                     /locus_tag="VLA74_08360"
     CDS             complement(949..1860)
                     /gene="panB"
                     /locus_tag="VLA74_08360"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HSF50755.1"
                     /translation="MNNNNHNKPKLKKMTISDIVSMKNKEKISVITSYDYWSAKICDN
                     AGIDILLVGDSGGMVMLGYDSTIPVNMKEMLMFTKAVATGTKRSLIVSDMPFGSYQID
                     VKHAVKNAIRFIKSGSDAVKLEGGIEMIDKIKAILNMGIPVMGHIGLKPQTTKLWEGY
                     KVQGNTALSGTKLLREAKELEKVGVFAIVLEMVTLEVAELISKNLKIPTIGIGSGPHC
                     DGQVLVLHDMLSLYDKIKPRFVKSYINLSETILNALYNYISDVKNSKFPEDQHSYKIQ
                     NNENIQLSKTRKSIRKKFSSSSLRKNE"
     gene            complement(1853..2617)
                     /locus_tag="VLA74_08365"
     CDS             complement(1853..2617)
                     /locus_tag="VLA74_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenate/pantothenate synthetase"
                     /protein_id="HSF50756.1"
                     /translation="MIYNHNIPPNHPRAKSLEIRELLVSGFKSGLVVGEGLIAHGRGE
                     AFDYLLGEKTSSYAFDAIKAAASLLLLAERPVISVNGNTAALCPKDIVELAHETGSLL
                     EVNLFYRTKNREILIAEILKKNGANIVLGVGQKKFVKIPELTSNRRHIDPEGIFLADV
                     VFVPLEDGDRTQALINMHKKVITIDLNPLSRSSQTATISIIDNIVRSIPELVKTSKQL
                     KQMNKSSLLNILNTFNNQYNLDNSLRIIRGNVRDNE"
     gene            complement(2607..>3316)
                     /locus_tag="VLA74_08370"
     CDS             complement(2607..>3316)
                     /locus_tag="VLA74_08370"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50757.1"
                     /translation="LEVSKWVIQYYLDKFDLPSYFINIKHSIAIPIGYGLGTSGAAAL
                     SLSYALNKALDIGLLREQAAQIAHIAEIKCKTGLGSVIAEFYGGLEIRTSFGAPGIGK
                     VTKIELNNYKAIILCINPISTKQILDSYSNTANTLGSKMVEQLLLSKDVNSFLSMAHK
                     FADFLGLTKGLCEKPIQKLNSLGVDCSMALFGQTVFTLVQDREVSKVKSILKEFPGTL
                     IVSDIDNKGAIIKNYDL"
BASE COUNT         1091 a          568 c          431 g         1226 t
ORIGIN      
        1 tggctaggaa tttttttatc atacatttgt gcaagtttaa aatctgttac agcagctgca
       61 aaaataacta tatcaaattt ctttgaagta atttcagaaa taacttttgc atacatttca
      121 tcagatgtat taactctaat agttatcaaa ttatctagat taaaagaata accacctaca
      181 gaagaagaag aagaaactga agaatttcct acaatatggg taacctttgc accaaattca
      241 agagattctt taactattgc ataacccatt tttcctgagc taagattagt tatcactctg
      301 ataggatcaa tatattccat tgtacctcct gatgtaatta aaacgttctt attggaaaga
      361 acatttcttt tttggtgtat tttagtaaaa aattctaaaa ctaattttac cgcttgatct
      421 ggttgaatga cttttgcttt accttcaaaa atattaggtt ctaaaaaaaa tacgccaagt
      481 ttttttaatt tatgtatatt atcaattact aaatgattgt catacattgc ttcatgcata
      541 gcaggtgcaa taaaaatagg aatttttgat cctaatccta cagacaaaat agaagttatt
      601 ggagtgtcat ctattccatt tgcaaatttt ccaattgtat tagctgtaca gggatacaaa
      661 attattaaat cggatttgtt ataatctgct aatttaatat gttccatatt tgccgttaat
      721 ttagtgacaa catcatttcc agtagcccat tgcaaataat taggatgtaa taatatagta
      781 gcagaacgtg acattacagg aaatacatct gcaccatatc tcattaaaag acgagctaaa
      841 tcaattgctt tataagcagc tacacttcca catacacaaa gaactatctt tttgtctttt
      901 aataaatttc cccatgttcc tgttatatcc tttgaagaat gtaaattgct actcattttt
      961 tctcaaagaa gaagaagaaa atttttttct tatacttttt cttgttttgg ataattgtat
     1021 attttcgtta ttttgtattt tgtatgaatg ttgatcttca ggaaatttac tattttttac
     1081 atcactaata taattatata atgcattcaa aatagtttct gaaagattga tgtaactttt
     1141 tacaaatcga ggtttgatct tatcatatag acttaacata tcatgtaaaa ctagaacttg
     1201 tccatcacaa tgagggcctg atccaatacc aattgttggt atttttaaat ttttagagat
     1261 taattctgca acttctaaag taaccatttc taacacaatt gcaaaaactc ctactttctc
     1321 caattctttt gcttctctta agagtttggt accagaaaga gcagtattgc cttgtacttt
     1381 atatccttcc caaagttttg tagtctgcgg ttttaatcct atatgaccca ttaccggaat
     1441 tcccatatta agaattgcct tgattttatc aatcatttca attccacctt caagtttaac
     1501 tgcatcactt cctgatttta taaatcgaat agcattctta actgcatgct taacatcaat
     1561 ttgatatgaa ccaaaaggca tatcggatac tattagagat ctcttagttc ctgttgctac
     1621 tgcttttgta aacatgagca tctctttcat atttacaggt atagtagaat cataacctag
     1681 cataaccatc cctccactgt caccaactag tagaatatca atacctgcat tatcacaaat
     1741 tttcgcactc caatagtcat aagatgtaat gactgaaatt ttttctttat ttttcatgga
     1801 tacaatatca ctaatagtca tcttctttag cttaggttta ttatgattat tattattcat
     1861 tatcccttac atttccacgt attattctta aagaattatc aagattatat tgattgttaa
     1921 aagtattcaa gatatttaat aaagaacttt tattcatttg ttttaattgt tttgaagttt
     1981 taacaagttc tggaatagat cttacaatat tatctattat acttattgta gcagtctgtg
     2041 aagaccttga aagaggatta agatcaattg taattacctt tttatgcata ttaattaagg
     2101 cttgtgtacg atcaccatct tctaatggta caaaaactac atcagctaga aaaattcctt
     2161 ctgggtcaat atgccttcta ttactagtta actcaggtat ttttacaaat tttttttgac
     2221 ctactccaag aacaatattt gctccatttt tttttaggat ttctgcaatt aaaatttctc
     2281 tattttttgt tctatagaaa agattaactt ctagtaagga tcctgtttca tgtgctaact
     2341 caacaatatc tttaggacat aatgctgctg tatttccgtt tacagatatt acaggtctct
     2401 cagcaagtaa aagtagactt gcagctgcct taattgcatc aaaagcataa gaagaggttt
     2461 tttcacctaa aagataatca aatgcttctc ctctaccgtg ggctattaat ccttcaccaa
     2521 cgaccaaacc agacttgaaa ccactaacaa gtagttctct tatttcaaga gatttcgctc
     2581 taggatgatt gggtggtata ttatggttat aaatcataat tttttattat agctccttta
     2641 ttatcaatat ctgaaactat caaagtacct ggaaactcct tcaaaattga tttaacttta
     2701 gagacttctc tatcctgaac caaggtaaaa actgtttgtc caaacaaagc catgctacaa
     2761 tcaactccaa gactgtttaa cttttgtatt ggtttttcac ataatccttt tgtcaaccct
     2821 aaaaaatctg caaacttgtg agccatactt aaaaaagaat taacatcttt tgataataat
     2881 aattgttcca ccatcttact gccaagagta ttagcagtat ttgaataact gtcaagaatt
     2941 tgttttgtag aaattggatt aatacaaaga ataatagctt tatagttatt taattctatt
     3001 ttagtcactt tacctattcc tggcgcacca aaactagttc gaatctctaa tccaccatag
     3061 aattcagcta ttacagatcc taaacctgtt ttgcatttta tttcggcaat atgtgctatc
     3121 tgagctgcct gttctcttaa taatcctatg tcaagagctt tattcaaagc atatgaaagg
     3181 ctcaaagcag ctgcaccact tgttcctaat ccataaccta taggaatagc tatagaatgt
     3241 tttatattga taaaataaga tggtaaatca aatttgtcaa gataatattg gataacccat
     3301 tttgaaactt ctagtt
//
LOCUS       DATIAS010000414         2810 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1572311, whole genome shotgun sequence.
ACCESSION   DATIAS010000414 DATIAS010000000
VERSION     DATIAS010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572311"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VLA74_08375"
     CDS             <1..655
                     /locus_tag="VLA74_08375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50758.1"
                     /translation="GLIYAAIRKDFFILLFSIPFLLFLYWIDFVSSFHFIPLMPAFSI
                     AGAKLIVELSDRIPNLKIRKITPYAVTSAITIFALATIIILLSIDANSSIIKAQAVVI
                     DYMLKSNGTVTLVSSPIYVWIPEQIFHIDMDERSYFSTKPLKTGDYVIISDNGYKKIM
                     KETSKRGTFHKTLFAGTHLIETVKPDNSIKKYNIKIYPYTNLKPSPLSKEIDIRGNY"
     gene            818..2149
                     /locus_tag="VLA74_08380"
     CDS             818..2149
                     /locus_tag="VLA74_08380"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF50759.1"
                     /translation="MILLNNNIEKISFTIFIFVGMLLLSITLDDIDAQSKKKSKKDIN
                     PILTDPDLKAELIIDKLKFPIGMEIIGNDDFLLIEKNTGVVKRIANGQVTQLLDLNVA
                     SESERGLLGIAYLNLSNSGKFSEDDDSLIPSYVFLFATETESQDDGNILGNKLYRYDF
                     IDGKLVNPVLLLDLPFTPGPSHNGGVLRIGPDGNLYLVMGDLNRNKVPTGDTIAQNLE
                     GTSLPDGRGGVLRITPDGDTVNDGFSLGNSGLLDKYYGYGIRNSFGIGFDSITGYLWD
                     TENGSHYGDEINIIKPGFNSGWRQVLATPSLYKSMTGEDFDRNMLITFNNKGKYYDPA
                     LTWNQTMAPTTIAFIHTDTLGDEYKDDMLVGSVKNGTLLHFDLNSTRTGLQLTGPLAD
                     RIVNTPSEINEAVLGTGFGIITDIKIDPTDGDLFVIASNTKNGKIFKISKS"
     gene            complement(2466..>2810)
                     /locus_tag="VLA74_08385"
     CDS             complement(2466..>2810)
                     /locus_tag="VLA74_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50760.1"
                     /translation="INNDFSKNKDYKKWNAAFAEPKMQTKFIVEGFDSGSQFLLKTNE
                     TVSELVSVDKRNNIQFSFVNDGLSYIFKIEATKTPMLITILILSILIGLSAGIFFLLR
                     RKRMIRDNNIKR"
BASE COUNT          976 a          417 c          444 g          973 t
ORIGIN      
        1 tggtcttatc tatgcggcta ttaggaaaga ttttttcatc ttgttattta gtatcccctt
       61 tttgctattt ctatattgga ttgattttgt gtcttctttt cattttattc ctttgatgcc
      121 cgcattttca atagcaggtg caaaactaat agtcgaatta tcagatcgta ttccaaatct
      181 aaaaataaga aaaataacgc catatgcggt aacatctgcc attactatat ttgcattggc
      241 tactatcata attcttctct ctatcgatgc taattcttca atcataaaag cacaggctgt
      301 ggtgatagat tatatgctaa aaagtaacgg tactgtaact ttagtaagca gtccaatata
      361 tgtctggatt cctgagcaaa tattccatat agatatggat gagagaagtt atttctccac
      421 caaaccactg aaaactggtg attatgtaat aatttctgat aatggatata aaaagatcat
      481 gaaggaaaca agtaaaagag gtacatttca taaaacatta tttgcaggga cgcatttaat
      541 agaaaccgtc aaaccagata attctataaa aaaatataac ataaaaatat atccctatac
      601 gaatctaaaa ccctctcctc tatcaaaaga gatagatatt agaggaaact actgaactat
      661 cgtacaataa ataaaaaata tttctttgat tttaataata caacctatta taaacttttg
      721 ggcaatttta ttctgctgat tcaaacaaag atcttcacca ccatcttcat taatatcttc
      781 gaatagattc aaatatactt gacaatattt tgaccatgtg attctattaa ataataatat
      841 tgaaaaaatt tcttttacta ttttcatatt tgtcggtatg cttcttttat caataactct
      901 tgatgatatt gatgctcaat ccaagaagaa atcaaaaaaa gatatcaatc caattttaac
      961 tgatccggat ttaaaagctg aattgattat agataaactg aaatttccaa taggtatgga
     1021 aattatcggt aacgatgact ttttattaat agaaaagaat actggtgtag taaaaagaat
     1081 agctaatgga caagtaactc aactcttgga tctgaatgta gcatcggaga gtgaaagagg
     1141 tcttttagga attgcttatt tgaatttatc taattcggga aaattttcag aggatgatga
     1201 ttctttaatt ccttcctatg tttttctttt tgctactgaa acagaaagtc aggacgatgg
     1261 taatatttta ggaaataaac tttatagata tgattttatt gatggaaagc tagtgaatcc
     1321 ggtcctgctt ttggatttac cattcactcc aggaccatct cataatggtg gggtattgag
     1381 aatcggacct gacggaaatt tgtatcttgt tatgggtgat cttaatagaa acaaagttcc
     1441 cacaggagat actattgcac aaaatcttga aggaacatct cttccagatg gtagaggagg
     1501 tgtattaaga attacacctg atggggatac tgtcaacgac ggcttcagtt tgggtaattc
     1561 aggtctacta gacaaatatt atggatatgg tattcgaaac agttttggta ttggatttga
     1621 tagtattaca ggatatttat gggatacaga aaatggttct cattatggtg atgaaattaa
     1681 tattattaaa cctggcttta atagcggttg gagacaagta ttagcaactc ctagtttata
     1741 caagagtatg actggggaag attttgatag aaacatgcta attacattta ataataaagg
     1801 caaatattac gatcccgctt taacatggaa tcaaaccatg gctcccacca caattgcctt
     1861 tattcataca gacacattag gcgatgaata taaagacgac atgttagtag gaagtgtaaa
     1921 aaacggcaca ttgcttcatt ttgatcttaa ttctactaga accggattac aattgactgg
     1981 accattggct gatagaatag ttaatactcc ctcagaaatt aatgaggcgg tattgggtac
     2041 aggatttggt attatcacag acataaaaat agatccaaca gatggagatt tatttgtgat
     2101 cgcctccaat acaaaaaatg gaaaaatatt caaaatttct aaatcatgag atatttcata
     2161 aaatattaag ttaaatgaaa agataattaa gtcacaatat taaatctatc atttttttgc
     2221 ctctgatagt tataatatat tgcggcagtt gtattatttc tctcgtattt aatttatata
     2281 tgtatcatca atgacacatt attttatata cattctttat cttgatagtc ttgtattttg
     2341 tttttattat taacagctat agttacttct agatgttgaa attacatata ctttatccaa
     2401 aattcaatac gtaatttaat agattgataa gattaatcct ttactaaaaa ataggaggga
     2461 ccttgttatc tttttatatt gttatcccta atcatccttt ttcttctcaa taaaaagaaa
     2521 attccagctg aaaggccaat caggattgat aaaattaata tcgtgattaa cataggagtt
     2581 ttggtcgctt caattttgaa aatatatgat aatccgtcat taacaaaaga aaattgtata
     2641 ttatttcttt tgtcaactga aaccagctca gaaactgttt catttgtttt taaaagaaat
     2701 tgactgccag aatcgaaccc ctctacaata aattttgtct gcatttttgg ctccgcaaag
     2761 gcggcattcc attttttata atccttattt ttggaaaaat cattattaat
//
LOCUS       DATIAS010000415         3483 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1572363, whole genome shotgun sequence.
ACCESSION   DATIAS010000415 DATIAS010000000
VERSION     DATIAS010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3483
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572363"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..337
                     /locus_tag="VLA74_08390"
     CDS             122..337
                     /locus_tag="VLA74_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50761.1"
                     /translation="MLKNDDDDRYILDLWKAFCRSRKALSIEYNATDAVNNKWTNRFF
                     NISSIEQIKKYVKDNINNEGHVLDDPF"
     gene            complement(443..712)
                     /locus_tag="VLA74_08395"
     CDS             complement(443..712)
                     /locus_tag="VLA74_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50762.1"
                     /translation="MTKNPPSYSIRHENTGTENSVRHIDTIKEMEALKLEYQIRCSHY
                     ELELIGDEKKITCIICGKNWLFLEERGFMKIKSVYTAEKNESYTS"
     gene            complement(988..1431)
                     /locus_tag="VLA74_08400"
     CDS             complement(988..1431)
                     /locus_tag="VLA74_08400"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HSF50763.1"
                     /translation="MKVILLSFFASLAVLVIFVPPLFEKSLIAQNTTKAIGASIPYYL
                     FPTEIEEIEEEILKLPHDAYSVQTIVANKGDNLTIKFYNTEGEERHTFTLDAPYNINE
                     DLKGGQNSTINFVANKEGIFTYYCKYHLPTMTGKLLVLPQQQQSQ"
     gene            complement(1475..1930)
                     /locus_tag="VLA74_08405"
     CDS             complement(1475..1930)
                     /locus_tag="VLA74_08405"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HSF50764.1"
                     /translation="MDKKQYLIIFSIIIVSLFSFALLDSNLYSNREEQDDIELEGIVN
                     YVVDGDTLDINDIRIRLALVDTPERGQDGYKEAREFVKNLCLNKKGEVDIDDGQRRGD
                     RYGREIGVVYCDGINVNKELVENNLTKIYTEYCDISEFSKEEWAIKNCI"
     gene            complement(1979..2224)
                     /locus_tag="VLA74_08410"
     CDS             complement(1979..2224)
                     /locus_tag="VLA74_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HSF50765.1"
                     /translation="MKVKITSILMVMFVSSLTFFSFTITKTEAQFDDCDSSYPDVCIA
                     SPPPDLDCGDISDKKFTVLSPDPHGFDRDGDGIGCES"
     gene            complement(2352..2558)
                     /locus_tag="VLA74_08415"
     CDS             complement(2352..2558)
                     /locus_tag="VLA74_08415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50766.1"
                     /translation="MTNYFNFYEKYTNGPTKCATLNPTARHIPDNEVGQLKPLVNRLN
                     VQTNIAKELVADSMIKEFKQRYFD"
     gene            2798..3235
                     /locus_tag="VLA74_08420"
     CDS             2798..3235
                     /locus_tag="VLA74_08420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50767.1"
                     /translation="MKAKLNKQKSNSISSMKLTIAPILVIILLISSFSTILVNVSAES
                     EPNVMVSPECGELEGFSMILKVNGFEPNGNVQWQVVHHESKTIASYGYFATNSTGGFN
                     EDAFIEGPLIKGSYEIQLFNDLDQDNLPDNNKIQKILTVSVPC"
BASE COUNT         1201 a          518 c          488 g         1276 t
ORIGIN      
        1 cactaatact ctatgatact attagcagtc atatataaat gatagaatgg taataggatg
       61 attatatata taaaccgata tctttattca ggtttagtta tcaaattaat atgatcagtt
      121 aatgttaaaa aatgatgatg acgatcgtta tatacttgac ttatggaaag cattttgtag
      181 gtctagaaaa gctttgtcca tagagtacaa tgctactgat gctgtgaata acaaatggac
      241 taacagattc tttaatatat cttccataga acaaattaaa aaatatgtga aagataatat
      301 taataatgaa ggacacgttt tagatgatcc gttttaatca atttttgata ttatagtagt
      361 gtataccaat tagcataact atacttagca ttattatcgt tattgaaacc ataatccctg
      421 taattgcgtc attgaacttt tgctaactgg tataagactc atttttttct gctgtataca
      481 cagacttgat tttcatgaaa cctctttctt ccaaaaataa ccaatttttt ccacaaataa
      541 tacaagttat ttttttctcg tcaccgatta attcaagctc ataatgacta caacgtattt
      601 gatattctaa ttttagtgct tccatctctt ttatagtatc gatatgtctg acagagtttt
      661 cagtacctgt attttcatgt ctgatgctgt aagaaggggg atttttggtc ataacaatag
      721 gatagatttt agttgaataa gatttattcg actattaaag gaattagaaa tctattatca
      781 gtatttcagt tcagtcagaa ttcttaatta ttagcatgat ttatttttca taattgcaaa
      841 agcttgttat gcttgtaaaa aggaattggg aacatttgcg acaaaatggt cgcataagga
      901 atttctttac gagcgaattc caatacctaa tggaatgcta gaagatgatg tcgtatgtaa
      961 atcatgcttt gaggtaatta attattgtta ttgagattgt tgttgttgtg gcaatacaag
     1021 caattttcct gtcatagtcg gtagatgata tttacagtag taggtgaata ttccttcttt
     1081 attagcaaca aaattaattg ttgaattttg tcctcctttc agatcttcat tgatattata
     1141 tggagcatct aaagtgaacg tatgtctttc ctcgccttca gtgttataga atttaatagt
     1201 taggttgtca cctttatttg caacaattgt ttgtactgaa taagcatcat gagggagttt
     1261 taaaatttct tcttcaattt cctctatctc tgttggaaag agataataag gtattgacgc
     1321 tcctatggct tttgttgtat tctgtgcaat taatgatttc tcaaaaagag gaggcacaaa
     1381 aatgacaagt actgctaaac ttgcaaaaaa agaaagcaaa attactttca taatttatca
     1441 atatatttat ttaagattta taaaaacatt tatcctaaat acaattcttt atagcccatt
     1501 cttccttgga aaattcagaa atgtcacaat attctgtata gatttttgtt aaattgtttt
     1561 ctactaactc tttattgaca tttataccat cacaatagac aacacctatt tctcttccat
     1621 atctgtcacc tctacgctga ccatcatcaa tatccacttc gcctttttta tttagacata
     1681 aattcttaac aaattccctt gcttctttat atccatcttg tccacgttcg ggtgtatcaa
     1741 ctaatgctaa ccttattctg atatcattga tgtctagagt atcaccatct acaacataat
     1801 ttactatacc ttctaattct atatcgtctt gttcttctcg gttactgtaa agatttgaat
     1861 caagaagagc aaaagaaaaa agacttacta taatgattga aaatattatc aagtattgtt
     1921 tcttatccaa ctgaattaaa aatttgatat attattgtat tttgaaacca taagatggtt
     1981 atgattcaca tcctataccg tctccatcgc gatcaaatcc atgcggatct ggtgacaaaa
     2041 ctgtaaattt tttatctgaa atatcaccac aatcaagatc cggtggtgga gatgctatgc
     2101 atacatctgg atatgaagaa tcgcagtcat caaattgtgc ttctgtttta gtaatagtga
     2161 aagaaaaaaa agttaaactt gaaacaaaca tgaccatcaa aattgacgtg atttttactt
     2221 tcaaagttaa gtgaaattat aaaagagtaa tattaaaaat gttctataat aataaataaa
     2281 tttcaaaatt gccatttaat taaattgata gagcatttcg cttaacccaa acattttcat
     2341 gaggatcaac tttaatcaaa atatctttgt ttgaactctt taatcataga atcagctact
     2401 aactcttttg caatattggt ttgtacattt aatctattaa ctaatggttt taattgtcct
     2461 acttcattat caggaatatg tctagctgtt gggtttagtg ttgcacactt tgttggtcca
     2521 tttgtgtatt tttcatagaa attaaaataa tttgtcattt cacttcaccc ttttcattat
     2581 aattttttgt tatctagaga acaatttaaa ataatcatta tatttgaatt atttaattta
     2641 agtcaagtgt cttgatggat gtgatatcct tttaattaca gatctaaatt tctgcatttc
     2701 cttatagaaa attagaagat ggcatgatga tattcatgat gacacttgac ttaattgtta
     2761 atcagtatct caataatttt tatatcttac aagaattttg aaagcaaaat taaataaaca
     2821 aaaatctaat agtatatcat caatgaaatt aacaatagct cctattcttg taataatatt
     2881 attgatatca tctttctcaa cgatattagt aaatgttagt gccgaatcag aacctaatgt
     2941 aatggtatcg ccagaatgcg gcgaacttga aggcttttca atgatactca aagtcaatgg
     3001 atttgaacca aatgggaatg ttcagtggca agtagtccac catgagagca aaactattgc
     3061 ctcatacgga tattttgcca ccaacagtac gggtggattc aatgaagacg cattcattga
     3121 aggtccatta atcaaaggat cgtacgaaat tcaattgttt aatgatttag atcaagataa
     3181 tctacctgat aataataaga ttcaaaaaat attaacagta tcagtaccct gttagataca
     3241 taatactatc catagagata tattaaaatg gataattgaa atttttatag accctagacc
     3301 aacaactaag aatattataa atatcatatt agtttttacc gtgaaacata ttcaatctta
     3361 cagattttaa tattgtcact aaatgcataa tagatctaat atacctatac acaattaaaa
     3421 aataatataa ttgtcgatat cattttttta caaattgaaa tgcaaaagta ttattttctt
     3481 tta
//
LOCUS       DATIAS010000416         2461 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1846884, whole genome shotgun sequence.
ACCESSION   DATIAS010000416 DATIAS010000000
VERSION     DATIAS010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1846884"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VLA74_08425"
     CDS             <1..204
                     /locus_tag="VLA74_08425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50768.1"
                     /translation="KSLIERVIQYFKDRTESFDDYYPCCNNKQNCDLLHVYNWIKLFI
                     YLYNRTIRNKIPFLMNGGEIVLS"
     gene            676..1032
                     /locus_tag="VLA74_08430"
     CDS             676..1032
                     /locus_tag="VLA74_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50769.1"
                     /translation="MSRLEEFCSKYTREANEKVRCGSCQNILLYCGYYEIIKVEKYDE
                     EGILCETCKKNGREIEIVTIIISSSSLSSYSPSSLSSEDDNIIYQIPLSQLGIELLLE
                     QAEEVEEEHPELKTTK"
     gene            1112..1276
                     /locus_tag="VLA74_08435"
     CDS             1112..1276
                     /locus_tag="VLA74_08435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50770.1"
                     /translation="MANIVHRFLNILEIKQYMLLLAAKVISIFMAFYKTKVFVILISP
                     KKEGYDSNNN"
     gene            1482..2171
                     /locus_tag="VLA74_08440"
     CDS             1482..2171
                     /locus_tag="VLA74_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50771.1"
                     /translation="MKYLNFIIIVTVIAILAGTLVANNNNAFAQNLTINASSGITQSA
                     NNETYSSVEKDKSSLNNYQKSQTFTHGIVVKIDNIGYYFDGPADGANGTKDAPGHYWW
                     QDAPTHLYGLHYNIGPFGEEQWWSSDVKDNELLYVVDVIIAPWTNKTAYEFAKQGYVH
                     YHELVRTDNGEKHPELVAWFKHVAVPAGFILDKGPMPEDKHIVAAGIDYRFLNNYFIP
                     YNPKVAHGHSE"
BASE COUNT          949 a          346 c          343 g          823 t
ORIGIN      
        1 aaaagtctta tagaaagagt aatacaatat ttcaaagaca ggactgagag ttttgatgac
       61 tactatcctt gttgtaataa taaacagaat tgtgatctat tacatgtata caattggata
      121 aaattgttca tctatttgta taatagaaca attagaaata aaataccatt tcttatgaat
      181 ggaggtgaaa tagtcttaag ttaacagcac ttaattaact atttatgtta atatattttg
      241 atataaattt tatttaccat aatttacctt atagatagaa tcaaaatata agtatattat
      301 catagattca aataaggtta taagaataat atcatatcat ttaagaaaat gtgtcaatgt
      361 agtaaagata atatagttct aacaaacaat tacttaaaaa tataccagaa acattctcct
      421 tattctaatt taatttgatt tgttatttat aacaaaatat ttatctataa aagagtatat
      481 tattataatt aattaatttg actaataata gtagtagtaa atcaaatcag cagcaaagtg
      541 taaacgtaaa tcaattggta aattttttcc aggatacaag ttgcaacaag tccaacttta
      601 ccagaaaaat ctttctatta ctattgctaa taataaagac tattcagcat acaaatagta
      661 aaataatcag acaaaatgtc tagattagaa gaattttgtt ctaaatatac acgggaggca
      721 aacgagaaag taagatgcgg atcctgtcaa aacattcttt tgtattgtgg atactatgaa
      781 atcataaagg tagaaaaata tgacgaagaa ggtatcttgt gtgaaacctg caagaaaaat
      841 ggtagagaga ttgagatagt cacaataata atttcctcct cctctttatc ttcatattca
      901 ccttcgtctt tatcttctga agatgataat atcatttatc aaattccact ctcacaatta
      961 ggtatagaat tattattaga acaagcagaa gaagtagaag aagaacatcc agaattaaag
     1021 acaacaaaat aaagtatctt aaattcatta taacgaaaaa gatgacaagt tttacattgg
     1081 gaaataatta taacaatcat tcaatgataa tatggctaac attgttcatc gatttttaaa
     1141 tattttagaa ataaaacaat atatgctgct cttagcagca aaagtgattt ccatattcat
     1201 ggccttctac aaaactaagg tatttgtcat actgatttct cctaaaaagg aaggctatga
     1261 tagcaataat aattaacact gttaatcaaa tattatataa catgattttc aaatttctgt
     1321 atccttatat ctctgtcaaa gtcaaggtag aatggaaacc aagactatag tcttctacta
     1381 cttgtagata ttaaattggg tttctcctac gagtagaaga gaacaatgat ttcttttaca
     1441 aaatattcta atattactac tatttattat gattaatgca aatgaaatac ctaaatttca
     1501 taatcatagt aacggttatt gcaattttag caggaacctt agtcgctaat aataacaatg
     1561 catttgctca aaatttaact ataaatgcat catctggaat aactcaatct gctaataatg
     1621 aaacatatag ttcagttgaa aaggataaat cttcattaaa taattatcaa aaatcacaaa
     1681 cttttactca cggaatagta gtcaaaattg ataatatagg atattatttt gatggtccag
     1741 cagatggtgc caatggtaca aaagatgcac caggtcacta ctggtggcaa gatgcaccta
     1801 ctcatcttta cggacttcat tacaatattg gtccatttgg tgaagaacag tggtggtcgt
     1861 ctgatgtaaa agataatgaa ttactatatg tagttgatgt tataattgct ccttggacaa
     1921 ataaaactgc ttatgaattt gctaaacaag gatatgttca ctatcatgaa ctagtaagaa
     1981 cagacaatgg tgaaaaacat cctgaactgg ttgcttggtt caaacatgta gcagtacctg
     2041 caggatttat actggataaa ggacctatgc cagaagataa acacatagtc gctgcaggaa
     2101 ttgattatag attcttaaac aactacttta taccatataa cccaaaagta gcccatggtc
     2161 actctgaata aaacatataa aataagaaat ttcttccttt ttatttattt aaagtgaata
     2221 taatatcaat ttttaaatat tatgtcttta ttaccataaa ttagactctt attgtgtacc
     2281 attatcggca ttaactttga agaaataaat gtaactttac aaatactgca tcaaccatgt
     2341 gaagcacctc gttcatcaat ctttatttct actgttccat catactttgg ttttactgct
     2401 aattgtgctg gtgtatatat caaatgttct tttgtaaatg acgataattc aaaatcatta
     2461 g
//
LOCUS       DATIAS010000417         3329 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1709506, whole genome shotgun sequence.
ACCESSION   DATIAS010000417 DATIAS010000000
VERSION     DATIAS010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3329
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709506"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..518)
                     /locus_tag="VLA74_08445"
     CDS             complement(66..518)
                     /locus_tag="VLA74_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50772.1"
                     /translation="MTEFKNSKTALQYTNDPLQNFLYALKAPDSKRQYPRRFEYFLDY
                     LGLQGTLKEKCINFYEQAKREPLWTQHQIMQYIEYQKERVDKGEIAESTINNYYKSIK
                     LFCEMNDILLNWKKIAKGKPQHRDYANDRAPTIIEIKKLLDFPDGVLR"
     gene            761..916
                     /locus_tag="VLA74_08450"
     CDS             761..916
                     /locus_tag="VLA74_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50773.1"
                     /translation="MEPTKKPKVKYFNAVKSEAEKQINDFLSQHESIEVKSIAMDDVG
                     VMLLYIE"
     gene            complement(985..1614)
                     /locus_tag="VLA74_08455"
     CDS             complement(985..1614)
                     /locus_tag="VLA74_08455"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HSF50774.1"
                     /translation="MLRDQLSQQRRDLPWVQVNKEFVFDGPQGKQTLSELFDGRSQLI
                     VYHLMYDPTWNAACPSCSFWADNFNDIIVHLNQRDVTMKAISKAPYSKIDAYKKRMGW
                     DFMWVSSFDTDFNRDYYVSFTSEELEKKEGFYNFTIKNPSVSELPGVSVFYKDPSGKI
                     FHTYSAYARGIDILNNTYNYLDLVPKGRDEDDYDFPMAWVRRHDEYNKK"
     gene            1816..2199
                     /locus_tag="VLA74_08460"
     CDS             1816..2199
                     /locus_tag="VLA74_08460"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50775.1"
                     /translation="MYKKNCSPRGGLLIEKTVLSKLPRLKRNKMEIYNDILTAILQEL
                     TNNSDYDGDNDWVKPTRVQLKSNLSYDKLVRYLNELEYKKMIIQKPFSITEKGKDFLQ
                     DYSRIADFVFEMGIKYMNFSEEDVK"
     gene            2205..2828
                     /locus_tag="VLA74_08465"
     CDS             2205..2828
                     /locus_tag="VLA74_08465"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HSF50776.1"
                     /translation="MVAAYTENNKTNYRPIKFIDQIERNTHIVLLYDNKEYANWIISR
                     YFLNGLKNGESCIFFTADKPKIIEEQLSKEGIDVSLFKEKNSLRVYQIEKPGDNKHDT
                     LSTLKQIIEEATKGMKPPYRFVGRTITDIETKEGMKLGLILEKTGHEHFNEFNCSQIC
                     YYDISEIEPSMRHKWISGLLKNHHYVIYASIPDKAVAFETMLLGDEE"
     gene            complement(3196..>3329)
                     /locus_tag="VLA74_08470"
     CDS             complement(3196..>3329)
                     /locus_tag="VLA74_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011306353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HSF50777.1"
                     /translation="RTHSWMNRFRRLLIRWEKKEDNYIAILHFVCAWITYKRGGVFG"
BASE COUNT         1199 a          499 c          500 g         1131 t
ORIGIN      
        1 atgtttccat tttagataat cccatgctcc aactctaatg ccactagata acataactaa
       61 aacaattacc ttaatacgcc atctggaaag tctaataatt ttttaatttc tattatggta
      121 ggtgctctat cattggcata atccctatgt tgcggtttac cttttgctat ttttttccag
      181 tttaaaagaa tatcattcat ttcacaaaag agtttaatag atttgtaata gttgttaata
      241 gtggattctg caatttctcc tttatcaacc cgttcttttt gatattcaat gtattgcatt
      301 atttgatgtt gtgtccacag aggctcgcgt tttgcttgct cataaaaatt aatacatttt
      361 tcctttaaag ttccttgaag tccaaggtaa tctaaaaagt attcaaatct tctaggatat
      421 tgtcttttag agtctggtgc tttaagagca tatagaaaat tttgtaaagg atcatttgta
      481 tattgtaatg ctgtctttga atttttgaat tccgtcatca acgtgttatt atcgcatata
      541 tttacttata actgatataa atagaggcat atttgctacg ggcccgtcgg gagttgaata
      601 gtcatggttt cagtgttcaa tattattata atgttactct taagatttag attaaatata
      661 atattctcat tcataaatag ttgaacgaaa aataattaga atgcctaaaa taatttaagc
      721 atgttttaaa tcataagtat tattactttg tctaataatt atggaaccaa caaaaaaacc
      781 aaaagtaaaa tattttaatg cagtaaaatc agaagcagaa aaacagatca atgatttttt
      841 atctcaacac gaatccatag aagtaaaaag tatagctatg gatgatgtag gagtaatgct
      901 attgtatata gaataagttg agtaatgatg aacttaacaa tacaaatgtt gaacaatcaa
      961 atgaatataa atccctaaca taccttactt tttattatat tcatcatgac ggcgaaccca
     1021 cgccatagga aagtcataat catcctcgtc ccgtcccttt ggaactagat caagatagtt
     1081 gtatgtatta ttcaatatat ctattccacg tgcataagca gaatatgtgt gaaatatttt
     1141 acccgatgga tctttataaa agacacttac tccaggcagt tctgaaacag atggattttt
     1201 tatggtaaaa ttgtagaaac cttctttctt ttctaattct tctgatgtaa atgatacata
     1261 ataatcacgg ttaaaatctg tatcaaaaga agaaacccac ataaaatccc aacccatccg
     1321 cttcttgtac gcatctatct tactataagg cgctttagaa attgctttca tggtaacatc
     1381 tcgttggttc aaatgtacaa ttatgtcatt aaaattgtct gcccaaaaag aacatgacgg
     1441 acatgctgca ttccatgtag gatcatacat caaatgatat actattagct ggcttcgtcc
     1501 atcaaaaagt tctgacagag tctgtttccc ttgtggtcca tcaaatacaa attctttatt
     1561 gacttgaacc caaggtagat ctcgccgttg ttgactaagt tggtcacgta acatagtaaa
     1621 ttctttttct ttttttaagt agttctttac gagcttctat ccattcactt tcagaaacaa
     1681 ctttgtggtt gtttaaattg taagtcattg tttttgccac tcctctttat tttcaagata
     1741 tttacgcata gtagatactt tttctatttt tctttgagtt aatttgattt taatcatatc
     1801 caatacattt ggatattgta taaaaagaat tgctccccaa gaggaggttt attaatagaa
     1861 aagacagtac tatctaaact gcccaggcta aaaaggaaca aaatggaaat atacaatgat
     1921 attcttactg caattttgca ggaactcaca aataatagcg attatgatgg tgataatgac
     1981 tgggtaaaac ctaccagagt acaactaaaa agtaatcttt cctatgataa acttgtcaga
     2041 tatctaaatg aattagaata caaaaagatg ataatacaga agccgttttc aataactgaa
     2101 aaaggcaaag actttttgca agattatagt agaattgctg actttgtgtt tgagatggga
     2161 ataaaatata tgaatttttc agaggaggat gtgaaataat aataatggtg gccgcatata
     2221 cagaaaacaa taagacaaat tatcgtccaa taaaatttat tgaccaaatt gaaagaaata
     2281 cacatatcgt tctactatat gacaataaag aatatgcaaa ttggataata tcaagatatt
     2341 ttctaaatgg tctgaaaaat ggagaatctt gtattttctt tactgcagac aaacccaaaa
     2401 taattgaaga acagttgtct aaagaaggaa tagatgttag tttgtttaaa gaaaaaaatt
     2461 ctttgcgtgt ttatcagatt gaaaaacctg gtgataataa acatgataca ctcagtacac
     2521 ttaaacagat aatagaggaa gcaactaagg gaatgaagcc accatacaga tttgtaggaa
     2581 gaactataac agatatagaa acaaaagaag gaatgaagtt aggtctaata ctagaaaaaa
     2641 caggtcatga acattttaat gaatttaatt gttcacaaat atgctactac gatatttctg
     2701 aaatagaacc atctatgaga cataaatgga ttagtgggct tttgaaaaat catcattacg
     2761 taatttatgc atctatacct gataaggcag tagcatttga aaccatgtta cttggagatg
     2821 aagaataagg atgtttgaaa ggagatgata atctgtcaag ttaatagggc cagcatagat
     2881 agccttataa ctaaaacaga atctgtagta atttaataaa ttgcaataca taaaaattaa
     2941 tttttttgat aatcgttgtt ttttatttct aaaattatct catatacaag aattccagta
     3001 ttatatatag tatttccaaa atatgttatg acatagacta tgcgtttaat ttaaaggaat
     3061 atgactataa acaacttgac agaacattca tggcacatga aattttatct atattaacat
     3121 agaaaaatag tattataatt aattgaacaa tacaaatatt taaatttgaa attaagatta
     3181 ttctttattt agagcctatc cgaaaactcc tcctctctta tatgttatcc aagcacagac
     3241 aaaatgtaat attgcaatat agttatcttc cttcttttcc catctaatca ataatcgcct
     3301 gaatctattc atccatgagt gtgttctct
//
LOCUS       DATIAS010000418         4091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1983792, whole genome shotgun sequence.
ACCESSION   DATIAS010000418 DATIAS010000000
VERSION     DATIAS010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4091
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1983792"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..608
                     /locus_tag="VLA74_08475"
     CDS             <1..608
                     /locus_tag="VLA74_08475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50778.1"
                     /translation="NDKNNLNNITKDNSKLEVNVINSPNETPSLSKEEKVILDPKESK
                     NAKEATMTTVTTIPTEGVNVEAETEFTVPLKDKEENIETETNIQANAMTATPSRESIL
                     ESKDLENVSHSVEEESSQLKTKVKPESHDDNIKPHAITQEPDRKILPSSQEEQTNNID
                     TSNPFIMYTQYWQHIMSNWFNTYDEFLKNLMKMNGFWFGKS"
     gene            complement(1036..1929)
                     /locus_tag="VLA74_08480"
     CDS             complement(1036..1929)
                     /locus_tag="VLA74_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSF50779.1"
                     /translation="MNWNKYNESLVKRGEVLLDFDVIDNWDNELEEMNKDKEGRKFVY
                     PDSFIKLLGYMRVYFHLPYRQTEGVVRKHASNTLPSVPDYSNISRRINRLNIKIDDDD
                     KSSLQHDDYFIIAIDSTGVKVTNRGEWVRHKWNIKRGYLKIHLAVDIKKKRIISLQVT
                     SEQVHDGKVLPVLIDDITIMQNKIVDSVIADGSYDNNKNFQYLSFRGINPAIKVRKNS
                     RCRKTNHYLRNKTVKMQKDDLDKWKDSVSYGSRWIVESVFSCIKRMFGEYVTAFRFEN
                     MIKEIILKASLYNWFQSITIR"
     gene            complement(2196..3464)
                     /locus_tag="VLA74_08485"
     CDS             complement(2196..3464)
                     /locus_tag="VLA74_08485"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF50780.1"
                     /translation="MFNSYWSSRLHSSELSLIITNKSINPKNFYKNNNTSFPFVSIIL
                     PARNEKENIKKCLHSLLSQDYCNFEIIAVDDNSSDNTLSIMLEVQKEYNNKQKNKRLP
                     KFVQTKRNYPILKIISLKEKPKDWTGKTWASEQGYLKSTGNILLFTDADTIYKKNVIS
                     YVISYMLSKKLDVITGDPFIELRDFWSKISMPLWKLMSFTLGKDVKDINNPKSKIALL
                     MGCFFMIKREVFESIGTFKSVKSAIQEDQALGVRIKESGYKLRMIPMDNFICALWSRD
                     LSTLWHGIGRTIAPMILKEKEKVFINFVSIILMTTLPHMLLIYTIYLNFVYSNNFAIA
                     NSIHIFDNYYHTLFIFNLIVCLMSLVGIYIKVVKTYKINPLYTLLNPIGSIFLIIAYL
                     STIIPFLLSSKSIEWKGRTFAYKKKNNRIM"
BASE COUNT         1504 a          616 c          479 g         1492 t
ORIGIN      
        1 taaatgacaa gaataatttg aataacatta ctaaagataa ttctaaatta gaggttaatg
       61 taataaactc tccaaatgag acaccatctt tgtcaaaaga agagaaagta attttagatc
      121 ctaaagaatc aaagaatgcc aaagaagcta ctatgacaac agtaactaca atacctaccg
      181 aaggagtaaa tgtagaagca gagacagaat ttacagtacc tttaaaagac aaggaagaaa
      241 atatagaaac agaaactaat attcaagcaa acgcaatgac tgctactcct agccgtgaat
      301 caatattaga atctaaagat ttagaaaatg ttagtcattc cgttgaggaa gaatcatcgc
      361 aattaaaaac caaggttaaa ccagaatctc acgatgacaa tataaaacca catgctataa
      421 cccaagaacc agatagaaaa atattaccat catcacaaga agaacaaacc aataatattg
      481 atacctccaa tccatttatt atgtatacac aatattggca acatattatg tcaaattggt
      541 ttaatacata tgatgaattt ttaaagaatc ttatgaaaat gaatggtttt tggtttggaa
      601 aatcatagaa tgatggcata attattaaaa aaaatccaaa taattttttt ataattgaag
      661 taaaccatca tctttaacat accattaaat cattacgatc tatcaatagc acttatatag
      721 gctgttgtca acctctttca gacttccaca tttattttta agaaataaaa ttaggcatta
      781 tacaatttat acaatttatc tttagtttaa aatcatattt accaaaaata ttattgcagg
      841 caagtattat aaagatacta tctatctgat atcatactga aaccgttaaa atataaaaaa
      901 ctctaataat acatataaat actcattcaa ttatataaat aaaatttcgt tctcgctgtt
      961 attaactgat actaattgct gctttgttgc ataacttgtt taaacaatct ttttcattct
     1021 tctataattg atgatttatc tgatagttat actttgaaac cagttataca atgatgcttt
     1081 cagtattatc tcctttatca tgttctcaaa tctgaaagca gtaacatatt ctccaaacat
     1141 tctcttaatg caggaaaata ctgattccac aatccatcta cttccatagc tcacgctatc
     1201 cttccattta tcaaggtcat ctttctgcat ctttacagtc ttgtttctta aatagtggtt
     1261 ggtctttcta catctggaat tctttcttac ctttattgct ggattgattc ctctaaatga
     1321 tagatattga aaattcttgt tattgtcgta ggaaccatca gcaataacag agtctactat
     1381 tttattctgc attattgtta tatcatctat caatacaggt aatacttttc catcatgtac
     1441 ttgttcactg gttacttgta atgatattat tctcttcttt tttatgtcaa ctgctaaatg
     1501 tatctttaga taacctctct tgatattcca cttatgtcta acccattctc ctctatttgt
     1561 aactttaaca ccagtagaat caatggcaat tataaaataa tcgtcatgtt gtaaactaga
     1621 tttatcatca tcatctattt tgatattcag tctgtttatt cttctgctaa tgttactata
     1681 gtctggaact gacggcaacg tatttgaagc atgtttccta actactcctt ctgtttgtct
     1741 atatggtaag tgaaagtata ctctcatgta acctaataac ttgataaatg aatctggata
     1801 tacaaatttt ctaccttcct tgtccttatt catctcttct agttcattat cccagttatc
     1861 aataacatca aaatcaagca atacttctcc tctctttaca agagattcat tgtacttgtt
     1921 ccagttcaca tgtataatga ctatgaaatg ttagctaaat gtgttaggaa tagtgagttg
     1981 tgcaacaagg cataatatca tccaattcaa ctttaaggta taatgtgaga caatctttta
     2041 ttataccata tctgttgttt atcccctgtc tacttgctaa taaagattaa tttaaacatt
     2101 aattacaaat atctagttgg ctataatctt attgtatatt atcaaattaa atatattatc
     2161 aaattaaatt ttgttagatt gataatctca tttacctaca taattcgatt gttctttttt
     2221 ttgtatgcaa aagttcttcc tttccattca atagattttg atgatagcag gaatggaatt
     2281 atggttgaaa gatatgcaat aataagaaaa attgatccta ttggatttag taaagtataa
     2341 agcggattta ttttatatgt ttttactact ttaatataga ttcctaccag agacattaaa
     2401 cagacaatta aattaaatat aaatagagta tgataatagt tatcgaaaat atgtatacta
     2461 tttgctatag caaaattatt tgaatataca aagtttaagt aaatagtata tattagcaac
     2521 atatgaggta atgtagtcat taaaataatg gatacaaaat taataaaaac tttctccttt
     2581 tctttaagaa tcataggtgc aattgttctt ccaattccat gccataaagt tgaaagatca
     2641 cgagaccaca atgcacaaat aaaattatcc attggtatca ttctcaattt ataacctgat
     2701 tcttttattc ggactcccaa agcttgatct tcctgtattg cacttttaac cgatttaaaa
     2761 gtaccaatac tttcgaatac ttcccttttg atcataaaaa aacatcccat aagcaatgca
     2821 attttagatt taggattatt gatatcttta acatcttttc ctagtgtaaa tgacataagt
     2881 ttccataatg gcattgatat ctttgaccaa aagtctctca attcaataaa aggatcacca
     2941 gttataacgt caagtttttt tgataacata taagaaatta cataagaaat tacatttttt
     3001 ttataaatag tgtctgcatc agtaaatagt aaaatattac ctgtactttt gagataacct
     3061 tgttctgatg cccatgtttt acctgtccaa tccttaggct tttctttgag tgatattatc
     3121 tttaaaattg gataattacg ctttgtttga acaaattttg gtaatcgctt atttttttgc
     3181 ttattattgt attctttttg tacttctagc attatagata aagtattatc agatgaatta
     3241 tcatcaactg cgattatttc aaaattacaa taatcttgag ataataagga atgtaggcat
     3301 ttcttaatat tctctttttc gtttcttgca ggtaatatta tacttacaaa tggaaaagat
     3361 gtgttattat ttttataaaa atttttagga tttatacttt tattagttat tattaaggat
     3421 aattcactgc tgtgtaaacg actcgaccaa taagaattaa acaattttat aaaaagataa
     3481 atccatccaa ataatataga tgtaaataaa ctgataaaaa ctaataaatc agaatataaa
     3541 aaaatatttt tcatactata gctaaaaaaa taataatact catacattac tataatacat
     3601 cctttatttc aaaattgttc tatctccact taaatccata tctaaaatag taaacatatg
     3661 tgaaacgtaa taattaaatc tgattttgct atcaaatgaa tataacattt aaaatacaat
     3721 agactaatcc ttatttaaca attatataat gcgtgttaaa atcatgcatt tgaactccag
     3781 aaatagatat ttattataga aataattaat tacaatgttt ctctaagata aatatgaatt
     3841 ttaatataat atttatctat ttatttaata ctaccattaa ttagataaat aactctcatt
     3901 aaaagtatga tactatttga tcgaataaca attattgaaa aaaagcagat ctaattatct
     3961 tttaaaagaa ggtacgaggt ttataataat tgttatctct ttgtactttc tgttaaacaa
     4021 ggctaaaata attttgtacg atattagaaa aagaatctca aacggaaata aggtaattcc
     4081 aaattaagca g
//
LOCUS       DATIAS010000419         2600 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_75523, whole genome shotgun sequence.
ACCESSION   DATIAS010000419 DATIAS010000000
VERSION     DATIAS010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75523"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VLA74_08490"
     CDS             <1..380
                     /locus_tag="VLA74_08490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50781.1"
                     /translation="TPYHIMNGHVALKAPCEDDSTSQITVLIGSAPNMTAATLENIPS
                     LSNPGEQCLCHVDLIPGGNVTTLTDIAISNTGEEDIEFPPSATVVIGINEVKKGEHGG
                     EHSESTEEHAAATTSLEEAGHTE"
     gene            complement(680..1060)
                     /locus_tag="VLA74_08495"
     CDS             complement(680..1060)
                     /locus_tag="VLA74_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50782.1"
                     /translation="MLEEYNKEKMPWKRVQILKYIAEVQPYLSSIYEANKFVIDDKKI
                     IKIKGIELNNKTTSTIINNNPQIEDNVPAISHNKETNAITTSDKKYNYLNDTSFIDKM
                     ISETIEPEVIAQLEKAKRNCIFYY"
     gene            1183..1500
                     /locus_tag="VLA74_08500"
     CDS             1183..1500
                     /locus_tag="VLA74_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50783.1"
                     /translation="MSNRSVNVELPDEVWKVIDTQFKPLSEETDSEILANIIKNHLAS
                     NGYYLDVDSLVHGIGLKEIVDIIDDKVMSLIDLLEKNDVATYQEWAQIMQKRIIKNTE
                     SFN"
     gene            1788..2072
                     /locus_tag="VLA74_08505"
     CDS             1788..2072
                     /locus_tag="VLA74_08505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50784.1"
                     /translation="MSNDKVWKQMRQRINDPFRYYKKGLKYGDYMLPSGYYVSQTYGA
                     LHKCWLGFVIAKEREEWDKIDLYAIRIQKLEKELGLEITDFSDWGIEYNY"
     gene            complement(2290..2454)
                     /locus_tag="VLA74_08510"
     CDS             complement(2290..2454)
                     /locus_tag="VLA74_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50785.1"
                     /translation="MYSMFVKAYNEEREHGGINGHTPSEMFLMKGTRLNSCKNNKKVK
                     QIKSVTHVGK"
BASE COUNT          885 a          376 c          387 g          952 t
ORIGIN      
        1 ctacaccata tcatataatg aatggacatg ttgctttaaa agctccctgt gaagacgata
       61 gtacttctca aattacagtt ttaattggtt cagctcccaa catgacagca gcaacccttg
      121 aaaatatccc cagtctatca aaccctggag aacaatgtct atgtcatgtt gatttaattc
      181 caggtggaaa tgtaacaacc cttacagata ttgctatatc taatactgga gaagaagata
      241 tagaatttcc accaagtgca acggttgtaa taggtataaa tgaagtaaag aaaggggaac
      301 atggaggaga acattctgaa agtacagaag aacatgctgc tgctaccaca tcattagaag
      361 aagctggaca cacagaataa gaataatcaa tataactttc acacaataaa tttttctttt
      421 tttaattcct aaatattgta aatttattgc tcatatccta taacaggaaa aaacttctta
      481 aaaaaacaag atcattcaaa ggttcatatc tgcttagtac cattaactaa atgggttcag
      541 tatgtaaact taaattatat tacttagagg ataatgaatt tgaatttatt ttatattatt
      601 attagtgata gaatacagat ctccatttaa ctctaatttt gctctttctg tttttatcta
      661 ttttattatt gatgataatt tagtaataaa agatacaatt tctttttgct ttttcaagtt
      721 gtgctatcac ttctggttca atagtttcac ttatcatttt atctataaag gaagtatcat
      781 tcaaataatt atatttcttg tcagatgttg ttattgcatt tgtttccttg ttatgtgaaa
      841 ttgctggaac attatcttct atttgtggat tattattgat gatagtggag gtagttttgt
      901 tattgagttc tatgcctttt atcttaatta tttttttatc atcaattaca aatttgttag
      961 cttcataaat agatgataaa taaggctgga cctcagctat atactttagt atctggactc
     1021 tcttccaagg cattttttct ttattgtatt cttccaacat ctttttttct ctattaactc
     1081 aagtccatct attctctcta aatgctgctg ctggtctttt caaatcaaag ttattaatga
     1141 aataatataa gcactacaac aataaaataa tattgtagaa caatgagcaa tagatcagta
     1201 aatgtagaat tacctgatga agtatggaaa gtcatagaca ctcagtttaa acctttaagt
     1261 gaagaaactg attccgaaat actagccaat atcatcaaga accatctagc ttcaaacgga
     1321 tactatctag atgttgatag tcttgtacat ggtattggac taaaagagat cgtggatatc
     1381 attgacgata aagtaatgtc tctaatagat ctattagaaa aaaatgatgt agctacttat
     1441 caagaatggg ctcaaataat gcagaaaaga ataataaaaa atactgaatc tttcaactaa
     1501 aaaaactatt aaataaattt ttttctttaa caaaaaaata ataattgtta ttatgacagt
     1561 cacaactgtc tatagtatta tgattttttg tttcaatact acttaacata aaaaatattg
     1621 tagggaaaag tttttaaaat atagtacctt tatgtgggac atatacaaag ctatctttaa
     1681 aaaactttta aaactaaact aaattttatt atcagtaggg gtttttttgt tagcttatta
     1741 actttagatt ctaattgttt tatagattga aatcacaaag atataggatg tccaatgata
     1801 aagtctggaa gcaaatgcgt caaagaatta atgatccttt tcgatattat aagaagggtt
     1861 taaaatatgg tgattatatg cttccgtcag gatactatgt ttctcagacg tatggagctc
     1921 ttcataaatg ctggcttggt ttcgtcatcg ccaaggaaag agaagaatgg gataaaatag
     1981 atctgtatgc tataaggata caaaaactag aaaaagaatt aggcttagaa ataacagatt
     2041 tttcagattg gggaattgaa tacaactatt agtattaatt tttatgaata tatattatat
     2101 ccctaaatta tgagtatttc gtaatcttga tttggtttaa tagatctttt gcataattag
     2161 aaagattaca gctatattcc tcttttttag cagttatttc gtagatttgc taaattatga
     2221 taggttatcc agaaaaccat tattattcag gtcatttact tgttgtactt acatacatag
     2281 gtaacagatt cacttaccaa catgggtaac actttttatc tgcttaacct tcttgttatt
     2341 cttacaacta tttaatcttg ttcctttcat gagaaacatt tcagatggtg tgtgaccatt
     2401 gatgccacca tgctctcttt cttcattgta tgctttaaca aacatggaat acattttctt
     2461 tccatcatct gcattgggaa tattttctac tactagaaac taatttttga ctctcttatt
     2521 gtttgcctca attttaccct gtagttgtgg atatctggct ggtatggatt tgtctttaat
     2581 gttgttacgt tgtagaaaac
//
LOCUS       DATIAS010000420         2215 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_75632, whole genome shotgun sequence.
ACCESSION   DATIAS010000420 DATIAS010000000
VERSION     DATIAS010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75632"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..>2215)
                     /locus_tag="VLA74_08515"
     CDS             complement(151..>2215)
                     /locus_tag="VLA74_08515"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSF50786.1"
                     /translation="LKFFEYFLDTKYPYKKYSQVAVDEFEFGGMENTNATTLNENLFH
                     DKTASLDFHDDIRVIVHELAHQWFGDLVTCEDWQDIWLNEGFANYCEALYLDKEYIFN
                     PNSTTTTDQSIRNEFFYKVFSVAKSYLGDAANFYQRAIVTNIYKHPDELLDGHAYAKA
                     GSVLHMLRNMIKDDILFRKALSHYLKEHKFSNSETDDLRQMFEKITGLNLLQFFDQWF
                     YRSGHPEIEIELSLNQSNELQIKIKQVQEGDPFFFSLEAKIVYKSGKEEIKIIEIVNK
                     DQDYKYNLPAGEEQIDWISIDPEFKILKNIKKITILNETSNFQLREFLKQQLLNGETV
                     IEKIEAARELKKHYSEDILEVLKEVIKSPVFYGVGVEAANTIGAFKDDSDWTKTKKAY
                     DTLKECLEDDVFSTLAPQVRQSIVSNIGRFQMEESIPKLKSILDNVNESYFVRSSAAT
                     SLALSSVKLNSKEKKLETISILKDRVNKSNSFRQVIAAGAINGLMQFYNDSDSNIIVD
                     IGTFLIEKTNTKKTNNYYIQIAAINAIRKFVRTKNHLDNTDIIDLNRCVFNRLIELLD
                     VKLLDNSRWQVKIRAATSLVDSDALGPIPDDKTFKTMDILISAIQYDVNGFVQKSIER
                     SLYVLRDYLQKWVSNPPAIEFKRKVGARKKEERKISMELIELTQPERIVQEKILESIR
                     TLELP"
BASE COUNT          684 a          381 c          301 g          849 t
ORIGIN      
        1 tttttctaat atcaaatttg tataataaaa cttttaataa ttcaactgac cccttatact
       61 atatggggcc agtgggatgt ggaactaatt tgacctaaat tttagaccca atatttgatc
      121 tgatatcaat aactgataat aaaaaaattg ttaaggtaac tctaaagttc ttattgattc
      181 gagtattttc tcctgtacaa tcctttccgg ttgcgttaat tctattaatt ccatcgatat
      241 ctttcgctct tctttctttc ttgcaccaac ctttcgttta aattctattg caggtggatt
      301 actaacccat ttttggagat aatctcgaag aacatacaaa gacctttcta tactcttttg
      361 tacaaatcca tttacgtcgt attggattgc ggagattaaa atgtccatag ttttaaatgt
      421 tttatcatca ggaataggac ccaatgcatc agaatcaact aatgatgtag ctgccctaat
      481 ttttacttgc catctcgagt tatccaataa tttgacgtct agtaactcta ttaatcggtt
      541 aaatacacat ctgtttaaat ctattatatc tgtgttgtca agatgatttt ttgtacggac
      601 aaattttctt atagcattta ttgcagctat ttgtatatag taattgtttg tctttttagt
      661 attagtcttc tcaattaaaa atgttcctat atctactata atattcgaat cagaatcatt
      721 atagaactgc atcaaaccat taatagctcc tgctgcgatc acctgtctaa aactattgga
      781 tttatttacc cgatctttaa gaatgcttat tgtttctaac tttttttctt ttgaatttaa
      841 tttaacgcta ctcaatgcta gtgaagtagc tgctgaggat cttacaaaat aactttcatt
      901 gacattatca aggattgatt taagctttgg aatagattct tccatttgaa atctaccaat
      961 gttagaaaca atggattgtc taacctgagg agctagagtg gaaaatacgt catcttctaa
     1021 acattccttc agcgtatcat atgctttttt agtttttgtc caatcagagt catccttgaa
     1081 agcaccaata gtatttgctg cttcaacacc tactccataa aagacaggtg attttatgac
     1141 ttccttcagt acctcaagaa tatcttcaga ataatgtttt ttaagctctc gcgctgcttc
     1201 aattttttca attactgtct ctccgtttag taactgctgt ttcaagaatt ctcttagttg
     1261 aaagttcgat gtttcattaa gaattgtaat tttctttata tttttgagaa tcttaaattc
     1321 aggatctata gaaatccagt ctatctgttc ttcaccagca ggcagattat atttataatc
     1381 ttggtcttta tttacaattt ctataatttt gatttcttct tttccagatt tataaactat
     1441 tttggcttct aatgagaaaa agaaaggatc accttcctga acttgtttta ttttaatttg
     1501 taactcattt gattgattta aagataactc tatttcgatt tcaggatgac ctgatctata
     1561 aaaccattga tcaaagaatt gtagcaaatt taatccagtt atcttctcaa acatttggcg
     1621 cagatcatca gtttcagaat tactaaattt atgttctttc aaatagtgac ttaaagcctt
     1681 tctaaacagt atatcatctt ttatcatgtt tcttagcata tgcaaaacac taccagcctt
     1741 tgcataagca tgaccatcaa gtaattcatc aggatgttta taaatattag ttactattgc
     1801 acgttgataa aaattagcag cgtctcctag atatgatttt gccactgaaa atactttata
     1861 aaaaaactca ttacgaattg attggtctgt tgttgttgtt gaatttggat taaaaatata
     1921 ctctttgtcc aagtataaag cttcacaata gttggcaaat ccttcattta accatatatc
     1981 ttgccagtct tcacatgtta caagatcacc aaaccattga tgtgcaagtt catgtacaat
     2041 cactctaata tcgtcatgaa aatcaagtga ggcggtttta tcatgaaata gattctcatt
     2101 taaagtagta gcatttgtat tttccattcc tccaaattca aattcatcta cagctacttg
     2161 agaatatttt ttataaggat attttgtatc taaaaagtat tcaaagaact ttagt
//
LOCUS       DATIAS010000421         2345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1166293, whole genome shotgun sequence.
ACCESSION   DATIAS010000421 DATIAS010000000
VERSION     DATIAS010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166293"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VLA74_08520"
     CDS             <1..474
                     /locus_tag="VLA74_08520"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HSF50787.1"
                     /translation="HSKISKEKMEIMDPITNEKVLPHVFELSLGIDRSIYSILENSFS
                     EDKDNNRTFLKLKPYLAPIVVGILPLVKKPEIEEIAKQIYTNLKKDFDAYYDESGSIG
                     RRYRRLEEIGVPFAITVDYDSLIDNSVTIRYRDTMEQKRIKIKDLRCFFYENMVI"
     gene            491..886
                     /locus_tag="VLA74_08525"
     CDS             491..886
                     /locus_tag="VLA74_08525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50788.1"
                     /translation="MKIRKRKKNTSTEKSEKEIIPSEKWLVSFKNHNNKSMTRTIIRQ
                     FYAQGYFEAYDIVRTFSEKLDLEIIWFKEKRNCSSLFINKTFPILESICIYCNKIFNG
                     NEPIPCIQEKCIHIFCSLDCRNNHYRLKH"
     gene            complement(931..1530)
                     /locus_tag="VLA74_08530"
     CDS             complement(931..1530)
                     /locus_tag="VLA74_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family peptide modification chaperone"
                     /protein_id="HSF50789.1"
                     /translation="MSNALITKDQVYLQLKKCMDPEIPVNIVDLGLVYDIEINKEKDV
                     DIKMTMTTRGCPLHNTMVNDVKKYVSKINGVGNINVEIVWDPPWSIDKMDPKAREMLG
                     FGKPKLRFQIDYEKALPKKIGSFQKSEDGSLILMNKDERSYMVNDAIVRFWESCDGTK
                     TINQLTDYFSEKLGIPRQQVEQEVVQLLEQLFDAELIQV"
     gene            complement(1606..>2345)
                     /gene="mtnA"
                     /locus_tag="VLA74_08535"
     CDS             complement(1606..>2345)
                     /gene="mtnA"
                     /locus_tag="VLA74_08535"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HSF50790.1"
                     /translation="ALNRIMQKINHMTNIPLIKKVILEEAIIMAEEDISTNKSMGING
                     ANLLSDGDTIMTHCNAGSLATVSYGTALGVIRAAKESGKKINVIATETRPVMQGSRLT
                     AFELQHENIDVCLIPDTAVGYIMAKGMIKHVVVGADRILHTGHVFNKIGTYQLAILAK
                     THNIPFYVVAPSSTFDLKNYPNDIVIEERSKDEVIKIGRKLVAPKNIDVINPAFDITP
                     PELITKIITEKGILSPPYKRSVKKLIE"
BASE COUNT          825 a          356 c          314 g          850 t
ORIGIN      
        1 cattctaaaa ttagcaaaga aaaaatggaa ataatggatc ctattacaaa tgaaaaagtt
       61 ttacctcatg tatttgagtt atcattagga atagacagaa gtatatattc catattagaa
      121 aattcattct ctgaggataa agataacaat agaacttttc taaaattaaa accttatctt
      181 gctcccattg tagttggaat tcttccatta gtaaaaaagc ctgagataga agaaattgct
      241 aaacagattt acactaactt gaaaaaagac tttgacgcct attatgatga atctggatct
      301 attggcagaa gatatagaag attagaagaa attggagttc catttgccat taccgttgat
      361 tatgacagct taatagataa ttccgtaaca attagatata gagatacgat ggaacaaaaa
      421 cgtataaaaa taaaagatct tagatgtttt ttttacgaaa atatggtaat ataattatta
      481 tttatcatca atgaagatta gaaaaaggaa aaaaaataca tcaactgaaa aatcagaaaa
      541 ggaaattatt ccttcggaaa aatggcttgt ctcttttaag aaccataata ataaaagtat
      601 gactcgaaca attattaggc aattttatgc tcaaggatat tttgaagcat acgacatagt
      661 tcgaactttt tcagaaaaat tagatctaga aataatttgg tttaaagaaa aacgaaattg
      721 ttcaagttta tttataaata aaacatttcc catattggaa tctatttgta tctattgtaa
      781 taagatattc aatggtaatg agcctattcc atgtatacaa gaaaaatgta ttcatatttt
      841 ttgttcttta gattgtagaa ataatcatta tagattaaaa cattgaatta ctaaaaagta
      901 attgatacgt cagctacaat ttaagaagta ttagacttga atgagctctg catcaaataa
      961 ttgttctaaa agttgaacta cttcttgttc tacctgttgt ctaggaattc ctaatttttc
     1021 cgagaaataa tctgtaagtt gatttatagt ttttgtacca tcacaagatt cccaaaacct
     1081 aactattgca tcattaacca tataacttct ttcatcctta ttcattagta tcaaggaacc
     1141 atcttctgat ttttgaaatg atcctatttt tttcggtaaa gccttctcat aatctatctg
     1201 aaatcttagt tttggctttc caaatcctaa catttctctt gctttaggat ccattttatc
     1261 aatagaccaa ggcggatccc acacaatttc aacattaata tttcctacac cattaatttt
     1321 actaacatat ttttttacat cattaaccat agtattatgt aaagggcaac ctctagttgt
     1381 catggtcatt tttatatcta catctttttc tttattaatt tcaatatcat aaacaagtcc
     1441 cagatcaacg atattcacag gaatttcagg atccatacat ttttttaatt gaagataaac
     1501 ttgatcttta gttattaatg catttgacat actactatat tcatatttat ggaaaaagat
     1561 gataaaaatg ttatgtgaat aatatattta tttcagttaa acaatttatt ctattaattt
     1621 tttaacactt ctcttataag gaggagataa tattcccttt tctgttataa tttttgtaat
     1681 taattcagga ggagttatat cgaatgcagg attgataaca tctatatttt ttggagctac
     1741 taattttctg cctattttaa taacttcatc ctttgatcgt tcttcaataa ctatatcatt
     1801 tggataattt tttagatcaa acgtagaaga aggagcaaca acataaaagg gaatattatg
     1861 tgtttttgct aatattgcca attgatatgt tccaattttg ttaaaaacgt gtcctgtgtg
     1921 taaaattcga tcagctccaa ctacaacatg tttaatcatt cctttagcca ttatatagcc
     1981 aactgcggta tcagggataa gacaaacatc gatattttca tgttgaagtt caaaggcggt
     2041 caaacgcgag ccttgcatta caggtcttgt ttctgttgca atgacattaa ttttctttcc
     2101 cgattcctta gcagctctta taactcctaa tgcagttcca tatgaaactg tagccaatga
     2161 acctgcatta caatgagtca taatagtatc accatcagat aataaattag ccccatttat
     2221 ccccattgat ttattagtag atatatcttc ttcagccatt atgattgctt cttccaagat
     2281 tacctttttt attaaaggta tatttgtcat atgatttatt ttttgcataa ttctattaag
     2341 agccc
//
LOCUS       DATIAS010000422         5729 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1029772, whole genome shotgun sequence.
ACCESSION   DATIAS010000422 DATIAS010000000
VERSION     DATIAS010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5729
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1029772"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            548..760
                     /locus_tag="VLA74_08540"
     CDS             548..760
                     /locus_tag="VLA74_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50791.1"
                     /translation="MTLPRFIDSSKIQISLAFDKPPDPHCNQRCYERCTMNCEPLCSQ
                     LPLQQRVRCNLKCWKRCQDECCGILV"
     gene            1428..1874
                     /locus_tag="VLA74_08545"
     CDS             1428..1874
                     /locus_tag="VLA74_08545"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF50792.1"
                     /translation="MRLLYRLVVNQHFWLWICIEPIHSSILGIYISEERNMLVAEKFI
                     RSLVEKYGRHTVYTDGGTWYYKACNILRLKHYLHSSIEKSLMEQVNQYLKERIESFDD
                     YYPCMQIECNLFHIHNWIQFFVSMYNDTIANNNNDFELQEVNIILN"
     gene            complement(2399..5488)
                     /locus_tag="VLA74_08550"
     CDS             complement(2399..5488)
                     /locus_tag="VLA74_08550"
                     /inference="COORDINATES: protein motif:HMM:NF015380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clostripain-related cysteine peptidase"
                     /protein_id="HSF50793.1"
                     /translation="MIGSDFESKKYSATDDIREIKEAGITSNINIVLQTGGGINSENS
                     NNIDFSKVQRHQIINGTMHTLKSLGHKNMAEPNTLSDFIKWGISEFPAKKYAIIFWDH
                     GSGIHGFGKDIYFNNDELPPFELFKGFYDGLNSIGVSFDLIGFDACLMSSLETASKLF
                     YFSHYMVASEEIVPEWGWNYTSIIKSLISNTNQSGYLLGKSIIDSYSNSSRHLSKSEK
                     FGTDKEITLSLIDMNKIPQLVKDVNSFSLALKSKISSLDYAINLSKDIDLTERYGQSS
                     FGSTGLIDLYDLTTNIQKTDPELESYIKAIQKSIKSAVVYSYNGTSRPNANGISIYMP
                     LLKNEYSNKAELQVIDIDWLTLLYTQRSMIEYDTLPPVIKSIIEGNTIKGSVYGSDIA
                     NIFAEIIISSSHKNNLNTSLDFVQNIEPSLFIDSNGYFKYTDHKMLVLCNEIECIPSS
                     MNLESNRDKKFVFIPVRLESLNGRVNNTASLVYEVDKDNKFIFLGVNPETNPDETIPK
                     GKAGIPKNTKIFLESRPAKALFKNVKDIKSNNFREISEYLQGGPLLVKNPQKVMPRYV
                     NVSSQFTISFTICDYSDNCDKTRWYHINPNEQAQSIIPQNDQRGYDIKAKEYNNNFPD
                     SIKNAFTYINPTFGFKINYPSDWTKNIQNINDVNEYDLVDPLLVEFIPSQYTESPGSN
                     YYPRLSISVTDWPYKESPKSYFDFFKNSKLFNYTLIEAENITIADNPAFRFVIEYVSP
                     DEQLLGVAKEKHKEMITSVFLNGKMYYITFGTFTSHFDSYLPIVEEMLNSFRPYQNQN
                     QTEINIDRISKGSLPITNRSVNNSFHLDNKKLTDNQNQNETQSYRWSTYNDPMYGYSI
                     NYPSNVWLGKPFPLESINSNVTGNLFILDNSSDVTPEAKEAAQVIIETFYKNETDRLN
                     QNIIGSQIGSLLQNFDLKNIQSIANNELSFFKILPHFQTIQNKSLTLKNNIACIIEIS
                     YYNPNFRSIMQEQKVYITNGEELAIIDFMSNPQKYQQYLPIFQKMIDSFEFQNSDRN"
BASE COUNT         2011 a          788 c          786 g         2144 t
ORIGIN      
        1 attctattga agataaagaa gatgatccct catttttgag cttgtttaga tatgataaaa
       61 tcattcattg atattaaatc aacagatatt gatattgaca tggttattga aagtaattca
      121 aaaaacctct tttgcataat atttgataaa tgaatttata atatttggag aagaattaaa
      181 aaagtagtta tagataatga atacaacgac atcacaattc aattaaatta ataaatgaat
      241 atgttgtgtg tccattattc aaaaaagtat tagatgaaga aaattgttta atgattttta
      301 tcaattgatt tgaattgttc aaaataagtt aaccatataa ttcttatcat taaaaaacat
      361 tctgtataaa atatcaatta ttatgagcaa ttgtactatc acctctgtag gcaacagatt
      421 cacatatcga cattgtaata ttttatctga ataaccaagt tctttctcta accaacattt
      481 ttattatgac ttagatcaca taattgatta caacaacttt taaataatat taatttattt
      541 ctcttttatg actttaccta gatttattga ttcatctaag atacaaatat ctttagcatt
      601 tgacaagcca ccagacccac attgtaatca acgatgttat gagaggtgta ctatgaattg
      661 tgaaccgtta tgtagtcaac tgcctttaca acaaagagtt agatgtaact taaagtgttg
      721 gaaaagatgt caggatgagt gttgtggaat tttagtttaa cgatataatc tctatttaat
      781 tattctaaca tctatgatta tttacattca ttttatttat ttttaatata tatgaaatac
      841 aatcagtttt ggctataaat tcataagtac aagagactaa aaatacatcc ctaacaattc
      901 aagacatatc aaaattaagg tttaggcatt gagatagaca tttctttttc ctatggtgtt
      961 tagatcatat cttctgataa aataaaattt gtttctaaaa acaaaacata agaattatca
     1021 ttattcttag taaaaataaa aaatacggcc tattgatatt ttccaaaaac ccacgtaaat
     1081 attaattaaa tattaagata ttcaaatttg atataaaaca attacacaaa attattcttt
     1141 taatatatat ttaataggct gtgttaattt aaccaaatag ttttagctgt gaatgtctta
     1201 tctctaataa ataaatgctt gttaaattca tcagaaatag aacatccata gttatagtaa
     1261 tgtattctct ttatctatac tttcttggtc ttagtttacg taatacatct taagcactag
     1321 tcatatttag agatgaaaaa agaagttatg tatatgttgg aattggattc agagatttgt
     1381 ttctttacag atttacaaac gcaaaaggat atcaaccttc ataatagatg agactgttat
     1441 acagattggt agtcaaccaa catttttggt tatggatttg tattgaacca attcatagtt
     1501 ctatacttgg aatctatatc tcagaagaga gaaatatgct tgttgctgaa aaatttattc
     1561 gttcattagt tgaaaaatat ggaagacata ccgtttacac tgatggtggt acttggtatt
     1621 ataaagcatg taatatacta agactgaaac actatctaca ttcttcaata gaaaaaagtc
     1681 taatggaaca agtcaatcag tatttgaaag agagaattga atcttttgat gattattatc
     1741 catgtatgca aattgaatgt aatctatttc atatacataa ctggatacaa ttctttgtat
     1801 ctatgtacaa tgatacgata gcaaataata ataatgattt tgagttacag gaggtgaata
     1861 ttatcttaaa ttaacatcca tgaaaatctc tacctgtatc aggtcatcct tatgttcctg
     1921 tcaagcgtaa tactctatta taatttataa tattaaaaat tatctaaaat agcatatgct
     1981 agatatgtta cttttcattc ctttttcatt cattttattt tctttttttt tattttttat
     2041 ttaggcttgc aggcggcaaa catccatcca ccttctttat aaggtaattg tatagccgct
     2101 cggatatcgg ttcagtcaga gcctcactct catacggagt atgttaactt tgaacctagc
     2161 ctatatacaa tagggattgt tacccaataa agattttcat atagtcagag ccgatctttg
     2221 tagtgaatat caaacacaac aacaataaca agagaagatg atgggactaa tactaacaac
     2281 tgtcttatct atctaaaaca aaaaagggaa ttctgattat aagataggga aacaagacat
     2341 aataagggtt atttttagtt cttaaattat acaaatcgat gaattaaatt ctatctattt
     2401 aatttctatc actattttga aattcaaacg agtcgatcat tttttgaaaa attggtaaat
     2461 attgctgata tttttgtgga ttactcatga aatctataat ggccaattct tcaccattag
     2521 ttatgtaaac cttctgttcc tgcattatac ttctaaaatt aggattataa tacgaaattt
     2581 caataataca tgcaatatta ttcttcaagg ttagcgattt attttgaatt gtctgaaaat
     2641 gaggtaatat tttgaaaaat gaaagttcat tattggcaat tgattgtata ttttttaaat
     2701 caaaattttg caaaagtgaa ccaatttggg atccaatgat attttgattt aatctatcgg
     2761 tttcattttt ataaaatgtt tctataataa cttgtgctgc ctcttttgct tctggtgtaa
     2821 catcagaaga attgtctaaa ataaatagat ttcctgttac attcgaatta atactttcta
     2881 aaggaaatgg tttgcctaac catacgtttg atggataatt aatactataa ccatacattg
     2941 gatcattata tgtagaccat ctataacttt gagtttcgtt ttgattttga ttatcagtaa
     3001 gttttttatt gtccagatgg aaactattat tcacagatct atttgttatt ggtaaagatc
     3061 ctttagaaat tctatctata ttaatttctg tttgattttg attttgatat ggtcggaatg
     3121 aattgagcat ctcttctaca ataggcaaat aactatcaaa gtgagaagta aatgtaccaa
     3181 aagttatata atacattttt ccatttagga atacacttgt tatcatttct ttgtgttttt
     3241 cttttgctac tcctaataac tgctcatcag gtgatacata ctcaataaca aatctaaaag
     3301 caggattatc tgctattgta atattttctg cttcaattaa tgtataatta aaaagtttac
     3361 tatttttgaa aaaatcaaaa tatgattttg gagattcttt atatggccaa tctgtgacac
     3421 ttatggaaag acgaggataa taattacttc ctggtgattc cgtatactga gaaggtataa
     3481 attctactag aagaggatca actaaatcat attcgttaac atcgtttata ttttgaatat
     3541 tttttgtcca atctgaagga taattaatct taaaaccaaa agttggatta atataagtaa
     3601 atgcattttt tatagaatct ggaaaattgt tattatattc ttttgccttt atatcatatc
     3661 ctctctgatc gttttgggga attatggatt gagcttgttc attaggatta atatggtacc
     3721 atcttgtctt atcacaatta tctgaataat cacatattgt aaaacttata gtaaattgag
     3781 aagatacatt aacataacga ggcataactt tttgtggatt ttttacaagt agtggaccac
     3841 cttgaaggta ttcagaaatt tctctaaaat tattactttt aatgtccttg acgtttttaa
     3901 ataatgcttt agctggacgg gattcaagga aaattttagt atttttagga atacctgcct
     3961 tgccctttgg aattgtttca tcagggtttg tctctggatt tacacctaaa aagataaatt
     4021 tgttatcttt atcaacttca taaactaaag atgcagtatt gttaaccctt ccatttaacg
     4081 attctaatcg tactggtata aatacaaatt tcttatctct attagattca agattcattg
     4141 atgagggaat gcattctatc tcattacata aaactagcat cttatgatcg gtatacttaa
     4201 agtatccatt actatcaata aataaagaag gttcgatatt ttggacaaaa tccaaagatg
     4261 tatttaaatt atttttgtga gaagaactta ttatgatctc agcaaaaata tttgctatat
     4321 ctgagccata tacacttcct tttatggtat tgccttctat aattgatttt attacaggtg
     4381 gtaatgtatc atattcaatc atggatcttt gtgtatacaa taaagttagc caatcaatat
     4441 ctatgacttg aagttcagcc ttattgctat attcattttt taatagtggc atatatattg
     4501 aaataccatt ggcatttggt cttgatgttc cattataaga atatacaacc gcagacttaa
     4561 ttgacttttg aattgctttg atatatgatt ccaattctgg atctgttttt tgtatatttg
     4621 tagtaagatc gtacagatca attaaacctg tactgccaaa actactttga ccgtaacgtt
     4681 ctgttagatc tatatctttt gaaaggttta ttgcataatc taaactcgaa atttttgatt
     4741 tgagtgctag agagaaactg tttacatctt ttactaattg aggaatttta ttcatatcta
     4801 tgagagataa agtaatttct ttgtcagttc caaatttttc tgatttggat aaatgccttg
     4861 aagaattact ataggaatct attattgatt tacctaataa atatcctgat tgattagtat
     4921 ttgaaatcaa actcttaatt atagaagtat agttccatcc ccactcagga actatttctt
     4981 cagaggctac catataatga gaaaaataaa ataatttaga agctgtttct aaagaggaca
     5041 ttaaacaggc atcaaaacca attaagtcaa aactaacacc aatactattt aatccatcat
     5101 aaaaaccctt aaacaattca aaaggcggca attcatcatt attgaaataa atatctttac
     5161 caaatccatg tatcccactt ccatggtccc aaaagataat tgcatatttc tttgcaggaa
     5221 attctgaaat tccccatttg ataaaatctg aaagagtatt aggttcagcc atatttttgt
     5281 gccctaaact tttcaatgta tgcatagtac catttataat ctggtgtctt tggacttttg
     5341 aaaaatctat attatttgaa ttttctgaat ttattcctcc tcctgtctgc aaaacgatat
     5401 tgatatttga tgtaattcct gcttctttta tctctctaat atcgtcagta gcagaatatt
     5461 tttttgactc aaagtcagag cctatcatat aaatcaaaag agtataatca ccgatgttta
     5521 tacttgaatt tgtaatagaa atttggtctt taaaagaaag tgaatataca tttaaaaata
     5581 gtgtattaaa ataatctaaa taattaagat gaattaaaaa agaggttaaa aaaagaacaa
     5641 taaataagaa agaagctcta gaaaatctgt aatttctttg tctgaagagt tttgtcaata
     5701 taagtctacc tttataccag tattatctt
//
LOCUS       DATIAS010000423         3028 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_894357, whole genome shotgun sequence.
ACCESSION   DATIAS010000423 DATIAS010000000
VERSION     DATIAS010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_894357"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(477..599)
                     /locus_tag="VLA74_08555"
     CDS             complement(477..599)
                     /locus_tag="VLA74_08555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50794.1"
                     /translation="MSKKEIKEFLVPSTFTAKRASIKKRYIIIVRMTFLSGLPK"
     gene            722..1198
                     /locus_tag="VLA74_08560"
     CDS             722..1198
                     /locus_tag="VLA74_08560"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF50795.1"
                     /translation="MQENHYSRILVATDGSTSSIHATDYAISIALKNSSQLFVLYVID
                     AYEYSRLSSSIVLAPTFGSEKYLEEKNEAEKLMNKIKEKFRLKVKDNIKFKEPKTEIV
                     EGVKSVATTIMEYAKSENIDLIIIGSRGRTSFKKLLLGSISSNVMKNAHCAVLVIR"
     gene            1397..1729
                     /locus_tag="VLA74_08565"
     CDS             1397..1729
                     /locus_tag="VLA74_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50796.1"
                     /translation="MSEEFCSKLRIKIEEQKKILSTFARRTDVSQNDKAILLKAEYYL
                     LRLSRVLHVNKVNSVPFRLKESLDAFPKLHDKTMSLPLRNQYQRIIRLLLTIQSALMS
                     NTIDYQQL"
     gene            2094..>3028
                     /locus_tag="VLA74_08570"
     CDS             2094..>3028
                     /locus_tag="VLA74_08570"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF50797.1"
                     /translation="MSDIEINKGKVVVLGGGLAGLTAATLIARAGMLVTIIEKSTETG
                     GRARTSVSDGFYLNQGPHTIYTTGPGVKILKKLGISYTGQKVTTGSYYAFKKGKKYPT
                     PRSLYQLLTTKLLKGLQSKIEAIRFFASLNKINPEFIQDISLEDWINKNIHNTDVKDL
                     VKMFSRITTYANDIETQSAGATIIQLQIAFAGGVIYLDGGWQTLVNGLTAAAQEAGVK
                     ILTGKRVTKIENVNNSTSLPWLIHLSDGNTISSQALIMAVGPKDVYDLLKQSSLVSSS
                     FLSQMIKGANPVRAATLDIALTTLPKPNVFGVYGV"
BASE COUNT         1065 a          481 c          506 g          976 t
ORIGIN      
        1 attaattata ggcaataaca ctatttgtat tccaagttac ctatcaaata ccaaattagg
       61 gccattttca tttatttact cattctttgg ttgaaagcgc tagaaatgga cacatatttt
      121 ttcattatct agtataatca aatagaagtc tgtagaagtt agatttatcc attatatttc
      181 tgtgcattta ttctcgtaat tatttgagaa actaaaattt gaatagacat ttttgtgtat
      241 ataaattact aatataatcc acaaaatgat ctcaaaattt gttagtccaa tgttttccgt
      301 tctttattca atccagttaa cagaatgatc aaaatagtaa acgcaatatt attcccattc
      361 agctgtatct ttttctgcta ttatttttgt aggttttatt cgtacaagaa ttgtgccttt
      421 agtactattt cttttgtcat atacttttgt gttacttttc tccatgttcc atgccgttat
      481 tttggtagcc cacttaaaaa ggtcattctg actatgataa tatatctttt ctttattgat
      541 gcacgtttag ctgtaaaagt acttggcaca agaaattctt taatttcctt tttagacatt
      601 cttgtcatta atgttataat atttaacttt ctaaaaagtg atttctatgt ataccttttt
      661 aaccattata ctgaatgata tttaatatat ctgacactct tttggtacta ttgagataat
      721 aatgcaagaa aatcactatt caagaatttt ggttgctacc gatggttcaa cttcttcaat
      781 acacgcaaca gactatgcaa tttcaattgc tctcaaaaat agttctcaac tttttgttct
      841 gtatgtaatt gatgcttatg aatattctcg tctttcatct tcaattgttt tggctccaac
      901 atttggctca gaaaaatatc tggaagaaaa gaacgaagcc gaaaaattga tgaataaaat
      961 taaagaaaaa tttaggctaa aagtaaagga taatattaaa tttaaagagc ctaagacaga
     1021 aattgttgaa ggagtaaaat ctgttgcgac tactataatg gagtatgcaa aatcagaaaa
     1081 tattgactta attattattg gaagtagagg tagaactagt tttaaaaaat tattattggg
     1141 tagtatatct tctaatgtta tgaaaaatgc tcactgtgca gtcctggtaa taagataatt
     1201 taataataat aataataaat tagaatgagt ttcattatta aatctttaga tggcatacga
     1261 atagataata aacgaaggaa attagcggaa aagagaatca aaagaaaaca aatctaatta
     1321 cctccagcat ttgaatttcg ttactacttt tacttttaaa ggttagttta actatctaat
     1381 ctatgactga taatctatgt ccgaagaatt ttgttctaaa ttaaggataa aaatagaaga
     1441 gcagaagaaa atactctcga cgttcgctag acgtactgat gtttcacaga atgataaggc
     1501 tatattgtta aaagcagagt attatttact tagactgagc cgtgttctcc atgtaaacaa
     1561 ggttaactca gtacccttta gattaaaaga atctctagac gcatttccta agttacacga
     1621 taagacaatg agtttgccgt tgaggaatca ataccagagg ataataagat tactgttaac
     1681 tattcaatcc gcgttaatgt ctaatactat tgattaccaa caattatgat ctagataact
     1741 ttgtaggagg acaccttaca agaataggca ctgtcgatga tattaaacta caccaagaat
     1801 tcatatagga cttgaatgtg atgacagcca agaaagctat attgcaaaag ttgttggatc
     1861 tgccaatcct ggaaacactt gggcaactac taacacatat cttgaaacaa tgactcaaca
     1921 atgtacaaaa gagatgagcg acaaatggta gagtaggttt accctccatt ttactataga
     1981 gttctatgtg cattaaagtc gatatataaa atatgttgga tggccagcca gcaaacaaat
     2041 atatacttct gtcccataaa atatgttgga tggccaacca atatcagttt gggttgagtg
     2101 atatagaaat taataaaggg aaagtagttg tactaggagg aggattagct ggactaacag
     2161 ctgccacact tattgctcgt gccggaatgc ttgtgaccat tatagagaag tcaactgaaa
     2221 caggtggtcg agcaagaaca tcagtatctg acggttttta tctaaatcaa ggtcctcata
     2281 caatatatac tacaggtcct ggtgtcaaga ttctaaagaa acttggaata tcttatacag
     2341 gtcagaaagt tacgacagga agttattatg cattcaaaaa aggtaaaaaa tatcccaccc
     2401 ctagaagcct atatcaactc ctcacaacaa aattactaaa aggattacaa agtaagatag
     2461 aagctattcg attttttgca tctctaaaca agatcaatcc tgaatttatt caagacataa
     2521 gcttggagga ctggataaac aaaaacatcc acaataccga tgtgaaagat ttagtaaaaa
     2581 tgttttctcg cattacaaca tacgccaatg atatagaaac tcaaagtgca ggagcaacta
     2641 taatccagct tcaaatcgcg tttgctggag gagttattta tttggatgga ggctggcaaa
     2701 cattagtaaa cggattaact gcagctgcgc aagaggcagg tgtaaagata ttgacaggta
     2761 aaagagtaac aaagatagaa aatgttaata atagtacatc tctgccctgg ttaatccatc
     2821 tctctgatgg aaacacaatt tcatctcaag ccttaataat ggcagttggt ccaaaagatg
     2881 tatatgatct cctgaaacaa agtagtctag ttagctcctc ttttctatcc cagatgatta
     2941 aaggagcaaa tccggtaaga gcagccaccc tagatatcgc tttgactact cttcccaagc
     3001 ctaacgtgtt tggtgtatat ggtgttga
//
LOCUS       DATIAS010000424         2319 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1847615, whole genome shotgun sequence.
ACCESSION   DATIAS010000424 DATIAS010000000
VERSION     DATIAS010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1847615"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VLA74_08575"
     CDS             <1..1008
                     /locus_tag="VLA74_08575"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSF50798.1"
                     /translation="KSESISLDHFIESQIDLVSKSNIERWINSLTSFHNRHSKSIYIH
                     QVANWLKKELEIAGYKDKDKIKEKDKDKYKDIVDFHVFRENGLELKNVICHKQGETNK
                     IIIICGHYDTVLSDNVEDTVSRAPGANDNASGLAAILEIARILFSVDLKYSIRFALFS
                     GEEQGLRGLEHYADGIKREKEDLTLLINLDMIGVPDYHAINKTIEKEDMIIQHNVSAI
                     KKTIQIDVDKEFENQPSCNEIKENDKESDRYGTIMEQMAENYTDIQGEKGSVYSSDYC
                     PFERLGYVVIGAYDRSAELDNPHYHSSSDIPANLDMEYLTSVTKMVLATILHVNRKNS
                     S"
     gene            1654..>2319
                     /locus_tag="VLA74_08580"
     CDS             1654..>2319
                     /locus_tag="VLA74_08580"
                     /inference="COORDINATES: protein motif:HMM:NF024306.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSF50799.1"
                     /translation="MIDTRQEIIYALNEAAEIEHGFMIQYIFAAMSMKKYINEKITRE
                     QQELIRKWESDILSVAREEMAHLGTVCNLLSAVGGAPHFERPNFPQKATQYYPFDFVL
                     SRFSDESLYRFIRFELPKGEPLPPPPKQLSKSKLFALFPIAPDPIEYDYLGELYNKIR
                     YGFNTLPEDDLFIGPKGSQDYEYWSRRMEVLRVTDRKSANTAIDFIIEGGEGSPENRE
                     GSHY"
BASE COUNT          854 a          303 c          377 g          785 t
ORIGIN      
        1 aaaagtgaat caatatcact tgatcacttt atagaatcac agatagattt agtatctaaa
       61 agtaatatcg aaagatggat caatagtctt acatcttttc ataatagaca tagtaaatcc
      121 atatatatcc atcaagtagc caattggctt aaaaaagagt tagagattgc tggctataaa
      181 gataaagaca agattaagga gaaagataaa gataagtata aagatattgt tgattttcac
      241 gtattccgag aaaatggatt agagttgaaa aatgttattt gtcataaaca aggtgaaaca
      301 aataaaatta ttattatttg cggacattat gacactgtat taagtgacaa tgttgaggat
      361 acagtttcta gagctccagg ggctaatgat aatgctagcg gattagcagc aatcctagaa
      421 atcgcacgta ttctattttc tgttgattta aaatatagta ttcgatttgc attattctct
      481 ggtgaagaac aaggtttaag gggtttagaa cattatgctg atggtattaa aagagagaaa
      541 gaagatctta ctctacttat taatttagat atgattggtg taccagacta tcatgcaatt
      601 aacaagacca tagaaaaaga agatatgatt attcaacaca atgtttctgc cattaaaaaa
      661 acaatacaaa tagatgtaga taaagaattt gaaaatcaac catcttgtaa tgagataaaa
      721 gagaatgaca aagaatcaga tagatatggt acaataatgg aacaaatggc tgaaaattat
      781 actgacatcc aaggtgaaaa gggttctgtt tattccagtg attattgtcc gtttgaaagg
      841 ctaggatatg tagtcattgg agcatatgac agatcagccg aattagacaa tcctcattat
      901 catagttcct ctgatatacc tgctaatctt gatatggaat atcttacatc agtaactaaa
      961 atggtgcttg ctactatttt acatgtgaat agaaaaaatt catcatgata gttgcttgtt
     1021 atactgcagc gaatttctaa aaatttgcca tcaactgatg tacattttgt actataatat
     1081 atggtgtaaa agtgttaaag taataaatat ttggataata aaaaaaattt tagaatgtaa
     1141 ctaaatgccc aaatcttttt tattgttatt ataacaaata ataataatca atattcttca
     1201 tttgaattgc aaaaatgtgt caaaatcagt tgatatacct ccgtttgaac ttatctatta
     1261 accatctact tttactaatc taatttttcg gcgcctcaaa agttaaacta tgattatggt
     1321 tttgattttt attaacatta tttatattta taattggata tttctattag ctatattcgt
     1381 tggctatgtt attatttttt aaattaatgg attttcaact ttttatcttc ttcacaatga
     1441 aatttatatc gtttaataaa gtggaactag tcatttaact aatattcaga ttaaatttca
     1501 gattaaactt agtagaatat agcacattgt aaacatgttc tatgatctta aagaaagcaa
     1561 ccaaaaacaa atttttgaat ataccagaat gaagaaatat atttttatat tattttataa
     1621 ttagaagtct tactatttaa ggatagaaat aatttgattg atacaagaca agaaatcatt
     1681 tatgctttaa atgaagctgc agaaattgaa catggtttta tgattcaata tatctttgct
     1741 gctatgagca tgaaaaaata tattaatgaa aaaataacta gagaacaaca agaactaata
     1801 cgtaaatggg aatcagatat tctatctgtt gctcgagagg aaatggcaca tttgggaact
     1861 gtatgtaatc tattgtctgc tgtaggtggc gcgcctcatt ttgaacgtcc gaattttcca
     1921 caaaaggcaa cacaatatta tccatttgat tttgtgttat cacgtttttc agatgaatct
     1981 ctttatagat ttattagatt tgaattacct aagggtgaac cacttccacc tccaccaaaa
     2041 cagctttcta aatctaaatt atttgcttta tttccaattg caccagatcc tatagaatac
     2101 gactacttgg gggaacttta taataaaatt agatatggct ttaatactct cccagaagat
     2161 gatcttttta ttggaccaaa aggtagtcag gattatgaat attggtctag acgtatggaa
     2221 gtattaaggg taactgatcg aaaaagcgca aatacagcta ttgatttcat aattgagggt
     2281 ggtgaggggt ctcctgaaaa tagagaaggt tctcattat
//
LOCUS       DATIAS010000425         4482 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_349369, whole genome shotgun sequence.
ACCESSION   DATIAS010000425 DATIAS010000000
VERSION     DATIAS010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4482
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349369"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VLA74_08585"
     CDS             complement(<1..320)
                     /locus_tag="VLA74_08585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSF50800.1"
                     /translation="MSSGIKTNESPRHFMVLDALARGIKDLNKISKITKLAREEVELI
                     TNDLISQKLVIKKEKRSFFGNKKREISITETGIRLLNAKKEELEQKWRKAQQIYNNGQ
                     GNKA"
     gene            complement(403..1674)
                     /locus_tag="VLA74_08590"
     CDS             complement(403..1674)
                     /locus_tag="VLA74_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF50801.1"
                     /translation="MDIFLPSVVFNALSFTNLGSSEFIVQDFAVIMVMAAVMLFITHK
                     LKQSMVVGYLLAGMIIGPYTPPFSLIKNVETINVFAELGIIVLLFVIGIEFPIAKLRQ
                     IGRISMIVGLTESIGTMLITFFVAQNLGFTVFDSMFLALAMSITSTVVTIKILEEMGK
                     IKERSSILILGVLIVEDIIAVTTLAILQSIASASGTDDISIISISISIAIAIVFIGTI
                     LILGSRFLPNLIDKIGKTNDYALLLIVIMGLAFGLSFIANILGLSVVIGAFLAGVLVA
                     ESKSATVAKVITIPLRDIFSALFFISIGALVNISVIPMFIIPAMILILTAFASKLLLV
                     LAVLAKSKFDNIDRLKAGLGLASAKGEMSLVIAKGGQDVGAITSSVLPILSVVTIITA
                     FASPYIIRFAHNIKSTKTEYKGDDEVKTNID"
     gene            complement(1772..3325)
                     /locus_tag="VLA74_08595"
     CDS             complement(1772..3325)
                     /locus_tag="VLA74_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HSF50802.1"
                     /translation="MGKKSSKIHIIRIIIKLFPIIINFRRDRREWVKKEGKDIDESKY
                     KSHAKMALKVFIELGPSYIKLGQWLSSRSDILPQPYLEVLSTLQDDVPVEPFEKVKKT
                     IEEELGQIDLIFESFNIEAFSGASLGQVYHAKYRGEDVVVKVARPNIEQIIEKDISIM
                     KRLIPIGTRFIDPNLRFSVEGMFSQFIETIYEEMDYLKEAKNLLAIKKNLKNEENIVI
                     PNLLPELTSKHIITTEYVPGIKITDIKSLDKIGIDRQKLVILLHHIFFKMLLRNSIFH
                     SDPHPGNIAVKDDGSIILYDFGMVGRLDNETRLLLIRLYLGLIDKDPIRTVDVLIQLG
                     TLEHTVNRNVVEKALELSIRSLHGKKVDRMEVKSLMDLSNKTLSKFPFRLPKNLALYM
                     RMTSILEGIYNQHRIKFQFAKVLSNLLEQEGLLKEAYIEELKFSFQKFLKNIEISSNL
                     SEMLKTFLENQDSRTKTVNKHNRIMAVSIFSSALFIGSAILFSYNQIFSYIGLVGSGI
                     VFLLNFVKK"
     gene            complement(3327..3761)
                     /locus_tag="VLA74_08600"
     CDS             complement(3327..3761)
                     /locus_tag="VLA74_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50803.1"
                     /translation="MNFIDGDRNILVPKSVRPIMDYDKTVLGSRKNAKKQYRYGNLHI
                     REYNDYYSLHMDSVDPREDPIGHLIKDAPEEIICLILASSFGSKIGRSYYNKKKSEND
                     KTSSAISKAAIMGTLTGITTYFVSKYIFSITKKNSRINIEDE"
     gene            3888..4457
                     /locus_tag="VLA74_08605"
     CDS             3888..4457
                     /locus_tag="VLA74_08605"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HSF50804.1"
                     /translation="MKDIKLLSSKKVYSGKISVRMDEFVLEGKRIQKEVVEHSPSVGI
                     IPILPNNDIFLITQYRRAAGKVLLEIPAGKIENGENKEQAAKRELLEEIGYSGKFTFL
                     TQWYLAPGYDTELMYIFLVTNLKKRYHKQYLDDDENIKLKKYSFQTAIEKCVTGEIVD
                     CKTVAALFLYKEYIELFNKRIRKLNNNQR"
BASE COUNT         1513 a          703 c          617 g         1649 t
ORIGIN      
        1 tgtgctttat tgccttgtcc attgttgtaa atctgttgag ctttacgcca tttttgttcc
       61 aactcttctt tctttgcatt taaaagtcta ataccagttt ctgttattga aatttctctt
      121 tttttgttac caaaaaaact ccttttctct ttttttatta ccagtttttg agatattaaa
      181 tcatttgtta tcaattcaac ttcctctcta gccagttttg ttatttttga aatcttattg
      241 agatctttaa ttcctctagc taatgcatcc aaaaccatga aatggcgcgg actttcatta
      301 gttttaattc cagaagacac cctattttat attgagataa atagtaattt aaatcctttt
      361 tttactcata gctgaataat gtttaaatct ctattttgag tattagtcta tattcgtttt
      421 tacttcatca tctcctttgt attctgtttt tgtggatttt atgttatgtg caaatctgat
      481 tatgtaggga gatgcaaaag ccgttatgat tgttactacg cttaatattg gaagaactga
      541 ggaggtaata gcaccaacat cctgtcctcc ttttgcaatg acaagggaca tctctccttt
      601 tgcactggct aatcctaatc ccgccttgag tcgatctata ttgtcaaatt tagatttagc
      661 taatactgct aaaaccagca ggagttttga tgcaaatgct gttaatatca atatcattgc
      721 tggaattatg aacattggta taacagaaat attgaccaaa gctcctatgg atataaagaa
      781 taaagcagaa aatatgtctc ttaaaggtat agtaataact tttgcaactg tagcactttt
      841 tgattcggca actaaaactc ctgctaagaa tgccccaatt actactgata aacctaaaat
      901 atttgcaata aaagataatc caaatgcaag tcccatgatt acaattagaa gcaaagcata
      961 atcattggtt tttccaattt tatctatcaa atttggtaaa aatcttgaac cgagaataag
     1021 aatagtacca atgaatacta ttgcaatagc gatcgaaatt gagatcgata tgatggaaat
     1081 atcgtctgta cctgaggctg atgctatgga ttgaagtatg gccaaagttg taaccgctat
     1141 aatatcttca acgatcaaaa caccaagaat caatattgat gatcgctcct ttatttttcc
     1201 catttcttcc agtatcttta ttgtgacaac tgtacttgtt attgacattg ctaaggccaa
     1261 aaacattgaa tcaaaaaccg taaaacctaa attttgagca acaaaaaaag taatcaacat
     1321 tgttcctatc gattcagtca atccaactat catagaaatt cttcctattt gtctcagttt
     1381 agctattggg aattcaattc ctataacaaa taaaagcacg attattccaa gttctgcgaa
     1441 tacatttatc gtttctacat ttttgataag tgaaaaagga ggtgtatatg gaccaataat
     1501 cattccagct aataaatatc cgacaaccat tgattgtttt aatttatgtg ttatgaaaag
     1561 cataacagct gccattacca taataactgc aaaatcttgt acgatgaatt cagatgatcc
     1621 taaattagta aatgataatg cattaaaaac aacactgggc aaaaaaatat ccatgatcca
     1681 aattaaatat aaacatctaa aataaaaatt aagaggataa attcctagat aaaaatttta
     1741 gtattaataa tttctaattg ttacctttag tttacttttt aacaaaattt aataaaaata
     1801 caataccaga gccaactaat ccaatatagg aaaatatttg gttgtatgaa aataaaatag
     1861 ctgatcctat aaacaaagca gaagaaaaga tgcttaccgc cataatccta ttatgtttgt
     1921 taacggtttt agttcgagaa tcttgattct ctaaaaatgt ttttagcatt tctgacaaat
     1981 tagatgagat ttctatattt tttaagaatt tttgaaacga aaattttaat tcttcaatat
     2041 atgcctcttt taaaagtcct tcttgttcta ataaatttga taaaactttg gcaaattgaa
     2101 atttaattct atgttgatta taaattcctt ccaaaattga agtcattctc atgtataaag
     2161 ctaggttttt gggtaatcta aatggaaatt tacttaatgt cttgttagat agatccatca
     2221 atgatttaac ttccatcctg tcaacttttt ttccatgcaa agatctaatg ctcaattcta
     2281 atgctttttc tactacatta cgattaaccg tgtgttctag agttcccaat tgtataagta
     2341 catccacagt tctgataggg tccttatcta ttagcccaag atatagtcta attaacagaa
     2401 gtctcgtttc attatccagt cttccaacca ttccaaaatc atacagaata atagatccat
     2461 catctttgac tgctatattt cctggatgag gatcggaatg aaaaatacta tttcttaata
     2521 acattttaaa aaaaatatga tgtagaagta taactaattt ttgtctatct atgcctattt
     2581 tatctaatga ttttatatct gtaattttta tacccggtac atattctgta gtgatgatat
     2641 gttttgaagt caattcaggc aatagattag gaatcacaat attttcttca ttttttaaat
     2701 tttttttaat agctaacaaa ttttttgctt cctttaaata atccatttct tcatagattg
     2761 tctcaataaa ttgtgaaaac ataccttcta ccgagaagcg caagttagga tcaataaatc
     2821 tagttccaat aggaataagt cttttcataa tagaaatgtc cttttcaata atttgttcta
     2881 tattcggtct tgccactttt acaacaacat cttctcctct gtattttgca tgatatactt
     2941 gtccaagact tgctccagaa aaagcttcga tattaaatga ttcaaaaatt aagtctattt
     3001 gtcccaattc ttcttcaata gtttttttga ctttctcaaa aggttcaact ggtacgtcgt
     3061 cttgtaatgt cgaaagaact tctagatatg gttgtggtaa tatatctgaa cgggacgata
     3121 accattggcc taattttata tatgaaggtc ccaattcaat gaatactttt aatgccattt
     3181 ttgcatggct tttatattta ctttcatcaa tatcttttcc ttcttttttt acccattctc
     3241 ttctgtctct tctaaaattg attattatag gaaataattt aataatgatt cttatgatgt
     3301 gtattttaga acttttttta cccattctat tcgtcttcaa tatttattcg ggaatttttt
     3361 ttggtgatgc taaaaatata tttagataca aaatacgttg tgattcctgt caaagtaccc
     3421 attatcgctg cctttgagat agcagatgag gttttgtcat tttcactttt tttcttatta
     3481 taatatgatc ttcctatttt gctaccaaaa gatgatgcta aaattaagca tattatttct
     3541 tctggagcat cttttattaa atgtccgata ggatcctctc taggatctac actgtccatg
     3601 tgtagactat aatagtcatt atattctctg atatgtaaat ttccatatct atattgtttt
     3661 tttgcatttt ttctactacc taaaactgtt ttatcataat ccattattgg tctgacagat
     3721 ttaggaacta aaatattcct atcaccgtca atgaaattca tccatatact ttttcataaa
     3781 tgtcatataa aattaactta tttttagcta taatgaatat tgccttaagt attgagagtt
     3841 aatattattc taggaaagaa tattttatgt gtagagatga aaaatatatg aaagacatca
     3901 aattattaag cagtaagaaa gtttattcag gaaaaatatc tgttcgaatg gatgaatttg
     3961 tgctggaagg aaaaagaatt caaaaagaag ttgttgaaca ctctccttct gttggcatta
     4021 ttccaattct cccaaataat gacatattct tgatcactca atatagacgt gctgcaggaa
     4081 aggttctatt agaaattcca gcaggaaaaa ttgaaaatgg agaaaacaaa gagcaagctg
     4141 caaaacgaga attattagaa gaaataggat actcaggaaa atttactttt ttgactcaat
     4201 ggtatttagc accggggtat gacacggaat tgatgtatat tttcttggta actaatttaa
     4261 aaaagagata tcataaacaa tatttggacg atgatgaaaa tattaaatta aaaaaatatt
     4321 cttttcaaac tgccattgaa aaatgtgtaa caggtgaaat agttgattgc aagacagttg
     4381 ctgcattatt cctttataaa gaatatatcg aattatttaa taaaagaata agaaaattaa
     4441 ataacaatca aagatgattc tttgtaaact tagataatat tc
//
LOCUS       DATIAS010000426         2023 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1030196, whole genome shotgun sequence.
ACCESSION   DATIAS010000426 DATIAS010000000
VERSION     DATIAS010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1030196"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VLA74_08610"
     CDS             <1..474
                     /locus_tag="VLA74_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50805.1"
                     /translation="INRTDNPNPEILYKNLAEIFAKTLDRIGMGSREDGNESRREIML
                     HSFRRWVKSTIFDLGYSDYSEWFIGHSGSTYWRKKDSEKAEIFQKIEPYLTFLNVPQL
                     ERQGADLQTKIEELQLINQSLRENDKVKEDALAHLSDQLLVLSERIQQLERKQML"
     gene            complement(502..798)
                     /locus_tag="VLA74_08615"
     CDS             complement(502..798)
                     /locus_tag="VLA74_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50806.1"
                     /translation="MNYLNFTTYLFFIVSLIVSVFTSTGYARTADPLIPNTIDNKVNT
                     NLPFVFDYSLSIADLFTMISSLTALVTVVILLYNYKKQNALFNSQIKHYEEILS"
     gene            complement(1193..1486)
                     /locus_tag="VLA74_08620"
     CDS             complement(1193..1486)
                     /locus_tag="VLA74_08620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50807.1"
                     /translation="MESKIHSTIVITSFLVFALIATGIISTAFVNVNAQGENQTMQDA
                     EQSANKTMERAIQSANETGQDVKQTIDKVGSKITEGAKDLAGNIGDKLQDLAK"
BASE COUNT          742 a          275 c          289 g          717 t
ORIGIN      
        1 ataaatcgaa cggataatcc aaacccagaa atattgtata aaaatttagc agaaattttt
       61 gcaaaaactt tagatagaat tggaatgggt tcaagagaag atggaaatga gagtagacga
      121 gaaataatgt tgcattcatt cagaagatgg gtaaaatcca caatattcga tttgggttat
      181 tcagattatt ctgaatggtt tattggtcat tctggttcta cttactggcg aaaaaaggat
      241 agcgaaaaag cagagatatt tcaaaaaata gaaccttatt tgacttttct aaatgttcca
      301 caattggaaa gacaaggagc agacttacaa acaaagatag aagaacttca actaataaat
      361 caatcactaa gagagaatga caaggtaaag gaagacgcat tggctcattt atctgatcaa
      421 ctattggttt taagcgaaag aatacaacag ttagaaagaa aacaaatgtt ataatctgta
      481 aattatatca tgaaaaatga gttaagaaag tatttcttca tagtgtttga tttgggaatt
      541 aaaaagcgca ttttgttttt tataattata cagaagaata acaactgtaa ctaaagcagt
      601 gagagatgaa atcatagtga ataaatctgc aatcgataag gaataatcaa atacaaaagg
      661 cagatttgta ttcactttgt tatctatagt atttggtatt aggggatctg cagttctagc
      721 atatcctgta gatgtaaaaa ctgagacaat taaactaaca ataaaaaata aataagttgt
      781 aaaattaaga taattcatat cttaacaagt agttttaaaa cttaaatcct tcttctacaa
      841 aattattttt tactacaaat tattcaaatt attttgattc taaatattca gatattgcaa
      901 tttctaaaat actgctaaaa aattcttcag cctcatgact aattctacag tgtttgcaat
      961 actctttttc tcatcttttc tcctttttgt tttcttacct tcctgttatt agtaagagaa
     1021 tttatgtata aaatactatt taatcccaac ttattaatag gcctaaaggt cacaatatta
     1081 ttaacaatac taacccaaaa taactgatta tattatataa aagattagat gatgcagtat
     1141 aagaaaaaaa tcaaatagaa attattaata ttttaaaaat attactttgt atctatttcg
     1201 ctaaatcttg taatttatcg ccaatatttc cagccaaatc ctttgctccc tcagtaattt
     1261 tagagccaac tttgtcaatt gtttgtttaa catcttgtcc agtttcattg gcagattgaa
     1321 ttgctctttc catagttttg ttagcagatt gttcagcatc ttgcatggtt tgattttcgc
     1381 cttgtgcatt aacattaaca aatgctgttg atattattcc tgttgcaatt aaagcaaata
     1441 caagaaaaga tgtaataact atcgttgaat ggatttttga ttccatatca attttagtta
     1501 aatataacta ttattaaaag ccatagcctt cctattatta tcactgaata ccatctctat
     1561 gcgagaaaag gctatggcct tgtggacatt gtcgtattta gttaggttgt taattacttg
     1621 tattgctgct aattatgtta tttaataact ttgtataatt taattaattt attagtaata
     1681 aaaaagaaag ccatagccct ctttttttag caaaactggt atgacaaata ccttggtttt
     1741 tttgcagtag aaagttatgg caaacaaact actgactttt ttattctttt ggtatgtata
     1801 ttatcgataa tataatatat aataatttga tgagatagat agatgctaga caatgatttt
     1861 actcattatc aacatctata cacaaatatt tgagattttc atccctcctg aatgtgtata
     1921 tatttatgtt ctttaaaata taaaacactt tgagacaaat tatttaattg tcatagtcta
     1981 aaccggagat ctaccaagtt cagactatga catatatatg tct
//
LOCUS       DATIAS010000427         3890 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_214089, whole genome shotgun sequence.
ACCESSION   DATIAS010000427 DATIAS010000000
VERSION     DATIAS010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3890
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214089"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..492)
                     /locus_tag="VLA74_08625"
     CDS             complement(<1..492)
                     /locus_tag="VLA74_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50808.1"
                     /translation="MIVDNNEIIAKQDLNKENFPDGFSNRESKIIDIAFVLPSFTMAA
                     YDDSFYNFFRSHSDIKAGQYVSVDIHLLSSQVPSGIDAMNNHKSIALHKIRDNLSFLL
                     PSSNFNDLDDKMVDEGLIFEANGANIYDIIILVHQEYVTQEEYSNFKKFVENGGIMIL
                     LDSN"
     gene            complement(975..1232)
                     /locus_tag="VLA74_08630"
     CDS             complement(975..1232)
                     /locus_tag="VLA74_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF50809.1"
                     /translation="MKYRSRTEIVGMILDAANGGTTKTKIMYKAFLSYAQLKEYLSVL
                     IENKLLDYIDGTQTYKTTEKGLNFLKMHNEIGDLLRIPTRL"
     gene            1493..2485
                     /locus_tag="VLA74_08635"
     CDS             1493..2485
                     /locus_tag="VLA74_08635"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03557 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HSF50810.1"
                     /translation="MIKISVQAAHEQNNPSDLLDHVTYMDNKGIQRCWTSDHYMPWWH
                     SGASGGAAWPWLGAALAKTRNIAIGTGVTAPILRYHPAIVAQVFSTLSSMFPNRVFLG
                     LGKGEALNEITSGNPWPSNQERHKRLKEAIKLIKKLWKEDWVTFDGEYYWVKDSNLYT
                     KPKGDIPIYIAGNGPQSAQLAGEEGDGFITTSADFEILKNRLIPAIQKGLKKSGKDYE
                     KFSRILFMHTSYDEDRNKALESLRFWRGVLIKAFFELDIHDPRKIEENCRVIQDDSLE
                     KNFFVISDAEEAIKKIKQYKDLGFTEIVLTNSSPSRYKLIDLLSDKVIPAVNLQ"
     gene            3214..3651
                     /locus_tag="VLA74_08640"
     CDS             3214..3651
                     /locus_tag="VLA74_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50811.1"
                     /translation="MNVREYLMDSCIPIRLACINVDGWPITVSLWYVYLEEKIFCATQ
                     RNAKVIEYLSKNPKCGFEVAGDLPPYRGVRGWGYAKLDKVRGVEILYMLIKKYLRDEK
                     SSLANFLLGRNENEMAIEITPLSIFSYDYSDRMKDIVVNRKKV"
BASE COUNT         1380 a          558 c          617 g         1335 t
ORIGIN      
        1 gtttgagtct aaaaggatca ttattcctcc gttttctaca aattttttaa aattactata
       61 ttcttcttga gtaacatatt cctgatggac tagaatgata atgtcataga tatttgcacc
      121 atttgcttca aagattaatc cttcatcgac cattttatcg tcaagatcat taaaattcga
      181 cgatggaaga agaaaagaaa gattatctct gatcttatgt aatgctatgg atttgtgatt
      241 attcatagcg tctattcctg acggaacttg agaggacaaa agatgaatat ctacagatac
      301 atattgtccc gcttttatat cagaatgaga tcgaaagaaa ttataaaaag aatcatcata
      361 tgcagccata gtaaaactag gcaacacaaa agctatatca attatctttg attcacggtt
      421 tgaaaaacca tcaggaaaat tctctttgtt taaatcttgt tttgcaatga tttcattatt
      481 atcgactatc attttattta tttcgttaat ttttacctga tttttgtcaa agtattcatc
      541 ttcataataa aaataagtat cgtctgcaac ctcagctatt atttcttgct cctaaaataa
      601 agagatactc aaggaagaca attatacaat gatgacaata attgtcactg taaatattaa
      661 cacgtttttt tataactaaa ttagcatata ataaaagcta tagattgtta taaattactt
      721 gtaatattat tttattctaa aatacttcta aaaactggat ttctaagcca aatctagggg
      781 ataaaattct cattttttaa tgaattataa aatttcagat atattactta ctaatatgat
      841 tgtccaataa aaaacacatc aagaaatatt agaaaataga tagtacttaa ctacaatatc
      901 atttgtttct ttttatattt aaaatatact gttagattat ttaaaaaaag aaaagagtaa
      961 actgtaatta attattataa ccttgtagga attcgcaata gatcgccaat ctcattatgc
     1021 atctttagaa aattcaatcc cttttctgtt gtcttgtatg tctgtgttcc atcaatatag
     1081 tctaaaagct tattttcaat caaaacagaa aggtattctt ttaattgtgc ataacttaaa
     1141 aaagctttat acataatttt tgttttggtt gttcctccgt tagctgcatc gagaatcatt
     1201 cccactattt ctgttctact tctgtatttc atgttttata gtaagatctt ttagttattt
     1261 aatttttcta ttaaaaattt cataaaataa tacttaagat ttgtaattgt cacttaatag
     1321 acaaagatta cagttaaatt cttcctttct attgatttcg ttttaacaat ttcctttttt
     1381 cttcaaaagt gataatatat ataaaaattt agtaagatat taaaaaatgc acgaaaggca
     1441 tccttgactt taagttatta tttagttgtg attatatact aggtatactc caatgattaa
     1501 aatcagcgtt caagcagcgc atgaacaaaa caatccttca gatttactag atcatgtaac
     1561 gtatatggat aacaaaggta tacaaagatg ttggacaagt gaccattata tgccatggtg
     1621 gcacagcggt gcttcagggg gtgctgcatg gccatggctt ggagcagcat tagccaaaac
     1681 tcgcaatatc gctataggaa caggagtgac tgcacctatc ctaagatacc accctgcaat
     1741 tgttgcacag gtattttcaa cgctaagttc catgtttcca aatagagtat ttttgggttt
     1801 gggaaaagga gaagccttaa atgaaatcac atcaggtaat ccgtggccat caaatcagga
     1861 gagacataaa cgattgaagg aagccataaa actcatcaaa aaattatgga aagaagactg
     1921 ggtaacattt gatggtgaat attattgggt aaaagactct aatctgtata caaagcccaa
     1981 aggagatatc cccatatata ttgcaggcaa tggccctcaa tcggcccaac ttgctgggga
     2041 agaaggtgat gggtttataa ctacttcagc ggattttgaa attctaaaaa atcgtttaat
     2101 tcccgcaata caaaaaggat taaaaaaatc tgggaaagat tatgagaaat ttagtaggat
     2161 attgtttatg catacctctt atgatgaaga tagaaataaa gcactagagt ctctgcgatt
     2221 ttggagaggt gttcttatca aagcattttt cgagttagat attcatgatc ctagaaaaat
     2281 cgaggaaaac tgtcgagtaa ttcaagacga cagcttagaa aagaattttt ttgtgatatc
     2341 tgatgcagaa gaagcaatca aaaaaataaa acaatacaag gatcttggat ttacagaaat
     2401 agttctaact aattcaagcc catctagata taaattgata gatttattat cagacaaggt
     2461 aattcctgca gtgaatttac aataaaacca ctttgataat tatattcagt tgattctttt
     2521 cttctaaatt gtattccata taatcacgat aactgcgctt tctaaagcaa ggttaaataa
     2581 tcatgacggc aacatgatga tctagcctac aagaatgctt gctgatttca gtaaatgaat
     2641 gtgttagata ctgaataaag tacaatgcct acaagggaga ttggtaaaca aaattttgga
     2701 ttatatcaaa aactattagg atgtttttca cattttataa ttttgttcaa gaattgaaat
     2761 tcccacattt tagtctcaaa tctaatacac atgagtctgc tattattttc accattctct
     2821 attatctatt gcaggtagtg atagtatttg agaataattt ctatactaga gcttaagtaa
     2881 ctgaattttt gttataaaat taggctgaga aacacatcca atttaactca atgtggattt
     2941 aatagtatta tttacattgt agacttttca ttgtggtata ggtgatttgt tagtttgaat
     3001 tcattatcac tgtagagaaa gattaattgc gagttgtaga tattatagtc taatcattgt
     3061 ccataatcca atatttcttc atcccattgg tggaagagat cataataatt tgtaactagt
     3121 aatttattat agtaattaag gaatctatga acagatatgt ttttctctta caatacccta
     3181 acgatatgaa agacaaggtg aatgaggaga aatatgaatg tacgagaata tctaatggat
     3241 tcttgtattc caataagact tgcgtgtata aatgttgacg gatggccaat aacagtatcc
     3301 ttgtggtatg tatatctaga agagaaaatc ttttgtgcta ctcaaagaaa tgccaaggtc
     3361 atagagtacc tgtctaaaaa tccaaaatgc ggctttgaag tggctggtga tctacctcca
     3421 tatcgtgggg taaggggatg gggatatgca aaattagaca aggtcagagg ggttgaaatc
     3481 ctctacatgc tcatcaaaaa atatttaaga gatgaaaaat cgtctttagc taattttttg
     3541 ttgggaagaa atgaaaatga aatggcgatc gaaatcacac cactatctat attttcttac
     3601 gactattctg accggatgaa agatattgtc gttaatagga agaaagtttg atatgtacca
     3661 gatttaacat cattatatac atattgatta aaaaatctta ttctagtcta ttggttataa
     3721 ttttgaatta ttaagataaa aactttataa ttacaaatca agtattcatg attattttaa
     3781 taaaaactaa tcaatgatga tgtgcatttt atagataaga atgaattata tgactacata
     3841 acttttaact atatcctctc cattatgtgt cttgttgtat ttagtcaacg
//
LOCUS       DATIAS010000428         2834 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1574553, whole genome shotgun sequence.
ACCESSION   DATIAS010000428 DATIAS010000000
VERSION     DATIAS010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1574553"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..1850
                     /locus_tag="VLA74_08645"
     CDS             96..1850
                     /locus_tag="VLA74_08645"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HSF50812.1"
                     /translation="MVNPLPNDRIPEPKNRRNAVADISLPNTTVMHDNNKEEMDYQAA
                     GHPKGIASFTKGLNHNSMGEVLNSADFDQFLNAIQDSLADVPNYSNSLSLFENLPIGS
                     GVVAGKPKAKLVNPVCGLSYDSEGLDAFNRIMLPAPRMDSLNGAAEIAELYWMYLMRD
                     INFTDYDEEDIAEDAITDLKNNFGAYNFTIETLNTSWTKTGIALSPKTLFRGINVGDN
                     VGPYISQFMLRGNIDKPIKRNEKHGHVKYGTTSIDQKHVVAKKELDFMTDNQSWLNVQ
                     NGLYTYADRVADNNNKYFDDEPRFIRNLRDLATYVHYDALYQAYLTACLYMLNDSGGE
                     NNSNRFSISEGIPYKTLQKQEGFGNYGGPHILSLLTEVATRALKAVWFQKWFVHRRLR
                     PEAFAGLIHHHIKSNKTKYPFIHQSILNSPVLEKVAKRNKELNKDLESDNPDKNKETY
                     SLGQAFPEGSPLHPSYGAGHATVAGACVTILKAWFADGDMPGPIVEANHNGKELKNYE
                     GNDKDQIKIHGELNKLAANVAIGRNGAGVHYRSDYTVSLILGEEVAISILKELKSYLP
                     EQTVFNFRRFFTDAPITI"
     gene            complement(2350..2553)
                     /locus_tag="VLA74_08650"
     CDS             complement(2350..2553)
                     /locus_tag="VLA74_08650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50813.1"
                     /translation="MKPLLFFIAMIIIIIVLSIFIDLAFAEKNVVDFIIEKPKWCNSA
                     SLSHYYTFMEIQKEYKYPCATYI"
BASE COUNT         1041 a          415 c          457 g          921 t
ORIGIN      
        1 ccttttctat cttgagcaat atatttaaat tctattctaa tatggctatc ctatgaataa
       61 tatacttatt caggatatta taggaggcaa aaataatggt aaatccttta ccaaatgata
      121 gaattcccga accaaaaaat agaagaaatg ctgtagctga tatatcttta ccaaatacta
      181 cagtaatgca tgataataat aaggaagaaa tggattatca ggctgccggt catccaaaag
      241 gaattgcaag ttttacaaaa ggtttgaatc ataacagtat gggtgaagtg ctaaattcgg
      301 cagattttga tcaatttcta aatgccatac aggatagctt ggccgatgtt ccaaattatt
      361 cgaatagttt atcattgttt gaaaatcttc ctattggaag tggagtagtt gctggcaaac
      421 cgaaagcaaa attggtaaat cctgtgtgtg gtttatctta tgattctgaa ggattggatg
      481 cttttaatcg tattatgctt cctgccccaa gaatggattc attaaatggg gctgctgaaa
      541 ttgctgagtt atactggatg tatctaatga gagatattaa tttcacagat tatgatgaag
      601 aagatatagc cgaagatgct ataacagact tgaaaaataa ctttggagca tataatttca
      661 caatagaaac actaaataca agttggacga aaacagggat tgcactctca ccaaaaacat
      721 tattcagggg aataaatgtc ggagataatg ttggtccgta catttctcaa tttatgttaa
      781 gaggaaatat agataagcct ataaaaagaa atgaaaaaca cggacacgta aaatatggta
      841 caacaagtat agatcaaaaa cacgtagttg ctaaaaaaga attagatttt atgacagata
      901 atcaaagttg gttgaatgtc caaaatggat tatatactta tgcagataga gtagcagata
      961 ataacaataa atattttgat gatgaaccgc gttttataag aaatttaaga gatttagcaa
     1021 catatgtaca ttacgatgcg ttatatcaag catatctaac agcatgtttg tatatgttaa
     1081 atgatagcgg cggtgagaat aattcaaata ggtttagcat aagtgagggt attccatata
     1141 aaactctgca aaaacaagag ggatttggaa attatggggg tccacatatt ctttccttgt
     1201 tgacagaagt ggccacaaga gcattaaaag cagtatggtt ccaaaaatgg tttgttcata
     1261 gacgtctcag accagaagcg tttgcaggct taattcatca tcacataaaa agtaacaaaa
     1321 cgaagtatcc atttattcat caatctattc ttaattctcc cgtattggaa aaagttgcaa
     1381 aacgaaacaa ggaattaaat aaagacttag aatctgataa tccagataaa aataaggaaa
     1441 catattcctt agggcaggct tttccagagg gttcgccttt acatccatca tatggagctg
     1501 gacatgcaac agtcgcaggg gcatgtgtta ctattcttaa agcatggttt gcagacggag
     1561 acatgcctgg acctatagtg gaggcaaatc acaatggcaa agagctaaaa aattatgagg
     1621 gaaatgataa agatcaaata aaaattcatg gtgaactaaa caaattagca gcaaatgtag
     1681 cgattggaag aaatggagct ggagtacatt atagaagtga ttatactgtc tccttaatac
     1741 ttggagaaga agttgccatc agcattctca aagaattaaa aagttattta ccagaacaaa
     1801 cagtatttaa ttttagaaga ttctttacag atgctcctat aacaatttaa caatgatgta
     1861 atttttattc caacaatttt atttttttaa atctattctg aaacatacat ctgaatatta
     1921 tctcctttta ctaagacatt agactcattt ttacaccatt atcggtatta ttctctcatt
     1981 caaatctcta acccactcac acacctccat acttctaaaa taagttttca tcaataaaat
     2041 ctaaatacat gtaaataatt aacttctcat cattttattt tcaaagaagt tattattttt
     2101 attgagtttt aataatatcc atgatactat aacattagac tcttattctt gtgcctgtat
     2161 catgattaat catgtaataa ccataatttt ctttaactca tattttattg ttgttgtaaa
     2221 aaatagaata ctaaaattat aatgatctaa tagttagtaa tctttattga aaaatctttt
     2281 caaacaattg cttcttgtgt atgtgaattc aaatgagtat tattggtaag tgcaaaaagt
     2341 tacataaact tatatgtacg tagcacatgg atatttgtat tctttttgga tttccataaa
     2401 tgtatagtaa tgacttagac tggcagagtt acaccatttt ggtttttcga taataaagtc
     2461 aacaacgttt ttttcagcga atgctaaatc tataaaaata gataatacta tgattataat
     2521 aatcattgct atgaaaaata atagtggttt cacttcaata ctgttaatct aacggttatt
     2581 ataaattttc aaattccttt tctaagcatg agatagctac aaataaatta atcctcttgt
     2641 gtttatttat tgattttaca atttatttta tattattaat gaaataccaa aaaactaaat
     2701 aaaatgtagt agaaccctac tacatggaag attctactcc cgacgggccc gtacttttct
     2761 cgggttcgct atatcaaata attatgaaag tattcacata agtcttatac aacatttaag
     2821 aaaaatctac atct
//
LOCUS       DATIAS010000429         2460 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1440969, whole genome shotgun sequence.
ACCESSION   DATIAS010000429 DATIAS010000000
VERSION     DATIAS010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440969"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1988
                     /gene="ligD"
                     /locus_tag="VLA74_08655"
     CDS             <1..1988
                     /gene="ligD"
                     /locus_tag="VLA74_08655"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HSF50814.1"
                     /translation="NKIKRILEFRSRNDQLLTHRYPELVDALISSSPSSMSQLSIKCE
                     TSVILDGEIVVLDNKTGLPSFQNHQKRMNVDYDREIGILSRQIPATYYFFDILYIDGK
                     NLQGLPFLERRLILSETIKENTRIKISDFIEELGREVFDKTKSMGLEGLIAKNKTGKY
                     VQGKRSRDWLKIKHIKTQDCVVIGYTKGEGNRKNYFGSLLLAVNDADGKLHFVGHTGS
                     GFDFQQLQHIYDKLQKIRIEKCPIEYIPYTNRNPYWIKPELVVEIKFSDWTHEKIMRS
                     PIFLRFREDKMPKECILEMEKYTNKVIETVEVESSTENKSNDCYNIQEGSNNHFDSFF
                     SNLDKIFWEKTTIHPQITKKDIIEYYEKISNHILPYLKDRPLSLNRYPDGIKGKSFYH
                     KNWNQNNKPTYVQTVKVYSESRKDNIINYIICNNKETLLWLANLGCIEMHPWYSRIKD
                     FDACKQRNDILSDEKCGLNFPDFIVFDLDPYIYSGKEIKGQQEPEYNFKAFQATVDVA
                     YKLKELFDELNMESYVKTSGKTGLHIFVPIVNLYTYDQTRSFAEVIGKILSNRYPEKI
                     TMKWDTTKRTGKVFFDYNQNTRGKTIASIFSLRPTELATVSIPVRWEDLTNVVPTDFT
                     ILNVPDIINNQIPNPWIDIMKNKQNLNELLENVKEIF"
BASE COUNT          961 a          338 c          370 g          791 t
ORIGIN      
        1 ttaacaagat aaaaaggata ctggaatttc gatctagaaa tgaccaatta cttactcata
       61 gatatccaga attagtagat gcattaattt cgtcatcacc atcatcaatg tctcagttgt
      121 ctataaaatg tgagacatca gtaattttgg atggtgaaat tgttgtatta gacaataaaa
      181 caggactgcc aagttttcaa aatcatcaga aaagaatgaa tgttgattat gatagagaaa
      241 ttggaattct atctaggcaa ataccagcaa cttattactt ttttgatatt ctttatatcg
      301 atggaaagaa tttacaaggt ttaccatttt tagagagacg attaattctt tccgaaacta
      361 tcaaagaaaa tacaagaata aaaatatctg attttattga agaattaggt agggaagttt
      421 ttgataaaac taagagtatg ggattagaag gattaatagc caaaaataaa actggaaaat
      481 atgtacaagg taaacgatct agggattggt taaaaataaa acatattaaa actcaagact
      541 gtgttgttat aggttatact aaaggagaag gaaatagaaa aaattatttt ggttctcttc
      601 ttcttgcagt taacgatgca gatggtaaat tacactttgt tggtcacact ggaagtggat
      661 ttgattttca gcaacttcaa catatttatg ataaacttca gaaaataaga atcgaaaaat
      721 gtccaattga atatattcca tatactaatc gaaatcctta ttggattaaa ccagaattag
      781 tagtagaaat aaaatttagt gattggactc atgaaaaaat tatgagatct cctatatttc
      841 ttcgatttag agaggataaa atgccaaaag aatgcatttt ggaaatggaa aaatatacta
      901 acaaggtaat agaaacagtc gaagtagaat catctacaga aaataagtct aatgattgtt
      961 ataatataca agaagggagc aataatcatt ttgattcttt cttctctaat cttgacaaaa
     1021 tattttggga aaaaacaact attcatcctc aaattacaaa aaaagacata attgagtatt
     1081 acgaaaaaat tagtaatcat attctacctt accttaaaga tagaccctta tcactaaata
     1141 gatatcctga tggaattaaa ggaaaatctt tctaccacaa aaattggaat caaaataata
     1201 aaccaacata tgtacagaca gtaaaagttt actcagaatc aagaaaagac aacattatca
     1261 actatattat atgcaataac aaagaaactc ttttgtggct tgcaaattta ggttgcatag
     1321 agatgcatcc atggtatagt agaattaagg attttgatgc atgtaaacaa agaaatgata
     1381 tcttatctga tgaaaaatgt ggtttaaatt ttcctgattt tatagttttt gacttagatc
     1441 catatatata ttcaggaaag gaaataaaag gtcaacaaga accagaatat aatttcaagg
     1501 cattccaagc aacagttgat gtagcttata aattaaaaga attatttgat gaactaaata
     1561 tggaatctta tgtaaaaaca tcaggaaaaa cgggattaca tatttttgtt cctattgtta
     1621 atttatatac ttatgatcaa actagatctt ttgcagaagt tataggtaaa attctgagta
     1681 atagatatcc agaaaaaatt actatgaaat gggatactac caaaagaaca ggtaaggtgt
     1741 tctttgatta caatcaaaat actagaggaa agacaatagc atcaattttt tcactgaggc
     1801 ctactgagtt agctactgtc tcgatccctg ttagatggga agatttaaca aatgtggttc
     1861 caacagattt tacaattctc aatgttcctg atataataaa caatcagata ccaaatccat
     1921 ggatagatat aatgaaaaat aaacaaaact taaatgaact cttggaaaat gttaaagaaa
     1981 ttttttgata taaaactaga ccattgtggg ctctgttaat ttaagatata ttcacctctt
     2041 tcattcaatt cgttaataaa ataattctca aatgttgtat cattatacat agtcacaaag
     2101 aattgtatcc agttatgtac atgtaacaga ttacattcat ctttttgtat acatgtggat
     2161 aataatcatc aaaactctct gtcctatcct taaagtattg cattaccctt tcaattagac
     2221 ttttctctaa tggagaatgt aaatagtgtt tcaatcccaa tacattacat gcttctggat
     2281 actatgttcc accatcatct gtatatacat gatgttttcc atatttttcg atcaatgatc
     2341 taataaaatg ctcagcaaca agcatatttc tctcttttga aatgtatatt ccaagcacaa
     2401 aactatgtat tggttcaatt gcaatccata accaaaagtg ttggttaccg atctgaataa
//
LOCUS       DATIAS010000430         2158 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_623092, whole genome shotgun sequence.
ACCESSION   DATIAS010000430 DATIAS010000000
VERSION     DATIAS010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623092"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(889..1992)
                     /gene="cax"
                     /locus_tag="VLA74_08660"
     CDS             complement(889..1992)
                     /gene="cax"
                     /locus_tag="VLA74_08660"
                     /inference="COORDINATES: protein motif:HMM:TIGR00378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HSF50815.1"
                     /translation="MIKFTKSSIFFFLLIFVPIAITLDLLHSNHIILFIIAVIALLPL
                     AKLIGDSTEHLSTHYGTTLGSLLNVTFGNAAEIIIAVVAINAGLLDLVKASITGAILG
                     NIMLIFGLSMIAGGIRRKEQLFSIQNAGLQSTMIFLAIIGLAIPTVLSSTVLKPVDIE
                     NQIKIEFLSDALAFLLLGVYIAGIIFTFVTHKYLFVSPQLEGENETYSDHKYPKHWSK
                     KKAFLMLAVSMIGVVAISEILVGSVEETSKEFGFGELFVGAIIVGIVGNAAEHSSAII
                     LARKGKIDLSIGIAAGSGTQIALFVVPILVIFGIMTNQPFTLEFTIYELVTLFLAAII
                     LNLIAHDGKSNWFEGVMLTAVYVIIAIGFYFIG"
BASE COUNT          806 a          349 c          274 g          729 t
ORIGIN      
        1 acaatccttt cgatacctgt aataatcaaa atgatagaca ggattgttat catgtatgcc
       61 aaagcaagag caggattcaa aatcacatat agagataatc caatagcaat aattccgagt
      121 ataatttgga caattcttaa ataagtatta ctcatattcg tcaactttaa gaaagcataa
      181 taaaatgctt tggttagtac gaattcaaaa attctttagt ttcgctatat tatgatttga
      241 ttctatacct tcttggatgt cacacttata taagaaatcc attttctcaa tttgttcccg
      301 caaaaaattt atatcatatt atcgattttg cacaggtgca acaaagggca tatatttata
      361 ataaaaaaaa cagtttcatt aaatggaatt tcttttcaca caatcgttat aaatatacaa
      421 tagaaacaac ctctttgaaa agtgacatac ttatacaacg aattaagtgt aataatattt
      481 atttctagta ttgtaaattt ataacatatt aattcgataa cacacatctt aaacttaaaa
      541 agtactggtt cttatcattc atcaaattca tcctaaatat actatctaac ataaattcac
      601 accatacata tgtatgttat aatcagaacc tgttaatttt cgatcgtctt tatgataata
      661 taaaataatt tgagtacgag attagccata tgatgaagat tttattccaa atccttagaa
      721 ggtttataga ataagaaaaa atattagacg aatttaggtt agacagtata tatttctctg
      781 ttatattgtc aacatattgg taatcaagta ataaaaataa atattttcaa tgaatgaaat
      841 ttatacacat caaatagtaa tagatattac aacaattttg aataataatt atcctatgaa
      901 gtagaatcca attgcaataa tgacatacac agcagttagc attacaccct caaaccaatt
      961 actttttcca tcatgtgcaa ttagattaag aataatggca gcaagaaata aagtgactag
     1021 ttcataaatc gtaaattcca gcgtaaaagg ttgattcgtc attattccaa atattaccaa
     1081 aataggtact acaaataaag ctatttgagt accagaacca gctgctattc ctatcgataa
     1141 atcaatcttt ccttttcttg caagaataat agcactacta tgttctgctg catttccaac
     1201 tattccaact atgatagccc ctacaaataa ttctccaaaa ccaaattctt tgctggtttc
     1261 ttctaccgat cccactaaaa tttcacttat cgcaaccacc cctatcatac ttaccgctaa
     1321 catcaaaaaa gcctttttct tactccagtg ttttggatac ttgtgatcac tataagtttc
     1381 attttcccct tccaactgag gtgatacaaa taaatattta tgggtaacaa atgtaaatat
     1441 tattcctgca atatagacac ctaatagcaa aaacgccaga gcatcactca aaaattcaat
     1501 tttaatttga ttctcaatat ccacaggttt cagtaccgtg ctggatagga cagtgggaat
     1561 agctaatcct attattgcca agaagatcat tgttgactga agtcctgcat tttgtatact
     1621 gaaaagttgt tcctttcttc taatacctcc agcaatcata ctcaaaccga aaattaacat
     1681 tatatttcca aggatcgcac cagttattga tgcctttact agatctaata aaccagcatt
     1741 aatagctact accgcaatta ttatttccgc agcatttcca aatgtaacat ttagtagaga
     1801 acctagagta gtaccgtaat gagtggaaag atgttcggta gaatctccta ttaactttgc
     1861 aagtggtaat aatgctatta ctgcaataat aaataagata atgtgatttg aatggagtaa
     1921 atctaatgta atggcaatgg ggacaaagat tagaagaaag aaaaatattg atgattttgt
     1981 aaattttatc attgtatttt tgatacaagt atactataat atttgaatgt ttattagatt
     2041 gtatgaattt ctgcaatatt attgattgtt atgtatttaa ttatctttac aaaaaagatt
     2101 tactaaaaaa attatattaa aaatttcaag atttaataag acttactcga aaatagat
//
LOCUS       DATIAS010000431         3817 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1575217, whole genome shotgun sequence.
ACCESSION   DATIAS010000431 DATIAS010000000
VERSION     DATIAS010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575217"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..477)
                     /locus_tag="VLA74_08665"
     CDS             complement(301..477)
                     /locus_tag="VLA74_08665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50816.1"
                     /translation="MFIGDGLTWNVFVRVIPNNGNGSTVTWTFIKPDNITDSQFEEQL
                     KGFDLEIESWSVVL"
     gene            complement(610..735)
                     /locus_tag="VLA74_08670"
     CDS             complement(610..735)
                     /locus_tag="VLA74_08670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50817.1"
                     /translation="MELLENNNGKLKKVIVKTMTVKRSVNEVFNFFNDPKNMELG"
     gene            811..1563
                     /locus_tag="VLA74_08675"
     CDS             811..1563
                     /locus_tag="VLA74_08675"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50818.1"
                     /translation="MSELNFIQNLTSLDLTDGEARVYIALLKLGSSKVGPLVRESRVS
                     YSKIYDVLERLALKGLVSYKIIEKIKYFQCIEPQRLYDYIEKKEKQLNLQKQKLDEII
                     PELSKFSSIDKRSSSEIFIGQKAIRTAYEILLNKSKEGEILRYFYPYDDYHEIASPFY
                     TRLYKFQKSKKIDERGISVTKFKNSKHYEQIPKDVNLRFVDFSLPGTLDIFHNKVLVI
                     DWKSITGILITSDEISDHFIRYFDSIWELTTE"
     gene            complement(1814..2359)
                     /locus_tag="VLA74_08680"
     CDS             complement(1814..2359)
                     /locus_tag="VLA74_08680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50819.1"
                     /translation="MKKIYKFWLHLSFINISAITVVLFMLPAITDTLAQLPKLNIKDQ
                     NTLSLNITDAVYNANKSEFLGSKNISSTPYRMTEQHYFDEGFLNNVGNVTNNQTFLNT
                     YLSDDLLLGRGNGTIETIDGQDISWISSDIGRLIDNQWIFYGLVLFNNTHIESLSVLN
                     NSIGLSKSTAGSEPDYIWLLK"
     gene            2507..3487
                     /locus_tag="VLA74_08685"
     CDS             2507..3487
                     /locus_tag="VLA74_08685"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSF50820.1"
                     /translation="MLKILSFLFGIITISIILFSTNSPSISIYAQDNQYYYNTNENNS
                     SLLNELESIKTILENKVTKLATALQIASSLPEILEPPNTSLIDSKINGIPEYADIEKR
                     KIAKILLDQFNEFSSIVFSLNNADVYFVEPFERQLNLTTNNLSFRDYYQVVEQTKKTY
                     LSDAIISKATGRNLAVIATPVMKENDMRGILYGGINFNNYDQFLQSLHLQNNTRLVLI
                     DKTGVKIGDSNENETSVSKESFEKKQFSNLTSFKLALEGKSGSIVEKFDGKESQITFL
                     PYDLFQNKRILLLIQSCNSNGENELNKCIENNKEINLFNEDVLAKLGSFF"
BASE COUNT         1432 a          555 c          511 g         1319 t
ORIGIN      
        1 gttaaggaaa aaagaaccag atatgaccaa gattcagcga cttatgcgta gatatgttaa
       61 agttgttgca actcaggcaa tacttcaatt tgtaataatc tttataatgg caaactttgc
      121 tactggatat tttttcaagt aataaaatta ctatccacct tctctttttt agcacaaatt
      181 ttaataacat tttcatttaa aatgatcaaa tagataaaat tatttttagt gattgatcag
      241 aactacaaaa ttgtatcaaa atcagttcat acacttctct ttgagtgcct acgtataagt
      301 ttataacaca acagaccaag attcaatttc aagatcaaaa ccttttagtt gttcttcaaa
      361 ttgtgagtca gtaatattat ctggttttat aaaagtccat gtaacagtag atccattacc
      421 attatttgga ataactctta caaacacatt ccacgtcaaa ccatctccta taaacacatg
      481 atcaagaatc ccatattctc taactgctat atgtttgatc tttgatctgc cagcaagact
      541 atgatcaaag atccaccatt tgatgttatt atctttgtta tcttttacta catcaataaa
      601 ttttaacgct catcccaatt ccatattttt tggatcgtta aagaaattaa aaacttcatt
      661 tacacttctt ttaacagtca ttgttttaac aatgactttt tttaattttc cattattgtt
      721 ttccaataat tccatgataa taatccaata tgtaaatact taagttctag tttcccctta
      781 aggggtaaac aattaggaaa agtaataaca atgagtgaat taaattttat tcaaaatctt
      841 actagtttag atttaacaga tggagaagca cgagtatata ttgcattatt aaaattaggc
      901 tcttctaagg taggaccctt agtaagagaa tcaagagtgt cttattccaa aatatatgac
      961 gtgctggaaa gacttgcatt aaaaggatta gtgagttaca aaattattga aaagataaaa
     1021 tactttcaat gtatagaacc tcaaagactt tatgattata tcgaaaaaaa ggaaaaacaa
     1081 cttaatttac aaaaacaaaa actagatgaa attattccgg aattatcaaa attttctagt
     1141 attgataaga gaagttcttc tgagattttt attggacaaa aagccattag aacagcatat
     1201 gagattctat tgaataaatc caaagaagga gaaattctta ggtattttta tccctatgat
     1261 gactatcatg aaattgcctc tccattttat acaagacttt ataaatttca aaaatcaaaa
     1321 aagatagatg aaagaggaat aagtgtcaca aagtttaaga attcaaaaca ctacgaacaa
     1381 ataccaaaag atgtaaacct gagatttgta gatttctctc tacctgggac attagatata
     1441 tttcataata aagtccttgt tattgattgg aagagcatta ctggaatttt aataacttca
     1501 gatgaaatat cagaccattt tattagatac tttgatagca tatgggaact gacaacagag
     1561 tagatatttt aattacaatg tttttctttc atttatcata aaccttattt attatgttac
     1621 cgaaccctgt tataatgaga aatcaaagcc ctcagaaccc cacataatat caatgacaat
     1681 atttggttta tatacttgac caatattgat atcatatata ataaattata aaagaatcta
     1741 taatacatct ttagaccgaa tttttagaga aatgattcag tagtccaaaa aagtattaaa
     1801 taaagttaac agcctatttc aaaagccaga tgtaatctgg ttcagagcca gccgtactct
     1861 tggatagacc gatgctatta tttagtacag ataatgattc gatatgagta ttattgaata
     1921 acactaatcc ataaaaaatc cattgattat caatcaatct tcctatgtcg gaagatatcc
     1981 aactgatatc ttgtccatca atagtctcaa tcgttccatt tcctctccca agaagcaaat
     2041 catcagataa gtaagtattc aaaaatgtct gattgttagt tacattccct acattattta
     2101 ggaacccttc atcaaaataa tgttgctctg tcattcgata aggagtcgat gatatatttt
     2161 tggaacctaa aaactcactc ttattagcat tataaaccgc atctgttatg tttaaagata
     2221 acgtattttg atctttaata ttcaacttag gtaactgtgc tagagtatct gtaatagcag
     2281 gaagcataaa tagaactacg gttatagcgg agatattgat aaaggacaaa tgtaaccaga
     2341 atttgtatat tttcttcatt atatttagtc aataaaataa tctagtagat aaagattatt
     2401 tgtttattta acattagatc tttataaaat agtataccat ctgctaaatt attaagttat
     2461 agatagaatt atattgaatt gttcttaaaa ttctcaagat tagataatgt taaagatttt
     2521 aagtttttta tttggtatta ttactatcag tattatttta ttttctacaa actcaccttc
     2581 tatctctatt tatgctcaag ataatcaata ctattataac acaaacgaaa ataattcttc
     2641 acttttaaat gaacttgaaa gtataaaaac aatactcgag aataaggtaa caaaacttgc
     2701 tacggcttta caaattgcta gtagtctacc agaaatttta gaaccaccta atacaagttt
     2761 gatagattcg aaaattaatg gtataccaga atatgcagat attgagaaga ggaaaatcgc
     2821 taaaatacta ttggatcaat ttaatgaatt ttcatcaatt gtattttcat taaataatgc
     2881 agatgtatat tttgttgaac cattcgaacg tcaattaaat ctgactacaa acaatctttc
     2941 atttcgagat tattatcaag tagtggaaca aactaaaaaa acttacttaa gcgatgcaat
     3001 tatctctaaa gcaacaggaa gaaatctagc agtaattgca actccagtaa tgaaagaaaa
     3061 tgatatgaga ggaatattgt atggtggtat taattttaac aattatgacc aattcctgca
     3121 gtcgcttcat ttacaaaata ataccagatt ggtattaatt gacaaaactg gagtaaagat
     3181 tggtgattct aatgaaaacg agacatcagt ctcaaaagaa tcttttgaga agaaacagtt
     3241 ttcaaatctt acctcattta agttagcatt ggaaggtaag tcaggtagta ttgtagaaaa
     3301 atttgacggg aaagaaagtc aaatcacttt tcttccatat gacctttttc aaaataaaag
     3361 aattttacta cttattcaaa gttgtaacag caatggagaa aatgaattaa ataaatgcat
     3421 agagaataat aaagaaatta acctatttaa tgaggatgtt ttggctaaac taggcagttt
     3481 tttttaaggt aactttttat tcttatatgt ctttttttat tactctatat taaactcctt
     3541 agtatcgcta ttagtattag ttaaaatata atgaatatgc ctcaaagtta aaaattattt
     3601 tttattatta tattctttta aattttagat actatcaatg gtaaatcttt aattttatct
     3661 taagaataat tttctggata aaccttagtt ttgaatacgt tgttgaacta caaaatcgtg
     3721 tcaaaaacag ttcacacacc tccgagcccg ctaaccaatt gggctcattt agatatgaag
     3781 tctatagatg caataaaaca ttattattaa ttactat
//
LOCUS       DATIAS010000432         3509 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1575476, whole genome shotgun sequence.
ACCESSION   DATIAS010000432 DATIAS010000000
VERSION     DATIAS010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3509
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575476"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VLA74_08690"
     CDS             <1..630
                     /locus_tag="VLA74_08690"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSF50821.1"
                     /translation="HKYAIAYLRVSTEEQTVQTQKVAITKWAKDHDYQVLYFFQDPAV
                     SGKVPATSRKGFQDLIEFVKSSKVEAVLVYELSRVGRTFWDTLDAIKVIEGYSPLISC
                     SPRESFLQTTEPSIRKLMISILTWVAEREREMLVQRTKDGMKRAKIAGKEIGRPQKVI
                     DKNSLIALLSENISRAKIARELGISKATLYKEFRRLNISHHDSKTIFPQ"
     gene            complement(614..2038)
                     /gene="bioA"
                     /locus_tag="VLA74_08695"
     CDS             complement(614..2038)
                     /gene="bioA"
                     /locus_tag="VLA74_08695"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: protein motif:HMM:TIGR00508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HSF50822.1"
                     /translation="MNKKKIYKKNPKLNKRDINKLLVFFDKKYIWHPYTQMQIWNKQD
                     NIVITHGDGFYLVAENGNKYLDGIANMWCNVWGYGPNPVIEAIRRQFYELPHSTLFGL
                     GNKPSIVFATKLLKLTKGMNKVFYSDNGSTAIEVALKMAVQYWKNKQFPKKNRFLSLE
                     NGYHGDTIATMSMGYVDRYFSPYKSLLIRTFRAPAPSSFENNIDNILTESEIVDICLE
                     KTERIFKKNSSQIAGLVMESGAQIAGGISIYPDSYQKRISGLCKKYDVLLILDEIATG
                     FGRLGNMIEYLPQSSKPDIVCYGKALNGGYFPIAVTLTTDKIYKEFLGQYYENKQLFH
                     GHTYTGHPAGSAACIANIEMYEKRNLIQKIRDNSNHIKNTLKKFEDCKFVHKIRHKGL
                     LVGIELARESETPTEKRKKQPLSYIDGFALNNYIMRESLKRGVFLRSLGNIVTLIPPL
                     AMPRNQLDILIDTTYDIIKSIEER"
     gene            complement(2118..2318)
                     /locus_tag="VLA74_08700"
     CDS             complement(2118..2318)
                     /locus_tag="VLA74_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50823.1"
                     /translation="MVKITFELEDKLNEKFRKVIVTKKGLYRGVIQESIIEAINDWIR
                     KKQDNKKKTAKKDESNTTINNR"
     gene            complement(2872..3153)
                     /locus_tag="VLA74_08705"
     CDS             complement(2872..3153)
                     /locus_tag="VLA74_08705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50824.1"
                     /translation="MKVFNLCLGFFLTAISLIFVTANTENGYSLSIHSPEESDIYLKL
                     SNLTKNTGNAIVESMRAIEAGDDKSALKILSNVTLNIEEIYNGLEILVK"
BASE COUNT         1198 a          537 c          517 g         1257 t
ORIGIN      
        1 cacaagtatg caatagcata tcttcgagta agtactgagg agcagacagt acagactcaa
       61 aaggtagcaa ttaccaaatg ggcaaaggat catgattacc aggtgttgta ctttttccaa
      121 gatccagcag taagtggcaa agtacctgct acatctcgaa aaggtttcca ggatctgata
      181 gaatttgtaa aatcatctaa agtggaagct gttttggttt atgagctctc gagagttgga
      241 agaacgtttt gggatacact agatgctata aaggttattg aaggatatag tccactgata
      301 tcatgttctc caagagaatc ttttttgcag acaacagaac caagtatcag aaaactgatg
      361 ataagtattc taacatgggt tgcagaaaga gaaagagaaa tgcttgttca acgtacaaaa
      421 gatggcatga agagagcaaa aattgctggg aaagaaatag gaaggcctca aaaggttatt
      481 gacaaaaata gcctaattgc attgttatct gaaaatattt ctagagcaaa aatcgcaagg
      541 gagttgggta tttcaaaggc taccctttac aaagaattta ggaggttgaa tatatctcat
      601 cacgattcta aaactatctt tcctcaatag actttattat atcataggta gtatcaatca
      661 aaatatctaa ttggttcctt ggcatagcaa gtggaggaat tagtgtgaca atgtttccaa
      721 gtgatctaag gaaaactcct cttttcagtg attctctcat tatatagtta ttaagcgcaa
      781 atccgtcaat ataggacaat ggttgttttt ttctcttttc tgttggtgtt tcactttctc
      841 gagctaattc tatccctact aaaagtcctt tatgtctaat tttatgaaca aatttacaat
      901 cttcaaattt cttcagtgta tttttaatat gattactatt gtctcttatc ttttggataa
      961 gatttctttt ttcatacatt tctatattag caatgcaagc tgcagatcca gcaggatgac
     1021 cggtatatgt atgtccatgg aataattgtt tattttcata atattgaccc aagaattctt
     1081 tataaatttt atctgtcgtc aacgttactg caataggaaa atatcctcca tttaatgcct
     1141 ttccataaca gacaatatct ggtttagagg attgtggcag atattctatc atgttgccca
     1201 atctgccaaa acctgtggca atttcatcca agataagtag aacatcatat ttcttacaca
     1261 aaccagagat tcttttttga tatgagtctg gataaataga tatcccacca gctatttgag
     1321 ccccactttc cattaccaat ccagctattt ggcttgaatt ttttttaaat atgcgctctg
     1381 ttttttctag acatatatca actatctctg actctgttag aatattgtct atattgtttt
     1441 caaatgatga aggtgcagga gctctaaatg ttctaattag taatgattta taaggactga
     1501 aatacctatc aacgtaaccc atggacatag tcgcaattgt atctccatga taaccattct
     1561 caagggaaag aaatctgttc ttttttggaa attgtttatt tttccaatat tgtacagcca
     1621 ttttcagtgc tacttctata gccgtcgaac cattatcaga ataaaacact ttgttcattc
     1681 ccttggtcaa ttttaaaagt ttagttgcaa atactattga aggtttattt cctaatccaa
     1741 atagagttga atgaggaagt tcgtaaaact gtctcctaat tgcttcaata acgggattcg
     1801 gaccataacc ccaaacatta caccacatat tcgcaattcc atcaagatac ttatttccat
     1861 tctcagcgac aagataaaat ccatctccat gagttattac tatattatct tgcttattcc
     1921 aaatttgcat ctgggtataa ggatgccaga tgtatttttt atcaaagaaa actaataatt
     1981 tgttaatatc tctcttattt aatttcggat tttttttgta aatttttttt ttattcatcg
     2041 ctcagaaatg ttttttgaga tacttaataa aattatacct gctgagcttt ctaaattcgg
     2101 gttttgaaac atttaaatca tctattgttt attgttgtgt tactttcatc cttttttgct
     2161 gtttttttct tgttatcttg tttcttcctt atccaatcat ttatcgcttc aatgattgac
     2221 tcctggatta ctccacggta taatcctttt tttgttacta ttacctttct aaatttttca
     2281 tttaatttat cttctagttc aaaagtaatt tttaccatct tcccttataa gcattttcac
     2341 gtatttatgg gttactgtct taccgtataa gcattatccc ataatcccat attctaaccg
     2401 agaattttca ataaaataat acaatttatt gaaattccta aatcacggtt aaaaaataag
     2461 atcctagcat aggaaaaaaa ttaatacaaa ccaatcatta aaaggataga aaaccgatag
     2521 aaattgagtt ttaggcagaa aagcaattaa aggtatttct tatgaaaaaa ttgtctatac
     2581 acaaaaaaag ggtattatat cataaaaaat attaatatcc atgtatgaat ccactattac
     2641 gattggatca ttaaagaatg aattagctgg ataatactgt ttgcaatatg tttaaaatat
     2701 tataactaat ggttctgata tatcaataat aattttgtaa aaaataatga gagtcaagta
     2761 tctatttcta aatatctgta aatctaaata attcaataaa attaaattag attaaagaga
     2821 ttggttagat atttggattt catgaaaatc gatagcgttt tttttgaaat attattttac
     2881 taatatctct aatccattat agatttcctc aatatttaga gttacattag ataaaatttt
     2941 tagagcactt ttatcatcac ctgcttcaat agctctcatg ctttctacaa tggcattacc
     3001 agtattttta gtcaaattcg ataattttag atatatatca gattcttcag gactatgaat
     3061 ggaaagagaa taaccatttt ccgtatttgc tgtcacaaat attaaagaaa ttgcagttaa
     3121 gaaaaatcct aagcataaat taaaaacctt catttatcta ctaagagttt tataattata
     3181 taattatatg tatttcaatt ttttagaaaa taaaataaat tcatagtcca ttacagaatg
     3241 aattaaataa atggatgatt atatcaaggg gaataaagta gtaagagtaa atgattttgt
     3301 taaagactga tactataaag gtttttttgg catagaaggt atttagaaac tattattact
     3361 aaaattaatg aactcattat cctttgaatt ctaaggttat agggattcaa attgaaatgg
     3421 cataatagaa tatgaatata gtagatcaag taaaaccctt taatacatta aatacagata
     3481 cgaatcttga tcagttgtat ataaaaaga
//
LOCUS       DATIAS010000433         2618 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1575621, whole genome shotgun sequence.
ACCESSION   DATIAS010000433 DATIAS010000000
VERSION     DATIAS010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575621"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VLA74_08710"
     CDS             complement(<1..229)
                     /locus_tag="VLA74_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50825.1"
                     /translation="MAYLGNSINIAGKNRFLTSNLMFQISEYLLEGNTKNSSKINSAI
                     NQLESNILALRQGGNIIAGIDLKPLPREFLDD"
     gene            complement(523..2400)
                     /locus_tag="VLA74_08715"
     CDS             complement(523..2400)
                     /locus_tag="VLA74_08715"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF50826.1"
                     /translation="MLNAFNSLIHDIDTNLLFGKSLLEFLNEYFPTERKNKNNKQKLL
                     IFDQLEELFTFYPNDNWREQQEDFFEQIAEALENDPSLRIVFVIREDYLAELDPFVDI
                     LPERLRSRFRLERLSKEAAYLAIKKPLEKIKTNVDKRLVQNFFNNEMIEKIIDELTKI
                     KKEQFGGSFCSLKGEFIESIHLQVVCQRLWQKLQSTKITEFNNQNYFDSLIKFDKILE
                     DFYDEVIDEAAVHGKINQDTLRNWIETSLITSSGIRGKAYRDSKTSDGISNEAIQILI
                     QKHLIHSQNCIGGHWYELIHDQFIEPIKSSNAKRKVHDSLKLINKRQIEKISRLGIGK
                     IININIDSKQEKKFPKEIKEDIESLSEVEEKLSNIREIKLQQPQSFDIEESLKYANFL
                     FYSGKYEQAIPYLNRVIEIDSSNVDAWSNKGLISIDLKKYDEAIKYYDKALEIDSTYI
                     DAWKGKGNVFLHLKKYHDSLQYFTKAHEFNPEEIVNKINYAQSLLLTNNYEKSVKILK
                     ELYDQFDIYSDYGFILRYLTLCSLFSRNLNNEAITLSLELIEYFQNRNIKDKISWSFS
                     SLRNMLKESSNLNSYTKKLLLSFIYIYETKTKRECTEYIIRIKNLINNNLVNKEKIKN
                     K"
BASE COUNT          871 a          397 c          319 g         1031 t
ORIGIN      
        1 aatcatctaa aaattctctt ggtaatggtt ttaaatctat tccggctatg atatttccac
       61 cctgtcttaa tgccaagata tttgattcca attgatttat tgcagagttg attttagaac
      121 tatttttagt gttaccttca agcaaatatt ctgatatttg aaacatcaga ttagaggtga
      181 gaaatcgatt cttccccgca atatttattg aatttcccaa atatgccatt tgtgattgat
      241 aataagagaa tataacaaaa ttagtaataa caagaataat cagaataaaa acaaatatta
      301 ctattttaga acctatttta gaatgaataa aagtgtcagc ataatacttt aacacaaata
      361 catatagaaa ataaagtata aatagaaaat aaaaaattat tcatagatga aaattaatga
      421 aaaatctaaa tgtggactaa tctaattaat tagttttgtc tataatgtca atttggaaag
      481 aaaaaaattt ccttctccat aattttgcaa tattttattt ctttatttat ttttaatttt
      541 ctctttatta actaaattgt tgttgatcaa attcttaatc cgaattatgt attctgtaca
      601 ttctctcttt gtttttgtct catagatata tataaaggaa agaagtaatt tctttgtata
      661 tgaattaagg ttgctactct ctttcagcat atttcttaaa gaagagaaag accaacttat
      721 tttatcttta atatttctat tctgaaaata ttctattagt tctaatgata aagtgattgc
      781 ttcattgttg agattacgcg aaaagagaga acataaggtt aaataacgta agataaatcc
      841 ataatcagaa tatatatcaa attgatcata taattccttc aatattttta cacttttctc
      901 ataattattt gttaatagaa gtgattgagc ataatttatc ttgtttacta tttcttctgg
      961 attaaactca tgagctttag taaaatattg taaagaatca tgatactttt tcaaatggag
     1021 aaagacatta cccttccctt tccatgcatc aatatacgta gaatctatct ctaaagcttt
     1081 atcatagtat ttaattgctt cgtcatattt ttttaaatct atagaaatta gacctttgtt
     1141 agaccacgca tctacattac ttgaatctat ctctataacc ctatttagat atggtatagc
     1201 ttgttcatac ttgccactat agaaaaggaa atttgcatat tttaaagatt cttcaatatc
     1261 aaaagattga ggttgttgta attttatttc tctaatgttg cttagtttct cttctacttc
     1321 acttagactt tcaatatctt cctttatctc ttttggaaat tttttttctt gcttagaatc
     1381 tatattaata ttaattatct ttccaatacc cagacgactt attttttcta tttgcctctt
     1441 attaataagc ttcaagctat catggacctt tctttttgca tttgaagatt taataggttc
     1501 aataaattga tcatgtatca actcatacca atgtccacct atgcaatttt gtgagtgtat
     1561 tagatgtttc tgaatcagta tttgaattgc ttcattagat attccatctg atgttttcga
     1621 atctcggtaa gccttgcctc ggattccaga agaggtaatt aatgaggttt ctatccaatt
     1681 tctaagtgtg tcttggttga ttttaccatg tactgctgcc tcatcaataa cttcatcata
     1741 aaaatcttct aatatcttat cgaacttaat taaagaatca aaataatttt gattattaaa
     1801 ttctgttatc ttagttgatt gtaacttttg ccataatctt tgacatacaa cttgcaagtg
     1861 aattgactct atgaattctc ctttcaagct acaaaacgaa cctccaaatt gctctttttt
     1921 tattttagtt agttcgtcaa ttatcttctc tatcatctca ttattaaaaa aattctgtac
     1981 taatctctta tcaacattag tctttatttt ttctaagggt ttctttatag ctaaataagc
     2041 tgcctctttg gacaaacgct ctaatctaaa tcgagatctc aatcgttctg gtagaatatc
     2101 tacaaatgga tcaagttctg ccaagtaatc ttctcttatt acaaagacaa ttctaagaga
     2161 cggatcattc tctaaagctt ctgcgatttg ctcgaagaaa tcttcttgtt gttctcgcca
     2221 gttatcattt ggataaaaag taaataattc ttctaattgg tcaaatataa ggagtttttg
     2281 tttattattt ttattcttcc tctcagttgg aaaatattca ttcaaaaatt ctaaaagaga
     2341 tttgccaaat aacaaattag tatcaatatc atggattaaa ctgttaaaag cattgagcat
     2401 atatgtattt actactcgtg aaacaaagtc gttagtatta aaatctgatg tcgaatagga
     2461 agcaatatta actcagctcg gctctgttaa tttaagatat attcacctcc tctaactcaa
     2521 aataattatt attatttgct attgtatcat tatacataga tacaaaaaat tgtatccaat
     2581 tttgtacatg taatagattg cattcatctt tttgcata
//
LOCUS       DATIAS010000434         7954 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1576013, whole genome shotgun sequence.
ACCESSION   DATIAS010000434 DATIAS010000000
VERSION     DATIAS010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7954
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576013"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(293..493)
                     /locus_tag="VLA74_08720"
     CDS             complement(293..493)
                     /locus_tag="VLA74_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50827.1"
                     /translation="MTNDNRISLIKISRGLKDALNNAGFTIESILDNEPSKIAQDLGI
                     DEYVGKIIFTETKKKFASIIHV"
     gene            635..1036
                     /locus_tag="VLA74_08725"
     CDS             635..1036
                     /locus_tag="VLA74_08725"
                     /inference="COORDINATES: protein motif:HMM:NF016050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclophilin-like family protein"
                     /protein_id="HSF50828.1"
                     /translation="MNDILDVYFDDLDKKIYIRLDCSWSPETVKKIVMNLPIKTYMNQ
                     WGEEIYSDDTKIDVKYENPKKEVEIFDVAFWPEGKAICLFFGPTPISKSDKILPYSPV
                     NVIGRVINPDQNIIEVLKHKNRTRVTISKSS"
     gene            1081..1797
                     /locus_tag="VLA74_08730"
     CDS             1081..1797
                     /locus_tag="VLA74_08730"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HSF50829.1"
                     /translation="MIQAIIKYSRIEFKMLLHLKGIIFDMDGVLVDSMPSHSRAWQLA
                     FENVTNIQVESKLIYKNEGRRGMELVREILATKNIYVADISIIEKIVRKKSEIFKDIG
                     SFKLFPGVKKLISSLPCRKAVVSGSTKSDVFNIINHSFGNKIFDVLVTADDIANGKPN
                     PMPFIKALQELDLEAENALVVENAPLGVLASINAGIECIVTLNNTPLSYDDFKPMISN
                     HRIFSNLKSANKILINWCVK"
     gene            complement(1899..3041)
                     /locus_tag="VLA74_08735"
     CDS             complement(1899..3041)
                     /locus_tag="VLA74_08735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50830.1"
                     /translation="MNVRSAKSVFLSHSRFEISLFILIVSSIGSLVQISGGSWDVTSH
                     ILQEPESFFTPSHTMLYTGVGLISLSALLGCILMRSHEIKNTPVAGAFKLLVIGSLLA
                     VIAGPFDFLWHNTFGFDGLLSPSHVTLVTGMLVNSVAIFMGLYRLMSYIPKRKRLIQF
                     FLIPSLTSLWYTSIWYTFMFVLPFSDSDFFNFNLDSYSATIIASISLPLINSIIFLSS
                     SRALNNGFGSGFVIASLLLLINIFANIIPAKGLLSPVLPWYIVTILSASLLSDIILNS
                     NLFKNELKFKYNKLAVGGIMGSVFYFFNYPMITWTYGNVLNANLDSINGVLPTFLNTL
                     VPLSFFTIAIGAVMGVIGSLIFSKIEPRWFDPKFQGKKVSFAENTG"
     gene            3380..4492
                     /locus_tag="VLA74_08740"
     CDS             3380..4492
                     /locus_tag="VLA74_08740"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSF50831.1"
                     /translation="MEKMINHAITFVVMSIFFVTYTLESVNGQSSNFTEKEYLTLNDL
                     FDLVENSVVQITKTIPSVDPFGPKNENSTSLGSGFIYSKDGHIVTNNHVVEHAKSVDV
                     TFINGDRYTANVTGTDVFSDLAVIKINENVTKLPLVLILGNSSQLKVGDQVVAIGNPF
                     GLEGSMTTGIVSQIGRLLSVDDKGFSIPNAIQTDASINPGNSGGPLLDMKAEVIGVNT
                     AGIFPGGIGLAVPSNTVARIIPVLIEQGNYTHPWLGITGTTLTSELAKREHLDRSQKG
                     VILDTIVKASPADLAGLNGSVVNQYGEKRGGDLITAIDGKPILKIEDLISYLEINKAV
                     NENATLSIYRDGEILEKEIMLKSRPVSMQPINQTKS"
     gene            4667..5863
                     /locus_tag="VLA74_08745"
     CDS             4667..5863
                     /locus_tag="VLA74_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSF50832.1"
                     /translation="MKLSKSLIFLFSLAFIFIAYTGIKLVNPNISSHSQEEKIQRIIG
                     GHTPGYSTSTTNGELIDPISQMIPIKDAVIDPDKYLRDFNYGRVSVSDNGTTIRDFTI
                     VASDQEIKEISPGVFYNVWTFNGTVPGPTIRAVEGDIVRINFINNGSKFHTMHFHGIH
                     KAEMDGVFEGVAPGGKFTYEFIAEPFGLFPYHCHIQPLEEHIVHGLYGVYIVDPKIPR
                     PEADEMVMVMNGYDTDFDTENNFYTVNGIPYYYMHHPIQIKQNDLVRIYLVNMLEFDP
                     INNFHLHANLYNVYKTGTKTTPDEYTDMITMSQGERSILEFKYTYPGKYMFHAHKTEF
                     AEKGWMGLFLVKESVDEKNNTSYTNTADTLSDENDENLSTGSYNKITQKESAAKTLKN
                     LTKGGN"
     gene            5869..7179
                     /locus_tag="VLA74_08750"
     CDS             5869..7179
                     /locus_tag="VLA74_08750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation transporter"
                     /protein_id="HSF50833.1"
                     /translation="MKDMENKQAKKESKNNIEFSKKKLVLYGIIPFIILATLIAFLLS
                     PYGEVFLNAGIALPNLTIEKIEFQEDFIIAHVRNTGQFDTVISQADINDRIHPAGVEP
                     SKHLLRFESAKITIPFSWNVGEPYEIGITTSDGTRFSKIIEAAAPTPNPNYEQFAIFA
                     LIGTYVGIIPILIGLLWYPFIKKLNQNKYNFFLSLTVGLLVFLGLDALLESNEIVVSN
                     VSKIFNGQMLIIIGCIITFLVLIYISNRFTQRTQKNKSLIEGKNTDYNESVSSFSSMS
                     TRQEQKDIIKPIALSLMIAVSIGLHNFGEGLAIGSAILIGEVALSTFLIIGFTIHNTT
                     EGLAIVAPLTKSGKITIRKLIMLGVIAGGPTIIGAWIGGFLYHPIASVIFLAIGAGAI
                     FQVAYQVYSWFSSYLGNKNTLTNGYIISGFIVGIMIMYLTGLFI"
     gene            7209..7706
                     /gene="mntR"
                     /locus_tag="VLA74_08755"
     CDS             7209..7706
                     /gene="mntR"
                     /locus_tag="VLA74_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MntR"
                     /protein_id="HSF50834.1"
                     /translation="MNIINTKGLSSSSKSIKESTRLTSIRNANSSKKYTKDRTPRMED
                     YLEVIYELVQSKGYATTVDVSQYLNVSSPSVTKMVQRLDEAEMLIYEKYRGIRLTEHG
                     ISIAVSIRNRHGLLSEFFRLIGVDENTANEDAEGLEHHLHPESIKKLEKLVNIMKNNP
                     DILDI"
BASE COUNT         2980 a         1175 c         1365 g         2434 t
ORIGIN      
        1 agaaaacatg agaatactaa tttatgagat atcaaaagag aattggggca acggtggaat
       61 cctaggatct gacttgtaac tttaaatcga aaagatctct tgaaattttc ttattttatg
      121 cctaaattac atatacgaaa attgaggaca tagtatagtc ttatagagaa aattatacca
      181 accaaaaatt tttcatatac atctactgat aataatattt aatatgattt acttatttat
      241 aaaattcaaa tgtttgtctt tactcatacc gataatcata aaaatcaatt aactacacat
      301 gtataatact tgcgaatttc ttttttgtct cggtaaaaat aatctttccg acatattcat
      361 ctattcctag atcttgtgct atctttgagg gttcgttatc taatatggat tcaatggtga
      421 atcctgcatt atttaacgca tcttttaggc cacgagatat ttttatgaga ctgattctgt
      481 tgtcgttagt cattacctgt atatgaccat cgtagaacaa aaatttattc tatatactat
      541 atttagaata cttagatcta tatatcatga attataacac ttaaaacaat agcataaaac
      601 atatgatggt tatcatttaa gattaaaatg caatttgaac gatatattag atgtatattt
      661 tgacgattta gataagaaaa tctatatacg tttagattgt tcatggtctc cagaaactgt
      721 aaagaaaatt gtcatgaatt tacctattaa aacgtacatg aaccaatggg gagaggaaat
      781 ctatagcgac gatacaaaaa tcgatgtcaa atacgaaaat cccaaaaaag aagtagaaat
      841 tttcgatgtc gctttctggc ctgaaggaaa agcaatttgc ttattttttg gtccaacgcc
      901 aataagcaaa agcgacaaga tattacctta ttcaccggta aatgttattg gaagagtaat
      961 taatcccgat caaaatatta tagaagtttt aaaacataaa aatagaacac gtgtgactat
     1021 tagcaaaagt tcataataag atgatatttc attaccattt ccaaccaatt tttagaagag
     1081 atgattcaag caataataaa atacagtaga attgagttta agatgttgtt acatttgaaa
     1141 ggaataattt ttgatatgga tggggtattg gttgattcta tgccatctca ttcccgggca
     1201 tggcaattgg cttttgaaaa tgtaacaaat attcaagttg aaagtaaact catctacaaa
     1261 aatgagggaa gaaggggaat ggaattagta agagagatac ttgctactaa aaatatttat
     1321 gttgcagata tatccatcat agagaaaata gttaggaaaa agagtgagat ttttaaggat
     1381 ataggtagtt tcaagttatt tccaggtgtt aagaagctaa tatccagttt accttgtaga
     1441 aaggcagtag ttagcgggtc tacaaagtct gacgttttta atatcataaa tcatagcttt
     1501 ggaaataaga tatttgacgt cttggtgacc gcagatgata ttgccaatgg aaaaccaaat
     1561 cccatgccgt ttatcaaagc tttacaagaa ctagatttag aagctgaaaa tgctcttgta
     1621 gttgaaaatg caccattagg ggtactggct tcaataaatg caggaataga atgtattgtg
     1681 acactaaata atactccttt atcttatgat gattttaaac ctatgatttc aaatcaccga
     1741 atatttagta atttgaaatc tgcaaataaa atattgatta attggtgtgt taaataataa
     1801 tagggaggat caaatctgta atcaagaata gtataaaatt atttatcaga actaaaaaga
     1861 aaacaaatta aggtaaaaca tatttgaaga ataatggatc aacctgtatt ttctgcaaaa
     1921 gatacttttt taccttgaaa ttttggatca aaccagcgag gttcaatctt tgagaagatt
     1981 agagagccta tcacacccat gacagcacct atagctatcg taaaaaaaga tagtggtaca
     2041 agggtattga gaaaggttgg taatactcca ttaattgaat ctaaattggc atttaataca
     2101 tttccatagg tccatgtaat cataggataa ttgaaaaaat aaaaaaccga acccattatt
     2161 cctcccaccg ccagtttatt atacttaaat tttaattcat ttttgaacaa attagaattt
     2221 aatataatat ccgaaagaag agatgcactt aatatagtaa caatgtacca cggcaaaaca
     2281 ggcgacaata gacccttagc agggattatg tttgcaaaaa tattaataag aagcaacagt
     2341 gaagcaatga caaatccact gccaaaacca ttatttaatg ctctagagga acttaaaaat
     2401 attatagaat tgattaatgg aagggatatg ctagcaatta ttgttgcact ataagaatcg
     2461 agattaaagt taaaaaaatc ggaatcagaa aatggtaata caaacatgaa agtataccat
     2521 atagatgtat accacaatga tgtaagcgaa ggaattagaa agaattgtat caaacgcttt
     2581 cttttcggga tataactcat taatctatat aatcccatga atattgcaac ggaatttact
     2641 aacattcccg taaccaaagt aacatgtgat ggactcaaaa gaccatcgaa gccaaaggtg
     2701 ttatgccata gaaaatcaaa agggcctgca attacagcca acaaagatcc tattaccaaa
     2761 agcttgaatg ctcctgcaac tggtgtattt tttatttcat ggcttctcat taatatacaa
     2821 cccaatagag cagaaagtga gattagacca acgccagtat atagcatagt atgagatggt
     2881 gtaaagaatg attctggttc ttgtagaata tgggatgtca catcccaact acctccacta
     2941 atttgtacaa gagaaccgat tgaagataca attagaataa aaagagatat ttcaaaacga
     3001 gaatgcgaca gaaaaacaga ttttgcactt ctaacattca taacaaatct aatttgatag
     3061 aactaataag gataactaaa agactatgac gagatttttt ttatatggat ggatactttt
     3121 aatatttaaa atgacaataa caaactctaa tagtaaaaga aaagctaaca gtcaattaaa
     3181 aatataccaa aatttctctc ctagttgttg gaccgtaaaa atttgtgtca tatttttgat
     3241 atgccaaata acaaaaagca tgttttatga aagataacct gtcgacagat ctctgtccaa
     3301 atatataatt tataggataa taccagaaat ttgattataa aagaaacata tagaaacagc
     3361 aataataatt atttcatgga tggaaaaaat gatcaatcat gctattactt ttgttgtgat
     3421 gtcaatattt tttgttacat acactttgga atctgttaat ggtcaaagct ccaattttac
     3481 agaaaaagag tatttaaccc ttaatgactt gtttgaccta gttgaaaatt ccgttgtaca
     3541 gataactaaa acaatacctt ctgtagatcc atttggtcca aagaacgaga acagtacttc
     3601 tctaggatca ggattcattt acagcaagga tggacatata gttacaaata atcacgtagt
     3661 agaacatgcg aaatctgtag atgtaacttt cattaacggt gatagatata ctgccaatgt
     3721 aactgggacg gatgttttta gcgatttagc tgtaatcaag attaatgaaa atgttacaaa
     3781 attacccttg gtactaattc ttggaaattc atctcagctt aaggtcggag atcaagtagt
     3841 tgcaatagga aatccatttg gattagaagg atcgatgaca acaggtatcg taagtcaaat
     3901 aggcaggctt ttgtctgttg atgacaaagg attttcaatt ccaaatgcaa ttcagactga
     3961 tgcatctatt aatccaggca actctggagg gccattatta gatatgaaag ctgaggtaat
     4021 aggagtaaat actgctggaa tttttccagg aggaattgga cttgcggttc cttccaatac
     4081 tgtagcgcgc ataattccag tacttattga acagggaaat tatacccatc catggcttgg
     4141 aataacagga acaacactta catcagagct cgccaagaga gaacacttgg atagaagtca
     4201 aaaaggtgtt atacttgaca ctatagtaaa ggcaagtcct gctgatttgg ccggattaaa
     4261 cggaagtgtg gtgaatcaat atggtgaaaa gagaggagga gatctgatta ctgctataga
     4321 tggaaagccg atattaaaaa ttgaagactt gatttcttac ttggagatca ataaagctgt
     4381 aaacgagaat gcgaccttat ctatatatag agatggagag attttggaga aagagattat
     4441 gttgaagagt agaccagtat ctatgcaacc tatcaatcaa acgaagagtt agaaaaccgt
     4501 taatttccta tatttatttt atattgaact tctaattttt tcgtttatta actatcaagt
     4561 attataatta ttatattaaa atttatattc atataaatat aattccattc attatatttg
     4621 ttagccgagg ctaacattta tttatgtatg aaagctatat atttctatga aattatctaa
     4681 atcccttatc tttcttttct ctttagcatt catttttata gcatataccg gtatcaaatt
     4741 agtcaatcca aatatatcat ctcactctca agaagaaaag atacaaagaa ttattggagg
     4801 tcacacccct ggatatagca cttcaacaac aaatggggaa cttattgatc caatttctca
     4861 aatgataccc atcaaagatg cagtaataga tcctgataaa tacttgagag attttaatta
     4921 tggaagagta tcagtctcag ataatggcac gacaataaga gattttacaa ttgtggcttc
     4981 tgatcaagaa ataaaggaaa tttctccagg tgtattttat aatgtttgga catttaatgg
     5041 aacagtacct ggaccaacaa tccgtgctgt tgaaggagat attgtgagga tcaatttcat
     5101 aaacaatgga tcaaaatttc atacaatgca ttttcatggt attcataagg cagaaatgga
     5161 tggagtattt gaaggggtag ctccgggagg aaaatttact tatgaattta tagccgagcc
     5221 attcggactc tttccatacc actgtcatat ccaaccactg gaagaacaca tagttcatgg
     5281 tttgtatgga gtttacatag ttgatcccaa aattcctaga cctgaagctg atgagatggt
     5341 catggtaatg aatggttatg ataccgattt tgatactgaa aataacttct atactgtaaa
     5401 tggcattcca tattattaca tgcatcatcc tattcagatt aagcaaaatg atctagttag
     5461 aatctatcta gtaaatatgt tggaatttga tcctatcaat aattttcatt tacatgcaaa
     5521 tctctataat gtatacaaga ccggaacaaa aacaactcca gacgaatata cagatatgat
     5581 aaccatgagt cagggagaaa gaagtatttt agaattcaaa tacacgtatc ccggaaaata
     5641 tatgtttcat gctcacaaga cggaatttgc tgagaaggga tggatgggtt tatttctcgt
     5701 aaaagaatca gttgatgaaa aaaataatac aagctacaca aatactgcgg atactctgtc
     5761 tgacgaaaat gacgagaact taagtacagg aagctataat aagataacac aaaaagaatc
     5821 agcagcaaag accctgaaaa atttaaccaa gggaggcaac taaaaagaat gaaagacatg
     5881 gagaacaaac aagcaaaaaa ggaaagtaaa aacaatatag aattctctaa aaaaaagcta
     5941 gttctctatg gtataattcc ttttatcata ttagctactc taattgcttt tctcttaagt
     6001 ccatatggtg aagtctttct gaatgcagga atagcactac caaatcttac aatagagaaa
     6061 atagaatttc aagaagattt tataattgca catgtcagaa acacaggaca gttcgatacg
     6121 gttatttcgc aggccgatat aaatgataga attcatcctg cgggtgtaga accatctaaa
     6181 caccttttaa gatttgaatc agcaaaaata accattccat tttcttggaa tgtaggcgaa
     6241 ccctatgaga taggaattac aacaagtgat ggtacaagat ttagcaaaat cattgaagct
     6301 gctgccccaa ctccaaatcc aaattatgaa caattcgcca tatttgctct cataggtaca
     6361 tatgttggaa tcataccaat actgataggt ttattgtggt atccttttat aaaaaagtta
     6421 aatcagaata agtataattt ctttctaagt cttactgtag gattactagt ctttcttgga
     6481 ttagatgcct tgttagaaag taacgagatt gtagtctcaa atgtttctaa aatctttaat
     6541 ggacaaatgc ttatcataat aggatgtatt atcacttttc tggtactaat ttacatttca
     6601 aatagattta cacaaagaac tcaaaagaat aaatcgttaa ttgaaggtaa gaatacagac
     6661 tacaacgaat ctgtgtcatc attttcttcc atgtccacca ggcaagaaca aaaagacatc
     6721 atcaaaccaa ttgcattgtc tttgatgata gctgtaagca taggattgca taactttgga
     6781 gaaggattgg ctattggttc tgcaattttg attggtgagg ttgcactgag tacttttctt
     6841 ataataggtt ttaccattca taacacaaca gagggtttag caatagtagc accattgact
     6901 aaaagcggaa agataacgat acgaaaatta ataatgcttg gagtaatagc aggtggacca
     6961 acaataatag gagcttggat aggaggtttc ctttatcatc ccatagcctc tgtgatcttc
     7021 ttggctatag gagcaggtgc aatctttcag gtagcatatc aagtatattc atggttttca
     7081 tcctatctag ggaataaaaa tactttaaca aatggatata ttatcagcgg atttattgta
     7141 ggaataatga ttatgtatct aacaggatta tttatataaa aaaaggagat gaaagaggta
     7201 atccgaaatt gaatataatc aatacaaaag gtctatcgag tagcagcaaa agtatcaaag
     7261 aaagtactag attgacttcc atacgtaatg ctaattcctc caagaaatat acaaaagata
     7321 gaactccaag gatggaggat taccttgaag ttatttatga attagtccaa agcaaaggat
     7381 atgcaacaac cgtagacgta tctcaatatc tgaatgtaag ctctccaagt gtcacaaaaa
     7441 tggtacaaag attggatgaa gcagagatgc ttatttatga aaaatataga ggaataagat
     7501 tgactgaaca tggaatttct atagctgtta gtattagaaa tagacatggg cttttatcag
     7561 aatttttcag attaatcggg gttgatgaaa atactgcaaa tgaagatgca gaaggtctcg
     7621 aacaccattt acatccagaa agtataaaga agttagagaa attggtaaat attatgaaaa
     7681 acaacccaga tatcctagat atttgaattg ctttttaaat taaaaaaaca aatatcgaat
     7741 taaccgaatt tattgcgatt tatggttaca aaacaaaatt acaaagaaca taattcctgg
     7801 tatcagaaaa aataatttat aaaaaagctg aaaataaaaa tggttaattg gttaaattgt
     7861 caatttattt ttttcttgct tttttcaatc atatcacgaa aatttacata aactaatttg
     7921 catagactcg atagctcctc gatttgggat atat
//
LOCUS       DATIAS010000435         6224 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1304381, whole genome shotgun sequence.
ACCESSION   DATIAS010000435 DATIAS010000000
VERSION     DATIAS010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6224
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304381"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..388)
                     /locus_tag="VLA74_08760"
     CDS             complement(56..388)
                     /locus_tag="VLA74_08760"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSF50835.1"
                     /translation="MEYAYPNVLVSTQWINDHLNDPKVRIVEVDYIPATSYMLGHIPG
                     AVLFDWKRDIIDSTKRDVISKQVLEDSLQRIGVNNDTTLIVYGDFRIGLQPLLSGFSN
                     IMDLKMLG"
     gene            627..1505
                     /locus_tag="VLA74_08765"
     CDS             627..1505
                     /locus_tag="VLA74_08765"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF50836.1"
                     /translation="MKSDNSFFKEKELDFVDLSSTNSNENRSFVKDKLNCQDKYMSDQ
                     DKKLLDDNNSFPQITDIQTYIEETETRILEAFEKGSRLYPKIERSEQFLQQHIGSKLK
                     LVVLYVDLVDSTLMTRDFSVDKLATIIQMFTQEMSIAASNFNGQILKYVGDAVIAYFP
                     IEVNDSVSCSSAINCAFHMITIIEQAINPILRRNNYDHLQVKIGIDASEHSIIQYVLG
                     EKSYTDILGYGISMAAKLTKLAKPNQIITSHGIYICMHSSLRKRFSELEIAPRIWKYI
                     DEKLQPGVWKSFDKMQ"
     gene            complement(1535..1936)
                     /locus_tag="VLA74_08770"
     CDS             complement(1535..1936)
                     /locus_tag="VLA74_08770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50837.1"
                     /translation="MQFFLLCPIRISYSLIISGFKDSVDDFINQYDIRNILSVQKVSD
                     NSTFDKFIIKATLTKNELQQIVNDLTISDFYPTLSVKGSVGLGPNKYISSEEGKVIST
                     ESKDFMQNGIKNIVESNIGVGGIKLAECRNI"
     gene            complement(2138..2446)
                     /locus_tag="VLA74_08775"
     CDS             complement(2138..2446)
                     /locus_tag="VLA74_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50838.1"
                     /translation="MTNLFGAFAIHNPESCPMNNVESKRIFLEIKDKLEKNKSKYGVK
                     NIEAFYMSVLEHEWMIIFEAESAHDIESLCIEAGIGTYNTVKIVGLKRYDDVHNKIGK
                     "
     gene            complement(2602..3663)
                     /locus_tag="VLA74_08780"
     CDS             complement(2602..3663)
                     /locus_tag="VLA74_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSF50839.1"
                     /translation="MKAAVYHEHNKDPRKVVKIEEIEIPKIKHNQVLIKVEAASYNYN
                     DLWGIWGEPIKIPLPHISGSDISGTVVDVGENVLNIKKGDRIVAHPNLTCRICKDCTS
                     GKEYDCRQRQVWGFQTGPLWGGFAQYTYLPEVNVIKISDNLSFQDAAAISMVGMTAWH
                     MLVTRANIQPGQTVLIMGGGSGMGIAGIQIAKLFNCDVIATAGNQEKMDKCLELGADH
                     VVNHRESDWYKKVRNLTTNNNQGGGVDIIFEHIGKSVFAQEVSLLNMGGTLVSTGATT
                     GYDSKLDLRYLFFRGLNLIGATQGTKAGLEEVIKWTSKGKIKAVIDTVYPFENMVNGH
                     IKMMESQLFGKLITTPQKL"
     gene            complement(4709..4993)
                     /locus_tag="VLA74_08785"
     CDS             complement(4709..4993)
                     /locus_tag="VLA74_08785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50840.1"
                     /translation="MITAKEFQYWANQIKTRSQERITDSHENRIRLRTNPRIYPWFEF
                     ILDPRDTEAMNSIIYIIKENLNSIPEEFRYEFQQVILDGLDRIKNRKNTG"
     gene            complement(5737..>6224)
                     /locus_tag="VLA74_08790"
     CDS             complement(5737..>6224)
                     /locus_tag="VLA74_08790"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSF50841.1"
                     /translation="QTDVTDNRNGTLPEQNNTTDDDLISIENELKPALVRVYENDTSP
                     NASQLSTKCINIYGCPSYGKSFSALESVIGMIGNVSSSTGILILEGKNDSQLPLEQAL
                     LLQQKLTEVNHPDHLIITYPDLGHTFVPSNQWVTSHGQIEEYVLKDMFEWLTSPARGI
                     H"
BASE COUNT         2132 a          986 c          909 g         2197 t
ORIGIN      
        1 atatctaagc taagtggtcg atcttcctca aaccatttct tccttgaacc attcattaac
       61 ctaacatctt taaatccata atatttgaaa atccagaaag caaaggttgc aaaccaattc
      121 taaagtcgcc ataaactatt agtgtagtat cattgtttac gcctatccgt tgtaatgaat
      181 cctccagaac ctgttttgaa attacatctc tcttagttga atcaattata tctctcttcc
      241 aatcaaagag gacagctcct ggaatatgac caagcatata gcttgtagca ggaatatagt
      301 caacctcaac aattcgtact tttggatcgt ttaaatgatc atttatccat tgcgtactga
      361 ctaaaacatt aggataagca tactccatta taatacacta atttccgtat agattctact
      421 atgttcaact ctttaattgt ttctcgaata gaatataaaa tttctttatt ataatgaaat
      481 cagaacatta actaatacat tgtcatagtt tttattatta tcttttaaga tcttgttttg
      541 tgaattaata ttctttcaga taataggttg actttttatg taagtattga tttcttatta
      601 attatagaaa cttgaagttt catgtcttga aatctgataa ttcttttttt aaggaaaagg
      661 aattggattt tgtcgatttg tcatctacaa actcgaatga aaatcgttct tttgtaaaag
      721 ataaattaaa ttgtcaagat aaatatatgt cagatcagga taaaaaactt ttggatgaca
      781 ataattcttt tccacaaata acagatattc aaacatacat tgaagaaact gagacaagaa
      841 ttttagaggc atttgaaaaa ggttctagac tttatcccaa aatagaaaga tctgaacagt
      901 ttttacagca gcatataggt tctaaactga aacttgttgt actttatgtt gatttggttg
      961 attctacatt gatgacgaga gatttttcag ttgataaatt agctacaata atacagatgt
     1021 ttacacagga aatgtctatt gcagcttcaa attttaatgg acagatatta aaatatgtcg
     1081 gagatgccgt aatagcatat tttcctattg aagtaaacga ttctgtttcc tgtagttccg
     1141 caataaattg tgcatttcat atgattacta ttatagaaca ggcaataaat cctatcttaa
     1201 gacgaaataa ttatgaccac ttgcaagtaa agatagggat agatgctagt gaacactcaa
     1261 ttattcaata tgtattaggt gaaaaatcct ataccgatat tttaggatac ggtataagta
     1321 tggcagcaaa attgactaaa ctagcaaagc ctaatcaaat tattacaagt catggaatat
     1381 atatctgcat gcattcatca ctaagaaaaa gattctctga attggagata gcgccgagaa
     1441 tatggaaata tattgatgaa aaacttcagc caggagtttg gaaatctttc gataaaatgc
     1501 aataataaaa agaatacatg attactaatt taaactaaat atttctacat tcagctaatt
     1561 ttattcctcc tactcctata tttgattcaa caatattttt aataccattt tgcataaagt
     1621 ctttagattc tgttgaaatt acttttcctt cctcgctact aatgtattta tttggtccca
     1681 acccaacact tccttttact gataacgttg gataaaagtc acttattgtc agatcattta
     1741 ctatttgctg aagctcattc tttgttaatg ttgcttttat tataaattta tcaaatgtcg
     1801 aattgtcaga aaccttttgt accgataata tgtttctaat atcatattga tttatgaaat
     1861 catctacact atctttaaaa ccgctaatga taagcgaata agatatcctg atggggcaaa
     1921 gcaagaaaaa ttgcaataca aataaagaga tatcaattat attctattga agaaaagcta
     1981 aaacagtatc aagctcaaat aataatgaat aattatagtg gctatttttg atctattaat
     2041 ctataaatga aataacaaag ttgtaaacgt tattataatt gtatatgatt gataagattg
     2101 gttaaagttc taataaatcc tgattatatc tcgttattca ttttccaatt ttattatgta
     2161 catcatcata tcttttcaga cctacaattt ttactgtatt ataggttccg attcctgctt
     2221 ctatacataa actctctata tcatgtgcac tttctgcttc gaaaattatc atccattcat
     2281 gctcaagtac tgacatgtag aatgcttcaa tattttttac tccatatttt gatttatttt
     2341 tctctaattt gtctttgatt tcaagaaata ttcttttact ttccacattg ttcataggac
     2401 aagattcagg attgtgtata gcaaaggcac caaatagatt tgtcatcaat atttctaaag
     2461 aaatggagat attaatttat atgttttata attaatattc tttattgaat tatctcttgt
     2521 acaaaatatc aaaaaatagt tttaattgtg tcaattgtat tgttagatca ttatttaata
     2581 aaaaatttta aatagaattt attataattt ttgtggagta gtaattaact ttccaaacaa
     2641 ttgtgattcc atcattttta tgtgaccatt taccatattt tcaaaaggat aaactgtatc
     2701 tattactgct tttatttttc ctttacttgt ccatttaatt acttcttcta atcctgcctt
     2761 agttccttga gtagctccaa taagatttag tcccctaaag aagagatatc tcaagtctag
     2821 tttagagtca tatccagttg tggctccagt agatactaag gtgcctccca tgtttaagag
     2881 actaacttct tgtgcaaata cagactttcc aatatgttca aaaataatat cgacaccacc
     2941 tccttgatta ttatttgttg ttaaatttct aactttcttg taccagtcag actctctatg
     3001 atttacaaca tgatcagcac ctaattcaag acatttatcc attttttctt gattaccagc
     3061 tgttgcaata acatcacaat taaacaactt tgcaatttga atacctgcta ttcccatacc
     3121 acttccacct cccattatca aaacagtttg tcctggctga atattagccc tagtaactaa
     3181 catatgccag gctgtcattc caaccataga aatagctgct gcatcttgaa aagatagatt
     3241 atctgaaatt tttataacgt tgacttctgg taaatatgtg tattgagcaa atcctcccca
     3301 taatggacct gtttgaaaac cccatacttg tctttggcga caatcatatt ctttgccaga
     3361 agtacaatcc ttacatattc tacaggttag attgggatgt gctactattc tgtctccttt
     3421 ttttatattt aaaacatttt ctccaacatc tactactgtt ccggaaatat cgcttccaga
     3481 aatgtgagga agaggaattt taattggttc tccccatatt ccccaaagat cattgtaatt
     3541 ataagatgct gcttcaactt ttataagaac ttggttatgc ttaatttttg gaatttctat
     3601 ttcctctatt tttacaactt ttcgtggatc tttattatgt tcatgatata ctgctgcctt
     3661 catatcacta ataaaaataa agtaggaaat ttaaagaata ggtttacaaa atattgtaaa
     3721 aaaattatca aaaactaagg ttttgtaatt aatttaataa taattattgc caaatttagt
     3781 gttccattaa cattaatttc tattacattt tttagttgac tgaaatatta tatctacaaa
     3841 agaaagaata gtataaagtg tgtaatcatg ggaataatga cttaagaata acattctgta
     3901 cacaattaag aggtaaattt cattatttca taaattgaac aaaataaata aacctaaatt
     3961 taacaggtaa atagagttta ttattacttt tcatcaatat caatagattt tttggtaaag
     4021 ttcttcagat aaaagatgaa attaaattac tactgaaatg gattaaggat taagtataag
     4081 ttagttcatc aaatgaatta agtagacgta aataaaacta aaggaattca tatcgatcta
     4141 aaagcaaaga agatactaaa atcataaaga tatgtataat atcgtccgta tcgtcctatc
     4201 gaccggaaaa tcaaaatcaa gcacgaaata aggaagaaag tctggtcgat ataacggacg
     4261 atactgcaga acaagaagaa gtatcgccaa agaaaatatt gaaaattaag cacgaaatta
     4321 caataatgga cgatttggcg atacatacga tactttacat atcaatggaa aagaagaaac
     4381 aatgctgtat tgtagccatt gtgatttatt tttatttaag ttatggagga agaaattatt
     4441 agacattcga ttaatgctca tccacgcaag ccggcacaac cagccaaaca aagctgcaaa
     4501 catctataag agatcggtgg tggctcatat atacagcagc tcacacatat tctcattcaa
     4561 caagcaagac cttaccgaag taagataggt cacgcataac aagggatttg ctagttgggt
     4621 aagagaatag atagcaagaa agacttttac atgtattcaa gagatctaat attcaaataa
     4681 ttcttatcaa ttttatattt tagtagaatt aaccagtatt ttttctattt tttattctat
     4741 ctaatccatc taatattacc tgttgaaact catatcgaaa ttcctcagga atactgttta
     4801 aattttcttt gattatataa attattgaat tcattgcttc tgtatctctt ggatccaaga
     4861 taaattcaaa ccatggatag attctaggat ttgttcttaa tcttattcgg ttttcatgag
     4921 aatcagtaat tctttcttga gatcgagttt taatttggtt agcccaatat tgaaattctt
     4981 ttgcggttat cattttaatt aattataagt ttgaataata ttaaaaaaga gaggtaggga
     5041 agaaaagttg ctgttttcac tggctcttat cctttgccac ggcatcgatt gtgtatgtta
     5101 cagtgaactt ctctccgctt accgtgtgaa atgcgagttg attacctgca aagttcatag
     5161 aaccagcata aaaacctcga attgattcgg ctggtgctcc agcttgtaat atcagtgata
     5221 ttgcggttgt tccgttacca aatggcgcta aacataaaat gggattcgaa cccataaggt
     5281 atacgtctgg gttcctattt tataattttt tgtattgaat ggatgcaatc tatttcatgt
     5341 ataaaactgg atacaattct ttagttctat atataatgat accgcatttg agaaatattt
     5401 tattaataaa ttgaatgaaa gaggtaaatt catcttaaat tgagagccaa atttccatag
     5461 gacaattaag ctcacatttt gttctacaag gtacaatttc ctttaattca ttttttaaat
     5521 tattactgca tctacaatag aaaaagcatc tacaatagaa aaaagctaat tctgatgaga
     5581 gttactgtaa atgaggaagt ctgtaataac gattacattc agggatctga tctgaggaag
     5641 attgtaacca caagcaacaa tcaacagcaa aacagacaac aagtaacact attttctagt
     5701 aacatatgga acaactcaat ttctctagtg tctaaactag tgtattcctc ttgctggaga
     5761 agtgagccat tcaaacatat cctttaggac atactcttct atttgaccat gtgaggttac
     5821 ccattgattg gaaggaacaa atgtatgtcc aagatctgga taggtaataa ttagatgatc
     5881 aggatgattc acttctgtta atttctgttg caatagtaac gcttgttcaa gtggtagttg
     5941 gctatcattt tttccttcaa gtataaggat accagtactt gaagaaacgt tccctatcat
     6001 gcctatgaca ctctccaggg cagaaaacga tttgccataa ctagggcaac catagatgtt
     6061 tatgcatttg gttgacagtt gtgaggcatt tggagatgta tcattttcat atacccttac
     6121 aagtgcaggc tttagctcat tttcaatact aattaaatca tcatcagtag tgttgttttg
     6181 ttcaggtaat gtaccgttac gattatcagt aacatcggtc tggg
//
LOCUS       DATIAS010000436         4038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1576042, whole genome shotgun sequence.
ACCESSION   DATIAS010000436 DATIAS010000000
VERSION     DATIAS010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4038
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576042"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VLA74_08795"
     CDS             complement(<1..267)
                     /locus_tag="VLA74_08795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50842.1"
                     /translation="MILSFKRERTSSEIIMYGLYLYFLGLSFRNVSRAIEPFVQRSHV
                     AVWEWVQKFNHKQIYPCKRVSAFLIDETMVQIGDTKAWLWVAVEP"
     gene            605..859
                     /locus_tag="VLA74_08800"
     CDS             605..859
                     /locus_tag="VLA74_08800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50843.1"
                     /translation="MFAEFIKEQKGLNLSQIDSDNILLFLDSRKSYREQDPDQKWITT
                     WNDYLWRIKIFYRWYYNTKILKNNIFDLITSRRRIWINNI"
     gene            complement(885..1361)
                     /locus_tag="VLA74_08805"
     CDS             complement(885..1361)
                     /locus_tag="VLA74_08805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50844.1"
                     /translation="MTIDQQNSNFEYGNNSNNIVNSRKSKFLIEERRRLVAKLWSQSK
                     SETDIARELHCNVSNICRDIKFLKKLSQQFVFDLAKDLGFYYKGCIDTMDEIQQKCWS
                     IYNDDRVSQKGKLQALKIIKETCESKFSLIEKGPSVMALNSLQERVEKIEANNEFK"
     gene            1822..3429
                     /locus_tag="VLA74_08810"
     CDS             1822..3429
                     /locus_tag="VLA74_08810"
                     /inference="COORDINATES: protein motif:HMM:NF013959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50845.1"
                     /translation="MLNGKKSFRTRMTHKIFSASSNICFLYLVAFLVVIGNLSFQQNF
                     VSAYETSTTLPSTYHQHNTESNNVESSLIPIIASEKQPLPSLVMNASNDDNNNTNTKI
                     NNQNTSVLSSSSPSLHANAIQVNADFNNDGFADLAIGVPNEDVGSLEDAGAVNVIYGS
                     ASGLSSTVKADQFWSQNTPNVEEVAETRDQFGSALSTGDFNNDGFDDLAIGVPTEDVD
                     NLPNAGTIQVIYGSTSGLSSTVKADQIFQQGVGGLDDILEERDNFGLSISAGDFNNDG
                     KDDLAVGVPNEGITPQGSDGIVQVIYGSSSGLSTSEVLADQLFQQGVGGLDDIAEFLD
                     TFGSSLAAGDFNNDGKDDLAVGVPLENFGGFSNVGIVQVIYGSSSGLSPSAVLPDQLF
                     LLADGSTPGNNDLYGLTLSAGDFTNGEGDDLAVGAPTKSLGSSTNAGIVHVLYGSSSG
                     LGNNFVFANHILAQGINGLDDIIETDDEFGSSLSSADFNGDGSADLAVGVSGEDVGCI
                     SNAGAVNVIYGSHISGLVPISHQFWTD"
BASE COUNT         1264 a          657 c          679 g         1438 t
ORIGIN      
        1 tggttcaact gctacccata accatgcttt tgtatctccg atttgtacca ttgtttcatc
       61 tatcagaaat gcagatactc ttttacatgg atagatttgt ttgtgattga acttttgtac
      121 ccattcccag acagcaacat ggcttctctg tacaaatggt tctattgctc ttgatacgtt
      181 acgaaaactt aaccccagaa aatacaaata taatccatac ataattatct cgctggatgt
      241 tctctcacgt ttaaaagata aaatcaatag aatatgagag gatattccca gctatagccc
      301 tttttttgct taacttaaca cgaccaagtt tctaataata aaaactaaat attatgtggt
      361 agaaccctac tacatggacg attccactcc cgacgggccc gtttttatca gtgttcaaat
      421 acaccttatt ctatataatt acaacaataa ggtatgagtt actctcgcag attagacaat
      481 gtattaaagc aaattgatta tgtagaagat aaaataaata aagatctaat aaacgaattc
      541 aaaatatctg atattaaagg atgcaaatgc aaattatcaa cgaaactgta tcaaagtcat
      601 gttgatgttt gcagaattta taaaagaaca aaaaggtttg aacttgtctc aaattgattc
      661 tgataatatc ctattatttt tggatagtag aaaaagttac agagaacaag acccagatca
      721 aaaatggatt acaacatgga atgactatct atggcgtatc aaaatatttt atagatggta
      781 ttataataca aagattttaa aaaacaacat ttttgatctc attactagta gaagaagaat
      841 atggataaac aacatctaga cgatttgtta gttctttaat agttttattt aaattcatta
      901 tttgcttcaa ttttctcaac tcgttcctgt aatgagttta gagccataac agatggtcct
      961 ttctctatca aagagaattt ggattcacag gtttctttaa tgattttcaa tgcctgtaat
     1021 ttaccttttt gagaaactcg atcatcatta taaatgctcc agcatttctg ttgtatctca
     1081 tccatagtat cgatacatcc tttataataa aatcctaaat ctttggctaa atcaaataca
     1141 aactgttgtg atagtttctt tagaaatttg atatctctac aaatattgga aacattacag
     1201 tgtagttctc ttgctatgtc ggtttctgat tttgattgag accataattt ggctactaat
     1261 cgtcttcgct cttcaataag gaatttcgat tttctgctat taactatatt attactatta
     1321 ttaccatatt caaagttaga attttgctga tctatggtca attattgcat ttatatatgc
     1381 agtttaaact tttatatttt acttttaatg aataaaatcc ctttacaatt aacttcataa
     1441 aatgattttt tgttatcaaa aaattttgat aaatgtataa ttctctttat tttagtttct
     1501 tttgtagatt ttttaatatt aatctcattt tcttctgcaa tgatataacg acaaattgtt
     1561 tctacattaa ttggatttct ctaataataa ttaattaata tttttgaaat atatggtttt
     1621 tgatacttag ttataatatc gagtttcttt ttatttcttt ttgtatgtta ttattttcaa
     1681 tattattgtt gtaatttagt attagcaaat tattattatt ttattattaa tacgttcaac
     1741 atttttgaat ctcctttata tgtgaatttg atatgataat tttacttaga aatatataca
     1801 aatagatact gaatataatg tatgcttaat ggaaaaaaat cattcagaac acgaatgact
     1861 cataaaatat tttcagcatc aagtaatatt tgtttcttat atctagtagc ttttctagta
     1921 gtaattggaa acttaagttt tcaacaaaat tttgtatctg cctatgaaac ctcgactaca
     1981 ttacccagta cttatcatca gcataataca gaatctaata atgttgaatc tagtcttatt
     2041 ccaattattg cctcagaaaa gcaacctttg ccatctcttg tcatgaatgc aagtaatgat
     2101 gataataata acacgaatac aaaaataaat aatcaaaaca ctagtgtctt atcttcttcc
     2161 tctccctcgt tacatgctaa tgcgatacag gtaaatgctg actttaacaa cgatgggttt
     2221 gcagatttag ctataggtgt accaaatgaa gatgttggct ctcttgagga tgctggcgct
     2281 gtcaatgtca tctatggctc cgcttctgga ctgtcatcta ctgtaaaggc agatcagttc
     2341 tggagccaga acacaccgaa tgtggaagaa gttgcagaaa caagagatca atttggctcg
     2401 gctctctcaa ctggtgactt taacaatgac gggtttgatg atctggcgat aggtgtacct
     2461 actgaggatg ttgataatct cccaaatgca ggtaccatac aggtaatcta tggctccact
     2521 tctggactgt catctactgt aaaggcagat cagatattcc agcaaggtgt tggtggtctg
     2581 gatgatattc tagaagaaag agataatttt ggcctatcta tctcagcagg ggactttaac
     2641 aacgacggta aagatgattt ggctgttggt gtacccaatg aaggcattac tcctcaaggt
     2701 tctgacggaa tcgttcaagt catctacggt tcatcctcag gtctgtccac atctgaggtg
     2761 ctagcagacc agttattcca gcaaggtgtt ggcggtctgg atgatatcgc agagtttctt
     2821 gataccttcg gttcttctct tgcagcaggg gactttaaca acgacggtaa agatgatttg
     2881 gctgttggtg taccattaga aaattttggt ggtttttcta acgtaggaat cgttcaagtc
     2941 atctacggtt catcttcagg tctatccccc tcagcagttt tacccgacca gctattcctg
     3001 ttagctgatg gttcaacacc agggaataat gacttgtatg gcctcactct atccgccggt
     3061 gattttacca atggggaagg agatgatttg gctgttggtg caccgactaa aagcctcggt
     3121 tcttctacaa acgctggaat cgttcatgtg ctttatggat catcctcagg tcttgggaat
     3181 aattttgtct ttgcaaatca tatactagcg cagggtatta atggtcttga tgatattata
     3241 gaaactgacg acgagtttgg ttcttctctt agttcagctg attttaatgg tgacggttct
     3301 gcagatttag cagttggagt atctggtgaa gacgttggtt gtatatcgaa tgcaggtgca
     3361 gtaaatgtca tatatggtag tcatatctct ggattagttc ctataagtca ccagttctgg
     3421 acagactagt tctggacaga ccagttctgg acacaaaaaa ttcataatga gacacaaagg
     3481 gataatgcag aaagcggaga cggtatgggt gagtaattat aaaaataaaa aacatctact
     3541 attttttata aaatgataaa tattataaaa aaataggttc tattgaatct ttgggtgttg
     3601 tagacgggtg ttcagctttg aatgataaac ctaagtttct gcattatata acatgttaac
     3661 cccctcgaaa aaataaacca tgtcatcgtt aatcctgtaa tcgaaaatct ttttacagat
     3721 atgttttgac ggttctgact acatgaaaat cttctgggtt atacctttat tgtatataat
     3781 gttggctagg ttgaaagtta acatactcca tataagaatg aggttctgac tgaactttat
     3841 ctgaagtggc tatcataata ctcttagaga gtgtatggat gtttgcaacc tgttagcaga
     3901 tatttttata ttgaatttaa atacagtttt cataaatctt tcctttcttt ttcatctttt
     3961 attttgttag aaagataata ttttataatt tctttagtta ctgaagattt gtattctaaa
     4021 cgaaccattt tcttattc
//
LOCUS       DATIAS010000437         3741 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_487722, whole genome shotgun sequence.
ACCESSION   DATIAS010000437 DATIAS010000000
VERSION     DATIAS010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3741
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487722"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(719..1309)
                     /locus_tag="VLA74_08815"
     CDS             complement(719..1309)
                     /locus_tag="VLA74_08815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50846.1"
                     /translation="MTNKKDESSKNGIIFIYISLSILAAITISEVFSREINQYYFHAL
                     VWIGSFLVFFLFFRNRIIDSVKIIKSRIKKSTGWPLRVKIMNGICWAGPFFFIIFMPN
                     IHEYLILLGIGIGNISTALIFLKYNRLKNVDQMIVGQICLISIIIIAVLYQYNIVEKV
                     HGEFLARILISLAYGIGGIYSLLSNSQDTYSKDVQI"
     gene            1470..2780
                     /locus_tag="VLA74_08820"
     CDS             1470..2780
                     /locus_tag="VLA74_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50847.1"
                     /translation="MTPFFDFLKKKSNLYKKERDSYNVNEFVDHSNEHLQINSFDTKD
                     ILQRYIGEKVKQLSRRIEPLYHESLQHMNNIENIALDLEVAKIDVEERSFESLLINAK
                     RMVISSIKKEISSFPEVPKSFQDIKEFHQHLDSMVHRFSELSSSHKKVFNFFIRKYAE
                     RLENEFKNISSVSHECKREIYLYEDQLNFLNSSLDGLNVIADKKEMIHTMESLLGDKQ
                     HSIDDLRSNIKKVESEINSILNSEKYHNAQQTKQMQTLVEKEKKEFHRELVNSFSKVS
                     RAFNKYSYGMNKSVIHKIQVMTEKPWEIFSQDIASYGDLIRDVKTSMVKRKINVKDSD
                     KILAYIDNILDSLDEFKNREVNLDKKLHTLQNNPDLSIFSNIRELKEKKSYLSQELLS
                     KETSQRELQTDLEKNKKEIQDLRKPIEKCLLELTGKHYSLQVND"
BASE COUNT         1366 a          565 c          597 g         1213 t
ORIGIN      
        1 ccccgccatg tcaaggcggt atcctaacca ggctagacca ccggccccct cacagttatc
       61 tatttgatta tttttataag tgttattttg ttgatttgtg cttgaaggcg gctgctcgtg
      121 agtgaaattc gaacgtatat tcagatgact tggatgtgcc gagtcttggt taggatgatt
      181 attctttaag atgttactac atttagtaac cccgttactg tatttggtaa cattcaataa
      241 accactttga attaataatg gcagttccga ttcttgaaat acttgaattc agaacataaa
      301 aaccactata ttctgtatct gctaaaatcg tcttaattcc gaacacgtat gtttagattt
      361 gtactatcgg tctcagttta cgtaacttct aaagcgttat tgatatataa agatgaaagg
      421 agaagttatg tttctgtttg cacttggata caaatatatg gttcatctca aacttacaaa
      481 acaaaaagta tattcgtgtt tatggtgagt gaacttatta ttcagatcgt taactagcat
      541 tattggttat ggttctgtat taagccaatt cactcttcag tgttttggaa tctatatgtc
      601 aaaagataga aacatgattt cgttgaacaa ttcataacct gatgcaattc ttgttctaga
      661 tataatactg tcatactaaa taacaatcca tactaagtga ctaatcacac tgattttttc
      721 aaatctgtac atcctttgaa tatgtatcct ggctattaga caatagacta tatattcctc
      781 caattccgta ggctaaggat atcaatatcc ttgctaaaaa ttccccgtgt actttttcta
      841 ctatattata ttgatacagt accgctatta ttattataga tattaaacaa atctgaccaa
      901 caatcatttg atccacgttt ttgagtctgt tgtatttcaa aaatattaaa gcagtagaaa
      961 tatttcctat tccaattccc aacaatatta aatattcatg aatattgggc ataaatatta
     1021 taaagaaaaa tggaccggcc caacatattc cattcatgat tttgacgcgt aatggccacc
     1081 cggtactctt ttttatccta gatttaatga ttttaacgga atctattatt ctatttctaa
     1141 aaaacaagaa aaagaccaaa aaacttccga tccatacaag tgcatgaaaa taatattgat
     1201 taatttcacg tgagaaaact tcgctaattg ttatggctgc taaaatagat aacgatatgt
     1261 atataaaaat gatgccattt tttgaggact catctttttt attagtcatt aacaagattc
     1321 aggcatttta attatcctat aaacgtaatg taaattactt tatttctgtt cattttttta
     1381 ggacgactct agatgctatg attcattttc aattttcgga cacgagataa ataaaaagat
     1441 ttttgttgtt gttactatta ttatatttat tgaccccttt ttttgatttt cttaagaaaa
     1501 aatccaatct ctataaaaaa gaaagagatt catataatgt aaacgagttt gtagatcatt
     1561 caaatgaaca tcttcagatt aactcatttg atactaaaga tattctgcaa agatacatag
     1621 gtgagaaagt aaagcaatta tcacgtagaa tcgaacccct ctatcatgag tcgctacaac
     1681 atatgaacaa tatagaaaat attgccctag atctagaagt agccaaaata gatgtggaag
     1741 aacgtagttt tgaatccctt cttattaatg cgaaaagaat ggttatatcg tctataaaaa
     1801 aagaaatatc atcatttcct gaggttccta aatctttcca agatattaag gaatttcatc
     1861 agcatctcga ttctatggtc cataggtttt ctgagttaag ttcttctcat aagaaagttt
     1921 tcaatttctt cattagaaag tatgcagaaa gactggaaaa tgagtttaag aatatttcaa
     1981 gcgtctcgca tgagtgcaag agggaaattt atctctatga agaccagtta aattttttga
     2041 attcatcttt ggatggatta aatgtcattg cagataaaaa agaaatgata cacactatgg
     2101 agtcgttgtt aggtgataag caacatagta ttgacgattt gagatcaaac ataaaaaaag
     2161 ttgaatctga aataaattcg atcttaaact cagaaaaata tcataatgca caacaaacaa
     2221 aacaaatgca gacattagtc gagaaagaga aaaaagaatt tcatagggaa ctggttaata
     2281 gcttcagcaa ggtcagtaga gcatttaaca aatattccta cggtatgaat aaatcagtaa
     2341 ttcataaaat ccaagtaatg acggaaaaac cttgggagat attttctcaa gacatcgcga
     2401 gctatggtga tctaattaga gatgtaaaga cttcaatggt aaagagaaaa attaacgtta
     2461 aagattctga taaaatactc gcttatattg acaacatact ggattcatta gatgaattta
     2521 agaatcggga agtaaattta gataaaaaat tacatacatt acagaacaac cctgatttat
     2581 ctattttttc aaacataaga gagttgaagg aaaaaaaatc ttatctttcc caagagttat
     2641 tgtcgaaaga gacttcgcaa agagaattac aaactgattt ggaaaaaaat aagaaagaaa
     2701 tacaagattt aaggaaaccc atagaaaaat gtctacttga attgactggc aaacattatt
     2761 ccttacaggt taatgattag aatagaattg aaaggttgag acaaagattc aaacttcgtt
     2821 agtacacgtc tcgtatccac aagaaataat gggaagtaag gcagcaacct aagatcttaa
     2881 agttaaaaca aggctggagt ccaaatgtcg gtgaccacat tttaaatcgg gattcagata
     2941 gctggtggtt atactacgct ttttgtaaac aacataacaa gggaaggaaa aagttagaaa
     3001 aatggtatgg tgatggttat catcgcggcg tctatcgtca tctcgggtct gtaaaatctt
     3061 tctagaatag tttttaacaa gattagtatt gtaatacaaa gaaaacacgg ctataattta
     3121 tgatatttac agatataaac aaaacaatgg ttcgtaaaat aatcatcagg cacacaagct
     3181 aagcatttat tgtttttact aatttttaca ccagatctgc ttttataaga cggaaagtaa
     3241 aatataataa tatcttctct aattacaacg gtgaaaatct ccgatgttaa ccatcataat
     3301 atatcgattt ctacatgcaa gtatttttag gaacagaatc aaaactaaag gaaatattat
     3361 atgcattagt taaaaatgca aataggatgt acagacatgc tagattcgaa ttatcctttg
     3421 tattacaaac atgtatcaga ggcatctagt tttggtagac cacatggtga gatgtcataa
     3481 gactctacta caatgaacta cggaagctac aatgcaaacg tcaggatatt ttaagaggta
     3541 agtaggtcaa aatatagaaa aacctggtat tactaacttc tcttatttta ctttcacctt
     3601 aaataaggta aaataatttt aaaaaatacg aaaaaagcat attttttggc agttttgtaa
     3661 tacctatgat attttataaa aaatcttaga gtaattggta cataacgttt ctaacttata
     3721 ctggtactat ggtaaggtca t
//
LOCUS       DATIAS010000438         2504 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_78763, whole genome shotgun sequence.
ACCESSION   DATIAS010000438 DATIAS010000000
VERSION     DATIAS010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78763"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..407)
                     /locus_tag="VLA74_08825"
     CDS             complement(132..407)
                     /locus_tag="VLA74_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018003564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50848.1"
                     /translation="MGSDNMNKDNFCKIHNTAYRNGKTFEECKQVAVSVTEHLSKEIE
                     TKQEISWAKVLEYVDHDELIYKLTLKYLRQKGYDIGNNKTPIIKKSK"
     gene            1008..1673
                     /locus_tag="VLA74_08830"
     CDS             1008..1673
                     /locus_tag="VLA74_08830"
                     /inference="COORDINATES: protein motif:HMM:NF025580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4328 domain-containing protein"
                     /protein_id="HSF50849.1"
                     /translation="MSYPDRLHWYVPLNRLFRFLTIVLCIGILFNLISIGMSVISFTA
                     SEDGNLGLYSNMAKASGSVSIFSSDFTYLYGALYSMVFLTISIIFLYWFYRSYSNLYS
                     LEVNGLKFSPIKAVGYCIIPIINLWKPYYIMKEIWTFSHAASLSNEFSLSDSNSNVKR
                     WWVLFLFSIFFPLIGGSLFAQPISNVITNIALILASVMLISILKEITIGQEKRYNSVN
                     NTR"
     gene            1968..2204
                     /locus_tag="VLA74_08835"
     CDS             1968..2204
                     /locus_tag="VLA74_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50850.1"
                     /translation="MANRLSISEDNQVLKKVSPEARYQEYKSQWYFHKSSWYRRNNGQ
                     GSYDGIGCNQFTGCIQECKFYNSFGMLNEHEGFD"
BASE COUNT          817 a          353 c          364 g          970 t
ORIGIN      
        1 taggtttacc tggtagcggt cgttaatatt tttcacgtca ggtgaataaa attgttacca
       61 aggcaacagc ttcttttatt attttattgt tattacgatg taattcatct tttatgattt
      121 ccattcattt tttacttgct cttttttatt atgggcgttt tattattacc aatgtcatac
      181 cctttctgcc taaggtattt taaagttaat ttgtaaataa gttcatcatg atctacatat
      241 tcaagtactt tagcccatga gatctcctgc ttggtttcaa tttctttaga taaatgttct
      301 gtaacagaaa ctgcaacctg tttgcattcc tcgaatgttt tcccatttct atatgcagta
      361 ttgtgaattt tacagaaatt gtctttattc atattatctg aacccaatat tgatatttaa
      421 gatacatgtt atttaatttg atctattcta tcttagaaca tcataacgac gatttattat
      481 aaatgaacag gtcatcattt gctttcaaaa atttacttta gatttcaatc atgctagaac
      541 ttttgtagta ctagaggaac tggaaacgaa tatttcattt agtttctatc ttatagatgt
      601 gaaattacat catattagat ctattccgat cctttgattt ggataagtta agttcaacag
      661 catttaggag gaaatataat aaaaggatcg taaatatgat ttttacattc ctttagatga
      721 tatgaagtat ataaatactt atttagatca catttttttt aatatattcg tttgccagtt
      781 taggtctctg aaaagtcaga aatggattca cactttaaaa attgcttatg agtcacacaa
      841 tttattaaac gtttaaacat ataaaattta attattttaa tctaattaga ataagtcaat
      901 atttgttgaa aaaatatttt tagtagaaat gtacaggata tattggctat ttctcaaaca
      961 tcactcactc taaaaagctt ttatctacca tttttttaag aataaatatg agctatccag
     1021 atagactaca ttggtatgtt ccacttaaca gacttttccg atttttaact attgttcttt
     1081 gtattggtat cctatttaat ctgatttcta tcggaatgag cgttatttca ttcactgctt
     1141 cagaagacgg caatcttggc ctatattcaa atatggctaa ggcttctggt agtgtatcaa
     1201 ttttttcttc agattttacc tacttgtatg gcgccttata ttcaatggta tttctaacga
     1261 tatccattat ctttctatat tggttctata gatcttacag caatctttat tcattagagg
     1321 taaatggtct gaaattttca ccaataaagg ccgtgggcta ttgtatcatt cctattatta
     1381 atctctggaa accttattac atcatgaaag aaatttggac ttttagccac gctgccagtc
     1441 tttcaaatga attctcttta agcgattcga actctaatgt taaacgctgg tgggttttgt
     1501 ttcttttttc gatatttttc cctctcatag gcggatccct atttgcacaa ccaatttcaa
     1561 acgttataac aaatatagct ttaattttgg catctgtcat gcttatttca atattaaaag
     1621 aaataacaat aggacaagaa aaaagatata atagtgtgaa taatactcgg taggtcaaca
     1681 aattaaaaac acgatagata gttatccata agtgtctttt ttagagtaat atacaaatat
     1741 tgtgaattta ttattaaaga aagaaaatta aagaatcaac tattgattta ttttcacatt
     1801 attttttcgg attggatatc tcttgatata ttcgttaaac cttcctagga gtaaataagg
     1861 gtgtcgtata ttaattaaat ctttaaatta tctgaataat tatagagaat tttttcacag
     1921 gttaatctta ctgtattcat ataaatgtta aacgattgtt attatctgtg gcgaacaggt
     1981 tatcgatatc cgaagacaac caagtattga aaaaggttag tccagaagct agatatcagg
     2041 aatataaatc acaatggtat tttcacaaaa gctcatggta cagaagaaat aatggtcagg
     2101 gtagttatga tggaattgga tgtaaccaat ttactggttg tatacaagaa tgtaaatttt
     2161 acaacagttt tggtatgctg aatgaacatg aaggctttga ctaaaagaac aacggtaatt
     2221 ttttttctgt cttgggttcc taaaagaaat ttaatagaga tttctataat agacttatgt
     2281 cacttgttat agagattggt ttgtgatgtg atgatctaca aaataaaatc tattgaaaat
     2341 aatttgcgtt tacttttcgt gtaaaaaaac tctatttccg tataatactt aatgattcca
     2401 tttcttggtt ttcatatgat atttaggatt ggtcaaaaaa taaattttat catacgaaaa
     2461 tacctttcct aaatgatatc taatgaatat ttctatgcat ttta
//
LOCUS       DATIAS010000439         3263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_897412, whole genome shotgun sequence.
ACCESSION   DATIAS010000439 DATIAS010000000
VERSION     DATIAS010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3263
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_897412"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            336..545
                     /locus_tag="VLA74_08840"
     CDS             336..545
                     /locus_tag="VLA74_08840"
                     /inference="COORDINATES: protein motif:HMM:NF014723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin VapB family protein"
                     /protein_id="HSF50851.1"
                     /translation="MSKLKHITVNEEVYQKLKNLDKAGDSFNDVLVRILEKKIQLLES
                     DSRVGAREKTLTNSLPSVFKGDDKP"
     gene            760..990
                     /locus_tag="VLA74_08845"
     CDS             760..990
                     /locus_tag="VLA74_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50852.1"
                     /translation="MTKEEEITKFDSKNRSINYNINNSIPTKYYSNRVKEENSIKTLE
                     AINHSQYQRIIESNRRTRSNIAAISEKIKRSC"
     gene            992..1378
                     /locus_tag="VLA74_08850"
     CDS             992..1378
                     /locus_tag="VLA74_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50853.1"
                     /translation="MTFNINEYKDKIAEHKKKRSVNQCYYDYDLELDFSNKPKIPFDI
                     DDRWYYYKAYHYLKLGLFLNGKDAPPFKVKIDHLSSDIIYELSQLGSKDRRFVLKQAV
                     LRIFEDINFDLYHDSVSANLEIILVK"
     gene            1375..1728
                     /locus_tag="VLA74_08855"
     CDS             1375..1728
                     /locus_tag="VLA74_08855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50854.1"
                     /translation="MINNDNNENYKNNDINDLENVKRLLLQDQEKERNGKANEKQQQQ
                     KLQVKPNSIIITEQDKERNRILEEIQKLREENPDLTFEQWSNTLKEKRQKLNDKVNEY
                     FPKVSFKILLELDFV"
     gene            1774..2187
                     /locus_tag="VLA74_08860"
     CDS             1774..2187
                     /locus_tag="VLA74_08860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50855.1"
                     /translation="MGIVFAAPSSMKTKVIEILRKWHYSYFIDKFTAKSFVSHSATVA
                     KDKLKEVDLLPRIKDKIVLTPELSPLFTGKEEDTKEQFGIITRLLDGNGLETESGVHG
                     KRGYYGDYMFTWIGAAVDIPHSVYKFLSTISFKSI"
     gene            complement(2148..2618)
                     /locus_tag="VLA74_08865"
     CDS             complement(2148..2618)
                     /locus_tag="VLA74_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50856.1"
                     /translation="MTEEIIFNKFEKEKKVIELHLAGKTIREIAKQVRMSFGDTSKKI
                     KEYERKIKLEERKKDYGKNNNKDNNKIKRISKSSRAYELLLKGKTPVEVAIELDLCFQ
                     DIRKYWIEFLRLQKMNELYQLYVDNEYHLNYLFKVYYFLLRNQIDLKEIVDKNL"
BASE COUNT         1225 a          437 c          460 g         1141 t
ORIGIN      
        1 catctaacct ctcgaagtac gcttgtacac caactttcat caggaagaga tgtggttaaa
       61 gtaaacacat ctttaattag gtgttatgca gctttaagct tggctgaaac atttgttaat
      121 aagagcgatc caagtttata aaatattgaa gtataaaatt ttattttctt tttttaaatt
      181 gctcacaatt tatcttcaaa cttgagataa attaataata tttacactcg gaaagaacaa
      241 ttccaaataa tatttctact gctataggta actacttttg gtaaattatt attaattaac
      301 cgtaagaata agttctagtt aacctaatta aactgatgtc aaaactaaaa catattactg
      361 taaatgaaga agtctatcag aaattaaaaa atctagacaa agcaggagac tcatttaatg
      421 atgtcttggt tagaatttta gaaaaaaaaa ttcaactgtt agagtctgat tctcgagttg
      481 gcgcccgtga aaagactcta acaaacagct taccatcagt ttttaaggga gatgataaac
      541 cttagtcgat aatactacat ccttgaatat aaataattct caacataaga tatgtaagca
      601 gctatggaca ttaggtgata aacatttagt tatcattgat aagtcgataa tagaaaagtt
      661 aggcattaca gagaattcta caattttctt agagcaagag atcacacatg acaatacaat
      721 tgtaatgaga atcaaaaaat tctaaataag tgatagaaag tgaccaagga agaagaaata
      781 actaaatttg attctaaaaa tagatcaatt aattataata taaataattc tattccaact
      841 aaatattact ctaatagagt taaggaagaa aattctatca aaacccttga agccattaat
      901 cattctcaat atcaacgaat cattgaaagt aatagaagaa ctagatctaa tatagctgca
      961 ataagcgaaa aaatcaagag atcttgctag tgtgacattt aatataaatg aatacaaaga
     1021 taaaattgca gaacataaaa agaaaaggtc tgtcaatcaa tgctattatg attatgatct
     1081 ggaactagat ttttcgaata agcctaaaat tccatttgat atcgatgatc gatggtacta
     1141 ttacaaggca tatcattatc ttaaactagg tttattctta aatgggaaag atgcacctcc
     1201 attcaaggta aaaatagatc atttatcatc ggatataatt tatgaactaa gccaattagg
     1261 ttctaaagat cgaagatttg tcttaaaaca ggctgttttg cgtattttcg aagatatcaa
     1321 ttttgatcta tatcatgatt ctgtttctgc taacttggag ataatactgg taaaatgatt
     1381 aataacgata ataatgagaa ctataagaat aatgacatta atgatttaga aaatgttaaa
     1441 agactattat tacaggatca agagaaggaa cgtaatggta aagcaaacga aaaacaacaa
     1501 caacagaagc tgcaagtaaa gcctaattca attataataa cagagcaaga caaagagaga
     1561 aatagaatat tagaagagat acaaaaacta agagaagaaa atcctgatct aacttttgag
     1621 caatggtcta atactttaaa agaaaaacgt cagaaactga atgataaggt caatgaatat
     1681 tttcctaaag tatcttttaa aatattatta gaattagatt ttgtataatc tattaagaca
     1741 attttaaaca ttgaagatat tatacttcca tttatgggaa ttgtgtttgc agctccgtca
     1801 tcaatgaaaa ccaaagtaat tgagatatta agaaaatggc attattctta ttttatagac
     1861 aagtttacag ctaaatcatt tgtatcccat agtgcaacag tagcaaaaga taaactaaaa
     1921 gaagtagatt tgttacctag aataaaagat aagattgtat taactcccga attgtctccg
     1981 ttgttcacag gaaaagagga agatactaag gaacaatttg gaataataac aagactttta
     2041 gacggtaatg gtttagagac agaatctggc gttcatggta aaagaggata ttatggagat
     2101 tatatgttta catggatagg tgcagctgtt gatataccgc actctgttta caagtttttg
     2161 tctactatct cttttaaatc tatttgattt cgcaatagaa aatagtatac cttaaataaa
     2221 tagtttagat gatattcatt atcaacgtat agttgatata attcattcat tttttgtaat
     2281 cgtaaaaatt ctatccaata ttttcttatg tcttgaaaac ataaatctaa ttcaattgca
     2341 acttcaactg gcgtctttcc ttttaacaat aattcatacg ctctactgct ttttgaaatt
     2401 ctttttatct tgttattatc tttattatta tttttaccat aatctttttt tctctcttct
     2461 agttttattt ttctttcata ttcttttatt tttttagaag tatctccaaa tgacattcgg
     2521 acttgttttg caatttctct aatggtttta cctgctaaat gtaattctat aacttttttt
     2581 tctttttcaa atttgttaaa tataatttct tcagtcatta tatatagata aaattaaaaa
     2641 agcagtttaa atatttttat tgttttcatt ttgttatcta atgttatcat cctattactc
     2701 ttgttaccat ctatttttca tcattcatag aaatttttcc attatatcat actattgtac
     2761 aacctaaaaa aatcaaaatt atttatcaag cttgtatcat cagaaaatat tggaaagaaa
     2821 agaaattctc acaagcttat ttactaaggc cattgaagat actatagaaa ctttacctta
     2881 tacaattcaa attgttcagg acccaatata tgatttagag aaaaagtgta actaatgatt
     2941 tagactttct tttaggtgta ttatttgcac aagtactttt gttttattat gtttaggctt
     3001 tgtaaactcc ccccggtaaa gccaacaact agcatagata aagatagaag taggagaaac
     3061 tttcttttca ttatttattg agcttttaat gattgaattg ataatcatat tgtattacaa
     3121 tattagttgt cttccaagct ttaccttttt ctatatttgt aacaatcctt atatttttgc
     3181 tagaagttat ttgattaaat gaagaatttt gatatatgta aaagatgtcg tcatctaaga
     3241 gagaatcatc tttatggtgt agg
//
LOCUS       DATIAS010000440         2417 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1713298, whole genome shotgun sequence.
ACCESSION   DATIAS010000440 DATIAS010000000
VERSION     DATIAS010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1713298"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1007..2269
                     /locus_tag="VLA74_08870"
     CDS             1007..2269
                     /locus_tag="VLA74_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50857.1"
                     /translation="MYALRAKETIRQYPKRLKIFFDCGMGSKLSLEEQANVFYTNSIK
                     NNSWTFLYFRKFIEYQKTRVAKEEITGTTIHNYYKVAKLFCKMNDIVINWDKLSKGLP
                     PQKHYADDRGPTKREIEKLLQYPDVRIKPILLTMLSSGIRLGAWDYLRIQDVTPIKDQ
                     KGNVIAGKIIVYSGEHDQYTSLITPEAWFSIENWINYRKQHGEIIKPESMLMRDIWQT
                     SERSYGAYFGLAKNPKKLQITGIKSLIERAIRSQDLLLPNDDKYPNDNSYDGLFSLEP
                     LKGKNVKNGKRMRPWKSINGIRKTYKTITEQKMKPANIELLLGHKLGISSSYYKPNLE
                     RDILPDYLQVVDDLTINQEHRLKRENQRLQEKNQEKDYVINTKLQEKDEQIESIKKNY
                     EIAIQSIRQEMEDKFQRIFSKIDVGKLS"
BASE COUNT          929 a          342 c          428 g          718 t
ORIGIN      
        1 aagagatttg gaagatggta taatgacatt aatgatgaca cttgacttac tgtgtttaca
       61 gatgaatata gggcatatga ccatctggaa gaacatggtt tcatacacaa aagtgtaatc
      121 cattcgcaga aagaatatgt aaatggtatt gtacacgtga ataattgtga atgcagaagc
      181 aatctatatc agatctggat aagaaaattc atgtgtgtaa acaagtacaa tttacagaca
      241 tattccaaga catttcagtt tattcataac aatagaacaa agacaagaga ggaaaggttc
      301 atggaaattc tttgtaatta gtagctgaaa cattcagaaa taagagcgat ttgaattatt
      361 tattttaggt ttaagttttg tcataaatat aaaaaacgag cgctgaatat taatggttat
      421 aggcagcaga tctctaaatt ttggtaacat ttttcaacgt tcactttata gactagcgcc
      481 acacctgaac taggcaactg aaggcaacag agccattgtt gggagtatta tcattcaccc
      541 taagtaaaag actacgttag gttgagcggt tgaatgtccg tctgccaaat cctgagccaa
      601 catagaaata cccttcattc tcgaatcttc caagaagtga gaatggtctc gcatcagatg
      661 tattatgaag cggaaagtta ggattagttt caattctatc tgtccattct acaattattt
      721 aatgctattt ttgctatgta ttataaagca tctgctaata tactagacat ttggtcatag
      781 ttgagttgat tatattctta ttctcctatt attagcataa ttatttcttc ggatatacta
      841 atataataca gggttaactt tgctagcaaa ggctatccct ttaggcccca tgtcgaaaac
      901 aatatgaacc tagattgtta atacagtata aaagaattga cctcttcaaa tagaagatat
      961 cgaaactaat gccatttcaa atgctcatac acctttagaa tcttttatgt atgctttaag
     1021 agcaaaagag acaataagac aatatccaaa aagattaaaa atattttttg actgtggtat
     1081 gggttctaaa ttatctttag aagaacaggc taatgtattt tatactaact ctattaaaaa
     1141 caatagttgg acattcttat attttaggaa atttattgaa taccaaaaga caagagtagc
     1201 aaaagaagag ataacaggaa ctacaattca taactattac aaagttgcca aattgttctg
     1261 caagatgaat gatattgtaa ttaactggga taaactttct aaaggacttc ccccacaaaa
     1321 gcattatgcc gatgaccgtg gtcccacaaa gagggaaata gaaaaacttt tacaatatcc
     1381 agacgtcagg attaaaccta tattattaac tatgctttca tctggcataa ggttaggtgc
     1441 atgggattac ttacgtattc aagatgttac tccaatcaag gatcaaaaag gaaatgtcat
     1501 tgcaggaaaa attatagtct actctggaga acatgatcag tatacaagtc ttattactcc
     1561 agaagcatgg ttttcaattg aaaactggat aaattataga aagcaacatg gagaaataat
     1621 taagccagaa agtatgttaa tgagagatat ttggcaaacg tcagaacgaa gttatggagc
     1681 ttactttggt ctggctaaaa atccaaaaaa attacagata acagggatca aaagtttaat
     1741 agaaagagct attagatctc aggatttact tttacccaat gatgataaat atcctaatga
     1801 taatagttat gatggacttt tcagtctaga acctttgaag ggaaagaatg tgaagaatgg
     1861 caaaagaatg agaccgtgga agagtattaa tggtataaga aaaacataca agactataac
     1921 tgaacagaaa atgaagccag caaatataga actattatta gggcacaaat taggtatttc
     1981 atcaagttat tataagccaa atcttgaaag agatattttg ccagattatt tacaggttgt
     2041 tgatgactta actattaacc aggaacatag actcaaacga gaaaatcaaa gactacaaga
     2101 aaaaaaccaa gaaaaagatt atgttattaa tactaagctt caagaaaaag atgaacaaat
     2161 cgaatcgata aagaaaaatt atgaaatagc aatacaatca attagacaag aaatggaaga
     2221 taagtttcaa agaatatttt ctaaaattga tgtaggtaaa ttgagttaag ttagttcaaa
     2281 gactattata gacacttttt atgaatctgg aatcaggttt gggattgtag tccttggcga
     2341 tattagaaaa gaaaagagac gctatggtac tataaggagg accttttttg cctaattctg
     2401 aaaaaaatat ttcatct
//
LOCUS       DATIAS010000441         5865 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1576871, whole genome shotgun sequence.
ACCESSION   DATIAS010000441 DATIAS010000000
VERSION     DATIAS010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5865
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576871"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VLA74_08875"
     CDS             <1..434
                     /locus_tag="VLA74_08875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50858.1"
                     /translation="AKQQLLNQESPVSEILNRYKKELTKNIERQIPVPTFSISSEESK
                     QEASISQIIRTYGKHFNQIRKRYTDGVGGRCVMGLIMSYYGWDGKCITNAERRLYAAL
                     VALRRAGISKELLIELNDSGATFDDIADYLDKNCGLTSNNR"
     gene            875..2026
                     /locus_tag="VLA74_08880"
     CDS             875..2026
                     /locus_tag="VLA74_08880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50859.1"
                     /translation="MRTSVQKINNKLDNNSKSKELTKVNKDNRKSLTARVKPDDLIVF
                     NQRLKLFGFNSINELVHEFIAGRFPQITEDKQIDNLIENTNRNGQRTILKEGNTVDFY
                     KNVDLNDIYNYYQIMRQLHPNTCRDLISYFKRFRDLFFNEKAEELRILSPRIRSKIMD
                     AFRKFGQYYLYKYNDDSCIDLVSKIIRRYNLNAGNNDHSKLYIVDDNYLSEKIKTIFQ
                     LQGEIGLIVKFAVFTGLREDELVYTYRKDICSNLGGCSCEKLHVIEKPNGTSIILIQW
                     YRGHKKCYFTIAPTTLWNSFRCLPFFDYNPHIKSAHSYLKAKDKDLHFMWLRKAHYNI
                     MCRSMKPFEANILAGRAKTVDAKHYAMYELDMMTKSYTEAWKKFGITIS"
     gene            2070..2450
                     /locus_tag="VLA74_08885"
     CDS             2070..2450
                     /locus_tag="VLA74_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSF50860.1"
                     /translation="MNLVKIPIDQNTWTSIVKNYEMIEGAQLSNSFIILMALNESNKP
                     LNSTEISEIIALKTSGKIFKVSATLKDSLEHRLKRGGYVDSTDIPSKKGTMKPVKKSL
                     YSITPKGRELLKGWISFLNAYKSD"
     gene            complement(3172..4221)
                     /locus_tag="VLA74_08890"
     CDS             complement(3172..4221)
                     /locus_tag="VLA74_08890"
                     /inference="COORDINATES: protein motif:HMM:NF025464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparin lyase I family protein"
                     /protein_id="HSF50861.1"
                     /translation="MPISLLVLFLPIIVEGMVKSSNTSNTLNQSSISIEYNKTLLSTI
                     NFNTTELSSISAIDNLRYQISKILLKHYGVQLGFEEGDINSFWNWNGAEFDKNDINRS
                     HFEVITDSPKEGTKALKFIVHPDDVSNNGARTEVIHYSSNDFTKPILFDDGEEMWFHW
                     YTRIPENTQITNTWHIFTQWHQLPEPNGLPCPAGVTSQWCDAVPLGFNFKNSPQDGGL
                     VFELNVLNHTNANPNGFDNLWRENFVKGEWYEFLLHLIWSKCNNFRFDGKCIDTENKG
                     LIELWVNEDKKFTKTNRYTLDSDSQVYLKVYLKQGLYHGLQNRSQITWTQTIDHDGME
                     YLSCKTNFPFSWLVC"
     gene            complement(4524..5078)
                     /locus_tag="VLA74_08895"
     CDS             complement(4524..5078)
                     /locus_tag="VLA74_08895"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50862.1"
                     /translation="MLDNLQQKKEGFTVVSTDESFFFFYDSLVRKVWIKKDERPVVKI
                     TGSHQESVLFGATTSLEGKQQLFRQYNWFDENTFLDYLKQIHRKFPKCYLFLDKAKQH
                     YKSKKVLQYFDKHKKNLIPVYLPTASPEFMVLEEVWHIAKNDLLVLQYYSSFTDFRNK
                     ISTYFRTKRFNLDMRNCLLAKIDN"
     gene            complement(5036..5527)
                     /locus_tag="VLA74_08900"
     CDS             complement(5036..5527)
                     /locus_tag="VLA74_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50863.1"
                     /translation="MIRLYRKETSIKVKERMLLVVKVEHDNVIPAYAADELHRSRPWA
                     LYWLKRYREEGIEGLKNRPKSGRPPDIPREVVYEIQNELSSSKQEWTTKQVEDLIIRK
                     SGGGIRYHYTHIYRLMHKWGFKQKVSRKTHVNTASKEEKERFKKEQEGYWIISNKRKK
                     ASQ"
BASE COUNT         2099 a          843 c          865 g         2058 t
ORIGIN      
        1 tggctaagca acaactattg aatcaagaat cacctgtttc tgaaatttta aatagatata
       61 aaaaggaatt aacaaagaac atagagcgac aaatccctgt tccgactttt agtattagta
      121 gtgaagagtc aaaacaagaa gcatccatat ctcaaataat acggacgtat ggaaaacatt
      181 ttaaccagat tagaaagcga tataccgacg gagttggagg aaggtgtgtt atgggtctca
      241 tcatgtctta ttatggatgg gatggcaaat gtatcactaa tgctgaaaga agattatatg
      301 ctgcattagt cgcattgaga cgggccggta taagtaaaga attactgata gagttgaatg
      361 attccggtgc gacattcgac gatatagctg attatctgga caaaaattgt ggattgacaa
      421 gtaacaacag gtaatcgtcg aactcgtcaa atggcggacc tggattagtg tgaaattttg
      481 atacgattcc aacaaatcta aaattctaga taaagctaaa tatatcttcg attacaacat
      541 acaatatgac agaatctatc gtctgtcgaa ccgagagtgc aaatcccgcc cagtccaaat
      601 aattgtatcg atgcaaatgc ccgctacttt ttatatttaa ttcgaattaa atgttgacca
      661 aaatctacta aaattctcta aataatacaa taaaaagttg accattatgt tgaccatttc
      721 atggttgaca tgagtgctat aattgtatct atggtcaact tattgtagaa tttgttgacc
      781 attgatttgt gatggtcaac attaatatta ttatatgtta actcttagtc tttccctaaa
      841 actttatata aatcttaaaa ttataattac tatattgaga acatctgtcc aaaaaataaa
      901 taataaatta gataataatt caaaatcaaa agaactaaca aaagtaaata aagacaatag
      961 aaaaagttta actgctagag taaaaccaga tgatcttatt gtttttaatc agagattaaa
     1021 gttatttggt tttaatagca ttaatgagtt agtacatgag ttcatagcag gaagatttcc
     1081 tcaaattaca gaagacaagc aaatagataa tttgatagaa aatactaata gaaatggaca
     1141 aagaacaata ttaaaagaag gaaatacagt agatttttat aaaaatgtag accttaatga
     1201 tatatacaat tattatcaaa ttatgagaca attacatcca aatacatgtc gagatctgat
     1261 aagctatttt aaaagattta gagacttatt ttttaatgaa aaggcagaag aattgaggat
     1321 actttctcca cgaatacgtt ctaaaataat ggatgcattt cgaaaatttg gacagtatta
     1381 tctttataaa tacaatgatg atagttgtat tgatcttgta tcaaaaatca taagaagata
     1441 taatttgaat gcaggaaata atgaccacag caaactctac attgtagatg ataattatct
     1501 atctgaaaaa ataaaaacta tatttcaact acaaggagaa attggtctaa tcgtcaaatt
     1561 tgcagtattt acaggtttaa gggaagatga attagtctat acatatagaa aagacatttg
     1621 ttctaatctt ggaggatgtt cttgtgaaaa attacatgta atagagaaac caaatggtac
     1681 ctcaattata ttaattcaat ggtatagagg acacaagaaa tgctacttca caattgcacc
     1741 aactacatta tggaattctt ttcgttgctt gccatttttt gattacaatc ctcacataaa
     1801 atctgcacat tcatatttaa aggctaagga taaagatttg cattttatgt ggttaagaaa
     1861 agcacattat aatataatgt gtagatcaat gaaacccttc gaagcaaaca tactagctgg
     1921 aagagctaaa actgttgatg ccaagcatta tgcaatgtat gaattagata tgatgacaaa
     1981 gagttatact gaagcttgga aaaaatttgg catcactatt tcttaattaa agtgtgctat
     2041 atataaggat aaatatttgt tgtcaaatag tgaatttagt caagatacca atcgatcaaa
     2101 atacttggac ttcaatagtt aaaaattatg aaatgataga aggagcacaa ctttccaata
     2161 gttttataat tttaatggca ttaaatgaat ctaataaacc cttaaattct acagaaattt
     2221 cagaaataat tgctctcaaa acatctggta aaatatttaa agtctcagct acgttaaagg
     2281 attcattaga acacagactt aagcgtggag gatatgttga cagtacagat attccatcaa
     2341 agaaagggac tatgaagcct gtcaaaaaga gcttatattc tatcacacct aagggaagag
     2401 agttattgaa aggttggatc tcttttctta atgcatataa aagtgattaa ggatagaaaa
     2461 aatgaatttt agtcaattat tgatcttgtt gtataaggta aataatttta atattgtaag
     2521 attaagtatc tatcttatta gcatattttt tgtcttatta gaaatttttt taatctcctt
     2581 ttatagtgct taaaattaat tatagataca ttttttcata cgtctagcat tgttagtttt
     2641 tcttaatcga gggttcaaat cccactggcc ccattgaact ctgggttcca atcctatttg
     2701 tagatgaatt catgaagcta taataataga atctaggaat taatctttac ttttgtaatc
     2761 atttatttaa aagatattaa gacaaataga attgtaaaat caaataataa taatcaaaat
     2821 aattttataa agataaaagg attctgtggg atttgaacgc ttctataaag tgggaccagt
     2881 tactttttag aacaaatatt ttcttgattg ttgttcaatt ttttttgatg agcttatttt
     2941 gataatttca tactattact aaattatata ggtaaaagca taattttggt attaataaaa
     3001 tttctattaa tgaatcttaa gattaaatat ttctaaaaaa taggagagta ataaatatta
     3061 tgattaaata aatcaaccta attaatagat atttaattta attggaaact ctttcagtag
     3121 tataaaagat ttattgaatt aataaagaaa tagaaatata tgatttttac attaacatac
     3181 taaccagcta aagggaaagt tagttttgca agataaatat tccattccat catgatcaat
     3241 agtttgtgtc catgttatct gagaacgatt ttgtaaaccg tgatataggc cttgtttcag
     3301 atatactttc aaatatactt gactgtcaga atccaaagta taacgatttg tctttgtaaa
     3361 tttcttatct tcatttaccc ataattctat taaacctttg ttttctgtat caatacattt
     3421 tccatcaaat ctaaaattat tacacttaga ccatattaga tgtaatagaa attcatacca
     3481 ttcacctttg acaaaatttt ctctccacaa attatcaaaa ccattaggat tggcattagt
     3541 atgattcaat acattcagtt caaagacaag tcctccatct tgtggagaat ttttaaaatt
     3601 aaatcctaat ggcactgcat cacaccattg actagtaaca ccagcagggc atggtaaacc
     3661 attaggctct ggcaattgat gccattgtgt aaatatgtgc caagtatttg taatttgtgt
     3721 attctctggg atgcgtgtat accagtgaaa ccacatctct tcgccatcgt caaaaagtat
     3781 aggcttagta aaatcattgg aagaataatg aataacctca gttctagctc cattatttga
     3841 aacatcatca ggatgtacta tgaatttgag tgctttggta ccttctttgg gagagtctgt
     3901 aataacttca aaatgagatc tattaatatc attcttatca aattctgcac cattccaatt
     3961 ccaaaaacta ttgatatctc cttcctcaaa acccagttgt acaccataat gttttagaag
     4021 tatttttgaa atttgatatc ttaaattatc aatagcagaa atagaagata attccgtagt
     4081 attaaaattg atagtagaca ataatgtctt attatactca atagaaatag aggattgatt
     4141 taatgtattt gatgtatttg aagactttac cattccttca acaattatgg gtaaaaataa
     4201 gactagcaaa gaaattggca aaatgtagat attcttatag atagtttcaa aaatcatgta
     4261 ttaaatatat gttattacca attgataaaa ttttttataa taattcctta gtattaagga
     4321 tacttaaaat ttaattaaaa tattttatct gaaatttatg ttattaaaag caatattcaa
     4381 tattttaaag atattgaata tcctatcaaa atatatttct tctcaacaat aaatgacagt
     4441 agctaatatt aaatgggttc agtaatattt tttgactaaa tgtgtatgat ttgaaccatt
     4501 ctataccaac tagcttatgt tttctaattg tcaattttag caagcaaaca gtttctcata
     4561 tccagattga atctttttgt tctaaaatat gtagatattt tatttctgaa atctgtaaat
     4621 gatgaataat actgtagaac aagaagatca ttcttggcta tatgccatac ttcttccagt
     4681 accatgaatt ctggagatgc tgttggaaga tatactggga tcagattctt tttgtgttta
     4741 tcaaaatatt gtagtacctt ttttgatttg tagtgttgtt ttgctttatc cagaaataag
     4801 tagcatttgg gaaattttct atgaatctgt ttcagataat ctaaaaaggt attttcatca
     4861 aaccagttat actgtctgaa taactgttgt tttccttcta gacttgtagt agcaccaaat
     4921 aaaactgact cctgatgaga tccagtaatc ttaacaactg gtctttcatc cttttttatc
     4981 catactttcc tgacaagaga atcataaaag aagaagaatg attcgtctgt agatactact
     5041 gtgaagcctt ctttcttttg ttggagatta tccagtatcc ttcttgctct tttttaaaac
     5101 gttctttctc ttcttttgat gcagtattta catgtgtctt tcgagatacc ttctgtttga
     5161 atccccactt gtgcatgagt ctgtaaatat gggtataatg gtatcttatt ccaccaccac
     5221 tttttcttat aatcagatct tctacctgtt ttgtagtcca ttcttgtttg ctagacgaca
     5281 gttcattttg tatctcgtat actacttctc ttggtatatc tggaggtcta ccactttttg
     5341 gtctgttttt taatccttct attccttctt ctctgtacct ctttaaccag tataatgccc
     5401 atggtctact tctatgtagt tcatcagcag cataggcagg aatgacatta tcatgctcta
     5461 cctttactac aagtagcatt ctttccttta ccttgatact ggtttccttc ctgtataatc
     5521 taatcaattc acttttggag aacttcacag taatgacgtt acacgaaata tacaagatga
     5581 tagatagctt ttactctata tcaggtatga taataataaa atctgattag aaaatatatg
     5641 ctaattggta taacatacat aatagattag aaataggata tctaaagcta tagatttatt
     5701 gttaacttaa cagttttgta aatacattag taagttattt gtgtaaacca acactaatta
     5761 ctttgtttta ttatctatga acaacttcat tcagaagtaa ccaatccaaa gtaatcactt
     5821 ttactttaca ttatatacta ccaaggtaat tacaatgctc ttaac
//
LOCUS       DATIAS010000442         3624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1987840, whole genome shotgun sequence.
ACCESSION   DATIAS010000442 DATIAS010000000
VERSION     DATIAS010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1987840"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /locus_tag="VLA74_08905"
     CDS             <1..596
                     /locus_tag="VLA74_08905"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF50864.1"
                     /translation="YFLGLSLRNTSKALVIFRDEKRSYISIWKWIQRFGSSQIYKRKR
                     VSAFIIDETVIQIGWKHHYVWIAIEPVHKTLLGIHISESRNMLVTEKFISSLVSKYGR
                     HAVYSDGGTWYPEACKVLKLKHYLHSPLEKSIIERVIQYFKDRTECFDDYFPCNSKRR
                     DCDNDHVYNWIELFVSMYNTIRISKNNSIVTKEEVIS"
     gene            1543..2478
                     /locus_tag="VLA74_08910"
     CDS             1543..2478
                     /locus_tag="VLA74_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50865.1"
                     /translation="MKILHLNDQAGVSCVLAKYQNKLGNDAKVIKVSDDKYGIYEYYH
                     NYVQLVRQDEFIEKSLQEAKYYDIIHVHSSFGMIFSLRKKYGTSKKIILHYHGTDIRG
                     SDNFDQRKREYNENLLLTILKIIKNKKINHSSRQRLAQILSDNVLISQKDLSIYVKNA
                     KYIPIPIDLDHFYKNENHNKRKALLFKTERSNIKKTLETITNNFNFSVEVHDRISNPI
                     KYSKMPEFLNQYEMYIDIRFIKELLLEDLSTTSLQSLACGLKVITPQLKILDIFPPQH
                     NPTQIADRLLKLYKQKSSLRIQIISNLLRAYPKNR"
     gene            2560..3295
                     /locus_tag="VLA74_08915"
                     /pseudo
     CDS             2560..3295
                     /locus_tag="VLA74_08915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020489.1"
                     /note="programmed frameshift; internal stop; incomplete;
                     partial in the middle of a contig; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT         1412 a          482 c          539 g         1191 t
ORIGIN      
        1 tatactttct tggtcttagc ctacgaaata cttccaaggc attagtaata tttagagacg
       61 agaaaagaag ttacatatct atctggaaat ggattcaaag atttggatcc tcccagatct
      121 ataaaaggaa aagagtttca gcattcatta tagatgaaac tgttatacag attggttgga
      181 aacaccacta tgtgtggata gcaatagaac ctgtacataa aacattactt ggaatacaca
      241 tttctgagag tagaaatatg cttgttactg aaaaattcat tagctctctt gtatccaaat
      301 atggaagaca tgcagtctat tctgatggtg gtacttggta tccagaggct tgcaaggtat
      361 tgaaattgaa acactatcta cattcaccat tagaaaaaag cattatcgaa agagtaattc
      421 agtatttcaa agatagaaca gaatgttttg atgactattt tccatgtaat agtaaaagaa
      481 gagattgtga taatgatcat gtgtataact ggatagaact atttgtatca atgtacaata
      541 ctattagaat atcaaagaat aattctattg taacaaagga ggaggtaatc tcttaaatta
      601 acagagccat tactactata ctttcttaat ccctctgcaa ttttatgaaa ccgttattgt
      661 aggatatttg gatactattt ccttttccca cttggtccat aagttagaca tatatgcttt
      721 aatatttttt ctaataaact atcttatttt actggatgta gactttgcct gtgattctaa
      781 taactcaaat gtttcatgta caatccttcc atacatagaa gaatattcat aatcatcata
      841 cacaaaagga atatcaaatt cagaagctat ttttgctgct aggatattgt gagcatgaac
      901 tatatcaggt ctaatttctt taataatgtc attaattttt ctttttatta tctgatagta
      961 gaaaggaaat ttatatttgg cttttatatc ccattttatt tcatatattt tgtcaaaaat
     1021 tacattatta taatcaattt tcttttgggc tctaacaaaa taaacataat atcctttttt
     1081 ctgcagtgat tgctaatttc tcaagatgcc aattgggtaa accatattca taaatatgaa
     1141 gtactttcaa atttgagtat tgcaataaaa tataatttat ttcttttgtt aagagtctga
     1201 ttacaatcag ttataattta ttattaattc tgctttgttg cgcaactatg attttcgtca
     1261 attttgatta taaaaatgaa tcttcaatta tatagataat caatattgac aatttgttcc
     1321 tatcaaaatt tgtatcgtat tatcgatttt catagttgcg caacaaagca gctatattca
     1381 ataataatat agtgggtgca acaatgtggt tatttctatt tgaatattta gaaggtaaat
     1441 ttacagagca ggagaaaaat cagatgaaag attaattaag attacagcat gaaaaaaaag
     1501 tattaaaaag tccttattca taaacattca tgtagataat atatgaaaat tttgcattta
     1561 aatgatcaag caggcgtatc atgtgtactt gccaagtatc aaaataagct aggaaatgat
     1621 gccaaagtaa ttaaagttag tgatgacaaa tatggaatat atgaatatta tcataattac
     1681 gtacaattag ttagacaaga tgaatttata gaaaaatctt tgcaagaggc aaagtattat
     1741 gacattattc atgttcacag ttcatttgga atgatttttt ctctgagaaa gaaatatggc
     1801 acctcaaaga agataatatt acattatcat ggaacagata ttagaggatc agataatttt
     1861 gatcagagaa aaagagaata taatgaaaat cttttattaa caatattgaa aattatcaaa
     1921 aataaaaaaa taaatcatag ttcaagacaa agacttgcac aaatactttc tgataatgta
     1981 ctgatatctc aaaaagattt atcaatttat gtaaaaaatg caaaatacat tccgattcca
     2041 attgatttag atcattttta caaaaatgaa aatcataata aaagaaaagc attattattc
     2101 aaaactgaaa gatctaatat aaaaaaaacc ttagaaacaa ttactaataa ttttaatttt
     2161 tcagtagaag tacatgacag aatttctaat ccaattaaat acagcaaaat gccggaattt
     2221 ttgaatcaat atgaaatgta tatagatatt agatttataa aagaacttct tttagaagat
     2281 ctcagtacaa cttcattaca atccttagca tgtggcttaa aggtgataac tccacaatta
     2341 aaaatattgg atatttttcc tcctcaacat aatcctacac aaatagcgga tagattattg
     2401 aaactttata aacaaaaatc tagtttaaga atacaaataa taagcaactt attaagagcc
     2461 tatcccaaaa atagatagaa atatagctcc tcatttttat catctttaat tatattacaa
     2521 ttgaacaaaa gaaaacatca agagcaacaa gttaaaacaa ttacatgcat tccatatgat
     2581 ctatggaatg aaattaaaaa tattttgcca gatgaaaagc cagagaatac aataggtcga
     2641 cccattgttc catataggaa agtacttgat ggtatcctgt ttgttttgag aacaggatgt
     2701 caatggaaaa tgttacccaa agagtatggt tctggttcaa catgtcatag aagattccaa
     2761 gaatggagag aattaggaat tttctataga ctatggtcca tattgctaaa aatatatgat
     2821 tttaaaatag gaataaaatg gaactggcaa tctcttgata gcatatcagt aaaatcgcct
     2881 ttagggggcg atgactggac ataatcctac tgacaggagt aaattaggca gtaaaagaca
     2941 tattcttaca gataaagatg gaattccttt atctgttgtt ataacatctt ccaacactca
     3001 tgatgttact gttgcaattg atacagttga caatatggtt atcaaaagat aatcatcatc
     3061 atccaaacca aagcacaacc agaaaaagaa acaaaatctg tgtcttgata aagcatatca
     3121 ttccaaagaa gtagaacaag aaatcatcga aagaggatac ataccacaca tacgacacag
     3181 aagggaagaa atgaaattca aaaagaaaca ttcagcaaga agatgggttg tagagagaac
     3241 aaattcatgg cataacagat tcaggaaatt atttacaaga tatgaaaaag aaagataaga
     3301 aaactatctt gcgcttgttc agttagcaaa cagtcttatt gtttatagga ggataatttt
     3361 gggataggct ctaattcttg aaagagttcg atcaattagt tttgaataat atactaatgg
     3421 aaagctaatt ataagatttt ttattaaaag actattagta agatacggca gttatctttg
     3481 taaccacgac taattattga aggttaaata tcaaatcgaa tatgtaagat taggaataat
     3541 tcattcgtag taattcatga ttataacaat aaatattagt tttgagtcta aatattttta
     3601 tctaatctga ttaataattt cttg
//
LOCUS       DATIAS010000443         4492 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1713640, whole genome shotgun sequence.
ACCESSION   DATIAS010000443 DATIAS010000000
VERSION     DATIAS010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4492
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1713640"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            359..1564
                     /locus_tag="VLA74_08920"
     CDS             359..1564
                     /locus_tag="VLA74_08920"
                     /inference="COORDINATES: protein motif:HMM:NF020933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA double-strand break repair nuclease NurA"
                     /protein_id="HSF50866.1"
                     /translation="MNRNDATIYNNFSNYPFLHIPASMVEEMLSKTTQIGTELFNSIN
                     TIKKKKNYFRSQLDNSCILKNDSEIKSQKPLTCCAIDGAYAIERLLGTDLIAIGTVGV
                     EGLMSPNQQKGKWESPNHNVFINTEKHDAENMIAARGLMIEMEINLAANSPYNLIFLD
                     GSLTTGLIHMYKAIDFIEKRKTTTANKIRDSYKEFLLSYKIILESSNVEKQWVGIPKY
                     TSRNDIGDIFDWPRDYDDRAILTLILNEGEYTIPRPFTTKENWHMKIPNFYYENNENS
                     KKEHNELESLMNDVLEKISQLHVIYYKPYKWSPALRIEIPYSIAIDNNRLHPLLQTIK
                     NQCIVPSIIEPYPLYLADRIVKHIAPAIPAYKQILTNSLAELEKDNTREDISDIIFIM
                     HSYRTESGM"
     gene            1573..3459
                     /locus_tag="VLA74_08925"
     CDS             1573..3459
                     /locus_tag="VLA74_08925"
                     /inference="COORDINATES: protein motif:HMM:NF014044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
                     /protein_id="HSF50867.1"
                     /translation="MENNANYDSNKYNENYDIKSSCDHKLDQLLSNTEPIGTIGSPSS
                     TSELSLNILHNAVTKKLVGELVIFKYIQDSQSNYSLGQITEIELKNALLEDPTIKSVA
                     RQRGLVNPISGIQDTHVGKLLCSAVFSNNKEENFFDTSLLGTVPPTGTFIHLTNDAIL
                     DSLLEKHLDKLFYLGHVYGSKTKLPMWFKHFGDGSNGAGEAYHLGIFGTTGSGKSTLA
                     KMIFMAYSKYPSMGLLIFDPVGEFSKETIFDATEIYNKQKNNAFYINMKEVLLSLGKK
                     FEVVNIRNLILDRWDLFEEILYESSFFSYLSIKGENKRDAANILINELKSRQHISLTN
                     LVELESFHKVLNILRNPNIQLLIYSTAEPRSRLNTVLSELDEDYIYEKIWKPMCQLFH
                     YRPGAQTVDSLLKKFTFDDKPMIIVDLSLQSAHNMKLDYWNETIQALVLKRLLYGLIY
                     LGEKSWEQNNSLNTLVVLDEAHRFARREKYENSNDLENVRLALLDAVRTTRKYGLGWM
                     FISTSLSSIHKDILQQLRIFFCGFGLSLGSDLVTMKELVSDQNAIKLYQSFTDPANSF
                     NTKSKKYSFMSQGPVSPLSFAGTPLFLNVFNLSESFIKENKLLSYNQMSKNNLSYTQD
                     SYDF"
     gene            3465..>4492
                     /locus_tag="VLA74_08930"
     CDS             3465..>4492
                     /locus_tag="VLA74_08930"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF50868.1"
                     /translation="MITYLPNKGDRFILKIIHISDTHLGKRPKRTRPSIINQEIKPIE
                     DDFYNVWKTFVDEIITDSNLKPDIILHSGDFFDTPSANDPNPPPELARKVVAETFRTL
                     HHNKIPIVLIDGNHGRYTQYRISTLSEYPILFDNVHLFTYFDIRDSIRDKKPLFKDFQ
                     ELNLRIHAHPSIESNDMSQLFTKYKEWILIQNNNIDPNMINVGLAHGMIENNTLHSDF
                     LMANYDYVALGDNHKMQQVTDTAWYSGSTELWSFGEQSYDKGYLIININSNEHKLKIN
                     PKFFKRQRKIVVEEVKILENDTNIQIIERVKDIFKQHDLNVGYNYFTAARVKISLKGN
                     KNYGSSFHL"
BASE COUNT         1757 a          653 c          666 g         1416 t
ORIGIN      
        1 aatagacata ttttttatga gccattaaaa attcaagtta ctacagttat ctattaacct
       61 aaaaaatata catactatat ctatttcata ttgtttttaa tgctcaatgt tagacggaat
      121 taggaagttc tgtatattta aaattaataa ttaatagttc attctataga aataaacaca
      181 ttttatacaa gtctagaatc tctggaaaaa ttttaatata ataaaaaata atagtaatat
      241 atgtctaata tatatgtcta gtataaagta caatacataa attcaatgga tagatctttc
      301 ttttaaaaaa accaatcatt aaaattaaat aaaaacaata acattttcga tataatttat
      361 gaatagaaac gatgcaacaa tttacaataa ttttagtaat tatccatttt tacatattcc
      421 cgcctcgatg gttgaagaaa tgttatccaa aactacacag attggaaccg aattatttaa
      481 ttcaatcaat actattaaaa agaaaaaaaa ttactttcgt tcccaattag ataactcctg
      541 tatattaaaa aatgattctg aaataaaatc tcaaaaacct ttgacgtgtt gtgcgataga
      601 tggagcttat gccatagaaa gacttctcgg aactgatctt attgctatag gaactgtagg
      661 tgtagaaggt ctaatgtctc cgaatcagca aaagggaaaa tgggaatcgc caaatcataa
      721 cgtgtttatc aatactgaaa aacatgatgc tgaaaatatg attgctgcaa gaggtctaat
      781 gattgaaatg gagataaatt tagcagccaa ttcaccatat aatctaattt tcttggacgg
      841 atcacttaca actggcctta tacatatgta taaagcgatt gatttcatag aaaaacgaaa
      901 aacaactacc gccaataaaa tcagagattc atataaagaa tttctactct cttacaagat
      961 aattttagaa tcgagtaatg tagaaaaaca atgggtagga ataccaaaat atacttcacg
     1021 aaatgacatt ggagatattt ttgattggcc cagagactat gatgatcgcg ccattttaac
     1081 tttgatatta aacgagggag aatacacaat accaagacca ttcacaacca aagaaaattg
     1141 gcatatgaaa attccaaatt tttattatga aaataatgaa aattctaaaa aggagcataa
     1201 cgagctcgaa agcttaatga atgatgtgct tgaaaaaatt tcacaacttc atgttatata
     1261 ttataaacca tacaaatggt cgccagcttt gaggatagaa attccatatt cgatagctat
     1321 tgataacaat agactacatc cattacttca aacaataaaa aatcaatgta tcgttccatc
     1381 aataatagag ccatatcctc tctatcttgc agatcggata gttaagcata tagcaccagc
     1441 cattcctgca tataaacaaa ttctaacaaa tagtttagca gaacttgaaa aagacaatac
     1501 tagagaagat atctctgata tcatttttat aatgcattcg tatagaacag aaagtgggat
     1561 gtaaaaaaga atatggaaaa taatgcaaat tatgattcca acaaatataa tgaaaactat
     1621 gatataaaat caagttgtga tcataaacta gaccaattac tgtcaaatac cgaacctata
     1681 ggtacgatag gctcaccatc atctacaagt gaattaagtc taaatatttt acataatgca
     1741 gtaactaaaa aattagttgg cgaattagta atttttaaat acatacagga ttcacaatcc
     1801 aattattcct taggacaaat caccgaaata gagcttaaaa atgcactgtt agaagatcca
     1861 acaataaaat ctgttgcacg acaaagaggc ctagttaatc ctataagtgg tattcaagat
     1921 acacatgtag gaaaactgct gtgtagtgca gtatttagta ataataaaga ggaaaatttt
     1981 tttgatacta gtttattagg aactgtacct cctacaggaa cattcattca tttaacaaac
     2041 gatgccattt tagattccct attagaaaaa catttggata aattatttta tcttggacat
     2101 gtttatggat caaaaaccaa gttacctatg tggttcaaac attttggtga tggttccaat
     2161 ggagctggtg aagcatatca tttaggaata tttggtacaa caggttctgg aaaatcaaca
     2221 ttagctaaaa tgatttttat ggcctattct aaatatccct caatgggatt attgatattt
     2281 gatccagtag gagagttttc gaaagaaaca atctttgatg caactgaaat ctataataag
     2341 caaaaaaata atgcatttta tataaatatg aaagaagttt tattatcttt aggtaaaaaa
     2401 tttgaagtag ttaatattag aaatctaata ttagataggt gggatctttt tgaagaaatt
     2461 ctatatgaat catcattctt ttcatattta tcaataaagg gagaaaataa aagagatgca
     2521 gcaaatattt taattaatga attgaaaagt agacaacata taagtctaac caatctagta
     2581 gaactagaat catttcacaa agtacttaat attttgcgta atccaaacat tcaattacta
     2641 atctattcta cagcagaacc acggtcaagg ttaaacactg ttctttctga attagatgag
     2701 gattatattt acgaaaaaat ttggaaacct atgtgtcaat tatttcatta tagacctggt
     2761 gcacaaactg tagactcctt gctaaagaaa tttacttttg atgacaaacc tatgatcata
     2821 gttgatctct ctttacaaag cgctcataac atgaaattag attactggaa tgaaactata
     2881 caagctctag ttctaaagag acttctttat ggcttaatct atttgggaga aaaaagttgg
     2941 gaacaaaata attctttaaa tactttagtt gtattggatg aagcacatag attcgcaagg
     3001 agagaaaaat atgaaaactc caacgattta gaaaatgtaa gattagcatt attagatgcc
     3061 gtaaggacta ctagaaaata tggactcggc tggatgttta ttagtacttc tttatcaagt
     3121 atccacaaag acatattgca acaattaaga atattttttt gtgggtttgg attgtcttta
     3181 ggaagtgatc tagtaactat gaaagagttg gtatcagacc agaatgccat caaattatat
     3241 caatccttta ctgatcctgc aaactcattt aataccaagt ctaaaaaata ttcctttatg
     3301 agtcagggtc cagtttcacc actttcattt gctggaaccc cattattttt aaatgtcttt
     3361 aatctatctg aaagttttat caaagaaaat aaactattgt catacaatca aatgtcaaaa
     3421 aacaatctct cttatactca agatagttat gatttttgaa ttgaatgatt acttatttac
     3481 caaataaggg tgataggttt attctaaaga ttattcatat ttctgacact catcttggta
     3541 aaagaccaaa aagaacaaga ccttctataa ttaatcaaga aataaagcca atcgaagatg
     3601 atttctataa tgtctggaag acattcgtag atgaaattat aactgatagt aatctaaaac
     3661 cagatattat tttacatagt ggagattttt ttgatactcc ttcagctaat gatcccaatc
     3721 caccaccgga gcttgctagg aaagttgttg cagagacgtt tagaacatta catcacaata
     3781 agatacctat agtgcttatc gacggaaatc atggaagata tacacaatac cgaatttcta
     3841 cattgagtga atatccaatt ctctttgata atgttcacct atttacctat tttgatataa
     3901 gagatagtat tagagacaag aaacctttgt tcaaagactt ccaagaactt aacttaagaa
     3961 ttcacgccca tccatcaatt gaatctaatg atatgtccca attatttaca aaatacaaag
     4021 aatggatttt aattcaaaat aataacattg atcctaatat gataaatgtt ggattagctc
     4081 atggaatgat agaaaataat acgttacata gcgatttttt aatggcaaac tatgattatg
     4141 tagctcttgg agataaccat aaaatgcaac aagtaactga tacagcatgg tattctggtt
     4201 ccaccgagct atggagcttt ggggaacaaa gttatgataa aggctattta ataataaata
     4261 taaattctaa tgaacataaa ttaaaaataa atccaaaatt ttttaaacgt caaagaaaaa
     4321 tagttgtaga agaagtaaaa atattagaaa atgatactaa tatacagatc atagaaagag
     4381 ttaaggatat ttttaaacaa catgatttga atgttggata caattatttt acggccgcga
     4441 gagttaaaat cagcttaaaa ggtaacaaaa attatggatc ttcctttcat ct
//
LOCUS       DATIAS010000444         3575 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_352809, whole genome shotgun sequence.
ACCESSION   DATIAS010000444 DATIAS010000000
VERSION     DATIAS010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352809"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VLA74_08935"
     CDS             <1..1039
                     /locus_tag="VLA74_08935"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSF50869.1"
                     /translation="AILISSELLQDADFSFDTAKSIRMKLLEFYTFSQQQLQQIFFNS
                     NFDNKFSNPIDSSLDEFLYHSIISKKEKLLELEDRWLISKLQRLINNVTKSLETLRVR
                     EALHNILYVFDQDIHWYKKRINAKKRDNNDIVNNILILCFSIRIKLLSPFAPFISEEI
                     WNSLSNITSIVSSKWPDSIFNDQIDPLSEESEEYLKRLTSDISNIIKVTKKLPNNIYI
                     YCSSTSKQKIYQKILKIITLNNERNFGNIMKKLIEDPETSYAKKDPSFVKKIVEDILS
                     ESVESRINRLNLNSFDEISIIKDSQNLISKEIEVENVQIVIYSEEEKEKFDPKSKSKF
                     SRPYKPAIYLE"
     gene            complement(1027..1248)
                     /locus_tag="VLA74_08940"
     CDS             complement(1027..1248)
                     /locus_tag="VLA74_08940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50870.1"
                     /translation="MKKKKEMPAAARTGIAILVLGAILLGIGYYQEREALSLYGLIMS
                     ICGFSLYMISSIYISRTSDNKEKKGSYSK"
     gene            1312..2340
                     /locus_tag="VLA74_08945"
     CDS             1312..2340
                     /locus_tag="VLA74_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSF50871.1"
                     /translation="MKIAVVGIGVAGAYLMNQLSDNHDIHVVGFERMKEEEHDAVCAW
                     ATSKNVMVDYTRKCGLDFDDYILHDGKKMSVDLGDSKHVDIGLRGMVSYDKLKLIQDM
                     IKGTGINYGKAPKKDNLESDFDLIIDSTGFHRNYLPKLDYEMWIPCVQYKVKYNSNND
                     IPYDDFYLKGFPSMSGYFWYFPLGNGYAHIGAGDFTRKNHNLFVEHFLKKYKCEIIKK
                     NGRPVRISPPLKSEPFSDGRKSIGVGESIGTVYPLLGEGIIPSTICADLFVNNLNDFK
                     TYRKQVLKHFAIYPLVFKFILMKITGTFNLVKNSLDLLRIYHHMKNNQHRYGMEVKIA
                     DMMKVSSI"
     gene            2427..2867
                     /gene="pfdA"
                     /locus_tag="VLA74_08950"
     CDS             2427..2867
                     /gene="pfdA"
                     /locus_tag="VLA74_08950"
                     /inference="COORDINATES: protein motif:HMM:TIGR00293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit alpha"
                     /protein_id="HSF50872.1"
                     /translation="MSKANTPQKSAIEQRINELVQHSRTLELYLNEVLERETTVTKLI
                     EEARLASYALQNISLDKENEALMPIGVGVYLKTNIPSIDKLLVNVGAGVAIEKTREDT
                     LNYIESRIKEFEIGLNQLRDQKKQITSQLEQIQQQVNSMLHQAS"
     gene            2944..>3575
                     /locus_tag="VLA74_08955"
     CDS             2944..>3575
                     /locus_tag="VLA74_08955"
                     /inference="COORDINATES: protein motif:HMM:NF012662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HSF50873.1"
                     /translation="MFDKLKKAFSNIISDISKKEITEKDLENTLFDLEIALLESDVAQ
                     EVIDDISANLKNKLLGLSLEKDKTPKELIQLHVKKSIYEILTKSGTLDLVNEINSKKE
                     NKGGPFVVVFLGINGTGKTTTVAKVANLLHKNGLSVVLAASDTHRAGAIEQLGEHARR
                     LSLKMIHQRYGADPSAVARDAVEYGKKHRVDAILIDTAGRMQTAKNLMDE"
BASE COUNT         1375 a          451 c          547 g         1202 t
ORIGIN      
        1 agcaatattg atttcatctg agcttcttca ggatgccgat ttttcttttg atactgcaaa
       61 atctattaga atgaagttac tagaatttta tactttctcg caacaacaat tacaacaaat
      121 ttttttcaat tctaattttg ataataaatt ttcaaatcct atagattcat ccctggatga
      181 attcctttat cattctatta tatctaaaaa agaaaaactt cttgaactag aggatagatg
      241 gttaataagt aaattacaaa gactaataaa taatgttacc aaatctcttg aaacattaag
      301 agtacgagaa gctcttcata atattttgta tgtttttgat caagatattc attggtataa
      361 aaaaagaatt aatgctaaaa aaagagataa taatgatata gtaaataata tactaattct
      421 ttgtttttct attagaataa agttattatc tccatttgct ccatttatat ctgaggagat
      481 ttggaatagt ttaagtaata taacttcaat tgtttcttca aaatggcctg atagtatatt
      541 taatgatcaa attgatcctt tatctgaaga atcagaagaa tatttaaaga gattaacatc
      601 tgatatatct aatattatta aagtaactaa aaagttacca aataatatat acatatattg
      661 ttcttctact agtaaacaaa aaatttatca aaaaattctt aaaataataa ctctaaataa
      721 cgaaagaaat tttgggaata taatgaaaaa attaatagaa gatcctgaaa cttcttatgc
      781 aaaaaaagat ccttcttttg ttaaaaaaat tgtagaagat attctttctg aatctgttga
      841 atcaagaatt aatagattaa atttaaattc atttgatgaa atttctataa taaaagattc
      901 gcagaatcta atatctaaag aaattgaagt tgaaaatgtt caaatagtta tttattcaga
      961 agaggaaaaa gaaaaatttg atccaaagtc aaagtctaaa ttttcaagac catataaacc
     1021 agctatttat ttagaataag atcctttttt ttctttatta tcacttgttc ttgagatata
     1081 aatcgatgaa atcatataca agctaaatcc acaaattgac attatcaatc catataaaga
     1141 aagtgcttct cgttcttgat aatatcctat accaagaagt atcgctccta ataccaaaat
     1201 agctatacct gttcttgcag cagctggcat ttcttttttc tttttcacta gtgctatatg
     1261 tttaattttt tctcaatata tttttatttt cggatgatga atcttgtata gatgaaaatt
     1321 gctgtggtag gaattggggt tgctggtgca tatcttatga atcaacttag tgataatcat
     1381 gatattcatg tagttggttt tgaaaggatg aaagaagaag aacatgatgc tgtttgtgct
     1441 tgggctacaa gcaaaaatgt tatggtagat tacacaagaa aatgtggtct agattttgat
     1501 gattatattt tgcatgatgg taaaaaaatg agtgtagacc ttggagatag taagcatgtt
     1561 gatattggat taagaggcat ggttagttat gataaactaa aacttattca agatatgata
     1621 aaaggaacag gaataaacta tggaaaagca ccgaaaaagg ataatctaga atctgacttt
     1681 gatttaatta tagattctac tggatttcac agaaattacc ttcctaaact tgattatgaa
     1741 atgtggatcc cttgtgttca gtataaagtc aaatataata gtaataatga tattccatat
     1801 gatgattttt atcttaaagg atttccttcc atgtctggct atttctggta ttttccttta
     1861 ggaaatggat atgcacatat aggtgctgga gattttacaa gaaaaaatca taatcttttt
     1921 gttgaacatt ttcttaaaaa atacaaatgt gaaataatta aaaaaaatgg aagacctgta
     1981 agaattagtc caccattgaa atcagaacca ttttccgatg gtagaaaatc cataggtgtt
     2041 ggagaatcaa taggtactgt ttatccatta cttggtgaag gcatcatccc ttcaacaatt
     2101 tgtgctgatc tctttgtaaa taatctaaat gattttaaga catatagaaa acaagttctt
     2161 aaacattttg ctatataccc attagtcttc aagtttattt tgatgaaaat tacaggtact
     2221 tttaacctag taaaaaattc tcttgattta cttcgaatat atcatcatat gaaaaataat
     2281 caacatcgat atggaatgga agtaaagatc gctgatatga tgaaagtctc ttctatttag
     2341 ctataagatt tgaagttcag atatttttat ctttcttctt ttgagtgagt cacagttata
     2401 aatggattta aaatatttta atacagatga gcaaagctaa taccccacaa aaatcagcca
     2461 ttgaacaaag aatcaatgaa cttgttcagc attctagaac actagaactt tatctcaatg
     2521 aagtattaga aagagaaact acagttacaa aattaattga agaagctcgt cttgcatcat
     2581 atgctcttca gaatatttct ctggataaag agaatgaggc attaatgcca attggagtag
     2641 gagtatattt aaaaacaaat attccttcaa ttgataaatt attggttaat gttggtgcag
     2701 gagttgcaat agaaaaaaca cgtgaagata ctttaaatta tatagaatca agaatcaagg
     2761 aatttgagat tggactaaat caattaagag atcagaaaaa acaaataact tcccaacttg
     2821 aacagattca acaacaggta aattctatgt tgcatcaagc ttcataatat gataattaat
     2881 caaagcaaaa aagaaaatat aatacactga gaattgaatt attatttttg tgtatgagta
     2941 tatatgtttg ataaattaaa aaaagctttt tcaaatatta tttccgatat cagtaaaaaa
     3001 gaaattactg aaaaagatct tgaaaatact ctatttgatc ttgaaattgc attgctagaa
     3061 agtgatgtag cacaagaagt tatagatgat atctctgcta atttaaaaaa taaactattg
     3121 ggtttgtctc ttgaaaaaga taaaacacca aaagaattaa ttcaattaca tgttaaaaaa
     3181 tctatttatg aaattcttac taaatcaggg actctagact tggttaatga aattaactcc
     3241 aaaaaagaaa ataaaggagg tccttttgta gtagtttttc taggaattaa cggaactgga
     3301 aaaaccacta ctgtagctaa agttgctaat cttttacata aaaatggatt gtctgttgta
     3361 ttagcagcaa gtgatactca tagagcaggc gctatagagc aattaggtga gcatgcaaga
     3421 agactatcat tgaaaatgat tcatcaaagg tatggggcgg atccatctgc agttgcaaga
     3481 gatgcagttg aatatggaaa aaaacacaga gtagatgcaa ttttaatcga tactgctgga
     3541 agaatgcaaa ctgcaaaaaa tctcatggat gaaat
//
LOCUS       DATIAS010000445         3009 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1851398, whole genome shotgun sequence.
ACCESSION   DATIAS010000445 DATIAS010000000
VERSION     DATIAS010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1851398"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..581
                     /locus_tag="VLA74_08960"
     CDS             243..581
                     /locus_tag="VLA74_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50874.1"
                     /translation="MEIYLEVNISLELLRGHVWKMMKKDKNIVGSLDSRSSTLGSQAN
                     HSENKVIDIEAISIPSNIIDIQDNNIICEANGCYKQATNEIKLDVGQFGKLSLFLCRN
                     CVPKFKVSEE"
     gene            583..1650
                     /locus_tag="VLA74_08965"
     CDS             583..1650
                     /locus_tag="VLA74_08965"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HSF50875.1"
                     /translation="MINADQLKSTYDYALAYTAKGFSVISLTPKSKQPSIPSWKPFTV
                     SKASKDQLESWFVNTDNNIGIITGKISSIFVIDIDGQEAYNFFIQKIESLSSGDKQLV
                     QSIKDTMKIKTGSGSTNLIFRFDPEEFSIGYELANTILWKDSSNQNSHSEIRLKGEGS
                     YVVPPPSIHPDNNNGYTLVNGINPIALTREQINKLIDAFKKNSNKNYTSTLFQNKSQN
                     NEKIEELKEIDEETVYEVVSKVQSYYYEGIRNDFVLYFSGWLRKLGLSYNNAEKIINE
                     LAIDDEERKSRIKTLKETYQKQDLDQVAGYSGLLELLSNEFSSNSSRNDAIEKLKENN
                     MLELLSQEMDLAQRKKEMMKE"
     gene            1677..2093
                     /locus_tag="VLA74_08970"
     CDS             1677..2093
                     /locus_tag="VLA74_08970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50876.1"
                     /translation="MSEKKISQHLQDLIDAANNSVGTLKEQILEIYHQAVKEGFTPHQ
                     AKLLIKERVLAKAAPSYIYKVLPEESKRAYISQQKNKNLENISNSERDHFLENLQESN
                     QKEVKNSKSLIGDNLENSQEDEQNVVNITDSFRFMM"
     gene            2434..2652
                     /locus_tag="VLA74_08975"
     CDS             2434..2652
                     /locus_tag="VLA74_08975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50877.1"
                     /translation="MKPYSLPEFNQIIIYFDQSITSDKYSLLRFIIIIIYYYYSAITS
                     TKNNKGYPREIPWRDHILLGVIRNEERI"
     gene            2636..2989
                     /locus_tag="VLA74_08980"
     CDS             2636..2989
                     /locus_tag="VLA74_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50878.1"
                     /translation="MKKEYSIDLHIRIPISLDQRIETYYNTLKKRTKTDAIKELLEIG
                     LFTYENWSQIKKEPNKLEELYKQMKEGELVDSIQGMDPREFEIMFDIFKTEHKARYGS
                     KAANPIYSIEKEEGD"
BASE COUNT         1239 a          413 c          499 g          858 t
ORIGIN      
        1 ataaacagtt aatttttgat aatgagaaaa tatttcaaat atttggatag cgactggacc
       61 tagtctgtct ttctttttat tagactcttt tatttgtgat atatacccat ttacctccat
      121 atgggtatac cattcctata tacctattaa tatcttctgc aaatttacaa acatgcaaaa
      181 agagaaaaag cctgtaggaa tatcttttcc tatagatatt ttaagaaaaa tagacgaaga
      241 gcgtggagat atatctcgaa gtaaatatct cattagaatt attgagaggt catgtttgga
      301 aaatgatgaa aaaagataaa aatatagtag gttcgcttga ttccagaagt tccaccctcg
      361 gatctcaagc gaaccattct gaaaataagg tgatagacat agaagctata tctataccca
      421 gtaatattat agatatacaa gataataata ttatctgtga agctaatgga tgttataaac
      481 aggcaacaaa tgaaattaaa ttagatgtag gacaatttgg taagctttca ttatttcttt
      541 gtaggaactg tgttccaaaa tttaaggtaa gtgaagaata aaatgatcaa tgcagatcaa
      601 ttaaaatcaa catatgatta tgcattagct tatactgcta agggatttag tgttatatct
      661 ctcacgccaa aaagtaaaca gccttctatt cctagttgga aaccatttac agtatcaaaa
      721 gcttcaaaag atcaattaga aagttggttt gtaaatacag acaataacat agggataata
      781 accggaaaga tatcctctat ttttgtcata gatattgatg gtcaagaggc atacaacttt
      841 tttattcaaa aaatagaatc attgtcatca ggcgataaac aactagtaca atccattaaa
      901 gacacaatga aaataaaaac aggttctggc agtactaatt taatttttcg atttgatcct
      961 gaagagtttt ctattggtta tgaactagct aatactatat tatggaaaga ttcttctaat
     1021 caaaatagtc atagtgaaat taggttaaaa ggggaaggca gttatgttgt acctccacca
     1081 tctatacatc cagacaataa taatggctat actttagtaa atggaatcaa tccaattgcc
     1141 cttacaagag aacaaattaa caaacttata gatgcattta aaaaaaatag caataaaaat
     1201 tatacttcta ctcttttcca aaacaaatca cagaataatg aaaagataga agagcttaag
     1261 gaaattgatg aagaaacagt gtatgaagta gtatctaaag tccaatctta ttactatgag
     1321 ggaataagaa atgattttgt tctatatttt tctggatggc taaggaaatt aggtctaagc
     1381 tataataatg cagaaaagat aattaatgaa cttgcaatag atgatgaaga aagaaaaagc
     1441 agaataaaga cattaaaaga aacatatcaa aaacaagatt tagatcaggt tgcaggttat
     1501 tcaggtttat tagaattatt atcaaatgaa ttcagtagta atagcagtcg taatgatgca
     1561 attgaaaagt taaaagaaaa caatatgctt gagcttttgt ctcaggaaat ggatttagca
     1621 caaagaaaga aggagatgat gaaagaatga tttcaagcag tgaaagtaat atcgagatga
     1681 gtgagaaaaa aatatctcaa catttacaag atttaattga tgcggcaaat aatagcgttg
     1741 gaacccttaa agaacaaatt ctggaaatct atcatcaagc agtaaaagag ggttttacac
     1801 cacatcaagc taaactctta attaaagaaa gagttcttgc taaagcagct cctagttata
     1861 tttataaggt attaccagag gaatcaaaaa gagcatatat ttcacaacaa aagaacaaaa
     1921 atcttgaaaa tatttcaaat agtgaacgtg atcacttttt agaaaatttg caagaaagta
     1981 accaaaaaga ggtaaaaaat tcaaaaagtc tcattggaga caatttagaa aattctcaag
     2041 aagatgagca aaatgttgta aatattacag attcattcag gttcatgatg tagaaagtat
     2101 aggagaagaa gaaaaagact tacctgaacg agaacaccaa cttccacgac aagaagatga
     2161 ccatgcaaag agtgaagatc aagtattagt cacaattgaa atccaaaaac taagaataga
     2221 gctcaacgaa gcgagacata taataaatca acaagtagag aaaatcgagc aattaagtat
     2281 caagcaggta aagacttttg gacataaatt cacatttgaa ttcgattttg aagcacccaa
     2341 tgggacaata ttcccagtac tagtcactgt ttttccagac aaagaaactg gctgggttat
     2401 cttcgacaaa aaaagagctg ccaatcaata aaaatgaaac catacagtct accagaattt
     2461 aatcaaataa taatttattt tgatcaatca ataacaagtg ataaatacag tttattaaga
     2521 ttcataataa taataatata ttattattat tctgctatta ctagtactaa aaataataag
     2581 ggatatccca gggagatccc atggagggat cacatattac tgggagttat tagaaatgaa
     2641 gaaagaatat agtatagatc ttcacattcg aattcctatt agtttagacc aacggataga
     2701 aacatattat aataccttga aaaagagaac aaaaacagat gctatcaaag aactattaga
     2761 aattggactc tttacctatg aaaactggtc tcaaattaaa aaagaaccca ataaactaga
     2821 agaactttat aaacaaatga aagaaggaga attagtagac tctatacaag gtatggatcc
     2881 tcgagaattc gaaataatgt tcgatatctt taaaactgaa cataaggcta ggtatggttc
     2941 taaggcagct aatcccattt attcaataga aaaagaagaa ggtgactaat ggctcatgtc
     3001 ttggattat
//
LOCUS       DATIAS010000446         6621 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1577416, whole genome shotgun sequence.
ACCESSION   DATIAS010000446 DATIAS010000000
VERSION     DATIAS010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6621
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577416"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..810
                     /locus_tag="VLA74_08985"
     CDS             328..810
                     /locus_tag="VLA74_08985"
                     /inference="COORDINATES: protein motif:HMM:NF003140.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HSF50879.1"
                     /translation="MSSADYKHIVRIAGKDIEGEKKIIVALSRVKGIGYNFAQVLLQK
                     LNINPYIRVGFLTDRELGNIEMALKDPNKTGIPHFYFNRRKDMETGSNVHIITSDLDF
                     IVSNDIEREKTVMSWRGYRHMFGLRVRGQHTRTTGRRGTAVGVRKSAQAAQKVQKSGE
                     "
     gene            810..1322
                     /locus_tag="VLA74_08990"
     CDS             810..1322
                     /locus_tag="VLA74_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020265811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HSF50880.1"
                     /translation="MGDPKKSRKTFKRPRQIWTKDQLSSELYLLGTYGLRSKRELWKA
                     QTKIAGIRNQARALLALTTESRHEKENKLLTYLQRLGLVGESATLDDILNIKIEDILE
                     RRLQTIVMKKAITKSPHQARQLVVHGHVSIGDRTINIPGYPVKMEEESKIILHNEFMN
                     IVHATSQSPG"
     gene            complement(1330..2289)
                     /locus_tag="VLA74_08995"
     CDS             complement(1330..2289)
                     /locus_tag="VLA74_08995"
                     /inference="COORDINATES: protein motif:HMM:NF016980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50881.1"
                     /translation="MKKKTIIYERNGNTISKKILLFENTKDMRILSNQVAWKIIELLS
                     KRSMYPAQIAKELKLYEQTTYYYVRKLVEIGAIEQTGTSQIRGGTARLYSITSSSFGL
                     ELDSVEEIEQTDIHQSTKKMTQKNIPFWLEDYYKDNAFCGLIVVGAPDPHGPYKSSAR
                     DGHYAIHLSFYLGTLCDLSSNFIAKLDVDAKAEKDIDNRNLILIGGPGTNIVTSEFND
                     HLPIKFNETNYWSGLTDNAGRIYNMDNHGLIAKIKNPYNQDRSIIVLAGVRSIGTKAA
                     VIALTDHGDKLMKRYLHDDDWAVVVQGFDMNADGKIDHVDIVS"
     gene            2461..4227
                     /gene="glmS"
                     /locus_tag="VLA74_09000"
     CDS             2461..4227
                     /gene="glmS"
                     /locus_tag="VLA74_09000"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSF50882.1"
                     /translation="MCSIIGYIGKSSAASVLVDSLKRMEYRGYDSVGIATLESSKIFV
                     RKDVGKVIEVEKSLRLGSMPGQVGVGHTRWATHGGISQINAHPHTDCENQIVVVHNGI
                     IENYKQIKEELLANGHIFQSQTDSEVIAHLIEFHYKKEHDIKQAIIETCKILKGSYAF
                     VAIFRSGLVAGTRLDEPLIVGLGKDGNFISSDVLGFLEYTDKSIFLDNQDIVILDGQN
                     VNIFDFNGNAVSRPVTQVAWELGDIDKGKYAHYTIKEIHEQQNSILKAFGTKKEIITK
                     FVDIMSESKNVFITGSGTSFHSALLAKYLLNKFSNIRTEIVMSSEFEYMLGPLDENSV
                     LIAISQSGETADVLHSVKMARQKHAKILSIVNVSTSSLARLSDHFIAINCGPEIGVAA
                     TKSFTGQLAILYSIVEKLCPDKIDINEFMNTFNDSMKNILSLEPHIESIAEKIKSSQD
                     IYILGKSLHYPIALEGSLKIKELAYIHAEGIAAGEIKHGPLALVETNTIVIVINPCDD
                     TFTNTLNSVYEMKSRGAKIIGISNQNNDNYDYFIRLPTIDELMYPILEIIPLQILSYY
                     LALKKDANPDYPRNLAKSVTVR"
     gene            complement(4304..5413)
                     /locus_tag="VLA74_09005"
     CDS             complement(4304..5413)
                     /locus_tag="VLA74_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00303 family protein"
                     /protein_id="HSF50883.1"
                     /translation="MVKLFEDITLVNNKFNINDIKIINPIFVCVISHTETSKIQGLTV
                     AGANPNLIKFTPPADAEFLYYGKCICIKGVPATPDGKPTPAIITRTSLNIAGIPFIVV
                     DAGVKIKPAIPFFSFDLKHGNNITEEIAMSLEDVKKAYLYGKLLGEQLAKNNDLVILG
                     ESIPSGTTTALGVMLSLGIDGAYKISSSMPNNPHELKNKIITSSMERNKIKFGEFKEQ
                     PFNAVSYLGDPMIPSIAGIATGALENGCRVMLAGGTQMCAILTLLKRLEIKTNKIIIG
                     TTNYILDDLQSDFENLVYSIDREIGILAVDLHMKESNKQGLRAFAEGFVKEGVGAGGT
                     SITAIIKTKGRVNSWTLLRNIEKEYESKIEENIVI"
     gene            complement(5417..6043)
                     /locus_tag="VLA74_09010"
     CDS             complement(5417..6043)
                     /locus_tag="VLA74_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF50884.1"
                     /translation="MTLKIEQIQVGQMANFTYLIIDEEEKEIAIIDPSWDLDKIFEII
                     KRNSYRVKFIINTHTHFDHILGNEQVLAITNCQIVQHENSMDRHDIAVKDGDRIRVGN
                     IVIDILHTPGHSKDSICLIVDSKIIFTGDTLFVGNCGRIDLPGGNVNEMYDSLLRRII
                     KLNDELIVYPGHNYGMKTVSTIGEEKNTNYVLAPRTLQEFIQFMTGEE"
     gene            complement(6045..>6621)
                     /locus_tag="VLA74_09015"
     CDS             complement(6045..>6621)
                     /locus_tag="VLA74_09015"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HSF50885.1"
                     /translation="GYGIAELILKKFKKIDDLKITVICGTGNNGGDAMVASRHLSIHS
                     RKPIKLIVLGDLNKIKTEEALTNFEIIKKMHKTIKIYYKLDTQIKNEILASDIIIDGI
                     FGTGIKGDIKEPQSLIIDLINKSKAHVISVDIPSGLDPDTGNINSNCVKADSTITFHR
                     IKNGLLHNKKYTGTIYLKKIGIPMEVEGGII"
BASE COUNT         2167 a         1054 c         1059 g         2341 t
ORIGIN      
        1 ataatcaatg attctcgatt gccaattcaa gtaattcaag ataactctcg tagtttgttt
       61 tctcatcata cagattgtat tcagtttttc cacaattgtt ttcagccatt ttaaataata
      121 tctttaaaaa aatgtaatat aatggttatt ataactagat ccgcttgcaa ttttataatt
      181 attatatatt ctataataat attttgaaat atatctattt tggttgttta aagtgaccta
      241 ttaaatgtaa tttttatatt ttattttttc cggttcttgt ctagtatgat ttttatttag
      301 gatcctaaat ttacttttta gttagaattg tcatcagcag actataaaca tattgttaga
      361 attgcaggaa aagatataga aggagagaaa aaaataattg ttgccctgag cagggtaaag
      421 ggaataggtt ataattttgc ccaagtattg cttcaaaaat taaatattaa tccatatatt
      481 cgcgttgggt ttcttacaga tagagaacta ggaaatattg aaatggcgct aaaggatccc
      541 aataaaactg gaataccgca tttttatttc aatagaagaa aggatatgga aaccggttct
      601 aatgtgcata taattacatc agatttagat tttatagtat ccaatgatat tgaacgtgag
      661 aaaacagtaa tgagttggag gggatataga catatgtttg gtttgagagt aaggggacaa
      721 catacaagaa cgacaggtcg aagaggaact gcagtaggtg ttcgtaagag tgctcaggct
      781 gctcaaaaag tacagaagag tggtgaataa tgggagatcc gaagaaatct agaaaaacct
      841 ttaaaagacc acgacagatt tggacaaaag atcaattaag ttcagaatta tatttgttag
      901 gaacgtacgg tcttagaagt aaacgtgagc tatggaaggc gcagaccaaa atagctggaa
      961 ttcgaaatca ggcacgtgct ctgttggctc tgaccactga aagtcgacat gaaaaagaaa
     1021 ataaactttt aacatacctg caaagattgg gacttgtagg agaatctgca actttagatg
     1081 atatattaaa tataaagata gaggatattc tagaacgaag gttacaaact attgttatga
     1141 aaaaggccat aactaaatct cctcatcaag ctagacagtt agtggttcac ggccatgttt
     1201 ccataggtga cagaaccatc aatattcctg gatatcctgt caaaatggaa gaagaatcca
     1261 aaattattct acataacgaa tttatgaata ttgttcatgc tacatctcaa tccccaggat
     1321 aactatatat caagaaacta tatcaacgtg gtctattttt ccatctgcgt tcatgtcaaa
     1381 accttgaact actactgccc agtcatcgtc gtgtaaatat cttttcatca atttatctcc
     1441 gtgatctgtt aaagctatta cagctgcctt agtacctatg gatcggacac ctgcaagtac
     1501 tataatactc ctatcctgat tatagggatt ctttattttt gcaattaaac cgtggttgtc
     1561 catattataa attcgtcctg cattgtcagt taatccagac caataattag tctcattgaa
     1621 tttaattggc aaatgatcat taaactcaga agttactata tttgtacctg gaccacctat
     1681 caaaataaga tttctattgt ctatgtcctt ttcagccttt gcatctacat caagttttgc
     1741 tataaagttt gaagaaaggt cacacagtgt acctagataa aaacttaaat gaatagcgta
     1801 atgtccatct ctagccgagg atttatacgg accgtgtgga tcaggtgcac ctacgacaat
     1861 taaaccacaa aatgcattgt ctttatagta atcttctaac caaaatggaa tatttttttg
     1921 agtcatcttt tttgtggatt gatgaatatc tgtttgttct atctcttcaa ctgaatcgag
     1981 ctctagacca aaagatgaac ttgtaatact atataatctt gcagttccgc cccgtatctg
     2041 actagttcca gtttgttcaa tggcacctat ttcaacaagc tttcttacat aataataggt
     2101 tgtttgttca tataatttta attccttggc tatttgtgca gggtacatgg atctcttaga
     2161 taataattct attattttcc aagcaacttg attagatagt attcgcatat cctttgtgtt
     2221 ctcaaatagt aaaatttttt tacttattgt attaccatta cgttcataga tgattgtttt
     2281 ctttttcaat cttatttttc atcagttata aattatttta taccggtaat aataatatat
     2341 gtatactttg tatttttcta aaaaaaatta cggtcaacca taacaaaata ttttataacg
     2401 gtattgcttt ttcattaaag aactatttaa agcatctact tactaaggtt attagtaaag
     2461 atgtgctcga ttattggata tataggaaag tcatctgcag cctcagtatt agttgatagc
     2521 ttaaaaagaa tggaatatag aggatatgat agtgttggaa tagcgacttt agaaagtagt
     2581 aaaatctttg tccgtaaaga tgttggtaaa gttattgaag ttgaaaaatc ccttcgatta
     2641 ggaagtatgc cagggcaggt aggtgttgga cataccagat gggcaactca tggtggtatc
     2701 agccaaatta atgcacatcc tcatacagat tgtgaaaatc agattgtggt tgttcataat
     2761 gggataatag aaaattataa acaaataaaa gaagagttac ttgcaaatgg acatatattt
     2821 caaagtcaaa cggacagcga agtaattgca catcttatag aatttcatta taaaaaagaa
     2881 catgatatta aacaagcaat tattgaaaca tgtaagatat taaaaggatc ttatgcattt
     2941 gttgctattt ttagatcagg cttagttgca ggaacaagac tagatgagcc tttgattgta
     3001 gggttgggaa aagatggaaa cttcatttct agtgatgttt tggggtttct tgaatacact
     3061 gacaaatcta tatttcttga taatcaagat attgtaattc tagatggaca gaatgtaaat
     3121 atttttgatt ttaatggaaa tgcagtctcc cgtcctgtta cacaagtcgc atgggaatta
     3181 ggtgatattg ataaaggaaa atatgctcat tataccataa aagaaataca tgaacagcaa
     3241 aattcaatac taaaagcatt tggcactaaa aaagagataa taactaagtt tgttgatata
     3301 atgtcggaat cgaaaaatgt ttttattact gggagtggta caagttttca ctctgcatta
     3361 ttagcaaaat acctgttaaa taagttctct aatattagaa cagaaatagt tatgtccagt
     3421 gaatttgaat acatgctggg tcctttagat gaaaattcag ttctgattgc aatctctcaa
     3481 agtggtgaga ctgctgatgt tttacattca gtcaaaatgg caagacaaaa acatgcaaaa
     3541 atcctttcaa ttgtgaatgt ttctacatct tctcttgcaa ggcttagtga tcattttatt
     3601 gccattaatt gcggtcctga aatcggtgtg gctgcaacca aaagttttac aggccaacta
     3661 gcaatacttt attctatagt cgaaaaatta tgtcctgata aaatagatat taatgaattt
     3721 atgaatacat ttaatgatag catgaaaaat atattgtcat tagagccaca tattgaatca
     3781 atagcagaaa aaattaaatc ttcccaggac atttatatcc tgggcaaatc tttgcattat
     3841 cctatagctt tggaggggtc acttaagatc aaagagctag catatattca tgcggaggga
     3901 atagctgcag gcgagattaa acatggaccg ttagcgttgg tcgaaactaa cactattgta
     3961 attgttatta atccatgtga tgatacattt actaatacat taaatagtgt ttacgaaatg
     4021 aaatctagag gggcaaaaat tattggtata tcaaaccaaa ataatgacaa ttacgattat
     4081 tttataagac ttcctacaat tgatgaattg atgtatccaa ttcttgaaat tattccatta
     4141 caaatactct cttattactt agcattaaaa aaagatgcta atcctgatta tccgagaaat
     4201 cttgcaaaat cagtgactgt gagatgaata ttttctaaca acaggtaaat attgatggga
     4261 aatagtttta tgttaatata aagtaaaagt tattgtacac agttcaaata actatattct
     4321 cttctatttt tgattcgtat tctttttcta tatttcttaa gagagtccaa ctattgacgc
     4381 gtccttttgt tttgattatg gctgtaatcg atgttcctcc agcacctact ccttccttca
     4441 caaaaccttc agcaaaggct cttagtcctt gtttatttga ttccttcatg tgtagatcga
     4501 cagccagaat tcctatttct ctatctatag aatagaccaa attttcaaaa tccgactgta
     4561 aatcatccaa aatatagttt gtcgttccaa taatgatttt atttgttttt atttctaaac
     4621 gttttagtaa tgttaaaatc gcacacatct gagtacctcc tgctaacatc actctacatc
     4681 cattttccaa tgctcctgtg gctatacccg caatagatgg aatcatgggg tcacctaaat
     4741 aagaaacggc gttaaatggt tgttctttaa attctccgaa tttaatctta tttctttcca
     4801 tgcttgatgt aattatttta tttttcaatt catgtgggtt gtttggcata ctgctgctta
     4861 ttttataggc accatcaatt cccaaagaca acatcacacc taatgctgtt gtagtaccag
     4921 aaggaatact ctccccaagg atcactagat cattattttt agcaagttgt tctccaagta
     4981 atttgccata caaatatgct ttctttacat cttcaaggct catagctatt tcttcagtta
     5041 tattgtttcc atgtttaaga tcaaaggaaa aaaatggtat agctggttta atttttacac
     5101 ctgcgtctac tacaatgaaa ggaatgccag caatatttaa cgaagttcta gtaataattg
     5161 ctggtgtagg ttttccatct ggagttgctg gaactccttt aatacaaata catttaccat
     5221 aatacaggaa ttcggcatct gcaggtggtg taaatttaat caggtttggg ttagctcctg
     5281 caacagttaa tccctgaatt ttactagttt ccgtgtgtga tattacacaa acgaagattg
     5341 gattaataat ctttatatca tttatattga atttattatt gactaatgtt atatcttcaa
     5401 atagttttac caaatactat tcttctccgg tcataaattg aataaactcc tgtagagttc
     5461 ttggagctag aacataattc gtattctttt cttctcctat agttgataca gtcttcattc
     5521 catagttatg accagggtaa actattaatt cgtcgtttaa tttaattatc cttctcaaca
     5581 gactatcata catttcatta acattgcctc ctggaagatc tatacgacca caatttccaa
     5641 caaacaatgt gtctccagtg aaaattattt tcgagtctac gattagacaa atactatctt
     5701 ttgagtgtcc aggtgtatgc aatatatcta taacgatgtt tccaactctt attctatctc
     5761 catccttaac tgctatatcg tgtctatcca tagaattttc gtgttgaaca atttgacaat
     5821 tagtaatggc taaaacttgt tcatttccta aaatatgatc aaaatgtgta tgagtattga
     5881 taatgaattt taccctgtat gaatttcttt taataatttc aaatatctta tcaagatccc
     5941 atgacggatc aataattgct atttcctttt cttcttcatc tataatgaga tatgtaaaat
     6001 ttgccatttg acctacttgg atttgttcta ttttcaaggt cattctatat tattccaccc
     6061 tcaacttcca ttggaatgcc tatttttttc aaatagattg tacctgtata ttttttatta
     6121 tgtaaaagtc catttttaat tctgtgaaaa gttatagtac tgtcagcttt gacgcaatta
     6181 gaatttatgt taccagtatc agggtctaaa cctgaaggta tatctacaga gatgacatga
     6241 gctttagatt tatttattaa atcaattata agtgactgag gttctttgat atctcctttt
     6301 atcccagttc caaaaatacc atcaattatt atgtcagatg ctaatatttc attctttatt
     6361 tgtgtgtcta atttataata tatttttatg gttttatgca ttttcttgat tatctcaaaa
     6421 tttgttaatg cttcttctgt ttttatttta tttaaatctc caagtacaat taattttata
     6481 ggtttcctgg agtgaatgga taaatgtctt gacgcaacca tggcatcgcc accattatta
     6541 cctgtcccac aaataactgt aatttttaaa tcgtctattt ttttaaattt ctttaatatc
     6601 aattctgcta ttccataacc t
//
LOCUS       DATIAS010000447         3467 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1577758, whole genome shotgun sequence.
ACCESSION   DATIAS010000447 DATIAS010000000
VERSION     DATIAS010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3467
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577758"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..2095
                     /locus_tag="VLA74_09020"
     CDS             74..2095
                     /locus_tag="VLA74_09020"
                     /inference="COORDINATES: protein motif:HMM:NF014443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HSF50886.1"
                     /translation="MVEPLERPLSSYIHAQFVTADENTSIAEAVKILQPKNVEIILVT
                     SSSTNDGKKYAGIVTDSDILEKVVMKGEDSDLVFLKSIMSSPIITLPSSATVKEAIEI
                     MRKYKIKHLPVTDITNKEQIIGTVTQEYLAEAIRVAVVEKTFRSYRKIIREHYKPIFA
                     NVAIILQFAGLLMIIPALLGTFLGEWKSSIGIYFAFVSMFLTGYILNVLGEKSPLNLK
                     QSSIVVVLSFFLLSLFGSLPYIYVNPFGDRIDLFSLFATSFMESSSGFTTTGISTIMH
                     PEDLPDSFSFYRSYTEWVGGLSFIYLIVALYYPETKLAGMKNVLGSGILRFKQLLSTI
                     CIIFIVYAAIITLLIFFFGHINILDSLSLAFATFTTGGFVPTSTALNVENPIPLIIIM
                     VGMILAALPFAFHFGIFSKNVEATKEVREILIFIILLTFFIFLFIFIESSFSENQWLS
                     SVFHVISASTTAGFQFIDLSNLSVYGKLLLIVVMLIGGTAFSTAGGIKIARLLLIFNK
                     LNNNKDKTSTYPFNNKNITSSLPPLISATAIQFRKRIQQTFKSYYPEKVAKSSKQITC
                     DVPLDKYKFNIISDKAFREALFVVILYILFTIITALCIYLIEGNNNNNKFIDVVFETS
                     TTISNNGLSVGIISIDLNSISKMILSFNMIMGRFEIIAILYIFISKLRR"
     gene            complement(2538..2798)
                     /locus_tag="VLA74_09025"
     CDS             complement(2538..2798)
                     /locus_tag="VLA74_09025"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NHL repeat-containing protein"
                     /protein_id="HSF50887.1"
                     /translation="MPTGVALDSKDNLYVADTYNNRIQKIQPDGNITSIGEQGSELGE
                     FYLPYGIALDSKDNLYVADTKNNRIQKFSLFQIWKFELGNTN"
     gene            complement(2942..3430)
                     /locus_tag="VLA74_09030"
     CDS             complement(2942..3430)
                     /locus_tag="VLA74_09030"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HSF50888.1"
                     /translation="MLLFNLFLPDKIRIFISYARPDASTLASNVNDYYSNRLHGYDVF
                     LDTLDIEGGIDWSNKIKEEINNSEIVIALITEAVFKSKYIPDEIKYAINKQKLVIPCV
                     RNNVDLSKLSQLGLTREQIIIFNDNEMDKLYGKINDSIASYKKNPQKVKEYYERREKQ
                     KE"
BASE COUNT         1181 a          491 c          482 g         1313 t
ORIGIN      
        1 gcataatcta ataaacaaat ctttatactt ggcaaataaa aaccaatagt ttatcataga
       61 atgatgaata ttaatggttg aaccattaga gcgtccattg tcatcgtata ttcatgctca
      121 atttgtcact gcggatgaaa atacttctat tgctgaagca gttaaaatat tgcaacctaa
      181 aaatgttgag attattctag ttacctcatc ttcaacaaat gatggtaaaa aatatgctgg
      241 aattgtaaca gatagtgata ttttagaaaa ggttgttatg aaaggagaag attcagattt
      301 agtatttctt aaatcaatta tgagctctcc aataataaca ctaccaagtt ctgctactgt
      361 aaaagaagct atagaaataa tgcgcaaata caaaatcaag catcttcctg ttactgacat
      421 tacaaataaa gaacaaatta ttggtacagt aacacaagaa tatcttgcag aagcaattcg
      481 tgtagcagtt gttgaaaaaa cttttagaag ttataggaaa ataataagag agcattacaa
      541 gcccattttt gcaaatgtgg ctattatatt gcaatttgct ggtttactga tgattatacc
      601 tgctttatta ggaacatttc taggtgagtg gaagtcttca attggtattt actttgcatt
      661 tgtgagcatg tttctaacag gctatatttt gaacgtatta ggggagaaaa gtccactcaa
      721 tctaaaacaa tcatctattg ttgttgtgtt aagctttttt ttattgagtc tatttggcag
      781 tctaccatat atttatgtca atccatttgg ggatagaatt gatttatttt ctctttttgc
      841 aacttcattt atggaaagct cttctggttt tacaacgaca ggtatttcta caataatgca
      901 tcctgaagat ttacctgata gtttttcatt ttatcggtcc tatactgaat gggtcggtgg
      961 attaagtttt atttatttaa ttgtggcttt gtattatcct gaaacaaaat tagcaggaat
     1021 gaaaaatgta ttgggtagcg gtatattaag atttaaacaa ttactttcta ctatttgtat
     1081 tatctttata gtatatgcag caattattac tttattaata ttcttttttg gacatataaa
     1141 tatacttgat tcactatctt tagcctttgc tacattcact accggaggat tcgtacctac
     1201 atcgaccgct cttaatgtag aaaatccaat tccattgatt ataattatgg ttgggatgat
     1261 acttgcagca ttaccttttg catttcattt tggtattttc agtaaaaatg tagaggcaac
     1321 gaaagaagtt agagaaattc taatattcat aatacttcta actttcttta tatttttatt
     1381 tatatttata gaatcttcat tttcagagaa tcaatggctt tcttctgtat ttcatgtgat
     1441 tagtgcttca accacagcag gatttcaatt tattgatttg tcaaatctgt ctgtttatgg
     1501 taagttatta ttaattgtag tcatgctaat aggaggaaca gcattctcta ctgctggagg
     1561 aataaaaata gctagactat tattaatttt taacaaatta aataataata aagataaaac
     1621 atctacatat ccttttaaca ataaaaatat tacttctagt ttgcctccct taatttcagc
     1681 aactgcaatt caatttcgta aaagaattca acaaactttc aaatcatatt atccagaaaa
     1741 agtagcaaaa agcagtaaac aaataacatg tgatgttcct ttagataagt acaaatttaa
     1801 tatcatttct gacaaagctt ttagagaagc attatttgtt gttattcttt atattttgtt
     1861 tacaattata actgcattat gtatttactt aatagaaggc aataataata ataataaatt
     1921 catcgatgtg gtatttgaaa cgagtactac tatttctaat aatggtttat cagtaggaat
     1981 aatatctatt gatttgaatt caatatctaa aatgatatta tcttttaata tgataatggg
     2041 aagattcgaa attattgcca tattatacat atttatttca aagttgagaa gataaattac
     2101 ttagaatatg aatttgaatt atatagaatt ttcccactgt atcgaaggat tcaaattcca
     2161 cataatcctc caatctttac aaaattattt tgaatcctgc tattagattt tacaatcctt
     2221 acttctcttt aactgatttc aaataaaatg ataaaaaagt aaagattaat tcttagttca
     2281 tattattatt gcttcatgaa ttctattaaa aaagatagga ttggaaccca gagttcaatg
     2341 gggccagtgg gatgtgaaac aaatttgaca taaatattgg tcctactata gaaaaagtag
     2401 ttttagtaaa agatgatgtt actatttata aaatattaca gatagaatat aacaatttaa
     2461 tatctaatca atttaaaata aaaatatatc tttaattaaa agtttttttg ctctactttc
     2521 tatattgcca aatataatca atttgtattt ccaagttcga atttccaaat ttggaataat
     2581 gaaaattttt gtattctatt atttttagta tcagccacat ataaattgtc tttactgtct
     2641 aaagcaattc catatggtaa atagaactct cctaactcag aaccttgctc tcctatagat
     2701 gttatgttcc catctggctg tatcttctga attctattat tatatgtatc tgccacatag
     2761 agattatcct tactgtctaa tgcaactcca gttggcatag aaaattctaa attttttgta
     2821 cttagttttc cccagaattt ttcaaatata tatttttctt caatataaga atgtggttct
     2881 acaaaataga ctactaatac tattgctaat acagacccag caattgcaga aatagctatc
     2941 tttattcttt ttgtttctct cttctttcat aatattcttt tactttttga ggatttttct
     3001 tataagaggc aatagaatca ttgattttgc catagagttt atccatctca ttatcattaa
     3061 aaattattat ctgttctctg gttagtccca attgtgaaag ttttgataaa tcaacattat
     3121 ttcgtacaca aggaataacg agtttttgtt tatttattgc atattttatc tcatcaggaa
     3181 tgtatttgct tttaaatact gcttcagtta ttagtgcaat aacaatttct gaattgttga
     3241 tttcttcctt tattttattg gaccaatcaa ttccaccttc aatatccagg gtatctaaaa
     3301 acacatcgta accgtgcaat ctgttactat aataatcatt gacattactg gctaaagttg
     3361 aagcatcagg tctagcatat gagataaaga tacgaatttt gtctggcaga aataaattaa
     3421 aaaggagtat ttatataaag aatttggttt gattcccttt tcttaaa
//
LOCUS       DATIAS010000448         2550 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1577849, whole genome shotgun sequence.
ACCESSION   DATIAS010000448 DATIAS010000000
VERSION     DATIAS010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577849"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..1801
                     /locus_tag="VLA74_09035"
     CDS             263..1801
                     /locus_tag="VLA74_09035"
                     /EC_number="2.4.2.57"
                     /inference="COORDINATES: protein motif:HMM:NF003338.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP phosphorylase"
                     /protein_id="HSF50889.1"
                     /translation="MKFKAKILGIESGGRPVITLSKDDAYELGIRSGERVKLLYENKE
                     MIVIVNIVTKSVPKGIAGIYDELRTIGNIKESSVLEIEVIDFPQSIYFIQNKLKKSKL
                     NYKEIFEIIKDVVNGNLNEFEIAAFLTALDHQGLDIDEATSLTLAMVETGKKLEIANK
                     PICDKHSIGGVPGDKTTLLVVPIIAAAGLTIPKTSSRAITSASGTADRAEILMPVNLT
                     TEQMKMVIEKTNGCIVWGGSLELAPADDKFIQVEYPLSIDPLLLPSIMAKKKAVGANY
                     FILDIPSGRGTKVKTTGDADLMAKEFMELGKRLEIKTQSIISFGEQPIGNTIGPALEA
                     REALEVLQGSKVPDLIDKAINICGLIFSMAGIGGKNLALDILKSGKAEKKMKEIIYRQ
                     GGDSEVNIEDIKIGDHKLEIQAVNSGNVLWLDNNIIVTIARLAGAPKDKGAGIIIHKK
                     IGQKVKKDDKLLTIYSEKKNRIHSVEKMLTEIKPLQVGNRHEMIIHTFLDIPEPKKTF
                     ILER"
BASE COUNT          949 a          371 c          487 g          743 t
ORIGIN      
        1 gcatattgcc tattaaacac agaaataact aaaagggtac atcagaatat cccacattcc
       61 agcattactt gtgaatgaag acataacaag cagatacagc tgttaataaa gaatgaaggt
      121 ttatcagatc gaattttaca aaatatctat tatattgaaa atatggtcta ttcttttatt
      181 tttgtttagg agtttgaaag gaaaaagatc tacattatta acctcattgt cagatagaat
      241 ctgaacaagt agggaagagt agatgaaatt taaggctaaa atactcggta tagaatctgg
      301 gggaagacct gtgatcactt tgagtaagga tgatgcctat gagctcggaa taaggagcgg
      361 agaacgggtt aaacttttgt acgaaaataa agaaatgatt gtaatagtta atattgttac
      421 taaatccgtt ccaaaaggaa ttgcaggcat ttatgatgag ttgagaacaa tcggaaacat
      481 taaggaaagc agcgttctag agatagaggt aattgatttt cctcaatcca tttattttat
      541 acaaaacaaa ttgaaaaaaa gcaagttaaa ttacaaggag atttttgaga taataaaaga
      601 tgttgtaaat ggaaatctaa atgaattcga aattgcagct ttcttgactg cacttgatca
      661 tcagggattg gatattgatg aagcaactag cctcacactg gcaatggtag agacaggaaa
      721 aaagttggaa atagcaaata agccaatatg tgataagcat tccatcggcg gagtccctgg
      781 agataaaacc acgcttctgg tagttcctat aattgctgcg gcaggattaa ctattccaaa
      841 gacttcctct cgagctataa cttccgctag cggaactgca gatagggctg aaatcctcat
      901 gccagttaat cttacgactg agcagatgaa aatggtaata gaaaaaacta atgggtgtat
      961 tgtatgggga ggatctctag aattagcacc tgcagatgat aaatttattc aagttgaata
     1021 tcctctttcc atcgatccac tgctactacc ttcaatcatg gcgaagaaaa aggctgtcgg
     1081 agcaaattat tttatattag atattccttc tggacgtgga acaaaagtaa aaacaactgg
     1141 tgatgcagat ctaatggcta aagagttcat ggagcttgga aaaagattgg aaataaaaac
     1201 tcaatcaata atatcatttg gtgaacaacc cataggtaat accatcggac ctgccttaga
     1261 ggctcgagaa gcgttagaag tactccaggg aagtaaagtt cctgacctta tagacaaagc
     1321 aataaacatt tgtggtttga tattcagtat ggctggtata ggaggaaaga acctcgcgct
     1381 agatattttg aaaagcggga aggcggagaa aaaaatgaag gagataatat atagacaagg
     1441 cggtgattca gaggtcaata ttgaggatat aaaaattgga gaccataagc tagaaattca
     1501 agcagtaaat tcaggaaatg ttctgtggtt ggataacaat attattgtta cgattgctcg
     1561 tttggctggt gccccaaagg acaagggagc tggaataatt attcataaaa agataggaca
     1621 aaaagtgaag aaagatgata aactacttac aatttattcg gaaaagaaaa ataggattca
     1681 tagcgtagaa aaaatgctaa ccgaaataaa accacttcag gtgggtaata gacacgaaat
     1741 gataattcat acgtttttgg atattcccga acctaaaaaa actttcattt tggaacgtta
     1801 gaaatcaatt gggcaggtat atattattta tattattgaa aagcattgtt acttccaaca
     1861 ttcatgtttc aaagtaacca atccgagaga tccataaact caactctcat gaatagtttt
     1921 ttggagtaag cgaatagcat ggtcagaata attcccggta ctaataacaa agataataaa
     1981 gataataaag aatcgttatg acgatattta atgtacatat atctagattg tgtattcaaa
     2041 cattgttcgg cttgcgactt ctcattatgc tcattatttt ataaattggt tagatgcctg
     2101 gtcccactat ttttagtatg atacctgtaa tacacaagaa gagatactag ctaatagaaa
     2161 atgattaatc ttttaattcc tactctgttg catatttttg ataatgaaga taagagcttt
     2221 acatgagcag aattagttac ctttagaccc tgtctttttt tttacgtacc ttaaattaga
     2281 aacggaataa tctattattt ttttataaat gttaagatat aacaactcta caccaaaaaa
     2341 tattacgttt aaaaaaaatt taaaaggatg aaaaacatca tgaatatgat aaccaaaata
     2401 atcctttcca tcttgtattt aaaatggata cttggaaacg ccattaaagt acatttaaca
     2461 agaattgaca ttgtgcagcg cagagcgcat agcctcgata tcagagtagg atataattaa
     2521 ataattataa tatgattatt ttataactat
//
LOCUS       DATIAS010000449         2930 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1714736, whole genome shotgun sequence.
ACCESSION   DATIAS010000449 DATIAS010000000
VERSION     DATIAS010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2930
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714736"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..454
                     /locus_tag="VLA74_09040"
     CDS             305..454
                     /locus_tag="VLA74_09040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50890.1"
                     /translation="MNHDKLDNSLMSLTLYLTNAFDRIPQSVSLTVPVIASIHAGFII
                     GFIKS"
     gene            1209..1499
                     /locus_tag="VLA74_09045"
     CDS             1209..1499
                     /locus_tag="VLA74_09045"
                     /inference="COORDINATES: protein motif:HMM:NF012725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF50891.1"
                     /translation="MYIHKKNVITITILIVSISILSSSITIVNQIASAQTNTNNVTSD
                     EAIELNEKGVALGSLGKYDEAIVLYDKALAIEPNNALALNDKNLALDALNKN"
BASE COUNT         1033 a          405 c          417 g         1075 t
ORIGIN      
        1 tagatctatt gcgtaattag cgacaatata aaatattaca tatttgatcc aagataaaag
       61 agaataatgt tattatattt ataaaattta caaaaattaa tttaattttc agaatatttt
      121 gattcctttc taattacgca aaagatctta tgttttgctt tactgtttgt gctgcttgtt
      181 gtaatcccgt tatattttat ttgttgtttg atctctttat cagaaagatt ataaaaattc
      241 taatggttat tctagacaga ttgctgcttt acttttattt cttcagaatc aagatataat
      301 tatagtgaac cacgataaac ttgataattc tttaatgtca ttaactttgt atttgactaa
      361 tgctttcgat agaatcccgc aatctgtttc tttaactgtt ccagttattg catcgattca
      421 tgcaggattt atcataggat ttataaaatc gtaatttatc atgtcttttc tcctattaaa
      481 aagagccgcg ccgattatcc tcattttatc attcaaatat aatattttat aaataagtat
      541 aaaaagaaag tgttagcatt aattttacaa ataaaaaatt tattctattt aaaatcatag
      601 gggtttttag cctaaacaat taatataatt aattccactg tgactgtatc taagtatgtc
      661 aaatgctgaa agtaaattta gcccagagga agatataaaa aatattcata ataaaatcaa
      721 tgaatgtcta ttcaatagaa ttgtctgatg agaatattac atttcagatt aagagcatac
      781 aagagaataa aaaataatgt ctcggtgggt tcaaaaactt ttcagcttat gacatatatc
      841 aactatcaca tggtataaat aaattcacca tagacaaaag cacgacaata atttgtacag
      901 ccactaggat ataggttggt tcagtcagag gatctcactc tcatacagga gtatgttaac
      961 tttgaatcta gcctgaatac aataggaatt gttattcaat aaagattttc atatagtcag
     1021 gaccgatcat ctcctttttc cagttcgttt tgatcgcttt tatattatat acgaatcttg
     1081 aattattctt catcatgcct acatagaact gatattcata tccagtactg aagaaagaga
     1141 tatactaaga ttgaaaatag ttttaataac ataacgctaa ataatagccg ttaagaattg
     1201 tttcaattgt gtacattcat aaaaaaaatg taataacaat aacaatattg atagtttcga
     1261 tatcgatatt atcgtcatca attactatag taaatcaaat agcatcagca caaactaata
     1321 caaataatgt aacatctgat gaagctatag agttgaatga gaaaggtgtt gctcttggta
     1381 gtttaggaaa atatgatgaa gctattgtgt tatatgataa agctttagct atagagccta
     1441 ataatgctct tgcattgaat gacaaaaact tagctcttga tgctttaaac aaaaactaaa
     1501 tacctgctgc tcagttgcat ggacaataat aattcttact atttcttttt aatttaggaa
     1561 aagatggaaa atctgtaaaa tattttgata aactttcaga ggcaaataaa ctctttatct
     1621 ttttctacta tgaatctaaa tatagcagag tggtctaata aaattgatat ttattctaag
     1681 aaaagataca tgaagaagag ataaaatcct ttgatacagc tttaggagta aatcaagtta
     1741 tgctttagca tagactaata gaagtattct aattgataaa ttaggtaaat tttaaattca
     1801 taacttttgc ctcaataata aatacaaatt ttcattatct tcggttaatg ttttaaatga
     1861 tataggaatg taatgtttaa cgtatctaag tttagcttta atttctgtat ctggattaaa
     1921 atctaaattt cttaaattat tacactgttc taaccacgtc ttcaatatct tataagagtt
     1981 agcgtattct aattttttaa tatttactaa ataaggacat aatattctcc aaagcgcata
     2041 ttttcttcca tcttctatag gagtctctaa taatttctcg atccatggta tagtatttga
     2101 attagatgaa aaattataag atgaatgttt tcttaattct ttttgtcttt tatctactaa
     2161 ataagcaaaa aaatctccta ttaataacgt aatagatggt ctatatccat tccatttttg
     2221 tacaattttt acttctatat catatttaga attgattgat cctggtattc ttagttgttg
     2281 tacttacata gataggtaac agattcactt accaacatgg gtaacacttt ttatctgctt
     2341 gactgttttg ttattcttac aactatttaa tcttcctttt attagaaaca tttcagatgg
     2401 tgtgtgacca ttgataccac catgtgttct ctttcttcat tatatgcttt gacaaacata
     2461 gaatatcttc tctttccatc atttacattg ggaatatttt ctagtgctaa aaattcattt
     2521 ttgactatct tgttgaatac atgtaaaagt catttactgc tattattctc ttatccaact
     2581 ggctaacccc ttagcatacg tgatctatct tctgtgataa gatcttgctt gttgaatggg
     2641 ggatatgtgt tagctgctgt atatgtgagc catcaaaaga gctctgatag atgtttgcag
     2701 ctttgtctat tagctggttg gttacttgtg gtaatagtat cacaataaaa agaaaaggag
     2761 gtgaaaaaga gaataacaac aacaagatta gaatccaaaa atagtagtga ttactacatt
     2821 gcagtagaca ttggaaagag aaattgtgtt gtatgtataa cagataaaga tggttccata
     2881 ttagaagaaa caaaatatga caatacgtta caggaagcag aaagatttgc
//
LOCUS       DATIAS010000450         2645 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1714955, whole genome shotgun sequence.
ACCESSION   DATIAS010000450 DATIAS010000000
VERSION     DATIAS010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714955"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..922
                     /locus_tag="VLA74_09050"
     CDS             <1..922
                     /locus_tag="VLA74_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSF50892.1"
                     /translation="DLWGIWGEPIKIPLPHISGSDVSGTVVDVGENVLSIKKGDRIVG
                     YPNLTCRICKDCTSGKEYDCRQRQVWGFQTGPLWGGFAQYTYLPEVNVIKIPNNLSFQ
                     DAAAISMVGMTAWHMLVTRANIQPGQTVLIMGGGSGMGIAGIQIAKLFNCDVIATAGN
                     QEKMDKCLELGADHVVNHRESDWYKKVRSLTKDREGVDIIFEHIGKSVFAQEVSLLNM
                     GGTLVSTGATTGYDSKIDLRYLFFRGLNLIGATQGTRGGLEEVIKWTSKGKIKAIIDT
                     VYPFEDMVMGHIKMMESQLFGKLVTTPQKL"
     gene            1062..1370
                     /locus_tag="VLA74_09055"
     CDS             1062..1370
                     /locus_tag="VLA74_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50893.1"
                     /translation="MVNLFGAFAIHNPESCPMNNVEAKKVFLEIKDKLEQNKSKYGVK
                     NIEAFYMSVLEHEWMVIFEAESAHDIESLCIEAGLGLFNTVKIVGLKRYDDVHNKIGK
                     "
     gene            1748..2110
                     /locus_tag="VLA74_09060"
     CDS             1748..2110
                     /locus_tag="VLA74_09060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50894.1"
                     /translation="MDYKKEFIVSKIETSKDNSPYVYVSIYTKDHFSPTRRQQGFPEN
                     PFGVAAIPITSLDDLKNLPKKISDAIESAFGRGRSNISSESTTFKMNVREFEELGIKN
                     GDKVTLEINISRNNDIIA"
BASE COUNT          993 a          344 c          454 g          854 t
ORIGIN      
        1 tgatctttgg ggaatatggg gagaaccaat aaagattcca cttcctcata tttccggaag
       61 tgatgtttca ggtacagtag tagatgttgg agaaaacgtt ctaagcataa aaaaaggaga
      121 cagaatagta ggatatccca atctaacctg tagaatatgt aaggattgta cttctggcaa
      181 agaatatgat tgtcgtcaaa gacaagtatg gggctttcaa acaggtccct tatggggagg
      241 atttgctcaa tatacatatt taccagaagt caatgttata aaaattccaa ataatctttc
      301 ttttcaagat gcagcagcta tttctatggt tggaatgaca gcttggcata tgttagttac
      361 tagagctaac atccaaccag gacaaactgt tttgattatg gggggtggaa gtggtatggg
      421 aatagcaggt attcaaattg caaagctgtt taattgtgat gttattgcaa cagcgggtaa
      481 ccaagaaaaa atggataaat gtcttgaatt aggtgccgat catgttgtaa atcatagaga
      541 atctgattgg tacaagaaag ttagaagttt aacaaaggat cgagaaggcg tagatattat
      601 ttttgaacat ataggaaaat ctgtatttgc gcaagaagtt agtctattaa atatgggagg
      661 tactttagta tctactggag caacaacagg atacgattca aaaatagact tgagatatct
      721 attctttaga ggattaaatc ttattggagc tactcaagga acacgtggag gattagaaga
      781 agtaatcaaa tggacaagta aaggaaaaat aaaagcaata atagatacag tttatccttt
      841 tgaagatatg gtaatgggcc acataaaaat gatggaatca caattatttg gaaagttagt
      901 tactactcca caaaaattgt aattagtata tttaaaattt ttttaaataa tggtctaaca
      961 attgatgtaa cagaattgat atattataag agatgcaatt cactaaagaa tataaattat
     1021 aaatcatata acttaatatc ttcatttctt tacaacatat tatggtaaat ctctttggcg
     1081 cttttgctat acataatcct gaatcttgtc ctatgaacaa tgtggaggct aaaaaagtat
     1141 ttcttgaaat taaagataaa ttagaacaaa ataaatcaaa atatggagta aaaaatattg
     1201 aagcattcta catgtcagtc cttgaacatg aatggatggt aattttcgaa gcagaaagtg
     1261 ctcatgatat agagagcctt tgcattgagg caggactagg cttgtttaat accgtaaaaa
     1321 ttgtaggtct aaaaagatat gatgatgtac ataataaaat tggaaaatga agaaataatt
     1381 tattgttcct aactatagaa ctacaaaatt gtgtcaaaat caacagttga tacacctcca
     1441 ggcccattta acaacaagac tttgaatctt tatatcaatt actagtaata taatagacta
     1501 tactaaaata acatctatca atgttttcta gcgataaacc aattgattag aatttccaag
     1561 cttttgctca aaccagtatt gtagattcaa cgtaatttag gaatcaacta aagaattcta
     1621 aataacataa aaaattctat aaaatgtaga gtcagagtat ttagtattat tatgaatatt
     1681 gcatggaaga ccgagctgac ttacctcaaa tagctgcatt tatttgtgta attgaataag
     1741 ttatcatatg gattacaaga aagagtttat cgtatcaaaa attgagactt caaaagataa
     1801 cagtccttat gtttacgtat cgatctatac taaggaccat ttttctccta ctagaagaca
     1861 gcaaggtttt cccgaaaacc cttttggagt agcagcaata cctattactt cattggatga
     1921 tttgaagaat ttacctaaga aaatatctga tgctatagaa agcgcatttg gtagaggtag
     1981 gagtaatata tcttcagaat caactacatt taaaatgaat gtcagagaat ttgaagaact
     2041 tgggataaaa aacggagata aggttactct agaaattaat atatctagaa ataatgatat
     2101 catagcatga gattgctaag agatcccacg atattattac taatcttctt aacttaatgg
     2161 gggtagtcct aatccgtctg ttatcaatga tacaagtatt ataaatagtt tgactcctat
     2221 tttatatgtt tgaaaattgg atacataggt ttgacaattt aagtgtgatg aactattaat
     2281 atggtaaagc agggaaatgc ttaatgtttt ctttaattgt taagcatatt ttcatataga
     2341 aaaattcgca gcttatgaag aacagtgtat caatatattt tataatatat tatcagaaat
     2401 atctgattaa tattttaaca aataagttac caaattaata aatatcagtt taccgatccc
     2461 aattacatat caaactagaa gccctcaaaa cccttattac tataccaaat gttttcagta
     2521 atatcctctt tctatatagg atagtattta tcaactgcta aattatcaag ttatggatag
     2581 aattatattg aattattctt aaaattttaa gattatatga tgttaaagat ttcaagtttt
     2641 ttatt
//
LOCUS       DATIAS010000451         2221 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_354522, whole genome shotgun sequence.
ACCESSION   DATIAS010000451 DATIAS010000000
VERSION     DATIAS010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354522"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VLA74_09065"
     CDS             <1..255
                     /locus_tag="VLA74_09065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50895.1"
                     /translation="AKQHYKSKKVLQYFADNKDSLIPVYLPTASPEFMVLEEIWHIAK
                     NDLLVLQYYSSFADFKNKISTYFRTKRFNLDMRNYLLRDE"
     gene            429..1322
                     /locus_tag="VLA74_09070"
     CDS             429..1322
                     /locus_tag="VLA74_09070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50896.1"
                     /translation="MSLTFTTKTKGTLAFIFLVTSITTFSTIENNINNTLISAYAQDN
                     TSDTTISSAIPSAESIHTTERLELPPNVDAFVMLIVNEAHESWEEEPYKLITDKNAYY
                     IPSNLVIHEGTKLTFLNADAPWDTPHPHNIKLVNVPDNENIGDGEPVYTTGILNYTNS
                     SEPVILPVGTYSIMNTEYDTKKGTTITVLENSQNMNNSNRLVIGGFYTPTNQVENNRD
                     NDGNPHSGSLAYYRQAFSENGFKILSEHNFSYATCDYCPGEYWPDNKAADHTLVIFGT
                     EQPLEQALDKLEELIKDNVYV"
BASE COUNT          821 a          324 c          315 g          761 t
ORIGIN      
        1 gcaaaacaac actacaaatc aaaaaaggta ctgcaatatt ttgctgacaa taaagatagt
       61 ttaatcccag tataccttcc aacagcatcg ccagaattca tggtactgga agaaatatgg
      121 cacatagcca aaaacgatct gcttgtccta caatattatt catcatttgc tgattttaaa
      181 aataaaatat ctacatattt cagaacaaaa agattcaatc ttgatatgag gaattacctt
      241 cttagagatg agtaagcgta tttatcttaa ttggtatagt ttgtctgtta aattacaaat
      301 ttggcaatca tatctaagga cattactctc ttttattatt cttcttttgc tcggcttttt
      361 attgtggaaa ggcattcttc actataataa acaatataac tcctttaaag gatagatata
      421 tacaaaagat gagtcttaca tttacaacaa aaacaaaagg gacactcgct ttcatatttt
      481 tagtaacctc aattacaacg ttttctacaa ttgaaaacaa tattaataat accttgattt
      541 ctgcgtatgc tcaagataat acttcagata ctacaatttc ttctgccatt ccttcagcag
      601 aatcaattca tacaacagag cgtttggaat tacctccaaa tgtagatgca tttgtcatgt
      661 taatagtaaa tgaagcacat gaaagttggg aagaagaacc ttataaactc attacagaca
      721 aaaacgctta ctatattcca tcaaatcttg taattcatga aggaacaaaa ttgacattct
      781 taaatgctga tgcaccatgg gatacaccac atccacacaa cataaaatta gtcaatgttc
      841 cagataatga gaatattggt gatggtgaac cagtatacac aacaggtata ttgaattata
      901 caaatagttc tgaaccagtt attctacctg tcggaacata ttcaataatg aatacagaat
      961 atgacacaaa gaaaggaaca acaataacag ttctagaaaa cagtcaaaat atgaataaca
     1021 gcaatcgcct agttataggt ggtttctata ctccaacaaa tcaggttgag aataatagag
     1081 ataatgacgg taatcctcac tctggttcat tagcttatta taggcaggca tttagtgaaa
     1141 atggatttaa aatattaagt gaacacaatt tctcttatgc tacctgtgat tattgtcctg
     1201 gagaatattg gccagacaac aaagcagcag atcatacact tgttatcttt ggtacagaac
     1261 aaccccttga gcaagcatta gacaaattag aagaattaat aaaagataat gtgtatgtat
     1321 aatcatttat tttttaattt actggcctat ttttttgttt ttatatgaaa aagaattaca
     1381 taagagaaag aatcttaata caaaaaaagt tatcgaaaaa atatgtgctg tgtgactatt
     1441 gagggagatc aaattgcaat gattctctta aaattataat agttaagagt ttgatatcta
     1501 ctattgctat tttaaactaa ttcaattcta tataatctgc tagattataa cctctttttt
     1561 atatgtagtc ataatcatat taaaacaact ttaagttttt ttattccaat atcaaaaaac
     1621 atattaatga agattattct aaaataatgt tcttttattt tactttttct tgtagtttgt
     1681 tatgttacat tttatttagt agatagatta caaaatctat taaatagttt caccttttaa
     1741 taatcaggtt catttaaaaa tctaactaga cagtcgggag ttgaatagtt atggtttcaa
     1801 tgttcaatca taattggttt aattggtagc agaaatatct ctaaggtgat tgattaatta
     1861 atatttaaca gtataataat tttattagca taaatacaaa cttaagatat attcttactg
     1921 tcaaatagca ctaggaacca aaatatatta ttgactttga aaataatgat taatagatga
     1981 attgaatatt agtaatcgcc atcctccact ttggatatta atttatggtc ttgtcataat
     2041 agcagttggt atatttctgt ttatgatagg atctggaata agagcctatc cgaaaagtag
     2101 tttatagttt ttaagtttat ggtacaatag atttattcga caaagctaag tgtctctaca
     2161 ctatatatca cgagattagt ttgatatctg aaatttctgg aatagattca tcttatgaaa
     2221 t
//
LOCUS       DATIAS010000452         2412 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1578645, whole genome shotgun sequence.
ACCESSION   DATIAS010000452 DATIAS010000000
VERSION     DATIAS010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1578645"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VLA74_09075"
     CDS             complement(<1..208)
                     /locus_tag="VLA74_09075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50897.1"
                     /translation="MKSLVLGLMTIMSFIVISLIYTTAFAQSTNQTSTLQQQQNAFCK
                     LTESDMLGPFYKKGAPFKQRLGEGV"
     gene            complement(482..877)
                     /locus_tag="VLA74_09080"
     CDS             complement(482..877)
                     /locus_tag="VLA74_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50898.1"
                     /translation="MPNKDDSNKRNSILSTSTTIESLAVRKQQQSQQQHVHLQEQDDS
                     HRGKNPHSKISEEILLKHNKQNIIDFLLDNIDSIRIEDLKIYEPIYKCYREKGNSQIC
                     NSLSNIICKNCKNTKDIWFCTNHWKKHAI"
     gene            complement(1098..1547)
                     /locus_tag="VLA74_09085"
     CDS             complement(1098..1547)
                     /locus_tag="VLA74_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50899.1"
                     /translation="MKIIEQSLQESNAYSLFVYAIRSQVTRDYYLRRLRIFFNYIDLQ
                     SDLTIEERCNYFANKGTEDPSWAFHCIVRFLQYQKERVEKEEITGATLRNFIKAIKLF
                     CEMSDIPIPWKKITRGLPKIRRHTYDRAPVLEELQVYASIPTDESKQ"
     gene            complement(1561..1737)
                     /locus_tag="VLA74_09090"
     CDS             complement(1561..1737)
                     /locus_tag="VLA74_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50900.1"
                     /translation="MSKTIHTPPNPDQRYDLICDRKDNIILSKNHVKYDSQTTGPIVI
                     LVLKLDSLEKVKIR"
BASE COUNT          753 a          331 c          354 g          974 t
ORIGIN      
        1 ctactccttc accaagtcgt tgtttaaatg gagcgccttt cttatagaaa ggacctaaca
       61 tatcagattc agttagttta caaaaggcgt tttgttgttg ttgtaatgtt gaagtttgat
      121 tagttgattg tgcaaaagca gttgtataaa tcaaagatat gactataaat gacataattg
      181 tcatcaagcc aagaacaaga cttttcattg taaaaggttt aaatcatatt ttatataata
      241 gttgaaggca attgtttgtt aatattattt taaccagatt agaaatgtat gctaatcctt
      301 tacaattatt aaacatatga atattaataa actctaataa actaaaatga aagtttgaaa
      361 aaatactaat tattattatt ctacttgaca attctttttt ctctatcatc gttctcaatt
      421 atcgacaaat caatcatgtg tgattcagca atattgatat gtcttatctg ttatcatgtt
      481 tctatattgc atgttttttc caatgatttg tacagaacca aatatcttta gtatttttac
      541 aatttttaca aatgatatta gataagctgt tacaaatctg agaattccct ttctctcgat
      601 agcatttata gataggttca taaatcttca aatcttcaat tctaattgaa tctatattat
      661 ctaaaagaaa gtcaatgata ttctgtttgt tatgttttaa tagtatttct tcgctgattt
      721 tgctgtgagg atttttaccc ctgtgtgagt catcttgttc ttgtagatgt acatgctgct
      781 gttgtgattg ttgttgtttt cggactgcta atgattctat tgttgttgag gtagataata
      841 ttgagtttct cttatttgaa tcatctttat taggcacaca aggggtattt tcgtcacagc
      901 aaacgttgat gttaattcac tctaattaat tgaggctagg ttataattca ataaaaatat
      961 aatgttagac tagcagtatc tgatcatttg ttatgttcct aacatgtatt tgattgctct
     1021 tggattatct tttttagttt tacagttata atatacaaaa gtatctgata gtactattga
     1081 agaagccatg gtgtaaacta ttgctttgat tcgtcggtcg ggatactcgc atatacttgg
     1141 agttcttcta agactggtgc tctatcatag gtatgtcttc tgatttttgg taaaccccga
     1201 gtaattttct tccatggaat aggaatatca gacatttcac aaaacaactt gattgctttt
     1261 atgaaatttc gtaaagttgc tcctgttatc tcttcttttt caacgcgttc tttttgatat
     1321 tgtaagaatc taactatgca atgaaatgcc cacgaaggat cttctgttcc cttgtttgca
     1381 aaataattac atcgttcttc gattgtaaga tcagattgta aatcaatata attaaagaag
     1441 attctcaatc ttctaagata gtaatctctt gtaacttgtg atctaatggc atatacaaat
     1501 aaggaatatg cattagattc ttgtaaactt tgttctatga ttttcatttt attttttgat
     1561 tcaccttatt tttacctttt ctagtgaatc caatttgaga actaatatca caatggggcc
     1621 agtggtttgt gaatcatatt tgacatgatt tttagacaag ataatgttgt ctttcctatc
     1681 acaaattaaa tcatatcgtt ggtctgggtt cggaggtgtg tgaattgttt ttgacacaat
     1741 atttttggcc catgttttgt attaattgat ctataatata atgatgagaa ttatttaata
     1801 gtttttttta tataaagttt tgaggcatta catctaacat agcagcaaac tagattatac
     1861 tattacttca catttaggtt actagaacct atatttgtct aagtctttct ctataagtgc
     1921 taaactatca tagaatgatt taaggcattt ttgataaata gagtaatgaa attttctccc
     1981 ctcgaaacat tcgcgtggat tttgatttcc atgttgatga tttaagttat tacaatgtcc
     2041 ttctttgact ttatttgtta ggttcattag tgtccaagac aagtatacta tactaaaaat
     2101 ccacatctgt atctccaaag tatttccatc ataacgaata tggcattttt gggattcata
     2161 agtttcagaa gatataaaga tagtctaaat ttgtcattat attctttaca agattattaa
     2221 tatctaataa tccttctttt gtagttattt tgctaatttg atcttgaaca aaattataaa
     2281 attcatttat gtttgtttga gtaatttcca taatttttat tatattaagg aattatatta
     2341 ataagcctaa atataattat taaatatgaa taccattcat aaagctaaaa ttattttaga
     2401 agtctaatca tt
//
LOCUS       DATIAS010000453         3384 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1853052, whole genome shotgun sequence.
ACCESSION   DATIAS010000453 DATIAS010000000
VERSION     DATIAS010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853052"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..663
                     /locus_tag="VLA74_09095"
     CDS             133..663
                     /locus_tag="VLA74_09095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50901.1"
                     /translation="MDNIYVESMFTNNNRLFIVLVLGISLSTAVATAPIITQFALAQS
                     PSQQAQMQQQRQQQSQLQTQTQQSQLPILQQQQGQFQHPEDPTLWGQVISNRAEEESM
                     RHSSNPVPQNDPPDTLPQDINRETPRDGVGNVQLTPQEIEKHPAFHAAALCSQFPGAP
                     GCEGVIVPESMIPPSP"
     gene            complement(1271..1750)
                     /locus_tag="VLA74_09100"
     CDS             complement(1271..1750)
                     /locus_tag="VLA74_09100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50902.1"
                     /translation="MMHGFRKAFKTICENAGMKSINIELLLGHNIGVSKSYYKPTEKE
                     VLHDYLNAVDLLTISDENKLSKKIMELSDKNKVQEYVINGKLQEKDEQINNLQESIKF
                     LSDRFNAFLISQPENKILYDDNGQSGIVKGIELKSELNNKTVGEIVLPSTNSRNNKS"
     gene            complement(1859..2401)
                     /locus_tag="VLA74_09105"
     CDS             complement(1859..2401)
                     /locus_tag="VLA74_09105"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF50903.1"
                     /translation="MINFPIYMIDGIGGIVIFVSNQTRAVEFYTQKLGFDIKGEYPYK
                     NTKWIEVAPKNSTTTISLMEPNQDMMTNEEIEQAKKEIGTMTSLWFYTKNINDTYKEL
                     QEKRVNIIAAKLLVYPGDEEEYYTFVTPEAWNYLKEWMDFRFSHGENISGESWFMRDI
                     WQVTDLPTHGGQIRLASNPQ"
     gene            2612..3280
                     /locus_tag="VLA74_09110"
     CDS             2612..3280
                     /locus_tag="VLA74_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50904.1"
                     /translation="MNYFFLVIFLSIVLVIFNTHTHSLFAEQQNLKTNSNYQLSLNFS
                     SQQEKELFLQKWLNFSPSKEIKEVPKTQITLAIYTLNDLVNELVTGVKLENITTVPNQ
                     VKVNDIFEVNATVRNTLPFNVTIIAGNCNSDFSTNFYNNVEEIEVPQCMNRVLPTVLE
                     PRDKVTVQESSGIGKQYNAVAEGEANGTAILSYSIEVKPEGFLETTSLKGQVVQPFSF
                     TILP"
BASE COUNT         1150 a          544 c          459 g         1231 t
ORIGIN      
        1 aatattgcta tgaaaatata ttaagaattg gacaattata ctagaaaatt cctgttataa
       61 atatcttgtg gaatttaatg agtaaataaa taaattgaaa tttatcaaca taatttaacc
      121 aatatttata taatggacaa tatttatgtt gagtcaatgt ttacaaacaa caacagatta
      181 tttattgtcc tagtattagg aatatcatta tcgacagcag tagcaactgc gccaataatc
      241 acacaatttg cattagcaca gagtccaagt caacaagcac aaatgcaaca acaaagacaa
      301 caacaatcac aattacagac acaaacacaa cagtcacaat taccaatact tcaacaacaa
      361 caaggacaat tccaacatcc agaggacccg actttatggg gtcaagtaat ttcaaataga
      421 gcagaagagg aaagcatgag acactcatct aatccagtac cacaaaacga tcctcccgac
      481 acgcttccac aagatatcaa tagagaaaca ccgcgagatg gtgtcggtaa cgttcaattg
      541 actccacaag aaatcgagaa acatccagca tttcacgcag ccgcactttg tagccaattt
      601 cccggcgcac ccggatgcga aggtgtaata gttccagagt caatgatacc tccttctcct
      661 taacccctca acttttttta ttattatttt atctgtgtat ataacaaaaa aaaactacaa
      721 taaacggcat ataataatat tccaaagatc gttgttgtat tttttgttat attacaaaaa
      781 aaatatttta tgactgtaac taaaaaataa taatacggga taaggtggat acagtggaca
      841 tacctgcact ctgataaaat ttttttattt tcttgttttg tcttattgtc aagacatatt
      901 ttacgcacga aattaaacta aaaatactaa aaacagaatt gtgtaataaa agagagcata
      961 taatattcgc ccgatgacca ttgtctgcat tttttagaat tattatttgt tttttgggaa
     1021 actttgtgta taaaccattc aacatcatct tatataaaaa ttgttctata tctttttagt
     1081 tgatagttat ggtaaaatac tgcattatac atatctagga aattatgtaa ccaatgatct
     1141 atttttctat tcttttcttt cttacgtttg tttttcttgt ctttttatgg ttgcattgaa
     1201 taccttagta tattcttgct ccatgaattt gattgaagta gacttagacc gctcttgata
     1261 ttttggcggt tcaggattta ttgtttctgc tgttagtaga aggaagtact atctctccta
     1321 ctgttttatt atttagttct gatttcaatt ctattccttt gactattcca ctttgtccat
     1381 tatcatcgta aagaatttta ttttcaggtt ggcttattaa aaatgcatta aatcggtcac
     1441 taagaaattt aattgattct tgcaaattat taatctgttc atctttctct tgtaactttc
     1501 catttataac atattcttga accttgtttt tatcagatag ttccattatc tttttagata
     1561 atttattttc atctgaaatt gtcaataaat ctacagcatt aagataatca tgtaaaactt
     1621 ccttttctgt tggtttataa tacgatttgg atacaccaat attgtgaccc agtaaaagtt
     1681 caatgtttat tgatttcatt cctgcatttt cacatattgt tttgaatgct ttacggaagc
     1741 catgcatcat tttaaattca tgtctggagc catctccatt ttctttatcc agttttttta
     1801 ttatctgttg tgaacgtaat gctctataga ttatattttt tatttcaccg acacttaatt
     1861 attgtggatt ggaagcaagc cgtatttgac ctccgtgtgt aggcaaatct gttacctgcc
     1921 atatatctcg catgaaccag gattctccgg atatattttc accatgagaa aaacgaaagt
     1981 ccatccattc cttcagataa ttccatgcct ctggagtgac aaaggtatag tattcctctt
     2041 catcaccagg ataaaccaat aattttgcag cgatgatatt tactcttttt tcttgtaatt
     2101 ccttatatgt atcattaata tttttagtat aaaaccaaag acttgtcata gttcctatct
     2161 ctttttttgc ttgttcaatt tcttcatttg tcatcatatc ttgatttggt tccatcaaac
     2221 taattgtagt tgtcgaattt ttaggtgcaa cttcaatcca ttttgtattt ttatatggat
     2281 attcaccttt gatatcaaat ccaagttttt gagtatagaa ttctacagcc cttgtttgat
     2341 ttgaaacaaa tattactatt cctccaatac catcaatcat gtaaatagga aaattaatca
     2401 taattataac ttttatctat atactgttaa tagttaaacg gttttaaatc attattatat
     2461 tgtagtctcg caagaatatt tgaaaaaaat ttaagagtgc ttagtatgaa tttatgtgac
     2521 acgtttttat agtttggaat aatattttta tacatcgtat taatctataa tatctatatg
     2581 cttatatagt aactttaatt gagatatttt aatgaattat ttttttctag tcattttttt
     2641 atcaattgtt ttagtaattt ttaatacaca tactcattct ttgtttgcag agcaacaaaa
     2701 tttaaaaact aatagtaatt atcaactatc tttaaatttc tcttcacaac aagaaaaaga
     2761 attattttta caaaaatggt taaattttag tccttccaaa gaaatcaaag aagttccaaa
     2821 aacacaaata actttggcaa tttacacatt aaatgattta gtaaatgaat tagttactgg
     2881 tgttaaactt gaaaatataa ctactgttcc aaatcaagtt aaagtaaatg atatatttga
     2941 ggtaaatgct actgtgagaa atacattacc atttaatgta acaattattg cgggaaattg
     3001 taattctgat ttctctacaa acttttataa taacgtagaa gaaatagagg ttccacaatg
     3061 tatgaataga gttttaccaa cagtactaga accacgagat aaagtcaccg ttcaagaaag
     3121 tagtggaata ggtaaacaat ataatgccgt ggcagaaggt gaagcgaatg gaactgctat
     3181 tttatcatat agtatagaag tcaaaccaga aggttttctg gagacaacat cattaaaagg
     3241 tcaagtagtt caaccattta gttttactat acttccataa actaactatt tcaaataatt
     3301 agaatgtact attaaataaa taaattctcg gagtgggact cgaaccctta ttcatcaaat
     3361 gtgggttcta ttttcagata ttaa
//
LOCUS       DATIAS010000454         2222 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1853319, whole genome shotgun sequence.
ACCESSION   DATIAS010000454 DATIAS010000000
VERSION     DATIAS010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853319"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1176
                     /locus_tag="VLA74_09115"
     CDS             175..1176
                     /locus_tag="VLA74_09115"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSF50905.1"
                     /translation="MIKTSNRKEFSSAFIIPHYAGGYEQEQGRKKLFIAETIEGLFSQ
                     TDEDWCAIVVVDMTPNEATHDYLIHLKQKYYPKIDVIFLERNVGAGVSRNLGVLKALE
                     RGHSIILFNDSDDISHPKRLEVVKKILLENPHIDVVYSTFEVIDENNRLKPTEKISSP
                     ILEILESHLQNPLEGNDIWIKMGTETGITNITSSTAVRIKFAYQCPFPDEKASEDFHS
                     WMRMSAFGANFKYTSLIPTKYRIPNFIKYQASRTRIGINNFNQIKARVDSDAFSKATE
                     IALARNIIKPEEIPMLKSKFYKRLAKSMKREMENELADELLNKAAQLEYESFVYLNK"
     gene            complement(1314..>2222)
                     /locus_tag="VLA74_09120"
     CDS             complement(1314..>2222)
                     /locus_tag="VLA74_09120"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF50906.1"
                     /translation="IIETIEPSWEGTVAEEAHYLMYKELLEKEYGSGNGIVWDNTWHC
                     FSYLSAKKFPKMKIIHTNHGTIELQKVPVKQLRFPRYIGLSRLHAKYMSSFLKIPVRY
                     VHHGIPLPPIEETKNNNKNGDYLLSINRIVREKGIEDSIDLAVRTRNAIKIAGDDIHV
                     PDLSYVQMIREKCQNTDGLAEYIGLVDNKTKTELIKKCKAVISCPKPTWIEAFGLYAV
                     EANAYGKPVLALANGGLKDIIVNQTNGFLAKTPRELQKYVQKVYECSPESCRRRVEKL
                     FTDEIMTKNYLHIFERIMEDEPAFRW"
BASE COUNT          742 a          370 c          353 g          757 t
ORIGIN      
        1 ataatatata acaagcccag actgtgatat gcaattttcc tatgatataa tatttatgta
       61 gatgtgtttt aaatacctaa agactataat acttatgtct tgtgaaacta ttcttttaga
      121 gttttaaatt aaattaatta attggtagtc tagataacta ccaaagagat taaaatgata
      181 aaaacaagca atagaaaaga gttttcaagt gcatttatta ttcctcatta tgcaggtgga
      241 tatgaacaag aacaaggaag aaaaaagcta tttattgctg agacaatcga aggattattt
      301 tcacaaactg atgaagattg gtgtgcaatt gttgtagttg atatgactcc taatgaagca
      361 acccatgatt atttaattca tttaaagcaa aaatactatc caaaaattga tgtcattttt
      421 ctagaacgaa atgtaggtgc tggagtaagc aggaatttag gagtactcaa ggcattagaa
      481 cgtggtcatt ctataatact tttcaatgac tcagatgata tatctcatcc aaaaaggtta
      541 gaagttgtta aaaaaatatt attagaaaat cctcatattg atgtagttta ttctacgttt
      601 gaagtaatcg atgaaaataa tagattaaaa cctaccgaaa aaatttcttc cccgatttta
      661 gaaatcttag aatctcattt gcaaaatcca ttagaaggca acgatatttg gataaaaatg
      721 ggaacagaaa ctgggattac taatataacc tcttctacag cagtacgtat aaaatttgcc
      781 tatcaatgtc ctttccccga tgaaaaagca tcagaagatt ttcattcttg gatgagaatg
      841 tccgcgtttg gagccaactt taagtatact tccttaatcc ctactaaata cagaatacca
      901 aattttataa aatatcaagc ttcaaggaca agaataggga taaataattt taatcaaata
      961 aaagcgagag tagatagcga tgctttttct aaagctactg aaatcgcatt agcaagaaat
     1021 atcataaagc ctgaggaaat accaatgctt aaatcaaaat tctataaaag attggccaaa
     1081 tctatgaaac gagaaatgga aaatgaacta gctgatgagc tcttaaataa agccgcacaa
     1141 ctggaatacg aaagctttgt ttaccttaac aaatagcttg tgttgcaact atgactaggc
     1201 aatcatggaa aagatataaa aacaatattc tgcttttttc atttatctat ttattttaaa
     1261 ttcatactag gatagtcaag ccatagtgtt agtaaaacaa ttacctactt ttactaccat
     1321 ctgaacgcag gctcatcttc cattatcctt tcgaagatat gaagataatt cttagtcatt
     1381 atttcatctg taaatagctt ttcaactctg cgtctacaag attctggcga acattcgtaa
     1441 accttctgga catatttttg taactctcta ggagttttag ctagaaaacc attggtttgg
     1501 tttacaatta tatcttttag tcctccatta gctagagcaa gtactggttt accataggca
     1561 tttgcttcta cagcatatag tccaaaggcc tctatccagg taggtttcgg gcatgaaatt
     1621 acagctttac atttcttgat taattctgtc tttgttttat tgtctacgag tccaatgtac
     1681 tctgccaagc catcggtatt ttggcatttc tctcttatca tttgtacata tgaaagatcc
     1741 ggtacgtgta tatcatcacc agctattttt atagcgtttc ttgttctcac agctaaatct
     1801 attgaatctt caattccttt ttctctgact attctattta tcgagagaag ataatctccg
     1861 tttttattat tattttttgt ttcttctatt ggaggtagag gtattccgtg atggacatat
     1921 ctaactggta ttttaaggaa ggacgacata tatttagcat gaagcctcga tagtccaata
     1981 tatctaggaa atcgcaactg tttaaccgga actttttgca attctatcgt accatgattg
     2041 gtatgaatta tcttcatctt tggaaatttc tttgcagaga gataggaaaa gcaatgccat
     2101 gtattatccc atactattcc atttccactt ccatattctt tttccagtag ttccttgtac
     2161 atgagatagt gtgcttcttc agcaaccgtt ccttcccaag aaggttcgat cgtttctatt
     2221 at
//
LOCUS       DATIAS010000455         2651 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1853388, whole genome shotgun sequence.
ACCESSION   DATIAS010000455 DATIAS010000000
VERSION     DATIAS010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853388"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..498)
                     /locus_tag="VLA74_09125"
     CDS             complement(79..498)
                     /locus_tag="VLA74_09125"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF50907.1"
                     /translation="MNFFFFFFWSDCKCTLFYVTPIIHTPFIIGTISLKSKKTGETIA
                     LREYIKELHHEIKENAIKMLDKKIKKYEKMDDSISLNSKVIIGEPADEIIKFANNKRI
                     DLIIMGTTGLSGIKKFVFGSIARNVSEKANCPVMLVR"
     gene            complement(441..590)
                     /locus_tag="VLA74_09130"
     CDS             complement(441..590)
                     /locus_tag="VLA74_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50908.1"
                     /translation="MITYNNILVPYDNSKISDTAFDHAMTIAKMSSISSSSSSGQIVN
                     VHYFM"
     gene            complement(782..937)
                     /locus_tag="VLA74_09135"
     CDS             complement(782..937)
                     /locus_tag="VLA74_09135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50909.1"
                     /translation="MSAINFKRGFGLGDVSRKKLSSFAECWKGIGIIVGIWAVFYFGI
                     AVATGKI"
     gene            complement(1153..1920)
                     /locus_tag="VLA74_09140"
     CDS             complement(1153..1920)
                     /locus_tag="VLA74_09140"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF50910.1"
                     /translation="MVNEKSNILLLGISIVEDILAITILGILQSVAIQDISGGEGAGE
                     VNILTIAVSLVIVGLFIGGILIFGSRYITPLIDKIGKTNNFALFLLSILGLAFGLSLS
                     AQLLGLSIATGAFLAGVLVAESKHASLARVITVPLRDLFAAVFFISVGMLMEISAIGS
                     FIVPALLLIITSFVSKLFIVTGILIKAKYNNITALRTGLGMSMAKGELSLVVVKIGYD
                     SGIITSFLLPLVGVVTMITTFITPYVIKFGKQLGKTY"
     gene            complement(1910..2299)
                     /locus_tag="VLA74_09145"
     CDS             complement(1910..2299)
                     /locus_tag="VLA74_09145"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF50911.1"
                     /translation="MIVAAIVLLVTYKLKQPMVIGYILVGIIGPHTPPFSYITDLEAI
                     NAIAELGIIMLLFVIGTEFPIAKLRSVGKISAIVALSETLGTLVISFVVTQTLNFSFY
                     DSLFIALAMSITSTVITIRVLQELYGK"
BASE COUNT          971 a          402 c          330 g          948 t
ORIGIN      
        1 ataatataat tttaccattc ttaataaaaa tttggagact ggtatttctt taaaactaat
       61 aatttatgtc tttaatcgtt atcgaaccaa cattactgga cagtttgctt tttcagatac
      121 atttctagca atactaccaa atacaaactt tttaattcca ctcaatccag tagtgcccat
      181 gataataagg tctattcttt tattattagc aaattttatt atttcgtctg ccggctcgcc
      241 aattataact ttggagttta aggatatgct atcatccatc ttttcatatt ttttgatttt
      301 cttatcaagc atttttattg cattttcttt tatttcatga tgtaattctt ttatatattc
      361 acgtagtgca atagtttcac ctgttttctt tgattttaat gagatagttc caatgataaa
      421 tggagtatgt attattggag ttacataaaa taatgtacat ttacaatctg accagaagaa
      481 gaagaagaag aaattgatga catttttgca attgtcatag catggtcaaa tgcagtatca
      541 gatatttttg aattatcata tggaactaat atattattat aggtaatcac ttattattgt
      601 catgaatata tttacataaa gagaatatta cctttattat aactaaattg atttcttaat
      661 acgtctattt tataatacat ctataattat aataaatgta aaaaaaagag attaagttat
      721 agtactttta acttgtttcc aactatgctg ttgtattatt tttgtttttt ttttatttac
      781 attagatttt tcctgttgct actgctatgc caaaataaaa tacagcccaa atacctacaa
      841 taatgcctat acccttccaa cattcagcaa atgacgataa ttttttccta ctaacatcac
      901 ccagaccgaa tccccttttg aaatttatgg cactcatatt gctattacta ttataatagt
      961 ttttgtaact tctaaatgta ataaatttta gtatagtttt actaaacaaa ctaataataa
     1021 tacaaactta aaaagtatca aattgtatta tccatttgaa ttattataaa aaaaattaaa
     1081 ttgaatttct taaaggaaat aattattagc agtaactagc gtttgatgca tcagataaaa
     1141 attataaata ttttagtatg tttttcctaa ttgctttcca aatttgataa cataaggtgt
     1201 tataaatgtt gtaatcattg ttacaacccc tactaaaggc aataagaatg acgtaattat
     1261 tcctgagtca tatcctattt ttactacaac taaagataat tcgcctttag ccattgacat
     1321 tcctaatcct gttcttaatg cagtaatatt attatatttt gctttaatca aaatcccagt
     1381 tactataaat aatttagata caaaagatgt tataataagt agcaatgcag gtacaataaa
     1441 agatcctata gcagaaattt ccattaacat tccaacagat ataaaaaata ctgcagcaaa
     1501 taaatccctt aacggaacag taattactct agcaagagaa gcatgttttg attcagcaac
     1561 taacactccc gccaggaaag caccggtagc aatggataat cctaataatt gagcagaaag
     1621 tgatagacca aaagctagtc ccaagataga gagtaagaat aatgcaaagt tatttgtttt
     1681 tccaattttg tctataagtg gagtaatata tcttgaacca aatatcaaaa tgcctcctat
     1741 aaataaaccc actattacaa gagatactgc tattgtcaag atatttactt caccagcacc
     1801 ttcaccacca ctaatatctt gtatagccac cgattgtaaa atcccaagaa tagttatagc
     1861 aagaatatct tcaactatag atattcctaa tagtagaata ttagactttt catttaccat
     1921 aaagttcttg caatactctt attgttatta ctgtgctggt aattgacatt gcaagggcaa
     1981 taaataaaga atcataaaaa gaaaaattca aagtctgggt tacaacaaat gatataacaa
     2041 gagttcctaa tgtctcagat aatgctacta ttgcagatat tttacctact gatctaagtt
     2101 ttgctatagg aaattcagta ccaataacaa aaagtaacat aataattcct aattctgcaa
     2161 ttgcattaat tgcttctaga tcagttatgt aactaaaagg tggagtatga gggccaataa
     2221 tacctactaa aatataacca ataaccatag gttgttttaa cttgtaagta acaagaagta
     2281 caattgcagc aacaatcata attattgcaa aatcttatac aaagaattgt gatggtgcaa
     2341 gatatgtagg aacttcaaaa tttgttgaaa acattatatc taatcaccat ctaataataa
     2401 atatacaatt acagtatctt aatgattatt tatttgaatc tatttaaaaa tgacaactag
     2461 gttgaacaat actgttaatc tatatacatt attttttatc acaagaaagc aaaaactttt
     2521 catgatgatc ttaacaattt agatattaag gttgttttta ctgatggtgt tccattctgt
     2581 actttatgcc agatagatga ttgtgcacat acagattttg ctatatgtgc aaaacaaaat
     2641 cttcttggtt a
//
LOCUS       DATIAS010000456         3843 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1853658, whole genome shotgun sequence.
ACCESSION   DATIAS010000456 DATIAS010000000
VERSION     DATIAS010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3843
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853658"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(342..896)
                     /locus_tag="VLA74_09150"
     CDS             complement(342..896)
                     /locus_tag="VLA74_09150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50912.1"
                     /translation="MSSAKKDDVKENINQFKETTERYLEHPKQQYKDTSSNLAQTTEK
                     INESVNKFQDDNRRIFEKNADTFRNYQEQISKTTQEASYNIIELQKNIFNTYQSSYSQ
                     FLNNINKSYWQNFKIPERYSETYNTLSKNIQDSTVNTTNFINEIFVCNVENVKKSLEL
                     TQRYYDDTMRITSNYIRKIESQYN"
     gene            complement(1451..1861)
                     /locus_tag="VLA74_09155"
     CDS             complement(1451..1861)
                     /locus_tag="VLA74_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50913.1"
                     /translation="MKLLLFPLITIVVFALNTLPEHITIYAIKPIAQVSPECGKLSDH
                     RVNFTVNGFNRDGNVYWKFINSTGFVDPYGYFATNNTGGFDDYVIADDIYPDDYVISF
                     FDDKNNDYMKDDNGVEVNVTYSIPCKSPLLDKFN"
     gene            complement(2163..2360)
                     /locus_tag="VLA74_09160"
     CDS             complement(2163..2360)
                     /locus_tag="VLA74_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50914.1"
                     /translation="MSVVTCRKCEAEIVVSQPDKVHTLADRKVLNWKDYVKSTNKCRR
                     CGTVNIFYWSKPKEEENDEEF"
     gene            complement(2842..3297)
                     /locus_tag="VLA74_09165"
     CDS             complement(2842..3297)
                     /locus_tag="VLA74_09165"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSF50915.1"
                     /translation="MNDLTIEREIIIDASIEKVFGAITNADQLTQWFPDVAILEPKEG
                     GDVMFTFLKEKSCISGKNLDKNYRVVGKVIKIIPNKELSYTWQHKDIPDFPETIVSWK
                     LERLDEDKTKLILTHTGFTDKDKQEYNGHSEGWSWFITRLQNYVTKEDP"
     gene            complement(3290..3595)
                     /locus_tag="VLA74_09170"
     CDS             complement(3290..3595)
                     /locus_tag="VLA74_09170"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSF50916.1"
                     /translation="MELPWKAISDDSRRQILLLLKKKDMTPSEIAQHFKFTFPAVSSH
                     LRILKSSDLIRERKIGKNRIYSLNREKTSEMMKFFAGMWEYNLSSLKELLENDQKDE"
BASE COUNT         1304 a          547 c          534 g         1458 t
ORIGIN      
        1 gagagtccac caatattttg agaatagaat tgagtctttt gattactatt atcgtgtatg
       61 caagaggatt gtaatctatt acatgtatat aactggatac aattctttgt ctctttgtat
      121 aatgacacaa taattgaaac ttattttata gttgagatgc aagatagatg aatttatctt
      181 tagttaatag agccaaatta aacccattat tgatgatgag catattttta atctaataac
      241 aaacaccaat gcagaattag gttttttcag atcattttca agttatgaaa tttgattaag
      301 cataaaaaga aaaaagaaaa aaattattta ttttttattt atcaattata ctgactttct
      361 atctttctta tgtaattgga agtaattcgc attgtatcgt cgtaatatct ttgtgtgagc
      421 tctaatgatt tctttacgtt ctcaacatta catacaaaaa tttcatttat aaaatttgtt
      481 gtgtttactg tactgtcttg tatgtttttg cttaacgtgt tatatgtttc agagtatctt
      541 tctggaattt tgaaattttg ccagtatgac ttgtttatat tgttcaagaa ttgagaatat
      601 gatgattgat atgtgttaaa gatatttttt tgtaattcta taatgttgta agatgcctct
      661 tgtgtagttt tgctgatttg ttcttgataa ttcctgaaag tatctgcatt cttttcaaag
      721 attcttctgt tatcatcttg aaatttattt acgctttcat taatcttttc tgtggtttga
      781 gctagattgg aggatgtatc cttatattgt tgtttcgggt gttcaaggta tctttctgtg
      841 gtttccttaa attggtttat attttctttt acgtcatctt ttttagctga agacatacac
      901 taaatattgt tttgagggat attaacatta ataccattga ctatgtattt ttcatttata
      961 ttatatagac aattgtctaa caacttgtat aacatacagt aagatgattg tgaaagtaat
     1021 agctgtcatt aaagtcaaag gaaaatcgta ttaatatttg aaaattttta tcgtctataa
     1081 aaatgatcaa tacaaattaa tattgaatag aatgactcaa gttgagcgca atgagtggaa
     1141 ttttaacata atacctttta tttttaaact gatatactgc ttatatgatt gggaggatag
     1201 tcaactgatt ttgagaaaat tttctggttc acaaaaagtc gaaattaatc taaataacag
     1261 tcattatcac atctcataag cgtcaaccaa gcgtttaata ttatatactt tattattagt
     1321 gaaatatcag atttgacaaa aaatgtcaaa ataatgtcat ttaaaaaaat ttttcagaat
     1381 agtagaaaaa aacgagaaat ttgattacga gccattaatt aatacaaaaa taatttggaa
     1441 ctaatccatt ttaattaaat ttatcgagta gaggtgattt acatggtatg gaataggtta
     1501 cgtttacttc gaccccatta tcatctttca tataatcatt atttttatcg tcaaaaaaac
     1561 ttattacata gtcatcagga tagatatcat ctgctattac ataatcgtca aaaccaccag
     1621 tgttatttgt agcaaaataa ccgtatggat caacaaatcc tgttgaatta atgaatttcc
     1681 agtaaacgtt gccatctcta ttgaatccat ttactgtgaa attgactcta tgatctgaca
     1741 attttccaca ttctggagag acttgagcga ttggtttaat agcataaatc gtgatatgtt
     1801 caggaagagt atttagtgca aaaacaacta ttgtaatcaa tggaaaaagc aaaagtttca
     1861 taagtttttc tgtgtatcgt gtattttaaa tattactttt tggttttaaa ggaaacatct
     1921 cataattaaa gaaaatgaaa aggaaataca attataaaaa aaatcttcct gttccttggg
     1981 aacctatctc tttagagaaa gaaaattaac tatttaccag ataatagaaa attattccta
     2041 ttatctttgt gatatggctt ctaacctatt agatatgctt cagaattaat cctactaata
     2101 ttcttgttaa gtagaaaaaa tttttttacg aataaaaatg gctatagaat tataataatt
     2161 aattagaact cttcatcatt ttcttcttct tttggtttac tccaataaaa aatgtttaca
     2221 gtaccacatc ttctacattt gttcgttgac tttacataat ctttccagtt taacaccttt
     2281 ctatcagcta aagtatgcac tttgtccggt tgggagacaa caatctctgc ttcgcacttc
     2341 ctgcaggtaa ctacactcat gatggtaata caatatgctt ttgctaccca tgtatctatc
     2401 tttgttatta aaaattcaag ttttagttaa catcaaagga tttagatcaa tataacctta
     2461 aataaattcc attataaaaa aataaactac attgtgataa ttacatttat ctaacatcta
     2521 tatgagcaac ttaacttcca tttccggaac gaagatcctg agtaatttat tttatccctt
     2581 gtactccgaa attaccaaaa aaatgatgat atactaaata tcgttggaat gatggattaa
     2641 tgagtcaaaa aaaggaaaag gatatttgtc gtttgcaaat aagtcagtta ttttctagag
     2701 atttccaatt catctgttgt gactgtaaac tctataatga caatggtaga aaatgtcgat
     2761 cataatattt tatatccata atacaagtac aaaaacacaa aatttctgta attggttcag
     2821 gacatcaaat tctccatatt gttatggatc ttctttagtt acatagtttt gaagtcttgt
     2881 aataaaccaa gaccatccct cgctatgacc gttatattct tgcttatcct tatccgtaaa
     2941 tccagtatga gttaaaatta acttagtttt gtcttcgtct agtcgttcta atttccagga
     3001 aactatggtt tctggaaaat ctggaatatc tttatgttgc catgtgtaag aaagttcttt
     3061 attaggaata attttaatta cctttccaac aacacgataa ttcttatcta aatttttacc
     3121 tgaaatacaa gatttttctt ttaagaaggt aaacattaca tcccctcctt ctttcggttc
     3181 caatatggcc acatcaggaa accactgtgt taattgatct gcgttagtga tagcaccaaa
     3241 taccttctca atcgatgcat ctatgattat ttctctttcg atagttagat cattcatctt
     3301 tctgatcatt ctccagtaat tctttcaaac tactcaaatt gtattcccac ataccagcaa
     3361 aaaatttcat catttctgat gtcttttctc tattgagtga ataaattcta tttttaccaa
     3421 tttttctctc tctaattaaa tctgaacttt tgagaatccg cagatgagaa gataccgcag
     3481 gaaatgtgaa tttaaaatgc tgtgctattt cgctgggggt catatctttt ttctttagta
     3541 aaagtaagat ctgacgtctg ctatcatcag aaattgcctt ccatggtaat tccatataat
     3601 taattaatta aataattatt taaatgttta tgttttatgt tttaagtaaa aatttagatg
     3661 aatctagatt cttcaaacaa ataaataaga aaataattta gtagacggaa aaaagtttat
     3721 aatattacat atgagtgtca gaaccaaagt ctatactccc tgttttgtta caaaaaataa
     3781 aaagaatttt aatatgaaaa tttatagttg ttagattgaa atattctgaa tgtatatgcg
     3841 atg
//
LOCUS       DATIAS010000457         5975 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1853759, whole genome shotgun sequence.
ACCESSION   DATIAS010000457 DATIAS010000000
VERSION     DATIAS010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5975
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853759"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(658..1626)
                     /locus_tag="VLA74_09175"
     CDS             complement(658..1626)
                     /locus_tag="VLA74_09175"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSF50917.1"
                     /translation="MIKRSEIAKYVVIVFIFILIGAFISPVVTDWYNEINANLTLANS
                     NKALMRSSDFTNADLVGTDLTNADLFGTNLTNVDLGYVDLTDADLGNAILTNANLRYA
                     ILTNADLSSSDLTNAFLRFAILTYADLRFAYLTNADLFGTNLTNVDLGNANLTDAFLR
                     YADLTNADLLGSDLTNTDLRFAYLTNADLGNAILTNADLLGSDLTNADLFGTNLTDAD
                     LRVADFTNANLSYSDLTGADLFGTNLTDADLFGTNLTDANLLSSDLTNADLRGTNLTN
                     VDLINAILEKTYFTCESLTDANLINSIDLQKVHLFDSNMNEVSNCD"
     gene            complement(1837..2766)
                     /locus_tag="VLA74_09180"
     CDS             complement(1837..2766)
                     /locus_tag="VLA74_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50918.1"
                     /translation="MTAKDKFISDAIEFVKLNNKPFTFKDFILKGYSHVNFNQLVRRN
                     KDDILKIGKDKYFPKILLESLIMLYSSISDNSQAQPCQKSPLDNPDDLLIYFLSQNIH
                     NIRSTLKNVTGIYSNLKDQRYQPEPNTALHEIKLEPELINFMDIQIKVFPNDTVQILI
                     GCSPNPIILNHDDIDKLTNTYEQLRQYLYNYASHVSPLDFMRITQFDNAIDAVYYKIG
                     NLNTFGMEFPTFKKHLAKIYYPAKNMIRFEQPNVNNELSINQLKHIVDTILPINFNSI
                     KPEPLPQRLKQLVVEIDILSVMRRQRLREQRFK"
     gene            3116..3316
                     /locus_tag="VLA74_09185"
     CDS             3116..3316
                     /locus_tag="VLA74_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50919.1"
                     /translation="MDNLNSKKKPYFIKKIYKSNHGTLLGLPKKLSQELKLDNETYVR
                     MYYDRENKMVLLTRILDELENE"
     gene            3973..4584
                     /locus_tag="VLA74_09190"
     CDS             3973..4584
                     /locus_tag="VLA74_09190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50920.1"
                     /translation="MIEITSTVTIISTTVAIGGGLWGLFNGLKEYGNGQEIRKKELEE
                     QQRGLTLKRQEILFPLIKEFDEGEKIFYAKELIDGVHIKLEDNNGKLKTYTKKDFPNL
                     LIRNDNDYTKPLDEDEIRIRLIIDSLLNFFGKLGYLMDNELITKKEINYFFYYIERAI
                     YDESIITFAKNLDYELFAILLEKIGMIPSDLKPLVQKYNNRLK"
     gene            complement(4894..5727)
                     /locus_tag="VLA74_09195"
     CDS             complement(4894..5727)
                     /locus_tag="VLA74_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50921.1"
                     /translation="MTSEENKTRHRLTLKYFIFSMIIAIIIANTIVIFSESHSKHSIS
                     LWILNITAATASILGIISICRYGIHGLHGKSYLFLTLGLISWFSADFTLLYNYYALGI
                     EEQRLVTTTDALWFTGYGFLALHLIIILRSLHIKIKSIVFVVISIITALFISYNIVNL
                     LSYDFHTDDDFIAIIVTVLYPILDFILIIPSAIILITLRKDYEQNIPWFLSSLSLLVN
                     AIADDGYVNDFVTGNLENLWFWELFYITDFIIMSGALFWYNKFHISNAQRNVKLSNHH
                     K"
BASE COUNT         2173 a          764 c         1025 g         2013 t
ORIGIN      
        1 tatcaatgct gcgggtatag acatatagaa ttgagaatca aaggcaaatc tgaaatgaaa
       61 taggagatta atccggctgt attaacaagg aataagatag tgatccatcg ttgacttagg
      121 cggcgtgctg cataatgaat atacgtgaaa gtcagctaaa tagtttaggg aaagaatggg
      181 aagggatgaa acccaatctt accctagtga aagtctctca cctacgataa aggtcgccgt
      241 aacgggatta ggtgaaatag tcgttattga gtaagagaac caagaattga tcttataaca
      301 agtaatattt tcgtaaaatc aagggaaaat atccggcaat aattgtatat aaggcttcct
      361 catctaatat atgagaatga taacctagaa actctactta tctaaaggag aagataatga
      421 aggtaaagac ggtttttctc gtatagtttt tgagctcgta cagtattcga agcagatcta
      481 aaggtttgtt gaattatgat taatgaatta atgcagcgtt gaccgttgga gcgtgaactc
      541 ataacagttg gtgcgttgtt gtagaccacc actttaaagg agaataatgc tcattagaat
      601 actattcact tgaaccatat tcccttgttg cgttggtcgc ctataatcaa tagtatttta
      661 atcgcagtta gagacttcat tcatatttga atcaaagagg tggacttttt gtaaatctat
      721 gctattgata agattagcat ctgttaaact ttcacaagta aaataagttt tctctaatat
      781 tgcattaata agatcaacat ttgtgaggtt tgtaccacga agatcggcat ttgtgaggtc
      841 tgaacttaaa agattagcat ctgttaggtt tgtaccaaaa agatcagcat ctgttaggtt
      901 tgtaccaaaa agatcagcac ctgttaggtc tgagtaacta agattagcat ttgtgaagtc
      961 tgcaacacga agatcagcat ctgttaggtt tgtaccaaaa agatcagcat ttgttagatc
     1021 tgaacctaaa agatcagcat ttgttaggat tgcattacca agatcagcat ttgtgaggta
     1081 tgcaaaacga agatcagtat ttgttagatc tgaacctaaa agatcagcat ttgttagatc
     1141 tgcataacga agaaaagcat ctgttaggtt tgcattacca agatctacat ttgttaggtt
     1201 tgtaccaaaa agatcagcat ttgtgaggta tgcaaaacga agatcagcat atgttaggat
     1261 tgcaaaacga agaaaagcat ttgttagatc tgaacttgaa agatcagcat ttgttaggat
     1321 tgcgtaacga agattggcat ttgttaggat tgcattacca agatcagcat cggttaagtc
     1381 tacataacca agatccacat ttgtcaggtt tgtaccaaaa agatccgcat ttgttaggtc
     1441 tgtaccaaca agatcagcat ttgtgaagtc tgaacttctc attaaagctt tattagaatt
     1501 agctaatgtg agattagcgt ttatctcgtt ataccagtcc gtaactacag gcgaaataaa
     1561 agcacctatt aaaatgaaaa taaagactat tactacatat ttagcaattt cactgcgttt
     1621 aataatagta agagactatc aaaatattta ataatttttt tctcttattc ctttcaaatt
     1681 tttaggtcat tccttttaag atatagaagt ccaatataaa gacgaaaact agaacatttg
     1741 ttctaaagaa cacttgttca attattcgat tgttgtggag gctaagggag ttgaggtaac
     1801 tgtgttcggc gttggcgtta gtgcctgaat cgttgatcac ttgaaccgtt gttcacgcaa
     1861 gcgttgcctt ctcataacac ttaaaatatc gatttctacg actagttgtt ttaatcgttg
     1921 tggcagtggt tcgggtttta ttgaattaaa gttgatcggc aagattgtat cgactatatg
     1981 ttttagctgg ttaatactaa gttcattgtt gacattgggt tgttcaaatc gaatcatgtt
     2041 ttttgccgga taatagattt tggctaaatg ctttttgaaa gtaggaaatt ccataccgaa
     2101 tgtgttcaag ttacctattt tgtaatacac tgcatctatt gcattatcga attgagttat
     2161 acgcataaag tcaagtggac taacatgaga agcatagtta tagaggtatt ggcgaagttg
     2221 ttcgtaggtg ttggtgagtt tgtcaatgtc atcatgatta agtattattg ggttgggaga
     2281 acaaccaatt agaatttgga ctgtgtcatt agggaatact ttgatttgaa tatccatgaa
     2341 gttaatgagt tctggttcaa gttttatctc gtgtaaggct gtgttgggtt cgggttggta
     2401 acgttgatct ttgaggttgg agtatatgcc tgtaacgttt ttgagggtgg agcggatatt
     2461 gtggatgttt tgggatagga agtagattag gaggtcgtcg gggttgtcta gaggggattt
     2521 ctgacaaggt tgtgcttggg agttgtcaga aatggaggaa tacagcatga taagagattc
     2581 taatagtatt tttggaaaat atttatcctt accaattttt aatatatcat ctttattcct
     2641 tctcaccaat tgattgaagt taacatgtga atatcctttt agaataaaat ctttaaatgt
     2701 aaatggctta ttgtttagtt ttacaaactc tattgcatca ctgataaatt tatctttagc
     2761 agtcatttca ctatttctcc attattcgtt ttcttttaat cgtttgaaaa tgaatttgtc
     2821 acatcatggt ctaaaagtgt gacaaaatga gcatgaaaat taggtattgt tttaaggtca
     2881 gtatcaagca ttttgagagg atcattctga ttgaataagc caacaagatt agagggttcg
     2941 aaatgagtag aatataaact tattttgaaa caaagatgat ttttgagtaa aaatgaaggg
     3001 ctcgtactaa tcctcataac atttatagat ttcatagaat tagtgaaaat tatgaatata
     3061 tgggaacttt ctaatcctta tacttctctt aggattactt ggtgtacatg atattatgga
     3121 taatttaaac agcaagaaaa aaccatattt tattaaaaaa atatacaaat caaatcatgg
     3181 aactttgtta ggactgccga aaaagttatc acaggaattg aagctagaca atgaaactta
     3241 tgtaaggatg tattacgatc gagaaaataa aatggtgtta ttaacaagaa tacttgatga
     3301 attggagaac gaataacatg ctgcaatcaa ttgaggaatt aataaatgat aaactgaata
     3361 aattacacaa aatccatata gctaaagcaa tgcctaaagc atttgcaaca taatatttga
     3421 caaatgggca aagatgacat atacgaatca agcaacttat agaatttgtt aaatcttttt
     3481 taggtgtgaa tgatgatgaa ttgatattaa atgctattga agatatgaga gaaacaaata
     3541 agatcatcat agtggaacgt aaaggtcatc attttattac aagatggatt taagttaatt
     3601 ttatttttca atacttaccg attaaaaact ttaaataaat cgataataat caatatttta
     3661 aattttcaag tttttattat cttttttaac aaaattacca attcatgaat ccataatact
     3721 agcattatga gaaccaccta actcacgttt gtggtatata caataatggt ataaatgatt
     3781 taagaaactg aatgtaattt tagaataata ttcaaataat tcttccgatt ttataacttc
     3841 gtagaattaa caaattctat taatctgtct aatattgcct tttgaaattc atatctaaat
     3901 tccctcggaa tattgtttaa atttaacagt caggttgaag gattatattt tcactcaggc
     3961 tttttatatt aattgataga aataacatct acagttacca tcatatcaac aacagtcgct
     4021 attggaggag gtttgtgggg attgtttaat ggattgaaag aatatggaaa tggtcaagaa
     4081 ataagaaaaa aagaattaga agaacaacaa agaggattga ctttaaaaag acaggaaata
     4141 ctatttcctt taattaaaga attcgatgaa ggtgaaaaga ttttctatgc aaaagaatta
     4201 attgatggtg tacatattaa attggaagat aataacggaa aattaaaaac ttatactaaa
     4261 aaagatttcc ctaatcttct gattagaaat gataatgatt atacaaaacc gttagatgaa
     4321 gatgaaatac gtataagact tattatagat agtcttctta atttttttgg aaaattagga
     4381 tatttgatgg ataatgaatt aattactaaa aaagaaataa attatttttt ttattatatc
     4441 gaaagagcaa tatatgatga atccatcatt acatttgcaa agaatttaga ttacgaatta
     4501 tttgctattt tgttagaaaa aattggaatg attcctagtg atttaaaacc tttagttcag
     4561 aaatataata atcgtctaaa gtaatttagt taataatcta ttttattatg acaaaaattc
     4621 ttgattattc agttctaatc cctttgagcg tttgaaatac ttttatttac taactttaca
     4681 aaacaatttt aaaataagtt tctaataata aaaactaaat acaagatagt aatatctcta
     4741 cagtagactc ttaatttagc accgctatcg gtattaattt tgccgatgag tttctaaata
     4801 tatttataat tatctaattc aagggtattg ctattatata ttagttatag actaatacat
     4861 aaaaaatact gataaaagtt ttaacagatg taattattta tgatgattgc tcaattttac
     4921 atttctttga gcgtttgaaa tatggaattt attataccaa aataatgctc ctgacattat
     4981 aataaaatct gttatataga aaagttccca aaaccaaaga ttttctaaat taccagttac
     5041 aaaatcatta acatatccat catctgctat tgcattgact aataatgata aggaagaaag
     5101 aaaccaagga atattctgtt cataatcttt cctcaatgtt ataagtatta ttgcagaagg
     5161 tatgattaat ataaagtcta aaataggata caaaacagtt actattatgg ctataaaatc
     5221 atcgtcagta tgaaaatcat aagaaagaag attaactata ttataactaa taaagagtgc
     5281 tgtaataatt gatattacaa caaaaactat ggattttatt ttaatatgta aagagcgtaa
     5341 tattataatc aagtgtaaag caagaaaccc atatccagta aaccataaag catcggtagt
     5401 agttacaagt ctttgttctt ctattcccaa tgcataataa ttatataaaa gtgtaaaatc
     5461 agcagaaaac caagatataa gaccaagtgt aagaaacaaa tatgatttac catgaagtcc
     5521 atgaattcca tatctacaga tagagataat acctaaaatt gaagcagtag ctgccgttat
     5581 atttaatatc caaagagaaa tagaatgctt actgtgtgat tctgaaaata ttacaatagt
     5641 atttgcaatt attatagcta ttatcattga gaaaataaaa tactttaatg ttagtctgtg
     5701 tctagtctta ttttcttctg aagtcaaagg ttattgacaa taacaaaaca ttttctagat
     5761 tttaaagatt cgtttacaat ttaattaaaa taattataat ttcaaaatag aaattgaatg
     5821 actacataaa actagagaaa tttttatgta attacaagta aacaatcaca atatgtgaaa
     5881 ttagtaattt agtataatat tttaaatttc caaagtaatt aaaaaataag ttcccgataa
     5941 taaaagctaa gtatgatgca atagaatcct attac
//
LOCUS       DATIAS010000458         2886 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1173054, whole genome shotgun sequence.
ACCESSION   DATIAS010000458 DATIAS010000000
VERSION     DATIAS010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1173054"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VLA74_09200"
     CDS             <1..490
                     /locus_tag="VLA74_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50922.1"
                     /translation="ECRINSEDPFDDFSPSVGYVPTCNIPNGPGVRVDTYLYPGCNVS
                     GYYDSLVAKLITYGSDFEEARLCMRNALSEFNIEGINTTIPIHKTIIEEQNFINGNMS
                     TNYIEKYDIMQKMLQRRSLEYESKSHAAVSALLLQSEYVKKYYSDQNQDKIIHNSSRG
                     NV"
     gene            490..1005
                     /locus_tag="VLA74_09205"
     CDS             490..1005
                     /locus_tag="VLA74_09205"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HSF50923.1"
                     /translation="MEFQLEGESGLIKAEVIRNKGSGEMIFRINDKDYELKLLKSSTS
                     GFEFILGNTFHDVKILHSDGPKYKVYVDGVNIEIKKHSKLLTEIIEKSLKSKGSISQA
                     NIVKSQIPGRVVKISGSKGEPIKEGDPIVILESMKMQVAIKAHKNGLLKEIKVSEGST
                     VSRYEVVAIIE"
     gene            complement(1431..1904)
                     /locus_tag="VLA74_09210"
     CDS             complement(1431..1904)
                     /locus_tag="VLA74_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HSF50924.1"
                     /translation="MEHQISLKIGDIAPDFEIPDINLKNMRLSDIKDKKVILAFFPAA
                     ESPVCTAEMCNFRDSVSEFNNKNVQVIGISVDGPFANKSFTENRHLNFPVLSDYKRDV
                     IKNYGVVMNDLAVLKDYNAAKRSIFILDKDKKILYKWISDNPLIEPNYDEIRQNL"
     gene            complement(1946..>2886)
                     /locus_tag="VLA74_09215"
     CDS             complement(1946..>2886)
                     /locus_tag="VLA74_09215"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HSF50925.1"
                     /translation="SKFYRDKDKDKNHIITSVMEHDAILETCRELESDGFDVTYLEVG
                     REGIVNPETIKRFLSKRTILVSIMLVNNEVGTVQPVGKLAEITHEYNKNIIFHTDAVQ
                     GVGKIPIDINNLNVDSLSISSHKINGPKGVGALYVRNEIEFKPLIHGGGQEYGLRSGT
                     ENVHGIIGFGKACEISLKNLKKNCEFLTNLRNYLIEKILSEVSGSRLNGSVDKRIPSN
                     TNFTFFGINGEDLIIKLDEYGILASTGSACSINKKKASHVLKAMGLDHEEISGSVRFS
                     IGIQNTKEELDKTIEILVKRVEELREISPFKSKYSL"
BASE COUNT          992 a          465 c          411 g         1018 t
ORIGIN      
        1 tgaatgccgt ataaattcag aagacccatt tgatgatttt agcccctccg taggatatgt
       61 gccaacttgt aatattccaa atggtccagg agtacgagtt gatacttatc tatacccagg
      121 atgtaacgtg tctggatatt atgattcgct agtagcgaaa ttgataacat acggaagtga
      181 ttttgaagaa gcccgacttt gtatgagaaa tgcattatca gaatttaata ttgaaggaat
      241 taataccact attccaatac ataagacaat tattgaagaa caaaatttca ttaatggaaa
      301 tatgtctaca aattatattg aaaaatatga cataatgcaa aaaatgctac agagaagaag
      361 tctagaatac gaaagtaaat cgcacgcggc tgtgtcagct ttattactac aatcagaata
      421 cgttaaaaag tattattcag atcaaaatca agacaaaatc atacataatt ctagtagagg
      481 taatgtctag tggaattcca acttgagggt gagtctggtc ttattaaggc agaagtaata
      541 cgtaataaag gttctggaga gatgatattt agaataaatg ataaagatta tgaactaaaa
      601 ctcttgaaat cgagtacatc tggttttgaa tttattttag gcaatacctt tcatgatgta
      661 aaaattttac attctgatgg accaaaatat aaggtttatg tggatggggt caacatagaa
      721 atcaagaaac attcaaaatt attaacagaa attattgaaa aatctcttaa atcaaaaggt
      781 tccataagtc aagcaaatat tgttaaaagt caaattcctg gtcgtgtggt taaaatttcc
      841 ggttccaagg gagaaccaat aaaggaggga gatccaatag tgattttaga atcaatgaaa
      901 atgcaagttg ctataaaggc ccataaaaac ggtcttttaa aggaaatcaa agttagtgaa
      961 gggtcaacag tatcaaggta tgaagttgtt gcaataatag aataatagac aaatatgatt
     1021 ttcttcatat tatttttaaa atcccctatt tatgattatg actaattcaa aacaatcaat
     1081 taaaatacaa tatttggaga aagaaataac ataagtattt gcatttgatc aattacaatt
     1141 ataaaagaaa aaattcatgt aggtggaaat tatacctttt caatgttaaa agttggttag
     1201 caagtatata acatgcgtcc gaaaatctcg tgcagttata atttatttgg ttttctcata
     1261 atatatattg acaacgttat tcaaaactca ccataataca aaatttttgt aatttcaatg
     1321 aacttttaaa aactgtgata ttatctaaat aacatagtta tcgattttat gttagaattt
     1381 taaaaatttc tcagaatttc aaagaattag caaaaataat ataaaaattt ttatagattt
     1441 tgccttatct catcatagtt tggttctatc aaaggattat cagaaatcca tttatataat
     1501 atttttttat ctttatctaa aataaagatt gacctttttg cggcattgta gtcttttaat
     1561 acagctaaat cgttcataac tacgccgtaa ttctttatta catctcgttt atagtcactt
     1621 aatacaggaa aattcaaatg gcgattttca gtaaaggatt tatttgcaaa tggtccgtct
     1681 acagaaattc caatcacttg aacattttta ttattgaatt cactcacaga gtctctgaaa
     1741 ttacacatct ctgcagtaca cactggggat tctgctgctg gaaagaatgc aagtattact
     1801 ttcttatctt taatatcact caatctcata tttttcaaat ttatatctgg tatctcaaaa
     1861 tctggagcaa tatcccctat tttcaaactt atttgatgtt ccatattgct atagatattt
     1921 taacaatctc aataataaat tttttctata aagaatattt tgatttaaac ggagatatct
     1981 ccctcaattc ttctactctt tttactaaaa tctcgatcgt tttatctaac tcttctttcg
     2041 tattctgtat tcctattgaa aatcttacag agcctgaaat ctcctcatga tctaggccca
     2101 ttgctttcag aacatgagat gctttctttt tgtttataga acatgcagaa ccagttgaag
     2161 ctaaaattcc atattcatct aactttatta ttagatcttc tccgtttatc ccaaaaaacg
     2221 taaaattcgt attgcttggg attctcttgt caacggatcc atttaaacgc gaacctgaca
     2281 cctcactgag gatcttctca atcagatagt ttctcaaatt tgttagaaat tcacaatttt
     2341 tttttaaatt ttttaaacta atttcacagg cttttccaaa ccctattatt ccatgtacat
     2401 tttcggttcc agatcgtaat ccatattctt gtccacctcc gtgtatcaaa ggtttaaact
     2461 ctatttcatt tctgacatat agtgcaccta ctcctttagg tccatttatc ttgtgtgaag
     2521 atattgacaa agaatcaaca ttcagattgt taatatctat cggaatttta cctacaccct
     2581 gaaccgcgtc agtatgaaaa ataatgtttt tgttatattc atgagttatt tcagctaatt
     2641 ttccaactgg ttggacagtt ccaacttcat tatttaccaa cattatgctc actaaaattg
     2701 ttcttttact tagaaatctt ttaatagttt cagggttgac tataccttct ctaccgactt
     2761 ctaaatacgt aacatcaaaa ccatcacttt ctagctctct gcaagtttct aaaattgcat
     2821 cgtgttccat gacgctggtg atgatgtgat ttttatcttt atctttatct ctgtaaaatt
     2881 tgctca
//
LOCUS       DATIAS010000459         3991 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_83218, whole genome shotgun sequence.
ACCESSION   DATIAS010000459 DATIAS010000000
VERSION     DATIAS010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3991
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83218"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            233..1633
                     /locus_tag="VLA74_09220"
     CDS             233..1633
                     /locus_tag="VLA74_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HSF50926.1"
                     /translation="MLSLKFKTINPTTEEIVNEYENMSYENIDKTVIKAKNAFNTWKE
                     NFKKRDIYLHSFATEFRKNKEHLAKVATMEMGKPIKEARTEIEKCAWTMEYYADNGQV
                     FMTDEIVNTDARKSFITFEPLGVIASIMPWNFPYWQALRFAAPSLIAGNTIVLKPASA
                     TVQCGLEIEKIFNKVGLPEGVFQTVVGNSNIAEYLIDSDNVNAVTFTGSVPVGSKVAQ
                     RATSQLKKTVLELGGSDPFIVCDDADIDKASAGAVKGRFINCGQSCIASKRFFVVKKV
                     ADEFIEKFTQNTKKLHVGDPLDENTDIGPLITLQSLEFIHEVIHSSIKDGADLLLGGE
                     RLSRKGYFYEPTILKNVTPKMRVAKEETFGPVAPITIVENEMEAIKFANESEFGLGAS
                     IWTQDLDKAERLSRLVQSGIVTVNSVVVSDPRVPFGGIKNSGFGRELSKYGLFEFVNI
                     KSVRFYDQLIRNHHVE"
     gene            complement(1722..2597)
                     /locus_tag="VLA74_09225"
     CDS             complement(1722..2597)
                     /locus_tag="VLA74_09225"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSF50927.1"
                     /translation="MHFHFSNGSQIKNLKLVLILTSSFISVEVLAGFLLNSLVLIADA
                     GHMFIDICGLFLAWFAIKFSQKPPTPQKTYGFYRFEILAALINGIIVSLLSSYIIYEA
                     YRNFFYFEKTLDSISIISIGIFGLIINLIGISLLQKDAKTNLNIEGAYLEVIKDAIGS
                     AGIIITGIIIFFTNFSLIDPIVSVILVLFIIPRIWSLVKKSIHILMEGVPTNISYEKV
                     KKSILEIKGVTGVFDLHIWTISSNLDALTAHVVISDKSKSDLILREIMSLLDKKFNIS
                     HSTIQIETYHETDSN"
     gene            2894..3796
                     /locus_tag="VLA74_09230"
     CDS             2894..3796
                     /locus_tag="VLA74_09230"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSF50928.1"
                     /translation="MNVIMIFINPINALLWSIRRDQRDVINLYNVLSPLMYITTGSTM
                     LNFGYWSDEIRKPDEAQMNLCKITGEMAELDTARNLVDVGSGLSSPAIWWKNRYNSLD
                     LYCININYNQQVIANKIKDNYFNSKKSRRYCKDICLINSASHSLPFKKESIDRIICLE
                     AAQHFKPLTNFITQTRYILKPKGIMVIAVPVITKLFNPVKNLLKLGILSFSWASEHYL
                     LDYISSVIINEKFKVIDIVKIGPHVYSPLAEFYIKNRKKLKYKICREYHPVLEYILYR
                     SILKMDKLSRDKIIEYVIIKCVKM"
BASE COUNT         1509 a          556 c          678 g         1248 t
ORIGIN      
        1 ttaaaatact agtgatacaa ttgtaaagga aaaatagtgt atttttattg atattgaaat
       61 ttactaatca tcatgaaaaa tcttaacttg gacatacacg caggaaatga gaacaggttg
      121 tttacagaac ttgacagaga actaaaaata aataattaat ataaaatcaa actgtattat
      181 atcctgaatt cctcataaca atttatataa gcatattttg actattgaat agatgttatc
      241 attaaaattc aagacaatta atcccactac ggaagaaatt gttaatgaat acgagaatat
      301 gtcatatgaa aatattgata aaactgtgat taaagctaag aatgcgttta atacttggaa
      361 ggaaaatttt aaaaaaagag atatttatct gcattctttt gctactgaat ttaggaagaa
      421 taaggagcat ctagctaagg ttgcgacaat ggaaatggga aaaccgataa aagaagcaag
      481 aacagagata gaaaaatgtg cttggaccat ggaatattat gctgataacg gccaagtgtt
      541 tatgactgac gagattgtta atactgatgc aagaaagagt tttataactt ttgagccatt
      601 aggcgttatc gcaagtataa tgccatggaa ttttccttat tggcaagctt tgagatttgc
      661 tgctccttcg ttaatagcag gaaataccat agtacttaaa cccgcaagcg caactgtcca
      721 gtgtggctta gaaattgaga aaatatttaa caaagtcgga ttaccagaag gagtgtttca
      781 aactgtagtt ggaaattcca atatcgcaga atatttgata gattctgaca atgttaacgc
      841 ggttacattt acaggaagtg ttccggttgg ttccaaagta gcacagagag cgacatctca
      901 gctaaagaaa acagtattag aacttggagg cagcgacccg tttatagtat gtgacgatgc
      961 tgatattgac aaggcatccg caggagctgt gaaggggcgt tttataaatt gtggtcaaag
     1021 ttgtattgca agcaaaagat tctttgtagt aaaaaaagta gcagatgaat ttattgaaaa
     1081 atttactcaa aatacaaaaa aactccatgt tggagatcca cttgacgaaa ataccgacat
     1141 aggaccattg ataactctcc agagtctcga gtttatacat gaagtaattc atagctctat
     1201 aaaggatgga gcagaccttt tattgggtgg agaaagatta tctagaaagg gctatttcta
     1261 tgaaccgact atactaaaga atgtcactcc aaaaatgcgc gttgcaaagg aagagacttt
     1321 cggtccagta gcaccaataa caattgtaga aaacgaaatg gaggcgatta aatttgccaa
     1381 cgaatcagaa tttggacttg gagctagtat atggacacaa gatctagata aggccgaacg
     1441 actatctaga ctggtgcaat ccggaattgt gactgtcaac agtgtagtag tatcagatcc
     1501 gcgagtccca tttggaggta taaagaatag tgggtttggt agagaattat caaaatatgg
     1561 gttatttgaa tttgtaaata taaagtctgt gagattctat gatcagttga tacgtaatca
     1621 ccatgtagaa taagatttga aaaggtaata taaaattcag gaagaaagca agaaataact
     1681 tataggaaaa aaattaaaac aaaaaaaaag aaccaacttt tttaatttga atctgtctcg
     1741 tgatacgttt ctatttgaat agtgctatga gagatattga atttcttgtc taatagtgac
     1801 attatttctc ttaatattaa atctgattta ctcttatcac ttataaccac atgagccgtt
     1861 aacgcatcca gatttgaaga tattgtccaa atatgaagat caaaaacgcc tgtcacgccc
     1921 ttgatttcca agatagattt tttaaccttt tcgtatgata tatttgtagg aacaccttcc
     1981 atcaatatat gaatcgactt cttaacaagt gaccatatac gaggaattat aaataatacc
     2041 aaaataacac tgacaattgg gtctattaaa gaaaaatttg taaaaaagat tataattcca
     2101 gttattatta taccggccga acctatcgca tctttaataa cttcaagata tgctccttct
     2161 atattcaagt tagttttggc gtctttttgt aataacgata ttccaataag atttattatc
     2221 aaaccaaaaa ttccaataga aattatagat attgaatcta atgtcttttc aaaataaaaa
     2281 aagttacgat aagcctcgta aataatatat gatgataaaa gtgatactat tattccgttt
     2341 attagtgcag ctagtatttc aaatctatag aatccatagg ttttctgcgg tgtaggaggt
     2401 ttttgtgaaa actttatggc aaaccaagct agaaacaaac cacatatatc aataaacata
     2461 tgccctgcat cggctatcaa aactagacta tttaataaga acccggctaa gacctcaaca
     2521 gaaataaaag agctggttaa tatgagaact aattttaaat tctttatctg agatccatta
     2581 gaaaaatgaa agtgcacgac aatatactag ggatatgaaa caatatctgg ctttctaatt
     2641 tcctaattag tatcattcta ggtttatgca gtccttttca gttataatgg aacaaaaaag
     2701 taattgatga aatatatttt aatgatttga gagaaaatac tagtcatttc attcaggatg
     2761 gatggcccaa tctataacat agaacgagaa gtgactaaaa tcacaatatg attgctcaaa
     2821 aaacgaagta ataaaaaata aactttatac gaacaaatat tacaaacgat tattaatttt
     2881 ataaatctct aaaatgaatg taattatgat ttttattaat ccaattaatg ctttactatg
     2941 gtcaattaga cgagatcaaa gagatgtaat taatttgtat aatgttctat ctccactaat
     3001 gtacattacc acaggaagta ctatgttgaa ttttggatat tggtctgatg aaattagaaa
     3061 gcctgatgaa gctcaaatga acctatgtaa aataactggg gaaatggcag aacttgatac
     3121 agcaagaaat cttgtagacg tgggaagtgg tttatcgtcc cctgccatat ggtggaaaaa
     3181 tagatataat tctttagatc tctattgtat taatatcaat tataatcaac aggtgatagc
     3241 taataaaata aaagataatt attttaattc aaaaaagtca agaagatatt gcaaggatat
     3301 ttgtctaatt aatagtgctt ctcatagttt accattcaag aaggaatcga ttgatagaat
     3361 aatttgttta gaggcagcac aacatttcaa accgttaact aattttatca cccaaacaag
     3421 atacatctta aaaccaaaag gaataatggt tatagctgta ccggttataa cgaaattatt
     3481 caatccggta aaaaatttat taaaactagg tattttatct tttagttggg catctgagca
     3541 ttatttatta gattatattt cgtcggttat aataaatgaa aaatttaaag taattgatat
     3601 tgttaaaata ggtcctcatg tctattctcc attggctgaa ttctatatta aaaacagaaa
     3661 aaaattaaag tataaaattt gtcgcgagta ccatcctgtt ctagaatata ttctatacag
     3721 atctatatta aagatggata aactatcaag agataaaatt attgaatatg ttataatcaa
     3781 gtgtgtcaaa atgtgattct ttaattatat gtgcctagta acagatttaa cgtgtttcta
     3841 aaaatatttt atatcatgtg gcaatcacaa taacaatcgt tagaagatta aatacacaaa
     3901 tatgcagatt taggtaatat taggttaaca ataaacttac caacttttct tgatcttggg
     3961 taaagcattc tattttaact aaattagtcg t
//
LOCUS       DATIAS010000460         3768 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1446882, whole genome shotgun sequence.
ACCESSION   DATIAS010000460 DATIAS010000000
VERSION     DATIAS010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3768
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446882"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..232
                     /locus_tag="VLA74_09235"
     tRNA            158..232
                     /locus_tag="VLA74_09235"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:193..195,aa:Met,seq:cat)
     gene            361..1122
                     /locus_tag="VLA74_09240"
     CDS             361..1122
                     /locus_tag="VLA74_09240"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSF50929.1"
                     /translation="MRDLYNRKARLDYWIDRIDKDLDDGNDRTDVLKFVEIMQEKDQS
                     ILTIIRCITAILQLRKQLEKPYSKVTKDDIKLLFRWMDSKQYKVETHEKYRAVLKKFY
                     KMIYGNGERYPDCVSWFSVNVGKDKKSQERNIDINEYLEKEEIKTLIESAPTIQKKAF
                     LATCYETGARPEEHLRLSNLDCKIDTNGIVMILRGKTGERRVRIVSFAPLLQQWLEIH
                     PLKNQKQFPLWISTATNNRKATGIKSRRIHNQGST"
     gene            1214..1639
                     /locus_tag="VLA74_09245"
     CDS             1214..1639
                     /locus_tag="VLA74_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50930.1"
                     /translation="MCIFFGWQHGTKVVRRYIHLSGKDLDNTLLSIGEGKPVIKEDEY
                     QLKIFKCNRCSETLSPTMQFCGRCGLPTKLAQQYTKEMELEEEKEKKDQELLIMKKQL
                     DDIQKQVSTLILSLATLKDQDQLNQTAKILYDAKILNTQ"
     gene            complement(1640..2146)
                     /locus_tag="VLA74_09250"
     CDS             complement(1640..2146)
                     /locus_tag="VLA74_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50931.1"
                     /translation="MKDSKTRNEIRYTIVDELLRKFVTNCILSFNLHVNERLKYAYVY
                     DLFSVIKKENHDLLKKGEAIKEYKKYMKIWYGTSSKTCGSFDMMNKRKQELNIKKDER
                     FELTRHFKKIIGDWDKIIRDRHIFDEEFKNVNEKYRSLLDKYGSIVDIFLELLFPDFL
                     REIWKRKR"
     gene            complement(2296..2748)
                     /locus_tag="VLA74_09255"
     CDS             complement(2296..2748)
                     /locus_tag="VLA74_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50932.1"
                     /translation="MRTWNNEIGKKIIKIVYEHRLDGIGYNKLKRNSGYAKNTIDRWL
                     NRLRNFGIIKQTPKYPIYMTKKAIQEYEKNSLFIPYDVRRRQKNIWSEKEKKSIIHIL
                     SLMTIGVYKPRYNIPKSSTGLYRYRNKRYPFYLHKSIIKDKTTNILYL"
     gene            2811..3056
                     /locus_tag="VLA74_09260"
     CDS             2811..3056
                     /locus_tag="VLA74_09260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50933.1"
                     /translation="MYEIIIIPQKEGKKLNCQRCGHFWIYTGLNQFICSCPHCRTTIT
                     INKKNKKNPLHDEVRVGGSAQHAMVIENHTNGCDSYG"
     gene            3049..3492
                     /locus_tag="VLA74_09265"
     CDS             3049..3492
                     /locus_tag="VLA74_09265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50934.1"
                     /translation="MDSHKHNEEIKPFPKDVNNSTLSNLINIQRIDNRSLEVAIVTIC
                     LTSNHDECNGIYIDSFSRKYLIKCLCKCHIEKSKKEKDKKRDRNSDNVESQKLPNNLC
                     NSTRNNVKPYSSISDDICSCGHNRSSHWNLDQCKDKVCNCSEFLP"
     gene            3489..>3768
                     /locus_tag="VLA74_09270"
     CDS             3489..>3768
                     /locus_tag="VLA74_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50935.1"
                     /translation="MTTHDSNNIINKGTSFYFIPLQLGKKLQDEEIIHSFVKDPRTNS
                     IILELNHKYDKTKVIVSINTKKWENFQKSIEETLKDKDIGISDKHIRLI"
BASE COUNT         1396 a          568 c          577 g         1227 t
ORIGIN      
        1 attgaaatta gaatagaatc tctagttatc aaatgggagg taaaattaat ttaagctgac
       61 agcacctact aaaaatacag agaatagctt ttgagaggat catattaata gaatatatat
      121 cagaattaaa ataagaggaa ataacgctgc tgagcttgcc ggagtggctc agcttggtta
      181 gagcgttcga ctcataatcg aaaggtcgcg ggctcgaatc ccgcctccgg cattgagtcc
      241 tcgcttcgaa tccctaccta caaccaaaac aaggaaacct ttattataga agaatttgaa
      301 acgaaaaaat taccgtatag taataagcaa ccatctccca tactaaacac acatctagaa
      361 atgagagatc tttataatag gaaagcaaga ctagattact ggattgatag aatagataaa
      421 gatcttgacg atggaaatga tagaacagat gttttaaaat ttgtagaaat tatgcaggag
      481 aaagatcaga gtattttaac tattattaga tgtatcactg caatacttca attaagaaaa
      541 caacttgaaa agccctattc aaaagtcact aaagatgata taaaactact ttttagatgg
      601 atggatagca aacagtataa agttgaaact catgaaaagt atcgtgccgt tttaaaaaag
      661 ttctacaaga tgatttatgg aaatggtgag agatatccag attgtgtatc atggttctca
      721 gttaatgtag gtaaagataa aaagagtcag gagagaaata ttgacattaa tgaatattta
      781 gaaaaagaag agatcaagac attgattgaa tcagcaccta ccattcagaa aaaagcattt
      841 ttagcaactt gctatgaaac aggtgcacgt ccagaggagc atctgagact ttccaatttg
      901 gactgtaaaa tagatacaaa tggtattgtt atgattctta ggggaaaaac aggagagaga
      961 agagtcagaa tagtttcatt tgctccatta ttacagcaat ggttggaaat tcatccacta
     1021 aaaaatcaaa aacaatttcc attatggata tctactgcaa ccaataacag gaaagccact
     1081 gggattaaaa gcaggagaat acataatcaa ggaagcactt aataaagcag gtctgaatga
     1141 taaaaggagc aggttataca tcctaaggca tagccgggca agtcacttat gccaattttt
     1201 aactgaagca caaatgtgca tattcttcgg atggcagcat ggaaccaaag tagtcagacg
     1261 ctatattcat ctctcaggta aggatcttga taatacgtta ctatcaattg gcgagggaaa
     1321 acctgttata aaagaagatg aataccagtt aaaaattttc aaatgcaata gatgttctga
     1381 aactctcagt ccaacaatgc agttttgcgg tcgttgtggt ttacctacaa aattagcaca
     1441 gcaatataca aaagaaatgg aattggaaga agaaaaagag aagaaagacc aagaactact
     1501 tattatgaaa aagcaacttg acgatataca aaaacaggta agcactctga tattatcttt
     1561 ggcaacccta aaagatcaag accaacttaa tcaaacggca aaaatattgt atgatgcaaa
     1621 aatattgaac actcaataat tacctttttc ttttccatat ttctctaaga aaatcaggaa
     1681 ataacagttc tagaaaaata tctacaatag atccatattt gtcaagtaga gacctgtatt
     1741 tctcattaac atttttaaat tcctcatcaa agatatgtct gtctctaata attttatccc
     1801 aatctccaat tattttttta aagtgtctag taagttcaaa tctttcatct ttttttatat
     1861 ttagttcttg tttacgttta ttcatcatat caaaagatcc acaagttttt gaacttgtac
     1921 cataccagat tttcatgtat tttttgtatt ccttgatcgc ttctcctttt tttaaaagat
     1981 catggttttc ttttttaatg acagaaaata gatcatatac atatgcatat ttcaatctct
     2041 catttacatg tagattaaaa gacaatatac aatttgtaac aaattttctt agtaattcat
     2101 cgacaattgt atatcttatt tcatttctag ttttactatc tttcattttc aaacgtttta
     2161 ttattggtgg attatgttta agtaatttga caaaaatttg ttgtgcttct tctagagtaa
     2221 gactaaggta tccaaataac tgatatttac catgattgat tctactgttg tttgataaat
     2281 atgctctctt attttttaaa gatacagaat attagttgtt ttatctttta taatagattt
     2341 atgcaaatag aaaggatatc ttttatttct atatctatat aatcctgtgc ttgatttagg
     2401 tatattatac ctaggtttat acacacctat tgtcattaaa gataatatat ggataatact
     2461 ttttttctcc ttttcactcc aaatgttttt ctgtctccgt cttacatcat atggaataaa
     2521 taaggaattt ttttcatatt cttgtatagc ttttttggtc atatatattg gatattttgg
     2581 agtttgtttt attattccaa aattccttaa acgattaagc catctatcaa tagtattttt
     2641 tgcataacca gagtttctct ttaatttatt ataacctata ccatctaacc tatgttcata
     2701 tactatctta ataatttttt ttcctatttc gttattccat gttctcattt tgaggtgtcc
     2761 tactaatgat taaataaaat ttttctttta aggtcttata tactgaatgt atgtatgaaa
     2821 taatcatcat tcctcaaaaa gagggtaaaa aactgaactg tcaacggtgt ggacattttt
     2881 ggatctatac aggacttaat caattcatat gttcatgtcc acactgcaga actactataa
     2941 caatcaacaa gaaaaataaa aaaaacccat tgcatgatga ggttcgagtt ggaggctcag
     3001 ctcaacatgc aatggtaata gaaaaccaca ctaacggatg tgattcctat ggatagccat
     3061 aaacacaatg aagaaattaa accttttcct aaagatgtaa ataattcgac actatcaaat
     3121 ctaatcaata ttcaaagaat agataacaga tcattagaag ttgcaatagt aactatctgt
     3181 cttacttcta atcatgatga atgtaatgga atatatattg attcttttag tcgtaaatat
     3241 ctcattaaat gtctatgtaa atgtcacatt gaaaaatcaa aaaaagagaa agataaaaag
     3301 agagatagaa attctgataa tgtagaatcc caaaagctcc ctaataattt atgtaattca
     3361 acgagaaaca atgtcaagcc atattcttct atatcggatg atatatgttc ctgtggtcat
     3421 aatagaagtt ctcattggaa tttggatcaa tgtaaggaca aggtttgtaa ttgttcagag
     3481 tttttaccat gacaactcat gattcgaata atataatcaa caaaggaact tctttttact
     3541 ttattccttt acaacttggc aaaaaactac aagacgagga aataattcat agttttgtca
     3601 aggatccaag gactaacagt attattttag aacttaacca taaatatgat aaaactaaag
     3661 ttattgtttc aataaataca aagaaatggg aaaactttca aaaatcaatt gaagaaacgc
     3721 tcaaagataa agatatagga atcagtgaca aacatattag actaataa
//
LOCUS       DATIAS010000461         2398 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1580997, whole genome shotgun sequence.
ACCESSION   DATIAS010000461 DATIAS010000000
VERSION     DATIAS010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580997"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..215
                     /locus_tag="VLA74_09275"
                     /pseudo
     CDS             104..215
                     /locus_tag="VLA74_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558050.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
     gene            complement(653..928)
                     /locus_tag="VLA74_09280"
     CDS             complement(653..928)
                     /locus_tag="VLA74_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50936.1"
                     /translation="MIKSLKYLRSPGVLTDFLKGLLVDVSPHLEKGRLYAGEIRIIDF
                     LMEKLELAVQSDLFKIIRNDNKEEAVEILLACFESKIYDINYFRSIA"
     gene            complement(1251..1943)
                     /locus_tag="VLA74_09285"
     CDS             complement(1251..1943)
                     /locus_tag="VLA74_09285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50937.1"
                     /translation="MDKKSRVNANILLSSLLYFLFFLSVSVDSEEQNVLNATNPTILT
                     YNNENINFTDNLYNLHLQYPINWTKIYPYECPDPEGCTIDTGVPERDNLIVSFDIFND
                     SKKKIEDLEIYGDIIHQNKNLKDTLDSYSNNYIKRYLEPLKYKNHIITTLNKSNTIIS
                     DNLYWEIVFYDNYKNSLITNKHMLTIKNIDKDYWFGFKIKYSSSDSTEFYKYLPSFQE
                     MIESIKFTKEKR"
     gene            2136..>2398
                     /locus_tag="VLA74_09290"
     CDS             2136..>2398
                     /locus_tag="VLA74_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50938.1"
                     /translation="MSIKHKRKDGYWLYYHLAHTVERDTVIGNIVYLVKENPPPRPCS
                     KNVSSSSRRGRKPVHSWEKLVCICILMVIFGLTYRDMQNTVPS"
BASE COUNT          917 a          330 c          353 g          798 t
ORIGIN      
        1 tatcaagctg tattccgcta cctcaaaagt tatacaatat tacaagaaga ttgagaactg
       61 tgtagaggaa gtagagatat actttccagg atttaaagca tttatagatt caacagaaca
      121 ggagatacaa agacctaaaa ataaaagaaa gagaaaaaaa ctattactct ggtaagaaga
      181 aaaaacatac tgtaaagaca caactgatgg taaacaaaga aggaaagata ctgcataaat
      241 caaatcagca caagaaagga aaacagcata tgattattct gtctacacaa agacgaacat
      301 ccaataacac caccacagtt taaaaactat tttgatcttg ggtataaggg aatagaaaat
      361 gattttcctg accttaaagt agtattacca gtaaaaaaga aacgtaatat tgaactcacc
      421 aaaacagaaa agagatacaa caaaagacat agtagacaga gggtaatagt agaacacact
      481 atctgtagaa taaaaaaatt tggtataatg ggaaacagat acagaaacag actaaagaga
      541 tatgatataa tgtctgatat tgttcctggt ctggttaact atagaataat ccatagcaga
      601 agaagataat tgtaaaccaa taaacaatga aaacattcgg tatgttttct aattacgcaa
      661 tagatctaaa gtaattaata tcataaatct tagattcaaa acaagctaaa agaatttcta
      721 cagcttcttc tttattgtcg ttacgaataa ttttaaataa atctgattga acggctaatt
      781 ctagtttttc cattaagaaa tcaataatcc ttatttcacc agcatataat cgtccttttt
      841 ctaaatgagg agaaacatct actaaaagcc cctttaaaaa gtcagtaaga acaccaggtg
      901 atcttaaata tttaagagat tttatcaata ccatgagtag aaattatttc tttgacatta
      961 caagaataag atgatatatt tgaaattttt caccaaatga taaattcaaa gtatatatta
     1021 tcaaaacaat tgatatttaa aagacgatct gcttggttaa attacatatg tgagttcaat
     1081 aactaaaata tggtttttat aatatataac cgaaatcaat cacatgattc acctcaatac
     1141 ccatttttca aacaaaggat aaaagtttac tttgtaatta aaataaattt ttcaatcatt
     1201 tcattcaata aatatataaa aagacctcaa tacaatgatt gatcaaatat ttatcttttt
     1261 tcctttgtaa atttaataga ctctatcatt tcttgaaatg atggtaaata cttataaaat
     1321 tctgtggaat cagaagagga gtatttaatt ttaaacccaa accaatagtc tttatctata
     1381 tttttaatag ttaacatgtg tttatttgta attaatgaat ttttataatt atcgtaaaat
     1441 acaatttccc aatatagatt atctgatatg atagtattac ttttattcaa agttgttatt
     1501 atgtgatttt tatattttaa aggttccaaa tagcgtttga tgtaattatt cgaataagaa
     1561 tcaagagtat ctttaagatt tttgttctga tgaattatat ctccgtatat ttccagatct
     1621 tcaatctttt ttttactatc attaaagatg tcaaatgaaa caattaaatt gtctctctcg
     1681 ggtacgccag tatcaattgt gcaaccttca ggatcgggac attcgtatgg atagatcttt
     1741 gtccagttga tgggatattg taaatgtaaa ttatataaat tatctgtaaa atttatgttt
     1801 tcattattgt acgtcagtat agtaggattt gtagcattca atacattttg ctcttctgag
     1861 tcaactgata cagatagaaa aaacaaaaaa taaagtaaac ttgaaagtaa gatgttagca
     1921 ttaactctcg attttttgtc caatatttta tatttattgg gacactttaa tctaataata
     1981 tacattagga gtacactgac ttcattaaag ataaatacaa tcctctttat ttatttatat
     2041 ttaggttcac taggggttgt tgcctaattc agtttaacaa tcggtaaata gaatttcatg
     2101 atttttgttt tagcttagaa atagtatgtt cccttgtgag tatcaaacac aagagaaaag
     2161 atggttactg gttgtattac catctagcgc ataccgtaga acgtgatacg gttattggaa
     2221 atatagttta tctggtcaag gaaaatcctc ctcctcgtcc atgttcaaag aatgtcagca
     2281 gcagcagcag aagaggaaga aaaccagtac actcatggga gaaacttgtg tgtatctgta
     2341 ttttgatggt tatatttggt ttgacttatc gtgatatgca gaatacagta ccatcatt
//
LOCUS       DATIAS010000462         2283 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1992450, whole genome shotgun sequence.
ACCESSION   DATIAS010000462 DATIAS010000000
VERSION     DATIAS010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1992450"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VLA74_09295"
     CDS             <1..563
                     /locus_tag="VLA74_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HSF50939.1"
                     /translation="LSDDNLFVIWKCLWPDCHNCCEKQGRLPLTKDDINNISKKLGYP
                     SKPNFIRNETNIPTWEEEGNFGNLITITTMISLKRKKDEKVEDDGNPIRCRFLDKEGY
                     CQIQSDKPGVCWLYPFASWTESSNGKPVVHATFQFTGDCPGYYLSETIDDLIPILNEY
                     SIKIYNYNMSVNRTIRDGLGISNIIY"
     gene            714..1118
                     /locus_tag="VLA74_09300"
     CDS             714..1118
                     /locus_tag="VLA74_09300"
                     /inference="COORDINATES: protein motif:HMM:NF018392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sjogren's syndrome/scleroderma autoantigen 1
                     family protein"
                     /protein_id="HSF50940.1"
                     /translation="MNSSINNPSNLKTGADLLLKGGSLLDIPCSNCGGVQIRYNTKIT
                     CVNCGKETPEFRDDVGTNSLDLHYEKNEDHENQLNPNIAISGFDKIIIQKISNLLESL
                     KDDNDLLNQNTKLELIIKYMEILEKIPKILRT"
     gene            complement(1162..2226)
                     /locus_tag="VLA74_09305"
     CDS             complement(1162..2226)
                     /locus_tag="VLA74_09305"
                     /inference="COORDINATES: protein motif:HMM:NF014610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50941.1"
                     /translation="MRPAHSKSSEFIKKISKDKKTKLRAVALLSGGLDSNLAIRMIQE
                     QGVEVEAIAIKTPFCDFDCGKGCGHRVQEVAEELGVSLKTVYFGREYLKMLKNPKYGY
                     GSGMNPCIDCRSMMYMAAKDHMKKIEADFIITGEVLGQRPMSQNSNALKIIEKETGTN
                     GLIVRPLSFKKLPVTQAEKDGLIKREFLGNITGRSRKVQLKLAEKYEIINPPNSAGGC
                     LLTDPAFSKRVRDLYSHSNDIPDTNDVELLKLGRHFRLSKNNKLIVGRNKQENDMIDA
                     MKLKKDIVLKVKDYVGPTCILRAKETTEDEIEISARIGLRYSDAPKNDLSIVRIITDD
                     NEKEVKIFPMDNQHVENMRI"
BASE COUNT          752 a          394 c          329 g          808 t
ORIGIN      
        1 agttatctga tgacaacctt tttgtaatat ggaagtgttt gtggccagat tgtcataatt
       61 gttgtgaaaa acaaggccga ttgccattaa caaaagatga tattaataac attagcaaaa
      121 aactcggata tccttcaaaa cccaatttca taagaaatga aacgaatata ccaacttggg
      181 aagaagaagg taactttggt aatttaatca ctattacaac aatgatctct ttaaaaagaa
      241 aaaaagatga aaaagtcgaa gatgatggaa atcctattag atgcagattc ttagataagg
      301 aaggatattg tcaaattcaa tcagacaaac ctggcgtttg ttggttatat ccatttgctt
      361 cttggacaga atcttctaat ggaaaacccg tagtccatgc tacttttcaa tttacaggag
      421 attgtcctgg ttattatctc agtgaaacaa tagatgactt gattccaata ttaaatgaat
      481 attcgattaa aatctataat tacaatatga gtgttaatag gacgataaga gatggtttag
      541 gtatctccaa tattatttat taatctttac tgaggttaaa aaatttgata ttttgactct
      601 atgagttaga catgttaata aatagcgttt gtatagaaag cagatagatt tagatttttt
      661 tccttaaatg acattagata aactaaatat ttatgctggt gctactaggt attatgaatt
      721 ccagtattaa caatccatcc aatcttaaga caggagcaga tttattgtta aaaggaggct
      781 ctctattaga tattccttgt agtaattgcg gcggggtaca aattcgctac aacacaaaaa
      841 taacatgtgt taattgcggc aaagagacac cagaatttag agatgacgtt ggcacaaatt
      901 ctttggacct acattatgaa aaaaacgaag atcatgaaaa tcaattaaat cctaatatcg
      961 ctatctcagg gtttgacaaa atcatcattc aaaaaatttc aaatttgttg gagagcttaa
     1021 aagatgataa cgatctttta aatcaaaata ccaagctgga actgataatt aaatacatgg
     1081 aaatactaga aaaaatccct aaaattttaa gaacttaatc ctttgttttt ggattgtttc
     1141 ctgataatta gtacaaatga actaaattcg catattttca acgtgttgat tgtccattgg
     1201 aaaaattttg acttcttttt cattatcatc ggtaattatt cttactattg atagatcatt
     1261 ctttggtgca tcggaatatc ttagtcctat tcttgcagaa atctcaattt catcctctgt
     1321 tgtttcctta gctctcaata tacatgttgg accgacataa tcttttactt ttaaaactat
     1381 atcctttttt aatttcatcg catctatcat atcattctcc tgcttgtttc taccaacaat
     1441 aagtttatta tttttggaca atctgaaatg tcttcctaat tttaataatt caacgtcgtt
     1501 cgtatcagga atatcgttac tgtgggaata aagatctctt actcttttag agaatgcagg
     1561 atccgttaat aaacatccac cagcagaatt tggaggattg atgatttcat atttctctgc
     1621 taatttcaat tgaacctttc tagacctgcc tgtgatattt cctaagaatt ctcttttgat
     1681 caacccatct ttttccgctt gtgtaacagg taatttttta aatgatagtg gtcttactat
     1741 caatccatta gtacctgttt ccttttcgat gatttttaaa gcattactat tttgactcat
     1801 tggtctttga cctagaacct caccagtaat gataaaatcc gcctctattt ttttcatatg
     1861 atctttagct gccatataca tcatactcct gcaatcaatg caaggattca ttcctgaacc
     1921 ataaccatat ttaggattct ttaacatctt caggtattct cgaccaaaat aaacagtttt
     1981 cagacttact cccagttctt cagcaacctc ttgaacccga tggccacaac cttttccaca
     2041 gtcaaaatca caaaatggtg ttttgatagc tatagcttca acttctaccc cttgctcttg
     2101 tatcattctt attgctaaat tactatccaa cccaccagat aacaatgcta ccgcccgcaa
     2161 ctttgttttt ttgtctttag atattttctt tataaattca ctcgatttac tatgggcagg
     2221 cctcataacc ttttaaataa ttaatctata tttattgtta agttaataaa tataaaatat
     2281 att
//
LOCUS       DATIAS010000463         2281 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1447494, whole genome shotgun sequence.
ACCESSION   DATIAS010000463 DATIAS010000000
VERSION     DATIAS010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1447494"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VLA74_09310"
     CDS             complement(<1..467)
                     /locus_tag="VLA74_09310"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50942.1"
                     /translation="MISKQQYEAQLQHIFRLVLENKTQEEIAHELNISTRTVARYYQR
                     IEQRYGEMQRQKTDNTLFLECQLFKNRMLTLYKILEEKAASSSPNNNTTNGHEIAKCC
                     EVAAEIAINVLKMESEGIKAVKELLGAAKDVQGKNILDNLRNQSKNGYDDESN"
     gene            681..1595
                     /locus_tag="VLA74_09315"
     CDS             681..1595
                     /locus_tag="VLA74_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50943.1"
                     /translation="MLDKKIRIFSVFIFFGIAALFFPATAFSNAVANAQQEEVYSLDY
                     QEEEARDGYYYNNDNYYGEEEENNNYYTYNKDNIKKDPIVKIKKKLFVCENALNPEPS
                     FPSGEEFRCMVPTPLTDLPARPDSGQYIPCTEELCPGIDESDFAVQIFKDVATVRDLT
                     PEGIKVNLDKFHYTVAESDISKNIDFDSDSNFFPNFPIPVRGPIPTSFCFPSGFAHSL
                     QYAIATENVGILYDICVNYVGDCEGIIYAGEVKTCTVENYIYFGFNSNEPPCIRDCAT
                     TGTPTTQSNNTEGEIPNTALSVPLDSIS"
BASE COUNT          743 a          374 c          333 g          831 t
ORIGIN      
        1 atattagatt catcatcata tccattttta gattgattgc gaaggttgtc tagaatattt
       61 tttccttgta catcttttgc cgctcctagt aactctttaa ctgctttgat accttcgctt
      121 tccatcttca gaacatttat agcaatctcg gctgctactt cacagcattt agcgatctca
      181 tgtccgtttg ttgtattatt atttggtgat gatgatgctg ccttttcttc caaaattttg
      241 tacaaagtta gcattctatt tttgaataac tgacattcta aaaagagtgt attatctgtt
      301 ttctgtctct gcatttcccc gtacctttgc tctatgcgtt gataatatct cgcaactgtg
      361 cgagtagaaa tatttaattc atgggctatt tcttcttgtg tcttgttttc gagtactagt
      421 ctaaatatgt gttgcaattg agcctcatat tgttgtttgc tgatcaattt attattttat
      481 cacctactca ctgaaacctg acatattatg acacattcac atataaataa ataagatgta
      541 taataataac tttagaatat aatgtatatt atcaaaatga tataagatat tttcattttc
      601 tcttccttaa gatttacaat taatatgaaa agagattgtt tctactttac tgatatatat
      661 atagtttata ttttattacc atgctagata aaaaaataag aattttcagt gtttttattt
      721 tctttggaat agcagcactg ttttttccag caactgcatt ttccaatgca gttgctaatg
      781 cacaacaaga agaagtatat agtttagatt atcaagaaga agaagcaaga gatggatact
      841 actacaataa tgataactat tatggggagg aggaagaaaa caacaactat tatacataca
      901 acaaagacaa tattaagaaa gatcctattg taaaaataaa gaaaaagttg ttcgtgtgtg
      961 aaaatgcact aaatccagag ccatcattcc cctctggaga ggaattccgc tgtatggttc
     1021 caactccatt gactgatctt ccagcaagac ctgatagtgg acaatatata ccgtgtactg
     1081 aggaattatg tccaggaata gatgaatcgg attttgctgt tcagatcttt aaagacgttg
     1141 caactgtacg tgatctaaca cctgaaggta ttaaagtaaa tcttgacaag ttccattaca
     1201 cggtagcaga aagtgacata agcaagaata tagattttga ttctgacagt aacttctttc
     1261 caaattttcc aatacccgta cgcggcccta tccctactag tttttgtttt cctagtggtt
     1321 ttgcacatag cctacaatat gcaatagcaa cagagaatgt aggaattcta tatgatatat
     1381 gtgtaaatta tgtaggtgat tgtgagggaa tcatatacgc tggtgaagta aagacatgta
     1441 cggtagagaa ttacatttac ttcggattta attcaaacga acccccttgt attcgcgatt
     1501 gtgcaactac aggaacacca acaacccaat caaataatac agaaggagaa atacctaata
     1561 cagccctctc tgtccctctc gattctattt cctagatggt tggtatatta gtccttctac
     1621 tagtctactg atgacaaaca aaccaaacaa taaaaaaatt ttatcttctt ttttttagtt
     1681 cttctattga ttcgataata aaatatatta aaataaaata ttttgttgtt gttattgttg
     1741 cattattagt ttagtagttt catagtatgc atttgtttaa aataaaaacc ccctcacttt
     1801 cttctggaac attgttcaga gtatttttct gaataaagta atagatattt tttttgataa
     1861 gaataaaatt catgattata acaaaaataa tattcaaatt atgaagtatt ttcatgtttg
     1921 ttattgagca ataaatacaa tttcctatac ttatcatctg cttttatctt ttcttggctc
     1981 attggcccta cctgtggctt agatgctaca tttttaagag cataagatat tctatattca
     2041 acaaaatttc tataattgtc taatttctgc agagaattac attcgtctaa ccattcgtta
     2101 attatctaat aagactcttc aaaagataac tttttgataa caaccaaata agatgctaaa
     2161 atcaaatctt tttattatta ttatattatt atattatttt attattatga cctatgacta
     2221 aaactggaat taatcactca gtgtactgga atccacagtt tgaatcgcta caacctttta
     2281 t
//
LOCUS       DATIAS010000464         2852 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1992664, whole genome shotgun sequence.
ACCESSION   DATIAS010000464 DATIAS010000000
VERSION     DATIAS010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1992664"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            685..2028
                     /locus_tag="VLA74_09320"
     CDS             685..2028
                     /locus_tag="VLA74_09320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50944.1"
                     /translation="MNLQLNSNIIFLLLIFSVVLLIIGFNPTVIYSTTSNSKYDSNTS
                     HFISPLIDLDVGKISIYTYFEDITSSDNSLKLDISDIKVQIEGTDALPQSYIPDKNLP
                     EIVLLKSGNYTIKAVIKSDRFQDNGESYVDLVELDKNKIKSEKKERDIIKFIGECNSN
                     INTGQEKICILDIVINDEDLEFINKFKEEKAEVPELALVPNEAADTEEQQENTILGIP
                     PSSSGTLPLQSCSNNNDSITLFNSKYNFDAITSIAKIKKIIKPDNKELIFEIGVDGQP
                     LTEGAKLTVANSLYTGQIYSNQRSLDYEPIGFQIKRIHTGCEIIPATINNSTESEIVS
                     HVPATINNSTESEIVSNIIQPLFYNCQSIFNTDNTLSFYKIAGKIKNSEDLDKFEGEE
                     EEVRLQIEKNGKNIVTMKLIIDPNTNDSTAIEFTFDKITTECRSIGFAGFQVQNS"
     gene            complement(2384..2734)
                     /locus_tag="VLA74_09325"
     CDS             complement(2384..2734)
                     /locus_tag="VLA74_09325"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50945.1"
                     /translation="MEEGVVPRSGIDTDAMWGFSHIKGWIFGYKLHLISSTIGSIIVP
                     LAADFTTANMPDNQLYGTLTASLPLAIIGRTLYMSADPGYDDHKLYDLSNNMGFQLVC
                     PVQRYKNTPADRIN"
BASE COUNT         1078 a          375 c          420 g          979 t
ORIGIN      
        1 caaaatcaaa aataggatga aataatgaaa atatggaaaa tgatataatg attatagtaa
       61 aagagagtga tacataataa tattttttag caatagtcct atgattgtta ttgttattgt
      121 tagtattgtt acctccatct attaacggca tatttataaa caaattacaa atttttcatt
      181 attatggatt agcaaataaa aggatagaaa agaagtagga aaaaatatta tgctattttt
      241 tatagaaaga aagttgctaa tattttatgg ttagaaacag tttatagaaa aacaatattt
      301 ttttgagatt agactaaatc gtaggttatg tcaaacacta aaaatttgaa atttattaaa
      361 tgtttaaaat tgaaagtata tttttagaga tagccacttg aagtttaatt gatgaattaa
      421 tctctatatt taaaagaaat ttttgcataa tagttgccta ttaccgtcat ataatatcat
      481 atgaatttcc atcctattta tatttaacaa aagatattaa tcaatataaa tctctgttgg
      541 gatatctttg agatgatgta tctcaatgat ctgattataa ctattgtgat tcataaacaa
      601 ctacaaaaat ataattaaaa aatttcttat ttttaatagt tttcataaaa aaatttataa
      661 taatgatatt atataatatt aggtatgaat ttacaattaa atagtaatat aatattctta
      721 ctgttgattt ttagtgttgt tttattaata ataggattca atcctacagt tatatattct
      781 acaacatcta atagtaaata tgatagtaat acatcccact ttatatcacc attaatagat
      841 ttggatgtag gaaagatcag tatctataca tatttcgaag atattactag cagtgataac
      901 agcttaaaat tagatatatc cgatataaaa gtacaaattg aaggcacaga tgcattacct
      961 caatcttata tacctgataa aaatttaccg gaaatagtat tattgaagtc aggaaattat
     1021 acgataaaag cagtaatcaa atcagatcga ttccaagata atggtgaaag ttatgtggat
     1081 cttgtagaat tggataaaaa taagattaaa tctgaaaaga aagaacggga tattatcaaa
     1141 tttattggag aatgtaattc taatataaac actggacaag aaaaaatttg tatattagat
     1201 attgtaataa atgatgaaga cttagaattt ataaataagt ttaaagagga aaaagctgag
     1261 gtaccagaat tagcattagt tcctaatgaa gcagcagata ctgaagaaca acaagagaac
     1321 actatacttg gaattcctcc atcctcttct ggaacattgc cactacaatc atgttcaaat
     1381 aacaatgata gtatcacatt atttaattca aaatataatt tcgatgcaat tacttcgata
     1441 gctaaaatta aaaagataat aaaaccggat aataaagaat taatttttga aattggagtt
     1501 gacggtcagc cattgacaga aggagcaaaa ttaactgttg caaattcttt atacactggc
     1561 cagatttatt ctaatcaaag atcattggat tatgaaccta ttggatttca gattaaaaga
     1621 atacacacag gatgtgaaat tatacctgct accattaata acagtacaga atcagaaatt
     1681 gtatcacatg tacctgctac cattaataac agtacagaat cagaaattgt atcaaatatt
     1741 attcaacctt tattctataa ttgtcaatca atctttaata cagataacac tttatccttt
     1801 tacaaaattg caggaaagat aaaaaatagt gaagatttag ataaatttga aggagaagag
     1861 gaagaagtac gacttcaaat agaaaaaaat ggtaaaaata ttgtgacaat gaaattaata
     1921 atcgatccaa atactaatga ttctactgca atagaattta catttgataa aataacaaca
     1981 gaatgtagaa gtattggttt tgcaggcttt caagttcaaa attcttaatt tttaattact
     2041 aacttattgt atctcatgat ttaaattttt caattatttg aggctgggtc ataattcaat
     2101 aaagatatat cgttagaaga acagcagtac ctgatcatta tgttatgttc ctagcatgta
     2161 tttgattgct cttggattat cttttttagt tttacagtta taatagacaa gtatctgata
     2221 gagcaatact gatagtagta ctagtgaaga agtcttggta tatcctctga cagataatgg
     2281 atctattctg aatacggatt tgatatatgt tctatcaacg gttcaattga tatacttctt
     2341 agagaataga tagcctgtcc aagtttagat tcataaaatt ctatcagttt atcctatcag
     2401 caggagtgtt cttatatctc tgtactggac acactagttg aaatcccata ttgttgctga
     2461 gatcatacag tttatgatca tcgtatccag gatctgcaga catgtataat gttcttccga
     2521 ttattgcaag aggtagactt gctgttaatg taccgtacag ctggttgtca ggcatgttgg
     2581 cagttgtaaa atctgctgcc aaaggtacaa tgatagaacc aatagtactt gatatcagat
     2641 gtagtttgta tccaaatatc caacccttta tatggctgaa tccccacatt gcatctgtat
     2701 caataccaga acgtggtact actccctctt ccatagatga tttgtgccat acatgtggag
     2761 tggaccccta tttttgggaa cacttttccc attttcatat agatactact attttctttc
     2821 attaccaata tttatcacct tcttcttctt ct
//
LOCUS       DATIAS010000465         2718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_357874, whole genome shotgun sequence.
ACCESSION   DATIAS010000465 DATIAS010000000
VERSION     DATIAS010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357874"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..1932)
                     /locus_tag="VLA74_09330"
     CDS             complement(175..1932)
                     /locus_tag="VLA74_09330"
                     /inference="COORDINATES: protein motif:HMM:NF044381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50946.1"
                     /translation="MNVSRLNKIRSNNIYELFFYLSIISLLVYLVILYNNNSSSISQL
                     HIAKAYADKIFLGSGITVECPDGKSRFQVNKGGEFDVDAECQKLAEATGSVPPAKAPP
                     APAKAPPAPAKAPPAPAKITTTPPAKTTTGPGADAGKDTKLNKPPSIKIANFPKIGKE
                     NTTVTLNAGATTDPETGKQGLKYQWSQTAGVPIKKFIGGVNSPILRFALPEIPPAGGS
                     ITMQLVVTDSKGEKSVSQPPVFIAIENVNKRPIASISQITPKNENSTVTLDASGSKDP
                     DDEPLKFAWRQINPPKPKVTIENNQSAVSSFVAPNVQKDIRMQFLVNVLDGNKINGKA
                     NKTVNVIIKQVNLPPVADAGKNFVANESSIVTLNGNKTKDPDRLDKLKYLWTQVAGDL
                     LIDLRNEKTLKPSFKVPFVKQNNSLFTFKLTAIDQKGLNSSDTVNMTVRKISNITTNP
                     PTVKAVKNLIVPEGTNATLSAAKSTDPDANEKLTFQWKQIGGQPIVDLRNANKATAEF
                     TAPVVEENTTLTFNVTATNKKGLNDTVTTFVKIANIPEQGFPIIYAIIGGVAAAGAAA
                     VVIIYKFFMVRPTGPGRAL"
     gene            complement(1919..2668)
                     /locus_tag="VLA74_09335"
     CDS             complement(1919..2668)
                     /locus_tag="VLA74_09335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50947.1"
                     /translation="MNKIKQVITYNIRKSIISIIVLFILFIVAYCYDEYILLDLQEQL
                     VPSVYSQSPCGSTTHLSLKNPLDRFPPSDHPIKIDNPTFTRDQLLNIKITGNPTTQLC
                     YNPYAKTYYTVDKTPLTVEITSEILNFKKVMKVNPLNLERNPMIGLIGGVDGILEPLQ
                     SSDCPPKPKDPNTSFNCSWNKTNLTITEKDQDLLLGTSKENQNGIVIISQKPKGNANN
                     PEPAEIIKACGENKPTKYSLPQDSVIELECK"
BASE COUNT          820 a          423 c          474 g         1001 t
ORIGIN      
        1 atttcaggaa tggaataaaa tattattaaa atcaacaaca aatatacaaa aaaataataa
       61 ttctgttagg attaaatttt ttctttttat tatatataca tcttttcttt atagtaacat
      121 ataacttgat taatataaaa aaagaaaggg aaagaataag aaaaaatcaa gaaatcatag
      181 tgctctccct ggtcccgtag gtcttaccat aaagaattta tatattatta ctacagctgc
      241 tgctcctgcg gcagccactc ctccaattat tgcatatatt attggaaatc cttgttcagg
      301 aatatttgca atttttacaa atgtagtaac agtatcattc aaaccttttt tattggtagc
      361 cgtaacatta aacgttaagg tggtattctc ttctacaaca ggtgctgtaa attcagctgt
      421 agccttgttt gcatttctta aatcaactat aggttggcca ccaatttgtt tccattgaaa
      481 agttaatttt tcattagcat caggatctgt acttttagct gcacttagtg tagcgtttgt
      541 accttctgga actatcaaat ttttaacagc ttttacagtt ggtggatttg ttgtaatgtt
      601 tgaaatcttt ctgacagtca tatttacagt atctgaacta ttcaagcctt tttgatctat
      661 agctgtaagt ttgaatgtaa aaagagagtt attttgtttt acaaatggga ctttgaatga
      721 tggttttaat gttttttcat ttcttagatc tattaataaa tctccagcaa cttgggtcca
      781 tagatatttt aatttatcaa gtctatcagg atcttttgtt ttattaccat tcaaggtaac
      841 aatagagctt tcatttgcta caaagttttt gcctgcatcg gctacaggag ggagatttac
      901 ctgtttgatg attacattga ccgtcttatt ggcttttccg tttattttgt ttccatcaag
      961 aacatttact aaaaattgca ttctgatatc tttctgtaca ttaggtgcaa caaaagaaga
     1021 tactgcactt tggttatttt caatagtaac ttttggtttt ggaggattaa tctgccgcca
     1081 tgcaaatttt agtggctcat catctggatc tttactacca ctggcatcca gggtcactgt
     1141 actattttca tttttaggag tgatttgaga tatagaagct attggacgtt tatttacatt
     1201 ttctatggca ataaatacag gtggttgaga tacagacttt tcacccttag aatctgtcac
     1261 aactaactgc atggttatag agcctccagc tggagggatt tcaggtaaag caaatcttag
     1321 tattggacta ttaactcctc caatgaattt tttaattgga actccggctg tttgtgacca
     1381 ttggtatttc agaccttgtt taccagtttc tggatctgta gtagcgcctg cattgagtgt
     1441 tacagtagta ttttcttttc ctatcttagg gaaattggct attttaatag atggtggttt
     1501 attcaacttg gtatccttac ccgcatcagc accaggacct gtagtagttt tagcaggagg
     1561 agtagtagta attttagcag gagcaggagg agctttggca ggagcaggag gagctttggc
     1621 aggagcagga ggagctttgg caggaggaac actaccagta gcctcagcta atttttggca
     1681 ttcagcatct acatcaaatt cgccaccttt attaacctga aatctacttt taccatctgg
     1741 acattctacc gtaatacctg aacccaaaaa aattttatca gcatatgctt ttgcaatatg
     1801 taattgtgat atactagaac tattattatt gtataaaatt actaaatata ctaataatga
     1861 gataatggaa aggtaaaaaa ataattcata aatgttatta gatcttattt tatttaacct
     1921 acttacattc aagttctatt acactgtcct gcggtaaaga gtatttagta ggtttatttt
     1981 caccacatgc tttaattatt tctgctggtt caggattatt agcattacct tttggttttt
     2041 gagaaattat tacaatccca ttttgatttt cttttgatgt ccccagtagg aggtcttgat
     2101 ctttttcggt tatggttaaa ttggtcttgt tccacgaaca attgaatgaa gtattcggat
     2161 ctttcggttt aggtgggcag tcagaagact gcaatggttc taaaattcca tctactccac
     2221 caatcagccc gatcatagga ttgcgttcga gatttaacgg attaactttc ataacttttt
     2281 tgaaatttaa tatttcagaa gtgatttcaa cagttagtgg ggttttatct acagtataat
     2341 atgttttagc ataaggatta taacataatt gtgttgttgg attgcctgtt atttttatat
     2401 tcaataactg atcacgcgta aaagtaggat tatcaatctt gattggatga tcacttggtg
     2461 gaaatctatc taaagggttt ttaagactaa ggtgtgttgt actaccacaa ggtgattggg
     2521 aatatactga aggtacaagt tgttcctgca aatctaataa aatgtattca tcatagcaat
     2581 aagcaacaat aaataaaatg aaaagaacaa ttatagatat tatagatttt ctaatattat
     2641 atgttataac ttgttttatc ttattcaata ttcattccct catttgactg agaagtagaa
     2701 ttagttggtt caaattca
//
LOCUS       DATIAS010000466         2495 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1992829, whole genome shotgun sequence.
ACCESSION   DATIAS010000466 DATIAS010000000
VERSION     DATIAS010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1992829"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..968)
                     /locus_tag="VLA74_09340"
     CDS             complement(<1..968)
                     /locus_tag="VLA74_09340"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HSF50948.1"
                     /translation="MYNRLTIVLISGILVISIGFFTVFHFVYGITNADNITKSLSISS
                     LNVTTNISDSKLKIALLTDGLFSDAGWAAFGYNSVQLLNLRYGHEIDFKENVDIPNIE
                     MTLRDYASKNYDLIISHGFEWGDPTIKVAKDYPNTKFIVFTGLVNSSNVASIFPMQQE
                     GTYLLGALAAMMSKTKVIGFIGGEKYPNIINIYEGYKRGAADVDPNITVLDIYLDDWD
                     DPIKGKKSANDLINKGADFLLQVADTSGHGVIEAAKTRGIYVFGAVSDQNKLAPNNVL
                     SSFILDVEKSLDSIINMVQYRNFSGQIFKPGLEMNKGAAGDGIVYIS"
     gene            complement(1040..1663)
                     /locus_tag="VLA74_09345"
     CDS             complement(1040..1663)
                     /locus_tag="VLA74_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HSF50949.1"
                     /translation="MDLDNGIEYLKKKDAIMKEIINLVGNYCIQIRPDPYLALVESII
                     YQQLTGRAAHSIYQRFVNHYNDVLLTPEKVLSTSNETMKSFGLSNKKIEYIKLLSKDI
                     TEKNLNLQSVCTLDDEEIINQLTKMKGIGRWTADMFLIFCLGRKDVFPIHDLGIKKAM
                     QKWYLKSTIQFPPTKQKMLEISQVWKPYRSIATWYLWKSLSKFDTIG"
BASE COUNT          838 a          411 c          323 g          923 t
ORIGIN      
        1 gatatataga caataccatc acctgctgct cctttgttca tctccaaacc gggtttgaat
       61 atttgtccag aaaaatttcg atattgaacc atattaataa tactatctaa cgatttttcc
      121 acatctaaaa taaatgaact aagaacattg ttgggagcca atttattttg atcggatacc
      181 gctccaaata catatattcc tcgggtctta gcagcttcaa taactccatg accagatgtg
      241 tctgctactt gcaataaaaa atctgctcct ttatttatta aatcatttgc tgactttttc
      301 cctttaattg gatcgtccca gtcgtctaaa tagatatcaa gtactgtgat attaggatca
      361 acatcagcgg ctcctctctt atagccttca tatatattta taatatttgg atatttttct
      421 ccacctataa aaccaattac tttcgtcttt gacatcattg ctgctaatgc tcctaacaaa
      481 tatgttcctt cttgctgcat tggaaaaatg gatgcaacat tcgaagagtt aactagccct
      541 gtaaaaacta taaattttgt attaggatag tctttggcaa ccttaattgt gggatccccc
      601 cattcaaatc catgggatat aatcaaatca taatttttac ttgcataatc tctcaaagtc
      661 atttctatat taggaatatc aacattttct ttaaaatcta tttcatgacc atatctcaaa
      721 tttaatagtt gtactgagtt atacccaaaa gctgcccatc ctgcatcact aaataagcca
      781 tcggttaata aagcaatttt tagctttgaa tccgagatat tggttgttac atttaatgaa
      841 gaaatgctta atgacttagt aatattatca gcattagtaa tgccataaac aaaatgaaat
      901 actgtaaaaa atcctataga tataacaagt atccctgaaa ttaaaactat ggtaagcctg
      961 ttatacatat atattattac tagtcaaaca acaatattct ttattaacat tacacgcaat
     1021 taattttgta tttttttatt tatcctattg tgtcgaattt tgaaagcgat ttccataaat
     1081 accacgttgc aatgctccta tacggtttcc atacttgcga tatttctagc attttttgtt
     1141 ttgtaggagg aaattgtata gttgatttta agtaccattt ttgcatagcc ttttttatac
     1201 caagatcatg gatcggaaat acatcttttc ttccaagaca aaatattaaa aacatgtctg
     1261 cagtccacct accaatacct ttcatctttg taagctgatt aataatttcc tcatcatcta
     1321 atgtgcacac tgattgcaga ttcaagtttt tctctgttat atctttagaa agtaatttaa
     1381 tgtactctat ttttttgttc gataaaccaa atgatttcat tgtttcatta gatgttgata
     1441 atactttttc aggagtaaga agaacatcgt tgtaatgatt aacaaatctt tgataaatcg
     1501 aatgtgcagc tcttccagta agctgttgat atattattga ttctacaagt gctaggtaag
     1561 gatctggtct tatctgaata cagtaattgc caaccaaatt tattatctct ttcataatag
     1621 catctttttt cttgagatat tcaattccat tgtctaaatc cattcgataa cctattattt
     1681 tcaatatatg gagttataaa aaaagttgga tctgctaata tatggtttgg accagtgatt
     1741 gttacaacca gtctttcatc ctctgttggt gtgactactt tctagtatct gttaattaca
     1801 tttttcctct ctccatatca acatcttttt ccagttcaag gttgggttgt ttgtatacta
     1861 tacccagatt gtaaattatc ctccacttct gtataggact gacattcatt tgcagtaata
     1921 aagaaagata tacagcaaaa gtcggatact ctttatattc aagtttttaa gtataaaatt
     1981 ctatagtctt gacttgattt gaaacaaata ctactattcc cccaatacca tctatcataa
     2041 aacaagaaaa tcaatgatga ttataatttt tatccattta tattatatgc aaatacgact
     2101 accgaccact ggaaataaat gtattttttt ctagtttata ttaaatactt ttatgaaata
     2161 aagcaatgat gatattatta aagatttatc aatgataata tgtaagtcta atttttcttc
     2221 atattttttt attgacaatg agatttttta taaaaattga aacaaatttg tccaatgata
     2281 taaacttaac tacttgaaat attttaaaat agaatatctt ctttaataat actaaagaga
     2341 taatttattg ggaagaaaac tggggtctat taaaagatca aataaatgaa gaaaaagaga
     2401 acataattga aaaaatttta aatacgaaaa tcaatttata gcaatcaata agactcgaac
     2461 ctagaagcat tagtgtaggg tttttttgac tttta
//
LOCUS       DATIAS010000467         4610 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1856689, whole genome shotgun sequence.
ACCESSION   DATIAS010000467 DATIAS010000000
VERSION     DATIAS010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4610
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1856689"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..1026)
                     /locus_tag="VLA74_09350"
     CDS             complement(22..1026)
                     /locus_tag="VLA74_09350"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HSF50950.1"
                     /translation="MQKEQTFWEPLLTSIEEKNCLPFIGQESHNSISFADPAKKSLHY
                     IDLDKISNEWAEKHKYPLENTSQISNVAQFLSIKFDSNIFPNKELSRIISKIEPPDFS
                     QAEYDNTPYSVLAKLPLPIYITTNYDHFMEAALINNNRKPVSDFCRWSDYLLDNNKYE
                     FEAKRFSENKYSIKGENLSSVLEQGSDYEPKVDRPLVYHLYGDIAAPASMVLTEKDYF
                     EFVINLQKSSSPLARIPNYILQSLAISSLMFIGYNLEDIVFRTIFQGFIRLQTSNIRD
                     TNISVHVPREVSKEKAELIMEYLSSYAEKFYVVDIHWGNINEFILDLNRRWINYKKTM
                     "
     gene            complement(1181..2557)
                     /locus_tag="VLA74_09355"
     CDS             complement(1181..2557)
                     /locus_tag="VLA74_09355"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HSF50951.1"
                     /translation="MVDRDKPRVEQLPLSQSCREIIHLYDNLDMTKENEQEKFWNKLK
                     ELCRLADKTKASSGYYIYIAELVKSLNNYKITIETLKSQIEDAKDLGQESLALNLAIM
                     RNYKNSIDKIEQLQEKCLEVENKLVIKEDEPRGTEPTKLDREREATWSDLLYSIKEKI
                     CIPLIGQEANLQWLNELKDLSFNWAKECQYPLENFDDLSSVSNFLAMENGNNLTPKNE
                     LSRIISKIEPPDFSQAEYDNTPYSVLAKLPLPIYITTNYDHFIEAALINNRRKPVSDF
                     CRWSDHLLKNDVYANLSKNFSKSFFSIKGENLSSVLEQGSDYEPTVERPLVYHLYGDI
                     AAPASMVLTEKDHFEFVTNLNKNYEKTLLNSFIYPKITSAPLLLIGYTLNNLFLCLLL
                     KSISEKSDLSNNIIVFPSISVIQKKRAEEYSTKYYKDIFNANTFWMDNYEFSKELQSR
                     WNKFKSEL"
     gene            3232..3462
                     /locus_tag="VLA74_09360"
     CDS             3232..3462
                     /locus_tag="VLA74_09360"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50952.1"
                     /translation="MRNTYLRNITTKERNTLHLLIEDDPDSGYRAKIILLKDDGYTVP
                     EIRKITNHHDNNIRKWIHRFNEKGIYHLAYVS"
     gene            3643..3813
                     /locus_tag="VLA74_09365"
     CDS             3643..3813
                     /locus_tag="VLA74_09365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50953.1"
                     /translation="MESDHFCVDQNISVPSVICSVVLPYPGTDSILEIFYESVLDNLK
                     RYFGQTSHILPE"
     gene            complement(3957..4463)
                     /locus_tag="VLA74_09370"
     CDS             complement(3957..4463)
                     /locus_tag="VLA74_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50954.1"
                     /translation="MTSTISKTRFEKIYRSEHDSNQKERMLLVLNVIYDKQIPAQVAR
                     DLHRSRTWASDWLKRYREEGIEGLKDRSKSGRPPDIQEETVYEIKNELSSSKQGWTTK
                     QVEDLIVKKSGGIRYHYTHICRLLHKWGFKQKVPTKVHVKTATREEKEGFKKEQERYW
                     TISKTDSL"
BASE COUNT         1492 a          729 c          646 g         1743 t
ORIGIN      
        1 tatcgattta aatttgtatt gtcacatcgt ctttttataa tttatccagc gtctattcaa
       61 atctaatata aattcattga tgttacccca atgaatatca acgacataaa atttctcagc
      121 atatgaggat aaatattcca ttatcaactc tgctttctct ttactaactt ctcgtggaac
      181 atgaacagat atatttgtat ctctgatatt agaagtttgc aatcttataa aaccttgaaa
      241 tatagtacga aaaactatat cctctaagtt ataacctata aacattaatg atgaaattgc
      301 tagggattga agtatgtaat taggtattct agccaatggg gatgatgatt tttgcaaatt
      361 aattacaaac tcaaaataat ccttttcagt caagaccatc gaggcaggtg cggctatatc
      421 tccatacaaa tggtatacta atggtctgtc tactttaggt tcatagtcac ttccctgctc
      481 taaaactgaa ctaaggttct ctcctttaat agaatactta ttttcactaa atctcttggc
      541 ttcaaattca tatttgttgt tatccaataa ataatcagac catctacaaa aatcactaac
      601 aggcttacga ttattattta taagagctgc ctccataaag tgatcataat ttgtagttat
      661 atagataggc aatggaagtt tagcaagtac agaatacggt gtattatcat attctgcttg
      721 cgagaaatct ggaggctcta ttttacttat tattcgactt aattccttat ttggaaaaat
      781 gtttgaatca aattttattg atagaaattg ggcaacattt gatatttgag aagtattttc
      841 taaaggatat ttgtgttttt cagcccattc gttagatatt ttatcaagat caatataatg
      901 aagagatttt tttgcgggat ctgcaaaaga aatactatta tgtgactctt gtcctataaa
      961 aggaaggcag tttttctctt caatggaagt taataatggt tcccaaaagg tttgttcttt
     1021 ctgcaatttt aaatttattt tatcatatct tgatataaaa agatattaga aaacaatttc
     1081 aagacaatac tatcatctta acatctttta aaataactat attaaatttt tatccccatt
     1141 aagaaattag gaatttttta attatcttta cagtattaaa ttataattca cttttgaatt
     1201 tattccatct tgattgaagt tctttggaaa attcataatt atccatccaa aaagtatttg
     1261 cattaaaaat atctttataa tattttgtag aatattcttc cgctcgtttt ttttgaataa
     1321 cggatatact tgggaatact attatattgt ttgataaatc actcttctct gaaatactct
     1381 ttaacaaaag acataagaat aaattattta atgtataacc aataagcaat aatggtgcag
     1441 atgtaatttt aggataaata aatgaattta ataaagtctt ttcataattc ttatttagat
     1501 tagttacaaa ctcaaaatga tccttttcag tcaagaccat cgaggctggt gcggctatat
     1561 ctccatacaa atggtatact aatggtcttt ctactgtagg ttcatagtca cttccctgct
     1621 ctaaaactga actaaggttc tctcctttaa tagaaaagaa acttttacta aaattttttg
     1681 atagattagc gtatacatca tttttcaata gatgatcaga ccatctacaa aaatcgctaa
     1741 caggcttacg tctattattt ataagagctg cctcaataaa gtgatcataa tttgtagtta
     1801 tatagatagg caatggaagt ttagcaagta cagaatatgg tgtattatca tattctgctt
     1861 gcgagaaatc tggaggctct attttactta ttattcgact taattcattt tttggagtca
     1921 agttattccc attttccatt gccaagaaat tggaaacact agataaatcg tcaaagtttt
     1981 ctaaaggata ttgacattcc tttgcccaat taaaagataa atctttaagt tcatttagcc
     2041 attgaagatt tgcttcttgt ccaatcaaag gaatacaaat tttttcctta attgaatata
     2101 atagatcaga ccatgttgct tctctttctc tatctaattt tgtaggttct gttcctcttg
     2161 gttcatcttc ttttattacc aatttatttt ctacttccaa acacttttct tgtaattgtt
     2221 cgattttatc aatagaattt ttgtaatttc tcattatagc tagattaaga gctaaagatt
     2281 cttggccaag gtcttttgca tcttctattt gagactttaa tgtttcaatt gtaattttat
     2341 aattgttcaa acttttaact aattctgcga tatatatata atatccacta gaagctttcg
     2401 ttttatcagc aagacggcat aattctttta gtttattcca aaatttctct tgctcgttct
     2461 cttttgtcat atccaaatta tcgtataaat ggataatttc cctacaggac tgactcaagg
     2521 gtaactgttc aacgcgaggt ttatctctat caaccattct tccattgtac cactttttct
     2581 agaaaattat agaaataaaa gaaattaaac tttgtgctta ttatattcgc cctcttcttt
     2641 tccctattag atagcaatcg ttttgaccat tttaactcct caatcattaa tgaatttcca
     2701 atatacaatg caattcatca atgatagata tattggttag gacattacac tttatgtgac
     2761 catattaaaa aaaactagaa ccttacatat tttaatatgc atttcaccta tgttttttag
     2821 gtgtatcttt tcaaaagaca tctaaaagat ctagataaaa taatttagga aagattctta
     2881 aataaaaatt aagaatgtct aaatttataa taaaagaaac actgattaaa gttggtagtt
     2941 aatatattgt ggattgcaat tgaatcagac aatgagggaa ttctgaatga atgaagattt
     3001 gcattcactt tagcttgtgg ttattattgg tgatgggtat tagatgatat ggtaaaactt
     3061 atgatttttt gaaaaccatt atatctgaat gtactaaaaa attttaatta aaaggtcctg
     3121 tgttaacagt tatgtaatgg attgcctaat tactattgta aattaattat gattatttaa
     3181 acaaattagc tttataacaa tagatttagc ttactacttg ttaactcatt tgtgaggaat
     3241 acatacctca gaaacataac aacaaaggag agaaatactc ttcatttgtt gatagaagat
     3301 gatccagatt ctggatatcg agctaaaatc attctactaa aagatgatgg ctatactgta
     3361 ccagaaatac gaaagattac aaaccatcat gacaacaaca tcagaaaatg gattcacaga
     3421 ttcaatgaaa aaggtatata ccacctagca tatgttagct gacacctcct agcaaatagt
     3481 ttctcatatt taggttgaat ctttttgttc tgaaatatgt ggatatttta tttataaaat
     3541 ctgtaaagga tgaatagtat tgaagaacaa gtagatcgtt tttagatata tgccatattt
     3601 cttctaatac cataaactct ggagatgctg ttggaagata tattggaatc agatcatttt
     3661 tgtgtagatc aaaatatctc agtaccttct gtgatctgta gtgttgtttt gccttatcca
     3721 ggaacagata gcattttgga aattttctat gaatctgttt tagataatct aaaaaggtat
     3781 tttggtcaaa ccagtcatat actgcctgaa taactgtttt ccttgtagac ttgttgcacc
     3841 aaacaaaact gattcctgat gagatccagt gattctgact acaggtcttt catctttctt
     3901 tatccatacc cttcttacaa gtgaatcata gaagaagaat gattcatcag tagatactac
     3961 agtgaatccg tcttggagat tgtccagtat ctttcttgct cttttttaaa accttctttc
     4021 tcttctcttg ttgctgtttt tacatgtacc tttgtgggta ccttctgttt gaatccccac
     4081 ttgtgcaaaa ggcgacatat gtgagtataa tgatatctta ttccaccgct cttttttaca
     4141 atcagatctt ctacctgttt tgtagtccaa ccctgtttgc tagacgacag ttcatttttt
     4201 atctcatata ctgtttcttc ttgtatatct ggtggtctgc cactctttga tctatctttt
     4261 aatccttcaa taccttcttc tctgtatctt tttaaccagt cagaagccca tgttctgctt
     4321 ctgtgaagat ctcttgctac ctgtgcagga atctgtttat catatatcac atttaaaaca
     4381 agtagcattc tttccttttg attagaatca tgttcagatc tgtatatttt ttcaaatctt
     4441 gtctttgata ttgtactagt caataagata tatcatgcta atagtactag ctaatagcta
     4501 ttctgatcta aaatgtaata caacatggta aaatattgtc agcatactta tgatagttgg
     4561 tatacgaata tcttcatcca attgtataca tgttctagat cacaattttg
//
LOCUS       DATIAS010000468         5154 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1582176, whole genome shotgun sequence.
ACCESSION   DATIAS010000468 DATIAS010000000
VERSION     DATIAS010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5154
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582176"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..849
                     /locus_tag="VLA74_09375"
     CDS             274..849
                     /locus_tag="VLA74_09375"
                     /inference="COORDINATES: protein motif:HMM:NF014447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50955.1"
                     /translation="MNKKLLSEIPKSLKLVVELGMGDGRFIKDLSEKEKENYFIGIEI
                     NTERFQEASSNIKSNNVKLINNSFDEVLPLFVDNSISKVIYILPDPKFIDKNHKQKWS
                     KLYKIIYDKLEHQGSFILITEITDALLQPVSDELFFGEMIWLKEFFESIGFVTIDCSE
                     GPPELYNTYFLKLFKGDTQRIRIIYFKFVKN"
     gene            complement(939..1523)
                     /locus_tag="VLA74_09380"
     CDS             complement(939..1523)
                     /locus_tag="VLA74_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF99 family protein"
                     /protein_id="HSF50956.1"
                     /translation="MNKEKKLHLDKKGIRVFAIAESFKKENSISMIAGIVMRKDLIVD
                     GVVFGNVTIGGNDATDCIISMIKNLERNDINLILLDGMIISMYNIIDGEEIFRTTGMP
                     VIAITFKDSFGIDQSIKNYFPDNYKTKIESYNKLGERKKIMLKTGKFLFIRNWGITIQ
                     DSINIIDSFLIQGAIPEPIRIAKMIARAHVRINK"
     gene            1592..1978
                     /locus_tag="VLA74_09385"
     CDS             1592..1978
                     /locus_tag="VLA74_09385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50957.1"
                     /translation="MASADNFALEERKAEEAIKWMNSYSLQHDKKFEAKLEGYSLSTV
                     NFGNFKVFSWKGDWSFARNLIKKTSSKLSMKVIESGYHEKDSFLLSLIGINKEIAKVY
                     NKGHVIGNIILDRKSGKWIAKKEKLT"
     gene            complement(2148..2381)
                     /locus_tag="VLA74_09390"
     CDS             complement(2148..2381)
                     /locus_tag="VLA74_09390"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSF50958.1"
                     /translation="MVEAFVLITCDYGQEEKILEELDKIEEIQVINRLEGPYNILLKI
                     NSETIDEIKEIVTGQIKTIDKIRHTLTLKIKTD"
     gene            complement(2388..2798)
                     /locus_tag="VLA74_09395"
     CDS             complement(2388..2798)
                     /locus_tag="VLA74_09395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50959.1"
                     /translation="MNSNKQRKNYYYQTVKILNMDFDNLCKKILDMDNNIRFAGVCDE
                     SGEIKYGSQREGVENILSSEETRKSNLQALARWGLRNSLAPKIGKGKYAMAEYEKIKR
                     ITIPLPDEHLLLVTTEVKADHGKIINNIISLLSA"
     gene            complement(2827..3057)
                     /locus_tag="VLA74_09400"
     CDS             complement(2827..3057)
                     /locus_tag="VLA74_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50960.1"
                     /translation="MDTSKIIKKGQNSLFFRHEYLRDSLSQKYRECESCKTRTQFTCV
                     VCGFCWSCHWKIEQLSKIPEHFLKDSVSFNKK"
     gene            complement(3225..3512)
                     /locus_tag="VLA74_09405"
     CDS             complement(3225..3512)
                     /locus_tag="VLA74_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50961.1"
                     /translation="MRNEIDDQMSFNLVKAIKNTHRNPINIILHAVGLVLYCIGLYLI
                     ADDLIGEGQKMVLGISSFIAAIGLFLIGHKIEGNIKAITIIILLKYIKSKI"
     gene            complement(3999..5000)
                     /locus_tag="VLA74_09410"
     CDS             complement(3999..5000)
                     /locus_tag="VLA74_09410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50962.1"
                     /translation="MGKSKIKSKNNPSKNNTLRYALISSITIVIYLISLSISNSYAED
                     IVSISERNIFKDSNDKLNLVGTLTNIGKTPLEVTIGVDVKKPFQSEQEVLKSKTFASV
                     LYPHREVPFKFTIKNGELFEGSVFVVETKEVNKPLFATVKHEYSNIAMGDEKALIGTI
                     KNIGSSIINDVAIYASVHSKDGTQLDSVKSAVIPILYPGEEKPYKIISDPTTRSLAYY
                     YSCAGLDINSPITTLDLGGGEFLAFNFESASLVSNFIYDKSSDNIMFTIKPYNPEGGD
                     LIFKIPQSNTNQKVNISVDGKPHKEATITTDGKTITMKVSIPSDEHKVIISGARNGV"
BASE COUNT         1659 a          800 c          725 g         1970 t
ORIGIN      
        1 tttaacatac tttggctaat tattgttggt ttaccaatag aatatttgtg agccgtctaa
       61 aacgttacct cgccaatagg gtaaaaaatt atagatactc aaatctgatt ttaatgtctc
      121 aattagtatt gttttgaaat aattaatcat ctattttaac cgtatttgtt ccatttaaaa
      181 tatgaaaata tcattataac aaatgaaatt ttaaatatat ttgattaata acgaaatgta
      241 taaaaaatca ttctgaactt ccaaattaag ttaatgaata aaaaacttct atctgaaata
      301 ccaaaatccc tcaaattggt agttgaactg ggaatgggag atggaagatt tatcaaagat
      361 ttatcagaaa aagagaaaga gaactatttt atagggatcg aaattaacac ggagcgtttt
      421 caagaagctt catccaatat taaatcaaat aatgtaaagt tgattaataa ttcctttgat
      481 gaggttcttc cattgttcgt ggataattcc atcagtaaag ttatttatat tttgccagat
      541 ccaaaattta tagataagaa tcataaacaa aaatggagca agttatataa aataatctac
      601 gacaagttag aacatcaagg tagttttatt ctaatcacag aaatcactga tgcattgtta
      661 caacctgtat ctgatgaatt attttttgga gaaatgattt ggttgaaaga attttttgaa
      721 tctataggat tcgttacaat agactgttcc gaagggcctc ctgaacttta taacacctat
      781 ttcctcaaac tttttaaagg agatacgcaa cggattagaa ttatatactt taaattcgta
      841 aaaaactaga cattaaaaaa atcttcttac tatgaatatg agatataatt attggctatt
      901 attttcttta ttttgataga taatctggta tttctttttt acttgtttat tctaacatgt
      961 gctcttgcta tcatttttgc tattcttata ggttctggaa ttgctccctg aattaggaaa
     1021 gaatcaataa tattaattga atcttgaata gttattcccc aatttctgat aaagagaaat
     1081 tttccagtct ttaacatgat tttcttacgt tctcccaatt tgttgtaact ttcaatcttt
     1141 gttttataat tatccggaaa atagttttta atagattgat ctataccaaa ggaatctttg
     1201 aatgtgatag caataaccgg cataccggta gttctaaaaa tctcctctcc gtcaatgata
     1261 ttatacatgc taattatcat accgtccaat aaaataagat tgatatcatt tctttccaga
     1321 ttctttatca ttgatatgat gcagtcagta gcatcattac ctccgatagt aacgtttcca
     1381 aaaacaacac catcaactat tagatctttt ctcattacaa ttcccgcaat catggatatt
     1441 gaattttctt ttttgaaact ttcagcaatt gcaaatactc tgattccttt tttatctaga
     1501 tgtaactttt tctctttgtt catatgtctg ttttattata taataaaaca acgtcaagta
     1561 tttaatctgg attatgattt cttatgatta attggcaagt gctgataatt ttgctcttga
     1621 ggaaagaaag gcagaagagg ccataaaatg gatgaattca tattccttac aacatgataa
     1681 aaaatttgaa gctaaacttg aaggatattc actgtcaaca gtaaatttcg gcaattttaa
     1741 agttttttct tggaaaggag attggtcatt cgcaagaaat ctgattaaaa aaactagcag
     1801 taaactcagt atgaaggtta tagaatctgg atatcacgaa aaagattctt ttcttctgtc
     1861 cttgatagga attaataagg aaattgccaa agtatacaat aagggacacg taataggtaa
     1921 tataattcta gacagaaaat caggaaaatg gattgcgaaa aaagagaaat tgacctaacc
     1981 tatcaatagt ttttataatt aaagaatgtt attctgatat tgaaaaattc ttctaaattg
     2041 acaatgaatt actgaaaaac tggaatgtat ataaatttca tcctgcttta ataacacttt
     2101 tcatgataca aaataatgtt tttcttacat aaacatctga tcttaaacta atctgtcttg
     2161 atctttaacg ttaaagtatg tcttatcttg tctattgttt ttatctgtcc tgtaacaatt
     2221 tcctttattt catcgatagt ttctgaattt attttaagaa ggatgttata tggaccttct
     2281 agtctattaa ttacttgtat ctcttctatc ttatctaatt cctcaagtat tttttcttcc
     2341 tgcccgtaat cacaagtaat taagacaaat gcctccacca tgaattgtta tgcacttaat
     2401 aaacttatga tattattaat aatttttcca tggtcggctt ttacctcggt tgtaactagt
     2461 aaaagatgtt catctggcag cgggatagtt attctcttta tcttttcgta ttctgccatt
     2521 gcgtacttgc ccttcccgat ttttggtgct aatgaatttc taagacccca tcttgccaat
     2581 gcttgcagat ttgatttcct cgtttcttcg ctgcttaaaa tattttctac gccttctcgc
     2641 tgactaccat attttatctc gccagattcg tcgcatacac ctgcaaacct aatgttgttg
     2701 tccatgtcta gtatcttttt acacaaatta tcaaaatcca tatttaatat ttttactgtt
     2761 tggtaataat agtttttacg ctgtttgttg ctattcactg tagtgttaag ggagaaaaat
     2821 ttcttatcat tttttattaa aacttactga atcttttaaa aagtgttctg gaatttttga
     2881 aagctgttca attttccaat gacaactcca acaaaatcca catactacac atgtaaattg
     2941 tgttctagtt ttacatgatt cgcattctct gtatttttgt gaaagactat ctctaagata
     3001 ttcatgtctg aaaaacaagc tattttgacc tttttttatt atcttggagg tgtccatgtg
     3061 tttcacctaa taatattatg tattatctaa actataactt ttttggaatt attttactgt
     3121 taatatttaa agtactatag tttatcgtag aaaatatatt taaactgaac aaacatggat
     3181 ctttatagta aatacgataa acttgtttta ttatttttac taagctatat tttactcttg
     3241 atgtatttta gtaaaataat tattgtaatt gctttaatat ttccttcgat cttgtgacca
     3301 atcaaaaata gtcctattgc agcgataaaa gaagatatac ccagaaccat tttttgtcct
     3361 tctccaatta aatcatcagc tatcaaatat agtccaatac aatatagaac taatcctacg
     3421 gcatgcaaaa ttatatttat tggatttctg tgggtattct tgatagcttt taccagatta
     3481 aatgacattt gatcatctat ctcgttgcgc atttttatct tttatagtgt gaaaatatta
     3541 tattctaata ataacatctg actatacata gattatgcaa tgggccagat agttcttggc
     3601 ccattgcgac ccatcagttt ttttccggta aggcttttgc acaagtcagt acttaccagt
     3661 gtgatttaca gtcaaactcg cagtttgttt cactttcgtt tctgactgta tgattctaat
     3721 acgtgaatcg gatataagaa ggttatttgc ataaaatatg caataatgta atagaaatat
     3781 tgtacataac aataattatg tttcttgttg ttgtttgttt atatcttact tttatttgaa
     3841 atttatattc cttatttctt tttcatcatg tttctaggat tggaatagta atacgacata
     3901 gatatcattt cgaaagataa attgaatgag cttggttaat ttatcaaaat ttattttata
     3961 taaattctct tttccacaca ggaacaaatg atatattgtt atactccatt tctagctcct
     4021 gaaataatga ccttgtgctc atcggatggt attgatactt tcattgtaat cgtcttgccg
     4081 tcggttgtaa tcgttgcttc tttatgcggc tttccatcaa cactgatatt taccttctga
     4141 ttggtgttac tttgtggaat tttgaatatt agatctcccc cttctgggtt atatggtttg
     4201 attgtaaaca taatattgtc agaggactta tcatagataa aattactcac aagagatgcg
     4261 ctttcaaaat taaaggcaag gaattctcct cctcctaggt ctaaagtagt tataggactg
     4321 tttatatcaa gaccagcaca gctataatag taagctaaag atcttgtagt agggtcagaa
     4381 ataattttat aaggtttttc ttctcctgga tatagaatag gaattactgc actttttaca
     4441 gaatctaatt gcgtaccatc tttggaatga acagatgcgt atattgcaac atcattgata
     4501 atggatgacc caatattttt tatggttcct atcaatgctt tttcatctcc catagcaatg
     4561 tttgaatatt catgttttac agtggcaaat aatggcttat tcacttcttt tgtttctaca
     4621 acaaaaacgg atccttcaaa caactctcca ttttttatag tgaatttaaa aggaacttcc
     4681 ctatgtggat agagcacact agcaaaggtt ttgctcttca gtacctcttg ctcactttgg
     4741 aaaggcttct ttacatctac acctatagtt acctctaatg gagttttgcc aatatttgtt
     4801 aaagtcccta ctaaattcaa cttatcattt gaatctttga aaatgtttct ctcggatatt
     4861 gagacaatat cttctgcgta cgaattggag atagatagag aaattagata aataacaata
     4921 gtaatagagg aaattaatgc atatcttaag gtattattct tgctcggatt gtttttgctt
     4981 ttgattttgc ttttgcccat acattaatta ttatataatg atccagataa attctttatt
     5041 tcataattaa aaaaaattta ttgtttttta aaaattttaa atatctttca atttagaatc
     5101 gataataggt ttactctgtt cctttatctt cactttcaga atcttcaccg ctat
//
LOCUS       DATIAS010000469         3388 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1582475, whole genome shotgun sequence.
ACCESSION   DATIAS010000469 DATIAS010000000
VERSION     DATIAS010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582475"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VLA74_09415"
     CDS             complement(<1..335)
                     /locus_tag="VLA74_09415"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HSF50963.1"
                     /translation="MVDGSEVRKIQFTGKSTYVLSLPKKWVNELNLKPGDPVTIIRES
                     DNTLSIISDITRSSIEAVDEATVQVLKDENANSLKRKVVSMYLAGYNIINLKSKLGRI
                     DPLQREAAR"
     gene            complement(444..1373)
                     /gene="pstA"
                     /locus_tag="VLA74_09420"
     CDS             complement(444..1373)
                     /gene="pstA"
                     /locus_tag="VLA74_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HSF50964.1"
                     /translation="MSSKTDETTDRYSKRRDEIQEMMSKTYNRKIYVNKLVTILTICC
                     VIFAIIPLGSILFEVFKNGYSAIDLEFLTQKPGSIASNKGGIGPAIQGTLIVVGLGSL
                     IAVPVGVLAGIYLSEYAKSNSKFAFAVRFFSDVLTGLPSIIVGIVGYVLIVLSIGSFS
                     VIAGAFSLSLIMIPLVTRITEETLKIVPNSIREGAHSLGIPKWKITLFIVIKTAISGV
                     LTGIVLSIARIAGETAPLIMTILGTSLFFSSLTGPVDALPLRIWRLASQPYESAHATG
                     WGAALILILIILGLNISLRLLSQRKSMGSSKHI"
     gene            complement(1377..2360)
                     /gene="pstC"
                     /locus_tag="VLA74_09425"
     CDS             complement(1377..2360)
                     /gene="pstC"
                     /locus_tag="VLA74_09425"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HSF50965.1"
                     /translation="MTKYNDYHSLIPLQKVSKFEPIFKWIIIAAAAYTLFMLVLILFA
                     IGDGSKEIFIEEGFNFLTSTDWNAVPGRESFGALPYIIGTLVSSGIAIAIGVPISLGI
                     AIFLSEIAGSKLKTSLSFIIELLAAVPSIIYGFWALFVFRFWIMDFVEKPLYNLFGGS
                     LPFFAKTPFGLDVFTAGIVLAIMIIPIISSIIRELLLVVPDSQREAEYSLGATRWETI
                     KIAVLPYAKSGILGATIIGLGRAIGETMLVTLIIGNAIGLNAIPTSLFSQSQTLSSLI
                     ANEFNEAASELHLSALIGLGAVLLLLTMVINVIARVFVFKMVKTSSPGGRT"
     gene            complement(2879..3127)
                     /locus_tag="VLA74_09430"
     CDS             complement(2879..3127)
                     /locus_tag="VLA74_09430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50966.1"
                     /translation="MKTRRERTFFEWWNSIPDELKNEANLNCNNENSKNMVNSINYIL
                     LKADISTMNHIMPTIEELKYWIDSGQIKNSSFTTPTFI"
BASE COUNT         1151 a          545 c          480 g         1212 t
ORIGIN      
        1 tctcgtgcag cttcacgttg aagaggatca attcttccta acttggattt aagatttatt
       61 atattatatc ctgcaaggta cattgagact acttttcgct taagggaatt agcattttca
      121 tcttttaata cttgtactgt tgcctcatca acggcttcaa ttgaggatcg tgtaatatca
      181 gatattatag ataaagtatt atctgattcg cgaataattg ttacaggatc acctggtttt
      241 agatttaatt catttaccca ttttttaggt aatgataata catatgttga tttcccagta
      301 aactgtattt ttcttacctc gctaccatct accatataag ttgccaatag ttatttagaa
      361 atgacaatac atgtatagtt tatgattaga tataatatag atgtattata tctatataga
      421 tctataatta gtttttccat agctcatata tgctttgaag aacccatact ctttctttgt
      481 gatagtaatc ttaaactaat atttagtcct aaaataatta gaatcaagat caacgcagca
      541 ccccatccag tagcatgagc agattcatat ggttgagacg ctaacctcca tattctaagt
      601 ggaagagcat ctacaggccc agtaagagaa gaaaaaaata aactggttcc tagtatagtc
      661 atgattaatg gagcagtttc tcccgcaatt cttgctattg ataatactat tccggttaga
      721 actccactaa ttgcagtctt tatcactata aataaagtga ttttccattt aggaattcca
      781 agcgagtgag ctccttctct aatagaattt ggtacaattt taagggtttc ttcagttatt
      841 cgagtaacaa gtggaatcat tattaaagat aatgaaaaag ctcctgcaat aacagaaaaa
      901 gaaccaatag aaagaactat taatacataa cctacaatac caactataat tgaaggtaaa
      961 ccagttaata catcactaaa gaaccgtaca gcaaaggcaa atttactatt gctttttgca
     1021 tattcagata gataaattcc agccaaaaca cctacaggta cagcaataag agatcctaaa
     1081 cctactacaa ttaaagttcc ttggatagct ggacctatac ctcctttatt agatgcaatt
     1141 gaaccaggtt tttgagtaag aaattccaaa tcaatagcag aataaccatt tttaaaaacc
     1201 tcaaaaagaa tactaccaag gggaattatt gcaaaaataa cacaacatat agttaaaatt
     1261 gttactaatt tatttacata tatttttcta ttatatgtct ttgacatcat ctcttgaatc
     1321 tcatctcgtc ttttggaata tcgatcagtc gtttcatcag ttttagatga catatattag
     1381 gttcgtcctc ctggactaga agtttttacc attttgaaga caaaaactcg agctattaca
     1441 tttattacca ttgtgagcaa aagtagaact gctccaagac caataagagc agataggtgt
     1501 aattctgatg ccgcttcatt gaattcattt gctattaaac ttgataaagt ttgactttgt
     1561 gagaaaagag aagttggtat ggcattcaat ccaattgcat tacctattat caaagtaact
     1621 agcattgttt cacctattgc ccttcctagt ccaattatag tggctcccaa gattccagat
     1681 ttagcatatg gtaatacagc aatttttata gtctcccacc tagttgcacc taaactatac
     1741 tcagcctctc tttgagaatc aggtacaaca agtaataatt ctctaataat agaagaaatt
     1801 atgggaatta tcattatggc aagtactata cccgcagtaa atacatctag accaaaaggt
     1861 gttttagcaa aaaatggcaa agagccacca aataaattgt ataaaggttt ttctacaaaa
     1921 tccattatcc aaaatctaaa tacaaataat gcccagaaac catatattat acttggaact
     1981 gctgctaaaa gctcgattat aaaggataaa gaagttttta attttgaacc ggctatttcg
     2041 gacagaaata ttgctatgcc taaactaata ggaacaccaa ttgcaattgc tatacctgag
     2101 gaaaccaaag tacctataat atatggcaaa gctccaaatg actctctgcc gggtactgcg
     2161 ttccaatcag tgctagttag aaagttaaat ccttcttcta taaaaatttc ttttgatccg
     2221 tctccaattg caaaaagtat taagaccaac ataaagagag tatatgctgc tgctgcaatt
     2281 attatccatt tgaagatagg ctcaaattta gatacctttt gtaatggaat aagagaatga
     2341 taatcattgt atttggtcaa atccgtcgta ttgaatgtta cgcccctaat atctatgatc
     2401 tcttatgttc ttttaggtat cacaccgttt tctcatagat ctatatagtt tatcatttaa
     2461 tatgttatat gtcatttata atcttatgat aatgatgtga atattaacat actaaatgat
     2521 tttgattttg tatacaaaga tagactgaat aaatttgtgt atgtcacttt ctttaatttt
     2581 tttcttttat ttgttgcatt ctgttatatt tatgtttaca gaggtaatta tttaaattaa
     2641 tattgtttgc atatgaatat tctttttttt acaattataa caatgattaa tattgaattt
     2701 atttattaaa atagtagcaa accaataaca tgattcacaa aatgcaaatt tacaatagta
     2761 tttgtcataa taatttttag ttatgctaac agtttgttta ttagacattt ttaattatct
     2821 cctatttact acatatgctc tgaaactacg ttaatctatc ggctatattt tatatagtct
     2881 atataaaagt aggtgtagta aacgatgaat ttttaatttg tccactatca atccagtatt
     2941 ttaattcttc aatggtgggc attatatgat tcattgtaga tatatcagct tttagcaaaa
     3001 tatagttaat gctattcacc atatttttac tattttcatt gttacagttg agattagctt
     3061 cattttttaa ctcgtctgga atactattcc accattcaaa aaaagttctt tctcttctag
     3121 ttttcatctc tagaatatta tttcgtttag gagaacttta aaattgattg ttgtaaaact
     3181 tgtatgtcaa tagagatttt ctttggtatt tagactatat gattgttaat ttattgatca
     3241 taatggcaaa ttattttgta ttaatactct acacatattc ctggaacatg gatctttttg
     3301 aataaatgtg gtgaaactac taaattatca tcatcatttt ttaaaagtga cgattgtgtt
     3361 tcagaactaa acaatatttt gttaaccg
//
LOCUS       DATIAS010000470         3929 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1176021, whole genome shotgun sequence.
ACCESSION   DATIAS010000470 DATIAS010000000
VERSION     DATIAS010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3929
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1176021"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VLA74_09435"
     CDS             <1..342
                     /locus_tag="VLA74_09435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF50967.1"
                     /translation="ILVIVSIAAKFLTVFVSAKSQRFSSIDSVKAAFGLSSSGGELAL
                     VVAKGGVNTGLTSAFLLPMIGAMTIITTFISPYMIKLGWKVPDKVFSKKEEKDKEGEG
                     EGNGEEEKENK"
     gene            complement(773..1276)
                     /locus_tag="VLA74_09440"
     CDS             complement(773..1276)
                     /locus_tag="VLA74_09440"
                     /inference="COORDINATES: protein motif:HMM:NF028105.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HSF50968.1"
                     /translation="MHGEIGFIARFGLLSGLMEQEIIYIKEKEICSNGYGCDCDSLHQ
                     VECRNGLTIIAIGWTRGNKKALATIIPTKYWEKFRALPKFDYTDIAATHKIMKRDVGI
                     AYIAMRKIHYNVMRFKETLSVDEAEVIAGRFSSVSGRHYVLHDPEKLAEKYANAWNNF
                     GINSSQL"
     gene            complement(1464..2051)
                     /locus_tag="VLA74_09445"
     CDS             complement(1464..2051)
                     /locus_tag="VLA74_09445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50969.1"
                     /translation="MKTPKYICAKCRLPFTRRWNANRHCNNKHSGYLEHIISFTDYII
                     NRQDSAALNNLYKDNNSHQKNVLKNQVFFDKPISANRSLFDSITDPFEYFLDQELLPY
                     EVLNPLGPKYEELRSILDFLPESSRNQILGIVLSTAINSDNPVETMQKKIIEYSKSKS
                     NVMMLNDLTRFYGGDKEYTKQLLKLKAKQKKGRYH"
     gene            complement(2293..3255)
                     /locus_tag="VLA74_09450"
     CDS             complement(2293..3255)
                     /locus_tag="VLA74_09450"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF50970.1"
                     /translation="MVGLIHWPHNNKLRPGRPYVYSPTVILRCFIVRMWFRLDSNRAL
                     HEYLVMDLSYNKKVMKECGLSRIPSRRTFDRRLTTLSGDIKNRITTMGKLFVHEKIID
                     PCVLSTDSTLIKAKGHVWHKSSMKKKVVPHASIDTDARWGFSHTKGWIFGYKLHMVAS
                     TGSIIVPLAADFTTANIPDNQMYSLLITASLPLAIIRRTSYMSADPGYDDHKLYYLST
                     NIGFRLVCPVQRYKNTSEDRLKLVEFYESNIGQNIYSLRNTSIEPLIGRIKSALRIDP
                     LPVRGYTKSCAIVLLSVLLYQILVYYNCKTNMDNPMAIKYLLGT"
     gene            3383..3556
                     /locus_tag="VLA74_09455"
     CDS             3383..3556
                     /locus_tag="VLA74_09455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50971.1"
                     /translation="MTQPQIIINSSKTDEKEKIKAINLMMQCYKDKFQMIQSEPDLVN
                     KKSYMKRISVFDT"
BASE COUNT         1296 a          596 c          576 g         1461 t
ORIGIN      
        1 atattggtaa tagtatcaat cgctgccaaa tttcttacag tttttgtttc agcaaagtct
       61 cagagattta gttcgataga ttcagtgaag gccgcatttg gtttatcatc ttcaggtgga
      121 gaattagcac ttgttgttgc aaaaggaggg gttaatacag gtcttacaag tgcatttctt
      181 cttccaatga taggtgcaat gactataatt actacattta tttccccata tatgattaag
      241 ttaggctgga aagtaccaga taaagtattt tcaaagaaag aggaaaaaga taaagaagga
      301 gaaggagaag ggaacggaga agaagaaaaa gaaaataagt aaaattagaa aataaataaa
      361 taaataaaaa tgattattgt tagtaataaa aaattttaga cttttgattt ataatagaat
      421 atcttctaaa tagtatcaaa aattgtttct tcgaaaaaaa tcttaattac tgaaagacaa
      481 atggtttaac taatattcac ttctttttac tattattaat taggtataaa cagatagaaa
      541 cgatatccat cctttcaata atttttttcc tttctgcgtt attttataat atgttttatt
      601 attttcaact attccctcga catatccttc tctttttaaa cgattttcta aagaatcttt
      661 taatgtggat gccggtttgt aaatacgacc taaactatta taagagatag tttttgaaat
      721 atgaataatt taacaaattt tgaactgata aagaggaaat aattgtattg tcttaaagtt
      781 ggctgctatt aattccaaaa ttattccaag catttgcata tttttctgct aatttctctg
      841 gatcatgtaa tacataatgt cttccactaa ctgaactaaa tcttccagct attacttcgg
      901 cttcatctac acttagcgtc tctttaaatc gcattacatt ataatgaatt tttctcattg
      961 caatatatgc aattccaaca tctcttttca ttattttatg cgtagcagca atatcagtat
     1021 aatcaaattt tggcaaggct ctaaactttt cccaatattt tgttggaata attgttgcta
     1081 atgccttttt atttcctctt gtccagccta tcgctattat tgttaatccg tttctacatt
     1141 caacttgatg taggctatca cagtcacaac catatccatt actgcaaatc tccttttctt
     1201 taatgtaaat tatctcttgt tccattagac cagacaataa tccaaatcta gctataaatc
     1261 caatttctcc atgcatttca aaaatctttt ttaccttttc ttcaataaaa ttaggactta
     1321 caaggtagat ctttcaagat ttttgtttag gagtttctat gaataacttt tcttatcaat
     1381 tgaattattt ctgtattata taagttataa aataaaaatc accatattga gatgattaaa
     1441 tttaattctg tttatttgca aagttaatga tatcttcctt ttttttgttt ggctttaagt
     1501 tttaataatt gtttagtata ttctttatct ccgccataga atcgtgttaa atcatttaac
     1561 atcataacat tgcttttaga tttactatat tctattattt tcttttgcat tgtctctaca
     1621 ggattatcag aattgattgc tgtagataga acaattccta aaatttgatt tctagaagat
     1681 tcaggtaaaa aatctagaat acttcgtagt tcttcatact ttggacctaa tggattcaat
     1741 acctcatagg gtaataattc ttggtctaag aaatattcaa atggatctgt tatagagtca
     1801 aaaagtgatc tatttgcaga aatgggttta tcaaaaaata cctggttttt taaaacattt
     1861 ttctgatggc tattattatc tttataaagg ttgtttaaag cagcagaatc ttgccgattg
     1921 attatataat cagtaaaaga aataatgtgt tctaaataac cagaatgttt attattgcaa
     1981 tgacgatttg cattccatct tcttgtaaaa ggtaatctac attttgcaca gatgtattta
     2041 ggagtcttca tcgcaatata catttattat aataataata ctaatttaat aactttgcta
     2101 aagagcaact cggagtgact ctcagccaat gatttataat ttatagtaat aatttatgaa
     2161 ggctttgaag tgtattgaaa tccattgctt tgtttaaatg aagtcgtcaa gaacctaaat
     2221 aattgaggct gggtcataat tcaattaaca aatattgatt gtaatgtgta caacagcata
     2281 tatagtcaat ccttaagttc ctagcaagta ttttattgcc ataggattat ccatgttggt
     2341 tttacagttg tagtatacaa gtatttggta tagcaaaact gatagtagta ctattgcaca
     2401 actcttggta tatcctcgta caggtaatgg atctatcctt aatgcagatt tgatacgccc
     2461 tattaatggc tctatggatg tatttctcaa agaatagatg ttctgtccaa tattagattc
     2521 ataaaattct accagtttta acctgtcctc agatgtattt ttatatctct gtacaggaca
     2581 caccaaccta aatccaatat ttgtactgag ataatacagt ttatgatcat cgtatccagg
     2641 atctgcagac atatatgatg tccttctgat tattgcaaga ggtagacttg ctgttatcaa
     2701 taggctgtac atttgattgt caggtatgtt agcagttgta aagtctgctg ccaatggaac
     2761 tataattgaa ccagtactag ctaccatatg tagtttgtat ccaaatatcc aaccctttgt
     2821 atgactgaat ccccatcttg catcagtgtc gatactagca tgtggtacta cttttttctt
     2881 catagatgat ttgtgccata catggccttt agccttgata agagtgctat cagttgaaag
     2941 aacacaagga tcgattattt tttcatgaac aaaaagttta cccattgtag taattctgtt
     3001 tttgatatct cctgataacg tagtaaggcg tctatcaaat gtccttctac taggtattct
     3061 tgatagccca cactctttca ttaccttttt gttgtatgat agatccatta caaggtattc
     3121 gtgcaacgct ctgttagaat ccaatctaaa ccacatacgt actataaaac atctcaagat
     3181 aacagttgga gaatagacat atggtcttcc tggccgtaac ttgttattat gtggccaatg
     3241 aatcaaacca accaaataca aaatactaat tagaatagat attgatctct tctctgctag
     3301 tttgttggtt tggatgatag ttacaccaaa acatcatata caccaataga ctagctttat
     3361 tcgttatgaa aatggaataa ttatgaccca gcctcaaata attataaatt catcaaaaac
     3421 agatgaaaaa gagaagataa aggcaattaa tttaatgatg caatgttata aagataaatt
     3481 tcaaatgatt caatcggaac ctgaccttgt taataaaaaa agttatatga aacgtattag
     3541 cgtttttgat acatgattag aaagttgaat ttattttatc ttttaaattt ttacctcaat
     3601 taaatttttt tatctatatt ggatatggat ctgagaatag aaattaagaa tctaattttt
     3661 ttatatttag aggcgccgaa aaatttaagt ttaatcttgt tgaaaatagt tattagatct
     3721 aggatcataa gcaattttat atattcgcta ttatttctga atgtttcagc tagttgtaac
     3781 aaagaatctc catgaatctt tgttctcttg tcttggttct attgttatga ataaactgga
     3841 atgttttgga gtatacctgt aaattgtact acttgtttac acccatgaac tttcttatcc
     3901 ataattggta caggttgctt ctgcattca
//
LOCUS       DATIAS010000471         4923 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_903914, whole genome shotgun sequence.
ACCESSION   DATIAS010000471 DATIAS010000000
VERSION     DATIAS010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4923
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903914"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /gene="cofH"
                     /locus_tag="VLA74_09460"
     CDS             complement(<1..1065)
                     /gene="cofH"
                     /locus_tag="VLA74_09460"
                     /EC_number="2.5.1.147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(D-ribitylamino)uracil--L-tyrosine
                     4-hydroxyphenyl transferase CofH"
                     /protein_id="HSF50972.1"
                     /translation="MNFDHILKEIDPIISSIINKVIEGKDITESETIELFNSRGLELN
                     MIVTVANYLCKRKKGDMVTYVINRNINFTNVCIKRCGFCAFSRDFREEEGYYLPIEEI
                     VRRAKEAEKLGATEICIQAGLPPKMDGYLYIDICKAIKKELPNIHIHAFSPEEVLYGA
                     KMSDSSIEDYLQILKEAGLDSIPGTAAEILDQEIRDTISPGRISVQDWIKAIKYAHSI
                     GISSTSTIMYGHIESYSDIVKHLTIIKNIQKDTGGFTEFVPLSFVHSEAPMYNRNLVK
                     NIRAGPTGEEVLKMHAIARIFLNNYIENIQVSWVKEGPKMAQVLLEAGVNDFGGTLIN
                     ESISTSAGASFGQLLKPKEIR"
     gene            complement(1066..2277)
                     /gene="cofG"
                     /locus_tag="VLA74_09465"
     CDS             complement(1066..2277)
                     /gene="cofG"
                     /locus_tag="VLA74_09465"
                     /EC_number="4.3.1.32"
                     /inference="COORDINATES: protein motif:HMM:NF004884.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7,8-didemethyl-8-hydroxy-5-deazariboflavin
                     synthase CofG"
                     /protein_id="HSF50973.1"
                     /translation="MNTEEISSISIKDNLINEIFERCKDNINKKAISREEALYLLEYD
                     DIMPLLMNLSTFLKANFKKEVVTYSRKIFINITNLCRDFCSYCTYRKNPFESSSIMMK
                     PEEVMNLAKVGRKYRCTEALIVAGERPEERYKESKEWIKQLGYNSLVEYVIDISEKIV
                     KETGLLPHSNLGNITKEEMKLLKVYNVSLGLMLESSSERLVQKDMAHEFAPSKNPKNR
                     LEVIRNAGRTKIPLTTGLLIGIGETKEEVINDIFLLKQINNEFGNIQEIILQNFQPKI
                     NTRMQDFPSPTKDYFLKIVSLARLIMPDMNIQIPPNLSPGYYSRFLDAGINDWGGISP
                     ITIDHVNPEFSWPKIKELKEITESKHQKLRARLPVYPEFIDKEGFISPELRNYINSFI
                     DLDRLVKEEYI"
     gene            2375..2680
                     /locus_tag="VLA74_09470"
     CDS             2375..2680
                     /locus_tag="VLA74_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50974.1"
                     /translation="MSESNSIADIDTKYVVPVKLSDKAMRLDENVKNELKSIGMMDDK
                     GKLKLKGVSPKMLKRMKLESVDCPVLEKEISFIPCYVCKNFHSRISGKVYCRGEPLV"
     gene            2723..4174
                     /gene="proS"
                     /locus_tag="VLA74_09475"
     CDS             2723..4174
                     /gene="proS"
                     /locus_tag="VLA74_09475"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HSF50975.1"
                     /translation="MSELKEIGITTKKEGDFSEWYTQVVTKAGLVDYSPVKGFIILKP
                     YGYRIWEIIKETLDRKLQESGHQNGFLPILIPESLLSKEKEHFKGFTPEVFWVTKAGD
                     NELSDKLAVRPTSETLAYQIFSKWIMSYRDLPLKINFWNSALRAEIKATKPFIRNSEF
                     LWQEGHTVHENRKGADEEVFLILDYYQCIIENFLAIPTIRGIKTEKEKFVGALYTTTL
                     ESLMPDGKALQMATSHNLGQNFSKPFEIRFLGRDSKQYFGWQTSWGLSWRVIGALVMM
                     HGDNKGLILPPKIAPIQLVIVPIFKNKERDIVVEESKKLLAELKKKEFRVILDDREEY
                     TAGWKFNDWEIKGVPLRINIGIRDIKNKNLEIVRRDTGEKILINREDCSDRVTFYLDQ
                     IQRMLFEKAKEIQDNNIIKVFDYEEMKIILKEKGGFILADWCEKEECEINIKNDTGAD
                     IRLVPFNNKPDSQNKCIYCNADSKKTVIFGKAY"
     gene            4306..>4923
                     /locus_tag="VLA74_09480"
     CDS             4306..>4923
                     /locus_tag="VLA74_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HSF50976.1"
                     /translation="MDGINEILSFFDLAGYEQYGYIGILIITFFASIIIFIPVPYFPV
                     LFTAGINQNLDPHLVSLSSAVGAVIAKLLIFYISYYGRNIILSSKAKKRMLPLQRLLS
                     KYGWPGAFAAALTPIPDDLVYIPLGLAKYNPAKFAIATFTGKFILNEFIVYGSVLFGR
                     PVVEVLTAESTDPIYLYIGVGVSISIIILIIFLYLKIDWGRIIGRW"
BASE COUNT         1676 a          735 c          767 g         1745 t
ORIGIN      
        1 tctaatttct ttaggtttta ataattgacc aaaagaggct ccagcagatg ttgaaatgct
       61 ctcattgatc aatgtaccac caaaatcgtt tactcctgct tctaacaaaa cctgtgccat
      121 ttttgggccc tctttcaccc atgatacttg aatgttctct atataattat tcaaaaaaat
      181 tcttgcaatt gcatgcattt ttaatacctc ttctcctgtg ggtccagccc tgatattttt
      241 aacaagattt ctgttataca taggcgcttc actatgaaca aaactcagtg gaacaaattc
      301 tgtaaatcca ccagtatctt tttggatatt ttttattatt gttaggtgtt taacgatatc
      361 tgaataagat tctatatgcc catacataat ggtggaagta gaactaattc caattgaatg
      421 tgcatattta atggctttta tccaatcctg tacagatatt cttccaggag aaattgtatc
      481 tcttatttcc tgatctaata tctctgcagc tgttccaggg atgctatcta atccagcctc
      541 cttgagaatt tgtagataat cttcaataga agaatcggac atttttgcac catacaggac
      601 ttcttctgga gaaaacgcgt ggatatggat atttggaagt tctttcttaa tagctttaca
      661 tatgtctata taaagatagc catccatttt aggaggaagc ccagcttgaa tacatatttc
      721 tgttgctcct aacttttctg cctcttttgc tcttcttaca atctcttcaa taggtaaata
      781 atacccttct tcttctctaa agtctctact aaaagcacaa aaaccacatc ttttaatgca
      841 tacatttgtg aaatttatat ttcgattaat tacatatgtt accatgtcac ctttttttct
      901 tttacaaaga taattggcaa cagtaacaat catattcaat tccaaacctc gggaattgaa
      961 tagttcaatt gtttcagatt ccgttatatc ctttccttca ataactttat ttattatact
     1021 tgaaataatt ggatctatct cttttaaaat atgatcaaaa ttcaactaaa tatattcctc
     1081 ttttactaat ctatctaaat caatgaaact attaatataa ttccttaact ctggagaaat
     1141 aaatccttct ttgtctataa attcaggata tacgggtaat cttgctctca atttttgatg
     1201 cttcgattca gtaatttctt ttaactcttt tatttttggc catgaaaatt caggatttac
     1261 atgatcaatt gttattggcg atattcctcc ccaatcattt attccggcat caagaaatct
     1321 actataatat ccaggagata aatttggtgg gatttggata ttcatatcag gcattatcaa
     1381 tcttgctaag gaaactattt taagaaaata atcttttgtt ggtgaaggaa aatcttgcat
     1441 tctagtgttt attttaggtt gaaaattctg taaaattatc tcttgaatat ttccaaattc
     1501 attattaatt tgttttaaaa gaaaaatgtc atttattact tcttctttgg tttcaccaat
     1561 tccaatcaaa aggccagttg taagtggtat tttcgttctc cctgcatttc taattacttc
     1621 taatctgttt ttagggtttt tacttggtgc aaactcatga gccatatctt tttgaacaag
     1681 tctttcactc gaggactcta acatcaatcc taagcttacg ttatagactt taagtaattt
     1741 catttcttct tttgtaatat tgccaaggtt agaatgaggt aataatccag tctcttttac
     1801 aattttttct gaaatatcaa ttacatattc taccaaggaa ttataaccaa gttgctttat
     1861 ccattccttc gattctttgt atctttcttc tggtctttct cctgcaacaa tcagtgcctc
     1921 cgtacatcta tattttctac cgacttttgc taaattcatt acttcctctg gcttcatcat
     1981 gattgatgat gattcaaaag gattttttcg atatgtacaa tatgaacaaa agtctctgca
     2041 tagattggtt atatttataa aaatttttct agaatatgta acaacttctt ttttgaaatt
     2101 agcctttaaa aatgttgaaa gattcatcaa taatggcata atatcatcat attccaaaag
     2161 atatagagct tcctctcttg aaatagcctt tttattaata ttatctttac atctttcgaa
     2221 aatttcattt attaaattgt cttttattga aattgacgaa atttcttctg tattcaactg
     2281 aacaatatat aaaataataa agtaatttat tttaatttgt ttaaaaaaat tattatagga
     2341 acgatcttat attctattat tagaaaataa gaacatgagt gaatcaaatt ctattgctga
     2401 tatcgataca aaatatgttg ttccagtaaa attatctgat aaagccatga gacttgatga
     2461 aaatgttaaa aatgaattaa aaagtattgg aatgatggat gataaaggaa aactgaaatt
     2521 aaaaggtgta agtccaaaga tgcttaaaag aatgaaattg gaatcagttg attgtcctgt
     2581 tttagaaaaa gaaatctctt ttataccttg ttatgtctgt aagaattttc atagcagaat
     2641 atctggaaag gtatattgtc gtggtgaacc attagtataa taatcattat ttgaatcgat
     2701 cgaatcgaat taagggattt tattgtcgga attaaaagag ataggaatca ctactaaaaa
     2761 agaaggtgac tttagtgaat ggtataccca agtggtgacc aaagcaggac tagtagatta
     2821 ttctcccgtc aagggtttta ttatactcaa accatatgga tatagaattt gggagataat
     2881 aaaagaaacc ttagatagaa aattacaaga atcaggtcat caaaatggat ttcttcctat
     2941 tcttattcca gaaagtcttt tatcaaaaga aaaagaacat tttaaaggct ttactccaga
     3001 agtattttgg gttaccaaag caggagataa tgaattatca gataaattag cggtacgacc
     3061 aacctcagaa actcttgctt atcaaatttt ttcaaaatgg ataatgagtt atagagatct
     3121 tccattaaaa attaattttt ggaattccgc attacgggca gaaatcaagg ctactaaacc
     3181 tttcataaga aactccgagt ttctatggca agaaggccat actgtacatg aaaataggaa
     3241 aggagctgac gaagaagtat tcttgatctt ggattattat caatgtatta tagaaaactt
     3301 tcttgctatc ccaacaatta gaggtataaa aacagaaaaa gaaaaatttg ttggtgcatt
     3361 atatactacc acccttgaat ctttgatgcc agatggaaaa gcattacaga tggcaacttc
     3421 tcacaattta ggtcaaaatt tttcaaaacc ttttgaaatc cggtttctag gtcgcgattc
     3481 aaaacaatat tttggatggc agacttcgtg ggggctctca tggagagtaa taggagcatt
     3541 agttatgatg catggcgata ataaaggatt aatattgccc cctaagattg ctccaattca
     3601 attagtaatt gtcccaattt ttaagaataa ggaacgagat atagttgttg aagaatcgaa
     3661 aaaattattg gctgagctga agaaaaaaga atttagggtt attcttgatg atcgagaaga
     3721 gtatactgca ggttggaagt ttaacgattg ggaaattaaa ggagttccat tgcgaatcaa
     3781 tattggaata agagatataa aaaataaaaa tttagaaatt gtaagaagag atacaggaga
     3841 aaaaatatta attaacagag aagactgttc cgatcgtgta actttctatc ttgaccaaat
     3901 tcaaagaatg ttatttgaga aggctaaaga aatacaggac aataatatta taaaagtttt
     3961 tgactatgaa gaaatgaaga ttatcttaaa ggaaaaaggt ggatttattc ttgcagattg
     4021 gtgcgaaaaa gaagaatgtg aaattaatat aaaaaatgat actggggctg atattagact
     4081 tgtaccattt aataataaac cagattcaca aaataaatgt atatattgca atgcagattc
     4141 caaaaaaact gttatctttg gtaaagcata ttgattaatt atttttgtat atagtgtatt
     4201 ttatttacaa tcatctaaaa tttataattg caacaagttg tattttaatt gaagaaatta
     4261 ttgacttaaa ttacacaaaa aataatccaa tagaagagtc aatatttgga tggaattaat
     4321 gaaatactct ctttttttga cttagctgga tatgaacaat atggatatat cggaatctta
     4381 atcattacat tttttgctag cattatcatt tttatccccg ttccttattt tcctgtgtta
     4441 tttacagcag gaattaatca aaatcttgat ccccatctag tctctctttc aagtgcagtg
     4501 ggagcagtaa tagcaaaatt actaattttt tatattagct attatggaag aaatataatt
     4561 ttaagctcaa aagcaaagaa aagaatgctc cctttacaaa gactgttatc aaaatatggg
     4621 tggcctggtg catttgctgc agcattgacc cctattccgg atgatctggt atatattcct
     4681 cttggattag caaaatataa tccagccaaa tttgcaatag ctacttttac gggaaaattt
     4741 attctaaatg aatttattgt atatggtagt gtgttatttg gaagaccagt agtagaagtg
     4801 ttgacagccg aaagtacgga tccaatttat ctgtatatag gtgttggagt gagtattagc
     4861 ataataattt taattatatt cttgtacctt aaaattgatt ggggaagaat tattggtaga
     4921 tgg
//
LOCUS       DATIAS010000472         2847 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_904089, whole genome shotgun sequence.
ACCESSION   DATIAS010000472 DATIAS010000000
VERSION     DATIAS010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_904089"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..1002)
                     /locus_tag="VLA74_09485"
     CDS             complement(286..1002)
                     /locus_tag="VLA74_09485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50977.1"
                     /translation="MNRITFFFVAISVLSMLILLSVNLSAIADSNSVNIFPPESKPFG
                     LSYVEHEKNFWKWALAIPANENPVNDPTGEKCTNGQSNTNSSVFYLSFNNGGKSERTC
                     TVPAGKGLLIPVMQVVITDKDLPGASVEELATSAKKDQDSVNSLYLKIGNKEYKYKDL
                     YLYRTPTDVFEVIFPDKGIFGILGGGPSKAVADGFYILTKPLTNGTYSIHFKSSLICP
                     DLGCAEPNFAQDIKYNIIAG"
     gene            1589..1888
                     /locus_tag="VLA74_09490"
     CDS             1589..1888
                     /locus_tag="VLA74_09490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50978.1"
                     /translation="MTAAFTSAKLTDRPDRIGEYVGSSGDISGGRHLFLDNTYRISSF
                     MSFFSIWITTAILMNNYREKPTSTIVYWILLSIPFVYFLITYFYQVIFGNLLISR"
     gene            2023..2478
                     /locus_tag="VLA74_09495"
     CDS             2023..2478
                     /locus_tag="VLA74_09495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50979.1"
                     /translation="MAISGFGIFLIFAANQATTQIVIPYPPFGLSSITVLNIAAFFIL
                     LGIYNSATLVSANHDLHKLIRKHALESRLLDIIGQAEMQTEIRKTIKKITQNKDIIEM
                     DKEAEFELDERDLEKYIDSVIREVKKNININHSFKKKYHGYCITLLLLS"
BASE COUNT          953 a          438 c          465 g          991 t
ORIGIN      
        1 actaatttat tacaatttgt gaaaatggat ttgaacctat tactgctgtt catgggatgt
       61 ataatcaata gtattttatt tgcaactaga gactttgctt catatctgaa tcaaagagat
      121 gaactttgtt gtagattaaa aggtattgtg ttacttttgt attcaaaaaa cagatttttt
      181 atttattctt tttaaactat tttgtactaa attggagtgt gaaaatataa aatagaacat
      241 aacgtgagat tatgatcaaa aagaagaggg ttgatatcag tatatctatc ctgcaattat
      301 attgtatttt atatcttggg caaaattagg ctctgcacaa cctaggtctg gacaaattag
      361 actcgattta aaatgaatcg aataagtgcc atttgtaaga ggtttagtta gtatataaaa
      421 gccgtcagct acagctttag aaggaccacc tcctaggatt ccgaaaattc ccttatcagg
      481 aaagataacc tcaaatacgt ctgtaggagt tctatagagg taaagatctt tatacttata
      541 ctctttattg cctattttaa ggtacaaact gttaacacta tcttgatcct tttttgcaga
      601 tgtagctaac tcctctactg aagcacctgg aagatccttg tctgtaatca ctacctgcat
      661 aactgggata agaagacctt ttcccgctgg gactgtgcag gttctttcag atttacctcc
      721 gttattaaaa ctcaggtaaa aaaccgacga atttgtattc gattgaccat tagtgcattt
      781 ctcccctgta ggatcgttaa caggattttc attggctggt atagccagtg cccatttcca
      841 gaagtttttt tcatgttcga catatgatag accaaatggt ttgctttctg gtggaaaaat
      901 atttactgag tttgaatctg caattgccga taagttaacc gataacagaa tcaacataga
      961 caaaacagat atagcaacaa agaagaaagt tatcctattc aagctataat ggtagtctat
     1021 cactccaata caaaaagatt atgtttgagt atatgtactc tgtcaaatat aattaaattt
     1081 gctcattgat cataaaaagt catttagcaa taggaaattt cttattctta tgattgcttt
     1141 agtagtcact attctaattg atacttcagt tgtgaaggtc aatgatctta ttgataaata
     1201 ccttattcct atgcaaagta agttaatatt attttctatt aatagttcat tgtgtctact
     1261 tttacaattt ttgataataa agtatttgca gagctcaatt aaaagagatc gattaaataa
     1321 gacatcgaac gttaagcctt tctatataat tccgttaact tcaatatgtg tactaggaac
     1381 tttgataggc tttttgatat ttcaactgtt ctatcataac tactacgatt catagatctg
     1441 tatcttcata attacaataa gttatggaat agcagcagct tttataatat ggttatcttt
     1501 gttgtttttc tcctagtata aattaaacca taacctgata gtttttttat attttatatc
     1561 gatggtagta atagcattta acttaatcat gacagccgct ttcacaagtg ccaagctaac
     1621 cgacagacca gatcgtatcg gagaatatgt tggaagttct ggtgatatat ccggtggtag
     1681 acatctattt ttagataata cttacagaat ctcttccttt atgtcatttt tcagcatatg
     1741 gattacaaca gcgatcttaa tgaacaatta cagagagaag ccaactagta ctatagtgta
     1801 ttggatttta ttgtctatac cgtttgtgta ttttttaata acctattttt accaagttat
     1861 ctttggcaat ttactaattt ccagatagga aattgatccg ataactcttt ctattatatt
     1921 aggagcattc ctagcattaa acccatcgga ggatttgttt tcggagctac attctggaag
     1981 atatccagaa ttattagtta tgaaagaacc gtcaagacat acatggctat ttctggcttt
     2041 gggatatttt taatatttgc agcaaatcag gcaacaacac aaattgttat tccttatcct
     2101 ccttttggac tttcatcaat aactgttttg aatatagcag catttttcat tttgttaggt
     2161 atttacaatt cggctacact tgtttcagca aatcacgacc tgcataagct tatacgtaaa
     2221 catgccttgg aatcaaggtt gttggacata ataggacaag cagaaatgca gaccgaaatt
     2281 cgaaaaacta tcaaaaaaat tactcaaaac aaagatatta tagaaatgga caaagaagca
     2341 gaatttgaat tggatgaaag ggatttagaa aagtatatag actctgtaat aagagaagta
     2401 aaaaagaaca taaatattaa tcattccttc aaaaaaaagt atcatggtta ttgtattaca
     2461 ctactgttac tatcttgaat aacaaatgat taatcaagtt aaaaagactt ttcttatcat
     2521 ccttagtgca acgatcactc cccgaattat cgtgatagat cggtggatcg gttgaacttt
     2581 ttcaaaaaaa atctgctcct atagaaaagc caactgtaat ttaataatga aacctgagaa
     2641 agaatgacat atcaattggt tagatcttga tgatttagtt tttgttgaag tattctagaa
     2701 accataacta tcaattgtgg atgggattcg attatatgaa aggtagtcag ggaatgtgtt
     2761 taatttaata tgaaagttat tcttaatagt attaaacaat cattatactg ggtttgactc
     2821 gaacaacacg gttgaccgat tttatct
//
LOCUS       DATIAS010000473         2590 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1448851, whole genome shotgun sequence.
ACCESSION   DATIAS010000473 DATIAS010000000
VERSION     DATIAS010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1448851"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..650
                     /locus_tag="VLA74_09500"
     CDS             276..650
                     /locus_tag="VLA74_09500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50980.1"
                     /translation="MLSTSPYRQELEDQEQNIDKSLDDTFDDTFVVSSNNNNENHEQN
                     NDFGRYDSIDDTLHIKVREHLMKGNSLKCHHKNCNDKEFHSLESYNNHCLSLHQKQPM
                     HPELSLIEMMDDLEPKGNPWET"
     gene            958..2115
                     /locus_tag="VLA74_09505"
     CDS             958..2115
                     /locus_tag="VLA74_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50981.1"
                     /translation="MEITKRYLLTLLSVKDIEKTVNSNIDYIMKYVLGYIGINSSSTA
                     YDCQNYLNNIGMKVSYEYVDVQIQNLFKLGLVQKDTNIDKNNNSIEEYESTEKPKNST
                     IYYSISSAGIFYLFRTNPEAIDIELILSNKEDGLFINFLYPYLDFNTVEKIEHTRTIK
                     HITRFLGRCCETIQTELETIRSVEENGGEKHTLGYVEELVNPEYDDGFYGPRAFLQGL
                     KMSSKIKWIDIDNTKIIEVEKGKLFKIHDGKKNGLFLQIYPERNKAVLSDKNHRIKEF
                     NLEKNLSGTYAITYFNPVMVEDYIDERFKNPHFYFYYEIDEYQKEFCNYMLEYMHNEY
                     NIMNEEQRMTKRQDCIAIAKDKNFQEIASDYKQVVDSRYGSFIKLSNVKQI"
     gene            2399..>2590
                     /locus_tag="VLA74_09510"
     CDS             2399..>2590
                     /locus_tag="VLA74_09510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50982.1"
                     /translation="MLSILTDTEKAVVETIRMRLTTEQALQYMKDNGFCVSRATYFRH
                     KKKLEEKKLERLYHMANLGF"
BASE COUNT         1096 a          310 c          405 g          779 t
ORIGIN      
        1 tgaagaataa tggctcatca gaaagacatc agaataatac tctgaatgta atgattgaat
       61 tttcaaacta ctttgattcc aatacaactt tttatgatat caataagaaa gagcaaatat
      121 tatcattttt aaacacaaag ataaaagatt catcaaaaga cccagaaaaa agatgaatta
      181 caagttggaa tcattattta acgagaataa aattatttta tagatggtta tacaacaatg
      241 ataaaaaagg tcatagaaaa ataaagatat gtaaagtgtt gtcaacatcg ccatatcgtc
      301 aagaattaga agatcaagaa caaaatattg acaaatcttt ggacgatact tttgacgata
      361 cttttgttgt atcgtcaaat aataacaatg aaaatcacga acaaaataac gattttggac
      421 gatatgacag tattgacgat actttacata ttaaagtcag agaacacctt atgaagggaa
      481 atagtctaaa atgtcatcat aaaaattgta atgataagga atttcattca ttagaatctt
      541 acaacaatca ctgtctcagc ttacatcaaa agcaaccaat gcatccggaa ctatctttga
      601 ttgagatgat ggatgattta gaaccaaaag gaaatccttg ggaaacataa caaaaaaact
      661 attttagaaa gcttttcaaa aataaaaata agactatttg agttaatatc ttatacaatc
      721 caaaacttat tttaggaaag caataagaat taatatattc tattaaattg acaattatta
      781 agttaaaaga ttataacact tttttgtata ttgtaatgta ggagctaatt attagattca
      841 tatagtctga aaataaatag ttactttttt taaaaagtag attaactcgg agtcattata
      901 tttaaatgta tccatattat agtaacatat aaatatacta taagatatat attatacatg
      961 gaaataacaa aaagatatct attaactctc ctttctgtta aagatataga aaagacagtc
     1021 aattcaaata tagactatat aatgaagtat gtacttggat atattggaat taattcttca
     1081 tctactgcat atgattgtca aaactatttg aacaatattg gaatgaaggt atcatatgaa
     1141 tatgtagatg tacaaataca gaatttattt aaattaggat tagttcaaaa ggatacaaat
     1201 attgataaga ataataattc aatagaagaa tatgaatcaa cagaaaaacc aaaaaatagc
     1261 acaatatact attcaatctc gtctgcagga atattttatt tattcagaac aaatccagag
     1321 gccatagata tagaactaat attgtcaaac aaagaagatg gacttttcat caactttctc
     1381 tatccgtatt tggactttaa cacggtagaa aaaatagagc atactagaac aataaagcat
     1441 attaccagat ttttgggtag atgttgcgag acaattcaga cagagctaga aacaataaga
     1501 agtgtagagg aaaatggagg agaaaagcat acacttggct atgtagaaga gttggtaaat
     1561 ccagaatatg atgatggttt ttatggcccg agagcctttt tacaaggtct aaaaatgagt
     1621 tcaaaaataa agtggataga tatagataac acaaaaataa tagaggtcga aaaaggcaaa
     1681 ctcttcaaaa ttcatgatgg aaaaaagaat ggattattct tgcaaatata tccagaaaga
     1741 aataaagcag tattatcaga taaaaatcat aggataaagg agtttaatct tgaaaagaat
     1801 ctcagtggga cttatgccat aacatatttc aatcctgtca tggtagagga ttatattgat
     1861 gaaaggttta aaaatccaca cttttacttt tactatgaaa tagatgaata tcagaaggaa
     1921 ttttgtaact atatgttaga atatatgcat aacgaatata atataatgaa tgaggaacaa
     1981 agaatgacaa aaagacaaga ctgtatagct attgcaaaag ataaaaactt tcaagaaata
     2041 gcaagtgatt acaaacaagt ggttgactca cgttatggga gttttataaa gttaagcaac
     2101 gtaaaacaga tttagatatt catctttaca aaaatcaggt tcatctccaa tataacaaat
     2161 aatttttaat taaataaggt ggatgttata gtaatatttt gatatactgt atcattgtaa
     2221 agacacgaat agaaaaggaa atgcataaag ctaaccttat ccttattaaa agtatatcgt
     2281 gaatccatat ctatgttatg atggtaggta tatcaatatg agctcattcc atattgttgg
     2341 taggtttaaa aaagcaaatg ttgtacataa cagataagaa ggtgatattt ttagtctaat
     2401 gctaagcata ttgactgata ctgaaaaagc agttgtagaa acaatcagaa tgcgattaac
     2461 aacggaacag gccttacaat atatgaaaga taatggattt tgtgtttcaa gagctacata
     2521 ctttagacat aaaaagaaac ttgaagaaaa gaaacttgaa agactatatc atatggctaa
     2581 tctaggattt
//
LOCUS       DATIAS010000474         3643 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1994080, whole genome shotgun sequence.
ACCESSION   DATIAS010000474 DATIAS010000000
VERSION     DATIAS010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994080"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VLA74_09515"
     CDS             complement(<1..552)
                     /locus_tag="VLA74_09515"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSF50983.1"
                     /translation="MRIKKNRIEELRYNTPPDSVLLYQDEKGPIAAKTYGGPSWCSTQ
                     SKIEKAQKIKGILNTFGVYDHANDKMYTHCYRHKTSDQFIDFIRRVDSRYDSSIKTIF
                     IVLDNASIHRSKKTRNAIVCNYPRIVLVFQPTRSPHLNLIEVRWMWLQRKAINNSTFR
                     NESDIGKAVSDWTCNYNNSHGNIT"
     gene            complement(519..1073)
                     /locus_tag="VLA74_09520"
     CDS             complement(519..1073)
                     /locus_tag="VLA74_09520"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF50984.1"
                     /translation="MYFITTALAYYNVVHVVWNIYIREISTEEMNDLHWLLDNDAESG
                     YRAKMILLRDEGYTVPEIRRITNHHDNNIRKWIHRFNEDGIDGIVSRKHVRNAHKITE
                     DIERKIVEIASNDPRKYKLKFSTWSLRVLAGYIMEEKIIDSISHTEVKNVLVKHGLEW
                     RNSKTILGKSRDPEYELKKIGLKN"
     gene            complement(1499..2290)
                     /locus_tag="VLA74_09525"
     CDS             complement(1499..2290)
                     /locus_tag="VLA74_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50985.1"
                     /translation="MISSGIRLGAWDYLKWKHIVPIKDEKGEVLAAKIIVYAGEHDEY
                     YSFLTPEAYNSLVDWMKFREEYGEKTSEESWLMRDIWQTTNINYGAKWGLATCPKKLN
                     SYAIKRILGRGLWSQGLRRTLENGEKRHEYKAAHGFRKFYKTRTEQVMRPLNIELTLG
                     HDIGLSGSYYKPTEKEVLEDYLKAVDLLTINNNQKVLEKQIIELKQNSKDNEYIIKAK
                     LQEKEEQIQELKKNDKVKEDALASLSDQLLFLTERIQEIERKQSK"
     gene            complement(2308..2778)
                     /locus_tag="VLA74_09530"
     CDS             complement(2308..2778)
                     /locus_tag="VLA74_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50986.1"
                     /translation="MQISDSFIDTIANQGHNRELTPYLMFKYAIKTEITRKYYERRLR
                     KFFDFMEFEIADKDIEDRCNKFAEKAKDNVTWALSQIIRFLQYQKERVENKEITSGTL
                     KNFVKSLKVFCEMADLSIPWKKITRGLPNARQSANDRAPTIDEIKKLLSTLTEE"
     gene            complement(3269..>3643)
                     /locus_tag="VLA74_09535"
     CDS             complement(3269..>3643)
                     /locus_tag="VLA74_09535"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSF50987.1"
                     /translation="QNLLIDKYEGTSPVGSFDPNGYGLFDMAGNVWEWTSDWYVPHLD
                     ESANKVKTCCTTSVNPRVTSPEYSYDPRQPKFKIPRKVVKGGSHICAPNYCLRYRPAA
                     RQPQMIDTGMTHIGFRCIIRRT"
BASE COUNT         1074 a          643 c          510 g         1416 t
ORIGIN      
        1 agttatattg ccatgagagt tattgtagtt acatgtccaa tcagatactg cttttccaat
       61 atcagattca tttctaaatg tagagttgtt aattgctttt ctctgtaacc acatccatct
      121 aacctctatt agattcaggt gtggagatct ggtaggttga aatacaagaa ctattcttgg
      181 atagttacat actattgcat ttcttgtctt ttttgacctg tgtatagatg cattatctaa
      241 tacaatgaat attgttttga tgctggaatc atatctggaa tcgacacgtc gtataaaatc
      301 tataaactgg tcactggtct tgtgtctgta gcagtgtgta tacatcttat catttgcatg
      361 atcgtagaca ccaaatgtat tgagaattcc ttttatcttc tgtgcttttt ctatcttgga
      421 ctgtgtggaa caccatgatg gaccgccata tgtctttgct gctataggtc ctttctcatc
      481 ttgatataac agtacggaat caggaggtgt attgtatctt aattcttcaa tcctattttt
      541 tttaattcgt attcaggatc tctgctttta cccagtatcg tctttgaatt cctccactct
      601 agaccatgct ttaccaggac attctttacc tcagtatgac tgatgctgtc tataatcttt
      661 tcttccatta tatatcctgc aagcacacgt aatgaccatg tagagaattt cagtttatac
      721 tttcgggggt cattagatgc tatctctaca atctttcttt ctatatcctc tgtaatcttg
      781 tgagcattac gtacatgttt tctagataca ataccatcaa taccatcttc attgaatctg
      841 tgtatccatt tacgtatgtt attatcatga tggtttgtaa ttcttcttat ctcaggtact
      901 gtatatcctt catctctaag caagatcatt ttggctctat atccagattc tgcatcgtta
      961 tcgagcaacc agtgaaggtc attcatctcc tctgtactta tttctctgat gtaaatattc
     1021 cacacaacat gaacaacatt atagtaagct aaagcagttg ttataaaata catttatcac
     1081 atttatcatt attattttac aagattgact agatggaata ttacaatgct cttaacagag
     1141 ccagttagac aactataaca taagaatcta acaagaaaat caattatctg aacaactcaa
     1201 gaacaaatta ttttctttat tacaaaaacc ataatatttt acaattttct taaatatttg
     1261 tagtcatatt tctataatat gctaattttg gaagaaatcc aaaatggata gcgaacctag
     1321 ccctaatact tggttaatta gcaatagcac cttctatttt gtatttatgg ttattttatt
     1381 ttgctaaatt aatgctctga ctacatgaaa atctttactg aataccaatt ctaactggtc
     1441 ccactttata gaagggttca aatcccacag aaccctttcc atagacatat ttacaatatt
     1501 attttgattg ttttctttct atttcttgaa ttctttcggt taagaatagt agttgatctg
     1561 ataaactagc taaagcatcc tcttttactt tatcattctt tttaagttcc tgtatttgtt
     1621 cttctttttc ttgtagtttt gctttgataa tgtattcatt atctttactg ttttgtttta
     1681 gttcaataat ctgtttttca agaacttttt gattgttatt tattgtgagt aaatctactg
     1741 cttttaaata atcttctaaa acttcctttt ctgttggttt gtaataagat ccagaaagtc
     1801 caatatcatg acctaaggta agctcaatat ttaatggacg cataacttgt tctgttctag
     1861 ttttgtagaa tttacgaaaa ccatgagctg ctttgtattc atgtcttttt tctccatttt
     1921 caagagttct tcttaagcct tgagaccata aacctctccc taatattctc ttgatagcat
     1981 aactattcaa ctttttagga catgttgcta atccccattt agctccataa ttaatattag
     2041 ttgtttgcca gatgtctctc attaaccatg attcttcact agtcttctca ccatattctt
     2101 ctctaaactt catccaatct actaatgaat tatatgcttc tggagttagg aatgagtaat
     2161 attcatcatg ttccccagca tatacaatta tctttgctgc taagacttct cctttctcat
     2221 ctttgattgg aactatatgt ttccatttta gataatccca agctcctaat cttatacccg
     2281 aagaaatcat tgtataaaca attggtttta ttcttctgtc agggtactca acaatttttt
     2341 gatttcatct atagtaggag ctctatcatt tgctgattgc cttgcatttg gtaatcctct
     2401 ggtaatcttt ttccatggaa tagaaagatc agccatctca caaaatactt ttaaggattt
     2461 aacaaaattc tttagtgttc ctgatgtgat ctctttattt tcaactcttt ctttctgata
     2521 ttgtaagaat ctaattatct gacttaatgc ccaagttaca ttgtcttttg ctttttctgc
     2581 aaatttattg cacctgtctt caatgtcttt atctgctatt tcaaattcca taaagtcaaa
     2641 gaattttctc aaccttcttt cataatattt tctcgtaatt tctgttttaa tggcatattt
     2701 gaacattaga taaggagtca attctctatt gtgtccttga tttgctatag tatctataaa
     2761 agaatcgcta atctgcattt cttaccatgc tatatacaat gggtctaaat aaagacacag
     2821 gtttgtaatg gggccagtgg gatttgaacc cttctataaa gtgggaccag ttacttttct
     2881 tttcttgata gtaaatagaa tcagttaaaa tatagaataa atttttttct taatataata
     2941 atgcaaaaag ttttatcatt tataagattg aaagattttg agaaatctaa attattgatt
     3001 ttctaatctc tagatctaaa tgaattgatt atatctgtta aggaattaac aaataaatgc
     3061 gatttatttt taaattaata atatgtgttt ctgcttgtat atcaaaaaaa caataaattt
     3121 aaatttagac caattctttc aaggtggtat actatattgt tattagttcc aggaaaaatt
     3181 aaaccacaat ccttgacttt ttaatatcag aataaaagat tcatagctcc tataataaat
     3241 gaaatttaaa aaatagcctt atgtattatt atgttcttct gataatacac ctgaagccga
     3301 tatgggtcat ccctgtatcg atcatttgtg gttgtcgagc agcaggccga tatcgtaaac
     3361 aataattcgg agcgcagata tgagaaccgc ctttcactac ttttcttggg atcttaaatt
     3421 ttggttgtct tggatcataa ctgtattcgg gtgatgttac tcgtggattg acagaagttg
     3481 tacagcaagt tttgacctta ttagcagatt catctaaatg tgggacatac cagtccgatg
     3541 tccattccca aacattacct gccatatcaa acaaaccgta accatttgga tcaaatgaac
     3601 caacaggaga agtgccttca tatttatcta ttaataaatt ctg
//
LOCUS       DATIAS010000475         2004 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1312118, whole genome shotgun sequence.
ACCESSION   DATIAS010000475 DATIAS010000000
VERSION     DATIAS010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1312118"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VLA74_09540"
     CDS             <1..630
                     /locus_tag="VLA74_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF50988.1"
                     /translation="QILEYIYKKFPSLERVSSYAMPKNLLQKTDSELMILKNAGLKMF
                     YVGIESGSDIILRKITKGATYKTILQSCKIAKKRDYMLSCMVILGLGGEKYTMEHIED
                     TAKIISEVSPDYVGALNLHLNEGIYNEFMTKFKEPFKFLNDLQILDELERLIYNINPS
                     SPIIFRANHASNVYAVKGTLPTDREKMLELIRQLKNHPEMLKPKILRRF"
     gene            complement(695..>2004)
                     /gene="prf1"
                     /locus_tag="VLA74_09545"
     CDS             complement(695..>2004)
                     /gene="prf1"
                     /locus_tag="VLA74_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor aRF-1"
                     /protein_id="HSF50989.1"
                     /translation="LNEKNLFCYMSSSQDKQSKWDSVRRYKLNKMINKLGNISGHGTE
                     LVTVYIPPRRPIYDIVSQLRNEAGTASNIKSDLTRNHVQDALSRTIEYLKLYKEPPDN
                     GLVIFCGAIPTGKGIGTEKIEIYSVVPPKPIQINLYRCDDHFWIDHLKDMMKDDKVIG
                     ILSLDTQEAGIGILTGDRWEVVESLTSGVAGKHRQGGQSARRFERLRDNELNEYYHRV
                     ADYGKKIFIDEYNVKGLIIGGPGPTKDGFLKEEYLDYRLQNNVIAVLDSSYSGSEGVR
                     EIIDKVNEQGIMADYRLMEEKKIIKNFMSEVYTGKGLGIYGIFEVIDALKNGYADLVL
                     VTDDITFIRLEIKCNKCQHIQEKFIDRNELVSVKQDLISNPCPKCGSQDLESIEQDII
                     EYLEEISIMVGSRLEVISGKTEEGAQLASLGKIGAILRFKQVK"
BASE COUNT          675 a          343 c          250 g          736 t
ORIGIN      
        1 caaatattag aatatatcta taaaaaattt ccttctttag aaagagtatc ctcttatgct
       61 atgcctaaaa atttactcca aaaaaccgat tctgagttaa tgattttgaa gaatgctggc
      121 ctaaaaatgt tttatgtagg aatagaaagc ggaagcgata ttattttaag aaaaattaca
      181 aaaggagcta catataaaac tattttacaa agttgtaaaa tagctaaaaa aagagattat
      241 atgctttcat gtatggttat actaggttta ggtggtgaaa aatataccat ggaacatatt
      301 gaagatacag caaagataat tagtgaagtc tctccagatt acgttggagc attaaatctt
      361 catctaaatg agggtattta taatgaattt atgactaaat ttaaggaacc ttttaaattt
      421 ttaaatgatt tacagatatt agatgaacta gaacgactta tttataatat aaacccgtct
      481 tctccgatca tatttagagc taatcacgca tcaaatgttt atgcagttaa agggacttta
      541 cctactgaca gggaaaaaat gttagaatta attaggcaat tgaaaaatca tccagaaatg
      601 ttaaaaccaa aaatattaag aagattttaa taaatctaaa aaattgaata ataaattatt
      661 ttcaatattt ttaatatttt ttaattatct cactttattt gacttgctta aaccttaaaa
      721 ttgcacctat tttaccaaga cttgctagtt gcgcaccttc ttctgttttt cccgatatta
      781 cttctaatct tgaaccaacc attatagaaa tctcttctaa atactctata atatcttgtt
      841 ctatcgattc taaatcttga ctcccacatt ttggacaagg atttgatatt aaatcttgct
      901 ttacagaaac taattcgttt ctatcaataa atttttcttg aatatgttga catttattac
      961 atttaatttc taatctaata aaggtaatat catcagttac cagaactaaa tctgcatagc
     1021 cattttttaa tgcatctata acttcaaaaa ttccatatat accaagtcct tttccagtat
     1081 agacctcgct cataaaattt ttaataattt ttttttcttc cattaatcta taatctgcca
     1141 ttattccttg ttcgttaact ttgtctataa tctcgcgtac accctcactt ccagaataag
     1201 aagaatctaa aactgcaata acattatttt gtaatctata atctaaatat tcctctttaa
     1261 gaaagccatc ttttgtgggt cctggacctc caataattaa tccttttacg ttatattcat
     1321 cgataaagat tttttttcca taatcagcaa ctctatgata atattcattt aattcattgt
     1381 ctctgagtct ttcaaatctt ctagcggact gaccaccttg tctatgtttt cctgctacac
     1441 cagatgtcaa agactcaact acttcccacc tatcacctgt tagtatccca ataccggctt
     1501 cttgtgtatc taatgataat atacctatta ctttgtcatc tttcatcata tctttaagat
     1561 ggtcaatcca aaaatgatca tcgcatctat agagattaat ctgaataggt tttggaggta
     1621 caacagaata gatttctatt ttttcggttc ctatgccttt cccggtagga atagcaccac
     1681 agaaaataac cagaccgtta tcaggaggct ctttatataa tttaagatat tctatagttc
     1741 tacttaatgc atcttgtaca tggtttctag ttaaatcaga tttgatatta gatgctgttc
     1801 ctgcctcatt tctcaattga gatactatat catatatcgg tcttctcgga ggaatataaa
     1861 cagtcacaag ttctgttcca tggccgctta tatttccaag tttattaatc attttattta
     1921 atttgtaacg tctaacagaa tcccatttac tttgtttatc ttgagaagat gacatataac
     1981 agaaaagatt tttctcattc agac
//
LOCUS       DATIAS010000476         2390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_223621, whole genome shotgun sequence.
ACCESSION   DATIAS010000476 DATIAS010000000
VERSION     DATIAS010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223621"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VLA74_09550"
     CDS             <1..463
                     /locus_tag="VLA74_09550"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF50990.1"
                     /translation="NNVGKGMKIVGNLYYYFFDYYSELKQMVLDLGLTDYITFEINAS
                     LDKLLSIIRESRVYFHPMIGEHFGISVLEAMAAGLIPVVPNEGGLIEFVPQEYQFNTI
                     EQAAEIIMYVFNDLPRTERIKLSNNINKFSNYHYISGFQNILNELLSQRRN"
     gene            complement(470..1501)
                     /locus_tag="VLA74_09555"
     CDS             complement(470..1501)
                     /locus_tag="VLA74_09555"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF50991.1"
                     /translation="MNKAIQDIAGSSTAMLVILGERLGLYKAMAEENKYITFQDLAKK
                     TGTNERLVKEWLGNQVSSGYIEYDPSTEKYFLPPEHALALSDSNSPIYIQGIFKAIKS
                     YFKDEEEFIKMFKNERTFSWFDHHHCMADGFAEFFKAGYLGNLLNLWIPSIENGKIQE
                     KLKQGIKVADVGCGYGISTIMMARAFPNSNFIGFDFHKESIEKANNLAKQENLNNLKF
                     EISSASEFPGTNYDFITFFDCLHDMGDPQGALTHVLNVINKEEGVCMIVEPYAQNKLE
                     DNINPISKTFYAASTLICVPNSLAFNGPALGAQAGEEKIRDVVKKSGFTHFKRAIHTP
                     INIVYEIKL"
     gene            2032..2226
                     /locus_tag="VLA74_09560"
     CDS             2032..2226
                     /locus_tag="VLA74_09560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50992.1"
                     /translation="MPSNTVKYFSCIYCGAEFTAVKPDDIHTKANKHKINRDDIETLH
                     KCNECGKNNKLYWSEQKRPN"
BASE COUNT          844 a          333 c          327 g          886 t
ORIGIN      
        1 taacaatgta ggcaaaggaa tgaaaattgt tggaaatctt tactattatt tttttgatta
       61 ttactcagaa cttaagcaga tggttctaga tcttggtttg actgactata ttacatttga
      121 aattaatgct agcttagata aacttctttc tattatacga gaatccagag tatactttca
      181 tccaatgata ggagagcatt ttggcatatc agtattagaa gctatggctg ctggattaat
      241 cccagtggtt ccaaatgaag gtggccttat agaatttgtt ccacaagaat atcaatttaa
      301 tacaatagaa caggctgctg aaattataat gtatgttttt aatgatttgc caaggacaga
      361 gcgaattaag ctaagcaata atataaataa attctcaaat taccattata tatctggatt
      421 tcaaaacata ttaaatgaat tattatctca aagaaggaat taaaataaat tatagtttaa
      481 tttcatatac gatatttatt ggtgtatgta tagctctttt aaaatgtgta aaaccacttt
      541 tctttacaac atctctaatt ttttcttctc ctgcttgtgc acctaaagct ggtccattaa
      601 aagctaatga atttggtaca catattaatg tagatgcggc ataaaatgtt ttagatattg
      661 gatttatatt atcttcaagt ttattttgtg catatggttc aactatcata caaactcctt
      721 cctctttatt gattacattt aatacatgag tcaatgcacc ctgaggatct cccatatcat
      781 gaagacaatc aaagaatgtt atgaaatcgt aattagtgcc tggaaattcc gaagctgaag
      841 atatctcaaa ttttagattg tttaaattct cttgttttgc aagattattt gctttttcaa
      901 ttgattcttt gtggaaatca aatcctatga agttagaatt tggaaaagct cttgccatca
      961 ttattgtgct tattccataa ccacatccta catctgctac cttgattcct tgtttaagtt
     1021 tttcttgaat ttttccattt tctattgatg gtatccataa atttaataag ttacctaaat
     1081 atccagcttt aaagaattct gcaaagccat ctgccataca atgatgatgg tcaaaccaag
     1141 aaaaagttct ttcattttta aacattttta tgaattcttc ttcatcttta aagtaagatt
     1201 ttattgcttt aaagataccc tgaatataaa tagggctatt agaatcagat aatgctagtg
     1261 catgttcagg aggtaaaaag tatttttctg ttgaaggatc atattctata tatccactag
     1321 aaacttgatt tcctaaccat tctttaacta atctctcatt agttccagtt ttttttgcaa
     1381 gatcttgaaa agtaatgtat ttgttttctt ctgccatcgc tttatataat ccaagtcttt
     1441 ctccaagaat aactagcata gcagtagagc ttccagcaat atcttgtata gctttattca
     1501 tgaattcttg caccttggat tcattgatat tatcttttaa ttgttgattc aataagtaat
     1561 tgatttgaca ttattgattt aaatattgtc attaaaacct tagttaataa taacgtatta
     1621 tataagaaag tataagaaaa ttaagaattc attaatttac tttaaaattc ctttctcaac
     1681 taactcaaag tcaggttctg aatataaaaa cagatttatt tttgagtgaa tccaattaga
     1741 gaactaatat caaaatggac tagtctgatc tgaaacaaat ttgatctaaa acgagctttg
     1801 atagataatc aattgacttt gtaatcatct aaaaaattat agttacagaa tatttgaaaa
     1861 aataaagaat aataaaaaat agtagcagcg atatatatat ataaaattac aatttattga
     1921 aatatatata gatacaaaaa tcattcatac aataacaatg ataaatatat gactatcttc
     1981 gctatttcta gaggataaat ttagattaag aagatgatat atagatttct tatgccatct
     2041 aatacagtta aatattttag ttgtatttat tgtggagctg aatttactgc tgtaaaacca
     2101 gatgatatac atacaaaagc aaataaacat aaaatcaata gagatgatat cgagacatta
     2161 cataaatgca atgagtgtgg aaagaataat aaattatatt ggtctgaaca aaaaagaccc
     2221 aactaattgt agtaaaacat ttgttttgct gtttattatt ttgttacatt atttagtcta
     2281 tctattattt ttttataaga gtcaatgaaa ctttttgcat acatattagc atttttctct
     2341 gaacctttat gaataccacc tttcgtacgt atgtgatgat aaaactcgtg
//
LOCUS       DATIAS010000477         3308 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1177243, whole genome shotgun sequence.
ACCESSION   DATIAS010000477 DATIAS010000000
VERSION     DATIAS010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177243"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..568
                     /locus_tag="VLA74_09565"
     CDS             167..568
                     /locus_tag="VLA74_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50993.1"
                     /translation="MKNTLHQLFALSIVGIMFFSLLFNNIYGESSEVSVIVKVVDVEK
                     FKGQIWNINAQLRDKTNDSELAKDKTTFTVNENQTIQLIIELSNSTKNINNSYIFVDA
                     SSTLDDIDVFGKIESPKKENNLITLNLTKAR"
     gene            complement(626..1549)
                     /locus_tag="VLA74_09570"
     CDS             complement(626..1549)
                     /locus_tag="VLA74_09570"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HSF50994.1"
                     /translation="MKRSNEHKVVLFDPIRSINSGQVFLWKNVNGSWYGINGKEVLKF
                     TVIKKPTINNKKIIATNKVEYQSFPKNELWENFFFRLNDDHEEVYKALSKDEIIYKIY
                     QKYNGLRILRQDPFQCIITFVCASNTNVKRIRHMLTNISKKFGRKIIFDGLEFYLFPN
                     AKELSNASINELTSCGLGYRAKFVKSVATEIESKMLNFEEIKRKHYFESRKELVKLKG
                     IGNKTADCILLFAFEKLNAFPIDVWIYRSLLENYYWLFEDIKKYHSNNKPTNNQYNFI
                     GSRVREYFGENAGYVQQYLYYHVRDTSRRTW"
     gene            complement(1866..3125)
                     /locus_tag="VLA74_09575"
     CDS             complement(1866..3125)
                     /locus_tag="VLA74_09575"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF50995.1"
                     /translation="MEIRVLGAGKEVGRSAFLVSSEISSILLDFGVLLKKEPEFPIHV
                     KPKDINAVVLSHAHLDHSGYVPSLFLSSSNIQVISTMPTMELSQLLIEDMLKISGFYL
                     PFENIEVEKMIKSHTNVEYRSSYEINDLNITLYESGHVIGGSSIIIENKGKKIFYTGD
                     INTRGSKLLRPADLDFDNIDLMIIESTYSQTTQKPREQSERELLEFAYDIIENNGTLF
                     IPAFSVERAQEIACVLKAHNFKYKVVMDGMALKVNEIMLKYPEFLKDSELFINAVENL
                     EWVREWKRRKKVVREPCVIISPAGMLVGGSAIFYMQNMMDYEKNGIALVSYQGENTPG
                     RRLLEERTFKLNGKMKKCFAQVKQFEFSGHNSREELFEILDRIKGNPTVLTVHGDGNS
                     CTRFSEEISEKYGYHSFAPNLGDSYEV"
BASE COUNT         1072 a          556 c          411 g         1269 t
ORIGIN      
        1 tacccaacgc atctctaaaa gatattttct tatcacgata ttaaagatta tttacagcaa
       61 tttcccttat taaaatattg ataaatcttc tttttaacat attttacaaa aaagatttct
      121 aaatttgagt gtattatata aatagatcct ttatcaaatt gtgttcatga aaaacactct
      181 tcatcaatta ttcgctcttt caattgttgg aataatgttt ttttctttat tattcaataa
      241 tatttacgga gaaagttcag aagtcagtgt gattgtaaaa gtcgtagatg tagaaaaatt
      301 taagggtcaa atttggaata tcaacgctca attgagggat aagacaaatg attcagaatt
      361 agctaaagat aaaactactt ttacagtcaa tgaaaatcag acgatacaac taataataga
      421 attatcaaac tctacgaaaa atatcaacaa ctcgtatata tttgtagatg cttcttctac
      481 cttagatgat attgatgttt ttggtaaaat agaatcacca aagaaggaaa acaatttaat
      541 tactctaaat ctgactaaag caagatagta gtaaaatctt ttttaggcgg agctatttat
      601 tttatttaat cttattttat ttattttacc atgtccttct agatgtatct ctaacatggt
      661 aatataaata ttgttggaca taccctgcat tttctccaaa atattcacga actctgcttc
      721 ctatgaagtt atattggttg ttcgttggtt tattattaga atgatacttt tttatgtcct
      781 caaaaagcca ataataattc tccaataagg atctataaat ccaaacatct ataggaaaag
      841 catttagttt ttcaaaagca aataaaagaa tacagtcagc agttttattt ccaattccct
      901 tcaattttac taactctttt ctagattcaa aataatgttt cctttttatt tcttcaaagt
      961 ttaacatttt tgattcaatt tcagttgcta ctgatttcac aaatttagct ctatacccta
     1021 aaccgcatga cgtcaattca ttaattgacg cattgcttaa ttcctttgca ttgggaaaaa
     1081 gataaaattc taatccgtca aatattatct ttctaccaaa ttttttagaa atgtttgtta
     1141 acatatgtct aattctttta acatttgtat tacttgcaca tacaaaagtt ataatacatt
     1201 gaaaggggtc ctgccttaat attctcaatc cattgtattt ctggtatatt ttataaatta
     1261 tttcatcttt tgataatgct ttatatactt cttcatgatc atcatttaac ctaaaaaaga
     1321 agttctccca tagttcattt ttaggaaagg attgatattc tactttattt gttgcaatta
     1381 tttttttatt attgattgtt ggttttttta ttacagtaaa ttttaatact tctttgccat
     1441 ttatcccata ccatgatcca ttgacatttt tccataggaa tacttgaccg ctattgatac
     1501 ttcttatagg atcaaataat actactttat gttcattgct tcttttcata attgcctatt
     1561 ttataataaa tattcataaa gtatgtgctc agctaaattt tctcaaatat tttacgcaaa
     1621 tcattgttta atgtttctat agtttttgga atttctacct ttgcacatgc tatacaaaaa
     1681 gattgtagag ataacggata agagaagtat ctatcattta ataagatttc tttcttgcat
     1741 gaaatacatt tttttagctt aaagggatcg gtattttttg taatcaatca ttatatgttc
     1801 cctttaaatc attttaaatt tatctattta taagtacaga ataatatttt tgaaatcaaa
     1861 atatatcata cttcgtatga atctcccagg ttaggagcaa aggagtgata cccatacttt
     1921 tctgagattt cctcggaaaa tcttgtacaa gagttgccat ctccatgaac tgtgagcaca
     1981 gttggatttc cttttattct atcaagtatt tcgaatagct cttctctact gttatgacca
     2041 gaaaattcaa attgtttaac ttgagcaaaa cattttttca tttttccatt taacttaaaa
     2101 gttctttctt ccaacaacct tcttcccggt gtgttttctc cttgatatga taccaatgct
     2161 atgccgttct tttcataatc catcatattt tgcatataaa aaattgccga acctcctacc
     2221 agcattccag caggcgagat tatcacacag ggttctctaa caaccttttt tcttctcttc
     2281 cattctctta cccattctag attctctaca gcatttataa aaagttctga atcctttaaa
     2341 aattctggat attttaacat tatttcattg actttcaaag ccattccatc catcacaact
     2401 ttgtatttga aattatgtgc ttttaacaca caagcaattt cttgtgctct ttctactgaa
     2461 aaagctggga taaacaaagt tccattgttt tcgataatat cgtatgcaaa ttccagaagt
     2521 tccctttctg attgttctct aggtttttga gtagtttgtg aataagtact ttcgataatc
     2581 atcagatcta tgttgtcaaa atccagatct gctggtctaa gtaattttga gcctcttgta
     2641 ttaatatctc cagtatagaa gattttttta cctttatttt caattattat agaagatccg
     2701 ccaatcacat gaccagattc atataatgta atgttcaaat cattgatctc ataagagctt
     2761 ctatattcca cgttagtatg actttttatc attttctcaa cttcaatatt ttcaaatggt
     2821 agataaaaac cagatatttt caacatatct tctatcaata gctgagatag ctccattgta
     2881 ggcatggttg atataacctg aatattagaa gatgacaaaa ataatgaagg tacataacct
     2941 gaatgatcaa ggtgcgcgtg agaaagaact acggcattga tatctttggg ttttacatga
     3001 attgggaatt caggttcttt tttcaacaaa acaccaaaat ctaataaaat actggagatc
     3061 tcgctactta ctaaaaaagc ggaccgtcca acttcttttc ctgcacctaa aactctaatt
     3121 tccaattaga aattcatgta atctgtggtt acttaaagta ttgtataatg ttgcttaaaa
     3181 aaattttatc tcccataatc tcttgtcatt aattttttca agaaagccaa atcctaattc
     3241 gtctagaact tgttcaaatt cataggtgac agatttacca aatgcttttt cagcttccac
     3301 ttgaccca
//
LOCUS       DATIAS010000478         4116 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1994862, whole genome shotgun sequence.
ACCESSION   DATIAS010000478 DATIAS010000000
VERSION     DATIAS010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4116
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994862"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VLA74_09580"
     CDS             complement(<1..356)
                     /locus_tag="VLA74_09580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF50996.1"
                     /translation="MDFNLIITTYRHKEEEAIEEAIILFERAGDRSVDFVISKVSGIV
                     LGYTNLDQFEFMSKFRQILMDEPWQFRYILRIIPIERSTTTDLKTIQREVENLVQKKI
                     SFNDTYRITVEKRHTE"
     gene            complement(356..988)
                     /locus_tag="VLA74_09585"
     CDS             complement(356..988)
                     /locus_tag="VLA74_09585"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HSF50997.1"
                     /translation="MLIFECNSKEDITRCISIIKQGGVVVFPTDTVYGIGCDPYNEEA
                     IERIFRIKKRSKTKPLPILTHNVESVKKIINLDKIGSELAKAFWPGQLTIIGHLIDDN
                     IPKIVTGGKESLGVRIPNNLCTLELLKGCNFLLGTSANISDTDPSVSAQQILESDLKG
                     YDAILIGENSILKRNVLSSTIVDITQNSLEILREGPIKSEDIYEIISRPK"
     gene            complement(1027..1974)
                     /locus_tag="VLA74_09590"
     CDS             complement(1027..1974)
                     /locus_tag="VLA74_09590"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HSF50998.1"
                     /translation="MKVTIFSHESDLDGIISASIGMIRYPQAKIVFMDYTRESFMKMI
                     KVIDFSNNSSENNLYIISDLGLIDNLINSLRDIFERARTRENKIIWVDHHPWSTNAIN
                     ELKKIIELVLNSSGNRCAAELMYERFLQGNENAEKLASIAHTMDFFTKDQYLTPISEL
                     IKYYLSFNDSDTRLGELSTKISKGILWDLDMDKDYKKYMPLYEKEKEYALTGLIRKDV
                     MDLDVVFVKSSPYLQTSLFAQEIFDITRADLAIFYDKSGKISIRRSNEKIACNEIAEN
                     LIDGGGHKFAAGGNIKSGLSNTEDLISEVEKAIIKTLVK"
     gene            2206..3804
                     /locus_tag="VLA74_09595"
     CDS             2206..3804
                     /locus_tag="VLA74_09595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018039319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine(34) 5-carboxymethylaminomethyl
                     modification radical SAM/GNAT enzyme Elp3"
                     /protein_id="HSF50999.1"
                     /translation="MNYDNYLEACQHIARELQLRKDLSTKDIFKIIKSASSKFKLSIV
                     PKNEDILSYLTTNDRYRDILLVKPTKTASGIAVITVMPKPYDCPHGRCIYCPGGAEYN
                     TPMSYVGTEPATRIAQSVDFDPYLQVKSKLEQLHRRGHNISKIELVIVGGTFPFMPET
                     YQKDFVKSCYDALNDCQSSTLENALKTNEQATNRCVGLTVETKPDYCKEKQIDLMLEM
                     GVTRVEIGIQALDDNVYRLVNRGHTLLDVRESFKLSRDAGYKIVGHMMPGLPGSTPEK
                     DIDNIKMLFENPDFKPDMLKIYPTLVLQGTGLYKLLKNGQYAPYSEDDIVNILMEVKK
                     IIPPWVRIMRIQREIEPADIVNGNRRGNIRQIVLKKLKDDGIFCKCIRCREPMMRRNM
                     FESYQDIKLSRIDFLASGGKEVFLSMESKDNKIIFGFLRLRNILNPRRKELQDNSIPL
                     NATAIVRELHVYGKLIDIGQKNDNGYYQHKGLGLRLMQEAEKISKEEFCVNKISVISA
                     VGTREYYKKIGYIQNGPYVTKLLV"
BASE COUNT         1384 a          661 c          598 g         1473 t
ORIGIN      
        1 aactccgtgt gtcttttttc cactgtaatt ctgtacgtat cattaaatga tatttttttc
       61 tgcactaaat tttcaacttc tctttgaatt gtttttagat ctgttgtggt cgatctctct
      121 attggtataa ttctcagaat atatctgaat tgccaaggct catccatcaa tatctgccta
      181 aatttagaca taaattcaaa ttgatcaaga tttgtatatc ctaaaacaat cccagagact
      241 ttacttataa caaaatcaac actcctatca ccagcccttt caaataatat tatcgcttct
      301 tcaatagctt cttcttcttt atgtctataa gttgtgatga ttaggttgaa atccactact
      361 ttggtctaga tatgatttcg taaatatctt ccgatttaat tggtccttct cttaaaattt
      421 caagggaatt ttgagtaatg tcgactattg tagagcttaa aacattcctt ttcaatatac
      481 tattttctcc aattagaatc gcatcatacc ctttcaggtc ggattccaag atttgttgag
      541 cagaaacgct cggatctgtg tcagatatat ttgcactagt tcctaataga aaattacaac
      601 ctttgagaag ttcaagtgta cataaattgt ttggaattct tactcccaaa gattcctttc
      661 caccagtaac aatttttgga atattatcat ctattaaatg tccaataatg gttaattgtc
      721 ctggccagaa tgctttagcc aactcacttc caattttatc tagattgatt atttttttta
      781 ctgattctac attatgagtc aagataggaa gaggtttggt tttacttctt ttcttaatcc
      841 taaatatcct ctcaattgcc tcttcattat atggatcaca tccaatccca taaactgtat
      901 cggtgggaaa aaccactacg ccgccttgtt tgatgattga aatacatcta gttatatctt
      961 ctttactatt acactcaaat attaacaaat tttaaaattt acaccatttt tcggttattg
     1021 ttattactat ttaaccaatg tttttattat agctttttct acctcggaaa tcagatcttc
     1081 agtatttgat agtccagatt taatatttcc acctgcagca aatttatgtc caccaccatc
     1141 aattagattt tctgctattt cattacatgc aattttttca ttacttcgtc taatacttat
     1201 ttttccactt ttatcgtaaa atatagctag atcagcccta gtaatatcaa atatttcttg
     1261 agcaaatagg ctggtttgta aataaggtga tgattttaca aaaactacat ctaaatccat
     1321 cacgtctttt cttattaggc ctgttaatgc atattctttt tccttctcat aaagaggcat
     1381 gtattttttg taatctttat ccatatctag atcccacaat atccccttcg agattttggt
     1441 actcaattca cctaaccttg tgtctgaatc attaaaactt agataatatt taattagttc
     1501 cgatattggg gtaagatatt gatctttcgt aaagaaatcc atggtatgtg ctatacttgc
     1561 caatttctct gcattctcat ttccttgtaa gaatcgttca tacattaatt cagcagcaca
     1621 tctgttacct gaactgttta aaaccagttc aatgattttt ttcagttcat ttatggcatt
     1681 tgttgaccaa ggatgatgat caacccatat tattttattt tctctagttc tagcccgttc
     1741 aaaaatatcc cttaatgaat tgattaaatt atcaataaga ccaagatccg aaataatata
     1801 tagattgttt tcacttgaat tatttgaaaa atcgattacc ttgatcattt tcatgaagct
     1861 ttctctggta taatccataa agacaatttt tgcctgtgga tagcggatca ttccaattga
     1921 tgcagagatt attccatcca gatcggattc atgagaaaat atggtaacct tcataacacc
     1981 ttctcctatc gtatttctta taagtattca tttcaaagaa tctttttatt aatactctaa
     2041 acacacttta ttacgtttaa aatatatgtt atttctattt ttattctgat atgaataata
     2101 gaataactat tgttcctctt tatattactt gttttctaat gtctattata tccaaaaaac
     2161 acaagcatct tattatcgat ttggagtatg tgatgaatat taatattgaa ctatgataat
     2221 tatcttgagg cttgtcagca tatagcacga gaattgcaac ttagaaaaga tctatctaca
     2281 aaagatattt ttaaaataat caaatcagct tcgtctaaat ttaagctttc tatcgttcca
     2341 aaaaatgaag atatactatc atatttaact acaaacgatc gttataggga tattcttctt
     2401 gttaaaccta ctaaaactgc atcgggaata gccgtaatta cagtaatgcc taaaccttat
     2461 gattgtccac atggcagatg tatatattgt cctggtggag cagaatataa tactcccatg
     2521 agttatgttg ggacagaacc agcaacacga atagcacaat ccgtagattt tgatccatat
     2581 ttacaggtca aatcaaaatt ggaacaactt catagacgtg gtcacaatat cagcaaaatt
     2641 gaattggtta tagttggtgg aacatttcca tttatgccag aaacatatca aaaggatttt
     2701 gttaaatcat gttacgatgc tctaaacgat tgtcagtcat ctacattaga aaatgcatta
     2761 aagactaatg aacaagccac aaatcgctgt gtaggtctta ctgttgaaac taaacctgat
     2821 tattgcaaag agaaacaaat agatttaatg ttagaaatgg gagtaactag agtcgaaata
     2881 ggaattcaag ctttagatga taatgtctat cgattagtaa atagaggcca tactctttta
     2941 gatgttaggg aatcttttaa attatcgaga gacgctggat acaaaatcgt aggtcatatg
     3001 atgccaggat tacctggttc aactcctgaa aaagatatag ataatattaa gatgctattt
     3061 gagaatcctg attttaaacc cgacatgtta aaaatttatc ccaccctcgt tcttcaagga
     3121 accggattat ataagttact taaaaatgga caatatgctc cttattctga agatgatatt
     3181 gtaaatatct tgatggaagt caagaagatt attcccccat gggttcgaat tatgagaatt
     3241 caaagagaaa tagaacctgc agatattgta aatggtaata gaaggggaaa tattcgtcaa
     3301 attgttctta aaaaattaaa agacgatggt atattttgta aatgtataag atgtagagaa
     3361 ccaatgatga gaagaaatat gttcgaatct tatcaagata ttaaattaag tagaatagac
     3421 tttcttgctt caggaggaaa agaagtattc ttatctatgg aaagtaaaga taataaaata
     3481 atttttggtt ttttgcgact aagaaatata cttaatccca gaaggaaaga attgcaggat
     3541 aattctattc cattgaatgc cactgctata gtaagagaat tacatgttta tgggaagttg
     3601 atagatattg gtcagaaaaa tgataatgga tattatcaac acaagggttt aggtttgaga
     3661 ttaatgcaag aagctgaaaa aatatcaaaa gaagaatttt gcgtaaataa aatctcagtt
     3721 ataagtgccg taggaacaag agaatattat aagaaaatag ggtatattca aaatggtcca
     3781 tatgttacca aacttttagt gtaaattatt tctatttgtt atactaacag aatttttata
     3841 aacagattct aataaagaaa taatcacatt ttttatcgta cttgttaatt aaactatgta
     3901 ttgttacgta ctcctgaaat tgtatttggt ataaatctaa taaaatataa acatatagaa
     3961 tacatttaga cgatggtgaa gcttctgttc cttttaaatg taattatttc tatcaattag
     4021 aatagaacat acataggaat agaccttact tgttaattta acttaacgat gtgctattcg
     4081 ttggaaaaac aactttatac tctctactac actatg
//
LOCUS       DATIAS010000479         2061 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1177528, whole genome shotgun sequence.
ACCESSION   DATIAS010000479 DATIAS010000000
VERSION     DATIAS010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177528"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="VLA74_09600"
     CDS             complement(<1..534)
                     /locus_tag="VLA74_09600"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSF51000.1"
                     /translation="MTASILIFSFIYFYYPLLEKTGTSFLAFGIESEHETEEGEEEHA
                     MEENMNVENGFSPALSNSDVKVINNSQVSDLSLSGLKSIGSPVLGNLSAPIMIIEFGD
                     FQCHFCSRFAKQTEPLLNTTYFQTGKVNFVFKHFVTHGSDSFNAALASQCTNDQGKFW
                     NYYNKLYLNQGEENSGWV"
     gene            679..1515
                     /locus_tag="VLA74_09605"
     CDS             679..1515
                     /locus_tag="VLA74_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51001.1"
                     /translation="MSSKKENFEDFNDIYNSHQSLILTTRFGITSAKLIHSVEKNLYV
                     VMAIIVSITVLSILNISGILDYFYSEDVDYHVDVILSIILVLVLAPLISLVIKSRKVL
                     DKWNDMFEKNTITTSMKIIMANRRKEEALKAVVLSIGQITEPFKEYKESTKSDLTEFL
                     DVSLDKNTIFDVAMIADNLPPTTRLKKVLDEFGMILIKIVDGTVDKKTVENLIKSLGS
                     YVSNTHYNIGLVILIGEEISEEAHLFVNQINNNKRVKIDQIILMSKPSLNSHEQFPTN
                     FT"
     gene            complement(1526..1846)
                     /locus_tag="VLA74_09610"
     CDS             complement(1526..1846)
                     /locus_tag="VLA74_09610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51002.1"
                     /translation="MHFKKKRFSSEFTSLSILEYLYLNSQNIPVSKYNIINNTPLIKK
                     QRPDRVNLIILLLESNGYIKKLTISSTSTFYQITEKGKEAYSSWIRHYLEYARNISDL
                     EENE"
BASE COUNT          745 a          294 c          290 g          732 t
ORIGIN      
        1 aacccaacca gaattttctt caccttgatt caagtaaagt ttattataat agttccaaaa
       61 cttgccttga tcatttgtac attgagaagc aagggcagca ttaaaggagt cggaaccatg
      121 agtcacaaaa tgcttaaaca caaagtttac tttacctgtt tgaaagtatg ttgtgttaag
      181 caatggttcg gtttgttttg cgaatctact acaaaaatga cattgaaaat caccaaattc
      241 tattatcata ataggagcag atagatttcc aagaactgga gagcctatac ttttaagacc
      301 ggatagcgaa agatcactaa cttgtgaatt gttaattact tttacatccg aatttgatag
      361 agcaggtgaa aaaccattct ccacattcat attttcttcc attgcatgtt cttcttctcc
      421 ttcttctgtc tcgtgttcag attcaatacc aaatgctaaa aaacttgttc ctgttttttc
      481 taaaagagga tagtagaaat aaataaatga aaatatcagt attgatgcag tcactatgta
      541 taaagtaaaa aatctcatta tcattaatca tacatgaatt ttaaaactat attaattcag
      601 tattaaataa gttatgattg atcataactt tgttatgatt gcagttttat atctggctag
      661 aattattaat cacataagat gtctagtaaa aaagaaaatt ttgaagattt taatgatatt
      721 tataattctc accagtcatt aatacttact actagatttg gtattacatc agcaaaatta
      781 attcattcag ttgaaaagaa tctatatgta gttatggcta taattgtctc aatcacagtc
      841 ttgtcaatac ttaatattag tggcattttg gactattttt attcagagga tgttgattat
      901 catgttgatg tcattctctc aattatactt gtattagtat tagcaccatt gattagcttg
      961 gttataaaat caagaaaagt tcttgataag tggaatgata tgtttgagaa aaacactata
     1021 actacgtcta tgaaaatcat aatggcaaac agaagaaaag aagaagcctt gaaggcagta
     1081 gtattatcaa ttggacaaat aactgaacct tttaaggaat acaaggaatc aactaaatcg
     1141 gatttaacag aattcctaga tgtgtcactt gacaaaaata ccatattcga tgttgctatg
     1201 attgctgaca accttcctcc tacaactagg cttaagaagg tcttagatga atttggaatg
     1261 atattaatca aaatagttga cggaactgta gataaaaaaa ctgtcgaaaa tcttataaaa
     1321 tctttaggct catatgtatc taatacacat tacaatattg gattagtaat tttaattgga
     1381 gaagaaatat cagaggaagc gcatctattt gtaaatcaaa ttaacaataa taaaagagtc
     1441 aaaatagacc aaatcatcct aatgagtaaa ccgtctttaa attcacatga acaatttcca
     1501 actaatttta cctaatctat tgatattact cattctcttc caaatctgaa atatttcttg
     1561 catattctag ataatgtctt atccaacttg aataagcctc ttttcctttt tcagttattt
     1621 ggtaaaacgt tgaagttgaa gatatagtta atttttttat atatccatta ctttctagca
     1681 gtaaaattat gaggtttact ctatctggtc tttgtttctt tatgagtggc gtattattaa
     1741 taatattata ttttgatact ggtatatttt gagaatttag atagagatat tctaaaattg
     1801 agaggcttgt aaactctgat gaaaatctct ttttcttaaa gtgcattctt tgtttatcct
     1861 ctctgatgat tcaatgaaac aatatcacga gttacatata gaatttattg taattatctt
     1921 gcttgatata atgatagtta acatataaaa taagatgtta tttacaatca aattcaatta
     1981 taataaatat aattcataca aaacaaaaat ctataaatca aatactcctc attttttaag
     2041 aatgactaat aacgctatta g
//
LOCUS       DATIAS010000480         4368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1040956, whole genome shotgun sequence.
ACCESSION   DATIAS010000480 DATIAS010000000
VERSION     DATIAS010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4368
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040956"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(632..919)
                     /locus_tag="VLA74_09615"
     CDS             complement(632..919)
                     /locus_tag="VLA74_09615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51003.1"
                     /translation="MNFFFPLNTIVISFTIFLISFSFISQTYSLKINNNLYYFDKISA
                     DSENTFGSLSRSLVEENNKNDESGNDDEQEQSGGSDDEQEQSGGNDDEQEK"
     gene            1102..2676
                     /locus_tag="VLA74_09620"
     CDS             1102..2676
                     /locus_tag="VLA74_09620"
                     /inference="COORDINATES: protein motif:HMM:NF039835.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51004.1"
                     /translation="MIDTTFAQNLLDDNSNQDHQPLSTDSKPIIQVASYPVGIDINSI
                     SNKIYVANQFSNIISIIDPEKAKVITDIEVENSPYGIDINPFTNRVYVTNRISDTVSI
                     IDGFTNKQLATIKVDESPLNLAVNLATNLLYVTNINSQTVTVIDTIENKVIKTLNYTS
                     IPYDVVINPHTNLIYISDLGNNSIQVIDGNNNTLITSIPVDSRPSVMSINILSNLIYV
                     SNFISDTVSVINGTTNKIIKNIKVGENPVGVTINPITNKIYVYNSEDDTVSVINGTTN
                     KSIKQISLKSSIITTGINDPNIAVSPLVTFPFIANKMAIDLSTNFVYLTSTNSNGVLV
                     IDGNTDELVTYIFIDINPPNAGEVNCNNTLIKSEESTAIVVLPVGKSIECKATSNRGY
                     TFSTWSIQNNTNKNPLTFNVTGYGSLTANFKETILTETLIILVSVIIGIVSTIGGWLY
                     RQRSKRVIKRYLAEINYIYEVLSKKHRKECITQLDKLQKEVNLSYRKGKISESQLDFL
                     ENKINSYVNKVNQQLN"
     gene            complement(3075..3260)
                     /locus_tag="VLA74_09625"
     CDS             complement(3075..3260)
                     /locus_tag="VLA74_09625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51005.1"
                     /translation="MNNNKNNKRRGGSLRLMYYYIHVLYSGFSSKETKTEELAKQKTS
                     IEKSCHGLPSRVMYIDP"
     gene            3610..3846
                     /locus_tag="VLA74_09630"
     CDS             3610..3846
                     /locus_tag="VLA74_09630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51006.1"
                     /translation="MSYNNKEKHMKKSVIAIPSIVITTLIYALVATTFFEIDNALGES
                     DFVVDDKTYTQQLVETECKSPCSKSSEMCIAMCA"
     gene            complement(3924..4082)
                     /locus_tag="VLA74_09635"
     CDS             complement(3924..4082)
                     /locus_tag="VLA74_09635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51007.1"
                     /translation="MKCRSCSYQFDPSKEGNSKKRKCGMCCFGDSYSIKSKKEYERNL
                     LIAIIESQ"
     gene            4167..>4368
                     /locus_tag="VLA74_09640"
     CDS             4167..>4368
                     /locus_tag="VLA74_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51008.1"
                     /translation="MLISEYMGEKSSVTINTPGKASLKTTIPISMVRQFGINQGDQLD
                     WSVAKFGENELVMVVRKEGLKLE"
BASE COUNT         1634 a          586 c          575 g         1573 t
ORIGIN      
        1 tgatttttta ttttttttat ttgtttgaat gtaaaaatag cataaatcca tgaatacaat
       61 taattggttc aaatcccatc ttattccgtg aattgaaaat aaattaatta cgttttgaat
      121 gactccacga gttgagcgcc gagagtggga ctcgaacctt cgtccatcaa atgtgggttc
      181 tatattctaa tattaatatt tatttgaact atctagtttt cgcaaaattt gttatacttt
      241 tctaaatcta attgtattac gaaccaaaga aaagtacggg accgtcaggt tgcgaagcat
      301 ttttgcctct atttatttaa attctaatga tattttaaac cagaattgtt ttaccgactg
      361 atcctcttaa attagactct gaatgagatg gtatctttgt ggaatgtaat ctaaataaac
      421 agtctaaaca ctatcctatt aactacaact tattgttata cactctagtt ctctctccaa
      481 taatgattat ctctctatct cattcgttta acgatttgtc gggacggata ttgaatttat
      541 gaattcaata ggataaatgg ggcagaaata ctaaaataat gtagattaag actgttgcta
      601 ttataaataa cagaataata aatttttata attatttttc ttgctcgtca tcattaccac
      661 cagattgttc ttgctcgtca tcactaccac cagattgttc ttgctcgtca tcattaccac
      721 tttcatcgtt cttattattc tcttctacaa gagatctact caaagaacca aaggtgtttt
      781 cactatcggc agaaatctta tcaaaataat atagattatt atttattttt agagagtaag
      841 tttgtgatat aaatgaaaat gatattaaaa aaatagtaaa cgatattact attgtattaa
      901 gaggaaaaaa aaagttcaat tcagttgaaa atattacgct accatgaaat ataaatattt
      961 attaaatttt atatgcctac tattttgttt atattgaatt tttataatag tttatccaaa
     1021 tatctctatt tatatagata ttggttattg aatacctcct tttcaatctt tgctatattt
     1081 ctacttattt cttctttgtt attgattgat actacttttg ctcaaaattt attagatgat
     1141 aatagtaatc aggatcatca accattatca acagactcca aacctataat acaagtagca
     1201 agttacccag taggaattga tataaatagt atttcaaata aaatttatgt tgctaatcaa
     1261 ttttccaata taatttcaat tattgatcca gaaaaagcaa aggtaatcac agatattgaa
     1321 gtagaaaatt cgccatacgg tatagatata aatcctttta ctaatagagt atatgtaact
     1381 aatagaatat ctgatactgt ttctataata gatggattta ctaataaaca acttgcaact
     1441 ataaaagtag atgaatcccc attaaatctc gctgtcaatt tagcaactaa tttactttat
     1501 gttactaata taaattctca aactgttact gtaatagata caatagaaaa taaagttatc
     1561 aagactttga attatacctc aataccatat gatgttgtaa ttaatccgca tactaattta
     1621 atatatattt ctgatttagg gaataatagt attcaagtga tagatggtaa taacaatact
     1681 cttattactt ctataccagt agattcaaga ccttctgtaa tgtctataaa catattatct
     1741 aacttaattt atgtctctaa ttttatttct gatactgtta gtgtaataaa tggcactaca
     1801 aataaaatta tcaagaatat caaagttgga gaaaatcctg taggggttac aataaatcca
     1861 ataacaaaca aaatctatgt atataattca gaagatgata ctgttagtgt aataaatggc
     1921 actacaaata aaagtataaa acaaatttca ttaaaatctt ctattattac aactggaata
     1981 aatgatccaa atattgcagt atcaccattg gtaacatttc cattcatagc aaataaaatg
     2041 gctattgatc tgtcaacaaa ctttgtttat cttactagca ctaattcaaa tggagtttta
     2101 gttattgatg gaaatactga tgaattggtt acatatatat ttattgatat taatcctcca
     2161 aatgctggag aagtcaattg taataatact ttaataaaat cagaagagtc tactgctatt
     2221 gttgttcttc cagttggtaa atctatagaa tgtaaagcca catctaatcg tggttataca
     2281 tttagtacat ggtcaataca aaataatact aataaaaatc cattaacatt taatgttaca
     2341 ggttatggta gtttaactgc aaattttaag gaaacgattt taactgagac gttaattatt
     2401 ttagtatctg taattatagg aatagtttca acaataggtg gatggttata tagacaaagg
     2461 tcaaaaagag tcataaagag gtatttagca gaaataaatt atatttatga agtgttatca
     2521 aaaaagcata gaaaagaatg tataacacaa cttgataaac ttcaaaaaga agtgaattta
     2581 tcatatagaa aaggaaaaat tagtgaatca caattagact ttctagaaaa taaaattaat
     2641 tcatatgtca ataaggtgaa tcaacaatta aattaagtta tatttgattc tcatactttt
     2701 acatctaaag atacatagac aattttaaga attataataa aatgaagaga atttttaaat
     2761 taaattagaa gattgacatg aaagcctaaa ggaaaaaagt atagtttaaa atataatcaa
     2821 tgtggaagtg tttttctata caaataaaat cgaattacct cgttatcatt atataaaata
     2881 tcaaaatgac atgataatag atcactttgc aatttcaaag acaaataaac ctaattatta
     2941 caaggttggt aaactttgaa gatttgcctt atctataaga ttggttggta tagaaatatg
     3001 ttatacatgc tatatataat acttgaagat aatttaatag taatagtaat taccatagcc
     3061 ctctatctct ctgtctacgg atctatatac ataacacgag agggaaggcc atgacaagat
     3121 ttttctatgc ttgttttttg tttggctagt tcctctgtct ttgtttcttt ggacgaaaaa
     3181 ccagaataga ggacatgtat atagtaatac atgagcctca atgaacctcc tcttcttttg
     3241 ttatttttgt tgttattcat taactgcttt aagtatagca ttgtataagc aaaattttta
     3301 gaaaaaatgg gatcatatcc aaactatcta attataattt atacttatat tctaaagtat
     3361 aaacaaatgc taaaaatttt tgtttcaaca aaaatgaaat caatactaag aaatatcaat
     3421 aatacattga tgatgatatt tatcatttta ttatgatata acttgcttat gttgtacacc
     3481 tctagactaa cagtagacca attaaccaat taattaaaaa atctaaaaaa tttccctgtc
     3541 ttttgtatgg ataataaaca tttacagaaa ttattgtcta aaaatgtatt ataatatttt
     3601 tattcagata tgtcatataa taataaggaa aagcatatga aaaaatcagt tattgcaatt
     3661 ccgtctattg taataacgac tttaatatat gcactagtag caactacatt ttttgaaatt
     3721 gataatgctc ttggagaaag cgactttgtt gttgatgata aaacatatac tcaacaatta
     3781 gtagaaactg aatgtaaatc tccttgttca aaatcttcag aaatgtgtat agcaatgtgt
     3841 gcataaacta caagaaagta taaataaaat tttttctgct atttacaata gatatttttt
     3901 gtttttcaat cttgctcgtg ttgttattgt gattcaatta tagcaatcag caaatttctt
     3961 tcatattctt tctttgactt tatagaataa gaatctccaa agcaacacat tccacatttc
     4021 cttttctttg aattgccttc cttcgatgga tcaaattgat atgaacaact tctacatttc
     4081 ataagtatac tatggggtat attttatata aaagtatacc tattttgggg tatacttttt
     4141 taaaacaaca ttataataaa tattatatgt taataagtga atacatgggt gaaaagtctt
     4201 cagttacgat taacactcct ggtaaagcat ctcttaaaac tacaatacca atttcaatgg
     4261 ttagacaatt cggaataaat caaggtgatc aattagattg gtctgttgcc aaatttggag
     4321 aaaatgaact tgtaatggtt gtaagaaaag aaggtctaaa attagaac
//
LOCUS       DATIAS010000481         2406 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1721304, whole genome shotgun sequence.
ACCESSION   DATIAS010000481 DATIAS010000000
VERSION     DATIAS010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1721304"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VLA74_09645"
     CDS             <1..359
                     /locus_tag="VLA74_09645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51009.1"
                     /translation="TIFKDKGQTARVAMKITNNYLDLHKDMINTYNSVYFQILQNILN
                     VSWDGITIPVRFMNSSIDVNKNIYTSSSDATEESMQLLDNIINKNLDTFIKSIELSHR
                     FYKDVIESYLNCIKKL"
     gene            complement(445..1320)
                     /locus_tag="VLA74_09650"
     CDS             complement(445..1320)
                     /locus_tag="VLA74_09650"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSF51010.1"
                     /translation="MQIYLGCSGWSYSDPPEKGGWTKVFYPSSQTKRLSYYSRFFDTV
                     EMDSTFYEKFYKYMTKQTFIGMDNATPENFEFSIKVPETVTHIKRLDVEKGSISSLEE
                     FLDKISPLKIANKLGAILVQLPPSFTVSDFKDTENFLDRLPSGYQYALEFRHPSWNTE
                     GPWEMLKHYDIAAVMTDSPLSDNLQYLAEVTITSKNHSFIRFHGRSSRHRYNYLYSKE
                     ELKHWIGKIKEIASKTNTLRIYFNNHYGAKAVINALEFKDMLGISLSNREKNALEFAK
                     SYYSRTTLDDIIKDQ"
     gene            1724..2260
                     /locus_tag="VLA74_09655"
     CDS             1724..2260
                     /locus_tag="VLA74_09655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51011.1"
                     /translation="MKIQIPFVTMILTIGFLFGAMVDFAFGDSDFTLELNDVNTIPIV
                     TKFEVDGESYMQICPYAICKIEVINSSFTPPNPDNRTMMMIAHSIDFNVKYNNTDTNE
                     GHSQNIFLEKFSESMDECLIHNIIKDEEREIYFCNSGTDVLKRNYDSKSWYYESNGIY
                     DVIKHTYTVKGDFKSDSP"
BASE COUNT          806 a          354 c          363 g          883 t
ORIGIN      
        1 atactatttt caaagataaa gggcaaactg ctagagttgc tatgaagatc acaaacaatt
       61 atctagatct tcataaagat atgataaata cctataactc agtatatttt cagattttac
      121 aaaatatctt aaatgtatct tgggatggca tcactattcc tgtaagattt atgaattctt
      181 caattgacgt taacaagaat atctatacta gttctagtga tgcaacagaa gagtcaatgc
      241 aattgttaga caatattata aataaaaatt tggatacgtt tatcaaatct attgaacttt
      301 cacatagatt ctacaaagat gtaattgaga gttacttgaa ttgcattaaa aagttataac
      361 cgcttttcaa tgtttattta tttctctaaa taattttaat gattgatttt taatttatcg
      421 ataattatgt aatttattac agtattattg atctttaata atgtcatcca aagtggttct
      481 tgaataataa ctcttggcaa attctaaagc atttttctct ctatttgata gtgatattcc
      541 caacatgtct ttgaattcca atgcattaat aacggctttc gcaccataat gattgttaaa
      601 ataaattcgt aaagtattgg ttttactagc gatctccttt atctttccga tccaatgttt
      661 cagttcttcc tttgaatata ggtaattgta tctatgtctt gaacttcttc catgaaatcg
      721 tataaatgag tggttctttg aagtgatcgt aacctctgcc agatattgaa gattgtctga
      781 taatggtgaa tctgtcatta ctgctgcaat atcataatgt tttagcattt cccatggacc
      841 ctctgtattc catgatggat gtctgaattc caatgcgtat tgatatcctg atggcaatct
      901 atcaagaaaa ttctcagtat ctttaaaatc actaacggta aaactaggag gcaactgtac
      961 aagtatagct cccaacttat ttgctatctt cagaggtgag atcttgtcta gaaattcttc
     1021 aagcgatgat attgatcctt tctctacatc caatcttttt atatgtgtaa cagtttctgg
     1081 aacctttatt gaaaattcaa aattttctgg agttgcatta tccatgccaa tgaatgtttg
     1141 ttttgtcatg tatttgtaaa atttttcata gaatgttgaa tccatttcaa cggtatcaaa
     1201 gaaacgagaa taataggaaa gtctttttgt ttgactgcta ggataaaaga ctttggtcca
     1261 tcctcctttc tctggaggat ctgaataact ccagccggaa caccctaaat aaatttgcaa
     1321 tattttatat gatgtcctgg ataaaaaaat cctttctaaa ataaaagaat catttgcaat
     1381 tagaaaagtt cgctgggaag atgttatatt atcttggagt ttaggcgttt ttctttattt
     1441 tataaatgaa gatacctttt gcatttcttc aaaatcctaa gatatgattt tttgttagga
     1501 atgccgcaga atttattgta taatataaca ttcgtcgtta cactagtgtt tatcattaca
     1561 aatatttaat ccagataatt ttacatcatt ttttataatt gcctcggtac atttctggat
     1621 ctgataacag cacattattt tacaactcct atatttcgaa aaaactggat cagagatgat
     1681 taaaaagaaa aagccttaat tatttcatat caatattgta cttgtgaaaa ttcaaattcc
     1741 atttgttacc atgatattaa caataggttt tttatttgga gcgatggtgg attttgcttt
     1801 cggtgattca gattttacac ttgaattaaa cgatgtaaat actataccta ttgttacaaa
     1861 gttcgaagtc gatggtgaaa gttatatgca gatatgtcca tatgctatct gtaaaataga
     1921 ggttattaat agttccttta ctcctccaaa tcctgataac aggacgatga tgatgatcgc
     1981 acattctata gattttaatg taaagtacaa taacaccgat acgaacgaag gtcatagtca
     2041 aaatatcttt cttgagaaat ttagcgaaag tatggatgag tgcttaattc ataatataat
     2101 taaagatgaa gaacgcgaga tttatttctg taatagtgga actgatgttc tcaagcgaaa
     2161 ttatgattcc aaatcctggt attatgaatc taatggaatt tatgatgtaa taaaacatac
     2221 ttatactgta aagggagact tcaaaagcga ttctccataa aaaacaaaag tgtaaatgcc
     2281 atcgtttatc ttaatactta atataaaatt gaatcatttt tagaaatagc gattcaaaaa
     2341 atattatctt ataaattctc aaataattgt ctgttttctt cattataagt gaatgctttg
     2401 agcgtt
//
LOCUS       DATIAS010000482         2032 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1584498, whole genome shotgun sequence.
ACCESSION   DATIAS010000482 DATIAS010000000
VERSION     DATIAS010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1584498"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1119
                     /gene="hemB"
                     /locus_tag="VLA74_09660"
     CDS             142..1119
                     /gene="hemB"
                     /locus_tag="VLA74_09660"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HSF51012.1"
                     /translation="MLSFDNDIYYEFSKQFNLKKSDLIFPLFVNENKNSFQELSYMPG
                     IFKISYDEIIQIVEKIVDQGIISLLLFGIPRLRDNMGKSSFSKNGIIQNSLQLIKSNF
                     GNKITVITDVCVCQYNKTGHCGLVLEKNDKKEVVVNNDLTIELLSKIALSHASAGADI
                     VAPSSMMDGQVRKLRETLDSNGYNNIKILSFSAKQSSSLYKPFRSETFFDNASANEID
                     KSTYQVSYNNPRQIQREIEMDIYEGSDMVLIKPAISSLDLVYRIKKFCKIPIVVQIVS
                     GEYSMIKAASEIGVLDEIYFILNLIYSLKRVGVDKIISYSSFDISKYLL"
     gene            1187..1355
                     /locus_tag="VLA74_09665"
     tRNA            join(1187..1224,1283..1303,1341..1355)
                     /locus_tag="VLA74_09665"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1221..1223,aa:Tyr,seq:gta)
     gene            complement(1384..>2032)
                     /locus_tag="VLA74_09670"
     CDS             complement(1384..>2032)
                     /locus_tag="VLA74_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSF51013.1"
                     /translation="VPNYKYLIKLQEIDFNSSASLACSGLTAYTAIKKSSAMPGENLV
                     IIGAGGLGLMAVQIAKAITNATIIIMDVDDEKLKEAKKLGANITVNSMSSDPIKAVKD
                     ITNGKGCEVLVDFVNNNKTAPTAIEVLRKRGRYIMVGLFGGSLELNLPLVPLRSFNIT
                     GAYTGGFNDLVELVSLFRAGKINSVVSKHYKLEDANKALQDLKNRKIIGRAVFNP"
BASE COUNT          729 a          304 c          308 g          691 t
ORIGIN      
        1 gttaaataat aatggcgatg atagtaatga tactgtagat aaaaaataat aataataatg
       61 atagctttta ttttacaaaa caatgaaata gacaataaaa taatagttta attcgaagta
      121 gtagaataag aagaagaaga aatgttgagc tttgataatg atatttatta tgaattttcg
      181 aaacagttta atttaaaaaa aagtgacttg atatttccat tatttgttaa tgaaaataaa
      241 aacagttttc aggagctatc ttatatgcct ggaattttta agatctcata tgatgagatt
      301 atacagatag tggaaaagat tgttgaccaa gggataattt ctcttcttct ttttggtata
      361 ccaagattga gagataatat ggggaaatcg tcattttcca aaaatggaat aatacagaat
      421 tctctacaat tgatcaaatc aaactttgga aataaaatta ccgttataac tgatgtttgt
      481 gtatgccaat ataataaaac tggtcattgt ggattggtat tagaaaagaa tgacaaaaaa
      541 gaagtagtag taaataatga tctaacaatt gaattactat caaagattgc acttagccat
      601 gcaagtgcgg gagcagatat agtagcacca tcttctatga tggatggaca agtcagaaaa
      661 cttcgggaaa cactcgattc aaatggttat aataatataa aaattctttc gttttctgca
      721 aaacaatctt cttccttata caaaccattt agatcagaga ctttttttga caacgctagc
      781 gccaatgaaa tagataaatc cacataccaa gtatcttata ataatccaag acaaattcaa
      841 agagaaattg aaatggatat ctatgaggga tctgatatgg ttttgattaa acctgcaata
      901 tcttctcttg atcttgtata tagaattaaa aaattttgta aaattccaat cgttgttcaa
      961 attgtttcag gagaatattc tatgataaaa gctgcatctg aaattggagt attagacgag
     1021 atttatttta ttctaaattt aatttattcg cttaaacggg ttggtgtaga taaaataata
     1081 tcttattctt catttgatat ttcaaagtat cttctataat tatattcaat ttctcttttt
     1141 gatatgagtc acaattatat atcataggca caagaaaaac aatcatcccg cgatagctca
     1201 gcctggtaga gctttcggct gtagtagttg gctaatttag ctaaccgtat tttcagccta
     1261 tcaggctaac attaattcag aaaccgaatt gtcgcaggct caaacataat aactaaatat
     1321 atttagttat tatggggcaa atcctgctcg cgggatacaa aaatttaata tggattaaaa
     1381 actttatgga ttaaaaacag ctctccctat aattttacga ttttttaaat cttgcaaagc
     1441 tttgttagca tcttctaatt tataatgttt agaaaccact gaattaattt tgcccgctct
     1501 aaataaagat actaattcta ccaaatcatt aaatcctcca gtatatgctc cagttatatt
     1561 aaaagatcga agtggaacaa gaggcaaatt caattctaat gaaccgccaa acaggccgac
     1621 cataatatat cttcctctct ttctcaaaac ctcgatagct gttggagcag ttttattatt
     1681 atttacaaaa tctactaata cttcacagcc ttttccatta gttatatctt tgaccgcctt
     1741 gatgggatca gaagacatag aatttactgt tatatttgct cctaattttt tggcttcttt
     1801 taatttttca tcatctacat ccataattat tatggtagca tttgttatag ctttggcaat
     1861 ttgaactgcc ataagtccta atcctcctgc accaataatc actaaattct ctccaggcat
     1921 tgctgaggat tttttaattg cagtatatgc agtcaatcca gaacaagcaa gagaagcaga
     1981 tgagttaaaa tctatctctt gtaatttaat aagatacttg taattaggaa ct
//
LOCUS       DATIAS010000483         2635 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_768882, whole genome shotgun sequence.
ACCESSION   DATIAS010000483 DATIAS010000000
VERSION     DATIAS010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_768882"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VLA74_09675"
     CDS             <1..196
                     /locus_tag="VLA74_09675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51014.1"
                     /translation="REGIFGAEETAHHHHQLYCRFRLKNNQKRFGLIMGIGWNMGVLN
                     RLQCAKRLEIKMTTPYAISN"
     gene            378..1751
                     /locus_tag="VLA74_09680"
     CDS             378..1751
                     /locus_tag="VLA74_09680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51015.1"
                     /translation="MQNSAIDRCTGTTTQCTFVGSNFANIYGGSGNYANQINSKTSDC
                     SYGSGCNIISQNSLKIIQSQSSGITQTSDSNNICNDSICLTAIQNEALIGNSDNSQIT
                     QTVFQQNKCLADSNCDIVGSLSASIDGGADNQVVTQQLSQQNYCFINSICYIEGSVPS
                     TGGSNTQINICILGSDCSNNHPDSQLIAIGSVCSTDGSGIKICTPYGIYTVPLIESGQ
                     EQQNNQNSQNLQENNLNSIETNDNTNNNNEGNQTGLQFQFVTNSPGSTSIQKGTNLAE
                     NVNNLPPDDPTISQNIGTYQNFEQIQLVAYSPNTYNEQEMANKVSNIFNGNRQNTLQN
                     SQGEQDVSQLQTIINSQGTQSIQKGSNNIQNSADGFYPLGVEQTVEGIQEILQKQLIE
                     NSLNTYQTETASNQKNNIIVSNGLSTKSFQQLTGNQGINQVQNSVNGVGSIQTLLDSN
                     LLNNKID"
     gene            complement(2093..2569)
                     /locus_tag="VLA74_09685"
     CDS             complement(2093..2569)
                     /locus_tag="VLA74_09685"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51016.1"
                     /translation="MLTTKGKNILIVDDDEDTINLFQTFLEYDGYKVNAFTDPIDALY
                     SFRKNVYDLVLLDLIMPKMNGMKLSQKLKNIDPTLLFRYITAANQEYVEHLKKNNPDI
                     ENIVIYKPIWLNELRSKIHLLLSNQQQQKQQKEDRDKLLMLISIFSSILVSSNLIT"
BASE COUNT         1005 a          378 c          369 g          883 t
ORIGIN      
        1 tagagaagga atatttggag ctgaggaaac agcacatcat catcatcagc tatattgcag
       61 attcagatta aagaataacc agaaaagatt tggattgata atgggtatag gatggaacat
      121 gggtgttcta aacagattgc agtgtgcaaa aagactagaa ataaagatga cgacaccgta
      181 tgctatatcg aattaggcaa caacccctaa tttttcataa gacttttata ttaccttttt
      241 taatgaaaat tatgtataaa aattttatat attataatta tataataaaa agcaatcaga
      301 caacaatcta cacaaccatt ttaattcttc ttactttatt ctctttgcac aatgtctatg
      361 cctctaatca aatgtatatg cagaattctg ctattgacag atgtactggc accaccactc
      421 aatgtacatt cgttggctcc aattttgcta atatctatgg aggctcaggc aattatgcaa
      481 atcaaattaa ttcaaaaaca agtgattgta gctatggttc aggatgtaat attattagcc
      541 aaaatagttt gaaaataatt caaagccaat caagtgggat aactcaaact agtgattcta
      601 ataatatttg taatgattct atttgtttga ctgcaataca aaatgaagcc ttaattggta
      661 attctgataa tagtcaaata actcagacgg tatttcaaca aaataaatgt ttagcagatt
      721 ctaactgtga tattgttgga tcattatctg catctattga tggcggagca gataaccaag
      781 tagttacaca acagctatca caacaaaatt attgttttat caattcaatt tgttatattg
      841 aaggaagtgt tccttcaact ggtggatcta atacccaaat caatatatgc attttaggat
      901 cggattgttc taataatcac cccgatagtc aattgattgc aattggtagc gtctgctcaa
      961 ctgatggttc tggtatcaaa atatgcactc catatggaat ttatactgtg ccattaattg
     1021 aatctggtca agaacaacaa aataatcaaa attctcaaaa cctacaagaa aataatctta
     1081 attctataga aacaaatgat aatactaata ataataatga aggcaatcaa actggacttc
     1141 aatttcaatt tgtaacaaat tcgcctggtt ctactagtat tcagaaaggt actaatttag
     1201 cagagaatgt aaataattta ccgcctgatg atccaactat atctcaaaat attgggacat
     1261 atcaaaattt cgaacaaatt caactagttg catattcacc caatacatac aatgaacaag
     1321 aaatggctaa taaagtatct aatattttta acggaaatcg acaaaataca ttacaaaatt
     1381 ctcaaggtga acaggatgta tcccaattac agacaataat aaatagtcaa ggaacacagt
     1441 ctattcaaaa aggttctaat aatattcaaa atagtgcaga tggcttttat ccactaggag
     1501 tagaacaaac tgttgaaggt atacaagaga tattacaaaa gcaattaata gagaattcat
     1561 taaatacata tcaaactgaa acagcatcca atcaaaagaa caatatcatt gtatctaatg
     1621 gtttatctac aaaatctttc caacagttaa ctggtaatca aggaataaac caagttcaaa
     1681 attctgtaaa tggtgttgga tcaattcaaa ctctattaga ttcaaatctt ttaaataata
     1741 aaatagatta aattataaac taaaaaattt tgaatcacaa atcctaattt ttgctttatg
     1801 gtacaaatag aaaaaaaatt atattcaaaa gtttatctaa tctaaaatta tgtttaatag
     1861 taaaatatgg ctctgttaag ttaagcaaaa ataagcaggt aaagtgaaaa aatctactga
     1921 aattgagcac agaacataat ataaaagtag aatgtatgac tactttaatc cttaagttaa
     1981 cagggccgac acccataatt attatatgat ttattagaaa tttaagttaa acttctatct
     2041 catttaatta ttttcaatat aaatttgtag gtatactatg ttataattaa tgctatgtta
     2101 ttaaattaga agaaactaaa atagaagaaa atattgatat taacatcaat aatttatctc
     2161 tgtcttcttt ttgttgtttt tgttgttgtt ggttggataa aagtaaatga attttacttc
     2221 gtagttcgtt taaccagatt ggtttgtata tgacaatatt ttctatatcg ggattgtttt
     2281 tcttcagatg ttctacgtac tcttgatttg cagcagtaat atatctaaat aataaggtag
     2341 gatctatatt tttcaatttt tgagatagtt tcattccatt cattttgggc attattaaat
     2401 caagtaaaac aagatcatac acattttttc taaaagagta caaagcatca ataggatcgg
     2461 taaaagcatt tactttatat ccatcatatt ctaaaaaagt ttgaaataaa ttgatggtat
     2521 cttcatcatc atctactatc aatatatttt taccttttgt agtaagcatt ttttcatcct
     2581 atgctagtca actatcagta ttctttatta agattagaga caattattga cggtt
//
LOCUS       DATIAS010000484         3662 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1451117, whole genome shotgun sequence.
ACCESSION   DATIAS010000484 DATIAS010000000
VERSION     DATIAS010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451117"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..356)
                     /locus_tag="VLA74_09690"
     CDS             complement(69..356)
                     /locus_tag="VLA74_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51017.1"
                     /translation="MKSKRYRTSNNKFWRNYYKMMSRAYYKRGLKNGERILPSGFFEG
                     QMRGALDKCWLGFIIAKEKGEWDKIDLYAKRIQNIEKDLGKEITNFSDWGV"
     gene            complement(690..1004)
                     /locus_tag="VLA74_09695"
     CDS             complement(690..1004)
                     /locus_tag="VLA74_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51018.1"
                     /translation="MSKRQVEIELPAKVWEIIESQFKLNDESDSEILSKIIKNHLASN
                     GYYPDADSLQQGNGLKDIVDIHQDMIITLLDLLERKGLIIHKEWNQLMQERIKTDTET
                     FN"
     gene            complement(1110..1436)
                     /locus_tag="VLA74_09700"
     CDS             complement(1110..1436)
                     /locus_tag="VLA74_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51019.1"
                     /translation="MIDSTDCLKPYCIFWFLTKSSNAVCTFHFSRIQLVFSSLAILIL
                     LAAISSVPIGVTAFAQGEIIQYQLACPAGYECYCTPDSGVWHSIPEDGGQGGFSINAG
                     CTEADK"
     gene            1680..2027
                     /locus_tag="VLA74_09705"
     CDS             1680..2027
                     /locus_tag="VLA74_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51020.1"
                     /translation="MLLVALAGMMLFTTTASADVEDYIKAMCEQHDGKWSDKNMACND
                     FESETEQWNFGDALMTREEYDEITGQCEEKDGEWSDEKVKCTISDPVERTAFEDAICD
                     DGPTKICQLSNRN"
     gene            complement(2621..3001)
                     /locus_tag="VLA74_09710"
     CDS             complement(2621..3001)
                     /locus_tag="VLA74_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51021.1"
                     /translation="MSLIGEKALAITPTDYNLIDQDNNNLLFRQMVYDAGFWTYPSSD
                     RGQSDRNNAGVGFIVVSYADGGSVVGSYADGYELGKENGRDDYRIGKEHNSKCPPNDS
                     FSWCAGYKIGYEAGWVAAMTLGGK"
     gene            complement(3264..>3662)
                     /locus_tag="VLA74_09715"
     CDS             complement(3264..>3662)
                     /locus_tag="VLA74_09715"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HSF51022.1"
                     /translation="VLTNTKYNDKRKYPDDKLRALISHFNSPRLRNEDLQKEDIFGDA
                     YEYLLAEFADETKKKGGEFFTPREIVCLLVNLVEPKEGMKICDPTCGSGGMLIESRKF
                     VERNNGNPRDLVLEGQESNYSNLAMCKMNM"
BASE COUNT         1219 a          596 c          546 g         1301 t
ORIGIN      
        1 gtaatctcta ctactaattt agattatttt tcctgtttaa ttataccatt atgggcttct
       61 ttatattatt aaactcccca atcagaaaag ttagttatct cctttccaag atctttttct
      121 atgttttgta tccttttagc ataaaggtct atcttatccc attcaccttt ttctttagct
      181 attataaaac caagccagca tttgtctaag gctcctcgca tctgaccttc aaaaaatcca
      241 gatggtaaaa tacgctctcc atttttcaaa cctcttttgt aatatgccct agacatcatt
      301 ttgtaataat ttctccaaaa cttgttatta gaggttctat atctttttga tttcatatac
      361 tagcaaataa caataaggag ctaaagttaa taagatgaca aaaaaaattt gacgtaacaa
      421 cgacaataat aattgacgta acaacgacaa taattggagc aacgatgtca gcaacaacta
      481 caactattat tggcaataag ctttagttta tgatagaaat aattttttga gtatagctac
      541 aaagatatcc tctcatacga tactatattt taaaaacttt ttgctacttt gctttgtatg
      601 ttagtagtat tgttacataa atcaataata tattagagac agttgtgact atcataagta
      661 tatattttaa aagtcgtttt ttattttatt tagttaaaag tttcagtatc tgtctttatt
      721 ctttcttgca taagttgatt ccattcttta tgtattatca aaccttttct ttctaacaaa
      781 tctaatagag ttatgatcat atcttgatga atatcaacta tatctttaag tccatttcct
      841 tgttgcagac tatcagcatc tggatagtat ccgtttgaag ctaaatggtt cttaatgatt
      901 ttcgatagta tttctgaatc tgattcgtca tttagtttaa actgactctc tatgatttcc
      961 catacttttg cgggtagttc tatttcaact tgtcttttac tcatcagtct tacaattatt
     1021 attatatgct atgtttatat cattttttaa taatttactt ctcaaactct ctaaataata
     1081 ataaggagta aaagaaaaaa agggattatt tatttatcgg cttctgtaca accggcatta
     1141 atactaaatc caccttgacc tccatcttca ggaatagagt gccaaacacc tgaatcaggt
     1201 gtacagtagc attcataacc tgcaggacag gctagctggt attgtataat ttcaccttgt
     1261 gcgaatgctg ttactccaat tggaaccgat gatattgctg ccaataatat aagaatggca
     1321 agtgacgaaa agactaactg tattctagaa aaatggaaag tacagacagc atttgaagac
     1381 tttgtgagga accagaagat acagtaaggt ttaagacaat ctgttgaatc gatcaaaagt
     1441 cttaattatt caatctatca tcccgttaac acacctagat tttcttcgta ttaaagaaat
     1501 tgctatgatt atgataaagc ggaccaaaat tataaagtta tttgttaaag ttgagagtat
     1561 aattaactag agtttggtat accatatatt attttaaaag ttttcataat gtttttagag
     1621 aatgattttt gttctatctt taaataattc tattacttac taatagaaga atgttatata
     1681 tgttgctagt ggccttagca ggtatgatgt tgtttactac aacagcttcg gctgacgttg
     1741 aagactatat caaggcaatg tgtgaacaac atgatggaaa atggagtgac aagaatatgg
     1801 catgtaacga ttttgaatca gaaacagaac agtggaactt tggtgatgct ttaatgacta
     1861 gagaagaata tgatgagata acaggacaat gtgaagaaaa agatggagaa tggagcgatg
     1921 aaaaagttaa atgtacaatt agtgatccag tagaacgaac tgctttcgag gatgctatat
     1981 gtgatgatgg acctactaaa atttgtcagc taagtaacag aaactaaatt ctattacttt
     2041 ttaagctcct agagcttatc ttatttatta tgtttggatt tataatagga gctacattag
     2101 gagaagcatt tgcagcagaa tatgacaagg aagcatgtca agatttctat tgagattgag
     2161 aagacagata atgtaaattt agagatggag attggacagt aaatgaaggt tttttctaca
     2221 aggttgtatg tttaggtgac gttagtgaaa gtgcgaaaaa catagactat cggtacaaga
     2281 cggtgacgat taaatactac tttttattat ttgaataagt tatctgacac tattaatatt
     2341 agatgtggat cttgtactca tcattctatt aattattata tatgatactg gtattgttca
     2401 tgcgaatagc tgtaaatgca gaatcaatct ttatcaaaat ggataagaaa gttcatgcag
     2461 ggatgtaaac aagtataatt tacaggcata ttgcaaaaca tttcaatcca ttcataacaa
     2521 tataagaacc aaggcgagag aggaaagatt catggaaatt ttctgtagtt agcagccgaa
     2581 acattcagaa ataagagcac atcttttttt gttaaatctt ctattttcct cctaatgtca
     2641 tggcggcaac ccaaccggcc tcataaccga tcttatatcc tgcgcaccat gaaaaactat
     2701 cattaggagg acattttgaa ttatgttcct tgcctattct ataatcatct cttccgtttt
     2761 ctttacccag ttcatatcca tctgcataac ttcctactac agagcctcca tctgcataac
     2821 ttactacgat aaaacctact cctgcattat tgcgatcact ctgacctcta tcacttgagg
     2881 gatacgtcca aaaaccagca tcatatacca tttgtctgaa caataaatta ttattgtctt
     2941 ggtctatcaa attataatca gtcggtgtaa tagctaatgc tttttcacca attaaactca
     3001 atacaaagat gccagtaatg ctaacaataa gaattgtata tattatgtag tccctaacag
     3061 ttaataatcc aataattcga tttaactgta atattctact ataactaact tatagaatta
     3121 tttaaggttt aagcataatg attttgtaag atttttagca tattaaatat tgaaaaattg
     3181 tctgttattt caacaaaaaa aataatttac tgttataata ataacctttt tttagtatct
     3241 ctacaacttc tgcattcctc tttctacata ttcattttgc acattgcaag attactatag
     3301 ttgctttcct gtccttctaa aactaagtct ctaggattac cattatttct ttcaacaaat
     3361 tttcttgact cgataagcat acctcccgaa ccacaagtag gatcacaaat cttcattcct
     3421 tcttttggtt caactagatt aacaagtaaa cagacaattt ctctaggggt aaagaattct
     3481 cctcctttct tttttgtctc atcggcaaat tccgctaaaa gatattcata tgcatctcca
     3541 aagatatctt ccttttgtaa atcttcattt cttagtcttg gagaattaaa atgagatata
     3601 agagctctaa gcttatcatc aggatatttt cttttatcat tgtattttgt atttgttaat
     3661 ac
//
LOCUS       DATIAS010000485         2147 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_906434, whole genome shotgun sequence.
ACCESSION   DATIAS010000485 DATIAS010000000
VERSION     DATIAS010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_906434"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VLA74_09720"
     CDS             <1..481
                     /locus_tag="VLA74_09720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51023.1"
                     /translation="DLHSVLKKDEVGCINRLKLQKYVYLAQTCLNNDFGYEFSIYNNG
                     PYSPELANYYYENMDSDRISNDLRKRKWNSDSDLTKNFLTLFKEKELEWLIISSTLID
                     STNYLEYEQEILNKVYAMKSDYSKSYIDDVWNELKDNGLVKYESGLKLNKILPVFHI"
     gene            700..936
                     /locus_tag="VLA74_09725"
     CDS             700..936
                     /locus_tag="VLA74_09725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51024.1"
                     /translation="MKNGSYNVNHDSTYDKIKHLVEVDDDILAVFSLISTKINELYIA
                     ENANIERNYIDSIVSNLGLTQTSYNEKMQELPKM"
     gene            1229..>2147
                     /locus_tag="VLA74_09730"
     CDS             1229..>2147
                     /locus_tag="VLA74_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF51025.1"
                     /translation="MAVESDFIHIIISLSILLFTAKIFAEIFQRIRQPVVLGELLAGI
                     IVGPYALGGLPLFDGQPLVVIDETVKHIGELAAVIILFIAGLEITPKEFLRGGAASFT
                     VGTLGVVVPFFVGFVILSIYGLDTFEILLIATALTATSIAISIQVLSEIGKMQSKEAR
                     LILGAAIVDDILAIAILSVVVTMVQSGDSIPQVTDIAFLILKILGLFAVLLVGSVFII
                     PRILHREKLWRSKGSIEGITTAIFFGIAGVAAYVGLSPIVGAFAAGMAVASTKLIKQV
                     EEYAHKLQFIFAPLFFAIIGAQVDLRGINL"
BASE COUNT          751 a          300 c          374 g          722 t
ORIGIN      
        1 tgatctacat agcgttctta aaaaagacga agtagggtgt attaaccgat taaagctgca
       61 aaaatatgtc tacctggctc aaacttgctt gaataacgat tttggttatg aatttagcat
      121 atataacaac ggtccatatt caccagagct ggcaaactat tattatgaaa atatggacag
      181 tgatagaata agtaatgacc taaggaagag aaagtggaat tcagacagtg accttacaaa
      241 aaatttcttg actttattca aagaaaagga actcgaatgg ttgataatat cttctactct
      301 aatagatagt actaactatc ttgaatatga gcaagaaatt ttgaataaag tttacgcaat
      361 gaaatctgat tatagtaaaa gttacataga tgacgtttgg aatgaattaa aagataacgg
      421 tttggtaaaa tatgaatcgg gtctaaaatt gaacaagatt ttgccagtat tccatatatg
      481 attcttgttt ccaacgaccc tttgaacctt atttcataat agcgcaaatg gtcattaact
      541 ttcttttaat tgagtttgac agccatatac taaattatat ttgattataa aactaccaaa
      601 tacctatatt attattatta ttattattta gccactggtt acatatgaaa taattaagca
      661 tattaaaatg atatatttct ctataattac tcatatgcaa tgaagaacgg ctcatataat
      721 gtaaatcatg atagtactta tgataaaata aaacatttag ttgaagtaga tgatgatatt
      781 ttagctgttt tttcattgat ctccactaag ataaacgaat tgtatatagc cgagaatgct
      841 aacatcgaaa gaaactatat agattcaata gttagtaatt taggattaac tcaaacgtct
      901 tacaatgaaa agatgcagga attgccaaaa atgtagaaat agaaaatgaa attttgggca
      961 aactaaaatg ggttgtggta gaatatgaaa atataagatt cttaaaatat atgaatctat
     1021 taaaacaata tttgttttaa taaaaagcaa tacttcatta caacacactg tcgataatat
     1081 tttaggttat tattacgatt tagacgaaac accaaaaagt ctattctaaa atgaaatatc
     1141 attatctaga gaatactccc ttggccatag atacagacat gatatgtata ttattatatt
     1201 gaaaccaaaa taagatacgg tatagactat ggcagtagag tcagatttca ttcacattat
     1261 aatatcacta tctattcttc tctttactgc taaaatattt gcagagatat ttcagaggat
     1321 aaggcagcca gtagttttag gtgaactatt agccggaatc atagtaggtc cttatgcttt
     1381 aggaggttta ccattatttg atggtcaacc attagtagtt attgatgaaa ctgttaaaca
     1441 cattggagaa ttagcagccg ttataatctt gtttattgca ggactagaaa ttacacctaa
     1501 agaatttctg agaggtggtg cagcttcatt tacagttggt acattaggag tagttgttcc
     1561 attctttgta ggttttgtta ttctttcaat ttacggactc gatacatttg aaatattgct
     1621 tatagccact gcgttaacag ctacaagtat agcaatttcc attcaagtat tgtctgaaat
     1681 aggaaaaatg caatcaaagg aggctcgact catacttggt gcagcgatag ttgatgatat
     1741 tcttgctata gccatattat ctgtcgttgt tacaatggtg caatcaggtg atagtatacc
     1801 gcaagtaaca gatattgcat tcctgatcct gaaaatcctt ggtttatttg ccgttttact
     1861 tgttggctct gtcttcataa ttccaaggat attacataga gaaaaattat ggaggtcaaa
     1921 aggaagtatt gaaggaataa ctacagctat tttctttgga attgctggtg ttgcagcata
     1981 tgtgggctta tctccaattg ttggcgcatt tgcagcaggc atggctgttg ctagtacaaa
     2041 gctaattaaa caagttgaag agtatgctca caaattgcag tttatttttg ctcctctatt
     2101 ttttgcaatt ataggtgctc aagttgattt aagaggtatt aatttgg
//
LOCUS       DATIAS010000486         2059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_633486, whole genome shotgun sequence.
ACCESSION   DATIAS010000486 DATIAS010000000
VERSION     DATIAS010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633486"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            460..1044
                     /locus_tag="VLA74_09735"
     CDS             460..1044
                     /locus_tag="VLA74_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51026.1"
                     /translation="MTFMYIVLPSLSLTVLLILTITGTISNAFGQSLQMPEFKSKSTV
                     GSDTITENNLSDEIALKVQFEPHENQFLADNDWYQVSDFAFAASNNSKLCPSVSCQYG
                     LIDGEMREAFAAGERSLDGKFIINTGESKIIFDLRANWEAVKERDVNGDLSQLIEGKL
                     EIGIGTNPQFEYAINGTLTADDDGYILEGTGLKK"
     gene            1436..>2059
                     /locus_tag="VLA74_09740"
     CDS             1436..>2059
                     /locus_tag="VLA74_09740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51027.1"
                     /translation="MTYYFINEDLVFSQQNKYEDLIIGIKYQQENSSNFDIFGIKKIY
                     PTKKSGFEWFMNNYDPESDPYLHNYKSIIRNDEDDGSYSIGERSRMGVYSKDGIGYPK
                     GNMETYNFTELSKKGYWYKPTDWKNVEITGEYLYKIGEGPGITHYARSEHHSLINNGC
                     GGSSYKLKIHFDGTSSISKEQTHPKPWKIQINKGPFGKLDKDWFGFKG"
BASE COUNT          766 a          264 c          340 g          689 t
ORIGIN      
        1 ctataatatg ataaatatgt atatgataaa tatgtatatt cctcatgtat atatatacgt
       61 tcttaatact gattgatcta tctaaagtat ctatccaaga ccgcaattat aaagcacttt
      121 tagatatatt tggctcaaat atctctagcc tcgaatacaa ttttaaacct agcattatcg
      181 acacgagtaa aaataaataa aacaaagtat atcatatatt ataaaagccc aactaaagta
      241 tatgagcgtc ttaaatcttc tctaatagat atatttgcaa gggccgtcgg gagttgaata
      301 gacgttattt tagtgttcaa taactgtttg attggcagaa gtaatatcgc tacagtaata
      361 aaatagatta attaattaat tcaaataagt tctctgacca tatggctgga atcataaaat
      421 ggataaatgt attaatttaa gtttaactat ataataacga tgacatttat gtacatagtt
      481 ttacctagtc tttctttaac ggttcttcta atattgacaa taacaggtac aatatcgaat
      541 gcgttcggtc agtctcttca gatgccagag ttcaaatcca aatctactgt ggggagtgat
      601 acaataaccg aaaataatct gagtgatgaa attgcattga aagttcaatt tgaacctcat
      661 gagaatcaat ttttggctga taatgattgg tatcaggttt cagactttgc atttgcagcc
      721 agtaataaca gtaaactatg tccctctgta agctgtcaat atggacttat tgatggagaa
      781 atgcgtgaag cattcgctgc aggtgaaaga tcattagatg gaaaatttat aataaatact
      841 ggtgaatcaa agataatatt tgatttaaga gctaattggg aagcagtgaa agaacgtgat
      901 gtaaacggtg atcttagtca actgatagaa ggaaagttag aaataggtat aggtacaaat
      961 ccccaattcg aatatgcaat caatggaaca ttaacagcag atgatgatgg gtatatctta
     1021 gaaggaacag gactaaagaa ataaagtcat ttgatgattt aagttataat tttttatttc
     1081 tgttttttat tctgaagttt ttgattatat ctcaatttac agtctaaaat atattattaa
     1141 tttatttatc cctcattact tccaaatatc ttttttatgg cttcttgatt gctgttacta
     1201 acagtattaa attcagtatt gttaatgttt ttttcaaata gtttctatta tcattaaagg
     1261 atttgaaatt tttcatgaat aatttaaccc gtaataaaaa tatccaattc cagctaattc
     1321 taattgtcta aaaccttttc taatctatac taataatatt gtatttgtgg aaaaggaaaa
     1381 aattataaaa actagtttaa taataatcct tttttcgttt tttctgttaa tagttatgac
     1441 ttattatttt ataaatgagg atttggtatt ttcacaacaa aataaatatg aggatctgat
     1501 aataggaata aaatatcagc aagaaaattc tagtaatttc gatatatttg gaataaaaaa
     1561 aatctatccc actaaaaaaa gcggttttga atggtttatg aataattatg atccagaatc
     1621 agatccatac ttgcataatt ataagagtat tataagaaat gatgaggatg atggtagtta
     1681 tagcataggt gaaagatcta gaatgggagt atattccaaa gacggaatag gttatccaaa
     1741 aggaaatatg gaaacttata actttacaga gctctcaaaa aaaggctatt ggtataaacc
     1801 tacagattgg aagaacgtag aaattactgg ggagtattta tataaaatag gcgaaggtcc
     1861 aggtataaca cattacgcta gatccgagca tcattctctt ataaataatg gatgtggtgg
     1921 atcaagctat aagcttaaaa tccatttcga tggaacaagt agtataagca aagaacaaac
     1981 ccatccgaaa ccatggaaaa tacagattaa taaaggtccg tttggtaaac ttgacaaaga
     2041 ttggtttgga tttaaaggt
//
LOCUS       DATIAS010000487         4078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1451488, whole genome shotgun sequence.
ACCESSION   DATIAS010000487 DATIAS010000000
VERSION     DATIAS010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4078
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451488"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VLA74_09745"
     CDS             complement(<1..253)
                     /locus_tag="VLA74_09745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51028.1"
                     /translation="MIKNYLSLFTYSKWFYAEKSVIYILLFTYLFITIVPLIWVLSTS
                     LKSNEEATSIPPQFIPNNPTVENYLFVITEPHIVNSLFNS"
     gene            complement(284..1159)
                     /locus_tag="VLA74_09750"
     CDS             complement(284..1159)
                     /locus_tag="VLA74_09750"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HSF51029.1"
                     /translation="MLILKNFEPYLFLLPGIIILFLFLFFPLLWNIYISLHDVSILTI
                     IKEWEFVGFKNFNNIFADPNFFNSLKVTLVFVLGTVLLQFGIGLLIALLLNQQIRASG
                     LFRTLFIIPWTVSTVITGFSFKFLFDDNFGIINYGIEKLGLDSIQWFSDPALAIWTII
                     IANTWYGTPFTILFLTAGLLSINPTLYEAAIIDGATKFRRFIYITLPLLKPFILTNLI
                     LVTVWTINFFDLQLIMTNGGPLFSTTTMSLYMYKQAFEFGYFSEGAAVGILLIIMNIS
                     VALVYIRLFDGRNKK"
     gene            complement(1212..2579)
                     /locus_tag="VLA74_09755"
     CDS             complement(1212..2579)
                     /locus_tag="VLA74_09755"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSF51030.1"
                     /translation="MINNNSSSNNEFFYKSKLPTSKFLIIVSFVMLSLLFISIINFIP
                     IIAQEEITLNAIFAEPKERWEILLENATKILNERHPDKKIKIDFRVLPYSDTRTQILT
                     AMAGKTPIDLVSIDQIWLGEFAEGGFLSDLTSNTKKWNKSSDWYSQNWEGGLYNDQVK
                     GIWAWTDVRGLWYWKDLLDKVGINPDQLKNWNGYISSSKKLNEILDKDGIQAMHLVGA
                     NHSPDMWYPYLWMLGGEILEKRDGHPTKSNYWFPIYNNELGVKALQFLKDQVDAGIRP
                     QINHFWGQEFADKKFAVMLEGSWILGQFPKIEWNTLDEKIGMIPMFPVPSGSNSTNTS
                     TLMGGWILSIPETSQNKELAWELLTIMLEPEVLIPMLLQQGYLPTQKSIGEGPYSEKL
                     KLTIPYYEELVSLISLGKGRPNIPEYPIIAEHIRNAIEQVYNGMDPKTALDEAAKQSE
                     KALGW"
     gene            2791..3855
                     /locus_tag="VLA74_09760"
     CDS             2791..3855
                     /locus_tag="VLA74_09760"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSF51031.1"
                     /translation="MVDAVTKFSVEIDSGKFLVLLGPSGCGKTTIIKCIAGLIDPTEG
                     QIYIDDILINKLPPKQRDVAMVFQSYALYPHMTVYDNIAFPLKMKKVPKDAIKNQVEN
                     IASLLDLAPFLKRKPKELSGGQMQRVALARALVRKPKLFLMDEPLSNLDAKLRMQMRT
                     EIKKLQKKIGITTIYITHDQIEAMSMADQIIVMDKGLIQQIGSPEEIYYKPQNLFVAN
                     FIGSPPMNLLNFNISKNSQDFCLKSDPIEIPVSKIFLPFLGNKSSKIILGIRPKDFVI
                     VDKSQKNETDTISFIGKLLFTELLGDEVIHEFKLENNSVLKVSSNTYNFHYQQNDVFN
                     LVVKYKNVHFFDSQTEKRLF"
BASE COUNT         1474 a          584 c          586 g         1434 t
ORIGIN      
        1 aactattaaa caggctattg actatatgag gttctgtaat tacaaataga taattttcaa
       61 cagtaggatt gttaggaata aattgtggag gtatggatgt tgcttcttca ttggatttga
      121 gtgatgttga aagaacccaa atgagtggta ctatagtaat aaagagataa gtaaatagca
      181 atatgtatat aactgatttt tcagcataga accatttaga atatgtaaat aaggaaagat
      241 aattttttat cattatctat ttaactttta ttattattat atattatttc ttatttcttc
      301 catcaaatag tctaatatat actaatgcaa ctgatatatt cataataata agtaatatgc
      361 caactgctgc tccttctgag aaatacccaa attcaaaagc ttgtttatac atgtataaag
      421 acattgttgt tgttgaaaac aatggacctc cattggtcat aatcaattgc aaatcaaaaa
      481 aattaattgt ccaaactgtt actaaaatta aatttgttaa aataaatggt tttaaaagtg
      541 gaagagttat ataaataaat cttcgaaatt ttgttgctcc atcaataata gctgcttcat
      601 aaagtgtagg attaattgaa agtaatcctg cggtaagaaa taatattgtg aaaggtgttc
      661 cataccatgt atttgctata ataattgtcc atatggctaa tgcaggatca gaaaaccatt
      721 gaatagaatc taaccccaat ttttcaattc cataattaat aataccaaaa ttatcatcaa
      781 agagaaactt aaatgaaaaa cctgtaataa ctgtggatac agtccatgga ataataaata
      841 gtgttcgaaa aagtcctgaa gctctaattt gttgatttaa caaaagagct attaagagac
      901 caatcccaaa ctgaagaagg actgtcccta atacaaaaac taatgtaact ttgagtgaat
      961 taaaaaaatt aggatctgca aaaatattat taaagttttt aaatccgaca aattcccatt
     1021 cttttattat tgtaagaata gatacgtcat gtaatgagat atatatgttc cataataaag
     1081 gaaaaaaaag aaatagaaat aatattatta taccaggtaa taaaaaaaga taaggttcaa
     1141 aattttttaa gattaacatt gaattgctta agcaataaat tggattgcag agtaaaatta
     1201 gatccgatta gttaccagcc tagggctttt tctgattgtt ttgcagcttc atctaatgca
     1261 gttttaggat ccattccatt gtatacttgt tcaattgcat ttcttatatg ctcggcaata
     1321 ataggatact caggaatatt tggtcttcct tttcctaatg agattaagga aactagctct
     1381 tcataatagg gaattgttaa tttcagcttc tctgagtaag gaccttctcc tatacttttt
     1441 tgtgtaggga gatatccttg ttgtaataac atgggaatca aaacttcagg ttctagcatt
     1501 atagtaagaa gctcccatgc taattcctta ttttgtgatg tctcaggtat acttaagatc
     1561 cacccaccca ttagagtaga ggtatttgtt gaatttgaac cacttggaac aggaaacatc
     1621 ggaatcattc ctattttttc atctaaggta ttccattcga tttttggaaa ttgtcctaat
     1681 atccatgacc cttcaagcat tacagcaaat tttttgtccg caaattcttg accccagaaa
     1741 tgattaattt gaggcctaat tccagcatca acttgatctt ttaagaattg aagagctttt
     1801 acacctaact cattgttata gataggaaac caataattgc tttttgttgg atgtccatct
     1861 cttttttcaa gtatttctcc acctagcatc catagatatg gataccacat atcaggtgaa
     1921 tggttggcgc ctactaaatg catagcttga attccgtctt tgtctaaaat ttcatttagt
     1981 tttttagatg atgatatgta tccattccaa ttctttaact gatctggatt tatccctact
     2041 ttatccaaaa gatccttcca ataccataat cctctaacat ctgtccatgc ccaaatgcct
     2101 ttgacttgat cattgtataa tcctccctcc caattttgac tataccaatc agatgacttg
     2161 ttccattttt tcgtattaga tgtaagatct gacaaaaatc caccttctgc aaattcaccc
     2221 aaccatatct gatctattga aacaagatca attggagttt tacctgccat tgcagtaagg
     2281 atttgagttc gtgtatcgga atatggtaac actctaaaat ctattttaat ctttttatct
     2341 ggatgtcttt catttagtat ctttgttgca ttctctaaaa gtatttccca tctttcctta
     2401 ggttcagcaa atatggcatt aagagttatt tcttcttgag caataatagg tataaaattt
     2461 attattgaaa taaacagcaa agataacatt acaaaagata ctattattaa aaattttgac
     2521 gtgggcaatt tagatttata aaagaattca ttattactgc tgctattatt attaatcatt
     2581 attttgtaat aaatgtaata ttttttaaag gttatctaag tgtattgtat ctgttattct
     2641 aaatcagttg ttgtcattat atatgccctt tatattatgt aattatttta ttttatattt
     2701 gcaaaatata ttaaatatta cttttttagt agatttagtg agtatttcct gtcaagaata
     2761 acaattaaaa atttaagtaa aagttatggg attgttgatg ctgtaacgaa attttctgta
     2821 gaaattgatt caggaaaatt tttagtctta ttaggacctt ctggatgcgg aaaaactact
     2881 ataataaagt gtatagcagg gcttattgac cctacagaag gacaaattta cattgatgac
     2941 attttaataa ataagcttcc accaaaacaa cgtgatgtag caatggtatt tcaaagttat
     3001 gcattatatc cacatatgac cgtatacgat aacattgcct ttcctttaaa aatgaaaaaa
     3061 gtaccaaaag atgctataaa aaatcaagta gaaaacatcg ccagtttatt agaccttgct
     3121 ccatttctaa aacgaaagcc taaagaattg agtggcggtc aaatgcaaag agtggcttta
     3181 gctagagcac ttgttaggaa acccaaatta tttttgatgg atgaaccttt gagtaatttg
     3241 gatgctaaat tacgtatgca aatgagaaca gaaataaaaa aattacaaaa gaaaatagga
     3301 attacgacga tctatataac tcatgatcaa attgaagcta tgagtatggc cgatcaaatc
     3361 attgttatgg ataaaggatt aattcaacaa ataggttcac ctgaagagat ttattataaa
     3421 ccacagaatc tctttgttgc aaattttata ggaagtccac ctatgaatct cttaaatttt
     3481 aatatatcta aaaactctca ggatttttgc ctcaagtctg atccaattga aattccagtt
     3541 tcaaaaatat ttttaccatt tttaggaaat aaatcttcta aaattatttt aggtataaga
     3601 cctaaagatt ttgtaattgt tgataaaagt caaaagaatg aaactgatac aatatctttt
     3661 ataggaaaat tattattcac agaattactg ggagatgaag tcatccatga atttaaatta
     3721 gaaaataata gtgtactaaa agtttcatca aatacatata attttcacta tcaacaaaat
     3781 gatgtattta atttggtagt aaaatataaa aatgtacatt tctttgattc tcaaacggaa
     3841 aaacgtttat tttgattcaa tatttatata aataatatta tataaaagtc aaattactaa
     3901 aataaaaaaa attgaaacgt caattactac tagcatgtct actatcttat aattttagta
     3961 tttaaatata atagaatatt gcatatgtca ggaacataag gaatacttta tacaaatgaa
     4021 gattgtaatt tatgttaagg aataaatcta tatttatgta atctttaacc tttaatat
//
LOCUS       DATIAS010000488        10786 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1314342, whole genome shotgun sequence.
ACCESSION   DATIAS010000488 DATIAS010000000
VERSION     DATIAS010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 10786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10786
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1314342"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VLA74_09765"
     CDS             <1..231
                     /locus_tag="VLA74_09765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51032.1"
                     /translation="IDFIKRIDSRYDSKIKTIFVILDNASIHRSKKTINTITRYYPRI
                     VLVISSYPITTSKFNRNKMVMDAETGNKQFYI"
     gene            197..346
                     /locus_tag="VLA74_09770"
     CDS             197..346
                     /locus_tag="VLA74_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51033.1"
                     /translation="MQRQAINNSTFRNESEIGKAVFDWTCNYNEKHGRRITDVLQIGV
                     MSMTT"
     gene            complement(1072..2964)
                     /locus_tag="VLA74_09775"
     CDS             complement(1072..2964)
                     /locus_tag="VLA74_09775"
                     /inference="COORDINATES: protein motif:HMM:NF014600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HSF51034.1"
                     /translation="MNNRESFEIEMSNLLRESFDFQRAAEKNRQYSTRLGWNKYLTRI
                     NKLLGFTNVSPSENSFARAVYDWQYSNGLKPDGIIGPNSWLKMKKSLENLSFTTNSSS
                     GDNSNSIVISGSEIKFPKGFSPEDLKPEKTPEMTEFKRLVYKISFSRNCCRKDKKTGN
                     LIIKTSFSLRMPDEALGPTTGNIRTRLIKEAAVWCVKLLDAARKQIQREGKVGNITID
                     AASGYRDASDQFSKWDQRFSMYYNRAVAKKEIVPGLYDLKNANALSYHIGRGTATPGF
                     SDHNRGVAMDFITTQNGELYTTKKEEPNLTLWKDSWFYQWLQRNAALYRFYPRPSINE
                     PWHWVYRPESSVSREVSLLPSCRESVGQTYYLKNINLTVDKKNLTYIDKHRSTGIYVP
                     SSFICSTKANIIVYLHGYKFGYPGENSTIHDYWDKKQFPLFAFREELLKSQKNAILVA
                     PTLGSKSQAGRLIDAQDGGLDWYLGYVLELLQKQGIAKEIGEVVLACHSGGGSPMLRL
                     ATINSNKFMLRECWGFDSLYSGYDEKKNKRYTQPDRWLYWAKKNPDKKLFIYYYTSTE
                     KEAVYLEKNKNIRKVHNIYVKKLDTKYAKEKIKDKMIGKKYEKAPHFWVPITYWKDRL
                     SELSWT"
     gene            complement(2979..4460)
                     /locus_tag="VLA74_09780"
     CDS             complement(2979..4460)
                     /locus_tag="VLA74_09780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51035.1"
                     /translation="MSNTGPNYDIDQLQRALEKKVIERLIKYTTNRTDYRPVIMPECG
                     NFFLSQIDKDNYESNSPPILEIFDEYFARYITMPSEFPRYKKFAHRFYWGLTNPEEKL
                     AKFLLNSCSDDIEFDPEESREKPHLPEGEFYPDHTTVNKDPYKDTQLNITDEQVAELN
                     CCIPCGCMFLWGNRRLKSFLYEAVDNGSQNPIPANYNIDTDNRLNKLFVGDTMWLYFF
                     ERMGIFKIIGGILDDYANNGKYPIPSNDFTSLIIEMMIREIKKGTASTIKDRAYTYAR
                     TLGWKLTTQVTEIDRDKVMVNNGFTKLFHKFITSALYFYKEKRLAEAIKGVQVTPPST
                     ATVITIQDTISLLKNSLESFRQGRNYYNTLNGIIWVIAGLDLIYRTRDNFGIPLSYQS
                     LEQLIPAAYNIIVEKKSINSADPNRYKLHYECAQDARDVLIDIDALPYQEPQAVFSFS
                     NFDQLRLWLNIIEPRIEGYRGAYMALTGIDLAKEGYLNIEQEI"
     gene            4658..5590
                     /locus_tag="VLA74_09785"
     CDS             4658..5590
                     /locus_tag="VLA74_09785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51036.1"
                     /translation="MSDLEEQYETEMEDYNKSAPDMEEEEEAELEMEDYNELPADTEE
                     KDLEEEFQELELEMEGENEPESETISDLEIPFADQLYELSQESFESSSELDDRVNEIM
                     DKMERQYFFGKALRKLKKKALGKVFSIAKKYAKNLPAFKGIGAITQLARGDLKGALGS
                     AAKVALSSAIPGGSIGLQVLDSLGGGSGSSATSEYASQDTEFPDSSEIDLEKWKNFVT
                     VSELAFENLFDNFNESAVTDPVAANKLANQALQNAVSQTAAKTQVGQTGTGISKTTPY
                     YRRAQTRTVGYTKRRKYKLRVRKGDNIVLRIKGL"
     gene            5662..6885
                     /locus_tag="VLA74_09790"
     CDS             5662..6885
                     /locus_tag="VLA74_09790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51037.1"
                     /translation="MSSLRRLVDLSEKENITQNQWRSIESRLAIAQETLLSNLENAGR
                     KYLHQINNPEQARKMNKILGELDLKLTKVIIFFDTYFDILSQRKVSSLNEILAGCDVI
                     AADAVKNKHRLLDLMEDPIVFFDRGFGASIIREGASFPTKIKNPVPLLQIPYSRFISK
                     YDLSSILHEAGHLVMARLGLNVMLPRLFRNVLATTDAPVDIINLYSRWTTEIGPDFWG
                     FCNCGQAQTSSVKEILSLPPQNVFKISFGDPHPPPYIRVLLSIDWCRYQWGNGEWENW
                     QQEWFNFYPIKMAPRETARILEICRKFIPIITKTLFNTRFKFLDGKKLPDLFEMSAIS
                     PENIKQIANSIKSGKLNLKGHKPCIQLAVFRWIRDHTNFNEDIIDKLMSDWLIRLGRS
                     RRELTIPIIDLEERK"
     gene            complement(7335..8216)
                     /locus_tag="VLA74_09795"
     CDS             complement(7335..8216)
                     /locus_tag="VLA74_09795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSF51038.1"
                     /translation="MKLIYSSDIPGMLENVSISQIKLPEFYYREKELDEEIENLKFSM
                     KQYGLLNPIIVRNIGNYFEVVTGVRRYKASKLLGWRKILCHVIDVPDKEAYEISLMSN
                     LQHKQLGPIEEALAFKKYLYNYKWGQITELAYKIGKSHSYIHRRLKLLECSQEIIDAL
                     TQRRIEPSIAEEIVSIKHQDVKTNLITLALENKITCQQIRKIKDALNTTEIINPLYMF
                     KQDDFEANQNIRELDEKNQKLFNKMIILLKNTLRTMSPIIEDAEDDWIVHNIFMQHKN
                     MIDKQIDILIKEKKKIN"
     gene            8773..8976
                     /locus_tag="VLA74_09800"
     CDS             8773..8976
                     /locus_tag="VLA74_09800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51039.1"
                     /translation="MTFEQRVTTMFAPNVYGNADKKMGILRSIVGGSRVENGIENGRR
                     GKNPHTYDWKSRNCKNIIGSRID"
     gene            8924..9754
                     /locus_tag="VLA74_09805"
     CDS             8924..9754
                     /locus_tag="VLA74_09805"
                     /inference="COORDINATES: protein motif:HMM:NF012704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51040.1"
                     /translation="MIGNPGTAKTSLGVESTKLNQNSRIVDASGASGKSLVGIVDKEN
                     DSLMVKYGVVVAAKNSHVVINEAGSMSYDDQWHFVGIAEEGITTLDKYGEHIPIDAPT
                     ILIFTANPIGTKWKSNKMTKEELTVIKPNLLDRLDQKYGFFDNQTEEEMEDFIDKITK
                     IKNRKPHNYNFLIKYLQYVKTIEPKWVGNAERRLNRFWINIRSQGIEHNRSFFSIKRI
                     AEAQTKLNLSDEVDDIIASKTMQSLQLMFMQYGKIIEQIQNPRDLTVEVFYNILKVIQ
                     "
     gene            9871..10137
                     /locus_tag="VLA74_09810"
     CDS             9871..10137
                     /locus_tag="VLA74_09810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51041.1"
                     /translation="MLEQKQGVKITSLRPRVLVYSSPTITKTDKDYPSSPVISDLSDL
                     SEQLPDDSFKKKLKIFIKIYKLNGQIGQIGQIAKKKSLLQMSSW"
     gene            10266..>10786
                     /locus_tag="VLA74_09815"
     CDS             10266..>10786
                     /locus_tag="VLA74_09815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51042.1"
                     /translation="MASIEDCIDTTNKKKKEIETGLDFILSHLEKPTIFPRTIMTKKL
                     GYQKIVYSKERALEYFIDSDFIDCRINAFPSLKEGATWPPNLLFIDLDRNDFKTEKGF
                     ELALYNILKNIKEKLGNNDARPTVLFTGGGYHIYQPVYCPTALENIKEFQKFDKPSQE
                     FLRFAKNNLSNGKA"
BASE COUNT         3798 a         1666 c         1734 g         3588 t
ORIGIN      
        1 atagatttta taaaaagaat tgattctaga tatgattcca agatcaaaac aatattcgtt
       61 attctggata atgcatccat acataggtca aaaaagacaa taaacacaat tacacgctac
      121 tatccaagaa tagttcttgt aatttcttcc tacccgatca ccacatctaa atttaataga
      181 aataagatgg ttatggatgc agagacaggc aataaacaat tctacattta gaaatgaatc
      241 tgaaattgga aaagcagtat ttgattggac ttgtaactac aatgagaaac atggtagaag
      301 gataactgat gttttacaga taggagtaat gagtatgact acataactgt taacttaaca
      361 gagcctccca actagttcaa ttatattaat gatgaatatt tttatctttt aagatcaata
      421 tattttatga tttgtgattt catggtgtta gatctcaaat tagccaagtt tatcctatct
      481 tctcacaatt atcaaaaaca tgaaatcaga aataaacggt atccggacag atagtggttt
      541 tggatattaa catataaatt aagaaatatt tcataaatca tgaaagaaat ttaatatcaa
      601 aaattttttt gtattaataa tttataatta taaagttttg acatcgaaaa atatattgct
      661 tatgaattcc accatactgc attctccaaa taacaagttc cagtatctgt agaattaaat
      721 ttttacgata attgagctta gtttataaat cttttctaag aattgtaaat atgcaagtat
      781 aatagatctg tttctatcta aatccataaa cataaaaccc tgtttaaaaa atagatatgg
      841 ttgcagattg gtgattattt catgttatta tcgatgtggt aacaataaag cattctaaaa
      901 atataggtta ttcattttaa attaaaaaaa actctattgg aatactacgt gggatgaaca
      961 ttattgatat cataaagaca cttaatgaat agacctctaa gaaaatcaaa attactatac
     1021 agatattaaa taatttattc atatcctaac aataaagatt tgtttatttt atcaagtcca
     1081 agacaattct gaaagtctat ctttccagta tgtgatagga acccaaaaat gtggagcttt
     1141 ctcatatttt ttgcctatca ttttatcttt aattttttct tttgcatact ttgtgtctaa
     1201 ttttttcaca tatatattat gaactttgcg gatattttta tttttctcca gatatactgc
     1261 ttctttttct gtagatgtat agtaataaat aaacagtttt ttatcaggat ttttcttggc
     1321 ccaatataac catctgtcag gttgggtgta acgcttgttc ttcttttcgt cgtagccgct
     1381 ataaagggaa tcaaatcccc aacactccct gagcataaat ttgttagagt ttatggtagc
     1441 caatcttaac attggagatc ctccgcccga atgacatgcc aaaactacct caccaatttc
     1501 tttagctatg ccttgttttt gtagaagttc caaaacatat cctagatacc agtcaagacc
     1561 accatcttga gcatctataa gtcttccggc ctgtgatttt gaccctagtg taggagctac
     1621 taggattgca tttttttgac tttttaataa ttcttcccta aaagcaaaaa gaggaaattg
     1681 ttttttatcc caataatcgt gaattgtgct attttcacct ggataaccga atttatatcc
     1741 atgtaaatag acaataatgt tagctttagt gctgcaaata aatgatgaag gtacatagat
     1801 tccagtacta cgatgtttgt caatatacgt taggtttttt ttatcaactg ttaaatttat
     1861 attttttaaa taatatgttt gtcctactga ttctctacat gatggtaata aggaaacctc
     1921 tctactcacg ctagactctg gtctatacac ccaatgccaa ggttcgttaa tagatggtct
     1981 tggataaaat ctataaagtg ctgcattcct ttgaagccat tgatagaacc aagagtcttt
     2041 ccatagtgtt agattaggct cttctttttt agtcgtatac agttctccat tctgagtagt
     2101 tataaaatcc atggctacac ctctattgtg atcactaaag cctggtgttg ctgtccctct
     2161 cccaatatga taagataaag cattagcatt tttaagatca tataaaccag gaacgatttc
     2221 tttttttgct actgctctat tgtaatacat agaaaaacgc tgatcccatt tagaaaattg
     2281 atctgaagca tcacggtatc cactagctgc atcaatagtt atattcccca ctttaccttc
     2341 cctctgaatc tgttttctgg cagcatccag aagctttaca caccatacag ccgcttcttt
     2401 tattaatctt gtacgtatat tacccgtagt aggtcccaaa gcttcatcag gcatacgaag
     2461 agaaaatgag gttttaatta ttaagttgcc agttttctta tcttttctac agcagttcct
     2521 tgaaaaacta attttataaa ctaatctctt aaactctgtc atctcggggg ttttctctgg
     2581 tttaagatct tctggagaaa atcctttagg aaactttatc tcactacctg atataacaat
     2641 agaatttgaa ttatcaccag aactagaatt tgtagtaaaa cttaaatttt ctagactctt
     2701 tttcattttt aaccaagaat ttggaccaat aatgccatct ggcttgagtc cattgctata
     2761 ttgccaatcg tacactgccc tggcaaaaga gttctcggat ggagaaacat ttgtgaaacc
     2821 taataattta ttaatcctag tcaaatattt attccatcct aatcttgtag aatattgtct
     2881 atttttttct gcagctcttt gaaaatcaaa agattccctg aggagatttg acatctctat
     2941 ttcaaagctt tctctattgt tcatactaat gacctaggtt atatttcttg ttctatgttc
     3001 aaataacctt ctttagccaa gtctattcct gttaatgcca tatatgcacc tctgtaacct
     3061 tctatccttg gttcaattat gttgagccat aaacgtagtt gatcaaaatt tgaaaaagaa
     3121 aaaactgctt gtggttcttg atatggaagt gcatcaatat caatcaacac atctctagca
     3181 tcttgtgcac attcatagtg taacttgtat ctatttgggt cagctgaatt tatcgacttt
     3241 ttttcaacta tgatattata tgccgcagga ataagctgtt caagtgattg gtaacttaat
     3301 ggtataccaa aattatctct tgttctataa attaaatcaa gccctgctat tacccagatt
     3361 ataccattta gtgtattata ataatttctg ccttgcctaa aagattctag ggaatttttg
     3421 agtaaagata ttgtatcctg aattgtgatt actgtagcgg tagaaggagg agtgacttga
     3481 actcctttta tagcttctgc aagccttttt tctttataga agtataacgc tgatgttatg
     3541 aacttgtgga atagtttagt aaacccatta tttaccataa ctttgtcccg atcaatttca
     3601 gtaacttgtg tagtaagttt ccaacctaaa gttcttgcat atgtatatgc tctatctttg
     3661 atagttgaag cagtcccttt ctttatctct ctaatcatca tttctattat cagagacgta
     3721 aaatcgttac ttggtattgg atattttcca ttatttgcat aatcatctaa aatgccaccg
     3781 ataattttga atattcccat tctttcgaaa aaataaagcc acatagtatc cccaacgaat
     3841 aacttattta gacgattatc agtatctatg ttataattag ctggtattgg attttgagat
     3901 ccattgtcca ccgcctcata aagaaaagat ttaagtcttc tatttcccca taaaaacata
     3961 catccacaag gaatacagca gttcagctca gcgacttgct catcagtaat atttaattgt
     4021 gtgtctttat aaggatcttt attaacagta gtatgatctg gataaaattc gccttctgga
     4081 agatgaggtt tttctcttga ttcttcggga tcaaattcga tatcatcact acatgaattt
     4141 aaaagaaatt ttgcaagttt ctcctcggga tttgtcaacc cccaataaaa cctatgagca
     4201 aattttttat acctagggaa ttctgatggc attgtaatat acctagcaaa atattcatca
     4261 aatatttcta ggatcggtgg ggagttagat tcataattat ctttatcaat ttgggaaaga
     4321 aaaaagttac cacattcagg cattatcacc ggacgataat ccgtacgatt tgtagtgtat
     4381 tttatgagcc gttcaattac ttttttttct agagcccttt gcagttgatc aatatcataa
     4441 ttaggtcccg tatttgacat taagttagta aagaaataga attataaaaa tactttgcat
     4501 ttttgtattt ttttatagtc aatttattat cctaattata agagaattat gtaaggagaa
     4561 agaaacatat tcattataat atttaactag ttagatatag tcaaaacaat cctagaaaac
     4621 aaaatactta tctattatat catatgtact acaggaaatg tctgatctcg aggagcaata
     4681 tgagactgaa atggaggact ataacaaatc agcacctgac atggaggagg aagaggaggc
     4741 agaattagaa atggaagatt ataatgaatt acctgctgac acggaggaaa aggatctgga
     4801 ggaggagttt caagagcttg aattagaaat ggagggagag aatgaaccag aatcagaaac
     4861 gatatccgat ttagaaattc cgtttgccga ccagctatat gaattatctc aagagtcttt
     4921 tgaatcatct agtgaattag atgatagagt gaacgaaatt atggataaaa tggaaagaca
     4981 gtactttttc gggaaagctt taagaaagct gaagaaaaag gcattaggca aagtattttc
     5041 tatagcaaaa aaatacgcca agaacctccc agcatttaaa gggataggag ccattactca
     5101 gcttgctaga ggtgacttga agggagcttt aggatcggca gctaaggtgg cattatctag
     5161 tgctatccct ggtggttcaa ttggccttca ggtattggat tccctgggtg gtggttcagg
     5221 atcgagtgca acatctgaat atgctagcca ggatacagag tttcctgata gttcagaaat
     5281 tgatttggag aaatggaaga attttgtgac tgtttcagag cttgcttttg agaatctttt
     5341 tgataacttt aatgagagtg ctgtaacaga tccagtagcc gcaaataagt tggcaaacca
     5401 agcattacag aacgcagtat cgcaaactgc agcaaaaact caagtaggtc aaacaggaac
     5461 aggaatatcc aaaactacac catattatag acgagcgcaa actagaacag taggttatac
     5521 aaagagaagg aagtataaat tacgtgtaag aaaaggagac aatattgtat taaggattaa
     5581 aggtttatag tttgcttggt catcattcat tatacttctc tttttaagcg atatgagacg
     5641 actaagaaga gaattcttgt tttgtcttca ctgaggagac tggttgatct ctctgaaaag
     5701 gaaaatataa cccaaaatca atggagatct atcgaatcaa gattagctat tgcacaagag
     5761 acattacttt ctaatttaga gaatgctgga agaaaatatc tccatcaaat taataatccg
     5821 gaacaagctc gcaaaatgaa taaaattcta ggagaacttg acctcaagct aacaaaggta
     5881 atcatttttt ttgatacata ttttgacatc ttatctcaaa gaaaagttag ttcattaaat
     5941 gaaatacttg caggatgtga tgtcattgct gcagatgcag taaaaaataa acacaggcta
     6001 ttagatctaa tggaggatcc tatagtattt tttgatagag gatttggggc atcaataata
     6061 agagaagggg cttcttttcc taccaaaatt aaaaatcctg ttccattatt acaaatacca
     6121 tattcaagat ttatatcaaa atatgatctc tcatcaatac tacatgaagc aggccatttg
     6181 gtaatggcac gacttggtct taacgttatg ctgccacggc tatttagaaa tgttttggcg
     6241 acgacggatg caccagtgga tataatcaat ttatacagtc gatggactac agaaatcggt
     6301 cctgattttt ggggtttttg taactgtggt caagcccaga catccagtgt aaaagagatt
     6361 ttatctttac ctcctcagaa cgtatttaaa atttcgtttg gagatccgca tcctcctccg
     6421 tacatcagag tattgttgtc tatagattgg tgcagatatc aatggggaaa tggagaatgg
     6481 gaaaattggc aacaagaatg gttcaatttt tatcctatta agatggcacc aagagaaaca
     6541 gcaaggatcc tagaaatttg tagaaaattt atacccataa ttacaaaaac tctctttaat
     6601 acaagattta agtttttgga cggaaaaaaa cttcctgacc tatttgaaat gtccgcaatt
     6661 tctccggaaa atatcaagca aattgccaat agcataaaat caggaaaatt gaatttgaaa
     6721 ggacacaaac cttgtattca gctagcggta tttaggtgga tccgtgatca cacaaatttc
     6781 aatgaagata taatagacaa gctcatgtca gattggttaa taagattagg aagatcacgt
     6841 agagaattaa caataccgat tattgatctc gaagagagaa aataattttt tcaacagtaa
     6901 aaattgattg attagaaaaa tctattttct atctgaaaat gtttctccaa atatgataca
     6961 acataatctt tcgatattat tgtaataaaa tttattaaaa ataaaattat tatttcagac
     7021 caagagaggc gttatggaaa tactatttaa ggaaaatgaa tataaaatct tggtaataaa
     7081 tcccatagat tgaatatgtt gaaagttcaa actaaaatgt cttggtagta tcaatttgac
     7141 taagatcatt acttgctatg ttattatcat ttatatatat tagggtgaat tatatcgatt
     7201 tttttttact tttctaaaat atagtaatac aagtatatta tacgattcag ttgaacaacc
     7261 attatttata tctcgatatt tgtttggtac cgaccaattt gtatattttc tttatctttt
     7321 tagaaatatt gaatctagtt tatttttttc ttctctttta ttaatatatc aatttgctta
     7381 tcaatcatat ttttatgttg cataaatata ttgtgaacta tccaatcatc ttcagcatct
     7441 tctataattg gcgacatagt tctaagagta ttttttaaaa gtattatcat cttattaaat
     7501 aatttctgat ttttttcatc taattctcta atattttgat tagcttcaaa atcatcttgt
     7561 ttaaacatat aaagaggatt aataatttct gtggtattca aagcatcttt tattttacga
     7621 atttgctggc aggtaatttt attctccaat gcaagagtaa ttaaatttgt tttaacgtct
     7681 tgatgtttga tagatacaat ctcttcagct atacttggtt caattcttct ttgagtaagt
     7741 gcatcaatta tttcttgtga gcattctaat aactttaatc ttctatgaat atagctgtga
     7801 cttttaccta ttttatatgc taattctgtt atttgtcccc atttatagtt atataaatat
     7861 tttttaaatg ccaatgcttc ttcaattgga cctaattgct tgtgttgcag attggacatt
     7921 aaagatattt cataagcttc tttatctggt acatcaataa cgtgacaaag aatttttctc
     7981 catcctaata gtttacttgc tttatatctt ctaacaccag taactacttc aaaataattt
     8041 cctatatttc taactataat tggatttagg agaccatact gtttcataga aaattttaga
     8101 ttttcgattt cttcatccaa ttctttttct ctataataaa attcgggtag tttaatctgt
     8161 gaaattgaga cattttctaa cattccagga atatcagacg aataaattaa tttcacgttt
     8221 ttgaatttaa tttgatagta tttaatgtta tttatataga aaaaccaaat tttataaaag
     8281 aattaaatta ttaacatatt ttttggattt taaaacttag attttgctta aacaatcacc
     8341 ataatgttga actacggcat tatgcggctg ttcgttaaat gagttacacg taaccattaa
     8401 ttacttggtt taatgattca tacatattat agatacacat cttttagatg tttattttcc
     8461 tataaaagcc aagaatgttg ggatggaatt aaataaattc aattcattta atcacagtga
     8521 aaacaactct attaaaaact atctaactat agataatgca gtgattttaa ttatacaaat
     8581 atcctgcatt ccgacaaacc gattgtttac aagaacaaaa aagaaatcaa gattactgaa
     8641 aaagacatag agaactttta caactggaaa acaatttgtc atatcgccta taaaaaagaa
     8701 ttagaagtac taaacaaata cagccatctt aaagaagaag atagaccaga ttgggttaag
     8761 aaaatcaaac ccatgacatt cgaacaacga gttacaacta tgtttgctcc caatgtatat
     8821 gggaatgcag ataaaaaaat gggaatactt cgatcaattg ttggcggaag tagagtagaa
     8881 aatggaatag aaaatggacg tagggggaag aatccacaca cttatgattg gaaatccagg
     8941 aactgcaaaa acatcattgg gagtagaatc gactaaattg aatcaaaatt ccagaatagt
     9001 tgatgcatca ggagcatcag gaaaaagttt agttggaata gtagacaaag aaaacgatag
     9061 tttaatggtc aaatatggtg ttgttgtagc ggctaaaaat tcccatgttg taataaatga
     9121 agcaggatct atgtcatatg atgatcaatg gcactttgtt ggaatagcag aagaaggaat
     9181 aaccacgtta gataaatatg gagaacatat tccaatagat gctcctacaa tcctgatatt
     9241 cacagcaaat cctataggaa caaaatggaa atccaataaa atgactaaag aagagttgac
     9301 tgttatcaaa cctaatctat tagatagact tgaccagaaa tatggttttt ttgataacca
     9361 gacggaagaa gaaatggaag actttataga taaaatcaca aaaataaaaa atagaaaacc
     9421 tcacaattat aatttcctta taaaatatct tcaatatgta aaaacgattg aacctaaatg
     9481 ggtaggaaat gcagaaagga gattaaatag attttggata aatataagat ctcaaggtat
     9541 agaacataat agatccttct tttctattaa gagaattgcg gaagcgcaaa ccaaactaaa
     9601 tctttcagat gaagttgatg atattattgc aagcaaaact atgcaatcac ttcagttgat
     9661 gtttatgcag tatggaaaga taattgaaca aattcaaaat cctagagatt taacagttga
     9721 agtgttttac aatattctca aagtaataca ataggttata cagttggaga actttgccaa
     9781 aaaggttcag agaaaagtaa gcaggttaaa gagtatctga agcagaggtg ggattttgag
     9841 cataataaag aattaagaac tataatagag atgttagaac agaaacaagg cgtaaaaatt
     9901 acaagtctaa gacctagagt tttagtatat tcctcgccta ccattacaaa aactgacaaa
     9961 gattatccat catcccctgt catatctgac ctttctgacc tttctgagca acttccagat
    10021 gattcattta aaaaaaaatt gaaaattttc ataaagatat acaaattgaa cggacagata
    10081 ggtcagatag gtcagatagc aaagaagaag agtctattac agatgtcaag ttggtgaaca
    10141 tatctgttag taaaaaaggt aaacctatag agatgacaaa agaacaatac gattcatggg
    10201 ttggaaacga aaatgagaac gagatataat aatgacaata tatacagcaa caaatagtag
    10261 taacgttggc ttcaattgag gactgcattg atacaacaaa taaaaaaaag aaggagatag
    10321 aaacaggcct agactttatt ttatctcatt tagaaaagcc aacaatattt ccaagaacta
    10381 taatgaccaa gaaattagga taccagaaaa tagtttactc aaaagaaaga gcattagaat
    10441 atttcataga ctctgacttt atagactgta gaatcaatgc atttccttca ctaaaagaag
    10501 gtgctacatg gccacctaat ctattattca tagacttaga tagaaatgat ttcaaaacag
    10561 aaaaaggttt tgaacttgct ttatataata ttttaaaaaa catcaaagag aaattaggaa
    10621 ataatgatgc acgacctact gtattattta caggaggagg atatcatatt tatcaacctg
    10681 tttattgccc aactgcttta gaaaatataa aagaatttca aaaatttgac aaaccatcac
    10741 aagaattttt gaggtttgca aaaaataatt tgtcaaatgg taaagc
//
LOCUS       DATIAS010000489         4045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_225863, whole genome shotgun sequence.
ACCESSION   DATIAS010000489 DATIAS010000000
VERSION     DATIAS010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4045
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225863"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..481
                     /locus_tag="VLA74_09820"
     CDS             305..481
                     /locus_tag="VLA74_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51043.1"
                     /translation="MLYSNSGIQIITLYECEEQLQMESISSRALAMILRLPNPSIGQF
                     RKPFEGFFPRSVQL"
     gene            942..1157
                     /locus_tag="VLA74_09825"
     CDS             942..1157
                     /locus_tag="VLA74_09825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51044.1"
                     /translation="MFNNIFTQKIVESVISFYTPLAEGFKSNRIDQLRYLKSRIRDNP
                     SEVEEWFDNEVDRIKNFKLHNLSSEFK"
     gene            complement(1467..2090)
                     /locus_tag="VLA74_09830"
     CDS             complement(1467..2090)
                     /locus_tag="VLA74_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51045.1"
                     /translation="MECKKLLRNRSSSSVYKSGKFDSHLSNREIGKTIASDKFTNTLD
                     DFWFMINPNAIINPFDFVSVENIYKTKAIGIVKHLQSSFIRSNYNDFEKEQKDKEQQN
                     KYPFVINSSLGSKAAVFARVSIMANTIAEVKNRKIAINFPLEAGKPVKYAKKDEIILA
                     LGIPKMNNPISIGIINSTDALQVPISLDISYVAGPNNAHVNASGIWK"
     gene            2409..3239
                     /locus_tag="VLA74_09835"
     CDS             2409..3239
                     /locus_tag="VLA74_09835"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HSF51046.1"
                     /translation="MASRNLWRGSISFGLVNIPVQVFVATQNEYSSFNQLDEKGHRIR
                     YKKWCPVEEREVPWSEIKKGYEISKDNYVILEKEDLEKIRLKTTHTIDINEFINSDDL
                     DPLYIEKNYYIGPDDGRNKKNKANSSQMTNKAYSLFVKILNETNKIAIGKVVLKDKEH
                     LVALRPYQRGLVMHQLKYLDEIRPMDEIPGISADKQPKVEERELSLGKTLVENLTNDQ
                     FDIGKYSDAYIRELEKLIATKSKGQKFKATKEEKLEETTDLVEALKASINVKQKSKSK
                     "
     gene            3682..>4045
                     /locus_tag="VLA74_09840"
     CDS             3682..>4045
                     /locus_tag="VLA74_09840"
                     /inference="COORDINATES: protein motif:HMM:TIGR02777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HSF51047.1"
                     /translation="MLEKYNEKRNFQKTSEPKGYQKKSEYNKASRFVVQKHNASRLHY
                     DFRLEDKLEGVLKSWAVPKEISLDPKIKRLAVLTEDHPLDYLHFEGLIPEGEYGAGSV
                     TVWDRGTFISESDISKQFK"
BASE COUNT         1501 a          561 c          654 g         1329 t
ORIGIN      
        1 cgtcactagc attgctagct accttcgaag ccagatcctt tatctgttgt gcagtacttt
       61 tgatttgttc cgtagtacta ttatctgatt gtgaataaat cgtaattgga cttgatatac
      121 aagtgacaat aactaaaaaa ataataaaaa tccttgatgg aatcatacaa ctatatatgt
      181 acgttatact ttttatactt tattagtaat gagtttaaaa aaagcgctcc catatttggt
      241 tcctttttac ccaatggtat aaaaataaac aaattgttaa ctgtagatta gttagctgaa
      301 taatatgcta tattcgaatt caggaataca aataattacc ttatatgagt gtgaagaaca
      361 gttacaaatg gaatcaatat cttcaagggc tttagccatg atattacgtt taccaaatcc
      421 ttcaattggt caattccgaa aaccatttga aggattcttc ccacgttctg tacaattgta
      481 atgtcataga aattatgctt taatagggtt tacaacttat agctaggtta tgcgtattct
      541 ttcatacaaa tattgaatta gatgttcgaa tattttagtt ttataagaac aacctggttt
      601 gtttaccatt tgtttctaat tcgactggaa tacaaaaaga cgtagtagtc aactaattat
      661 tttcctagaa ataggtatga atcattatat tctatgatgt gttaatataa ttatgatttg
      721 gaccataata tcaattgttg tcggaataat cgtcctagtt ttacttctaa gatttttgtt
      781 cggaataatc taactaaacc tgggaattat tttagacact ttgtttgaaa ttacagcaaa
      841 ttttatgtga ggttattaaa ggatgttgta cagataatat tatggctatt tatctcgtta
      901 gtaaaaaaca tagttcaaat gacagcaagg aggtccaata aatgttcaat aacatattta
      961 cccaaaaaat agtagaatct gttatttcat tttatactcc tcttgcagaa ggatttaaaa
     1021 gcaatagaat tgatcaatta cgatatttaa aatccagaat tagggataat ccttcagagg
     1081 tggaagaatg gttcgataac gaggtcgatc gtattaaaaa ttttaaattg cataatctat
     1141 caagtgaatt caaataattt gaaaacaatt attaacaaat tcaatggtaa aaagatacac
     1201 ttttaaaact ttttttggta ttactttagt acaaagtaat aatttaagtt caaattacaa
     1261 accaatcttt tttaggcata aataattaaa ggaagtaaaa tatttatcca attttatact
     1321 ctcgtgagtg aaatctaata taaaatactc aaagctaata ttaatatgga tgcttatatg
     1381 ttaaaaataa ttaccgaaat attgccatgt gtttttttag cgtttgatat gtcgaaaata
     1441 gaagaaaaag caggtaactt gtctttctat ttccaaattc ctgaggcatt tacatgcgcg
     1501 ttattaggac ctgcaacata ggatatatcc aatgagatgg gaacttgtaa tgcatctgta
     1561 ctgtttatta tccctatcga tatcggatta ttcattttag ggattcctaa ggcaagtatt
     1621 atttcatctt ttttagcata ttttacaggt ttacctgctt ccagtggaaa attgatggca
     1681 atttttctat ttttaacttc agctattgta tttgccatta ttgaaaccct tgcaaataca
     1741 gctgcttttg atccaaggct tgaattaata acaaaaggat acttattttg ttgttccttg
     1801 tctttctgtt ctttctcaaa atcattataa ttactcctta taaacgatga ttgtaagtgt
     1861 tttacaattc ctatggcctt ggttttataa atattttcta cagaaacaaa atcaaaagga
     1921 ttgatgattg cattagggtt aatcatgaac caaaaatcat ccagtgtatt agtaaattta
     1981 tccgaggcaa ttgtttttcc tatctctcta tttgagagat ggctatcgaa tttacctgat
     2041 ttgtaaactg aggaagaaga tctatttctc agtaattttt tgcattccaa tgtaatttaa
     2101 ccattaattt agataaccgt tacactgata attaataaat tcgtgaacaa aatttctagc
     2161 tagctgtttg atagttattc aaattagact atttcatgaa aatcagtcta tgagatatat
     2221 aaatcaaaat ataactatag aagtatatat ttagcaaatt tctgatatat tctacccttt
     2281 gatttaaaac aaaagcaaca aatgaatagg tcttcatatt taataatgaa taattgagat
     2341 gaatatcatt ttcaccacag gaacctgttt aatagccttt taaagtttgt agcttaaata
     2401 taattataat ggctagcaga aatctatgga gaggaagtat atcttttggg ctagtaaata
     2461 tacccgttca ggtttttgta gctacacaaa atgaatactc ctcttttaac caactagatg
     2521 aaaaggggca cagaattagg tacaagaaat ggtgtcctgt ggaggaaaga gaagttccgt
     2581 ggagcgaaat aaaaaaagga tatgaaattt caaaagataa ttatgtaatt ttggaaaagg
     2641 aagatttgga aaaaattaga ttaaaaacaa ctcatactat agatatcaat gaatttataa
     2701 actctgacga tttggatcca ctgtatatag aaaaaaatta ttacatcggt cctgacgatg
     2761 gaaggaataa gaagaacaag gcaaattcgt cacaaatgac caataaagca tattctttat
     2821 ttgttaaaat actaaatgaa accaataaaa ttgcgatagg caaggttgtc ttaaaagata
     2881 aggaacacct tgttgcttta agaccatatc agagaggtct tgttatgcat cagctaaagt
     2941 accttgatga aataaggcca atggatgaaa ttccgggcat ttctgctgat aaacaaccta
     3001 aagttgagga aagagaatta agtttaggaa agaccctagt cgaaaatctg acaaatgacc
     3061 agtttgacat aggtaaatat tccgatgcat atatcagaga attagaaaaa ttaatagcaa
     3121 caaaatcaaa gggacagaaa tttaaagcta cgaaagaaga aaaattagaa gaaactacgg
     3181 atctagttga ggctcttaaa gctagcatta atgtaaaaca gaaatcaaaa agcaaatgag
     3241 attaaacaag tgaaagaaaa gaataggcat atggcaaaat attaatacaa ttaatcgccg
     3301 gcaaaaaata atacatgtga tcataatgaa tccgacttgt aacacttaca ataatgttac
     3361 cttaacatgt aaccaatatc cttgacatat tgttcaaaac tatattttga ttgtaagaga
     3421 gataatatga aggaaataac caacgaaatc gtattgcgag atccaagata taatgaggaa
     3481 atacaagaga gacatcgatt aacagttagg gtcatctcga acgttaaaat atcttgtcaa
     3541 cgaattcaca atacgaccgc tcgcaatgcc gattataaga aattttatta ttatttattc
     3601 tattccttcc ttattgttgt tagttgttgt aatttgattg caatgttcgt tttcgtaagg
     3661 ttttacaggt gatgtaaaat aatactagaa aaatataatg aaaaaagaaa ttttcaaaaa
     3721 acatctgaac cgaagggata tcaaaaaaaa tctgaataca ataaagcttc tagatttgtg
     3781 gtacaaaaac acaacgctag tagattacat tatgatttta gacttgaaga taaattagaa
     3841 ggtgtattaa aatcttgggc agtaccaaaa gagatttcac tggacccaaa aataaaaaga
     3901 ctggcagttt taacagaaga ccatccactg gattatttgc attttgaagg cttgatccca
     3961 gaaggagaat atggggctgg atctgtaact gtttgggata ggggaacctt catatccgaa
     4021 tcggatatat cgaaacaatt caaaa
//
LOCUS       DATIAS010000490         2642 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1179323, whole genome shotgun sequence.
ACCESSION   DATIAS010000490 DATIAS010000000
VERSION     DATIAS010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179323"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(327..1382)
                     /locus_tag="VLA74_09845"
     CDS             complement(327..1382)
                     /locus_tag="VLA74_09845"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF51048.1"
                     /translation="MTISHFSLDDPINETFPHLTKRPISFTYLNSDLIQLATFLAIGP
                     QIYIDGLVVVLENQIQKQKQVEQNGIAGRAEQQITIQTVLGRIGSKHILQCIINPNSY
                     EPVRYYPESLYVRKASEIMEKITENLIIELDSPLRDVLDVFKKTRFAFIPIVETIDNN
                     NTKYHKAVASITVRDFLKLFTGLKKYENTKDASNSIADIDIERIKKMPAKDIASNLIS
                     VNEDDVLQNVLYVMFSKNIRNLGVMDKKSRVVGIINDRNILEFLISPATRMLVENNRD
                     SIGTLQTRKKIDDDIIAQKKIKQNLNLSDISEVKDDTTVSQAAQLLLDPRNPYLILEN
                     RNKIVTPWDIVMKTLSF"
     gene            complement(1363..1908)
                     /locus_tag="VLA74_09850"
     CDS             complement(1363..1908)
                     /locus_tag="VLA74_09850"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF51049.1"
                     /translation="MSIDQTSVTAIMAKNVELASDDQNIQNICQKMYEKKIGSIIIVE
                     EELFNESENISFERKEDNLLYNAGIITERDIVRFLGSGSILKFSLAGEIMSKPLITIN
                     STNSIKDALEYMNLKNIKRLPILDSNDHIIGIISFTDIVRYLIQTINQSPLLIENQIP
                     LYDESFINKLNEVWSHDYLPF"
     gene            2186..>2642
                     /locus_tag="VLA74_09855"
     CDS             2186..>2642
                     /locus_tag="VLA74_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51050.1"
                     /translation="MSDSYPSQSLQKSKKKKSRCITFRLEAGIVEELTKESEQKEISL
                     NVLVNQILRRYSEWDRYENKVGIIPVPRAIMTALIEKSLQIGKEAGINDLDMHRNLLI
                     KEAASVAFESLRESVLFMKNQFNLFSVLSTLEEYMKVCGINSEHKFDSGR"
BASE COUNT          893 a          377 c          389 g          983 t
ORIGIN      
        1 tttatccata tttataagga tcagttaatt tatttaatta ttaagcattc agtgtattgc
       61 aatgcaagat aaggaggcaa aaattataac acaaacagaa atatattttc gttcaaacta
      121 ataattcgtt attatgataa atacaatttt attttaacct ttatatcgta tgtataaaca
      181 tataatataa ttaaattata tatttgagcc caaacttatt gatgttctac ttttttgtgc
      241 ttaaatcatg atcatcaaac ttcattcaat tatacaacta tcaaattact ttttttatta
      301 tgctttttat ttccattcaa ctaattttaa aatgataatg ttttcataac aatatcccaa
      361 ggagtaacta ttttatttct gttttccaaa attaaatatg gattcctagg atccaacaaa
      421 agttgtgcag cttgacttac agtagtatca tccttgacct cagagatatc agagagattg
      481 agattttgtt taattttttt ttgtgcaatg atatcgtcat caattttttt tctagtttgt
      541 agtgtgccta tggaatcacg gttattttcc acgagcattc ttgtagcagg agatattaaa
      601 aattcaagga tattcctatc atttataata ccgacgactc tcgatttttt gtccattacc
      661 cctaagttgc gaatattttt gctaaacata acatatagaa cattttgcag tacatcatct
      721 tcgttcactg atatcaagtt cgaagcaatg tcttttgctg gcattttttt tattctttca
      781 atatcgatat cagcaatgct attactagca tctttggtat tttcatattt ttttaatcct
      841 gtaaacaatt ttaaaaaatc tctaacagta atcgacgcca ctgctttgtg atattttgta
      901 ttattattat cgattgtttc tactatggga ataaatgcaa atcttgtttt tttaaagacg
      961 tctaaaacat ccctgagggg tgaatctagc tctataatta gattttcagt tattttttcc
     1021 attatctcag atgcttttct aacatagaga gattcaggat aatagcgcac aggttcgtat
     1081 gaattgggat tgataataca ttgaagaata tgtttactac ctatcctacc taaaacagtt
     1141 tgaatggtaa tctgttgttc tgctcttcct gcgattccgt tttgttctac ttgtttttgc
     1201 ttttgaattt gattttctag aactactacc aatccatcta tgtaaatctg aggacctatt
     1261 gcaagaaagg tagcaagttg aattaaatct gagtttaggt aagtaaacga aattggacgt
     1321 ttggttagat gaggaaatgt ctcattaatg ggatcatcta aactaaaatg ggagatagtc
     1381 atgtgaccaa acttcattta gcttgttgat aaatgattca tcgtaaaggg ggatttgatt
     1441 ttcaattaaa aggggcgatt gattgattgt ttgaatgaga tatctaacaa tatcagtaaa
     1501 ggaaattatt cctattatat gatcatttga atctaaaatc ggaagtcttt taatattttt
     1561 caaattcata tactctaacg catcttttat agagttagtg gagttaattg ttattaacgg
     1621 tttactcatt atttcacctg ctaggctgaa ttttaaaatt gaaccagatc ctaaaaatct
     1681 gacgatatcc ctttcggtaa ttattccagc attatacaat aggttatcct cttttctctc
     1741 aaaagaaata ttttcagatt cattgaataa ttcctcttct acaattatta tacttcctat
     1801 ttttttttca tacatttttt ggcagatatt ttggatattt tgatcatcag atgctaattc
     1861 aacatttttt gccataattg cagtgacaga agtctgatca atactcataa taaaactatc
     1921 aataattgaa tatataaggt taatttggca gcagtgcatt aaaatgcaat atattaaatt
     1981 agttgcttca tatttcttag ctcaaggata atagtagcat ggtatgaaaa aattttggag
     2041 tttaaatgtt atgtttttct gttatctaat ttaataattt gaaatcagtt tcatgcaata
     2101 accacagatt gagaaaaata tatacaacaa atcggtttaa tatgtacact atctttttaa
     2161 attgccaatt aatatctttt catatatgtc agattcttac ccttcccaat ctttacaaaa
     2221 atcaaagaag aaaaaatcca gatgcataac ctttaggctg gaggcaggaa tagtggaaga
     2281 attaacaaag gaatctgaac aaaaagaaat ctcattaaat gttttggtta atcaaatttt
     2341 gagaagatat tctgaatggg atagatatga aaataaagta gggataattc ctgtaccaag
     2401 agcaataatg acagccttaa tagaaaagag cttacaaata ggtaaagaag ctggaataaa
     2461 cgacctagat atgcacagaa acctactaat taaagaggct gcgtcagttg cttttgaatc
     2521 actaagagaa tcagtattat ttatgaaaaa tcaattcaat ttatttagtg ttttatctac
     2581 tttggaagaa tacatgaaag tatgtggaat aaattcagaa cataaatttg attcaggaag
     2641 ac
//
LOCUS       DATIAS010000491         2010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_907194, whole genome shotgun sequence.
ACCESSION   DATIAS010000491 DATIAS010000000
VERSION     DATIAS010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_907194"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VLA74_09860"
     CDS             complement(<1..187)
                     /locus_tag="VLA74_09860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51051.1"
                     /translation="MRTKWIIGFIVIVGTVISIYTLSPLFISKEVEEPIPENLAIDAY
                     YKFQSLDDVERSNIASEM"
     gene            346..756
                     /locus_tag="VLA74_09865"
     CDS             346..756
                     /locus_tag="VLA74_09865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51052.1"
                     /translation="MTGIREIRRAFQGLQTLYETYLPKVDPRLINDLLSREKQGQEAA
                     PFYMVEIFTKSGIDEEAKREYIIRKTGMVPSIHDKGTHYVTNHRLTLELLGELAEPQD
                     VLEITGDYTGGLTGIGSSHGRQKEDKVYGSLIDM"
     gene            complement(780..1160)
                     /locus_tag="VLA74_09870"
     CDS             complement(780..1160)
                     /locus_tag="VLA74_09870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51053.1"
                     /translation="MINLSNNDQMDFNSLCKDIMNLDSKVRFAAVCDDSGDIKYGGQR
                     EGVTNLLSTEETKRSNLQALARWSLRNSLSSKIGKGQYAMAVYEKIKRITIPLENDHL
                     LLVTMETDSNHDKIINDILSLIKR"
BASE COUNT          762 a          272 c          304 g          672 t
ORIGIN      
        1 tcatctccga agcgatatta ctacgttcaa catcatctag tgattgaaat ttataatagg
       61 catcaatggc aaggttttct ggtatcggtt cttcaacttc cttgctgata aaaagtggag
      121 ataaggtgta tatactaata accgtaccaa caattacgat gaatcctata atccattttg
      181 ttcgcatagg taattcatat atttagaacc gaatatataa aataataaaa attgaattat
      241 aaattccact ttgaatatat aattgtgtta gaaaaattta cttggtaaaa ttgtagaatt
      301 ataaaaatta gaaatgctca tatactatta tagccaatca tgcctatgac aggtatccga
      361 gagataagga gagcttttca aggattacaa acattgtatg agacctattt acctaaagtt
      421 gatccaagac taattaacga tttgttatct agagaaaaac aagggcaaga agctgcacct
      481 ttttacatgg tagagatatt tacaaaatct ggaattgatg aagaagctaa aagagaatat
      541 ataataagaa aaacagggat ggttccatca atacatgaca agggaacaca ttatgtgaca
      601 aaccatcgtc taaccctgga gttgcttggc gagttggctg aaccacaaga tgttttagaa
      661 attacaggtg attatactgg tggtctgact ggaattggat catcacatgg aagacaaaaa
      721 gaagataaag tttatggaag tttaattgat atgtaaaaaa atatttaaga tagattttat
      781 tatcttttga ttaaagataa tatgtcattt attatcttat catgattaga gtctgtttcc
      841 attgttacca ggagaagatg atcgttctct aatgggatag ttatacgctt tatcttttca
      901 tacactgcca tggcatattg accttttcca atttttgagc tcaacgaatt acgtaatgac
      961 cacctagcta gtgcttgtag atttgatctt tttgtctctt cagtcgatag cagattagtc
     1021 actccttctc tttgaccacc atattttatg tcaccagaat catcgcaaac tgcagcaaac
     1081 cgaacctttg aatccagatt cataatatcc ttgcaaagcg aattaaaatc catttgatca
     1141 ttattagata ggttaatcat ataaatattg ttttaattta taatttttaa tgaatttatt
     1201 cgatgttaag aataggtcgt atttttacga catactatct ataatataaa gatgagattg
     1261 acaatactat aaactaatgt actataaatt agcgctatca gatacacgaa ttaagtgtta
     1321 ctagaaaatg acatgatcaa atagtaacaa gttgaaaatg taattatcca atatattatc
     1381 aacacatgcg aaaatatatt ctgccaatca atgtggtata gcaaaataat ttttccataa
     1441 atttaaaaat gaaggttaag tagcaatctt ttctctagta ttagtactaa ttacgaccag
     1501 aaaataaata tgtgaatact gttacacagg atttatatct actttttatt ggtagaatat
     1561 agaaatatag cttcataata aatcttatta tattattatg tgtcgtcata agatttaata
     1621 aacgcgaatt aaacacaaaa attaatagta tcaattttag ttaaaaaata tgtcatatta
     1681 gtggttaaaa agaaaagtcg atagtatatt catacgatga aatcggatat taaattaagt
     1741 tattaattta atcatattga aaaattatct aattccagca ttgaagaaaa gtataacgtg
     1801 attaggccat tagtatgatc agtagacgtt cgatcttgat gaataattac ctatgtgatc
     1861 acagtataga aaaaaaatat aataatacat gcaaaataat cgatttatat aataaaaaaa
     1921 tctaaaatca aaaagtatta ttctaggaat tgaatattta cctgcagtca attgacagtt
     1981 accattgaat atagcattat ttacatttga
//
LOCUS       DATIAS010000492         2049 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1585957, whole genome shotgun sequence.
ACCESSION   DATIAS010000492 DATIAS010000000
VERSION     DATIAS010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585957"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..580)
                     /locus_tag="VLA74_09875"
     CDS             complement(176..580)
                     /locus_tag="VLA74_09875"
                     /inference="COORDINATES: protein motif:HMM:NF021465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HSF51054.1"
                     /translation="MSLFTVIWALGMIAMMFPAIIPMILLYNKITIQKDKSDTILIAK
                     ENKIIYSLKTISFTATYIVVWTIVGLILYFGWSLSINNFVIEYFSDNQINILFGIILI
                     ISGVYQFTSLKKKCIGYCESPLALQKDGIMEQ"
     gene            complement(583..708)
                     /locus_tag="VLA74_09880"
     CDS             complement(583..708)
                     /locus_tag="VLA74_09880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51055.1"
                     /translation="MNNIQKLIILSLVSTSGLAWILSFATTDIMMNTMMIVDYIF"
     gene            complement(771..1418)
                     /locus_tag="VLA74_09885"
     CDS             complement(771..1418)
                     /locus_tag="VLA74_09885"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HSF51056.1"
                     /translation="MELSPSSITQIPTWHLKADYVETCNCDYGCPCNFDAFPTYGFCR
                     ALVLYHIREGNYGDVKLDGLDIVGAYSWPKAIHEGNGTIQLYITKKALEDNNIKDALV
                     DIFSGNAKGEGPFALFAGTFKYFLEPQFVDINVKIDGKRSSFSVPDIMDVQVESFINP
                     VTGEEQDTKIQLPKGFIWKLAEAAKTKIMRISTPSLNFDDSGKNAFYSVVEYRGP"
     gene            1715..2008
                     /locus_tag="VLA74_09890"
     CDS             1715..2008
                     /locus_tag="VLA74_09890"
                     /inference="COORDINATES: protein motif:HMM:NF025113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51057.1"
                     /translation="MPANKSWHDYNESLIERGSVLIDLDFIRSSNEEIMNMNKDKVGA
                     PFQYSDNYIQFLAFLKIGFKIPYRTVQGIVRGLSDYVRRIEEIHFTHITGDEF"
BASE COUNT          726 a          327 c          259 g          737 t
ORIGIN      
        1 cctgtaattc ttgaaatcca tattcctttt gaccatattt tttctccaaa tattattcca
       61 gcaaataggc ccatccatac tatattcatc catcctaatg ctaccatcaa tagaaaataa
      121 ggccaacagc atcctaagca atataatcca tgatatgttc ccatttttat tgctcctatt
      181 gttccattat gccatctttt tgtaaagcta aaggggattc acaatatcca atgcatttct
      241 tttttaatga tgtaaattga tatactcctg agataataag aattatacca aataaaatat
      301 tgatttggtt atcggaaaaa tattctatga caaaattatt tatagacaaa gaccatccaa
      361 agtacaaaat caatcctaca attgtccaaa ctacaatgta tgttgctgta aatgaaattg
      421 tctttagaga atagatgatt ttattttctt tagcaatcaa tatagtatca gatttgtctt
      481 tttgtatggt tatcttattg taaagaagaa tcattggtat tatagctgga aacatcattg
      541 caatcattcc taaagcccag attacagtaa ataatgaaat gtttaaaaga tataatcaac
      601 tatcatcatt gtattcatca ttatgtcagt agttgcaaaa gaaagaatcc atgctaaacc
      661 tgaagttgaa acaagagata aaatgattaa tttttgaata ttattcatag taacaaaaaa
      721 tgtaatgata aatattttat tatttgtaat tttattatta ttatgttttg ttaaggtcct
      781 ctatactcta caactgaata aaatgcattc tttccagagt catcaaagtt taaacttggc
      841 gtactaatac gcattatctt tgtttttgct gcttctgcaa gtttccagat aaatcctttt
      901 ggtagttgta tctttgtatc ctgttcttcg ccagttaccg gatttatgaa actttcaact
      961 tgtacatcca ttatatcagg aacagagaaa ctgcttcttt ttccatctat cttgacattg
     1021 atatctacaa attgaggttc aagaaagtat ttaaatgtcc ctgcaaagag agcaaaagga
     1081 ccttcccctt tagcattacc tgaaaatata tcaactaatg catcttttat attattatct
     1141 tctaatgctt ttttagtaat ataaagttgt attgtaccat ttccttcatg tattgccttg
     1201 ggccaagaat atgcaccaac tatgtctaag ccatctaatt ttacatctcc ataatttcct
     1261 tctcttatat gatataatac taaagctctg caaaaaccat aggtaggaaa agcatcgaaa
     1321 ttacatggac agccataatc acaattacat gtttcaacat aatcagcttt taaatgccaa
     1381 gtaggaatct gtgtgataga agatggtgat aattccatta tcaataacta attcttattt
     1441 atataaaaga atatcttcat aatataaaaa ttaatttgat tattgatatt taaaaagttc
     1501 aaattaaaag atattacttt ttgtattaat aaaaaaccag cataagcaat cattttacac
     1561 aaattttaat ttattttgca tttgaaatta tatccattaa actacaaaat gaacaaattt
     1621 ttatctatat ttattcttat tttctatact taattaagtt tctaatatag tttgtagcat
     1681 aatttttatc atcttcttcc aatcattcta acacatgcca gcaaacaaat catggcatga
     1741 ttataatgaa tctttgatag aacgtggaag tgttctaata gatttagatt ttatcaggtc
     1801 ctccaacgaa gaaataatga atatgaataa agacaaagtt ggagcaccat tccagtattc
     1861 tgataattac atacagtttt tagcattcct aaagatcggt ttcaagattc cataccgtac
     1921 agttcaagga atcgtacgtg gattatctga ctacgtaaga agaattgaag agatacactt
     1981 tacacatatc acaggagacg aattctaaaa ataaaattat ctgttgggaa tctagatttt
     2041 tgagatcct
//
LOCUS       DATIAS010000493         2284 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1586095, whole genome shotgun sequence.
ACCESSION   DATIAS010000493 DATIAS010000000
VERSION     DATIAS010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1586095"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VLA74_09895"
     CDS             <1..215
                     /locus_tag="VLA74_09895"
                     /inference="COORDINATES: protein motif:HMM:TIGR01439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HSF51058.1"
                     /translation="DKNIGHCRVLKGGRITIPKEVREKLSIKDGDFVDFLFTRYGSIK
                     IIKFEFDWNKAMKQIDSLRKQKLLLS"
     gene            273..461
                     /locus_tag="VLA74_09900"
     CDS             273..461
                     /locus_tag="VLA74_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51059.1"
                     /translation="MSEDETRANTLYFSIKPLDNWAYQNAAYDSTTIFGRGFNDAIEM
                     FPNEFLNSSQVYEIADGW"
     gene            complement(565..750)
                     /locus_tag="VLA74_09905"
     CDS             complement(565..750)
                     /locus_tag="VLA74_09905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51060.1"
                     /translation="MFNDNPILIDVNSRRINKQMILCVLCKIQLNCINPEENRYKCPR
                     CKNTYQLGFELLPSEDS"
     gene            complement(756..986)
                     /locus_tag="VLA74_09910"
     CDS             complement(756..986)
                     /locus_tag="VLA74_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51061.1"
                     /translation="MEQNMSFMISHCRRILWDSKGLIVINPVFDKLIVGLKSSVVDNR
                     GLLDKQVTISDDLVDAFQIMFTFFKFKSSSDY"
     gene            1101..1874
                     /locus_tag="VLA74_09915"
     CDS             1101..1874
                     /locus_tag="VLA74_09915"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSF51062.1"
                     /translation="MDEIINKLHKYYIFDIIVIATIFLIIGIAIQQPIINDIYSMTPT
                     KLAGFLEKDDVNVTERDKLLKEEVKFESIDLSYKNFSGVDLRSLIALNSKIFNLTLEG
                     SHLENFQFSGNLSNTNMSNLLYFTGADLKKVNLTEANLATANLYDTNLTDADLTSADL
                     TDADLTHADLTNANLTFTDLKEAILIDADLTNATLIGADLTDAILLDTNLTNADVNHA
                     NFNGTFFNCASLNTINITEDLTIQNIILLDSNFKKITSC"
BASE COUNT          822 a          315 c          340 g          807 t
ORIGIN      
        1 gggataaaaa tattggacat tgcagagtat tgaaaggtgg aagaattacc ataccaaagg
       61 aagttagaga aaaattgagt ataaaagatg gggattttgt agattttttg tttacaagat
      121 atggatcaat caaaataatc aagttcgaat ttgattggaa taaggcgatg aaacaaattg
      181 atagtttaag aaagcaaaaa ttactgctaa gttaacagag cccattattt agtgttgtaa
      241 atatttatgc acaagaaact tcttcctttg atttgtcaga agacgaaaca agagcaaata
      301 ctctatattt ttccataaaa cctttagata attgggctta tcaaaatgct gcttatgatt
      361 ctacaactat ctttggtaga ggattcaatg atgctataga aatgttccca aatgaatttc
      421 ttaatagttc acaagtttat gaaattgcag atggatggta agaaatacca ttcgttcttc
      481 ggtggatgat aatagtaaaa aattgtaaag atattgtgtt gttatttcgt cattgttgtt
      541 tggttactgt ccattgactt gccttcaact atcttctgaa ggaagcagtt caaaacctag
      601 ttgataggta tttttacaac gtggacattt gtatctattt tcttctggat tgatacaatt
      661 taattgaatt ttacaaagta cacataatat catttgtttg ttgattcttc tagagttaac
      721 gtctattaat attggattat cattaaacat aattattaat agtcagagga agatttaaac
      781 ttgaagaaag taaacattat ttgaaatgcg tctactaaat cgtctgagat agttacttgt
      841 ttatctaata gacctctatt gtccactaca gatgacttta gtcctactat caatttatca
      901 aatactggat ttatgacaat aagtcctttt gaatcccaca gaattcttct acaatgagat
      961 atcataaaag acatattttg ttccatttat atcagattaa aagaaaataa tagtttgttt
     1021 gtatcaaagt ctataaagga agttaaagag aagaataact atatagaata ttgtaaagaa
     1081 aatgcaaaag taataaaaga atggatgaaa taattaataa actacacaaa tattatatat
     1141 tcgatataat agtaatagca actattttct taatcatcgg tattgctata caacaaccaa
     1201 ttataaatga tatttatagt atgactccca caaaattagc aggattttta gagaaagatg
     1261 atgtaaatgt aactgagagg gataagttat taaaagaaga agttaaattt gaatcaattg
     1321 acctctcata taaaaatttc tctggtgtgg acttaagatc gttaatcgcg ttaaattcta
     1381 aaatatttaa tttaacttta gagggttcac atttagaaaa ctttcaattt tctggcaact
     1441 tatcaaatac aaatatgagt aatttattat actttacagg tgcagattta aaaaaggtta
     1501 atctcactga agcaaatcta gcaactgcaa atttatatga tacaaatcta acggatgctg
     1561 atcttaccag tgcagatcta actgatgctg atctcaccca tgcagatctc acaaacgcaa
     1621 atcttacctt tacagatttg aaagaggcta tccttataga tgcagatctt acaaatgcta
     1681 cccttatagg tgcagatcta acagatgcta ttcttctaga tacaaatctt acaaatgctg
     1741 atgtgaatca tgcaaatttt aatggtacat tcttcaattg tgcaagtctg aacacgatta
     1801 atattacaga ggatttaaca attcaaaata ttatactact tgattcaaat tttaaaaaga
     1861 ttacaagttg ttagataatg atgatataaa taaaatatca aatattgatt cttcagaaga
     1921 actaaattga actaaaattt cctatttgga tctttgcaag tagattcttc ttcgctacct
     1981 aacatgaatc cttcataatt gtcattgtta ttgttattag ataactgaaa tcataaatat
     2041 ttaaaaatca gtgaacaagg ttaatttcta atttattatt atttttattg tatgaaatca
     2101 ttctattgtg ttatcatctt tattttttat tcattatcct agtggggttg ttgcctaatt
     2161 cgacacaaca tacggtgtcg tcatctttat ttctagtctt tttgcgcatt gcaatctgtt
     2221 tagaacaccc atgttccatc ctatacccat tatcaatcca aatcttttct ggttattctt
     2281 taat
//
LOCUS       DATIAS010000494         4424 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_362593, whole genome shotgun sequence.
ACCESSION   DATIAS010000494 DATIAS010000000
VERSION     DATIAS010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4424
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362593"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1018)
                     /locus_tag="VLA74_09920"
     CDS             complement(29..1018)
                     /locus_tag="VLA74_09920"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HSF51063.1"
                     /translation="MFGDRRKNILKAISKYGGRNLISFKPENIYYLTGFWGEGVLLVH
                     QDLTRLYTPKLEYDRANLDSKDCEVVQSERGNDILFSVISDLKSSDSSITDCEEYNRV
                     EYLRNHTGKKRIIVNDEPFFKCRMIKDKEEIRNIQNAAKIIDHLFEVCINEVKVGISE
                     RQLQATLVYEALKKKASLPSYRSTLNPFIIASGPNGALPHSSVSDRRFKTGDFIVVDI
                     TLRYKGYVGDATRTFALGRISSEMKKIYEIVKESQDLGVKNSCENTTAGEVDKICRDF
                     ISNRGYNEEFNHSTGHGIGLDVHEPPWIRKNNKQILNNNMTITIEPGIYLKYV"
     gene            2342..3484
                     /locus_tag="VLA74_09925"
     CDS             2342..3484
                     /locus_tag="VLA74_09925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HSF51064.1"
                     /translation="MEYLVMLPGPTNVPNRVMNAMLAPIINHRSEDFRVLYKGIIEKT
                     QKVFDTSSDIILLTTSGTGAVESSVVNLIKKGDKAIIPVNGEFSTRLADLIDSWGGTA
                     IRVNAPFGQNPPIEEIEKAFEDNKDVKAVYAVYNETSTGTTIRYMDKLGDLCSKFGSF
                     FVADAVSILGGDELPVDKWNVDICITASQKALAAPPGVSPVSINERTKKYMQSNPSPI
                     LYLNFNRYFRYYQEHIETPFTPALPLYYAFDEALNIIMDEGMTKRIQRHRTCADAFYS
                     SLNSLGLTPFAYENARSNVVIALNYLDGMDDKKFRTLLSDKFRVLVAGGFGNLKGKVF
                     RIGSMGEVNEYHVMRTMSSIYSAMTMLGIEVNKEALSVAEEKLKKL"
     gene            3547..4296
                     /locus_tag="VLA74_09930"
     CDS             3547..4296
                     /locus_tag="VLA74_09930"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSF51065.1"
                     /translation="MPFEKGSLILLDYTARIKDNNEIFETTREEDAKNSNLYDPVRKY
                     EPRLVSIGEGWVLRGVDEALSTANVGDKLVIEISPDKGFGDRDPNKIRMIPQRKLGEK
                     AAEIKVGDVVEIDERPGIVRYIGSGRVQIDYNHRLASRSLVYDVNIIQKLDTNEEKIK
                     NLMKRRLPLNEEKIKFEMQDDTLEIELPEDVLLLDGLQIIKRAISTDLFKFITSLKKI
                     IFKEVYSLSSSKGSQKLEATTAEATTAEATT"
BASE COUNT         1518 a          682 c          693 g         1531 t
ORIGIN      
        1 ctttcagaaa ttcctacctt tacctcattt atacatactt caaataaatt cctggttcta
       61 ttgttatggt catattatta tttaagatct gtttattgtt tttgcgaatc caaggaggtt
      121 catgaacatc caaaccaatt ccatgtcctg tagaatgatt aaattcctca ttgtaacccc
      181 tatttgaaat aaaatctctg caaattttat ctacttctcc agctgttgtg ttttcgcaag
      241 agtttttaac ccctaaatct tgggactctt taactatttc atagattttt ttcatttctg
      301 aactaattct cccaagagca aaagttcttg ttgcatctcc aacatatcct ttatatctta
      361 atgttatgtc taccacaata aaatcacctg tcttgaatct tctatctgaa acacttgagt
      421 gtggtaatgc tccatttgga ccacttgcga taataaaagg atttagagtc gatctgtacg
      481 aaggcaagct tgctttcttt tttaaagcct catatactag tgtcgcctgt aactgtcttt
      541 cagaaattcc tacctttacc tcatttatac atacttcaaa taagtgatct atgatctttg
      601 ctgcattttg aatatttcgt atttcttcct tatctttaat cattctacat ttaaaaaacg
      661 gctcatcatt gacaatgatc ctttttttac ctgtatgatt cctcaaatat tcaactctat
      721 tgtattcctc acaatcggtt attgatgaat cgctactttt taaatcggat ataacagaaa
      781 ataaaatatc attccccctt tcagactgaa cgacttcgca atcctttgaa tctaggttag
      841 ctcgatcata ctctagtttc ggagtatata accttgtcag gtcttggtgg accagcagta
      901 ctccctcccc ccaaaatcct gtcaaataat aaatattttc tggtttaaag gaaattaaat
      961 ttctacctcc atactttgat atagctttta gtatattttt tctgcggtca ccgaacatat
     1021 ttttagtttg taatcttatc ttttattcct tttcaataat attataggta tatttgttct
     1081 aaacacggat taatactttc aaatggaagg atacaagttt tttactaatc taaggattag
     1141 tataaaaaaa gatggttcct attatgataa taatacaatt tcagttttta tgatttaggg
     1201 atatgaaatc aggaatgaaa gtaggaaaga atgttagatg taaaaaaact aaccatttaa
     1261 aaagaaattt gatagtaatg gacacacaaa tgaatttaat aaatggatga atagtgtctc
     1321 ttattgaaaa atatcgattg tagaatctgt tttttccttc ctgaaaagat gttatgaata
     1381 taatggcagt taaatttccc aacatgataa agaaatgatc atgaaaacat cactctacaa
     1441 tttgtttacc tccataacat aatataactt actccaaaat gcattttgtc agaaaatatt
     1501 attatttcta gattagtttt tgaaaatgaa actattatgg cttcaggatg ttggatatta
     1561 ttacattaaa tcggagagtc tttcttcata tgtcatttag acttagaatt aaaacaattg
     1621 ttattattat cggaaagaat aaaaaaatgt gtcaaacctc gttttcaata atatcctaat
     1681 caatcatttg ataatagtgc tgcaaaaaca gacaattgat ttctaaaatt ttaataaaac
     1741 tttttcaccc tcaatattat aatatttttc atttctttta atagtttatt atcataaaat
     1801 attgctccaa tcatcttatg ttcgactaaa tataatcaag atatttttta aaattatcat
     1861 tgtcgatttt ttataatact cggtggaaaa tattttactt gatttgtatt aaggctttta
     1921 gctgatttta tttattgtac tttcaacatg atctacagta aaaagatgac atgcatctcc
     1981 atatatatta tacttccatc tcgacgttag attaaattga taacttcaga gtttatatct
     2041 ttttttgcta aaactgaagt atacctaaaa tattaaatgt cgatttttaa ttatttaatg
     2101 gtaattctat gagtttataa atttaattta acaagattaa tgtatagcct tatttcttaa
     2161 aaaatttgtt ttaacgatgt aaaaaagtca atacttggtg taactataaa taagaatttt
     2221 actcatatgt atagaaattt tttatcacta aaagccatta taaattgggg atttttagtg
     2281 gacctatttt cggttaaata tatattaaaa tataggttca acagactgtt attgaaaaat
     2341 catggaatat ttggttatgt tgccaggtcc aactaacgtt ccaaatcgtg tcatgaatgc
     2401 tatgcttgcc ccaataataa atcatcgtag cgaagatttt cgtgttctat ataagggaat
     2461 aatcgaaaag actcagaaag tttttgatac ttcaagtgat attattcttc ttaccacatc
     2521 tggaactggt gcggttgaat cctcagtggt taatctaata aagaaaggtg ataaagcaat
     2581 aattccagtt aatggtgaat tcagtacacg tctagccgat ttaattgata gttggggtgg
     2641 aacagcaata agggtcaatg cgccatttgg tcagaatccc ccaatagaag aaatagaaaa
     2701 ggcatttgaa gataataaag atgttaaagc agtttatgct gtgtacaatg aaacatcaac
     2761 tggcactact ataagatata tggataaact tggagatctt tgcagcaaat ttggctcatt
     2821 ttttgtcgca gatgcagttt caatactagg aggagatgaa ctcccagttg ataagtggaa
     2881 cgtggatatc tgtataactg cctcgcaaaa ggcattagca gcacctcctg gggtatctcc
     2941 ggtgtcgatc aatgaacgaa ccaagaaata catgcagtct aatccttcac caatactata
     3001 cctaaatttc aataggtatt ttagatatta ccaagaacat atagagaccc ctttcactcc
     3061 ggcattacct ctctattatg catttgatga agccttaaat atcattatgg acgaggggat
     3121 gactaagaga atacagaggc atagaacatg tgctgatgca ttttattcta gtcttaatag
     3181 tctaggatta actccttttg cttatgaaaa tgctagaagc aatgttgtta ttgcgttaaa
     3241 ctatctcgac ggaatggacg ataaaaaatt tagaacacta ttatctgata aatttcgggt
     3301 tctagttgcc ggaggatttg gtaatcttaa gggtaaagtt ttcagaattg ggagtatggg
     3361 tgaagtgaat gagtatcatg ttatgagaac aatgtcttct atttattctg ccatgacaat
     3421 gctcggaatt gaagtaaaca aagaggcctt atctgtggca gaagaaaaat tgaaaaaact
     3481 ataaaccaat taaacatttt ttaattttcg tcaagcttaa tataaggtaa attaatagcg
     3541 atttttatgc cttttgaaaa aggatcgcta atactgttag attatactgc aagaataaaa
     3601 gataataatg aaatttttga aactacccga gaagaagatg ctaaaaattc gaatttatat
     3661 gatccggtaa gaaaatatga acctcgtctt gtatcaattg gagaaggatg ggttctcaga
     3721 ggcgtagatg aagcactttc tactgctaac gtaggcgaca aattagtgat tgaaatttct
     3781 ccagataaag gcttcgggga tagagatccg aataaaatcc gaatgattcc acaaagaaag
     3841 ttgggagaaa aagctgccga aataaaggta ggtgatgttg tagagattga tgaaagacca
     3901 ggtattgtaa gatatatagg ttctggacgc gttcaaatag attataatca tagacttgca
     3961 agtagaagtt tggtatacga tgtaaatatc atccagaaat tggacacaaa cgaagaaaaa
     4021 ataaagaatt taatgaaaag acgtcttcca ctcaatgaag aaaagataaa gtttgaaatg
     4081 caagatgata cacttgagat cgaacttccc gaagatgttt tgttattaga tggattacaa
     4141 ataattaaac gagctatttc taccgatctt tttaaattta taacttccct taaaaaaatt
     4201 atattcaagg aagtatatag tttatcatct tctaaaggct ctcaaaaatt agaagcaaca
     4261 actgctgaag caacaactgc tgaagcaaca acctagatca gagagtcaat ctatcaatta
     4321 ttttttatgt aaatactttt atttctgacc atttatgaga actaaaatca aattactttt
     4381 acatctttgg ccaattcata agcagttttc cgatctaatt tatt
//
LOCUS       DATIAS010000495         3782 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_362672, whole genome shotgun sequence.
ACCESSION   DATIAS010000495 DATIAS010000000
VERSION     DATIAS010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362672"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..829
                     /locus_tag="VLA74_09935"
     CDS             263..829
                     /locus_tag="VLA74_09935"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSF51066.1"
                     /translation="MDIYGYYGILGLTMDSDSIEIKKTYRKLVKKYHPDKNSGKEYDL
                     EMIKKINIAFEVLSDNNKRGFYDKLCLEIENNEIVNDFNLGTNLENEKTVLDNEPNDN
                     SKKYGPIKKKSRFNILIEPSLCMAFGSCEILAPHVFIVEKNKMINPKAVVISESGDDF
                     ENILDAAQTCPTKAIKIIDKLTGRQIFP"
     gene            902..1765
                     /locus_tag="VLA74_09940"
     CDS             902..1765
                     /locus_tag="VLA74_09940"
                     /inference="COORDINATES: protein motif:HMM:NF019887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HSF51067.1"
                     /translation="MSRFLIFSDIDNTLVQSYIARNREMIHSDGYGDIKKVIKILSEN
                     QIPLVLCSTKTRKEQDKIRNDLDIVDPYIVENGGAIIVPKNYFPFNLDEFGLGTKEID
                     GNMNLELGKSYEQIITILNDIRNKFHIRFNCVSDFSVTELANKVGISVEGATLMASRE
                     YSETILEIESANRVELEKALTERNLIMVQGTRYITVSARHDKGCAVSILKNLFYKKYR
                     NEKIQVIAIGDAINDITMFENVDQAFLVRNIFNQYTPMEINNLTRVNGIAQDGWKEVV
                     LDHILQRNWKK"
     gene            1714..>3782
                     /locus_tag="VLA74_09945"
     CDS             1714..>3782
                     /locus_tag="VLA74_09945"
                     /inference="COORDINATES: protein motif:HMM:NF013256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004559 - alpha-mannosidase activity
                     [Evidence IEA];
                     GO_process: GO:0006013 - mannose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 38 C-terminal
                     domain-containing protein"
                     /protein_id="HSF51068.1"
                     /translation="MEGSSIGSYITEELEKMSDPTIHVVPHMHYDAVWILNKQDYYFV
                     NIEVILKQAINLIKKSDYKFIIEQTFLLEKVEKDYPNLFSEISDLIKENKMEIAGGQY
                     LLADTMVPNGEVLIREIIEGKKFVKDKLNQEVLVAYGADEFGFNAQWPQILRSAGYKY
                     CIFRRGIDNSTPSEFFWQGLDGTQILTHWMPLGYRAGLFLTDLDKSYKKLKKHSATNQ
                     ILMLSGSGSTPPQPELIDAIEDWNKKSVNKDGKYTKRHKMSISTPLRFFRDLEKQNIK
                     FMTRKGEMYSGKFSAVYPESTSTRMWIKQGTKEFENSILLLERLDAISWMVNIHDDNI
                     SDLLSKHWKEMLFVAMHDVLPGTGVDEVYKEIGEIFDNAKKSIGKSIQEYLKKLSLKT
                     PNNKDIFVFNPLSWEVTNWTELILEFDQQEVIGISGLKDEDQSIEIEIVDYSLYPDNS
                     IKKIKIGFLISIPSLGYKTLQLVRSENINLETIVTHDTNFKNKEYDIEINRENAIITV
                     SKINKNNEKVHYLTGNEICLDEEIGDLYYHRENLGLLKSESGDGVKYGIFNPEKYEVI
                     NGKFKTHIKFKSKYYALRWPYRFTEKLKPMLFRHDFVDIEKEIIIYKNLNRIDFITHI
                     FDKHPHSRLRVKFDTHIKSSNYWCGTQFGAIQRDTNLYYKRNEPYWFEKPSGVFPSFE
                     WVDYISE"
BASE COUNT         1464 a          493 c          668 g         1157 t
ORIGIN      
        1 atagatttga attcattttg aggtctaatt tttacagatt atagtatctg tattttatat
       61 aaacaaaaaa aagtatttat ccttaataat gatgattttt ttggacatcg atcgagtatt
      121 gttgaagaaa ttctaataat cttcagacct ctttaaaaca gctaaagtta atgtctcgtt
      181 tctgtgaaat cgctttaaat ctgctttaaa tgcaatacct gtttcataga aattaaataa
      241 gaaggagata cataattgat agttggatat ttacggatat tatggtattc ttggattaac
      301 tatggattca gatagcattg aaataaaaaa aacttataga aagctagtca aaaaatatca
      361 tccagataag aactctggaa aagagtacga tttggaaatg ataaaaaaaa tcaatatcgc
      421 ctttgaagtt ttatctgaca ataataagcg gggtttttat gataaattat gtcttgaaat
      481 agaaaataat gaaattgtta atgattttaa tttaggtacc aatctagaaa atgaaaaaac
      541 agttttagat aacgaaccta atgacaattc caaaaaatat ggtccaataa agaaaaagtc
      601 aaggtttaat atattaatag aaccttcttt gtgtatggca tttggcagtt gtgagattct
      661 agctcctcat gtgttcattg ttgaaaagaa taagatgatt aatcctaaag cagtagtgat
      721 atccgaatct ggagatgatt ttgaaaacat attagatgca gcccagactt gtcctacaaa
      781 agcgataaaa attattgata aattaacagg cagacaaatt ttcccttgat atagaaaatt
      841 cttatgtaag ttcttacgtt aaagtataaa gttattcatt taaaacaaag agtaaaaaga
      901 tatgtcacgg tttttaattt tttctgatat tgacaatacc ctagtacaat catatatagc
      961 aaggaataga gaaatgattc attcagacgg ctatggagac attaaaaaag ttattaagat
     1021 tctttcagag aatcaaattc ctctagtatt atgttcaact aaaactagaa aagaacaaga
     1081 caaaataaga aatgacctag atatagttga tccctatatt gtagaaaatg gaggtgccat
     1141 tattgttcca aaaaactatt ttccgtttaa tcttgatgaa tttggtttgg gaaccaaaga
     1201 gatagatgga aatatgaatt tggaattggg aaaatcctat gagcaaataa taacaatcct
     1261 taacgatata cggaataagt ttcatattag atttaattgt gtttctgatt tttcagttac
     1321 cgaattagct aataaagttg gaatatcagt ggagggtgca acattgatgg catcaaggga
     1381 atatagtgaa accatactgg agatagaatc tgccaatcgt gtggagttgg agaaggctct
     1441 aactgaaaga aaccttatca tggttcaagg taccagatat atcacagtct cggcgcgaca
     1501 cgacaaagga tgtgcagttt ctattctaaa aaatcttttt tataaaaaat atagaaatga
     1561 aaagattcaa gttatagcta ttggagacgc tatcaatgat attaccatgt ttgaaaatgt
     1621 cgatcaagct ttcctagtaa ggaatatttt caatcaatat acacccatgg aaattaacaa
     1681 tctaacaaga gttaatggga tagctcaaga tggttggaag gaagtagtat tggatcatat
     1741 attacagagg aactggaaaa aatgagtgat cccactattc atgtagttcc tcatatgcat
     1801 tatgatgcag tatggatatt gaataaacaa gactattatt tcgtcaatat tgaggttatt
     1861 ttaaaacaag ccataaatct tatcaaaaaa tcagattaca aatttatcat tgaacaaact
     1921 tttcttttgg aaaaagtaga aaaagattat cctaatcttt tctcagaaat aagtgatcta
     1981 ataaaggaaa ataaaatgga aatcgctggg ggtcagtatt tactcgcaga tacaatggtt
     2041 ccaaatggag aagtgctaat aagagaaata attgaaggta aaaaatttgt aaaggataaa
     2101 ttaaatcaag aggttctagt tgcttatggt gctgatgaat ttggatttaa tgcacagtgg
     2161 ccgcagattt taagaagtgc aggatacaaa tattgtatat tcagaagggg catagataat
     2221 tcaacgcctt ctgaattttt ttggcaaggt cttgatggaa cacagatctt gactcattgg
     2281 atgccattag gttatagggc cggattgttt ttaacagatt tagacaaatc ttacaagaaa
     2341 ttaaaaaaac attctgcaac aaatcaaatt ttgatgcttt ctggaagtgg ttcaacgcca
     2401 ccacaaccag agttaatcga tgcgatcgaa gattggaata aaaaatcagt taataaagat
     2461 ggaaagtata caaaacgaca taagatgtct atttctaccc ctcttcgatt ttttagggac
     2521 ttagagaaac aaaacatcaa atttatgacc agaaaaggag agatgtattc aggaaagttt
     2581 tcagcagtat atccagaaag tacatcaact cgtatgtgga taaaacaagg cacaaaagaa
     2641 tttgaaaaca gcatattatt acttgagaga cttgatgcaa tttcttggat ggtgaatatc
     2701 catgatgata atatttcaga tttactttca aaacactgga aagaaatgct atttgttgcc
     2761 atgcatgatg ttttgccagg aacaggagta gatgaagtat acaaagaaat aggagaaata
     2821 tttgataatg caaagaaaag cattggcaag tcaatccaag agtatctgaa aaaattatct
     2881 ttaaaaacgc ccaataataa ggatattttt gtttttaatc ctctatcatg ggaagtgact
     2941 aactggacag aactaattct ggaattcgac caacaagaag tcattgggat ttccggacta
     3001 aaagatgagg atcagagcat agaaatagaa attgtagatt attctctcta tccagataac
     3061 tctataaaga aaataaagat aggatttcta atttcgatcc cctcacttgg atataaaacc
     3121 ctacaacttg ttaggtcaga gaacatcaat ttggaaacca tagttactca tgatacgaat
     3181 tttaaaaata aagagtatga tattgaaatc aatagagaga atgctataat aacagtctca
     3241 aaaattaaca agaataacga aaaagtacat tatttgacgg gaaatgaaat atgtttagat
     3301 gaagaaattg gagatttgta ctatcataga gaaaatttgg gactgctaaa gtctgaatct
     3361 ggagatggag taaaatacgg aatattcaac cccgaaaaat acgaagtaat aaatggaaaa
     3421 tttaagacac atataaagtt taagagtaaa tattatgctt taagatggcc atatagattt
     3481 accgagaaat taaaacccat gctctttaga catgatttcg ttgatataga aaaagaaatt
     3541 ataatttaca agaatttaaa tcgaatagat tttataaccc atatttttga caaacatcct
     3601 cattctagat tgagggttaa atttgatacc catattaaat cctcaaacta ctggtgtggg
     3661 acacaatttg gagctatcca aagagatact aacttatatt ataaaagaaa tgaaccctat
     3721 tggtttgaaa aaccatctgg agtttttcca tcatttgaat gggttgatta tatttctgaa
     3781 aa
//
LOCUS       DATIAS010000496         2577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1586506, whole genome shotgun sequence.
ACCESSION   DATIAS010000496 DATIAS010000000
VERSION     DATIAS010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1586506"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..537)
                     /locus_tag="VLA74_09950"
     CDS             complement(40..537)
                     /locus_tag="VLA74_09950"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF51069.1"
                     /translation="MTVYNKILVPYDSSKPSEIALEHAITIAKMSVIYANTRINVIVL
                     YVVQEIQVPATFGISLFKSKQTGDMITLEQYLKDTTLEIKKDAENMLEENIEKYRNIE
                     NVSLETQVLIGDPSNEIIKFANDEKIDLIIMGTTGLGGLSKIVSGSVAKNVSEKAKCP
                     VMLVR"
     gene            843..1931
                     /locus_tag="VLA74_09955"
     CDS             843..1931
                     /locus_tag="VLA74_09955"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF51070.1"
                     /translation="MDQFVIIPSSDENLSEIIYFEPRIVKILNGMSITWMNRDTKTHR
                     LTSGNADSLLPTEFFHTDDIVGGKSTTVRIESNQQAIPYYCSLHPAERGLIVILPKGE
                     DEKTNTQRLKFLDSIAPTLFDTENREIVTRLQRQVDPAVFEYLSNPNAVLLQNKVLTI
                     VFWDISGFSILCEKLIDHPELVAEFLREYLGVATKIIHEHMGIVDKFIGDGILAYFGF
                     KEKDYDNNGYTGAENAILAALKLKRPFENVKNNWLQIWNKVIDFDIHIDIKCGINTGP
                     VLVGLLRSGERDQFTVIGTHVNLASRLEGRAEEGEIIISTFTMAKVRGKFNVEAIDIS
                     NNDDDKIKSFKGVDKYYKVLDISSSNSS"
     gene            complement(2060..2263)
                     /locus_tag="VLA74_09960"
     CDS             complement(2060..2263)
                     /locus_tag="VLA74_09960"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HSF51071.1"
                     /translation="MSASVGMLGGARAQYHPRQIFVYLNMYPINGPEVIITFAQNKFD
                     TNGNLVDENTQMFVRQLLRNFVN"
     gene            complement(2370..>2577)
                     /locus_tag="VLA74_09965"
     CDS             complement(2370..>2577)
                     /locus_tag="VLA74_09965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51072.1"
                     /translation="DGNNKPGLDHYAIKLHNKNDLFLLKDRLLEFKIDVDEKMVEKED
                     NQFFSSFYAYDFDGIKIQFLYNNH"
BASE COUNT          916 a          368 c          351 g          942 t
ORIGIN      
        1 aatacaaata atacaataag tatttcaata taatagtaat taacgaacta acataactgg
       61 acattttgct ttttctgata catttttagc aacactacca gatacaatct ttgaaagacc
      121 acctaatcca gtagttccca taattattag atctattttt tcatcattag caaattttat
      181 tatttcgtta gatggatcac caattaatac ttgtgtctct aaagagacat tttcaatatt
      241 tctatatttt tctatattct cttcaagcat attttcagca tcttttttaa tttctagtgt
      301 ggtatctttt agatattgtt ctagtgtaat catatctcct gtttgctttg atttaaataa
      361 actaatccca aaagtagcgg gcacctgtat ttcttgtaca acgtatagca ctataacgtt
      421 tatccttgta ttagcatata ttaccgacat ttttgcaatt gttatagcat gttctaaagc
      481 aatttctgat ggttttgaac tatcatatgg aactaatatt ttattatata ctgtcattat
      541 gattttctaa gatatacaaa tataacaaag aatattacct ttattattat ctttgaatca
      601 gcaaaattta ttgatgtagc tacaaatgag tttcattaat tattcaattt aaatttttat
      661 tgatagaaaa gataatgatt aatttaggag ttgtttaata ttatacctta gccattttga
      721 gtagtttacc tctcattgta gaatggaaag agtaaaaaac cgtttcctaa tggtatattc
      781 attacactat tttcaaatac gatacaaact aattatatct attacttatc gtatttgtta
      841 cattggatca atttgtaatt attcctagtt cagatgaaaa tctatctgaa attatatact
      901 ttgaacctag aattgtcaaa atcctaaatg gtatgtctat aacttggatg aatagagata
      961 caaaaactca tagattaaca tctggtaatg ctgactcgtt attgccaact gagtttttcc
     1021 atactgatga tattgttggg ggaaaatcaa caacagtcag aattgaaagc aatcaacaag
     1081 caattcctta ctattgttct cttcatcctg ctgaaagagg attaattgta attcttccca
     1141 aaggcgaaga tgaaaagacc aatactcaaa gattaaaatt tttggactca attgctccaa
     1201 cactttttga tactgagaat cgagaaatag taactcgtct ccagagacag gtcgatccag
     1261 cagtattcga atatcttagt aatcctaatg cagttttgtt acagaataaa gtattgacta
     1321 tagtattttg ggatatcagt ggtttttcaa ttttatgtga aaaactaata gatcatccgg
     1381 aattagttgc tgaatttctt agagaatatc ttggtgtcgc aacaaaaata atacatgaac
     1441 atatgggaat agttgataaa tttattggag atggaatact tgcatatttt ggatttaagg
     1501 aaaaagatta tgataataat ggatacacag gagcagaaaa tgcaatactt gctgccctaa
     1561 aattgaaaag accatttgaa aatgtcaaaa ataattggtt acaaatatgg aataaagtca
     1621 ttgactttga tatacatatt gatataaaat gtggtattaa tactggacca gttcttgttg
     1681 gactattacg aagtggagaa agggaccaat ttacagtaat aggaactcat gtaaatttag
     1741 caagtagatt agaaggaaga gctgaagaag gcgaaattat tatctcgaca tttacgatgg
     1801 caaaagttag aggaaaattt aatgtcgaag ctattgatat atctaataat gatgatgaca
     1861 aaataaaatc ttttaaaggt gttgataaat attataaagt attagacata tcttcctcta
     1921 actcttctta aaaattctac tattaaaaat tgaagtatgt tatttttcta taaaaatacc
     1981 atggagaata aatgctaata ctttatttat ccgtacctaa aatttaattc attttattct
     2041 attgtttcaa ttttctaatt caatttacga aatttcgaag taattgtctt acaaacattt
     2101 gagtattttc atctactaaa tttccatttg tatcaaattt attctgtgca aatgtaatta
     2161 ttacttctgg tccgttaata ggatacatat ttagatatac aaatatctgt ctaggatgat
     2221 actgagctct tgcacctcct aacataccaa cagaagcact cattatagca actaagaatc
     2281 tgttctgaga ctgcctgcaa aaccaagaat ttttaactta gtatccatac ctttagagtg
     2341 tcatagtatt actttaaact atcatatttt taatgattat tatacaaaaa ttgtattttt
     2401 ataccatcaa aatcatatgc ataaaatgat gaaaagaatt gattatcctc cttttcaacc
     2461 attttttcat caacatctat tttaaattct aaaagacgat cctttaacaa aaataaatcg
     2521 tttttattat gtaattttat tgcataatga tctaatcctg gcttattatt accatca
//
LOCUS       DATIAS010000497         2559 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1315376, whole genome shotgun sequence.
ACCESSION   DATIAS010000497 DATIAS010000000
VERSION     DATIAS010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1315376"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1219
                     /locus_tag="VLA74_09970"
     CDS             176..1219
                     /locus_tag="VLA74_09970"
                     /inference="COORDINATES: protein motif:HMM:NF019313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase fold protein"
                     /protein_id="HSF51073.1"
                     /translation="MLDSFKGDGTVIDDKNRFYFQADGFLQRSLSKIREKDQEYRIIE
                     FIDDLDRCIPEKALKILESIKSFFDMEGIIFVIALNYQGIDSIIKEKYGNNPNISGFD
                     YMEKIVQLPFNIPEWADMDIDKFIDSIIEKDVNGSIFENEIRLNKRLIAHSVERNPRQ
                     VKRFINDVILTRFVFKKPVDNLIAVKTLKFRQEWEWFSDFIFPDDRREQFFNAYKRLN
                     EDNHALDRWKEKVTKSYPSFFNENDPLRTFLDIGGADKLNSIKSMEEYRRALESVSTF
                     SEYSERLKKLSEDILRLLPEAADTIASMTPLAPFSQLLGKGIKETTDVIKKKQRYKMD
                     NSDPLALNLHAEE"
     gene            complement(1425..1901)
                     /locus_tag="VLA74_09975"
     CDS             complement(1425..1901)
                     /locus_tag="VLA74_09975"
                     /inference="COORDINATES: protein motif:HMM:NF019884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HSF51074.1"
                     /translation="MAILKPKLELYLQQIFRMLLESKTEETIAKELGVSTRSIQRYKV
                     ILDKRYGSIWKQKTNDTLFLECNLFKNRMLKLYKALEDEVTSDKTTAAEKAKCAEVAA
                     NITIDVLKMESEGIKAVKELVAKNTQGKNILDNLNNQSKNDESDNIQKEYDPNKKF"
     gene            complement(1988..2443)
                     /locus_tag="VLA74_09980"
     CDS             complement(1988..2443)
                     /locus_tag="VLA74_09980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51075.1"
                     /translation="MTVKSRLLSDRQKAVVETIRMRLNEKQSLAYLKEMGFEISPKTF
                     YNDKRKVENLKLKRLYHIAQIGFQDQHLERIDNTELCLKLMWENYNKEQDPFKRFQML
                     KDMIMVQPYLSSYYGTTKLIVEKQQEQNEIESNNIFINDEEFKNSNAKF"
BASE COUNT          889 a          366 c          354 g          950 t
ORIGIN      
        1 ctacaacatc aaaatcaagt aatacttcac ctctttttac tagagactcg ttgtaatttc
       61 tccagttcat catataatat gactagaata ggttagctaa atgtgttagg aagaggaaat
      121 tacgcaacaa agtagtataa aagactttgt ttctatcgaa acagatttca gaaatatgtt
      181 agactcattt aagggagatg gtactgttat agatgataaa aatagatttt attttcaggc
      241 agatggattt ttgcaacggt cattatcaaa aataagggag aaggatcagg aatatagaat
      301 aatagaattt atagatgatc tagatagatg tattccagaa aaagcactta agattttaga
      361 atctattaaa agtttttttg atatggaagg aataatattt gtaatagcat taaattatca
      421 aggaatagat tcgataatta aagaaaaata tggaaataat ccaaatatca gtggatttga
      481 ctatatggaa aaaattgttc aattaccttt taacattcca gagtgggcag atatggatat
      541 tgataaattt atagattcta taattgaaaa ggatgttaat ggttcaattt ttgaaaatga
      601 aatacgatta aataagagac ttatagcaca ttccgtagaa agaaatccta gacaagttaa
      661 acgatttatt aacgatgtca tattaacaag atttgtcttt aaaaaaccgg tagataactt
      721 gatagcagta aaaacattaa aatttagaca agaatgggaa tggttttccg attttatttt
      781 tccagacgat agacgggaac aattttttaa tgcttataaa agattaaatg aagataatca
      841 tgcgttagat agatggaaag aaaaggtaac aaagtcttat ccatcatttt tcaatgaaaa
      901 cgatccactt agaacatttc tcgatattgg aggagcagac aagttaaatt ctattaaaag
      961 tatggaagag tatagaagag cattagaatc agtttctaca tttagcgaat atagcgagcg
     1021 gttaaaaaaa ttatctgaag atatattacg tcttcttcct gaagcggctg acactattgc
     1081 atccatgaca cctcttgccc cattcagtca gttacttggt aaaggaatta aagaaactac
     1141 tgatgttata aagaaaaaac aaaggtataa aatggataat tcagatcctc ttgccttaaa
     1201 tttacatgcg gaggaataga acatatattt tataattata tcgataacta atttaatcga
     1261 ttatttacat gtaatagatc acaaatttgg ttccatacaa ttttttaatt ttatcaatta
     1321 ttagtttgat ttcatattca ttaatcttag ttttgaaatg ataaatcctt ttaaaatttt
     1381 tcaaaatata tataataaaa aatattacaa ttttctaaaa taatttaaaa tttcttattt
     1441 ggatcatatt ctttttgaat attatcagat tcatcatttt tagattgatt attaagatta
     1501 tctaaaatat tttttccttg tgtatttttt gctactaact ctttaactgc tttgattcct
     1561 tcactttcca tctttaagac atctatagta atattagccg ctacttctgc acactttgcc
     1621 ttttctgctg ctgtcgtttt atcagaagta acttcatctt ctaatgcctt gtatagtttg
     1681 agcattctat ttttaaacaa attacattct aaaaagagag tatcattagt cttttgtttc
     1741 catatcgatc catatctctt atctaagatc accttatagc gttgaatcga tctcgttgaa
     1801 actcctagtt ctttagcaat agtctcctca gtctttgatt ctaaaagcat cctaaagatt
     1861 tgttgcaaat ataattcgag tttaggtttt aaaattgcca taatactaat ccctatttat
     1921 ttattcagaa atcacgacaa aaccagacaa ataataataa cgataaaatg atagattatt
     1981 attagattca gaattttgca ttactattct tgaactcctc atcatttata aatatattat
     2041 tagattctat ttcattttgt tcttgttgtt tttctacaat taattttgta gtcccataat
     2101 aagaactcaa atatggctgg accattatca tatctttgag catttggaaa cgtttgaaag
     2161 gatcttgctc tttgttataa ttttcccaca tcaactttaa acaaagttca gtattatcaa
     2221 ttctctctag atgttgatct tgaaatccga tttgagcgat atgatacaat ctctttaact
     2281 taaggttctc aacttttctt ttgtcgttat aaaatgtctt tggtgaaatc tcaaaaccca
     2341 tctctttcaa atatgctaaa ctctgttttt catttagtct cattctgata gtttctacta
     2401 ctgccttttg tctgtcactt agcaagcgtg attttacagt cattctgtaa ttattttacc
     2461 tctcttcctc tttttcatta ttgctgatgt tataattttt caagataaaa ttcataactg
     2521 taaaattcat aacgctctta tttctgaatg tttcagcta
//
LOCUS       DATIAS010000498         4630 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1998344, whole genome shotgun sequence.
ACCESSION   DATIAS010000498 DATIAS010000000
VERSION     DATIAS010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4630
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998344"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2684
                     /locus_tag="VLA74_09985"
     CDS             <1..2684
                     /locus_tag="VLA74_09985"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSF51076.1"
                     /translation="NQYFDELAKSKEGTALLTSAEANEVALEDIKWGDGHGVFSHYLL
                     KGLRGKADGYGGGKKDGIISIGELFEYVRDKVKEDTKNLQHPSIGTSPYDRNLPLYVT
                     KYLVDNQIVFSSISFSFDQKRLEHILNLLENGQVEEFNNLRKNDNNQSIFLPKIDLSD
                     KNLVGIDLHEAILQHSIFKKSKMKGANLTGAILTKADLTEADLRSADLTGAKLDGAKL
                     VNVQLRGADLKGMIDFSNADLTGADLRGVDLDGMVNFEGAILHNVNFQGSNIDKVDKV
                     LLRLNGADIRNVKGFPGTSEPINKYSNVLKQFSENISDLFNKYNVSVDNKKIVEESIK
                     QLVKDIDSIQSSDTIKNIEKEKIQIKIKNLIQKIVEVLPLEIQQISESFSILAPLNEF
                     LDKSNNVTINQLVEYETQRLKSVKESEIANKRNNYNLSKIKKMALEMALAPPLEQEKK
                     KNLFSVNLEKMSELYTQSQGKIVLASSEATVDSREKNDYIHDEHDSPHSHGVFSFHLI
                     EGLKGKAADPDTGIITIESLRKYIENQMLVEQKQRPIYAIAEASNFDNIKIAVDQETF
                     ERKIKKLVKEAEEIVERSDRTTGLVNIFALQDAAQKVNKLISLKSDHPEIPRLIDLID
                     KSLEMYKQPTINWLDSNIIVATEKINEIRDNFYNIELPDLVWSLSFNKLVTLSDNYVK
                     ALVYITSHVKKNTQFEKPDDPRLLILTSQLRAVFENERRTKTQEDDLKQFYQDTKHSE
                     IPQLKEKEKRKAIIIGINQYENYEIPTLNGAENDAREIRDKLIQYGNFEISNDHYLVG
                     SHATRRNILRAVSDIFRQDEKCDLVTFYFSGHGVPDLPTSDGYITPYDYDPKDPIISG
                     INMADLKKAIYNAKNIGNTMIILDCCYAGIPTEEYSK"
     gene            3255..3674
                     /locus_tag="VLA74_09990"
     CDS             3255..3674
                     /locus_tag="VLA74_09990"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSF51077.1"
                     /translation="MEELASSGSHSERHLKSLRTSNPSTPGVRWAIIIGISKYKDSRL
                     HLKYAHRDAEEFYNVITKPSGGGFEKEHICKLINEEATRDNINKALCSFLKKPAEDDL
                     VLIYFACHGSYDVDRPHNVYLFLMTQTLMTYLVLLYQ"
     gene            3857..4555
                     /locus_tag="VLA74_09995"
     CDS             3857..4555
                     /locus_tag="VLA74_09995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51078.1"
                     /translation="MLTSAQSNEVALEDEKWGEGHGVFTYYLLEGMRGNADISPQDGI
                     VTVGELFEYVRENVKKATGNQQHPSVGPNVFDENLPMAITAGITAQEYFQLGCLLYEL
                     GIILGDKRRLESANRQFDESIRLAKLDSIPFPEVRFQLGKSLMAINDNITAIKTFEEA
                     IDTCNKSNTMAPSELFIYLGMAYSKTYNYSKAVDSFKGYLHQNPEDENARWLKSHVNK
                     HMSSLCKLSLVILP"
BASE COUNT         1794 a          648 c          782 g         1406 t
ORIGIN      
        1 taaatcaata tttcgatgaa ctagcaaaat ctaaagaagg aacagctctt ctcacttcag
       61 cagaagcaaa tgaagtggct ttagaagata taaaatgggg ggatggtcat ggtgttttta
      121 gtcactattt actgaaaggt ctacgtggaa aagcagatgg atatggagga ggtaaaaaag
      181 atggtattat ctccattgga gaactctttg agtatgttcg agataaagta aaagaagata
      241 caaaaaattt acaacatcca tctattggta catcccctta tgatagaaac ttacctttgt
      301 acgttacaaa atatctagtt gataatcaaa tagttttctc ctctatttcc ttttcttttg
      361 atcaaaaaag attagaacat atacttaact tacttgaaaa tggtcaagta gaggaattta
      421 acaatttacg aaaaaatgat aataatcagt caatatttct tccaaaaata gatttaagtg
      481 acaaaaatct agtcggaata gatctgcatg aagctatcct tcaacattct atatttaaaa
      541 aatcaaagat gaaaggtgcc aatttaactg gagcgatact tactaaagct gaccttacag
      601 aagctgattt aagatcagca gatctcacag gtgctaaact agatggagct aaattggtca
      661 atgttcagtt acgaggcgct gacttgaaag gaatgataga tttttctaat gccgatctca
      721 caggagcaga tctccgagga gttgatttag acggaatggt gaactttgaa ggagccattc
      781 ttcataatgt aaattttcaa ggttctaata ttgataaagt tgataaagtc ttattaagat
      841 taaatggtgc agacataaga aatgtaaaag gttttccagg cacatcagaa ccaatcaata
      901 aatattcaaa tgtattaaaa caattttctg aaaatataag tgaccttttt aacaaatata
      961 atgtttctgt agataataaa aaaatagtag aagaatcaat taaacaattg gtaaaagata
     1021 tagactcaat acaatcctca gacactataa aaaatattga aaaagaaaag atacagatta
     1081 aaattaaaaa tttaatacaa aagatagtag aggttttgcc tttggaaata caacaaattt
     1141 ctgaatcatt ttcaattctc gctccattaa atgaattttt agataaatca aataatgtaa
     1201 ccattaatca gctagtagag tatgaaactc aaaggttaaa gtcagtcaaa gaatctgaaa
     1261 ttgcgaataa aaggaataac tataatttgt ctaaaataaa gaagatggca ttggagatgg
     1321 cattggcacc tcctctggag caggaaaaga aaaagaatct cttttcagtc aatttggaaa
     1381 aaatgagtga attatatacc caaagccaag gtaagattgt tttagcatca agtgaagcaa
     1441 ctgtagattc aagagaaaaa aatgattata tacatgatga acatgattct ccacatagcc
     1501 atggtgtatt ttcttttcac ctaatagaag gattaaaagg aaaagcagca gatcctgata
     1561 ctggaattat aactatagaa agtcttagaa aatatattga aaaccaaatg ttagtcgaac
     1621 agaaacaaag gccaatatat gctattgctg aagcatcaaa ctttgacaat ataaaaattg
     1681 cagtagacca agaaacattt gaaaggaaaa taaaaaaatt agtcaaggaa gcagaggaaa
     1741 tagttgaaag gtcagatcgg acaactggtc ttgtaaatat ctttgcatta caggatgcag
     1801 ctcaaaaagt aaataaatta attagtttaa agagtgatca tccagagata cctagactta
     1861 tagatttaat agataaatca ttggaaatgt acaaacagcc tactattaac tggttagata
     1921 gtaacatcat agtggctaca gaaaagatta atgaaattcg tgataatttc tataatattg
     1981 aattacctga tttagtttgg agcttatcct ttaacaaatt agttactctt tcagataatt
     2041 atgttaaagc tttagtttat ataacctcac atgttaaaaa aaatactcaa tttgaaaaac
     2101 cagacgatcc aaggttatta atattaacta gtcaacttag agcagtattt gagaatgaaa
     2161 gaagaaccaa gacccaagaa gacgacttaa aacaatttta tcaagataca aagcattcag
     2221 aaattccaca actaaaggaa aaagaaaaac gtaaagcaat aattataggc attaatcaat
     2281 atgaaaatta tgaaattccg acattaaatg gtgcagagaa tgatgcaaga gaaatacgtg
     2341 ataagcttat acaatatggt aattttgaga tttcgaatga tcattattta gtaggatctc
     2401 atgcaactcg aagaaatatt ttaagagccg ttagtgatat ctttcgacaa gacgaaaagt
     2461 gtgatcttgt tactttttat ttttctggac atggtgttcc agatttacca actagtgatg
     2521 gatatattac accttatgat tatgatccaa aagatccaat tatttcgggt ataaatatgg
     2581 cagacttaaa aaaagccata tataatgcta aaaatatagg aaatacaatg attattcttg
     2641 attgttgtta tgcaggaatc ccaacagaag aatattcaaa ataattgagt ataccttggt
     2701 ctattttaga ttgcaaatct cctcattgta tacttgcgtg gaaaaattag aaaagtcatg
     2761 ttagcttaga tttaatttta gaaaataata atcattattt gctatgtatg tatttccaat
     2821 atcaaagagt aaagattatt tctaagttag tcataaaatt catcaatgaa tccgtcaaaa
     2881 aaacggattc gaagccagca ttctaatccc gcctccagca aaacagaatg ttactaacct
     2941 atcaagattc gtattcatat aaactttcat ttatttaatt atcgttatta tcataatata
     3001 gaataacaaa tgattaattt tgttgtgtat caataataag gtaaatttct tttaaaaatg
     3061 tgtaatttct attttgatag aaaatgagta tggaataaaa gttcacagaa tacaatataa
     3121 taacaaagta tggacaagaa ttctgtaata aacattgaaa tactagaaca gaatcatcaa
     3181 aaacaattat taaatttatg cattatcaaa gattaaaata acttaatatt attaatattc
     3241 tatttattta ggtcttggaa gaattagcat catcaggaag tcattctgaa agacacctta
     3301 aaagtttgag aacttctaat ccttcaactc ctggagtccg atgggctata ataataggaa
     3361 tttcaaaata taaagacagt aggcttcatt taaaatatgc tcatcgcgat gctgaagaat
     3421 tctataacgt aataacaaaa ccgtcaggag gtggatttga aaaagaacac atttgtaaat
     3481 taataaatga agaagcaacc agagacaata taaacaaagc cttgtgttct tttttaaaaa
     3541 agccagcaga agatgattta gttttgatat actttgcctg tcatggttct tatgatgtag
     3601 acagaccaca caatgtttat ctcttcctta tgacacagac cctgatgaca tatctggtac
     3661 tgctgtacca atgagagaaa tagatgcttc tcttagcgat aatttacttt cagaaaaagt
     3721 tgtaattata gcagatgcat gtcatagtgc ataaataggc aaagggatag gaggaagaag
     3781 aagtactaat attaatagca caaaattagt caatcgctat ctagaaaacg ttagcaaagc
     3841 aagaggtggg attgcattgc ttacttcagc tcaatcaaac gaagttgctt tagaagatga
     3901 aaaatgggga gaaggtcatg gagtctttac ctattatttg ctagaaggaa tgcgtggaaa
     3961 tgctgatata tctccacaag atggaatcgt tactgttgga gagctgtttg aatatgttcg
     4021 tgaaaatgtc aaaaaagcta ctggcaacca acaacatcca tctgtcggac caaatgtttt
     4081 tgatgaaaat ttgcccatgg ctattacagc tggtattact gcacaagaat actttcagct
     4141 tggatgtctc ttatacgaat taggtattat cttaggtgat aaacgaagat tagaatctgc
     4201 aaatagacaa tttgatgaat caattcgact tgctaaactg gactctattc ctttcccaga
     4261 agttagattt caacttggaa agtcattaat ggctattaat gataatatta cagctataaa
     4321 gacttttgaa gaagcaatag acacatgtaa taaaagcaat acaatggctc cttctgagtt
     4381 atttatttat cttggaatgg cttattctaa gacatataat tattctaaag cagtggattc
     4441 ttttaaaggg tatttgcacc aaaatccaga agatgaaaat gcacgatggc ttaagagtca
     4501 tgtgaacaaa cacatgagtt cattatgtaa actatctcta gttatattgc catgatgaga
     4561 gttattgtag ttacatgtcc aatcagatac tgcttttcca atatcagatt catttctaaa
     4621 tgtagagttg
//
LOCUS       DATIAS010000499         2088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1724018, whole genome shotgun sequence.
ACCESSION   DATIAS010000499 DATIAS010000000
VERSION     DATIAS010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1724018"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VLA74_10000"
     CDS             <1..462
                     /locus_tag="VLA74_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51079.1"
                     /translation="ESHQVTVLLPPREDKAVYSGLLTFIASKPVEAVTLHYYDTEGMD
                     IPQEVLDQYGWVMNAPAPWSEGDSVATAMMALPYEENTPTFSNNVPFVGNALGLHTTN
                     GEPFMATYTVKATVLEPEIKNNLDSLKKVVGASEKTNSTVSDDSSNDEDGE"
     gene            539..1261
                     /locus_tag="VLA74_10005"
     CDS             539..1261
                     /locus_tag="VLA74_10005"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSF51080.1"
                     /translation="MEKSLIIPILLLLGVLSLSLLLFPSNYNSFYVNAQEKKEMRDDE
                     LKLSINNIIINNSNSPTLGNPNAPITIIDFSDFQCSMCARYVKTTEPIINETYIQTGK
                     AKLVFKHFPIRGFDSVGASMAAQCINDQGQSKFWKFHNLLYHNQGVIDSGWVSKENLK
                     NFASQISRLDMDKFVECLDSEKYKEYVQNDLELAKKFKFTESPSFIILNKDGTDPEYL
                     SGAHPFPSFASIIDKKLERLNK"
     gene            1269..1757
                     /locus_tag="VLA74_10010"
     CDS             1269..1757
                     /locus_tag="VLA74_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51081.1"
                     /translation="MNLIPFSFRIVFSKLLYILIAITIAVGFWILLNTFDKLLFFSPV
                     WTFYLPEDAIPGFILTNISSILLGILISMNIYVIKDAKLKISNKSSLLSGTTLGILSS
                     TCASCSSVGFAIISTLGGTGIAISNFLEVYAIPLRVVSILILVCALYLIHNKLTKSCV
                     IK"
BASE COUNT          762 a          293 c          313 g          720 t
ORIGIN      
        1 gaatctcatc aagttacggt attgcttcca cctagagaag ataaagccgt atattcagga
       61 ctactgactt ttattgcaag caaaccagtt gaagcagtga cattacatta ttatgataca
      121 gaaggtatgg atattccaca agaagtttta gatcagtatg gttgggttat gaatgcacca
      181 gctccatgga gtgaaggaga ttcagttgca acagctatga tggcgttacc atacgaagag
      241 aatacaccta cattttccaa caatgtacca ttcgtaggta atgcattagg attacatacg
      301 acaaatggag aaccattcat ggcaacatat acggttaaag caacggtact agaacctgag
      361 attaagaata atttagacag cttgaagaag gtagttggag cttcagaaaa aacaaattca
      421 acagtttcag atgatagtag taatgatgaa gatggagaat aaaataaact aatctatatg
      481 tctagatagc taaatatttt atctttttat tttttacggt aaagatctga ttgaaaaaat
      541 ggaaaaatca ttgataattc ctattttact actactggga gttttatcat tatcattatt
      601 attatttcct tcaaattaca attcctttta tgtaaatgca caagaaaaaa aggaaatgcg
      661 tgatgacgaa ttaaaattat caattaataa tattattatt aacaatagta actctcctac
      721 tcttggcaat ccaaatgctc caataacaat aattgatttc agtgattttc aatgctcaat
      781 gtgtgctaga tatgtaaaaa caaccgaacc aataataaat gagacttata ttcaaacagg
      841 taaagcaaaa ctagtcttta aacattttcc aatacgtgga tttgactcgg tgggagcttc
      901 aatggcagca caatgtataa atgatcaagg tcaaagcaaa ttctggaaat ttcacaatct
      961 tttatatcat aatcaaggtg tgattgattc tggttgggta agtaaagaaa acctaaagaa
     1021 ttttgcatca cagatatctc gattggatat ggacaagttt gttgaatgtc tagatagcga
     1081 aaaatacaaa gaatatgttc aaaatgatct agaattagct aaaaaattta aatttaccga
     1141 aagtccatca tttattatcc taaacaagga tggaacagat cctgaatatc tttctggagc
     1201 tcatcctttc ccttcctttg cttcaattat tgataaaaaa ctggaaaggt taaataaata
     1261 aaatagtaat gaacctaatc cctttttctt tcaggattgt cttttcgaaa ttattataca
     1321 tattaatcgc aataacaata gctgttggat tttggatatt attaaataca tttgataaac
     1381 tacttttctt ttctccagta tggacatttt atcttccaga agatgctatt ccaggtttta
     1441 tcttgacgaa tatatcttca atattgttgg gaattctcat aagtatgaat atctatgtaa
     1501 taaaggatgc aaaactaaag ataagcaata aatcttcctt attatctgga actacattag
     1561 gaattttatc aagtacttgt gccagttgtt catcagtagg atttgcaata atttcaacat
     1621 taggaggaac cggtattgca atatctaatt tcttggaagt atatgcaatt cctttacgag
     1681 tagtatctat tctaatactt gtctgtgcat tatatttaat acataataag cttacaaaaa
     1741 gttgtgtaat aaaataaatt ttcattcaaa agaagaaact atttgagata atacaatatt
     1801 ttaaaaataa gtacaacact ttagcaacaa tatgcttgca attattttgt ctcaaattaa
     1861 aatcatggaa ggtacatgtt ttattttctg tatctacttc tatttgcaaa tgagttttta
     1921 gtgataaata tttacaaaaa attaataatt acatatttgt caattattga aattctagtt
     1981 agagattaaa attattatat tggttttcat ttattgtcct aataaattga aatactattt
     2041 ttctaattat aactttttaa tttttaactt tttttaacaa cattagtt
//
LOCUS       DATIAS010000500         2569 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_635492, whole genome shotgun sequence.
ACCESSION   DATIAS010000500 DATIAS010000000
VERSION     DATIAS010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_635492"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..1651
                     /locus_tag="VLA74_10015"
     CDS             215..1651
                     /locus_tag="VLA74_10015"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSF51082.1"
                     /translation="MTITITNNDDKQPQKNLLLQYVKSVSMMKKRTANEYYDRLVKFE
                     RFILSHYFINLDKFIEELREGGKANFNVYDILRNYSIYLMQDPNNTIQTTTLKQRVVT
                     AKNFLEFYDIDISPRKFKIKVRLPKDIKRIKEAIDKNDIVNILNGCSDLRLKTYVMLL
                     ASTGCRATEALSIRNRDLDLDSIPAKVTIRGEYTKTKVDRYVFLTKEMVSQLKKWLDY
                     KYRTRRVCSKDKETGKLIDEYRTPNKSLNDLVFLVQSNNNPSNKNTATTNRSPRVPRS
                     IPHNTYYHIVRRFSNTLDRIGMGSREESNERRRKITLHSFRRFVKTTISDLGYADYSE
                     WFIGHSGSTYWRKKDSEKAEIFKKIEPYLTFLNVPQLERQGADLQTKIEELQDINQLL
                     RNKQNEKEEQIKKLEESVAFLADRFNAFLTSQPENKLVYYEDDDKKGTAGDGRRLKGI
                     ALKEEINNRAIGTVIPSTFTKSRSNKKS"
     gene            2326..>2569
                     /locus_tag="VLA74_10020"
     CDS             2326..>2569
                     /locus_tag="VLA74_10020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51083.1"
                     /translation="MRQLWDTKKGYYHHGTIKNPEKLKSSGIKRLMEDALWTQGIRKK
                     SNLKRNRYEFQSDHGFRKWFKTRCEISGMKSINIEIL"
BASE COUNT         1060 a          327 c          409 g          773 t
ORIGIN      
        1 atgtatacgt atacgaatga taatatatta tctataaaat aaaaagatca caaatagatc
       61 taaacaccaa gtaagaatat tttatataca ctaaatacat aaagtaaaac gatatatact
      121 aataatcttg cataatcaat attcaaattg tttatgcata aagaataaca aatacaaaat
      181 gttaataaga tatgagaaat aatataatag atgattgact attacaataa ctaataatga
      241 tgataaacag ccacaaaaaa atttgttact tcaatatgta aaaagcgtta gtatgatgaa
      301 gaagcgaaca gcaaatgaat attatgatag attagtaaaa tttgaaaggt ttatcttatc
      361 tcattatttt attaatcttg ataaatttat tgaagaatta agggaaggag gaaaagcaaa
      421 tttcaatgta tatgatattt tgagaaatta cagcatttat ttaatgcaag atccaaataa
      481 tactattcag acaactactc ttaaacaacg tgttgtaact gctaaaaact tccttgaatt
      541 ctatgatatt gatataagtc ctagaaaatt caagattaaa gtcagactac caaaagatat
      601 taaaagaatt aaggaagcaa tagacaaaaa tgacattgtt aatattttaa acggttgttc
      661 tgatttaaga ctaaaaactt atgtaatgtt gttagcctcg acaggttgca gggcaactga
      721 agccttgtca attcgtaatc gtgacttgga tctcgattca attccagcaa aagttactat
      781 aagaggtgaa tatacaaaaa ctaaagttga tagatatgta tttctaacaa aggaaatggt
      841 gtcccaatta aagaaatggt tagattacaa gtatcgtact cgcagagttt gtagtaaaga
      901 taaagaaact ggaaaattaa ttgatgaata taggactcct aacaaaagtc ttaatgattt
      961 agtattttta gtacaaagca ataataatcc ttctaataaa aatactgcaa ctactaatag
     1021 atcaccaaga gttcctagat caatacctca taacacttat tatcacatag taagacgttt
     1081 ctctaatact ctagacagaa taggaatggg ttctagagaa gaatctaatg agcgtagacg
     1141 aaaaataact ctacattcat tcagaaggtt cgtaaaaact acaatatctg atctgggtta
     1201 tgctgattat tctgagtggt ttattggtca ttctggctca acatactggc gaaaaaaaga
     1261 tagtgaaaaa gcagaaatat tcaagaaaat tgaaccgtat ttgacttttc taaatgttcc
     1321 tcagttggaa agacagggag cagacttgca aacaaaaata gaagagttac aggacataaa
     1381 tcaattatta agaaacaagc aaaatgaaaa agaagaacag attaaaaagt tagaagaatc
     1441 agttgcattt ttagccgata gattcaatgc atttctaaca agtcaacctg agaataaact
     1501 cgtttactat gaggatgatg ataaaaaagg tactgctggt gatggaagaa gattaaaagg
     1561 gattgcctta aaagaagaaa taaacaatag agcaattgga acagtaattc cttctacgtt
     1621 tactaagagc agaagcaata agaaaagtta attttttaaa aatctcattg ataatatttg
     1681 tgcttgtttt ttatttaggt aagcattatc taaacttttt ctactggtca taacaaacac
     1741 acgatattct caaagaaccg atagttttct caaaaagata tatgagagaa attttaccgt
     1801 cagagtcaaa acaacaatca aagatcagag atcaaagcaa aaaggatttt gcgctgctgg
     1861 cggcgtaaat tagtgaatta gaagaattca gacaaaagaa aggtaaagtc gtctcagaac
     1921 ctagtgaagg tgatattgat gattctactt ttgcaatgcc acaagaacat tatagatcag
     1981 tcgaagatct agaagaaatt acaaaagatt ctcataaaat ctataccatt tagcacatat
     2041 tttctaatca aatcgctttt ggaatactaa gtgatttaac attactatta ttaaacacga
     2101 tagcaaatat tttttcctga ttatatgata ttataagtaa ataggattag aaaatatagg
     2161 ctaattggta tatgataatc ttgaatgaat tataaaataa tatgaaaaat aacttaagga
     2221 acttggaagc aaaatagcaa tttctttttt gttgttgtat gctttaagta gttacaaagt
     2281 ttttgttcta cttctaaaat atatattctc ttcttcataa tcgtaatgag acagttatgg
     2341 gatacaaaaa aaggttatta tcatcatgga actataaaaa atccagaaaa actcaaatct
     2401 tctggcatta agcgattgat ggaagatgct ctatggacgc aaggtattag aaaaaaatct
     2461 aacttaaaaa gaaatagata tgaatttcaa tcagaccatg gatttagaaa atggtttaaa
     2521 actagatgcg aaatctctgg aatgaaaagc attaacatag aaatattga
//
LOCUS       DATIAS010000501         2020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_499500, whole genome shotgun sequence.
ACCESSION   DATIAS010000501 DATIAS010000000
VERSION     DATIAS010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499500"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..330
                     /locus_tag="VLA74_10025"
     CDS             118..330
                     /locus_tag="VLA74_10025"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51084.1"
                     /translation="MIFYFLNPQIDYIYQYSKSIRIDNQIFATLSNPTDIAADSAGNV
                     YVIDHGDETVQKFTTDVTFVKEWNIN"
     gene            complement(669..1331)
                     /locus_tag="VLA74_10030"
     CDS             complement(669..1331)
                     /locus_tag="VLA74_10030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51085.1"
                     /translation="MQSSKYYDTVFHLKKEFTKSSLVLYLSFILVTWSLLQISLTNFF
                     ENNDNILMKIPSIYAQDDDGGNGNGEVSDDNGDSDVEELSLDKEETQDEDVGQDVPEE
                     LTLEDGQHKYVDVPRFVGGDPSGTDITSQLPSVDPQPLPIGLPPLPGGPLPPGGLPPL
                     PGSPLPPGSPIPPGGGPTPPVDLPLAGGLPPDDGHHEDDENEEEDDNEDKDEDNDDKD
                     NS"
     gene            complement(1620..>2020)
                     /locus_tag="VLA74_10035"
     CDS             complement(1620..>2020)
                     /locus_tag="VLA74_10035"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSF51086.1"
                     /translation="ANDDVNLSVEKGEGEGGGRKEIKIKKGQKIILFLGSANHDESVF
                     TDPERFDIIRKNLRHMAFGTGIHFCLGAPLARLEGQIALRILLERLDNVQFDFDYSDR
                     QDLYTKVTPLKSSLFLGLSHLPIRFETKNR"
BASE COUNT          665 a          318 c          310 g          727 t
ORIGIN      
        1 tataattttt cttgtaacta attcaataga tgttatttaa ttgaaaaaaa atcaacaact
       61 agcaaaaaaa atatcttcag ttttttacca ataatattaa taggattgat tactttaatg
      121 attttttatt ttttaaatcc acaaatagat tatatttatc aatattctaa atcaattaga
      181 atagataatc aaatctttgc aaccctttca aatcctacag atatagcagc tgatagtgca
      241 ggaaatgttt atgttattga tcatggagat gagacagtac aaaagtttac aactgatgtt
      301 acatttgtta aagaatggaa tatcaattag aaaatatatt atcctcttat gaaggcgtca
      361 ttaagcccag tcaccagatc ctcatggatt tggtcgtgat gaagatggca taggttgtga
      421 attctaatta atgacaaaga attaacagca caatacaata atatcctatt aaatataact
      481 taatgttttt tataagtatt aaataggcta tatttttgat agccaatctt aaaatataaa
      541 aaagaaatat aattctaaat tggtagtagt catagttgat gactttttcc tttcagattc
      601 ccaaatagca aaagaagaaa aagattgact atattctcaa caaatgattg aagcagtgaa
      661 aaggattact aactgttgtc tttgtcatca ttgtcttcat ctttatcttc attatcatct
      721 tcttcttcat tctcatcatc ctcatggtgg ccatcatctg gtggtaggcc tccagctagt
      781 ggtagatcta caggtggtgt agggcctcct ccaggtggta ttggactgcc aggtggtaat
      841 gggcttccag gtagtggtgg taggcctcct ggtggtagtg gacctccagg tagtggtggt
      901 aagcctatag gtagtggttg tgggtctaca gatggtaatt gtgaagtaat gtccgtacca
      961 gaaggatcac cgccaacaaa tctaggaaca tctacatatt tgtgttggcc atcttctaga
     1021 gttagttctt caggaacatc ttgtccaaca tcttcatctt gagtctcttc tttatctaga
     1081 cttagttctt ctacatcact gtccccattg tcatcagaga cttcgccatt accgtttcca
     1141 ccatcatcat cttgggcata aattgaaggt attttcataa ggatattatc attattttca
     1201 aaaaagttag ttaatgatat ctgaagtaaa gaccatgtaa ctaaaataaa actaagatat
     1261 aaaactaaac tggatttagt aaattctttt tttaagtgaa acacggtatc ataatatttt
     1321 gatgattgca taaaaagttt ttttaaataa aaggaaagtt aaataaatta tattatatca
     1381 tttgcttttt tttctaactg ttgttgtgta tattttcttt catttaaaac taataactga
     1441 tcagataaat gagccaagcc aaagcatcat cttcatttac ctagagtcta tatttacaag
     1501 aagatccata accgtgtcaa ttgataaaga tttgacaaat tggtaacgtt tttgtttaat
     1561 tatatataag attatctatt atcttttggt ttgattagtt atagtgtgaa ctttatttat
     1621 taccgattct tagtttcgaa acgtattggc aagtgtgata atccaaggaa aagagaactt
     1681 ttgagtggag taacttttgt atatagatct tgtctatcac tataatcaaa atcaaattga
     1741 acattatcca atctttcaag aagtattctt aatgctattt gtccttcaag tctagctaaa
     1801 ggagctccta aacaaaaatg aattccagtt ccaaaagcca tatgacgtaa gtttttacga
     1861 ataatatcaa atctttcagg atctgtaaat actgattcat catggttggc agaacccaaa
     1921 aataatatta tcttttgacc tttctttatc tttatttctt ttcttcctcc accttctcct
     1981 tctccttttt ctacagataa atttacatca tcatttgcaa
//
LOCUS       DATIAS010000502         2369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_771473, whole genome shotgun sequence.
ACCESSION   DATIAS010000502 DATIAS010000000
VERSION     DATIAS010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771473"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..932)
                     /locus_tag="VLA74_10040"
     CDS             complement(189..932)
                     /locus_tag="VLA74_10040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51087.1"
                     /translation="MTHDLLIRGFDDEIHSQLGELAKEKGVSINSIVKDAVDKWLKQQ
                     SDIPKKHYLLIYSDDDEDSILGLLKSMDRLAKESDLFRCFCGPPSTITTKLLSKLNWY
                     DGTIMPYCYNETTKNIKGQKQNQQSQSQSQSQNNNNNKNIVRYCNIVMENIAKNANNK
                     QVCCIDFLINDIAKSSLHQALTIEKAYDNSRIPGIMYCTYKTETLLNAEIKDLVELFE
                     GHDQIFILKQDEVYKLHITKENVHKLFLN"
     gene            1043..1297
                     /locus_tag="VLA74_10045"
     CDS             1043..1297
                     /locus_tag="VLA74_10045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51088.1"
                     /translation="MNQINKQQQEEKKQIVNGVNVSKLFETVEVIKEKPDIVKFNLKA
                     KGKWIKGGHNSTTINEFMLHVRISKEVNHLSLKKMNHQYY"
     gene            1402..1866
                     /locus_tag="VLA74_10050"
     CDS             1402..1866
                     /locus_tag="VLA74_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51089.1"
                     /translation="MQRQKNNNKNRTSKEIFSLRETISTKKKPSYRILFVDDDHDILF
                     TIKKSLEHHGFIVDTFSNPLEALSSFKPELYDLVLIDIKMPEMSGFEFHQELQKKTTY
                     GTEIKICFITAFEIYFETLRKEFPELYGGCFIRKPIKTEDLINKINEELKQN"
     gene            complement(2084..>2369)
                     /locus_tag="VLA74_10055"
     CDS             complement(2084..>2369)
                     /locus_tag="VLA74_10055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51090.1"
                     /translation="PVFIVNDANNNQNIWGPGIIFARRVMDIGDNNHILIDGGLAHSL
                     ITLDDKYKEIIHYVGDYQIKHGQIIKLYSAYKENYFGNKDIPVKMKCLPI"
BASE COUNT          864 a          320 c          316 g          869 t
ORIGIN      
        1 gaattaatgt tattcagtat agtatacatt cgcaattatc catttttttt ggaaaaataa
       61 attatatatt cttctactga ctgtgtttgt ttaagaacga aggcttaagc atttatttaa
      121 atatagttgg gatctaagga tctatctatc ttagtctact ttaaaaaaaa tattatttgt
      181 aaaaactatt aatttaagaa aagtttatgt acattttcct ttgtgatatg aagtttatag
      241 acttcatctt gtttcaatat aaaaatttgg tcatgtcctt caaacaattc tacaaggtct
      301 tttatctctg catttagcaa ggtttcagtc ttgtatgtac aatacataat tccaggaatt
      361 ctgctgttat cataagcttt ttcaattgtt agagcttggt gtaatgaaga ttttgctata
      421 tcatttataa gaaaatcaat gcagcaaact tgtttattat tggcattctt tgctatattt
      481 tccataacta tgttacaata tctcacaata ttcttattat tattattatt ttgactttga
      541 ctttgacttt gactctgctg attttgtttt tgtcctttaa tatttttagt tgtttcatta
      601 taacaataag gcattattgt tccatcatac caattgagtt tagataatag tttagtagta
      661 atagtagaag gtggaccaca aaaacatcta aataaatcac tctcttttgc aagtctatcc
      721 atagacttta gtaaccctaa tatggaatct tcatcatcat cagaataaat taaaagataa
      781 tgtttttttg gaatatctga ttgttgcttt agccatttgt caactgcatc ctttacaatt
      841 gaatttattg atactccttt ctctttagct aactctccta attgtgaatg gatttcatca
      901 tcaaatcctc taattagtaa atcatgtgtc atttcttttc tatcaatcta atataatatc
      961 taaaagatat atatgtttta ttattttgat atcatgctat ctttttcata acattcatat
     1021 gatgatatca tgatatcatc atatgaatca aataaataaa caacaacaag aagaaaaaaa
     1081 acaaattgta aatggagtca atgtatcaaa gctctttgag acagttgaag taattaagga
     1141 aaaacctgat attgttaaat ttaatttgaa agcaaaaggt aaatggataa agggtggaca
     1201 taatagtaca actattaacg agtttatgtt gcatgtcaga atttcaaaag aagtcaatca
     1261 tttatctttg aaaaagatga accaccagta ttattaggag aagatcatag tgcaaatcgt
     1321 tgaatatgta tttgcagcac ttgatggttg cttaacaaca agtcttattt atcatgctgc
     1381 agcagaagga gtataagaca attgcaaaga cagaaaaaca ataataagaa tagaacttct
     1441 aaagaaattt tttcactgag agaaacgata tctacaaaga agaagccttc ttatcgaatt
     1501 ctgtttgtcg atgatgatca cgatattcta tttactatca aaaaaagttt ggaacatcat
     1561 ggttttatag tcgatacatt ttcaaatccc ttggaagcat tatcctcttt taaaccagaa
     1621 ttatatgatt tagtcttaat tgatattaaa atgcctgaga tgagtggctt tgaatttcat
     1681 caagaattac aaaaaaaaac aacttatgga actgaaataa agatctgttt tattactgca
     1741 tttgaaatat attttgagac attaaggaaa gaatttccag aattatatgg aggatgtttt
     1801 atacgcaaac caattaaaac agaagatttg ataaacaaga taaacgaaga attaaagcaa
     1861 aattagaata taggataagc ctcgaataaa ttacaaattt atctatcata tttctatttc
     1921 atttccataa ccaatataga aaactataag atcgaattag aggattcatc ataaggctaa
     1981 ttgacttaat atgttaagca attgtaatag aatttataaa tgttcaaaat agcaatttct
     2041 aaaaaaattt atagagataa cctagtaaat aaatttaaaa tacttaaatt ggtaaacatt
     2101 tcatttttac gggaatatct ttatttccaa aataattttc cttataggca gaatataatt
     2161 ttattatttg accatgttta atttgataat caccaacata atggataatt tctttgtatt
     2221 tatcatctaa tgttatcaaa gagtgcgcca agcctccatc aattaagatg tggttattat
     2281 ctcctatatc cattactctt cttgcaaaaa taattccagg tccccaaata ttttgattat
     2341 tattggcatc attaactata aaaacagga
//
LOCUS       DATIAS010000503         5986 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_227666, whole genome shotgun sequence.
ACCESSION   DATIAS010000503 DATIAS010000000
VERSION     DATIAS010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5986
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227666"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..129)
                     /locus_tag="VLA74_10060"
     CDS             complement(<1..129)
                     /locus_tag="VLA74_10060"
                     /inference="COORDINATES: protein motif:HMM:NF045191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51091.1"
                     /translation="MVFDSLTEYLQDLETSGRLHRVKTQVDTNLEIAEIMRRLIYSG"
     gene            complement(609..1274)
                     /locus_tag="VLA74_10065"
     CDS             complement(609..1274)
                     /locus_tag="VLA74_10065"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSF51092.1"
                     /translation="MTPLTCKIRTSYFKKAQINKILKIISNNLFLLYLSKEEIIKKIV
                     PNLVDIDYYSLTPTDFKLSSILIIIHFTDSTPKIILTKRSSNLKYHRDEISFPGGKFQ
                     ITDSSLLHTALRETKEEIGLYFTPAQIKGSLKAVRTLTSNFTIIPYITFQERIHKPKI
                     LSDEVSSILNIEIFDLFESLSNNFSYKNFSNSFVFKYDNEIIWGATARILKQLRDCFY
                     CAN"
     gene            1333..2100
                     /locus_tag="VLA74_10070"
     CDS             1333..2100
                     /locus_tag="VLA74_10070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51093.1"
                     /translation="MIIHYELNPPKILPGECFDRDRLFEDIENIKGKISLLEKYVDGI
                     HFTDSVLGIPRLSSISMADIIKRSTKNPLKISCSVRTRDRNFTAMYQIVTDSILSEID
                     SLLILLGDEPIKGPKNNNPVKPSAFVSELNKQGFNKIVKLNLSIPNKITNSTNIQKKI
                     EAKPYAFVTQSIESLNDLEKIVDTVKPFKIRVVACIMLPSEKNRKSADAIGLDWKEYE
                     KAPIDFITNAGKLADEILLTSPNHFALAGDVLSKIRC"
     gene            complement(2097..2882)
                     /locus_tag="VLA74_10075"
     CDS             complement(2097..2882)
                     /locus_tag="VLA74_10075"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSF51094.1"
                     /translation="MVKLEIKNVTKSFTRNEGKLSTKINAVENINLSVKDGEFVCLVG
                     PSGCGKSTLLNILAGLDKPTQGQVILNGRQITETGPDRIIVFQENALFPWLKVIDNVE
                     FGLKMAKVEKVKRREIAMQYLDMMQLSKYADAYVYQLSGGMKQRVAIARSLVLDPEVL
                     LMDEPFAALDSQTRDLLLVELQLIWAKTNKTIIFVTHNITESICLGDRVVVFTSRPGK
                     IKKDIKIDYRRPRLTEDDGLKEYQRQVLYELKSEMIHSKKQHS"
     gene            complement(3211..4413)
                     /locus_tag="VLA74_10080"
     CDS             complement(3211..4413)
                     /locus_tag="VLA74_10080"
                     /EC_number="2.1.1.213"
                     /inference="COORDINATES: protein motif:HMM:TIGR00308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanine(10)-N(2))-dimethyltransferase"
                     /protein_id="HSF51095.1"
                     /translation="MDTAITTTLKLIKEGNTNLLVPKSSLEDKVPPHYPAFFNPLAEL
                     NRDISIYLYNAFLEDNHNNGEITFADAFAGIGPRGLRVAVEVPKVSRVFINDVNELAI
                     DIAKESAALNSILDKCFFSRSEVCKFLISRHSSLHNDRFSIIDLDPFGSPAPFIDCVL
                     RSIENGGLISVTATDTAVLSGIYQNVCLRKYSGISINNTYSNEVATRLLLSSIALQAA
                     RLGITVLPVFAHSNRHYFRIFLQLFFSKNQANDVFSNIGYIQHCFKCGDRNTFESSRS
                     TTDKCQICNVKTSVAGQLWIGKLYDKKILSKINEIYLDQDYSKTNRLFRQIKKIFTTS
                     FQELDDIPYYFSLDEIGSMLRTSPIKLMELIEKLSLSGFNASRTIFRPTGFKTNASIH
                     EILSLLKN"
     gene            4530..5195
                     /gene="rnhB"
                     /locus_tag="VLA74_10085"
     CDS             4530..5195
                     /gene="rnhB"
                     /locus_tag="VLA74_10085"
                     /inference="COORDINATES: protein motif:HMM:TIGR00729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HSF51096.1"
                     /translation="MLLCGVDEAGRGSVIGPLVVAGIMIKKSKVKNLAEIGVRDSKKL
                     TREKRNTLFYEILDIAEFTCVYKIGPKEIDESVHRNNLNKLEGRVMANILNHLEGDIA
                     YIDSCDVNIKRYTTLLRSHLNPYNSNVKIFAMHKADILNIAVSAASIIAKVIRDKEIE
                     NLQGQFHNINIGSGYPADRRTMEFINNLIEEKNNFPDFIRRSWSPVKNMLEKKQKKIY
                     DFF"
     gene            complement(5180..5935)
                     /locus_tag="VLA74_10090"
     CDS             complement(5180..5935)
                     /locus_tag="VLA74_10090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrillarin-like rRNA/tRNA
                     2'-O-methyltransferase"
                     /protein_id="HSF51097.1"
                     /translation="MQDKNDDYDHQNNLYNSSYEKAKKDDLADGYRWVNFTGEKQLAT
                     LNLVKGDNVYGEKLVLYDKEEYRLWDPYRSKLAASLLKGLKNLQIKNGSHVLYLGAST
                     GTTVSHISDIIGSSGVVFAIESSIRVARELIENVANKRENIIPIIEDARKPSSYFSTY
                     GEIDVVYCDIAQPDQTEIAINNCNMFLRDKGKILLVIKARSIDVTQDPKSIILQEAKK
                     LENSGFNIEQIINLDPYDKDHGLIYATYNQKKS"
BASE COUNT         2051 a          911 c          976 g         2048 t
ORIGIN      
        1 tccagaataa atcaatcttc tcataatttc tgcaatctca aggttggtat cgacttgagt
       61 ttttacccta tgaagtcgtc cactagtttc aagatcttgt aaatattcgg ttaaactatc
      121 aaaaaccatt aatcttaata ttatcgtgac tttacgttat aaaaagtcaa ttacatctat
      181 atctccaaaa acagagcact atgatttcta cttgtatatc gaatacttga taattgaatt
      241 atttatttca aatttattta tagaactcaa tgatgcttta ttattcccca aacaatcaca
      301 gctcctataa atccaaaaag tccaataagt acaggaaaat cgaatgtgtt taaaatatgt
      361 atgatatcat ttattgtaaa cgacacaaaa gtagatcagg ttatatattt atattcggac
      421 ataatcaaaa ttataaataa tttgccaaaa atttatttac aacttcagaa taaaatgcct
      481 attaatttga ttttattcga tattaaaact atactatcta actaaatttc ttgtagtatg
      541 taaaaatgga aaatatcaat attcaagcat taaaattttt tttggaagga atttgtaaat
      601 gaattttgct agttagcaca gtaaaagcaa tctcttaact gttttaaaat tcgggcagta
      661 gcaccccaaa ttatttcgtt atcatatttg aaaacaaaag aatttgaaaa attcttgtat
      721 gaaaaattat ttgagagact ttcaaagaga tcgaaaattt ctatattaag gatacttgat
      781 acttcatcag ataagatttt tggtttatgt attcgttcct ggaatgttat gtaaggtatt
      841 attgtaaaat ttgaagttaa ggttctaact gctttaagag aacctttgat ttgggcaggg
      901 gtaaaatata gaccaatttc ttcttttgtt tccctcaaag cggtgtgtaa taatgaagaa
      961 tcagtgatct gaaatttacc cccaggaaaa gatatttcgt ctctatggta tttcagatta
     1021 gaacttcttt tagtcaaaat aattttgggc gtagaatcag tgaaatgaat tattattaat
     1081 atcgatgaca gtttaaagtc ggtgggagtt agagaataat aatctatatc aactagattt
     1141 ggtacaattt tctttattat ttcttctttg cttagataca acaagaaaag attatttgat
     1201 attattttta agattttatt tatttgtgct tttttaaagt aagaagtgcg tatcttgcat
     1261 gtaagaggtg tcaattttgc aagaaaaaca attgtatttt atactcctga aggtgaaaaa
     1321 atagtgtatt agttgattat tcattatgaa ttaaatccac caaagatttt gccaggtgag
     1381 tgttttgatc gtgacagatt gtttgaagac attgaaaaca tcaaaggaaa gatatcttta
     1441 ttagaaaaat atgtagatgg tattcatttt actgattctg ttctaggaat tcctaggctt
     1501 tcaagtatat cgatggcaga tataataaaa aggtcaacaa agaatccgct gaaaatttct
     1561 tgtagtgtaa gaacaagaga tagaaatttt acagccatgt atcaaattgt tactgattca
     1621 atattatcag aaattgatag tttattaata ttgctaggag acgaaccaat taaaggaccc
     1681 aagaacaata atccagtaaa accaagtgca tttgtttccg aactgaataa acagggattt
     1741 aataaaattg tgaaattaaa tttatcaatt cccaacaaaa tcaccaattc tacaaatatc
     1801 caaaaaaaga ttgaagcaaa accgtatgca tttgttactc aatccattga atctttaaat
     1861 gatctagaaa aaatagttga cactgtaaaa ccatttaaga taagggtagt tgcttgtatt
     1921 atgttacctt ctgaaaaaaa cagaaagtct gctgatgcaa taggacttga ttggaaggaa
     1981 tacgaaaaag cgcctattga ctttattact aatgcaggga aactcgctga tgagatcttg
     2041 ttaacttctc ccaatcattt tgcattggcc ggagatgtac tttcaaaaat cagatgctaa
     2101 gagtgttgtt ttttagaatg tatcatctcg gattttagtt cgtagagtac ttgtctttga
     2161 tactccttca acccatcatc ctcagttaga cgtggtcttc tatagtcaat ttttatatct
     2221 ttttttattt ttcctggtct gctagtaaat acaactactc gatctccaag acatatcgat
     2281 tctgtgatat tatgggtaac aaaaataatt gtcttgttgg tttttgccca tattaattgt
     2341 aattcaacca ataacaaatc tcttgtctga gaatctaatg cagcgaatgg ttcgtccatc
     2401 aataaaacct ctgggtctaa aaccaaggac ctcgctatgg ctactcgttg tttcatccca
     2461 cctgaaagtt gatatacata agcatcggca tatttggaga gttgcatcat gtccaaatat
     2521 tgcatggcta tctctcgtct tttcaccttt tctacctttg ccattttcaa accgaattca
     2581 acattatcta ttacttttaa ccaaggaaac aatgcatttt cctgaaatac tataattctg
     2641 tctggtcccg tttcagttat ttgtctacca tttaagatta cttgtccctg ggttggttta
     2701 tctaagcctg ccaagatgtt gagaagagtt gattttccac atccagaagg tcccacaaga
     2761 catacgaatt cgccatcttt tactgaaaga ttgatgtttt caactgcatt tatttttgtt
     2821 gatagcttac cttcgtttct tgtaaaagat ttggtaacat tttttatttc taatttgacc
     2881 aagagaatac actacacctc caaatcgcta aaagctattc caaagagtta ttaatactgg
     2941 agtagcataa aaatgcgtca aaatgaacga aatattcatg gttctacaat aaaaaacatt
     3001 tctagaattg gtttttgcaa atgatccaca gtatactcgc accgcattga tataaagaat
     3061 ttgattattg acagcatcgt agtatgataa aatgttatgt gggttcacgg aaatttttgt
     3121 gttatgaacc atcattcaca tttataaaaa ttagcaaata taaatactag cattttaaca
     3181 aatcataatg atatgatatg gtaaaaatga ttaatttttc aaaagtgaca atatttcatg
     3241 tatggaagca tttgttttaa aacctgtagg acggaaaatt gttcttgatg cattaaaacc
     3301 agataatgat aatttttcta taagctccat taattttata ggactggttc taagcattga
     3361 tccaatctca tccaatgaaa aataatacgg aatatcatct aattcttgaa aacttgttgt
     3421 aaaaattttt tttatttgtc tgaagaggcg atttgttttg gaataatctt gatcaagata
     3481 gatttcatta atttttgata aaattttttt atcgtatagc ttgccaatcc atagctgtcc
     3541 agcaacacta gtttttacat tacatatttg acatttgtct gttgtagaac gagatgattc
     3601 gaatgtgttt ctatcaccac atttaaaaca atgctgaatg tatccgatgt tagaaaaaac
     3661 atcatttgct tggtttttgc taaaaaataa ctgcagaaaa attcgaaaat agtgtctatt
     3721 tgaatgagcg aaaactggta atactgttat tcctaatctt gctgcttgta aagctattga
     3781 agaaagaaga agacgtgtag caacttcatt ggaataggta ttattgatag agataccaga
     3841 atattttcta agacacacat tttgatagat tccacttaaa actgcagtat cagttgcagt
     3901 aacagaaatc aacccaccgt tttcgattga acgcaaaaca cagtcaataa atggcgctgg
     3961 actcccgaat ggatcaaggt ctatgattga aaatcgatca ttatgaagag aagaatgacg
     4021 cgagatgaga aatttgcata cttcagatct agaaaaaaaa catttgtcaa gtattgaatt
     4081 tagagcggct gattcttttg ctatatctat tgctagctcg tttacatcat ttatgaaaac
     4141 acgagaaact tttggcactt cgacggctac ccttaatcct ctaggtccga tacctgcaaa
     4201 ggcatcagca aaagtaatct ctccgttatt atgattatct tccaaaaaag cattataaag
     4261 ataaatcgaa atatccctat tcaattcggc taaaggattg aagaatgcag ggtaatgggg
     4321 tgggacttta tcttccaatg atgatttggg tacgagtaaa ttggtatttc cttccttgat
     4381 taattttaaa gttgttgtaa tagcagtatc catgtgcttt ggtttgccaa tataattgtg
     4441 atctaattct tatatatagt caattttatt tataaactgt tttcagtaat tttaaattaa
     4501 tacagtagtg attgaaaaga tagtaatcaa tgcttctgtg tggagtggat gaggcgggga
     4561 gaggttcagt cataggtcct cttgtagtag caggaatcat gataaaaaag tccaaagtga
     4621 agaatctagc tgaaattgga gtgagggatt caaagaagct aacaagagaa aagagaaata
     4681 ctttatttta tgaaattctt gatattgctg aatttacttg tgtttataag attgggccta
     4741 aagagataga tgaaagtgtc catcgaaaca atctcaataa attggaagga agagtcatgg
     4801 ctaatatact taaccacttg gaaggagata ttgcatatat agattcttgt gacgtaaaca
     4861 ttaaaagata tacaacgtta ctcagatcac atttaaatcc gtacaatagc aatgtgaaga
     4921 tttttgctat gcataaggcg gatatattga atattgcagt atcagctgct tcaataattg
     4981 caaaggtgat aagagacaaa gagatagaga atcttcaagg acagtttcac aatataaaca
     5041 taggcagtgg atatcctgca gatagaagga ccatggaatt cattaacaat ttgatagaag
     5101 agaaaaataa ttttccagat tttattagaa gatcttggag ccctgtaaaa aatatgttag
     5161 aaaagaagca gaaaaaaatt tatgattttt tttgattata ggttgcatat atcaatccat
     5221 gatccttatc ataaggatcg agattgataa tttgttctat attaaatccg ctattttcta
     5281 gtttctttgc ttcctgaaga ataattgatt tgggatcttg tgtaacatcg atgcttctgg
     5341 ctttaataac cagcagaatt tttcccttat cccttagaaa catattgcaa ttatttattg
     5401 caatttctgt ctgatcaggt tgtgctatat cgcaataaac aacatcaatc tcaccatacg
     5461 tagaaaaata agaagacggt tttctagcat cttcgataat tggaataata ttttctcttt
     5521 tattagcaac attttcaatg agttccctag ccacgcgaat ggacgactcg attgcaaaaa
     5581 ccacaccaga gcttcctatt atatcagaga tatgacttac agtagttcct gttgaagcac
     5641 ccaaataaag aacgtgtgat ccattcttga tttgcagatt ctttaaacct ttcagaagcg
     5701 atgctgccag tttacttcta tatggatccc aaagtctata ctcttcctta tcatatagaa
     5761 caagtttctc gccgtaaacg ttatctcctt taacaagatt aagagtagct aactgttttt
     5821 ccccggtaaa attaacccat cgataaccat cagctaagtc atctttcttt gctttttcgt
     5881 aggaagagtt atagagatta ttttgatgat cataatcatc atttttatct tgcatataat
     5941 agaagtgaaa gagtcgttaa tcaatatata gatatatact tcaaaa
//
LOCUS       DATIAS010000504         2837 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1587617, whole genome shotgun sequence.
ACCESSION   DATIAS010000504 DATIAS010000000
VERSION     DATIAS010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1587617"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..920
                     /locus_tag="VLA74_10095"
     CDS             183..920
                     /locus_tag="VLA74_10095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51098.1"
                     /translation="MNSNFILTILFAISIYFTVFLSLFPDSNLFYVEAQQSTVSDHEL
                     HGYFEQMKGHLDASIINVQSNNSALAVAHALHPIEEIVDIINNRLIEANETLTKEFSS
                     KLSEYVQTVRSDNLSKITLQKTELEKLLNDALDQSIPLEKRNHNRDYILNVTAELITI
                     ASEEFNEAMFNGQIINLLEYQDGQQFIKRAITLLEESQGFLWDGHKKYFTKLTEMKKD
                     LDLKRDPSYVDMDVKDMLCDIKKEFYC"
     gene            1163..1312
                     /locus_tag="VLA74_10100"
     CDS             1163..1312
                     /locus_tag="VLA74_10100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51099.1"
                     /translation="MENIQFTLMGGTLDDEACSLIGLKHCLHHSIEKGRCEELTSILK
                     IEPSF"
     gene            1688..>2837
                     /locus_tag="VLA74_10105"
     CDS             1688..>2837
                     /locus_tag="VLA74_10105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51100.1"
                     /translation="MSLFVFVFIICIFSPYEVSSQIDIVNNNSKSKIYSEDLQRNFTV
                     FVHLERILTKINLAHASFESGNIHDAFSHAYFPHQVIFPSIKNELLLIDPMLSSKLEH
                     LLTDLPISLTNIKADENLLRKTFSETRNTIDSIENNLVNSQNLDSKYFLIQGSIVLMR
                     DAKSVLENIKSNQSELESEQDYQVIKELVNRSEYQISRISNSIPTQELDSILDLSLQI
                     GNYTTNHDNNAIFKSMNNLEKELLELSKSSLSKSLPLEIQKYFSNIDSLLNVVVNEIK
                     DNKDYKKADKAAISAYLDNYEYLEVPIEQNDPELMLEIELNMREELRQMIKDNASSEK
                     IESFVYKILQKLEEAENVLLNDPSITTVAANTEIANDYNDNQQRNNLAD"
BASE COUNT         1084 a          379 c          422 g          952 t
ORIGIN      
        1 tatgatctgg attattgtaa acccaggcaa aatacaatgt ccttgaaaat cgttgggcag
       61 tatacaatat caaggaatat ttaaaatgtt agttttgcag tcgacattga tttcctcgct
      121 tttcatttat tagaaacata cataggctaa aatagatatt gtatattttg aatgtaaata
      181 atatgaattc gaattttatt ttaacaatat tatttgcaat ctcaatatat ttcactgttt
      241 ttctttcatt gtttccagat agcaatttat tttatgtaga agcacaacaa tctacagtaa
      301 gtgatcatga actccacggg tattttgaac aaatgaaggg acatttggac gcttcaatta
      361 taaatgttca aagtaataat agtgctttag ctgttgctca tgcgttacat cctattgaag
      421 aaattgtaga tataataaat aatagattaa ttgaagctaa tgaaacgtta acaaaagagt
      481 tttcaagcaa gttaagtgaa tatgttcaaa ctgtacgatc tgataatctc tctaaaatta
      541 ctttacagaa aacagaatta gagaaattgc ttaatgatgc actagatcaa tcgatacctc
      601 tagaaaaaag aaatcataat cgagattaca tactcaatgt tactgcagaa ttaataacta
      661 tagcatctga agaatttaat gaagcaatgt ttaatggaca aattattaat ttattagaat
      721 atcaagatgg ccaacaattt atcaaaagag caataacgct tttggaggaa tcacaaggat
      781 tcttatggga tggtcataag aagtatttta ccaagcttac agagatgaaa aaagatttgg
      841 atttaaaaag agatcctagt tatgtagaca tggatgtaaa agacatgctt tgtgatatca
      901 aaaaagaatt ttattgttag ctcgtttaat taattaaaca tcaaccatat tcctttttag
      961 gtagtacata atgatcgact ctgtcaaata agtaataaaa actatatcta ggaatattct
     1021 ttataatata aaagtaatag ttgaaagaat aaaacttgct tatggtttat taaaaaccaa
     1081 tagttctgtc cttggaatct acatttcaga ggttaaaaaa tgatagttcc aggagaattc
     1141 tttagtacat ttgtgtcaac atatggaaaa catacagttt acactgatgg gcggcacttt
     1201 ggatgatgaa gcttgtagtc taattggatt gaaacactgt ctacatcatt caatagagaa
     1261 aggtagatgt gaagagttaa ccagtatttt aaagatagaa ccgagttttt gatgactatt
     1321 atctttttat ccaacgaatg taatctagta cataactgga ttcaattctt tatttctctg
     1381 tatcatgata cagcaaataa tgataatgat aataatagta attttgaatt agagaatatg
     1441 aatattgtct taaattaaaa gaaccgttag aaattctatc tatatttctt ctgtagaaag
     1501 agatagtgtt aaaagtatca attattctga tcattaaaaa tctataatat atttttcaat
     1561 cataaatttt tctatatatt taaatatagc taactagtta ggataaccta ataacttatt
     1621 acaatgtcaa agaatgattt aaaatatgaa taacaatgga aaaaatctga attatatgtt
     1681 actatgtatg tctttattcg tatttgtttt tattatttgc attttctctc cctatgaggt
     1741 atcttctcaa atagatattg ttaataacaa ttctaaatct aaaatatatt cagaggattt
     1801 acaaagaaac tttactgtat tcgtccacct tgaaagaatt ctaacaaaga taaatttggc
     1861 acatgctagt tttgagtctg gtaatataca tgatgctttt tcccatgcat attttcccca
     1921 tcaggtaatt tttccatcaa taaaaaatga attattatta atcgatccta tgttgtcttc
     1981 aaaattagaa catttgttga ctgaccttcc aatatctctg accaatatta aggcggatga
     2041 gaatttattg agaaagactt tttctgaaac acgaaatact attgattcaa tcgaaaataa
     2101 tttagtcaat agtcaaaacc ttgattcaaa atattttcta attcagggtt ctattgtgct
     2161 aatgagagat gcgaaatcag tattagaaaa tatcaaatca aaccaatctg agctggagag
     2221 tgagcaagac tatcaagtta tcaaagaact tgttaacaga tctgaatatc aaattagccg
     2281 catctctaat tcaattccta ctcaggaact tgattctatt ttggatctat ctttgcaaat
     2341 aggaaattac actacaaacc acgataataa tgctattttt aaatcaatga ataatttaga
     2401 aaaagaactt ctggaattat ctaaaagttc tttatcgaaa agtcttcctt tagagatcca
     2461 aaaatatttc tcaaatattg actctttatt aaatgttgta gtaaacgaga tcaaggacaa
     2521 taaggattat aaaaaagcag ataaggctgc aatttctgca tacttagata attatgaata
     2581 tcttgaagta ccaatagaac aaaatgatcc agaactaatg ttggaaattg aattgaatat
     2641 gagggaagaa ttaagacaaa tgataaaaga taacgcgtca tcagaaaaga ttgaatcttt
     2701 tgtatataaa attttacaaa aactggaaga agcagagaat gtattattaa atgatccatc
     2761 aatcacaacc gtcgccgcca atacagagat cgccaatgat tataatgaca atcaacagag
     2821 aaataattta gcagata
//
LOCUS       DATIAS010000505         6050 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1587706, whole genome shotgun sequence.
ACCESSION   DATIAS010000505 DATIAS010000000
VERSION     DATIAS010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6050
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1587706"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VLA74_10110"
     CDS             complement(<1..576)
                     /locus_tag="VLA74_10110"
                     /inference="COORDINATES: protein motif:HMM:NF024977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSF51101.1"
                     /translation="MTIELKVHPSFFKEFATKTWISPSEIIKELIENSFDEDATKVLI
                     TLFKNGSICIEDDAGMSEDGMEKFLLLGSPHKKIESISPKFKRIRTGRYGTGRLSFLT
                     SFEKMKLKTRKGNYNKSIIIDESSLNNLFTGNSVLNEIKEQHLSRNGTELSLYNAKMS
                     IDPIKLAKEIRKLAILRQPMFQVFIKQTDDFN"
     gene            complement(683..1561)
                     /locus_tag="VLA74_10115"
     CDS             complement(683..1561)
                     /locus_tag="VLA74_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HSF51102.1"
                     /translation="MSNITNKKYPEKKQILYEYLQELPTKYEVVALSRMTNVRASQLM
                     PIRKKFHDQIHIKIIKNRVAQKAFEKLSNIKGIQDLSKQLEGQCALMFTNISPFKLNL
                     IFDQNKVFLPAKGGDIASNEIIVPAGNTGIPPGPVLSEFKEANIPTKIDQGSIAVTKD
                     TIAVKVGGVISQKLASLLTKLNIKPIEAGIAVNYAISEGLQFRESELKLNINEYVEDL
                     KQSFSSALNLAIKSAYVTSETINSILSMAQQQSMNLASESGYITKETVELVMLKTQTK
                     AFSLLNKLKSHGYNAQ"
     gene            complement(1577..2233)
                     /locus_tag="VLA74_10120"
     CDS             complement(1577..2233)
                     /locus_tag="VLA74_10120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HSF51103.1"
                     /translation="MTSEVELRELLNNARKNYQKHNFDQSVDLTIILKDIDVKKGFSF
                     NEVVHLPHRPNKQATVCVVASGEMGSRAKKVAAEKIIEQEELDRLGTNKKEAKKVAKK
                     YDFFLSDTALMSTVGRSLGQYLGPKGKMPTPMPYGAPIENILDRFRSSVRVRVRNQLN
                     VSAKIGDEKMEDKQLLENANAILSLVEKKLPQGDKNIRNMLIKFTMSKPADLLSSQKS
                     "
     gene            2414..2587
                     /locus_tag="VLA74_10125"
     CDS             2414..2587
                     /locus_tag="VLA74_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51104.1"
                     /translation="MTALWLIILTIITCASVPVFMVILTSPHPAKFILGTDELGIQLE
                     TMNYLILNISLFK"
     gene            2675..3709
                     /locus_tag="VLA74_10130"
     CDS             2675..3709
                     /locus_tag="VLA74_10130"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51105.1"
                     /translation="MAENNLLGMIIWLGELTFSSWLLSYGAEHLSERYGAKFVGRVLL
                     SIATTLPEIAIVIYAAASGAYGIAIGSGLGSNIMMMTLGLAIMLIISTTRLSKAPLKM
                     IDVSTFKNDKIFLLATAVISLILFLDGYDYVDGIIFVGIFIVYIFIALYEMKLEMKEN
                     LFKDNAKEIGNKNNLGKRNNKKMVIAVGVFLAGALGILIGAEPFIHSMQGFSVEVGIS
                     AIVLAVILSPIAGEMPEKISMMILARKGAAGASIAIANVLGSKILNNSLLLAVAVFAA
                     MVNFGFYETIEITEILFYQIILATLVTIIAVIPMFRRKIGLQFGFMLLFLYIVSILIQ
                     FILPQNVEIH"
     gene            complement(3990..4295)
                     /gene="rpl12p"
                     /locus_tag="VLA74_10135"
     CDS             complement(3990..4295)
                     /gene="rpl12p"
                     /locus_tag="VLA74_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein P1"
                     /protein_id="HSF51106.1"
                     /translation="MEYVYAALLLHKLKQDLTEDNITNVIKATGTNPDSVRIKALVAA
                     LSDVNIEEALKAAPMAIAPVPTSGGPAPEAKTEVHEEEKKEEKKEEEALEGLSSLFG"
     gene            complement(4348..4851)
                     /locus_tag="VLA74_10140"
     CDS             complement(4348..4851)
                     /locus_tag="VLA74_10140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51107.1"
                     /translation="MFGIGRIKPGDYVFTVRKETDSHIIIIGRVQYASKNILTVIGSS
                     IKPSGLLKRKLQGKIGKRSNEVLNDPDPDNCIFILIDRIESENFSGQVNQETDKVIWI
                     NEKRYFILDGWIKENLSEMFANVISSYSEEERDHFRSVLIEKMNSLYDKDLKDHVYAV
                     VRSTRIL"
     gene            5087..5335
                     /locus_tag="VLA74_10145"
     CDS             5087..5335
                     /locus_tag="VLA74_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51108.1"
                     /translation="MGQVRYKRKEERQPSLYKKLSFRFVVNNSGHDSVYHEFIVTWLG
                     IQISGQKKCRSQYFVKSHVTKYRIRRVYTHWGTRCYEE"
     gene            5931..>6050
                     /locus_tag="VLA74_10150"
     CDS             5931..>6050
                     /locus_tag="VLA74_10150"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HSF51109.1"
                     /translation="MKILTELTKDASISVPQLSKKLNINSSVLYSRIKRLSKRS"
BASE COUNT         1959 a          960 c          956 g         2175 t
ORIGIN      
        1 attaaaatca tcagtttgtt ttataaacac ttgaaacatt ggttgtctta aaattgccaa
       61 tttacgaatt tcttttgcta attttatagg atctatagac atttttgcgt tatagagaga
      121 taactctgtg ccatttcttg ataaatgttg ttcttttatt tcattcaaaa cagaattacc
      181 tgtaaataag ttgtttagag aactttcatc aataattata gacttattat aatttccctt
      241 cctcgtcttg agtttcattt tttcaaaaga tgtcaaaaaa gacagtcgac ccgtgccgta
      301 tctcccagtt cttattcttt tgaactttgg agaaatagat tctatttttt tatgtggaga
      361 accgagaaga agaaattttt ccattccatc ttcactcatt ccagcatcat cttcaataca
      421 tatggaccca tttttaaaaa gagtaatcag cactttagtt gcatcttcat caaaggaatt
      481 ttctattaat tccttaataa tttcacttgg agatatccaa gtcttcgttg caaactcctt
      541 aaagaaagaa ggatgtactt ttagttcaat tgtcattatt gaataataaa aagaatttct
      601 ttcctttatt tattgtgttc gtaaacgcta tttattaatc gctaaaccca gtaataaatc
      661 caaattagaa tatagaaatt ttttattgtg cattatatcc atgtgatttt aatttgttta
      721 atagactaaa agcctttgtt tgggttttga gcattaccag ttctacagtt tctttagtaa
      781 tgtaaccaga ttctgaagcc aaattcatag attgttgttg ggccatagat aatattgaat
      841 tgattgtctc actggttaca taagctgatt ttattgcaag atttagagcg gaagagaagg
      901 actgtttaag atcttcaaca tactcattga tatttagttt aagttcagat tctctaaact
      961 gtagtccttc tgaaatagca taattgactg ctataccagc ctcgattggt ttgatattga
     1021 gtttggttaa taaagacgct aatttttgtg atataacccc gcctacttta acagctattg
     1081 tatcctttgt aactgctata ctgccttgat ctatctttgt tggtatgttt gcttccttaa
     1141 attcagataa tactggacct ggaggaatac ctgtatttcc tgctggaact attatttcat
     1201 tggatgcgat gtctcctccc ttagctggta gaaatacctt attttgatca aagatgagat
     1261 ttaatttgaa aggactaata ttggtaaaca ttaaagcgca ttgaccttca agctgtttac
     1321 ttaaatcttg aattcctttt atattagata atttttcaaa agctttttga gctaccctat
     1381 tttttataat ctttatatgt atttgatcat gaaatttttt tctaatgggc attaattgac
     1441 tagcacgaac gttagtcatt cttgatagtg caactacctc atatttggta ggaagctctt
     1501 gcaaatattc atacaaaatt tgtttttttt ctggatattt tttatttgtt atatttgaca
     1561 tattagtata tcacactcaa ctcttctgtg aagacaacaa atccgctggc ttgctcatgg
     1621 taaactttat caacatatta cgaatgtttt tgtcaccttg tggtaatttt ttttcaacaa
     1681 gagacagtat tgcattagca ttttcaagta gttgtttgtc ctccattttc tcatcaccta
     1741 tttttgcaga tacattaagt tgatttctca ctctaactct tacggaactt ctaaaccgat
     1801 ccaatatatt ttcaatagga gccccatatg gcattggtgt tggcatttta cctttgggcc
     1861 caagatactg ccctagagac ctacctacag ttgacattag tgcagtatcc gataaaaaga
     1921 aatcatattt ttttgcaact ttttttgcct ctttcttatt ggtgcccagc ctatctaatt
     1981 cttcctgctc aattattttt tcagcagcta ctttttttgc tcttgacccc atctcaccgg
     2041 atgcgactac gcataccgtt gcttgtttat taggtctgtg gggtaagtga acaacttcat
     2101 tgaaactaaa tcctttttta acatcaatat cttttaatat aatagttaaa tccacagatt
     2161 gatcaaaatt gtgtttttga taattctttc gagcattatt taagagctct ctaagctcca
     2221 cctcgcttgt catcttaaat acacaaagat tggataatta gttacttaaa atcctttagg
     2281 aaaaatatcc gcattagcga ttttttatcg aattctagat caatcaatta ttgttggtcc
     2341 attcggaata tgaaatattg tataaaattt atatacctac aagtaaattc actttctgta
     2401 aatggttgaa aaaatgactg ctctatggtt gataatactg accattatta cctgtgcatc
     2461 agttccagtt ttcatggtta ttttaactag tccgcatcca gcaaaattca tactaggcac
     2521 cgatgaattg ggaatacagt tagaaactat gaattatttg atattaaata tttcactttt
     2581 caaatagatt aaaattttgg tccggttaag ggttgatagt aagagcacaa ctaatttgca
     2641 tattcggaaa agtaaagatt ttttgtgttg aaaattggct gaaaataacc ttctgggtat
     2701 gataatttgg cttggtgagt taactttttc tagttggttg ctatcatatg gagccgaaca
     2761 tttatcagaa agatatggag cgaaatttgt tggaagggtc cttctgagta tagctacaac
     2821 tttacctgaa attgcaatag tgatttatgc tgcggcgagt ggtgcttatg gaatagcaat
     2881 tgggtctgga ttaggaagca atattatgat gatgactctt ggattagcaa taatgctcat
     2941 tatttctact actcgattat caaaagcccc attaaagatg atagatgtga gtacttttaa
     3001 aaatgacaaa atattcttac tcgctactgc tgttataagt ctaattctgt ttttagatgg
     3061 ttatgattat gttgacggaa taatctttgt cgggatattt atcgtttata tattcatagc
     3121 attatatgaa atgaaattgg aaatgaaaga gaaccttttt aaagataacg ctaaagaaat
     3181 tggaaacaaa aacaacctag gtaagaggaa taataagaaa atggtcattg cggtaggagt
     3241 ttttcttgcg ggtgcattgg gaatactaat tggagcagaa ccttttatcc attcaatgca
     3301 aggattctca gtcgaagtag gtatttctgc gatagtattg gctgtcatcc ttagccctat
     3361 agccggagaa atgcctgaaa aaatatctat gatgattctt gctagaaaag gagctgctgg
     3421 tgcatctata gctattgcca atgtgttggg ttctaagatt ctaaacaata gcttgctgtt
     3481 agcggtagcc gtttttgcag cgatggttaa ttttggattc tacgagacga tagagatcac
     3541 tgaaatattg ttctatcaga taatattagc tacattagtg accataattg cagtcatacc
     3601 tatgtttcgt agaaaaatcg gtttacaatt tggatttatg ttactatttt tatatatagt
     3661 gagcattctg atacaattta tcttaccaca aaatgttgaa attcattaac aaaccaccac
     3721 gatcaagttt cgatctcaaa taactttata aataaaattg ataaaacaaa acttctaatt
     3781 tagaacatcg catttacaat catgttcttc gagagaacaa aggtcgcaca gaaattgttc
     3841 tttacaaccc aatggagtac aataactata tgtttttaat aatcgtccac atttacatct
     3901 attggttagc attacaaaaa gattctgaaa taatccgtat ttgaacttcc ggcaattgaa
     3961 aaattgaatt tagattgcca aaatacagat tatccgaata acgaagataa tccttctaaa
     4021 gcttcttctt ctttcttttc ttctttcttt tcttcttcgt ggacctctgt ttttgcctct
     4081 ggagcaggtc cacccgatgt tgggactgga gcaatagcca ttggagctgc ctttaatgct
     4141 tcttcaatat ttacatcact taatgctgca acgagtgcct ttatcctaac tgaatcagga
     4201 ttagtacctg tagcctttat tacgttagta atattatctt cagtaaggtc ctgcttcaat
     4261 ttatgtaata ataacgccgc ataaacgtat tccatcaatt atcaaaatcg gataatcgat
     4321 taaccataat ataaaacttt caaattatca taaaatccta gtgcttctca caacggcata
     4381 tacgtgatcc tttaaatctt tatcgtaaag tgaattcatt ttctctatca atactgatct
     4441 aaaatgatca cgttcttcct cagagtatga ggagattaca ttggcaaaca tctctgacaa
     4501 gttttcttta atccaaccat ccaaaataaa atatcgcttc tcatttatcc atattacctt
     4561 atcagtttct tgatttactt gaccagaaaa attctctgat tcaattctgt ctattaaaat
     4621 aaaaatacaa ttatcagggt caggatcatt tagaacctca ttcgatcgtt ttcctatttt
     4681 accttgtaat ttgcgtttta gaagtccact tggttttata gaagatccta taacagttaa
     4741 gatattttta cttgcatatt gaactcttcc aataattatt atatgagaat cggtttcttt
     4801 tctaactgta aaaacataat cgccaggttt aattctccct attccaaaca tttgttgaaa
     4861 gttaagaatt aaattatata ttatttactg ctttttattt aagcagtaga gccaatcccc
     4921 accaacgttc tatttatgta taacatgaaa attagattta aaagaagtag aacatttatt
     4981 ataatatcat atatccgtac tttcttggtt taagtttagg tatggatcta aagaattaat
     5041 actaagataa acaatgaaaa taattctttg tgaaattgga taaggcttgg gtcaagtcag
     5101 atataaaaga aaggaagagc gacagccttc attgtataag aagctgtcat tcagatttgt
     5161 ggtgaataat tctggtcatg attctgtcta ccacgagttc atagttacgt ggttaggaat
     5221 ccagatctct ggacagaaaa aatgtaggtc gcagtatttt gttaaatcgc atgtaacgaa
     5281 gtatcgtata cgtcgcgtat atactcactg gggtacaaga tgttatgaag aatgaaggat
     5341 aattgaattg aaacgctatc attgagagaa aagtctgatg gaaaaggtca atcaatattt
     5401 caaagatagg aaagaaaatt ttggtgacaa ttatccatga gtgaaaagta gataaagaga
     5461 acaagaagat tgcaatttat tacatttaca taactggata ctattttttg tttacatcta
     5521 taattgcaca acaggagata atagatctgt gggtaattag taaccatgta aaattttata
     5581 tgattaaacc aaagattaaa gaagataaaa ctgctaaatt cataaaattt cataaattat
     5641 ttcaattttt cgaatattcc gatttttggc taactacaca atagatctaa tgaagaaggt
     5701 gagttaatgg aactgaatac tgaattatct tcgttaatat agcactactt acaatactat
     5761 aaaattaata gaaaaaaata tcagttattt cattttatta attacacatt tgaaaaaaca
     5821 aaaaaatata taaaaaaatt ataattaatt actaaaaata taattacatt tattaatgca
     5881 gatttgtaag gtattgcgga tgcaatttgc aacgatttga cgagcttgat atgaaaatat
     5941 tgacagagct tactaaagat gcaagtattt cggtaccgca gcttagtaag aaattaaaca
     6001 tcaattcctc ggtactttac agcagaatta aacgtttatc caaaagaagt
//
LOCUS       DATIAS010000506         3256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1724680, whole genome shotgun sequence.
ACCESSION   DATIAS010000506 DATIAS010000000
VERSION     DATIAS010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3256
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1724680"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            299..1729
                     /locus_tag="VLA74_10155"
     CDS             299..1729
                     /locus_tag="VLA74_10155"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF51110.1"
                     /translation="MNANNSIDSKNKKRKILIIGGVAAGTSAASKARRIDPNADIKII
                     QEEPLVSYGSCGIPYVIEGIINDFDELIARSVEEFRNKYHIDIIVNTLATKIDHSEKK
                     VYAKDVQKKKELVFDYDSLVIATGARAVIPKIKELYYDKGNSMTEGLFLLRNFEDGLY
                     IRDYIKNAKSVIIVGAGLIGIEMAESFKQRGMSVILIEIADHVLASIVDKDMAEIIEE
                     ELKSNGVNVRLKEKVEQILLESHFGDGKYRTKVKGVRTNREEILADCVLFGVGVRPNS
                     EIAKDAGIELGVHNAIKVDDYMRTNIIDIYAAGDCATARNYITNKDDYLPLGTTANKQ
                     GKIAGENAAGGNIKFEGIAGSAITKIFGLFVGKTGLSKEEALENGFEPLESKIEDITR
                     AGYYPDNKKIWIKLVADKKNKKILGAQIIGGEAVKGRIDLISFALLKQSTVKDLVNYD
                     ACYVPPASPVWEPINIAAIQMSKLLT"
     gene            1944..2543
                     /locus_tag="VLA74_10160"
     CDS             1944..2543
                     /locus_tag="VLA74_10160"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSF51111.1"
                     /translation="MENIKSTILLTVSYFLSICILVASLVITVNSVFSQTQQEVSHVT
                     EVTNDSIFTTLRKDGAIYNLKQNITFPAGKDMTYIDAIDNGKVIVATSSADNQTFIFN
                     NTENNLIAKIKVGDVPKGIKISPNGNYVFVANELDGTVSIINLKNSSVIKNIPVGKLP
                     HNIVFSPDGLKAYVTDQGEDKIIVIDTNSFEIINEIQDS"
     gene            2559..2957
                     /locus_tag="VLA74_10165"
                     /pseudo
     CDS             2559..2957
                     /locus_tag="VLA74_10165"
                     /inference="COORDINATES: protein motif:HMM:NF014312.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome D1 domain-containing protein"
BASE COUNT         1260 a          395 c          564 g         1037 t
ORIGIN      
        1 actgaaataa gagtcaaaaa ttgggtattg gagaataata ccattacaaa aataataaaa
       61 aacaaccaaa caaatttaga aaaaagaact ttcatttgat ttgataaaca ttactttaaa
      121 aatatttaaa gatttcaaac cctttttttt ctttggcaat tatttataat atcaatttaa
      181 atttgttatt gtacgttagt tgaagagtaa agttgatatt gtataggtaa gttttatttt
      241 tgaaaacagt ttaaacttat ataataatag cataacatct agaaggaata acaacaatat
      301 gaatgccaat aatagtatag attctaaaaa taaaaaaaga aaaattttaa tcattggagg
      361 tgttgcagca ggaacaagtg ctgcttcaaa agcaaggcgt attgatccaa atgcagatat
      421 caaaataatt caagaagagc ctttagtctc gtacggatca tgcggaatac catatgtaat
      481 tgaaggaata attaatgatt ttgatgaatt aattgcacga tctgtagaag aattcagaaa
      541 caaataccat atagatataa tagtaaatac tctggccaca aaaatagatc attcagagaa
      601 aaaagtatat gcaaaagatg tacagaaaaa aaaagagcta gtatttgatt atgattcact
      661 tgttatagcg actggcgcac gagcagtaat tccaaaaata aaagaattat actatgacaa
      721 aggaaattca atgacagaag gtttattttt actaagaaat tttgaagacg gattatatat
      781 tcgtgattat ataaaaaatg caaaatctgt tattattgta ggagcaggac tgataggtat
      841 cgaaatggca gaatcgttca agcaaagagg tatgtctgtc atattaatcg aaatagcaga
      901 tcatgttctt gcaagtattg tagataaaga tatggctgaa attatagaag aagaactaaa
      961 gagcaatgga gtaaacgtta gattaaaaga aaaagttgag cagatccttt tagaatctca
     1021 ttttggtgat ggtaaataca gaactaaagt caaaggtgta agaactaata gagaagaaat
     1081 tcttgcagac tgtgtattat ttggtgtagg tgtaagacca aactctgaga ttgctaaaga
     1141 tgcaggaata gaattaggag ttcataatgc aataaaggtt gatgattata tgagaactaa
     1201 tattatagat atttatgcag caggtgattg tgctactgca agaaattata taacaaacaa
     1261 ggatgattac ctgccattag gaacaacagc aaataaacaa ggaaaaatag caggagagaa
     1321 tgccgcaggt ggcaatataa aatttgaagg aattgctgga agtgcaataa caaagatatt
     1381 tggactgttt gttggaaaaa ctggtcttag caaggaagag gctttagaaa atggttttga
     1441 gcctctagag agtaaaatag aggatatcac aagggctggg tattatccag ataataaaaa
     1501 gatatggata aaacttgttg cagataagaa aaataaaaaa atattaggtg ctcagattat
     1561 aggaggagaa gcagttaaag gaagaattga tcttatttct tttgctttac ttaaacagag
     1621 tacggtcaag gatttagtaa attatgatgc ctgttatgtt ccaccagcgt caccagtatg
     1681 ggagcctatt aatattgctg ccatacagat gtcaaaatta ttaacttaag taatgataaa
     1741 aattattaga aggcagttat tctagtatat ttttttctct ataatataag taaaaataat
     1801 ggatattaca aaattatctt tttataaata tattaacttt catttttatc tattgcaatt
     1861 atctatgata taatgtaaat aattatttat aggatttttc tccagaaata aagaaataaa
     1921 tgaaattcat ttgagaaatt attatggaga atataaaatc taccatttta ttaactgtaa
     1981 gttattttct atctatttgt atactagttg catctttagt tattaccgtc aatagtgtat
     2041 tttctcagac acagcaggaa gtttcacatg ttacagaagt tacaaatgac tctatattca
     2101 ctacattaag aaaagatgga gcaatataca atttaaaaca gaatataact tttcctgcag
     2161 gaaaggatat gacatacatt gatgcaatag ataatggaaa agttattgtt gcaacaagca
     2221 gtgctgataa tcaaaccttt atctttaata atactgagaa taatctgatt gctaaaataa
     2281 aagtgggtga tgttccaaaa ggtataaaga tatcacctaa tggaaattat gtctttgttg
     2341 ctaatgagtt ggatggaact gtcagcataa ttaatctcaa aaattcaagt gtcattaaga
     2401 atattccagt cggtaaatta ccacataata ttgtattttc acctgatggc ttaaaggcat
     2461 atgtaacgga tcaaggagaa gataagatta ttgtgataga tactaatagt ttcgaaataa
     2521 taaatgaaat tcaagatagt tagggaccac acaatctaga tataacaaat gatggtaaat
     2581 tgctttttgt gtccaatgca gcttcaaatg atgttgcaat tattaatact acttcatctg
     2641 aaatactaaa gaaaatccca gtaagtcttg ggcatcatgg tatagatgtt tcacccgata
     2701 ataaaaaagt atatgtatca ggaataggct cagacaaagt aaatgtaatt gatttagaga
     2761 aacaagaact tgtaaagcaa gtaacagtag gtttgggtcc tcatggcata cgtgctagtt
     2821 caaatggaag ttatctatat gtagatgtaa caacaacaaa tgagattgtt gtcatagata
     2881 ctaatagttt agaaattatt tcaagaattc caactggaaa tgttccattt tggatagcag
     2941 tatctggaaa taattaatta taaatagcag gtattttaag tatttttatt ttatccattt
     3001 gattttttta ccctgcattg acctttatta cgtgtacata ctgtaaatag caggcaccga
     3061 tcttctggca tcataaggtc tatgttgttt acgatattac cctaatgatt aatatatttt
     3121 aaacttgttt tatcatagaa attaaaaaaa taattaggga aatttatcct ccacctttaa
     3181 tttgtcctct aatttcaccg ttaggatttt cttccgtatg tacattaaca tacgtctcgc
     3241 ctaattccat agattt
//
LOCUS       DATIAS010000507         2665 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1453987, whole genome shotgun sequence.
ACCESSION   DATIAS010000507 DATIAS010000000
VERSION     DATIAS010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453987"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..584
                     /locus_tag="VLA74_10170"
     CDS             180..584
                     /locus_tag="VLA74_10170"
                     /inference="COORDINATES: protein motif:HMM:NF018893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 family protein"
                     /protein_id="HSF51112.1"
                     /translation="MNKSNIIEMDNEVNGSYSRLFIYRIPKKNHNAIVRLNKQFIDTL
                     GTDGPLHTEFFCMSNNESLRPFTSIAKTISAGQDDEVWMEIHSYSNRKHADDVQAKIE
                     NDENMKPICGQFGDLMSPNSEGIMGDFSHITI"
     gene            628..1065
                     /locus_tag="VLA74_10175"
     CDS             628..1065
                     /locus_tag="VLA74_10175"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF51113.1"
                     /translation="MSNQYDDKEIKEKIKISTIVHFEIPADDVERARKFYSTLFGWKI
                     EKIEVKKAGETMDYWMISTSSNKGNSSEKSFHLDGGLIKRQHTQQPNLNYISVPSIDE
                     YSNKVKELGGKVVLPKTEITDYGFFAVCMDTENNAFALWESKK"
     gene            complement(1326..2081)
                     /locus_tag="VLA74_10180"
     CDS             complement(1326..2081)
                     /locus_tag="VLA74_10180"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HSF51114.1"
                     /translation="MKSRFTIIDAPSILGLRPTGVEYLPEALKAAGLIKKLNADYAGK
                     VSSSLSYNSERDKVTLLLNPDSIKTFSLQLADRVSSVIRSRLYPMVLGGDCTILIGNL
                     LVLRRLGRYRLFFIDGHADFYQPEASLTGEVADMDLAIVSGRGPDVLTNIDNLKPLVH
                     DEDIILFGYRDREQAASFGSQDVSNTNIHSFDLTYIKQLGIRAAASEAVRNILKDELC
                     GFWIHLDVDVLDDAIMPAVDYRLKGGLSFDELS"
BASE COUNT          953 a          414 c          428 g          870 t
ORIGIN      
        1 ccacgtttaa caagtgattc attgtacttc ttccagttca catgtattat gactagaata
       61 ggttagctaa atgtgttagg aatagcgagt tacgcaacaa ggcaactttg attgattgca
      121 actaactata tttttactcc attacataat taaatactat actttgtata ctgtttttca
      181 tgaataaatc aaacataata gaaatggata atgaagtcaa tggaagttat agccgcctct
      241 ttatctatag aatacctaaa aagaatcata atgcgatagt cagacttaat aaacaattta
      301 tagatacatt aggaacagat ggacccttac atacagaatt tttctgtatg agcaataatg
      361 agagtttaag gccctttact agtatagcca aaactatctc tgctggccaa gacgatgagg
      421 tttggatgga gatacattcc tatagtaatc gtaaacatgc cgatgatgtt caagcaaaga
      481 ttgaaaatga tgaaaatatg aaaccaattt gtggacagtt tggtgatctt atgtctccga
      541 attcagaagg aataatggga gatttcagtc atatcacaat ttagagattt tattataata
      601 taataacaac aggtgaaaaa gtacaatatg tcaaatcaat atgatgataa ggaaataaaa
      661 gaaaagatta aaatttcaac tattgtgcat tttgaaatcc cagcagatga tgtagaacgt
      721 gcaagaaaat tttattctac tttatttgga tggaaaatag aaaagattga agtaaaaaaa
      781 gctggagaga caatggatta ttggatgata tctacttcat caaataaagg aaatagcagt
      841 gaaaaatctt ttcatctaga tggaggtttg ataaagagac aacatacaca acaaccaaac
      901 ctgaattata taagtgtacc gtcaatagat gaatattcta ataaggtcaa ggaattagga
      961 ggtaaagttg tattgccaaa aactgaaatc acagattatg gtttctttgc tgtgtgcatg
     1021 gatacagaga ataatgcatt tgcattatgg gaaagtaaaa aatagataaa aagtcctact
     1081 tttgatcttt tagaatttat ttagcaacaa atttgcattt aaccttgtaa tagaatacaa
     1141 atttatgtcc tattttacaa ttctatatgt ttataaaaaa tattaacttg actattttat
     1201 aatatacctt tgagtaaact cgaaacgtat ttgagagcta ccacaccctc tcgatcaaga
     1261 ttgggattga atatggtaat atccattcca acactgcgac ttgtggcaac tatgattttc
     1321 aaaagctagc tgagttcatc aaaacttaaa ccacccttta gtcgataatc gactgctggc
     1381 atgattgcat catccaatac atcgacatcg agatgaatcc aaaatccaca tagttcatcc
     1441 ttcaaaatat tcctaacagc ctctgatgca gcggctctaa ttcctagttg tttaatgtat
     1501 gtaagatcaa atgaatgaat attggtattt gaaacatctt gacttccaaa gcttgcagct
     1561 tgttctctat cacgatatcc gaacagaatt atgtcttcat catggacaag tggtttaaga
     1621 ttgtctatat tagttaaaac atctggacct ctaccagata caattgcaag atccatatct
     1681 gcaacctccc cagttaaaga agcttctggt tgataaaaat cagcatggcc gtctataaag
     1741 aataatctat accttcccaa acgtctgagg actaaaagat ttccaatcag gatggtacag
     1801 tcacctccta ataccattgg atatagtctg ctacgaataa cagaagaaac tcgatctgca
     1861 agttgtagcg aaaatgtttt gattgagtca ggatttagta aaagagttac tttatctcgc
     1921 tctgaattat aagacaaaga agaagaaact ttccctgcat aatcggcatt taatttctta
     1981 atcagacctg ctgccttcag tgcttctggt agatattcta ctcctgtagg tcgtaagcct
     2041 agaattgaag gagcatctat aattgtaaat cttgatttca aaattattta cctaatgaca
     2101 atcttaagag aattttcaaa gtctattata aacttattcg taggcgctca aacggaagtg
     2161 tgtgaactga ttttgacaca aatttgtagt tcaggaaata ttgttattat taattcaaat
     2221 tataaaatca aagactaaaa ataatcaacc agttattaag agagaaagac aaggtaaaga
     2281 taatacattg gcttatttat ctgatcaatt acttatcata agtgaaagaa tataacagta
     2341 agcagttaga aagaaaataa attcattgtt ttttggaaat ttattattta ttttatattt
     2401 atttctttta tctatatgta aggtatctca ttcttcatag gtggcatctt cttttatatc
     2461 cacttcacca gtaatacctt tctttttcct cttttttgag atttgatatt tttagaactt
     2521 catctccttt tactcttgca gttgatgagg tatcttcatt ttctgacata tctgaaatat
     2581 ttataatatt atactatcta aaaatatcaa aaaatagagt tcagagggtt tcgaattctc
     2641 atcataacag ggttcggtaa cataa
//
LOCUS       DATIAS010000508         2099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1999551, whole genome shotgun sequence.
ACCESSION   DATIAS010000508 DATIAS010000000
VERSION     DATIAS010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1999551"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(332..1156)
                     /locus_tag="VLA74_10185"
     CDS             complement(332..1156)
                     /locus_tag="VLA74_10185"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF51115.1"
                     /translation="MIKSNKDPLQRIHLSLFIFVLGAILYYSIIMLASVGISPIQLST
                     ATTTSNITSDEVTFFNNKGMSLNSLGKFNESITYFDKALAIDPNNTIALTQKANAFGG
                     LGKYHEAITYYDKVLAIDPKNAEALDDKGVSYYHLGNYTKAIGFYDKALAIDPNHAFA
                     LYDKANALEALGNYTQSLAYFDKALATDPKHVLAMIGKGYALDNLGKHTEAVVYYDKA
                     LATDPRYIPDLTNKANFLDKIGNYNLAIIYFDKALAIDPKNVDALTGKKQSLADKQ"
     gene            1753..>2099
                     /locus_tag="VLA74_10190"
     CDS             1753..>2099
                     /locus_tag="VLA74_10190"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF51116.1"
                     /translation="MEGVPYRTIAKNLGVNYRNVYGWIKKYRESGLDGIRNKRKNGGR
                     KPVISTDKNKEMVKDIVLNKSPQTFGYLKNTWSIRLLAIYLSSLMEMNVSPMQTWRII
                     QDLGIVYKQPKLEL"
BASE COUNT          761 a          303 c          311 g          724 t
ORIGIN      
        1 taaactatta atttatagtt agaaatattg aattcgattg ttttagtaaa ttattttcta
       61 atcaattatt ttacaatttt gtacaagttt ttgtttcttt aatgtttgaa ctacaaaatt
      121 gtgtcaaaat cagttcacac acctccgttt gagtgcctac gaataagttt ataatacttt
      181 agaccatcat ttaatttttt gattaaaaat ttttgttata ttgatgatca gtaatgttga
      241 ctatttgaga gtaacagtgg ataaatgacc attattttat cataagcttt tttgatgaaa
      301 atatttactt tagcaaaaaa tgtaaaaatg attattgttt atcagcaaga gattgttttt
      361 tacctgttaa tgcatcaaca ttctttggat ctatagctaa agccttgtca aagtagatta
      421 tagctagatt gtaatttcct attttatcaa gaaaattagc tttattagtt aaatcaggga
      481 tatatcttgg atcggtagct aaagccttgt cataatagac tactgcttct gtatgtttcc
      541 ccaagttatc aagagcatat cctttaccaa tcattgcaag aacatgtttt ggatctgtag
      601 ctaaagcctt gtcaaagtaa gcaagagact gtgtatagtt tcctaatgcc tcaagagcat
      661 tagctttgtc atatagtgca aaagcatggt ttggatctat agctaaagcc ttgtcataga
      721 agccaatggc ttttgtataa tttcctaaat gataataaga tactcctttg tcatctagtg
      781 cttcagcatt ctttggatct atagctagca ctttatcata ataggtaata gcctcatggt
      841 attttcctaa cccaccaaat gcattagcct tttgagttaa tgcaatagta ttgtttggat
      901 ctatagctaa agccttgtca aagtaggtta tagactcgtt aaatttacct aaactattaa
      961 gtgacatacc tttattatta aaaaaggtaa cttcatctga tgttatatta gaagtagtag
     1021 tagctgttga taattgtatt ggcgatattc ctaccgaagc taacataatt atagaataat
     1081 aaagtattgc tcccaataca aaaataaata atgataaatg tattctttgt aaaggatctt
     1141 tattgctttt tatcataata gtattgttga aaaagaaagt ataatattaa tagttttagt
     1201 aaacatacaa accatatatg gctgactctt aactatatca attaacatat atttcaataa
     1261 aagatttaac aactattttc aaaatatatt ataataaaaa ctcaaagtca caagtaacat
     1321 aaaatttata atattatgtt accgatccca attacatgtc atgctcgaag ccctcagaac
     1381 ccttactatg atactaaatg ttttcaacaa tatcctcttc ttatataaga taacatacca
     1441 acggtaaaat tattcagtca tagatagaat tatattgaat tgttcttaaa atcctcaaga
     1501 ttagataatg ttaaagattt taaatttttt attttgtatt aagtctctaa tcttttatca
     1561 acattgttct atccatttag cataaatata gaaatggatt tagctttgtt atataatcta
     1621 tcaatatgtg ccaaataacc ctgttagact agaattatct actgtccaga aaaaggagtt
     1681 attttcattc atgaagaata ccaaggacaa agaggaatac agagaagagc atcatcagca
     1741 ataaagcaaa agatggaagg agtaccttat agaacaatag ccaaaaacct tggtgtcaat
     1801 taccgtaatg tgtatggctg gattaaaaaa tatagagaat ctggtctgga tggaataaga
     1861 aataagagaa agaatggagg tagaaaacca gtaatatcta ctgacaagaa caaggagatg
     1921 gtaaaagaca tagtattgaa caaatcaccc cagacttttg gctatctcaa aaatacatgg
     1981 agtatcaggc tgttggccat atatctttcc tcactaatgg aaatgaatgt cagtccaatg
     2041 caaacatgga gaataattca agatttaggc atagtataca aacaaccaaa acttgaact
//
LOCUS       DATIAS010000509         2652 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1317137, whole genome shotgun sequence.
ACCESSION   DATIAS010000509 DATIAS010000000
VERSION     DATIAS010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317137"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..849
                     /locus_tag="VLA74_10195"
     CDS             <1..849
                     /locus_tag="VLA74_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51117.1"
                     /translation="EKLENDDETSIFPKKVGIVFIDDVSDSKKTLKNNLKKLSLKIKS
                     EKGNKPHLPFDQIACAHLLLQMNKVQDIFDFQIVRLRFPDQLSYSVNKYDLKWFTHQI
                     STFESSEEGKKYNIDYWIVITSDKIENNLYYIEEEKPRKAITTSLNWEGVNSPPSLFE
                     YLSISVLMCRLYFINREFYGRLGSHPMLLTKGCIYDFTIFKPDRRILVSNPYLCSICR
                     KQMKNLEDIIHNNTSKNIKLCEGINKILAREWMGDAEKKDSPLYNIKKNYGYDINRNS
                     GFNKKW"
     gene            1316..2047
                     /locus_tag="VLA74_10200"
     CDS             1316..2047
                     /locus_tag="VLA74_10200"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HSF51118.1"
                     /translation="MGRKDWDYIGVPKLLVKRLENFLKTSHAKKSGIFNKSEFLRNAI
                     IKYLEEQEKHLNNIDSIDDFIFEMKEGDHILVTYNNNQELSEIVISSLKRSIDKNQLF
                     VLFISKQQEEIFVHAMEKIGDITTLYNKQDIIIIYTDDHYVEGKYSMDSIFAKFNEIK
                     QLTQRNSKSGINIIATIAGDLFTKQKYDDAISIESKCHRSMTVFDIPVTMLCLYKSIP
                     EEFEDISLENHDVVLKRIVTKTGIS"
     gene            2167..>2652
                     /locus_tag="VLA74_10205"
     CDS             2167..>2652
                     /locus_tag="VLA74_10205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51119.1"
                     /translation="MNSQKIITNLILALIAISIITTTNIYENIQGEESLKAVVHSYAQ
                     QNEKTQNLTETNIPKVLPLVRGFADGNEVFYITTEVSDEKLANYLTNLTNSRVVYTPA
                     LKYAPPQSLANIYEFTNGIKGSGPEGFQPNVADSQPGDNNYSPLWKVNLVTWNNGTTP
                     RE"
BASE COUNT         1076 a          343 c          371 g          862 t
ORIGIN      
        1 gagaaattag aaaatgatga cgaaactagt atctttccca agaaagttgg tattgttttc
       61 attgacgatg tttcagattc taaaaagaca ttaaagaata atttaaaaaa attatcgttg
      121 aagataaaat ctgaaaaagg aaataaacct catctaccct tcgatcaaat tgcatgtgct
      181 catcttttac ttcaaatgaa caaagttcaa gatatatttg atttccaaat agtaagacta
      241 agatttcctg atcaactatc ctattcagta aacaagtatg atcttaaatg gtttactcat
      301 caaatttcta cgtttgaaag ttctgaagaa ggcaagaagt ataatataga ttattggata
      361 gttataacct cagataaaat tgagaataat ttgtattata ttgaagaaga aaagcctcgt
      421 aaagcaataa ctacttcttt aaattgggaa ggagtgaatt ctcctccttc attatttgaa
      481 tatctttcta taagcgtttt aatgtgtagg ttatatttta ttaaccgtga gttttatgga
      541 agactaggtt cacatccaat gttgctaaca aagggatgta tatatgattt tactattttc
      601 aaacctgata gaagaatcct tgtatcaaat ccttatttat gttctatttg tagaaaacaa
      661 atgaagaatt tagaagatat catccataat aacacatcaa agaatataaa attatgtgaa
      721 ggtatcaaca aaattcttgc tagagaatgg atgggtgatg ctgagaaaaa agattctcca
      781 ttatacaata taaagaaaaa ttatggttat gatataaacc gtaatagtgg tttcaataaa
      841 aaatggtagg aaacaattag agacagcatt cttgaaaata ctgctcaatg gatattggga
      901 acactagtat ctggtatcat tacaggaata ttgattctat tacaagtacc aacaaaatag
      961 aaaaatatta gtaaaatata atcctataat acataattat tattttttaa tattgtatca
     1021 atttactaca attttgtagc tatttcagtg ggatgtgaaa ctaacttgac ctaaattttg
     1081 gccccactta aaatcttata aattcaaaat ataagttgct ataaaaataa ataattgact
     1141 tctcaaattg ttttattcta aaagtaacta caaatataaa ttcatgtaat tcatagtgaa
     1201 gcgacttaat gagttttgat gataatatta aattttattt atgagtcatt catttttttc
     1261 atataaataa tagcaagaat ttataacact ttgagctata actatatcat caaaattggg
     1321 tcgtaaagat tgggattata ttggagttcc taaactttta gtaaagagat tagaaaattt
     1381 tctaaaaact tcacatgcta aaaaatcagg gatatttaat aaatctgaat ttttacgtaa
     1441 tgcaataatt aaatatttag aggaacaaga aaaacatctc aataatatag actcaattga
     1501 tgattttatt tttgagatga aagaaggaga tcatatttta gttacatata acaataacca
     1561 agaattatct gaaatagtta tctcatctct gaaacgaagt atcgataaaa atcaattatt
     1621 tgtattattt atatcaaaac aacaagaaga aatatttgta catgctatgg aaaaaatagg
     1681 tgatataact actctatata ataaacaaga tatcataata atctatacag atgatcatta
     1741 tgttgaagga aagtattcca tggattctat ctttgcaaaa ttcaatgaaa ttaaacaact
     1801 cacacaaaga aattcaaaat ctggaataaa tataattgca acaatagcag gagatttgtt
     1861 taccaaacaa aaatatgatg atgctatatc cattgaatca aaatgccata gatcaatgac
     1921 cgtatttgat attcctgtta ctatgttgtg tctctataag tcaataccag aagagtttga
     1981 agatataagt ttagaaaatc atgatgtagt tctaaaacgt attgttacca aaacaggtat
     2041 tagttagatt aatcatattg aaaaagataa ttaagataaa ataaatctaa attttaataa
     2101 tcttacagta accttacagt aagtattaaa ttttatatat gaatacataa acgttgcttt
     2161 ttagacatga attcacaaaa aatcataaca aatttgatac ttgctcttat tgcaatatca
     2221 attattacaa caacaaacat ctatgaaaac atacaaggag aagaatcatt aaaggcagta
     2281 gtacattctt atgcacaaca gaatgaaaaa acacaaaatc ttactgaaac aaatattcca
     2341 aaagttcttc cactagttag aggttttgca gatggtaatg aggtatttta tattacaaca
     2401 gaagtatcag atgaaaagtt agcgaattat cttactaatc taactaattc aagagttgta
     2461 tatactccag cattaaaata tgcaccacca caatcacttg caaacatata tgaatttact
     2521 aatggaatta aaggaagtgg cccagaagga tttcagccaa atgttgcaga ctcacaacct
     2581 ggagataata actattcacc attatggaaa gttaatcttg taacatggaa taatggcaca
     2641 acgccaagag aa
//
LOCUS       DATIAS010000510         3611 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_910281, whole genome shotgun sequence.
ACCESSION   DATIAS010000510 DATIAS010000000
VERSION     DATIAS010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910281"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..711)
                     /locus_tag="VLA74_10210"
     CDS             complement(199..711)
                     /locus_tag="VLA74_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51120.1"
                     /translation="MKKLNWKIFENLLLKTVIAAIFFLSFILGLTFLYSDVYGFSPTL
                     KTELLTNKIENYIYYSPNDGYNNTLNNLEKNIDLDRVYVTSNGTHLEIKLLFNGFLDI
                     LKNILLNNSTVTQNLFINIFIDSDDDETTGFLGYNYGYLLTHNISNSYNDDDNNLNPI
                     ANLQGSTQII"
     gene            complement(857..2413)
                     /locus_tag="VLA74_10215"
     CDS             complement(857..2413)
                     /locus_tag="VLA74_10215"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSF51121.1"
                     /translation="MNDNIDFSNSNKETELKCSLCKEPLRTEKDEEIIQKVIDGSKYF
                     FHAQKCFSRYKRLEDFYGKNIKNFIGNTQFFVFDTFLDKAIPTSDEIQEIKKNNNKSS
                     KPILKVIKNPEETIRTAINLVQSAEDEVLLLFSSANGFYRRMILGDGFLTLQRLQDTT
                     KGNIIVRILTPFDKKIVDAVNRLKAKGVHIRYLPEALYLTVTFLIVDRKFSMTAELVN
                     DYTESPAESLGLSTFSNSKVTVLYYISMFENLWKQSDLYEKTENLYEKLKKTNETQIQ
                     FIKETAHEIRNPIQSILGLAQVMLSNKNLDPGHIEDLLRIIIKNAKKIKFLTDNILDA
                     ARIDSQLLTLNMEKFDLVESVKDLLKDLNNQIQNKKISLILKCNEEYSLDPLYFSIKR
                     DSDLKLEFSILLVADKLRLNQVFLNLINNAINVAQEGEIIVFLERQDNNNTVLVRITD
                     DGPGIPSNIKDKIFTKFVTGSKSGTGLGLYICKNIIEKHGGKIWAENNKNKGANFNFT
                     IPMTSQSSKQ"
     gene            complement(2645..3202)
                     /locus_tag="VLA74_10220"
     CDS             complement(2645..3202)
                     /locus_tag="VLA74_10220"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF51122.1"
                     /translation="MEKPNQMVQMDILGPFYLQNCAQKNYFISCEDDCSRKTVSEWSE
                     RKRSIDVLDVLEDYIVENGKPNKVMHDNGKQFKSKIFRRFLKKNNIKDKSIPARYPQL
                     QGKIEAYNKIVKNEFLAVENIPNVEEGKRRYFMFVKAYNEEREHGDINGYTPYEMFLM
                     KGTRLNNSSNKKKIKQIKSVTHVGK"
BASE COUNT         1100 a          559 c          484 g         1468 t
ORIGIN      
        1 taatctttaa tccatctgga ataactgata aatatttttt attgagtttg gaggtaaaga
       61 acagtggttg aaagtcatag tctaagagtt catatcctct tattatccag tcaagttttt
      121 caactatatt tttagaattt aatgttcttg ttattatctc ttctagttct ttaccctcca
      181 gaatattatc agtttgattt aaataatttg tgtagaaccc tgtaagtttg caataggatt
      241 taaattatta tcgtcatcat tataagaatt tgaaatatta tgtgttaaca aatatccata
      301 attataacct aagaatcctg ttgtttcatc atcatcagag tcgataaata tgttaataaa
      361 aagattctgt gtaacagtac tattatttaa caatatattt ttaagtatat ctagaaaacc
      421 attaaataat aattttattt caaggtgggt accattactt gttacataaa ctctgtctaa
      481 atcgatattt ttttctaaat tgtttagagt attattataa ccgtcatttg gactgtaata
      541 tatgtaattt tctattttat tagtgagtaa ttcggttttc aatgtaggag aaaagccata
      601 tacatcagaa tataaaaaag taagacccaa tataaaagaa agaaaaaaaa tagcagcaat
      661 tacagttttc aatagtaaat tttcaaatat cttccaattt aattttttca tctttctatt
      721 aaatttagaa tctatctagc taaaatatac attatgactc tcgtaatgac tgtacgccaa
      781 atccatctta taagaggtta gagtatgaat aagacatgta gtcaataaag atcatattca
      841 gcatttgata tatcttttat tgcttacttg actgagatgt cataggtata gtaaaattaa
      901 aatttgcacc tttgttctta ttgttctccg cccatatttt tccaccatgc ttttctataa
      961 tatttttaca aatgtagaga cctaggccag ttcctgattt tgagcctgtt acaaatttag
     1021 taaagatttt atcctttata tttgatggaa tgcctgggcc gtcatctgtt attcttacca
     1081 atacagtgtt gttgttgtct tgtctttcta aaaatacaat tatttctcct tcttgtgcca
     1141 catttatagc attattgata aggtttaaaa aaacttgatt taaacgcaat ttatctgcaa
     1201 ccagcaaaat tgaaaattct aattttaaat cggaatctct ctttattgag aagtataaag
     1261 gatcaaggct gtattcttca ttgcatttta aaattaaact aatcttttta ttttgaattt
     1321 ggttattcag atcttttagt aaatctttta ctgactctac aagatcaaat ttttccatat
     1381 taagagttaa aagttggctg tcaatacggg cagcatctaa gatattatct gtaagaaact
     1441 taattttttt agcatttttt ataatgattc tgagtaaatc ttctatatga ccaggatcaa
     1501 ggttcttgtt agaaagcata acttgtgcaa ggcctaagat agattggatt ggatttcgaa
     1561 tctcgtgtgc tgtttcttta ataaattgta tttgtgtttc atttgttttt tttaatttct
     1621 cataaagatt ttccgtcttt tcataaaggt ctgactgttt ccacaggttc tcaaacatag
     1681 aaatataata taataccgtt actttactat tagagaaggt tgagagccct agcgattcag
     1741 caggagattc tgtataatcg tttactagtt cagcagtcat agagaatttt ctatctacta
     1801 tcaaaaatgt gaccgttaaa tacaatgctt ctggtaaata tctaatatgt actcctttag
     1861 cctttaatct gttaactgca tcaacaatct ttttatcaaa aggagttaga attctcacta
     1921 ttatgttacc tttggtagtg tcttgtaacc tttgcaaagt aagaaaacca tctcccaata
     1981 tcattctcct ataaaacccg tttgctgaag aaaaaagtag taatacttca tcctctgcag
     2041 attgaacaag attaatagca gttcttattg tttcttcagg gttcttgatt actttgagga
     2101 ttggtttact ggatttatta ttattttttt ttatttcttg aatttcatct gaagtaggaa
     2161 tggctttatc caagaaagta tcaaaaacaa aaaattgtgt atttccaata aaatttttaa
     2221 tatttttacc ataaaagtcc tccaatctct tgtaccggct aaaacatttc tgagcatgaa
     2281 aaaagtattt agagccatct attacttttt gaatgatttc ctcatctttt tcagtacgca
     2341 ggggttcttt acacaaggaa cattttaatt cagtttcttt gttggaatta gagaaatcga
     2401 tattgtcatt cattttttca taataattag aatattttgt atctaataaa ttatatccaa
     2461 atataatgtc atatgcaagt atattatttt caatattttt ataaaatgta tctatatctt
     2521 ttatagtata atctgaaaaa tattttaaaa cttgttgtgt aggcttgtta tttaattgct
     2581 tattagaagt tatattgaga tttttataac ctaattgttg tacttacata cataggtaac
     2641 agattcactt accaacatgg gtaacacttt ttatctgctt aattttcttt ttattactgg
     2701 aattatttaa tcttgttcct ttcataagaa acatttcata tggagtgtaa ccattgatat
     2761 ctccatgttc tctttcttca ttatatgctt taacaaacat gaaatatctt ctctttcctt
     2821 cttctacatt gggtatgttt tctactgcca gaaattcatt tttgactatc ttgttatacg
     2881 cctcaatctt tccttgtagt tgtggatatc tggcaggtat ggatttgtct tttatattgt
     2941 tcttttttag gaaacgtctg aatattttgg atttaaactg ttttccattg tcatgcatta
     3001 ccttgttagg tttaccattt tccacaatgt aatcttccag tacatctaaa acgtctatac
     3061 tcctctttct ttcagaccat tcacttactg tctttcttga acaatcatct tcacaactga
     3121 taaaataatt cttttgagca caattttgaa ggtaaaatgg tcctaaaatg tccatctgta
     3181 ccatttgatt gggtttttcc attgcaaacc ttttgtattt tctatttctg attttacatt
     3241 tcaatatgtt cagaccatca tgtcttttca gtaccttgta tatggttcct gtactgagtg
     3301 atatctgctt cagacgcttt aacctaaatc taatacgatt gcatccaaac ctctttgtta
     3361 tacgtaaatc cagtatttcc tgttctatcg catttgttac ctttgcaggt tgaatattgt
     3421 gtggttttct acttttatcc tgtagaccat ctattccata ttttaggtat ctgttcttcc
     3481 acttgtagta tatctttctg gatatctgat atcgtatgca gatgtcagtt acagtatctc
     3541 cagtccattc tttctcatgt attaaattaa attttgtttg taattctatt tttcatacac
     3601 ttcctattag c
//
LOCUS       DATIAS010000511         3452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_92142, whole genome shotgun sequence.
ACCESSION   DATIAS010000511 DATIAS010000000
VERSION     DATIAS010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92142"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VLA74_10225"
     CDS             <1..191
                     /locus_tag="VLA74_10225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51123.1"
                     /translation="PHLNLIEVRWMWLQRKAINNSTFRNESDIGKAVSDWTCNYNNSH
                     HGSITRDSLHNELMCLFT"
     gene            complement(361..1986)
                     /locus_tag="VLA74_10230"
     CDS             complement(361..1986)
                     /locus_tag="VLA74_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51124.1"
                     /translation="MSETTEDYEFEFLAGFRADIVGYTDTDEESIIRIKQQIFSESIA
                     KCKTYHELINDVHFEERVGDDIIIIVPTNKIVKLIHFAEELTENLVNESQSKREQREE
                     FIDDVKVRIGIHVGNGFVKKDSTDNNKIISITGNIMIYLKRVTDIGSTGDILLTEGAV
                     NTIFALTTQYKGNLYDAGRYPIKHGKYLHIWYYKNGNIGNPIPPKRKKLPLIKHLTKR
                     NYLLALSLIIISGLGFSLGLVTLLDNNNTTEVNNIKTIIQDEIQDKYLKLNQDKKLIE
                     NLLQQKIDEINTSQQQQIALSTTLTPQLKNELNSMLTGISEEGGIKYSWISKIRPELC
                     TITLYKPYDRDFINTTDFRKKPWCNDLNYYDTYLTETYYASGPHDFVNTLVSEINIKL
                     PDGKSKTIGYLGKALEWNDIIPPLLASNSKPRLILVDNEGYIAFDCTFLGCKDLDNYR
                     STVIDQKPLVFNSSYTGNSFGLSSFERVNMENKLGNNNNILGNWTLYLLSEKFYEIMN
                     YLIFDSISVIFGLIIYYYLIPRNWLDGIIKDNK"
     gene            complement(2167..3009)
                     /locus_tag="VLA74_10235"
     CDS             complement(2167..3009)
                     /locus_tag="VLA74_10235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51125.1"
                     /translation="MNNNNLFYSESLKNIFFIFGNEYRLKIIDVLFNKKRLTMTKLAI
                     ELGTELSTIQNYVEYLLQNKIIEKDQKGNYKLTNLTELLVKQIPSFTFLINNQEYFKE
                     HDFGDLPIHFINRISDFSNSTIIRGYPLIHEKICDMYENCTEYIFNILHEVDYSKDIL
                     DLLESKLKKDDRFVTKTIFSQYPIIPEKYKKIIENYNFSHYKLNNQIQQKAINEVKIS
                     LILTDKESILMLPRIEKLVTDTTTILYSDDKNFHKWSFDYFSELWNNARNFDLNVYIK
                     SRKV"
     gene            3224..>3452
                     /locus_tag="VLA74_10240"
     CDS             3224..>3452
                     /locus_tag="VLA74_10240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51126.1"
                     /translation="MIKSCKIEFYNYSKYSYVQLREYLSVFLIQISLIVGISAILLGN
                     GDGIDGVGQQITYAQLTTSSNGYPEGHPLAPP"
BASE COUNT         1166 a          495 c          432 g         1359 t
ORIGIN      
        1 ctcctcacct gaatctaata gaagttagat ggatgtggtt acagagaaaa gcaattaaca
       61 actctacatt tagaaatgaa tctgatattg gaaaagcagt atctgattgg acatgtaact
      121 acaataactc tcatcatggc agtataacta gagatagttt acataatgaa ctcatgtgtt
      181 tgttcacatg acttttaact gtcgtcttgc ttgagcctcc ttcttttctc tattgttatt
      241 gtattgataa aacatgtata tgaacccgaa tacataacgg gcccatcggg ttgcgaggca
      301 tttttgcctc tatttgtaat atattatgct gagaatatca tattctcaaa attgtacatc
      361 ttatttatta tctttaataa ttccatctaa ccaatttcta ggaataagat aataatatat
      421 tattaatcca aaaataacac ttatagagtc aaaaatgaga taattcataa tttcataaaa
      481 tttttctgac aacaagtata aagtccaatt tcctaaaatg ttattgttat tacctagttt
      541 attttccata tttactcttt caaaagaaga caagccaaat gaatttcctg tatatgaaga
      601 attaaagact aaaggttttt ggtctataac tgtactacgg taattatcta aatccttaca
      661 tcctaaaaag gtacaatcaa aagcaatgta cccttcatta tctactaaaa tcaatcgtgg
      721 tttactatta cttgcaagca atggaggtat aatatcattc cattccaaag ccttacctag
      781 atatcctata gtttttgatt taccatcagg taacttaata tttatttctg atactagtgt
      841 atttacaaaa tcatgtggcc cactagcata atatgtttct gttaaatatg tatcgtaata
      901 attaagatca ttacaccatg gtttttttcg aaaatcagtc gtatttataa aatcacgatc
      961 atatggttta tagagagtta ttgtacataa ttctggtcta attttagata tccaagaata
     1021 ttttatacca ccttcttcac ttatccctgt aagcatggaa ttcaattcat tttttagttg
     1081 aggtgttaga gttgtactta atgcaatttg ttgttgttga cttgtattga tttcatcaat
     1141 tttttgttgt agaagatttt caattaattt tttgtcctgg tttaatttaa gatacttatc
     1201 ttgaatttca tcttgaatta tggtttttat attatttact tcggttgtat tattattgtc
     1261 taacagagtt actaatccca aactaaatcc caatccagat attataatta atgataaagc
     1321 gagtagataa tttctttttg ttaaatgttt tattaaaggt aatttttttc tttttggagg
     1381 tataggatta cctatattac catttttgta ataccaaatg tgtagatact tgccatgttt
     1441 aattggatat ctacctgcat catataaatt gcctttatat tgagtggtta atgcaaaaat
     1501 ggtattaact gcaccttctg ttaatagtat atcacccgta gatccaatat cagttactcg
     1561 tttgagataa atcataatgt ttccagtaat ggaaataatt ttattattat cagtactatc
     1621 ctttttaaca aatccattac ctacatgaat tccaattcta actttgacat catcaataaa
     1681 ttcttctcgc tgttctcttt tagattggga ttcatttact agattctcag ttaattcttc
     1741 tgcaaaatga ataagtttta ctatcttatt tgttggtaca ataataataa tatcatctcc
     1801 cactctttct tcaaaatgaa catcatttat caattcatga tatgttttgc atttggctat
     1861 ggattcagaa aagatttgtt gtttaattcg tataatactt tcttcatcag tgtcagtata
     1921 tcctacaata tctgctctaa aacctgcaag aaattcaaat tcataatctt cagttgtctc
     1981 agacattagg tattatctcc taaatcctaa tgatgagaaa tggtacaaat cttgttggat
     2041 aagtaatatt attattaaaa agacaatttt gtcttttatt atagatattc ttcaaactaa
     2101 tggtattcat tttttattat taatctctat ataaatttta attggtattt tacctattaa
     2161 taggatttat accttacgag atttgatata tacatttaaa tcaaaattgc gagcattatt
     2221 ccacaattca ctaaaataat caaacgacca tttatgaaag tttttgtcat cactataaag
     2281 aattgtagtg gtatctgtta ctaacttttc tattctaggg agcatcaaga tagattcttt
     2341 atctgttaaa attaacgata tttttacttc atttatcgct ttttgctgta tctgattatt
     2401 gagtttgtaa tgtgaaaaat tatagttttc gattatcttc ttatattttt ctggaattat
     2461 tggatattgc gaaaagatag ttttagtaac aaatctatca tcttttttta actttgattc
     2521 taataaatct agaatatctt ttgaataatc tacctcatgc agtatattaa aaatatattc
     2581 agtacaattc tcatacatat cacaaatttt ttcatggatt aatggatatc ctctaattat
     2641 tgtactattt gagaaatcag atattctatt aataaaatgt ataggaaggt ctccaaaatc
     2701 atgctcttta aagtactctt gattatttat taaaaaggta aatgaaggaa tttgttttac
     2761 caatagttct gtaaggttgg ttaacttgta atttcctttt tgatcttttt ctataatttt
     2821 attttgcaat agatattcta cataattttg aatagtagaa agttctgttc ctaattcaat
     2881 tgctaattta gtcatggtta atcttttctt gttaaaaagt acatcaatta tttttaagcg
     2941 gtattcattg ccaaaaataa aaaaaatatt tttcaaagat tcagaataaa acaaattatt
     3001 attattcatc tataatacac taaaatcaaa acgttatatt aataacttat tagatgtttt
     3061 atctacaaat agatggattt cctatcaatc cttatctttt aattctttta caagaaaagg
     3121 tatgaagaat cttaatagga taaagtttca tactaacgaa aaatacaaaa agcaaacagt
     3181 gtcattaaaa aattgtttat ccaaaatata ttatataacc aaaatgataa aatcatgtaa
     3241 aattgaattt tataattata gcaaatatag ttatgtacaa ttaagagaat atctttctgt
     3301 cttcttgata cagatatcat taattgtagg tatttctgct attttacttg gaaatggtga
     3361 tggtattgat ggtgttggtc aacaaattac atatgctcaa ttaactacat cttccaatgg
     3421 atacccagaa ggacatcccc tagcaccgcc tc
//
LOCUS       DATIAS010000512         3539 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1454929, whole genome shotgun sequence.
ACCESSION   DATIAS010000512 DATIAS010000000
VERSION     DATIAS010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3539
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1454929"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VLA74_10245"
     CDS             complement(<1..525)
                     /locus_tag="VLA74_10245"
                     /inference="COORDINATES: protein motif:HMM:NF014646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing protein"
                     /protein_id="HSF51127.1"
                     /translation="MVYIRIKKVKNIDYAYIVESRWNKEKRTSQQITRQYLGPLSQIN
                     INKIPEEYRNESTIIKFLDSHNLNFEKSMELNESLQYILFEKLKNYELDELINIYIDY
                     TKSVYSLLDFYEKLLIPVLYKIGDQWANGEIDVATEHVCSNATITLIDLINQKNINKK
                     IPESSSTNRPIILCT"
     gene            complement(720..2930)
                     /locus_tag="VLA74_10250"
     CDS             complement(720..2930)
                     /locus_tag="VLA74_10250"
                     /inference="COORDINATES: protein motif:HMM:NF013275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSF51128.1"
                     /translation="MKPLYFFLCVIFTIAVGNSVIIFAESDSKIIYSNWVLILNSLIA
                     AALSSYILLKNRESIVGNKENILLTIGLVFWFIANIIWAYYEIVLDIVSPVPSSADFF
                     LLSAYVFLIYRLMIIRKNLSHIIDKKIMFLIISITGLFLIYILNLTVDLAQTSNFRGM
                     MLFLVTIAYPTLNSILTILAITILLGIKNDKHHHLVPWVCELVGFLAIVVGDSWFAII
                     VLTTFVEQLWISTLLLSAHYLLIAGGLIWYLRYSIKWKSKDLIFKIVVGIKKSKLANK
                     IIFTSITIISLLLFSGFYLGNGFGGDEKNSFLIKKNHITEKVLPSTTTIAATAAFRQQ
                     DFYKEFVVGAIIPFTGSYSSIGKPVKVALEKAEYDVNEYFEKMNYSSRFNLIMANSKT
                     NPNDSLAAIKELHSLGAKIIVGPATSTAVSAVKDYADQNDIILISYSSTSPLLSIKDD
                     NLLRLIPDDINQGKVIAERLIDDGIKVVVPIWRGDIYGNELYQSTKYHFEKLGGKMVE
                     GINYKPHTGKFAASLHRINFIMWNEDLERLNNLVSDAIKKYGNESIGVFIISYDEITP
                     ILIQSSIYHSLGDIRWYGSDSIAQNHHITKNIDSALFAIKTNFSNPLYSIDTKSLKIH
                     ELIETLEEELHDGGESITYPAIAYDSFWISSLSLDKNSTTSSYLDSKNIQKSFKDIVI
                     ETAESFDDGISGKIQLNDAGDRIGENYDFWSVSKDAQKSHYIWKSENVQVGLNH"
     gene            complement(3020..3445)
                     /locus_tag="VLA74_10255"
     CDS             complement(3020..3445)
                     /locus_tag="VLA74_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51129.1"
                     /translation="MKKDNSWFRRRWLDFRQGHSIYLVFIMTFANFITIQYKIFLEKV
                     PAVDTLTGGSIFGFAIFFIALYVPLSIIIGFWHRKSQWKVEAEALFKENKIGATMWLF
                     VIDLIDGKITEKEKQDMREMLLKITKGKGKSIKDDKTVN"
BASE COUNT         1181 a          547 c          473 g         1338 t
ORIGIN      
        1 agtacataat attattggtc tattagttga tgaactttct ggaatttttt tattaatgtt
       61 tttttggtta attagatcaa ttaaagtaat ggttgcatta ctgcatacat gttctgttgc
      121 aacatctatt tctccatttg cccattgatc acctatctta tataatacag gtatcaataa
      181 tttctcataa aaatctaata atgaataaac agatttggta taatctatat atatattgat
      241 taactcatct agttcataat tttttagctt ctcaaacagt atatattgta atgattcatt
      301 taattccatt gatttttcaa aattaagatt atgggaatct aaaaatttta taattgttga
      361 ttcattccga tattcttctg gaattttatt gatatttatt tgtgatagag gacctaaata
      421 ttgtctagta atttgttgag atgttctttt ttctttattc catctacttt caactatata
      481 tgcataatca atatttttta ctttttttat tctaatatat accatatagt atgtatttat
      541 tcactttctg tttataacct aactcctagt tataatctat agtgccaact ataaaattag
      601 ttactattat aatatttttt tagtaatata ttgttgaatt aaaataatag taattcattt
      661 tcttataaat ttcttataca aataacattt aatttctatc tttacttcaa aattatcctc
      721 taatgattta atcctacttg aacattctct gatttccata tataatggct tttttgagca
      781 tctttagaaa cactccagaa atcataattt tcaccaatac gatctcctgc atcattaagt
      841 tgtatttttc ctgaaatacc atcatcaaaa gattccgccg tttcgataac aatatctttg
      901 aaagatttct gaatattttt tgagtcgaga tagctactag tagtactatt tttatccagg
      961 cttaaagaag aaatccagaa agaatcataa gctattgcag ggtaagttat agattctcct
     1021 ccatcatgta gctcctcttc aagtgtttct attaactcat gaattttgag agattttgtg
     1081 tctatagagt ataacggatt agaaaaattg gttttaattg caaatagtgc agaatctata
     1141 ttctttgtaa tatggtgatt ctgagctata ctatcacttc cataccatct gatgtctcca
     1201 agtgagtgat aaatagaaga ttgaattaag attggtgtta tttcatcata agatattata
     1261 aaaactccta tagattcatt gccatatttt tttattgcat cagatacaag attgtttaat
     1321 ctttctagat cttcattcca catgatgaaa ttaattctat gtaagcttgc agcaaattta
     1381 cctgtatgcg gtttatagtt tatcccctct accatttttc cacctagttt ttcaaaatga
     1441 tatttggtag attggtaaag ttcatttcca tagatatcac ctctccatat tggtacaacc
     1501 acttttattc catcatcaat cagtcgctct gcaataacct ttccttgatt gatatcatct
     1561 ggtatcaatc taagtaaatt gtcgtctttt atagaaagta atggagaagt actcgaataa
     1621 ctgatgagta ttatgtcatt ctgatcagca taatctttta ctgctgaaac cgcagtactg
     1681 gttgcgggac caacaatgat ttttgctcca agggaatgta gttcttttat tgcagcaagt
     1741 gaatcattgg gatttgtttt agaatttgcc atgatgagat tgaaccttga tgaataattc
     1801 attttttcaa aatattcgtt aacgtcatat tcagcttttt ccagagctac ttttactggt
     1861 tttccaattg acgaatagga acccgtaaat ggtataattg ctcctactac aaattcttta
     1921 tagaaatcct gttgtctgaa agcagcagtt gcagcaatag tagtagtaga aggtaatact
     1981 ttttcagtaa tatggttctt cttaattaga aatgaatttt tttcgtcacc tccaaatcca
     2041 ttaccaaggt aaaagcctga aaacaaaaga agagaaataa tagttattga agtaaaaatg
     2101 attttattag caagtttgct cttttttatc ccaacaacaa ttttgaagat aaggtctttt
     2161 gatttccatt taatggaata tcgtaaatac cagataagtc caccagcaat tagtaaataa
     2221 tgggcagaaa gcaacaaggt agaaatccaa agttgttcta cgaatgttgt aagaactatt
     2281 attgcaaacc agctatcgcc tactacaatt gctaagaaac ctactaactc acatacccat
     2341 gggaccaaat gatgatgttt atcattttta ataccgagaa gaattgttat ggcaagaata
     2401 gtcaatatcg aatttagagt aggataagca atagtgacaa gaaagagcat cataccccta
     2461 aagttggatg tttgagctag atccactgtt agattcaaaa tatatatcaa gaataatcca
     2521 gttatggata ttattagaaa cataattttt ttatcaataa tgtgactaag attttttctt
     2581 attatcatta atctgtaaat taaaaagaca tatgcagaca acaagaaaaa atctgcgcta
     2641 gatggcacag gagatacaat atccaataca atttcataat atgcccatat tatatttgca
     2701 ataaaccaga aaacaagtcc tattgttaaa aggatatttt ctttattccc gacaatactt
     2761 tccctatttt tcagaagaat ataagatgag agtgctgctg caattagaga atttagaata
     2821 agcacccagt tagaatatat tattttactg tcagactctg caaaaattat aactgaattt
     2881 cctacagcaa tagtaaaaat gacacataga aaaaaatata gcggtttcaa ttattatctc
     2941 tttttttatt atgaatatcc aaatatcatc gattataaaa tcttttttgg ttagaagata
     3001 tacaattaat ttaacatagt tagtttactg ttttatcgtc tttgatagat tttccttttc
     3061 cttttgttat ttttaacaac atttctctca tgtcttgctt ttctttttca gtgatttttc
     3121 catctataag gtctataaca aataaccaca ttgtagcacc aatcttgttc tctttgaaaa
     3181 gagcttcggc ttcaactttc cattgacttt ttctatgcca aaatccaata ataattgaaa
     3241 gtgggacata taatgctata aaaaatattg caaacccaaa gatacttccg ccagttaatg
     3301 tatcaacagc gggaactttt tctaaaaata ttttatattg tatagttata aaattagcaa
     3361 atgtcattat aaaaacaagg tatatactgt gtccttgtct aaaatccagc catcgtcttc
     3421 taaaccaact attgtctttt ttcaaaatat tatattatta ttagcactat tggtttagat
     3481 aattgtttac ttgtgagatt tgttaacttc tattatctta attctgcgaa aatatctgc
//
LOCUS       DATIAS010000513         2430 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_637375, whole genome shotgun sequence.
ACCESSION   DATIAS010000513 DATIAS010000000
VERSION     DATIAS010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_637375"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VLA74_10260"
     CDS             complement(<1..342)
                     /locus_tag="VLA74_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSF51130.1"
                     /translation="MSKINNQKIIKNMEQPKKDPSDSDSDNVINKNSIRSVLRVVKSQ
                     ITQDGEGVTLNRSFPNNFISEFDPFLLFDEIGPTDIKPGKQKGFPNHPHRGFETVTYL
                     IEGKFEHKDSQG"
     gene            1585..>2430
                     /locus_tag="VLA74_10265"
     CDS             1585..>2430
                     /locus_tag="VLA74_10265"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSF51131.1"
                     /translation="MNIYPPAEQRFLPFEFYSLMRKNNPVAFDEEKGQWGFYRYSDIE
                     KILRNNINFSSKSGLFQVPEEYQENLNRPNLLNSDPPYHRKLRSIVDTLFVPIEISKL
                     EVRIEKIANDLIDNIIEKDNNSMDLIPDFAYPLPATVIAELLGVPSEDQDTFRKWADT
                     IVNLEVVNDIDSIRKADNTVNEMDIYFSKLVEKKEKRPTNDLISHIIGAKVDGHSLSE
                     IEILNFCGLLLNAGHITTVNLIGNLVFSLLENPQEFKRLQENQNSLIKPAIEETLRYR
                     SPVQFL"
BASE COUNT          887 a          324 c          361 g          858 t
ORIGIN      
        1 accttgtgaa tctttatgtt caaattttcc ttcaattaga taggtaacag tttcaaatcc
       61 tctatgagga tgattaggaa atcctttttg ctttcctggc tttatatctg tgggaccaat
      121 ttcgtcgaat aggagaaagg gatcaaactc tgaaatgaag ttgttcggaa atgatctatt
      181 taacgttaca ccttcgccat cttgagttat ttggctcttt actactctca aaacagaacg
      241 aatagaattt ttattgataa cgttatctga atctgaatct gatggatctt tttttggttg
      301 ttccatattt tttattattt tctgattgtt gattttagac atactataat atacaattca
      361 gaatatttaa gttaagtagt aatttaagac taagtaggta attaatatct tacctgaaat
      421 gagaaagtgt taaacgctaa aataagacaa gctaaaacta tataacatga aaatcgttaa
      481 attgttaaaa taaaatttta tgtttcactt gttatccgaa ttaactcctc attttattgt
      541 aaaagtatta taatagaaaa aatggaggct taaaataagg tcaaatttgt ttcacatccc
      601 actggcccca ttgaaatctc ggttccaatc ctcccttttt atggattcat agagcaataa
      661 ttatatgtcc taggaattaa cctttacttt ttgtaacatt attaaaaaaa cttggataac
      721 aatattcaga agtaattatg atattttaga gttaataatg agaggtacaa aaataaaatc
      781 aaaattaaag gattctgtgg gatttgaacc cttagataaa gtgggaccag ttaaattaat
      841 tcaatgatat tatatcataa gcatgacata gttaaaggat taaagagaat tataggttat
      901 aaaaatatca tcttaaaaaa ccgttgacat ctgtaaaata cttttaatta atataaccta
      961 agtataaatg atctgatact tttttaaaat tattatgtgc gtatataata ttattgtttt
     1021 gtaccgggtt gaagattgtg caaatacttc attttgaaaa atgattaagt tgttgtccat
     1081 gataatacgt acaggaagag acctgtcaaa caaaaactgc ttataagcat tattaagaat
     1141 ttttgatcca ttagataaat aattctataa ataatagcta cataggtttt gttttaacaa
     1201 gtatattctt taaaatagaa ttgaagagtc cgtattaatt cacaaatagg gaaaggatat
     1261 tttgtactgt tgatctaaaa tgtatctttt atgtgtaacc tgatggtcat agctatatct
     1321 gttactgctt aaattaacag aggatagcag tacattaatg aaatcagaaa tttgtcaatt
     1381 actaaatgtt tgtaatgaaa ttttattgca tattatggat attttgtttc cattttatag
     1441 ccttaagctt atttattaaa taaaacatct tttgtagagt aattgattta aagttgcatt
     1501 gaaaagtatc ttcataatta atcaagattt ttctagctgt cgagtaagaa tacatataaa
     1561 tttcttatta tttagctaga agatgtgaat atataccctc cagccgaaca aagattttta
     1621 cctttcgaat tttattcctt aatgagaaaa aataatcctg ttgctttcga tgaagaaaaa
     1681 gggcaatggg gattttaccg ttatagtgat atagaaaaaa ttttaagaaa taatataaat
     1741 ttttcatcta aatctggact atttcaagta cctgaagaat atcaagaaaa ccttaatcgt
     1801 ccaaaccttt taaactcaga tcctccatat catagaaaac tccgcagtat tgttgataca
     1861 ttatttgttc ctatagaaat atccaaatta gaagtacgta ttgaaaaaat tgcaaatgat
     1921 ctgatcgata acataattga aaaagataat aatagtatgg atttaatccc cgattttgct
     1981 tatccattgc ctgcaactgt aattgcagaa ttattgggag taccctccga agatcaagat
     2041 acttttcgta aatgggcaga tactatagtt aatcttgaag ttgttaatga tattgattcc
     2101 atcagaaagg cagacaatac tgtgaatgaa atggacattt actttagtaa attagtagag
     2161 aaaaaagaga aaagaccaac caatgatctt attagtcata tcattggagc taaagtagat
     2221 ggacattctt tatctgaaat agaaatactt aatttttgtg gtcttcttct caatgcagga
     2281 catattacta cagttaacct aataggaaac ttggttttct cattacttga aaatcctcaa
     2341 gaatttaaac gattacaaga aaatcaaaat tctctaatta aacctgctat agaagagact
     2401 ctacggtata gatcaccagt acaattctta
//
LOCUS       DATIAS010000514         3963 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1455287, whole genome shotgun sequence.
ACCESSION   DATIAS010000514 DATIAS010000000
VERSION     DATIAS010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455287"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VLA74_10270"
     CDS             complement(<1..645)
                     /locus_tag="VLA74_10270"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51132.1"
                     /translation="MNFLATISFIVFILFCLNNNSFAIENQTTKNESENKEFNIITTA
                     DIGCSLRAQENIKNIEKLQPELFLAVGDLSYAKTPNCWFDMTKSLDSKTKIAIGNHDD
                     YEEEGSKGESMKQSLLNHYNLDKSYYYFDYQNVHVLVMDTQLELSVDTLESTAMMSET
                     TDTTTTQDTIEDDNKEDKKDKKEESEKKDKKIEPLLERYPLVDLDALLEQNSIDI"
     gene            1224..2324
                     /locus_tag="VLA74_10275"
     CDS             1224..2324
                     /locus_tag="VLA74_10275"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51133.1"
                     /translation="MDDDDSGGDKFFGFFPEDYYDLRNYREGIPLPEQCDQETTTTTI
                     DSDHNNTLLLPTFDKYRKSAETTTKTTNYLSKNYSDDINFIAAGDWSCNKETKKTLKK
                     ITKLEPELVLGLGDYTFQEISPQCWFDISKPIDDIIKITIGNHDLDYQSSYYQILDHY
                     NLPEPYYSFDFYNIHFVTISSEHPFENGSKQYEFIKNDLEESLQDPSILWRIVFLHKP
                     MYTSADFDRKDSENLKNTFHQLFEKYQIDLVLSGHTQYYQRSLPISYNNYNATIPVVM
                     DQNNYEYNNQDGIIFVTAGTAGEKLHKIAYFLPYYTIQKDKFGFLNFDLKNKGHTLIG
                     TFYDTDDLDILDRFVISKDNHSGNKTFSEKEV"
     gene            complement(2746..>3963)
                     /locus_tag="VLA74_10280"
     CDS             complement(2746..>3963)
                     /locus_tag="VLA74_10280"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF51134.1"
                     /translation="GTVKRVTNGKVLDKPLLQVDVSEKDERGLLGIAVSEKKKENSNG
                     TSILNKDMSHNVFLYYVICNEKNEDCKNQIYRYDLDNKNNFLVNPKLLLSIPSFPDPA
                     HIGGIIDIGPDNNLYVTVGNFENTIPDEPYKTKTQNFEDGEPVDGRAGILRITPTGKP
                     VGAEGILGNEYPLNLYYAYGVKNGFGIDFDPITGKLWLTENGPRYGDEINLAEPGFNS
                     GSDKIFGIWKVNAEGKKLKTADGKGGGEEEEKEQKEEEGGGGSVGGGEYVTVVADNPE
                     DLVYFNGKGHYSPPEFTWDKSVAPTALSFLDSDRLGSAYKDDMFVGSVEGGRIFHFDL
                     NENRNQLLLKGSLEDKIATDSTEYGDILFAEGFSIITDLKQGQDGYLYVVSGLKQSKT
                     EEKLGAVYRILPF"
BASE COUNT         1342 a          651 c          479 g         1491 t
ORIGIN      
        1 aatatcaatt gaattttgct caagtagagc atctaaatct actaatggat aacgctcaag
       61 gagtggttct atctttttat ccttcttctc tgattcttct tttttatctt tcttatcttc
      121 tttattatca tcttctattg tgtcttgagt agtagtagta tcagtagttt cactcatcat
      181 tgctgtagat tctaaggtat cgacagaaag ctctaattgt gtatccatta caagcacatg
      241 aacattttga taatcaaaat aataataaga tttatctagg ttatagtgat tcaagagtga
      301 ttgtttcata ctttctcctt ttgatccttc ttcttcataa tcatcatgat tgcctattgc
      361 tatctttgtt tttgagtcca atgatttggt catatcaaac caacaattag gtgtctttgc
      421 ataactaaga tctcctacag caagaaataa ctctggctgt aatttttcta tatttttaat
      481 attctcttga gctctcaaag aacaccctat atctgcagta gttataatgt taaactcttt
      541 attttcactc tcatttttag tagtctgatt ttcaattgca aaagaattat tatttaagca
      601 aaatagaata aaaacaataa aactaatagt agcaagaaaa ttcataaatt gtgacaaggg
      661 ttgttgagaa aacagagtaa tgtatactct ttttatttct tttgtatcta aacaacagag
      721 aattttaatt aaaaaaccga tgagatgaaa atacataatt aaataatgta taagaataaa
      781 attaaggtta ttatagattt aaacagaatt gttgtactaa taacttttag ttatttttat
      841 atttattttt atctgtaatt aattacatat ttatctacta aagaataagt atataaaaaa
      901 tttaataata aagttaaaca tcttaaatag actcaaatta atttttttct gttttagtta
      961 atgataaaga atgagtttct ttcctatttt acggtcatct tatctataaa aattctttaa
     1021 tatattgata ttggtatagg aactatagaa ttcttttcta aaaagattct ccttaattct
     1081 tatataatct ataaacagta attttattga taagataaat aatggtattt actttgaatc
     1141 aatatttttt tttagttaat ttatttttct tgttattttt attttttaca tttagtatat
     1201 tccatattac aactgttgta tcagtggatg atgatgatag tggtggtgat aagttttttg
     1261 gtttttttcc agaggattat tatgatctca gaaattatag agaaggaatt cctcttcctg
     1321 aacaatgtga tcaagaaact actactacta ctatagatag tgatcataat aatacactac
     1381 tactacctac atttgacaaa tatagaaaat cagcagaaac aacaactaaa acaacaaatt
     1441 atttatctaa aaattactct gatgatatca attttattgc tgctggagat tggagttgta
     1501 ataaagaaac taagaagacc ctaaagaaaa ttacaaagtt agaacccgaa ctagtcttag
     1561 gtcttggtga ttataccttt caagagatat ctcctcaatg ctggtttgat atctcaaaac
     1621 ctattgatga tataattaaa atcactatag gaaaccatga tttagattat caaagttctt
     1681 attatcaaat acttgatcat tataatttac ctgaacctta ctattcattt gacttttaca
     1741 atattcattt tgtaactatc tcttctgaac atccatttga aaatggaagc aaacaatatg
     1801 aatttataaa aaatgattta gaagagtcat tacaggatcc ttctatcttg tggagaattg
     1861 tatttcttca caagcctatg tatacttctg cagattttga tagaaaagat tcagaaaatt
     1921 tgaaaaatac atttcatcaa ttatttgaaa aatatcaaat cgatctagtt ttatcgggac
     1981 atactcaata ctatcaaaga tctcttccca tatcatataa caactacaat gctactattc
     2041 ctgttgtaat ggatcagaat aattatgaat ataataacca agatggcatc atctttgtaa
     2101 cagcaggtac agcaggcgaa aaacttcata aaatcgctta tttccttcct tattatacaa
     2161 tacaaaaaga caaatttgga tttttgaact ttgacctcaa aaataaagga catacactaa
     2221 taggtacatt ttatgatact gatgatcttg atattttaga taggtttgtg atttcaaaag
     2281 acaaccacag cggaaataaa actttttctg aaaaagaagt ttaatcagtg taataataat
     2341 tactattaat atatatcatt attttccttc aacaaaagaa aaattatttt gatatctaaa
     2401 ctcataacag taaagaatca ttctactata ctcctccttc tcattcttct cttcctcctt
     2461 ttcctaacga gtaaagatgt atctaatcta attatattct ctctctgttt atcaaaacaa
     2521 atttacgagc attgtaatta atattccatc taatcatcct tgtaaaaata ataataatga
     2581 tcaatttgaa ataaatttta taataacatc tttagataac tatgtaacat tctatatatt
     2641 atattactag aatattttac attataggaa taagttaata attattttat attgtctatt
     2701 gtgatttgta ttattattta ttatctttta ttatgctatt aattatcaaa aaggtaatat
     2761 tctataaacg gcaccaagtt tttcttctgt ttttgactgc tttagtcctg aaacaacata
     2821 gagataaccg tcttgacctt gtttcaagtc tgtaataata ctaaaacctt cggcaaataa
     2881 tatatcacca tattctgtac tatctgtagc tattttgtct tctaaggagc cttttaacag
     2941 tagctgattt cggttctcat ttagatcaaa atggaatatt cttccacctt ctacagatcc
     3001 aacaaacatg tcatctttat aggcagaacc caatctgtct gaatcaagaa atgacaaggc
     3061 agttggagca actgatttat cccatgtaaa ttctggaggg ctataatgtc ctttcccatt
     3121 aaaataaact agatcttctg gattgtctgc tactactgtt acatattcac caccaccaac
     3181 acttcctcct cctccttctt cttctttttg ttctttttct tcttcttctc ctcctccctt
     3241 accatctgct gtctttaact ttttaccttc agcgttgacc ttccaaattc caaatatctt
     3301 gtcagaacca ctgttaaagc caggttctgc caagttaatc tcatcgccat atctaggtcc
     3361 attttctgta agccatagtt ttcctgttat aggatcaaaa tcaataccaa aaccattttt
     3421 tactccataa gcataataca agttaagagg atactcattt ccaagtattc cttcagcacc
     3481 aacaggttta ccagttgggg ttattcttaa aattccagct ctgccatcca ctggttcacc
     3541 atcctcaaaa ttctgagtct tggttttata tggctcgtcg ggaatagtat tttcaaaatt
     3601 ccctacagta acataaagat tgttatctgg accaatatct attattccac caatatgagc
     3661 agggtctgga aatgatggaa tggacaataa tagttttgga tttacaagaa agttattttt
     3721 gttatctaaa tcatatctat aaatttgatt cttacaatcc tcatttttct cattacatat
     3781 aacatagtaa agaaaaacat tgtgagacat gtctttattc aaaatagatg taccgttaga
     3841 attttccttc tttttctcac taacagcaat tcccaacaaa ccacgttcat ctttttcact
     3901 tacatcaacc tgtaaaagtg gtttatctaa aactttaccg ttagtaactc tttttactgt
     3961 acc
//
LOCUS       DATIAS010000515         2568 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1589753, whole genome shotgun sequence.
ACCESSION   DATIAS010000515 DATIAS010000000
VERSION     DATIAS010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589753"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(355..765)
                     /locus_tag="VLA74_10285"
     CDS             complement(355..765)
                     /locus_tag="VLA74_10285"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSF51135.1"
                     /translation="MKFNRIVETCIYSSNLEEMKRFYINYLGLDLVSEEKGRHVFLKA
                     GKSMLLIFNPEKTLNNSNSIFPKHGAITPPSILHFAFEIKKEDYENWKNLLQLKKISI
                     DKELEMRNSKSIYFHDPSGNIVELITDNFWPIEC"
     gene            complement(911..1162)
                     /locus_tag="VLA74_10290"
     CDS             complement(911..1162)
                     /locus_tag="VLA74_10290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51136.1"
                     /translation="MFATCVSQQRKEEKVNEKKLNHLGIDIEKRKCSAALKNDRGKLL
                     DEFFFGNNSDGILDLKRIYDHGTKKFYLLERETKRIILD"
     gene            1256..1384
                     /locus_tag="VLA74_10295"
     CDS             1256..1384
                     /locus_tag="VLA74_10295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51137.1"
                     /translation="MNLGNIHTTINKLEDFHIVRAIISIKNNFFDRYGIGSAPIAT"
     gene            1509..2240
                     /locus_tag="VLA74_10300"
     CDS             1509..2240
                     /locus_tag="VLA74_10300"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HSF51138.1"
                     /translation="MGRKDWDYIGVPKLLVKRLENFLKTPHAKKSGIFNKSELLRNAI
                     IKYLEEQENHFNNIESIDDFIFEMKEGDHILVTYNNNQQLSEIVISSIKRSIDKNQLF
                     VLFISKQEEEIFVHAMEKIGDITTLYNKQDIIIIHTDEHYIEENYSMDSIFAKFNEIK
                     QLAQRNSKSGLNIIATIAGDLFTRQKYNEAISIESKCHKSMNVFDIPITMLCLYKYIP
                     EEFKDISLENHDIVLKHVVTKTGVS"
     gene            2362..>2568
                     /locus_tag="VLA74_10305"
     CDS             2362..>2568
                     /locus_tag="VLA74_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51139.1"
                     /translation="MKSNNKTITFSIAAILVVSLIASTNLGNQISFAQEKIFFTSSAV
                     NSFAQQNEKTQNITETNIPKVLPLV"
BASE COUNT          924 a          388 c          340 g          916 t
ORIGIN      
        1 tggtccagga taccaacttc aaatgtgagg gtatatgtga aggtataagc ctggggcgct
       61 ggcggtcgtg ggttcaaatc ccactggccc cattgaactc tggattccaa ccctatcttt
      121 actagaattc atgaagtaat aatattatga gctagaaatt aatctttact tttttaggat
      181 tatttaggta tcaattaatt atatgaacta agaattttca aatttaataa taatattctc
      241 aatatttgta aaaggtttaa agcattctat gggatttgaa cccttcgggc gggaaattta
      301 tatttgatta ttttttgtct tacaataaga aataaagact tattatttct aatttcagca
      361 ttctattggc caaaaattat ctgtgattaa ttcaactata ttacctgatg gatcatgaaa
      421 atagattgat ttactgtttc tcatttctaa ttctttatcg atactaattt tcttcagttg
      481 taagaggttc ttccaattct cataatcctc ttttttaatt tcaaaagcaa agtgaagaat
      541 agatggtgga gtgattgctc catgtttagg aaatatactg tttgaattgt ttaatgtttt
      601 ttccggatta aaaattaaaa gcatactttt tcctgccttt aaaaacacat gtcttccttt
      661 ttcttccgat accaagtcca aacccaaata attaatgtaa aatcttttca tttcctccag
      721 gttagatgaa tatatacaag tttcaacaat tctgttaaat ttcatttgtt tattctgttt
      781 aattcataag tttatataaa ttattttttt gattgtgttt gtaacataat ttttacaagg
      841 gaatgagaaa gttacttttt gcttaattct ttgtattctc cacattatcg agaattttac
      901 gtttttaact ttaatctaaa atgatccgtt tggtttctcg ttcgagtaaa taaaattttt
      961 ttgttccatg atcgtatatc cttttaagat ctaatattcc atcagaattg ttaccaaaaa
     1021 agaattcatc taatagcttt cctctatcat tttttagtgc tgcactgcat tttctctttt
     1081 caatatctat cccaagatga ttcaattttt tttcattcac cttttcttcc tttctttgtt
     1141 ggctaacaca ggtggcaaac atccatgcat ccccctctcc ataagagtat tatgatagtc
     1201 acttcacaaa atatggttca gtcagagtct cactctcgta cggagtatgt taactttgaa
     1261 tctaggcaac atacatacaa caataaacaa actagaagat tttcatatcg tcagagccat
     1321 tatttctata aaaaataatt tttttgatag atatggtata ggaagtgccc ccattgctac
     1381 ctaaagcaga gtaatcgaga acaagatgtc ccttctattg caatatttag ctaaacgtat
     1441 taggaatgat gagttgcaca acaatccaca tgaatttata atcctttgag ctacaaacat
     1501 catgaaaatt gggtcgtaaa gattgggatt atattggagt tcctaaactc ttagtgaaga
     1561 gattagaaaa ttttctaaaa actccccacg ctaaaaaatc aggaatattt aataaatctg
     1621 aacttttacg taatgcaata atcaaatatc tagaagaaca agaaaaccat tttaacaata
     1681 ttgaatcaat tgatgatttt atttttgaga tgaaagaagg agatcatatt ttagttacat
     1741 ataacaataa ccaacaatta tctgaaatag ttatatcatc tataaaacga agtattgata
     1801 aaaatcaatt atttgtatta ttcatatcga aacaagaaga agaaatattt gtacatgcca
     1861 tggaaaaaat aggtgatatt actactttat ataataaaca agacatcatt ataattcata
     1921 cagatgaaca ttatattgaa gaaaattact ctatggattc catttttgca aaattcaatg
     1981 agattaaaca acttgctcaa agaaattcaa aatctggatt aaatataatt gcaacaatag
     2041 caggagattt gtttaccaga caaaaatata atgaggctat atctatcgaa tcaaaatgtc
     2101 ataaatcgat gaatgtattt gatattccta ttactatgtt atgtctctat aaatacatac
     2161 cagaagaatt taaagatatc agtctagaaa atcatgatat agttcttaaa catgttgtta
     2221 ctaaaacagg tgtaagttag agttaactac ataaaaaaaa ataaaatata aaatataaaa
     2281 taaatctcaa attttaataa tcttacagta accttacagt aagtatcaaa tcttaaatat
     2341 tattaaaaaa tttttatgct tatgaaatca aacaacaaaa caataacatt ttcaatagca
     2401 gcaattcttg ttgtatcact gattgcaagt acaaatctcg gaaatcagat ttcttttgca
     2461 caagaaaaga tattttttac gtcctcagca gtaaattctt ttgcacaaca gaatgaaaaa
     2521 acacaaaata ttacggaaac aaatattcca aaggttcttc ctcttgtt
//
LOCUS       DATIAS010000516         4205 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1589948, whole genome shotgun sequence.
ACCESSION   DATIAS010000516 DATIAS010000000
VERSION     DATIAS010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4205
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589948"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1380..2489)
                     /locus_tag="VLA74_10310"
     CDS             complement(1380..2489)
                     /locus_tag="VLA74_10310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51140.1"
                     /translation="MPHRYSKIKSIDIVTEVDSRSIIKEHSFRLNPISKLFCSSFILI
                     LLIGGTGVLALSSQDVHAQQIQEGEVSVSEDNDANSENSVIDEGGVSIADICGDNIDN
                     DADGQMDDLDLDGCIPAYEETVTEGETTTTATGVEGEVATSEDDATATGVEGEVATPT
                     DSDADPENSVIDEGEGVSIADICGDNIDNDSDGQMDDLDPEGCVLNSKIYDTDELMEL
                     SDKISKKLEDLANTVGAPEPGTTIKETEFHNAIIGFSANLKRQVLDSVSYSEPMPIPL
                     KITLESLRLWIDDPGNQWGEGWWDSNDLDMSAPCYVTVPASQNKCNVYIAEVIFLATG
                     ITFPVIESEEELWKYFPYRAKDWGDTKKTIHILLL"
     gene            3241..3621
                     /locus_tag="VLA74_10315"
     CDS             3241..3621
                     /locus_tag="VLA74_10315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51141.1"
                     /translation="MEEFGKLLLLKESQTVDGKYIIKYRDGFRSHDFKFNKAFYYLQN
                     NGYGKYIILNDDDSAFTPDAFSSRSFTIGFLAQTEARLGIFYVDFTKSENDNYEIMKI
                     PTVDQNKLNEAINKLEEVINTFEL"
     gene            3969..4175
                     /locus_tag="VLA74_10320"
     CDS             3969..4175
                     /locus_tag="VLA74_10320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51142.1"
                     /translation="MKKNQQLAKKISLVVLSIILIGLITLMIFYFLNPQIEYIYQYNK
                     SIRIDNQIFATLSNPTDIAEDSAD"
BASE COUNT         1483 a          658 c          546 g         1518 t
ORIGIN      
        1 gtcctgcatc agagcatgtt ccttttcttt ccgaaacaga aacaaatact ttagtatcac
       61 aaataacata attaattggg aaagctatgt cataccattg aaaaccaaaa tttatttctg
      121 taattactca aaatgtaaat tggcttgcgg ctaaggttgg atgagatgca aattttttta
      181 ttttgttaac atctactttt attcttttgt gggggatttt ttcaatttcc tctttttcca
      241 ttaatattct ataattataa tatttaacgt tattttgtca gttattctac ttactaaact
      301 tgaaataagc cattagaaaa tacctaatta tttttattta tttattataa gtttgcaaaa
      361 ctattcttct gaatgtacaa tcttctatat cacacttaaa tattctttct gtatatataa
      421 taatatgttt tgtaatatat tcagcaaact atttggtaaa aaagaaaaga atgtagagaa
      481 aatagaagat aaaaagctag aagaaaacgc ttaatcattt ttttatttat ttagcgtacg
      541 ggttcttttt taaatatact ttattattat aaactcctgt cgaataaaca agtttatgag
      601 aatgaataag cgatttaaac tatcagctat ttcttgactt aattttttta caacttcact
      661 tttttgactt attatagtta taagttgaat tttttcagaa gctaaactta ttttcaaagt
      721 caataatata atttggttcc tagtgctact cctactatgg agtaagaata ggagtcttga
      781 gtttatattt acgctaataa aattattatc attgtaaaaa aattaattac tcttttactt
      841 gcaatatttc ttctaccaat taaactatta ttgaacactg aaaccgtgtc tattcaactc
      901 tcgactgtct aattcatata cagatgaacc cgattgttag aaaatgaatt cgattaattc
      961 atttcgtaat ctatgtatcc tctaaaatga tttccagaaa tagcattatt aaatttattg
     1021 taaaattttt tagtgccgaa aaattaatag atattaaatg caattttagg aataaaaata
     1081 taatgttttg taatattata cataaagagg ttcaaaaatg gaaaaagatt actatgtatt
     1141 agatacaaaa agaatttgca ttaaaaagaa ttatacaagt tatggtgtga atgttctata
     1201 gacaccccca tcttccagtt gtttaatttg tataccatgt tcgtgttgca ccgaatttag
     1261 tccataaact ccgtctccgt tatcacgtgc gctaatatat aatttaactc cattatattc
     1321 tcctagataa attccagtat gacctccatt ggatcataca tcacccattt gaggattatt
     1381 tacaataaca aaatgtggat ggttttcttt gtatcgcccc aatcttttgc tcgatatgga
     1441 aaatatttcc atagttcttc ctctgattca ataaccggaa aagtaattcc agtagcaaga
     1501 aatattactt ctgcaatata gacattacat ttattctgac tagcaggaac agtcacataa
     1561 catggtgcag acatatctag atcgttacta tcccaccatc cttcacccca ttgattacct
     1621 ggatcatcta tccataacct taatgattct aaggttattt ttaatggtat gggcataggc
     1681 tcactgtaac tcactgaatc caatacttga cgcttaagat tggctgaaaa tccaattatt
     1741 gcattgtgaa actcagtctc tttaattgtc gttcctggtt ctggagcccc tactgtatta
     1801 gccaaatctt ctaacttttt ggaaatctta tcgcttaatt ccattagttc atcagtatcg
     1861 tatatcttgc tatttagaac acagccttct ggatcaagat catccatctg accatcagaa
     1921 tcattatcaa tattatcacc acagatatct gctatagata ctccttctcc ttcatcaatt
     1981 actgaatttt ctggatctgc atcactatct gtaggtgtag caacctctcc ttctactcct
     2041 gttgctgttg catcatcttc agatgtagca acctctcctt ctactcctgt tgctgttgtt
     2101 gttgtctccc cttcagttac tgtttcttca tatgctggaa tacatccgtc tagatcaaga
     2161 tcatccatct gaccatcagc atcattatca atattatcgc cacagatatc tgctatagat
     2221 actcctcctt catcaattac tgaattttct gaatttgcat cattatcttc agatacagac
     2281 acctctcctt cctggatttg ctgagcatgc acatcttgac tagacaaagc caggactcct
     2341 gttccgccta tcagtaatat gagtataaag ctactacaaa ataatttaga aatcggattt
     2401 aatctaaaag aatgctcttt aattatgctc ctactatcca cttctgttac aatatcaata
     2461 gattttattt tactatatct atgaggcaaa atgtttgcta attaaaatga agtttcctca
     2521 tttatttaag aatataataa gaacttaaat aactttaaca aattatgata attcaacaac
     2581 aattgcttta taattaagtc tagatttttt ctaaaaaatt ttctttattt actaaaaatt
     2641 ttataaacca atcaattatt ctttagttcg aatatgatag aatgatttaa atcatttcaa
     2701 attacaagag cagatttcct catttttaat atttaaacta gtcttcattt ggataaaaat
     2761 ttggattaga gatgcatgta gaggactaaa taactaacaa cactttacaa atgaagaatt
     2821 catttaaaat gaaagtaaac aaaataaaaa attatctaaa gaatattatt aaataaaaag
     2881 attatcattg gttgaacact gaaaccatga ctattcaact cccgacgggc ccgtagtttt
     2941 ctcgggttca ctatatttca gaataaaaaa gaagaaaagc aatataccct ctaatgtatg
     3001 aagtttagac gtgcataaat aaggagttat tttacgtata ggtaaaccaa tgaaaagatt
     3061 aaagttgtat ttttctatgt aacaatacat tgccacacat accacaagga atccacatca
     3121 aaagaaacat ggaatgaagc taagcagata ataaaaaatg gtataatcaa gaaactttct
     3181 gctgcaaaac agaatataga tattgataca gagattgctg ctggaattta catttatgct
     3241 ttggaagaat ttggaaaact gttgttatta aaagaatccc aaactgttga tgggaaatac
     3301 ataataaaat atagagatgg atttcgctct catgacttta aattcaataa agcattttat
     3361 tatttacaga ataatggtta tggtaaatat attatattga atgatgatga tagtgctttc
     3421 actccagatg ctttttcatc gagaagtttt accataggat ttcttgcaca aactgaagca
     3481 aggttaggaa tattttatgt tgattttaca aagtcagaaa atgataacta tgagataatg
     3541 aaaattccaa ctgtagatca gaataagctg aatgaggcta ttaacaaatt agaagaggtt
     3601 attaatacct ttgaattgta atcatttata gaatattctt taacttatat ttttaatcta
     3661 caaccttttg tcatacttta ccatataata tatattggat ctaaaagatt tatagcaaag
     3721 attcagaaag aaaatatcaa tgtaaataaa tgagctcact tataaaatgg aatcagtggg
     3781 atttgaaccc ttctataaag tgggaccagt taatattttt ttattgctaa tttaatatat
     3841 tagcaattat aaatcattta tatcaaatag agaaaagtaa aatgaaatat ctgaatctct
     3901 tatccaaagt attctgaatc aatgtttata taaattttct tgtaactaat tcaatagatg
     3961 ttatttaatt gaaaaaaaat caacaactag caaaaaaaat atctttagtt gttttatcaa
     4021 taatattaat aggattgatt actttaatga ttttttattt tttaaatcca caaatagaat
     4081 atatttatca atataataaa tcaattagaa tagataatca aatctttgca accctttcaa
     4141 atcctacaga tatagcggag gatagtgcag attgatattt tcttattctg ctgctttgat
     4201 agata
//
LOCUS       DATIAS010000517         7485 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1590144, whole genome shotgun sequence.
ACCESSION   DATIAS010000517 DATIAS010000000
VERSION     DATIAS010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7485
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590144"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..843)
                     /locus_tag="VLA74_10325"
     CDS             complement(226..843)
                     /locus_tag="VLA74_10325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51143.1"
                     /translation="MSSKNNKNRKNSKENTEKKKSYFDINRKKRTKNLKTFVLPILGG
                     IGILLVVSMFLFSPNTSKSGFGALGSAHEHAAFLVKINGKNIDFSLPKYQVQSDYIHV
                     ENGDGTTLHRHATNVTFADFLDSVKMSIDRENNNNCLLFDNGTQYCNDSRHKLNAFIN
                     GNQTTAISNYVINNNDRLLLVYGNETDDQINKAVKEVNDLEIQFT"
     gene            976..2004
                     /locus_tag="VLA74_10330"
     CDS             976..2004
                     /locus_tag="VLA74_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF51144.1"
                     /translation="MLFFTSPIGLGHATRDIAIAQNLDIKDMSLKFVTGSKAYTFIAN
                     CGYEVFNLYNPPEFNIENGVLNNSFNWLIKYFLYYKKCKIAARTVINSKDNDKILISD
                     EDFASIAVAEERKRKKILITDIINTTFTSGFLSLLEKQMNKKLCRMIRRCDCVIIPDF
                     GEDSENLRYVGPIVRNIYDSKENLRQKFNFNKKTILVCVGGTNHGKFLIEKTKESFEK
                     IKKRLDVDLVIVAGPSLTIKPSDDCRLLGFVPNLNEYIYACDLVISLAGRSTMDESIV
                     YNTPGIFIPLKNHFEQEEGARRLGFEFNDIFRLNELIEERLGFSKDNRKIVNNGAQKA
                     AEIILEFL"
     gene            2063..3535
                     /locus_tag="VLA74_10335"
     CDS             2063..3535
                     /locus_tag="VLA74_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HSF51145.1"
                     /translation="MTEVVIAKFGGSTIGQNGEQIPKVIERIKLMKNEGNKIVVVFSA
                     PLMEYEGKIRSMTDIAINIGRKYASGQKVDTKIFYDTYLNIAMNYVSEKYLKEFEYHL
                     EEFYHYVTISLNNSIENKRFIDVNRARTLAYGGEITMSYLMDYIMRSNGLKSNHVDIE
                     KWPIITDDNFEAANFMIEESKERKKHLIQLIEENEVISIGGFIGKTTDGLETTYERGG
                     SDRTAADIAIILHDDYKTQIDFEKDNIVLSADPKIVKDNLESIKYLSYNEAKLAGMFG
                     MKILDPIAIKEIDDNKLDIPIVITSIINPLNVTIIQKSLDNDKKGFEHKDNKKDRNIS
                     NSLIKIVTGKRNCAIVRMESINASYLIASLEKDKQYYNFLKLSPYKIDDMEITRLLFL
                     DADYVKRHERHFKAFYPKTEFSYGRGVVTLIGDSMWKMPKIVSTASRTLGDNDINILN
                     LDAQEETSRILIIVEDIDNNVANAIKAVHLQRISNDRKST"
     gene            3571..4491
                     /locus_tag="VLA74_10340"
     CDS             3571..4491
                     /locus_tag="VLA74_10340"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HSF51146.1"
                     /translation="MNNGHIWIDGSFYKWDEAKIHVLTHSLHYGTAVFEGIRCYNTVK
                     GPAIFRLEDHVNRLFNSAKIYFMNIEFSKEQIEDAIIDTTKKNRIDECYIRPLAYFGY
                     GKMGINPLSNKVSVAIALWKWDEYLKKEDVNHGVRVMVSGWMRIDARTMPTHAKATAN
                     YANSALARIEAIKAGFDEALMLNTDGMVVEASGENIFIVKNNVLITPPTASGALEGIT
                     RDTVLRLAKDDNIVTEIRDISKDELYLADEVFLTGTAAEIKAVGEIDNRRIGNGGIEK
                     ITLQLKSLFDDLTRGNHKYSTEWLSYINID"
     gene            4586..5047
                     /locus_tag="VLA74_10345"
     CDS             4586..5047
                     /locus_tag="VLA74_10345"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HSF51147.1"
                     /translation="MKKKNNNKFETDLFRVYLSWIDIENLIDIISNKIRKGNKKYDTV
                     IGIKNGGIVPARLISRELEIKEIEFISTKSVQTDEFYDRIKNNKKYLLVDEIYDTGKT
                     FLAIKEHLKNIEYDFSCLISRYNLQDDGIIIGRVLNNTNWIVFPWENRNIK"
     gene            complement(5416..6498)
                     /locus_tag="VLA74_10350"
     CDS             complement(5416..6498)
                     /locus_tag="VLA74_10350"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate uptake regulator PhoU"
                     /protein_id="HSF51148.1"
                     /translation="MPIYSDSGEVRKIQFTGKSTYVLSLPKKWVTELHLKPGDPVTII
                     REPDNTLSIVSDIARLSKESVDEATVQVLKDDSSNSIKRKLVSMYLAGFNIINLKSKL
                     GRINPLQREAAREVVRRNLVGTEIIADSSDLITIQVLITLPELSVNTAVRRMFLLATS
                     MHKDAIIALTELNYDLANAVIRSDDEVDRFSLYILRNLVIATKNDRMLSEIGLKNTSD
                     CLSYRSAVKSIERIADHASKITEQCLFIKDKIPNEILENVKKMSDLSLQDLNDSVEAF
                     LRRDYLIADKIVDRVENVRLLENEIVLILDKFGDSFNQNKIYVKLILEHLRRTAEHAS
                     DIAEEALNQTIGEVITIEKRPSSYKI"
     gene            7195..>7485
                     /locus_tag="VLA74_10355"
     CDS             7195..>7485
                     /locus_tag="VLA74_10355"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HSF51149.1"
                     /translation="MKIRIDQQSPLNIIDEKIDGFKILGVGASLRKNSTSTKILQMTL
                     EECQKYGAIISVLDLREIELPIFSPNKPKEITENVRKINDEVIESDAFILATP"
BASE COUNT         2837 a          937 c         1206 g         2505 t
ORIGIN      
        1 tcttttcttc atatcaatag agtaaatata tgtcttcttg aatttgaatt cttgtgaaat
       61 atttttattt taaatacaga tcataattat gatttaattg taaaaatttt caaatataat
      121 cgatcagttt ttggaattaa aatatgtgat gtaagaagat agaaatattc gtattaaaat
      181 atttgtatct gaatatatgt tcagtagtaa aaaattgaaa aattatcaag taaattgaat
      241 ttctaaatca tttacttctt taacagcttt gttgatttga tcatcagttt catttccata
      301 tactaataat aaacgatcgt tattattgat tacataatta gagatagccg tagtttgatt
      361 tccatttatg aatgcattta atttatgtcg actatcgttg caatattgtg ttccattatc
      421 aaacagtaaa caattattat tattttctcg atcgatactc attttaacac tgtcaagaaa
      481 atctgcaaaa gtaacatttg tggcatgtct atgtaatgtg gtaccatctc cattttctac
      541 atgaatataa tctgactgta cttgatattt cggtagacta aaatctatat tttttccatt
      601 tatttttact aaaaatgcgg cgtgctcatg tgcagaaccc aaagctccaa agcctgattt
      661 agatgtattg ggagaaaata aaaacataga aactactaaa agtatgccta ttcctcctaa
      721 tattggaagc acaaaggttt ttagattttt agtgcgtttt tttctattta tgtcaaaata
      781 gctctttttc ttttcagtat tttctttgga atttttccta tttttattat ttttactaga
      841 catactaatc tgattaattt gagttaatat gcattatata taatatatta gctttaaagt
      901 attttatttt aacatgaaaa aatttaaaaa agcaagataa aaataaaaag aatcaaatta
      961 aataaataca gatatatgct tttctttact agcccgatag gtctaggtca tgccacacgt
     1021 gatatagcaa tagctcagaa tttagatatt aaagatatgt cattaaaatt tgttactgga
     1081 tcaaaggcat atacttttat agcaaattgt ggatatgagg tttttaatct atataatcca
     1141 cctgaattta acattgaaaa tggggtacta aataattctt tcaattggct aataaagtat
     1201 tttttatatt acaagaaatg taaaattgct gctagaaccg taattaattc gaaagacaat
     1261 gacaaaattt taattagcga tgaggatttt gcatctattg cagtagcaga agaaagaaaa
     1321 cgcaaaaaaa ttttaatcac ggatatcatt aatactactt ttacaagtgg ttttttatct
     1381 ttattagaaa aacaaatgaa caaaaaattg tgccgaatga ttagaagatg tgattgtgta
     1441 attattccag attttggaga agatagtgaa aatttaagat atgttggacc aattgttaga
     1501 aatatttatg atagtaaaga aaatttaagg caaaaattta attttaataa aaaaacaatc
     1561 cttgtttgcg taggtggtac taatcatggt aaatttttaa tagagaaaac aaaagaatct
     1621 ttcgaaaaga taaagaagag gttggacgtc gatcttgtaa tagttgctgg tccatcatta
     1681 acaataaaac catcagatga ttgcaggttg ttaggatttg taccaaattt aaatgagtat
     1741 atctatgctt gtgatcttgt tatttctctt gcagggagat ctaccatgga tgaatccata
     1801 gtatacaata ctcctggaat atttattcct ttaaagaatc attttgaaca agaagaaggt
     1861 gcaagaagat tgggatttga attcaatgat atttttagac tcaacgaatt aattgaagaa
     1921 agacttggtt tcagtaagga taacagaaaa attgtgaata atggagctca aaaagcagca
     1981 gaaatcatcc tagagtttct ctaaatattt attacattaa tactatatca attcaagtaa
     2041 ataataccta ggaacaagag atatgactga agtagtaatt gcaaagtttg gaggaagtac
     2101 tattggacaa aatggtgaac agataccaaa ggtaatagaa agaataaaac taatgaaaaa
     2161 tgaaggaaac aaaattgtag tagttttttc tgctccttta atggaatacg aaggaaaaat
     2221 aagatccatg acagatattg ctataaatat tggtagaaag tatgcatcag gacaaaaagt
     2281 agatacaaaa attttttatg atacatactt aaacattgca atgaattatg tgtctgagaa
     2341 atatttgaag gaatttgaat atcacctcga agaattttat cattatgtta ctatatcttt
     2401 aaataattca attgaaaata aaagattcat agatgttaat agagcaagaa ctcttgcata
     2461 tggaggagaa attactatgt catatctaat ggactatatt atgaggagta atggattaaa
     2521 atcgaatcat gtagatattg aaaaatggcc tataattact gatgataatt ttgaagctgc
     2581 aaattttatg attgaggaat ccaaggaacg caaaaaacat cttattcaat taatagaaga
     2641 aaatgaagta atatctattg gtggttttat tggcaaaact acagatggtt tagaaactac
     2701 atatgaaagg ggaggttcag atagaactgc tgcagatatt gctattattc ttcatgatga
     2761 ttataagaca caaatagatt ttgaaaaaga taatattgtt cttagtgcag atccaaaaat
     2821 tgtaaaagac aatctagaat caataaaata tttatcgtat aatgaagcta aattagctgg
     2881 gatgtttgga atgaaaattc tagatcccat agcaataaaa gaaatagatg ataataaatt
     2941 ggatatccca atagttataa cctcgatcat taatccttta aacgttacaa taattcaaaa
     3001 atctttagat aacgataaga aaggttttga acataaggat aataagaagg ataggaatat
     3061 ttcaaattct ttaatcaaaa tagtaacagg aaaaagaaat tgtgctatag ttagaatgga
     3121 gagcataaac gcatcttatt taatagcatc gctggagaaa gataaacaat attacaattt
     3181 cttaaaatta tcaccgtata aaattgatga catggagatt actagactac tatttttgga
     3241 tgcagattat gttaagcgtc atgagcgaca tttcaaagca ttctatccga aaacagaatt
     3301 ttcatatgga agaggcgtag ttacattaat aggagattct atgtggaaaa tgccaaaaat
     3361 tgtgtccact gcaagtagaa ctttaggaga taatgatata aatatattga atttagatgc
     3421 tcaagaagaa acatcaagga ttttaataat agttgaagat atagacaata atgttgccaa
     3481 tgcaataaag gcagttcatt tacaaagaat tagtaatgat aggaagagca cctagtcttg
     3541 aattatttga tatgaaaaga atgaaatgtt atgaataatg gtcatatttg gatagatgga
     3601 tctttctata aatgggatga agcaaaaata catgttttaa cccattctct acattatgga
     3661 acggcagtat ttgagggaat ccgttgttat aatactgtta aaggtcctgc aatattcaga
     3721 ttagaagatc atgtaaatag gctatttaat agtgccaaaa tatatttcat gaatattgaa
     3781 ttttccaaag aacaaataga agatgcgata attgatacta ccaaaaaaaa cagaatagat
     3841 gaatgctata ttcgaccgtt agcttatttt ggttatggaa aaatgggaat taatccatta
     3901 agcaataagg tatctgtagc tatagcgtta tggaagtggg atgaatatct aaagaaagaa
     3961 gatgtcaatc atggagtcag agtaatggta tcaggatgga tgagaataga tgcaagaaca
     4021 atgcctactc atgcaaaagc aactgccaat tatgcgaatt cagctttagc aagaattgaa
     4081 gctataaaag ccggatttga tgaagctctc atgcttaata ctgatggaat ggtagttgaa
     4141 gctagcgggg aaaatatttt tattgttaaa aataatgttt taattactcc tccgacggct
     4201 tccggtgcat tagagggaat aacacgtgat acagtattaa gattagctaa agatgataat
     4261 atcgttactg aaattcgtga tatatcaaaa gatgaattgt atttagcaga tgaagtattt
     4321 ttgacaggta ctgctgctga gataaaggca gtaggagaaa tagataacag acgtatagga
     4381 aatggtggta tagaaaaaat aactctacag ttaaaaagtt tatttgacga tctaacaaga
     4441 ggcaaccaca aatacagtac cgagtggctt agctacataa acatagactg attaaactac
     4501 agatgtttgt ttcaatatca aaaataagcc aattttcctt taaaatatat atgaataagc
     4561 ataaatcttt caaaatttga tccaaatgaa gaaaaagaat aacaacaaat ttgaaactga
     4621 tttatttagg gtatatctga gctggatcga tattgagaat cttattgaca taattagtaa
     4681 caaaattaga aaaggcaata aaaaatatga tacagtgatt ggaataaaaa atggaggaat
     4741 cgttcctgca agattaattt caagggaact agaaattaag gagattgaat ttatttcaac
     4801 taaatctgtt caaacagatg aattttatga tagaataaaa aacaataaaa aatatctttt
     4861 agttgacgaa atatatgata ccggtaaaac ttttcttgca attaaggaac atttgaaaaa
     4921 tattgaatat gatttttcat gtttgataag tagatataat ttacaggatg atggtataat
     4981 cataggaaga gttttgaata atacaaattg gattgttttt ccttgggaaa atagaaatat
     5041 aaagtagaaa aaaatatttc gtttaggttc atatagaact aatgatatta taatgtcaaa
     5101 gggttaatca catcatcatg tacattgtat atgcaaaata actatagacc aatgatttgg
     5161 ttcatagctg gtatatactt aatggcaaat ttgccaacaa tattagaaca aacttacgca
     5221 cagattacta taaatggagc aggtacatag ttcccatttc cattaataga cacgtggaga
     5281 gttgaatatt aaaatgttaa acctgatgta aatatcaatt atcaatctat tggaagtgga
     5341 ggaggagtaa aacagtttat agaaaaaacg gtggatttcg gagcgactga tgctccgtta
     5401 aatgaggaag aaaatctaaa tcttgtaact tgatggtctt ttttctatag ttattacttc
     5461 tccgatagtt tgatttaatg cttcttctgc tatgtcacta gcatgttctg cagtacgtct
     5521 tagatgctcg agtataagtt tgacgtaaat cttattttga ttaaaggaat caccaaattt
     5581 atccagaatt aatacgattt cattttcaag aagtctcaca ttttcaactc gatccactat
     5641 tttatctgct atcaaataat ctcttcttaa aaatgcttca actgaatcat taagatcttg
     5701 taatgataga tcgctcattt ttttcacgtt ttcaagaatt tcattaggaa tcttatcttt
     5761 tataaacaaa cattgttcag ttattttaga agcatgatct gcaattctct caatactttt
     5821 tacagctgat ctataactta aacaatctga agtatttttt aagcctattt cacttaacat
     5881 tctatcgttt tttgtagcaa taactagatt tctcaatatg taaagactaa acctgtcgac
     5941 ttcatcatca gatctaataa cagcattagc cagatcatag ttcaactctg ttaaagcaat
     6001 aatcgcatct ttatgcattg aagtagcaag tagaaacatt cgtctcactg cagtatttac
     6061 agaaagctct ggaagagtaa ttaaaacttg tatcgttatt aaatctgaag aatcagcaat
     6121 aatctctgta cctaccagat ttctacgtac aacttctcta gctgcttcac gttgtaatgg
     6181 attaattctt cccagtttcg attttaaatt tattatatta aatcctgcta aatacatgga
     6241 taccaattta cgttttatgg aattggaact gtcatctttt agtacttgaa cagtagcttc
     6301 atcgactgat tcttttgata atctagcaat atcagatact attgataatg tgttatctgg
     6361 ttctctaatg attgtaacag ggtctcctgg tttcaaatgt agttctgtta cccatttttt
     6421 aggtaatgat aagacgtatg tggatttccc agtaaattgt atttttctta cttcaccact
     6481 gtctgaatat attggcaata gttagagatg gagaaacatt attagtatag tttatgttag
     6541 ttgacaatat agatctatca aatctatatt tactatataa tatatcgtta tttactatat
     6601 aatatatcgt taggtcagga actattcata taatactata tagacataaa ctaagtctag
     6661 taatttttaa ttgaaatatt tttccttgag acaataatcg aagactgacc tatgatataa
     6721 gataacgctc caaatgattc tcttccgact actgcattcc aatctgtacc agtgaagaaa
     6781 ctaatccttc ctttgaaaaa attttagaac catcaccaac tgaaaaaact attaatgata
     6841 aataactagt gtatagatag aagctccaat tataatcctt tgaaaatttt gtcaaatttt
     6901 gatgtattct ttaatcgagt tagagaattg tgaatactaa tattgtcatt gaatatggaa
     6961 ctcgtgactg gtactaccct ctaatattaa gaagattgat attttttagt tatcacatag
     7021 ttttaacgta gaataacaaa gtctatgata cagatattat ataaagattt ttataaaata
     7081 ataagaaaat atacaataaa aattaagatg cgaaattaaa gttgtattta tctttataca
     7141 gtcaattatt tgtatcacga ataattaaaa taagaaaata aacaaattgt ataaatgaaa
     7201 ataaggatag accagcaatc cccactaaat ataattgatg aaaaaataga tggatttaaa
     7261 attttagggg ttggtgctag tttacgtaaa aattctacaa gtaccaaaat actacaaatg
     7321 actcttgaag agtgtcagaa atacggtgca attattagtg tacttgattt aagagaaata
     7381 gagttaccca ttttcagtcc aaataaacct aaagaaatta cagaaaatgt tagaaagata
     7441 aatgatgagg taattgaatc tgatgcattt attttggcca cacct
//
LOCUS       DATIAS010000518         3700 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_639106, whole genome shotgun sequence.
ACCESSION   DATIAS010000518 DATIAS010000000
VERSION     DATIAS010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3700
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639106"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..531
                     /locus_tag="VLA74_10360"
     CDS             <1..531
                     /locus_tag="VLA74_10360"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51150.1"
                     /translation="ASITDPKKKRVDAIIREISNWPESYTNVSRYNNEPSEDIFNPLN
                     DNRVVGRGGRFKIQIIIVDDDQGTTLPFKLGLESQGFAVDTFNDPKLALSHFHSGSYD
                     LALIDVRMEGMNGFELVQEMKQIDKKLKVCFITSFTAYYDSLIQEYPNMEHKCFIQKP
                     ISIDDLIKHMERVLHY"
     gene            1092..2501
                     /locus_tag="VLA74_10365"
     CDS             1092..2501
                     /locus_tag="VLA74_10365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51151.1"
                     /translation="MIYKYIAFLAFFTTVFLLNNHDDNTVEAKLIVDSTLNPDKSSTG
                     NVSVLTTMKNEGNITTAIRVLEIILPWDRIIEELNPPVLLNSNRIYTTSMNITVPDQT
                     KPGNYALTVLVKTNDSDYLTHSKLAISTLEGISLSGEIPFSIIAIIAPGIMTYFIIIY
                     FLTRTFDRSYIEVGLVSVGFGFLDWGILKLLTHSSFYSILILSNHRIEDYIYVFIIAI
                     ALGLVVVYTIRFARRIYQLIMKVKIIRDFNQELLIKGYAKSSEPTWISFINQQNDNSK
                     EHGLRYTVGLRIYAKTATSFFTVYSLNGLLRQVDEDPPYHISLRPKYRAACTMTDLIE
                     ILKGGSSPLLKNLKENKKFRTKVGKTVGASWCSKPEDIFNKAKEKIDKAKDIEALSKE
                     LEKIDFSVFVGGVIKSLEEYKNVEVTKLYDNFSFIVYDQISKVEVITYETPYSLMVKD
                     NNNQTKEIPATYELSKLAR"
     gene            complement(2607..3125)
                     /locus_tag="VLA74_10370"
     CDS             complement(2607..3125)
                     /locus_tag="VLA74_10370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51152.1"
                     /translation="MNAAASQPQPSQPQPSKPQPSAYTQPYTYEGDDYEQESQSLNES
                     AEAPEGDPSGDPKDHSTSGSPDDSKDPAKRAAEKFPETWAEDEPHLHIYFIASVDDAT
                     WITQEIYKEIDKGTIAASLYIEKSENSIIVDGSIIYDGPMISRSKDENAYQARANLIK
                     RIKEKLKSIFGL"
BASE COUNT         1280 a          562 c          599 g         1259 t
ORIGIN      
        1 gcttcaataa cagatccaaa gaaaaaaaga gtggatgcaa taataagaga aatctccaat
       61 tggccagaga gttatactaa tgtttctaga tataataatg aaccctcaga agatatcttc
      121 aatccattaa atgataatag agtagtagga agaggaggaa ggtttaaaat acaaataatt
      181 atagtggacg atgaccaggg aacaacactt cctttcaaac ttgggttaga aagtcaagga
      241 tttgctgttg acactttcaa tgaccctaaa ttggcattat ctcactttca tagtggatct
      301 tatgatttag ctctaattga tgttagaatg gaagggatga atggttttga attagttcag
      361 gaaatgaaac aaattgataa aaaacttaaa gtttgtttta taacctcttt tacagcctat
      421 tatgattctt taattcaaga ataccctaac atggaacaca aatgcttcat ccaaaaacca
      481 atatcaattg acgatttaat aaaacatatg gagagagttt tacactatta aaaaattaaa
      541 caatataaaa actataaagc attttcaagc aacattataa attgcataaa taatttgatt
      601 caatactcag tataaaaaag aagtaatttt atctattata ctatcaacga tataccaatc
      661 atttggaaac aaaaaactcg atacctgttg tttcattttt atattttttt actgcataac
      721 ttgtattttt gagagatgaa cgcatccatc aatggaagca ataactagaa caagaactaa
      781 cacaaaaact atagttttta ttaatacttt tcattagtta aaatgtaaca gcaagttagt
      841 tatcaacagc tgaatgatat gctctactat tcagttgata atccgatttg attttctacg
      901 ttattattag agtagcaaga gatcggatca gacttttaaa tcgtgagata gtagagtatc
      961 atgaacagaa acaaaagtat tttgttataa tatctttctg aatatagatt atctgtaagg
     1021 tttcaaactt tagtattttg gtcatatggt gttctaaaaa gtaaaataat aagcctgtta
     1081 cagtagatac attgatatat aaatacatcg cttttctagc ttttttcact actgtatttc
     1141 tactgaataa tcatgatgat aatactgtag aagccaaact aatagtagat tcgactctca
     1201 atcctgataa atctagtacc ggtaatgtat cagttcttac tactatgaag aatgaaggaa
     1261 atattacaac agctataagg gttttagaaa taattttgcc ttgggatagg ataatagaag
     1321 aactaaaccc gccagtttta ctgaactcaa atagaattta tactacttcg atgaatataa
     1381 ccgttccaga tcaaactaag ccaggcaatt atgccttaac agttcttgtt aagactaacg
     1441 attccgatta tcttactcat tccaaactcg caatcagtac attagaaggg atatctttat
     1501 caggtgaaat cccattttcg attatagcaa taattgcacc aggaattatg acatatttta
     1561 ttatcatata ttttcttact cgtacattcg atcgaagcta tattgaagtg ggattagtga
     1621 gtgtgggttt tggtttcctt gactggggca ttcttaaatt attgactcat agtagctttt
     1681 attctattct gatactctcc aatcacagaa ttgaagatta catatatgtt tttataattg
     1741 ctattgcgtt aggtttagta gtagtatata caataaggtt tgcacgacgc atataccaat
     1801 taataatgaa agtaaagata atcagggact ttaatcaaga gctacttatt aaaggatatg
     1861 caaaaagtag tgaacctaca tggatttctt ttattaatca acaaaatgat aattctaaag
     1921 aacatggtct tagatatact gtagggttac gaatatacgc gaaaactgct acctcttttt
     1981 ttactgtgta ttcactaaat ggactattaa gacaagtcga cgaggatcca ccttaccata
     2041 tatccttacg tccaaagtat agggctgctt gtacaatgac cgatttgata gaaattctga
     2101 aagggggatc atctccactc ctgaaaaatt tgaaggaaaa taagaagttt cgtacaaaag
     2161 taggcaaaac agttggagca agctggtgtt ctaagcctga ggatatcttt aataaagcaa
     2221 aagaaaaaat agataaagca aaagatattg aagccctttc aaaggaatta gaaaaaattg
     2281 attttagtgt ctttgttggt ggtgtaataa aaagtttaga agaatataaa aatgtagaag
     2341 ttacaaaact atatgataat ttttcattta ttgtgtatga tcagatcagt aaagttgaag
     2401 tcataactta tgaaacacct tactcgttga tggtaaagga taataataat caaactaagg
     2461 agattcccgc cacttatgaa ttgtccaaac tcgctagata aatattaaac atcatctaaa
     2521 cctttaactc ctattaggca aaaattatat tattctttca ttgtaaccaa ggtaatctta
     2581 tagtctcatt caatacttgt actgtcttat aatccgaaaa tactcttcaa cttttcctta
     2641 attcttttta taagattagc tcttgcttga tatgcgtttt cgtctttaga tcttgaaatc
     2701 attggtccat catatataat acttccatct actataatac tattctcaga tttttctata
     2761 tacagacttg cagcaattgt gcctttatct atttccttgt atatttcttg agttatccat
     2821 gttgcgtcat caacgcttgc aataaaatat atatgcaaat ggggttcatc ttcggcccat
     2881 gtctcaggaa atttctcagc tgctctcttt gctggatctt tagaatcatc tggacttcca
     2941 gaggttgaat gatcctttgg atcaccagat ggatcgcctt caggtgcctc agcagattcg
     3001 ttgagggatt gtgattcctg ttcataatca tcaccttcat atgtatatgg ttgagtatat
     3061 gctgatggtt gaggtttaga tggttgaggt tgagatggtt gaggttgaga tgctgctgca
     3121 ttcatatatt gatctaatat ttttagacct aaaaaatctt tttataattc aacctttttc
     3181 tataatttca taacagagct catggatgca actcctattg cttacttttg ttaccataat
     3241 tctgggcgaa agattttgtg taaaaaacaa tttacaaacc tcagctataa caacagaaat
     3301 gctaataacc taccaagatt tgtattttac tgctctgtag catgattcat taatttattg
     3361 ataatgtttc atggttgtag cctatcatgt tatgaatata aacaaattat ataatgatgc
     3421 tttcaacatt atctctttta tcatgtttgg atatttagag cctaactata tgtgaattaa
     3481 caattggatc taacatttag acggtaaagt atgaattttc aattatgatg cataaagaat
     3541 atttgtaact gatgctaata taataatagt taagatgtta accacgtttt tgggattgag
     3601 gataatagcc tcgtgagcct aactgtggca ccttcttaac taatggataa agacggtaat
     3661 gagggaaagc ctcgaatggg tatatatctg tctgtccaat
//
LOCUS       DATIAS010000519         3029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2002337, whole genome shotgun sequence.
ACCESSION   DATIAS010000519 DATIAS010000000
VERSION     DATIAS010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2002337"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..236
                     /locus_tag="VLA74_10375"
     CDS             87..236
                     /locus_tag="VLA74_10375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51153.1"
                     /translation="MEPKKVVFRLDHDILKDIKRIAVEKEVTQNDLFVEGMKFIREKY
                     KNLLK"
     gene            580..1026
                     /locus_tag="VLA74_10380"
     CDS             580..1026
                     /locus_tag="VLA74_10380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51154.1"
                     /translation="MPNLDPWINQYENDQQIITITTIAEKATNSKFENHLLSVKTECQ
                     KIINSHQHPTFLERYQKIIEMIDWTLERYRTVIQRNEIQQQQNEPDLVIINRIREELD
                     EKRKIAIYKNKQSELRDEVACIDLKKLLLIMYYLKYVNLFILSKLG"
     gene            1116..1391
                     /locus_tag="VLA74_10385"
     CDS             1116..1391
                     /locus_tag="VLA74_10385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51155.1"
                     /translation="MKITNSYKFESNITALNNGKIINKPKGYRFQIGDYLMYNKEKDF
                     YYNLSYAQIKNLYWNSDLIVGYVANDEINNNNGNKDKTSMIELSRSD"
     gene            1403..1810
                     /locus_tag="VLA74_10390"
     CDS             1403..1810
                     /locus_tag="VLA74_10390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51156.1"
                     /translation="MNSSNNINPKPCNYGCNTRIYWNATENTFFEVFSGKRHSCPNRS
                     TKKKSVITQTTTTNNKPKYYNANSRSFTTSVPKPKMSNSLELLQGPIVDIQRKYEILS
                     DIVSEANGKVHGSQSHIVTAANNNSTIISNHIL"
     gene            2005..2187
                     /locus_tag="VLA74_10395"
     CDS             2005..2187
                     /locus_tag="VLA74_10395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51157.1"
                     /translation="MVMMDGHYITTTEKEEVEEETFSSEDQISDYISIPGLNTRFSLD
                     GKDFDIFIIKELMDNA"
     gene            2407..2856
                     /locus_tag="VLA74_10400"
     CDS             2407..2856
                     /locus_tag="VLA74_10400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51158.1"
                     /translation="MGDAFKAILCIPYAIVVNNTDKKNNKYENWNYPLEINISNDNRS
                     IKVKIGNIDKIRRNEKIKVEKKYDQFQYRNKNEINEYNNNHFTEIVVYLPKIAVKYSE
                     IYNLLKKYIVLNTHIDFNIQLLPPPFIYQSKKTTSITSIYGYPKNKE"
     gene            2831..>3029
                     /locus_tag="VLA74_10405"
     CDS             2831..>3029
                     /locus_tag="VLA74_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51159.1"
                     /translation="MATQKIKNDWKNKLSIYYYSLTEFKHLIRSLEKSKDNLNIYDNF
                     IHTNFREGWRLKRDEFFNTLTY"
BASE COUNT         1275 a          365 c          460 g          929 t
ORIGIN      
        1 tatagacttc tagttttata ttattgtaaa ttagaataaa taaagaaaac tagaaataca
       61 aaagtataga attataatta gaatatttgg agccaaaaaa agtagtattt cgtttagatc
      121 atgatattct caaagacatt aaacgaatag cagtagaaaa agaagtaaca caaaatgatc
      181 tatttgttga aggcatgaaa tttattcgag aaaaatataa aaatttattg aaatgatttt
      241 agaacctcag gaatagaagt caaaatagtt tcaaattaat ctattacaca atagtctgga
      301 aggttgcata ttagttatat aaggaatgtc ctgaaaaaaa tttctagaat gctttggaaa
      361 tagatattca tcatactgtc agatatacgt aagttaatgt caaagaaagg aatgagccta
      421 taaaatattt ttagaaacac ttgaagaaat tgataaacat gaacaggaac taatataata
      481 gaagcaaatt aaaagactct tttagaatat attctctacc tctctccctc tagcaaagta
      541 tctttcctat taataaaata ctgttattgt gtttgaatta tgccaaacct tgatccctgg
      601 ataaatcagt atgagaatga ccagcaaata attactataa caacaatagc agaaaaagca
      661 acaaatagta agtttgaaaa tcatttatta tctgttaaga ctgaatgtca aaaaataatt
      721 aactctcatc aacatcctac ctttcttgaa cgttatcaaa agattataga aatgattgat
      781 tggactttgg aaagatatag aactgtaatt cagagaaatg aaattcaaca acaacaaaat
      841 gaaccagacc tagtaattat aaatagaatt agagaagaac ttgatgagaa aagaaaaatt
      901 gctatataca aaaataagca gtctgaacta agagacgaag tagcatgtat agacttgaag
      961 aaactactat tgattatgta ctatctgaaa tacgtgaatt tgtttatact aagtaaatta
     1021 ggataattaa agaaatggag atcgaattga atcaaaataa agagcacaag aagaaatgtc
     1081 taattcaata gtttgtaata gagaggtttt acttattgaa aataactaat agttataaat
     1141 ttgaaagtaa cattactgca ttaaataatg gcaagataat aaacaaacca aaaggttata
     1201 gatttcaaat aggtgattat ctcatgtata acaaggaaaa agatttctat tataatctca
     1261 gttatgcaca gattaaaaat ttgtattgga atagtgattt gattgttgga tatgttgcta
     1321 atgatgagat aaataataat aatggtaaca aggataaaac ttcaatgata gaattgtcca
     1381 gaagtgacta atggaaatag aaatgaattc ttctaataat attaatccta aaccatgcaa
     1441 ttatggctgt aataccagga tatattggaa tgctacagaa aatacatttt ttgaagtgtt
     1501 tagtggtaaa agacattctt gtcctaaccg ttcaaccaag aagaaatcgg taataacaca
     1561 aacaactact acaaataata aaccaaagta ttacaatgct aatagtagat catttactac
     1621 tagcgtacct aaaccaaaaa tgtctaattc tcttgaactg ttacaaggtc ctatagtaga
     1681 tattcaaagg aaatatgaga ttttgagtga tatcgtttca gaagcaaatg gtaaagttca
     1741 tggttctcaa tcgcatatag ttactgctgc aaataataat tctaccataa tatcgaatca
     1801 tatattatga agttcctgct gaaggtaaaa gagacgaagt caagcaaagg tttgaacaat
     1861 ttgatagaaa tacagtgttt atacataata gatagaaata ggggtaagtg cgaaatttgt
     1921 taatttttgt aggcatgacc aaaaaatctc taaaatctca cttgccaata actatttagt
     1981 tggtatagga aatagcagta gtaattggta atgatggatg gccattatat aactacgact
     2041 gaaaaggaag aagtagaaga agagactttt tctagtgagg accaaatctc cgattatata
     2101 tcgattccag gacttaatac tagattcagt cttgatggca aggattttga tatttttata
     2161 attaaggaat tgatggataa tgcataagac ttcattgaat ctaatgcaaa agaatttgtt
     2221 aatgggaaac gtccttttat tcatgtaatt ataactcaaa aaaacgatga agtaactaaa
     2281 attatagtaa gaaattccaa tggcggcata aataatattt tcactgatga acatattaac
     2341 aaaattttta atcttaatga atattacagt agcaaaaaat acagacataa gataaataga
     2401 ggtgaattgg gagatgcttt caaggccatt ttatgtattc catatgctat cgttgttaat
     2461 aatactgata aaaaaaacaa caaatacgaa aactggaact atcctttaga aatcaatatt
     2521 tcaaatgata atagatctat taaagtcaaa ataggtaata ttgataaaat cagaaggaat
     2581 gaaaaaataa aagttgagaa aaaatatgac caattccaat atcgtaataa aaatgaaata
     2641 aacgagtata ataataacca ttttactgaa attgttgttt atcttcccaa gatagcagtt
     2701 aaatattctg aaatttacaa tcttctgaaa aaatatatcg ttttaaatac acatatagat
     2761 tttaatattc aattattgcc gccgccattt atttatcaat ctaaaaaaac aacaagtatc
     2821 acgtcaatat atggctaccc aaaaaataaa gaatgattgg aaaaacaaat tgagtatata
     2881 ttactattct ttaaccgagt ttaaacattt aatccgtagt cttgaaaaaa gtaaagataa
     2941 tctaaatata tacgacaatt ttattcatac taattttagg gaaggttgga gacttaaaag
     3001 agatgaattt ttcaacacat taacttatg
//
LOCUS       DATIAS010000520         2791 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_912755, whole genome shotgun sequence.
ACCESSION   DATIAS010000520 DATIAS010000000
VERSION     DATIAS010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_912755"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..1025
                     /locus_tag="VLA74_10410"
     CDS             312..1025
                     /locus_tag="VLA74_10410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51160.1"
                     /translation="MKILANGSMVINLPYFNGRIATARESIHDGDTLYGVTSGIVSIR
                     FSGIDTPEVGYNLPTIKEDDLDEHQAKLYFEYRPIEDFIDYLTDPFDKKYFDSNNFLQ
                     ALGEDVVHNHLRKVLNEQTALNHKFHADRAREKLIQLIEDDIGYSISSGKEFKFYIAF
                     NHEILDRFGRFLGWIHRYEDSDSKDNKNRKKRYLSYNELMLKHGYAIPYFIWPNISPF
                     RREYSIIQSLPGKENFRLY"
     gene            1120..1389
                     /locus_tag="VLA74_10415"
     CDS             1120..1389
                     /locus_tag="VLA74_10415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51161.1"
                     /translation="MPFELRFLADSYTGFFNEPISCKNNENKKITNQRSSKKPLHRYV
                     IELSKLEDPVLRKPDQYYKITVEDHLFIDEHFVPLFREKGYEIES"
     gene            complement(1900..2217)
                     /locus_tag="VLA74_10420"
     CDS             complement(1900..2217)
                     /locus_tag="VLA74_10420"
                     /inference="COORDINATES: protein motif:HMM:NF012340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C1 family peptidase"
                     /protein_id="HSF51162.1"
                     /translation="MKISSYFNLGLNLSDWRRWIAENGPILTRLDVDETWDRATSTHG
                     NLDLYKPETTRGGHAVALVGYTPDRFIVRNSWGEGWGEGGYGYASNEYASAAFTEAYG
                     IEL"
     gene            2250..2540
                     /locus_tag="VLA74_10425"
     CDS             2250..2540
                     /locus_tag="VLA74_10425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51163.1"
                     /translation="MSGYNVEGLKGSSSTVTTPYLRATSKASFRRVHASSIKVVGRDE
                     KISISLDAIHIYLTDNCLSDGKSLFNEVPTKNGISVAHPTQDPVANWSPIFH"
     gene            complement(2537..2680)
                     /locus_tag="VLA74_10430"
     CDS             complement(2537..2680)
                     /locus_tag="VLA74_10430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51164.1"
                     /translation="MDNTNRILNCLPSKDMEDDWTIDTSVDSGILRAEGAIPESKDLR
                     EPS"
BASE COUNT         1069 a          390 c          397 g          935 t
ORIGIN      
        1 cttcttttgt attcaatctt atttctataa tgaatactca gacttaaata ttagttattc
       61 ttaattgtat ttttaaaaac taaaatatta tttataaatt aacgctaatt tgtaataaca
      121 atttcaacga tttcatgata caattaaaca ttctaacatt aaagaagata aataactgag
      181 ctggtaaaaa gttcattacc tacagaaaaa gattatgtaa aaaaaggaat aaaaatttta
      241 ttctatcatt gacataaata tatgacagca ttgacaaaaa aatttaataa taataaggaa
      301 atttctaaaa tatgaaaatt ttagctaatg gttctatggt cattaatttg ccatacttta
      361 atggacgcat tgctactgca agagagtcta ttcatgatgg agatacatta tatggggtaa
      421 catcgggaat agtttccatc agatttagtg gtatagatac accagaagtt ggttataatt
      481 taccaactat aaaagaagat gatctggatg aacatcaagc taaactttat ttcgaatatc
      541 gtcctattga agattttata gattatctta ctgatccatt cgataaaaag tattttgatt
      601 caaataattt tcttcaagca ttaggtgagg atgttgtaca taatcattta agaaaagtgt
      661 taaatgaaca aacagcatta aatcataaat ttcatgcaga cagagcaaga gaaaaactaa
      721 ttcaattaat tgaagatgat ataggttatt ctatttcttc agggaaagaa ttcaaatttt
      781 atatagcttt taaccatgaa attttagata gatttggaag atttctagga tggatacata
      841 gatatgaaga tagtgacagc aaagacaaca agaatagaaa gaaacgatat ctatcatata
      901 atgaactaat gttaaagcat ggatatgcaa tcccatattt tatatggcca aatatatcgc
      961 catttagaag agaatattca attattcaat cacttccagg taaagaaaac tttcggttgt
     1021 attgaagatg attttagact aagggacgca agaaagtata caaagcaagc aagagataaa
     1081 ggtattggaa tttttgaatc aaatcatcca ctcatgttaa tgccttttga attgagattt
     1141 ttagccgata gctatacggg attttttaat gaaccaatat catgcaaaaa taatgaaaat
     1201 aaaaaaataa caaatcaaag atcttcaaaa aaaccattac atagatatgt gatagaatta
     1261 tccaagttgg aagatcctgt tttgagaaag cctgatcaat actataagat aacggtagag
     1321 gatcatctat ttattgatga acattttgtt cccctcttta gggaaaaggg ttatgagata
     1381 gagagttagt actcaataca atttataatc ttatttaatt taaataattt ccatatatta
     1441 agaaaattat tttttcatac aagaaaatta aaaaaagtag atatcattgg tagatgaaat
     1501 catttgcata gatttttggt taaatccatt ctattaaaat actttcaaga cattatgaaa
     1561 atgatgatgc ttggatgcta aagaaaaagt atataataac tagaacaatt agtccacaat
     1621 aagaaaatta ttaatatata aaaaagttta tctaagatgt ataataaaag aaaaataaga
     1681 aaggaaaggt ttatcgaata agatcgattt agccaatatt aatattaatt acaatatttt
     1741 taataataaa ttagcaaata gaattttaat aaatattcaa tggatgtaaa ttctttacca
     1801 tgaacaaaaa taataaaaat gaaaattaaa tggttaaaaa actaagttag tatttttata
     1861 tatcataaaa atttattgta gtaatgtcat tctccattat tataattcta ttccataagc
     1921 ttctgtaaat gcagcactag catattcgtt agatgcatat ccataaccac cttctcccca
     1981 tccttctccc caagaatttc taacaatgaa tctgtctggt gtatatccta ctaatgccac
     2041 tgcatgtcct ccacgtgtag tttcgggttt atatagatct aaattgccat gtgtactagt
     2101 tgctctatcc catgtttcat ccacatctaa cctagtaaga ataggcccat tttcagcaat
     2161 ccatctacgc caatctgaaa gattaagtcc aagattaaag taacttgaaa ttttcatttt
     2221 agaagctaca gcatagaaat tttttttcct tgtctggata taatgtagaa ggattaaaag
     2281 gaagttcatc aacagttaca actccgtatt tacgagcaac atccaaagca tcttttagac
     2341 gtgtacatgc ttcttctata aaagtagtag gacgtgatga aaaaatatct atttccttag
     2401 atgccatcca tatatatctg actgataatt gtttatctga tgggaaatct ctttttaacg
     2461 aagtgccaac gaagaacgga atctctgtag cccaccctac acaagatcca gttgctaatt
     2521 ggtcacctat tttccactaa ctaggttcac ggagatcttt gctttcagga atagcacctt
     2581 ctgctctcaa tatgcctgaa tcaacagagg tatcaatggt ccaatcgtct tccatgtcct
     2641 ttgatgggag acaattaaga attctattag tattgtccat aatataatgg acacttaaat
     2701 ctataaaagc atttttatca ttttttttaa tatattataa tttctgtttt taatcgttat
     2761 ttataaaaaa atatatctaa tgcaggaata a
//
LOCUS       DATIAS010000521         2418 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1457477, whole genome shotgun sequence.
ACCESSION   DATIAS010000521 DATIAS010000000
VERSION     DATIAS010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457477"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VLA74_10435"
     CDS             <1..557
                     /locus_tag="VLA74_10435"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF51165.1"
                     /translation="KPGMGKSLFLKCIENSYHKHCIYLDCSLMTKAGLRDLLFEKRNR
                     LKILLLDEISRLKKIDQEILLNLLQDGRIIDTRSGNHREIKFSILKVFATCNELSKLI
                     EPLQDRFDRYDLPQYTIEDFNSICNRVIKVKDQDLKQKIISAVWDDLGSRNIRDVINA
                     SRYINTYDDLEKYIKIKKKYSIRS"
     gene            complement(694..1752)
                     /locus_tag="VLA74_10440"
     CDS             complement(694..1752)
                     /locus_tag="VLA74_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-binding protein"
                     /protein_id="HSF51166.1"
                     /translation="MNLDDVPSYTYFHHICLNLHLVHNTQYLYLIEQTILDSVMIFQN
                     KKIISFLPSATEILYEIGCSSQIVGVTHECKYPEDAKTKPKVINSSFDASAMTSKEID
                     KKIVELFSKGMDIYVVNDKVLTNLKPDLIVAQGICEVCSPFTKEIKRAISVLGYNPDV
                     LILDPHNLKDILTNIEEIAKKVDKVKEGQKLIESLTKKINLIQKIIETKNKVNLQRVL
                     CLEWIDPFFTAGHWIPEMVEIAGGINGLSKTGEQSRRTTMQEIKDFDPDKIILMPCGF
                     DTERTLIEYNRTIKKDIEWNSLKAVRNLEIYAVDAGSYFSKPGPRTFSGVEILAKIIH
                     PHDFKHITVPSNSFLRIE"
BASE COUNT          821 a          333 c          362 g          902 t
ORIGIN      
        1 gaaaaccagg aatgggaaaa tcgctatttc ttaaatgtat agagaatagt tatcataaac
       61 attgtattta tttggattgt agtttgatga caaaggcagg attgcgagat cttttatttg
      121 aaaaaagaaa tcgactaaag atattattgt tagacgaaat atccaggtta aaaaagattg
      181 atcaggagat attgctaaac ttgttgcagg atggtaggat aattgatacg aggtcaggaa
      241 atcacaggga gataaaattc agtattctga aagtatttgc tacctgtaac gagctttcaa
      301 aattgataga gccattgcaa gataggtttg atagatatga cttgccacag tatacaattg
      361 aggattttaa cagtatttgt aatagagtaa taaaagtaaa agatcaagat ttgaaacaga
      421 aaataattag tgcagtttgg gatgatttgg gatctaggaa tatacgagat gtaataaacg
      481 catcaagata tattaatact tatgatgatt tagaaaagta tataaaaata aagaaaaaat
      541 attcaatcag atcataatag atcataaatt gtaatttgac ggctgggaaa agaaaatctt
      601 aataataccc acttttgtta gtagcaatct atttaatatc actgtgcttg atacacataa
      661 tgattcaatt tttaatagaa atatcttgtt tgatcactca atccgcagaa atgaattaga
      721 aggaaccgta atgtgtttaa agtcatgtgg atgaattatc ttggccaaga tctcaactcc
      781 agaaaatgtt cttggtcctg gtttactaaa atatgatcca gcatctacgg catatatctc
      841 tagatttctt accgccttca aagaattcca ttcgatatct ttctttattg ttctattgta
      901 ttctattaaa gttctctctg tatcaaatcc acatggcatg agaataattt tatcgggatc
      961 aaaatctttt atctcctgca ttgtagtacg tcttgattgt tctccagttt tacttaaacc
     1021 atttatcccg ccagctattt ctaccatctc tggaatccag tgtcctgcag taaaaaatgg
     1081 atcaatccac tctaaacaaa gcactctctg taaatttact ttgtttttcg tttcaattat
     1141 tttctgtatc aaattaatct tttttgtaag agattctatc aatttttgac cttctttcac
     1201 tttatctact tttttggcta tttcttctat attagtcaaa atatctttta gattgtgagg
     1261 atcgaggata agaacatctg gattatatcc taacactgaa atagcccgtt tgatctcttt
     1321 tgtaaatggg gaacatactt cacatattcc ctgtgctact attaggtcag gttttagatt
     1381 tgttaacacc ttgtcattta cgacatatat gtccattcct ttgctaaata attcaacaat
     1441 tttcttatct atttccttgc ttgtcatagc tgaagcatca aaggaagaat ttatcacttt
     1501 aggttttgtt tttgcatctt ctggatattt gcactcatgt gtaacaccca ctatttgaga
     1561 actgcatcct atttcataaa gtatttctgt tgcgctaggt aaaaatgaaa taattttttt
     1621 attttgaaaa atcattacac tatctaagat ggtttgctct attaaatata gatattgggt
     1681 attgtgaact aaatgtaaat ttaaacaaat atgatgaaaa tatgtatatg aaggaacatc
     1741 gtctaaattc attttatttc ttaatttatt tctttattat tcagtgcaaa gaagatagat
     1801 attgaatcaa atctattatt ctataatgga ttatataatg tctaacttga aggatcaaca
     1861 ttctgcattt ttatgcagta atagtataca tcggaaatta gcaattcttg aaatgccaat
     1921 aatggcttta gaaaaacaaa gtattattta caacgaagta tataacatca ggattgaggt
     1981 cataaattgg atctgttgga aaattgaatc aaaataaata tatttctaat tcaagttcat
     2041 tttccctatc tttcaaataa taagatattt gaattttaag attgacactt tatacaactt
     2101 tttgagatta atggatctag ctattttaaa cctttctagc taccagaaat attcattgct
     2161 cgataaaatt atttttaata atcaaatgat ttaatatata ttttattgaa agtacctaat
     2221 tatgtattta ttgccatttg aatttattta taatatagtt taagtaaaca gctttttaat
     2281 atgtaaccaa cagaaaccct ttgttattga agcctattat agaatcgtaa tattttttgg
     2341 atgttcgtat gcatatgtta tattaaatat ttgattttct ttcacatttt tgcttattgt
     2401 gatttgcggt aaatagat
//
LOCUS       DATIAS010000522        11078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_504177, whole genome shotgun sequence.
ACCESSION   DATIAS010000522 DATIAS010000000
VERSION     DATIAS010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 11078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11078
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_504177"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(349..1245)
                     /locus_tag="VLA74_10445"
     CDS             complement(349..1245)
                     /locus_tag="VLA74_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51167.1"
                     /translation="MFNLLSIFGEFGEVWELLKKKDFPSQIKFSDPQTNNTIEILIFA
                     HTNNEINFNIKVYANNKQINTVNLNQSSLIFFQKQYSQYIKQVSTLKIMLPDNLKNKV
                     NFFSEISSFFKLSWKFINQFEIQPILFYPFTLLDVYSIDDYNKNIVSRTIMRSFDKIN
                     VINNSYIDKKKILLEIHNLNVALVDIIVQNRIKLILKMFTLGTRFFIRFVRIYLFIFG
                     ALFNIIFFLNENPQISDINLSTKIFEFIRSNESIVLPIIVNAIISIIWFLLPRIIRKI
                     ITMRLQKRNNIIQLNKFFSKFK"
     gene            complement(1268..1717)
                     /locus_tag="VLA74_10450"
     CDS             complement(1268..1717)
                     /locus_tag="VLA74_10450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51168.1"
                     /translation="MTSDFYVMSDIPPQINFEKVKADFAARCEQLNILLEQWINDVRS
                     MDIVTATSDNLTVKIDPKEASLVEGLPQEVKIKARTTIQLDGDLIVLLPTKPGTENTV
                     QIDNDILTIHKENVDFALKNLSNNLKLITDGIIKGLELSKDYGLLKV"
     gene            2342..3463
                     /locus_tag="VLA74_10455"
     CDS             2342..3463
                     /locus_tag="VLA74_10455"
                     /inference="COORDINATES: protein motif:HMM:NF017773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51169.1"
                     /translation="MRFLLPKNFITLLIAASMISYFILYSAGSIFGQPVTAAPLYTST
                     RNFFDTNTGTFLHSGLSPEPPASSLFNQEANKCPNEIAIYVHGVWASEDSAKEQTERV
                     GLSLASLNNTIQLIGYTWDSDTPFDRDDPFLSQEGWNIAKIIAKENGPLLAKFIIDFK
                     NNCPNSDIRIMAHSLGSRVVLSALDYLFNHQNEVNINNQTSKIIKSVHLMGAAVDNEE
                     VSLNSINHLKNPLLWSAIPSCTFDESGIKFAYGNSIQNIVEDFYNLVNSEDNVLQFFY
                     PCAEGGNDALGQSGKDDDNSVQAPTNYHDIEGIEGEIKPGLDANADGEADFGLCLLAL
                     CDRDEGDNHAGYMGYRDILDEDTIDDDGVIDRVVQLWGP"
     gene            complement(3644..3844)
                     /locus_tag="VLA74_10460"
     CDS             complement(3644..3844)
                     /locus_tag="VLA74_10460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51170.1"
                     /translation="MIGGNLSLILTHNLKNCNISPKLEHNPNNGTNINIERELKSALI
                     ERAKLPLPESSDKCTTLEGCQM"
     gene            4428..5738
                     /locus_tag="VLA74_10465"
     CDS             4428..5738
                     /locus_tag="VLA74_10465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51171.1"
                     /translation="MPKEVQEWVTRTQQQIDYNSHFSQIQALKIMMDTMLARQKKLLE
                     KLSLIKEPADFERTLFSLIIEIIKVQQIWDFFRDKLELRFSPNFKDPLAIADTVAWDC
                     YRPTLNKAQEFGIISQDRFREPPLTYLTAEFSPATWVRGSRPDDGRDYLNGTVVLPIP
                     VIEIPWDHVVNIWEFLSLPHEVGHDIEADLGLRPVFQNSLAQQLRQNGVPEPRVRIWV
                     SWEAEIVADLIGLLLAGPAFAYYMVNLLTLSPEAVTTYDDDDPHPSHYLRIFINTAFI
                     KTLLVGDSTLVEDAKHLDDLWTQLYGNLTQLGNHSVADFKSDFDIVFKALIDTKFEAL
                     QKHSVREIIPFTNQDNATIRATVEFLVTGQNRPSNIRPRHIISASRLAVDRIMSQADN
                     QSTKLTELNTRTAELVKANTPPGLRAAEDSQKHRAFIVSLAEAI"
     gene            5769..7094
                     /locus_tag="VLA74_10470"
     CDS             5769..7094
                     /locus_tag="VLA74_10470"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HSF51172.1"
                     /translation="MSTLPIRDLFIEIKPRSGAGESNILKLWTKESEILKTTTTKIIG
                     EIANRKLEDIQEQAARLLGTSPDRSLLREVGKFLFEFLPSSISSFIQHEYELVKEDQQ
                     ILGLKIVSKDPGSIDLPWELLYITPQEEFLALHPNASIIRYVPVPTSSPPLIVEPPLR
                     IVFVLTNPKDERLMRADEELNAIKGTIDNMSSFQTDVLWEPTLEAFRKKLVEIQPHII
                     HYIGHGGIGRGEGNLILHDSLDKTYWLSPTELSTILPPTVLLLCLSTCFTSRNYQIQA
                     FNRLGQTWGQYNLPSMVVNQFPLSREGVSVFWREFYSTLREAGELMTSIKRSRQEVAQ
                     SHPLSVDWASFVLHLRSPSDKLFSYIPPEITTRRAINRTELSMERRKVKALEIQINSL
                     TSILNNLKMQVSNFDNPPAGLQKAIEGTEKRHYDLLSELRSVKASLVPG"
     gene            7108..8919
                     /locus_tag="VLA74_10475"
     CDS             7108..8919
                     /locus_tag="VLA74_10475"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HSF51173.1"
                     /translation="MQEIRIEISSDITGADTSLLVNVVKSPIPGLAGTRNNVQVSMSR
                     AELIKLRSKPAQLDLQFLRNLGEQIQKNLGPNIWPVIQASRQAKPEETFRIVIIVHDS
                     AIRPLGQSLVQPDEIPIELIRDLNNDFYALNYRTPIVRGVSIDPDRPTKNIIVPLKIL
                     IVVSTPSDKPPSSIDKEKKVIQQSLQNYLADENTGSEGKILIRWCIPATKMAFDHMLT
                     DFNPHVVHFIGHGGFDTNQEGGVSQGYLCFEQEDNDSSDPMTADDLAVLLRNTSSPVG
                     LFVLTSCSSAQPKDEFEEEEGYNTYLNKGYNPFAFEGVAQKLVAGTSGVTAAVAMQFD
                     IEDVAAVEFTRTFYEQLFKPNITIEEVVTRARIAIVRRMTIAHPAWINPVLFTRSIDG
                     IIFNIQTPVGELTPQEKSELAELDRELRSYHYAADQSREMISTIPPDMQDMVRPQLTD
                     FLNKIEQVELQRSQILGDSVRIHGIRTRKNLDIELPVSLHIRIPTNVDRIQFDVQYPA
                     DVLLNAQVGAGKDTPTITPALARQDINTISVMLVWPPGNSTQFNTGEFEIAKLVFHVS
                     PTASSGFSEISIRNIGIYHNNSLVGNRGMSQALFVED"
     gene            complement(9364..9615)
                     /locus_tag="VLA74_10480"
     CDS             complement(9364..9615)
                     /locus_tag="VLA74_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51174.1"
                     /translation="MVNIPNFTASLSIRAMEQVHYNKKNTSTHYNSHNSIYPSLMSYD
                     DCLCQCYTCWQLPEGGCDPATCLTFPPHDECMKQCLEWN"
     gene            complement(9796..10692)
                     /locus_tag="VLA74_10485"
     CDS             complement(9796..10692)
                     /locus_tag="VLA74_10485"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSF51175.1"
                     /translation="MDPLDLINLRQLMDRTSGHNDIKIGVIDGPVDFNHSQLKNAKIK
                     TISDSQFIQCKNSTSVACMHKTFIAGILSGLRNSTSLAICPQCPILLRPIFKDGSSLS
                     VSDNYNDINLPISTPQELAKAIIETIDAGAKIINLSIGISLSSLVTYPELQQAYDYAL
                     RNHVIIIAASGNQGSLGYAPTLYHPWVIPVASCDEYGKISAISNLGSLMARRGIMAPG
                     TKIRSIVPNNKFSYMSGTSFVAPFVTGTIALLWSVFRYATSTDIITSIINADPNSKNR
                     RSLIPPLVDAEVAFKKLYKIFY"
     gene            complement(10757..>11078)
                     /locus_tag="VLA74_10490"
     CDS             complement(10757..>11078)
                     /locus_tag="VLA74_10490"
                     /inference="COORDINATES: protein motif:HMM:NF037034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51176.1"
                     /translation="NSEGEFYKIMQMADNFGATDEHRALNYLAVRYPGYYEKTTQMYE
                     QESSLTNIEVRPSRLAGTRKILDCIFTYKNRKTDVDEKYFCRIDTTEMFPFLVTKMSY
                     YYDR"
BASE COUNT         3693 a         1827 c         1849 g         3709 t
ORIGIN      
        1 atgcaaaaag atgaatgcaa tctattacat gtacaaaatt ggatacaatt ttttgtatct
       61 atgtataatg atacaatagc aaataataat aattattttg agttagagga ggtgaatata
      121 tcttaaatta acagagccta aaaaaggatt attttatatt atgtctcgaa agttaaagag
      181 ttgtagaatt acatctcatt aatttatttc taaattctag acaatattgt agtttctcca
      241 aaaacatcat ataattcttg taaaatacct ctcaatacta ttattcatta tttaaaaatg
      301 taaattggtt taatagataa ttaaatatga aaatatatcc tcttgaaatt atttaaattt
      361 agaaaaaaat ttattcaatt ggattatatt attccttttt tgtaatctca ttgttattat
      421 ttttcgaatt attctgggta aaaggaacca aataattgaa attattgcat taactatgat
      481 tggcaaaaca atcgactcat ttgaacgtat aaattcaaaa atctttgttg acaaattgat
      541 atctgaaatt tgtgggtttt catttagaaa aaatatgatg ttgaaaagtg ctccaaagat
      601 aaaaaggtat atcctaacaa atcttatgaa aaatctagtt ccaagagtaa acattttcaa
      661 aatcaatttt attctattct gtacaatgat gtcaactaat gcaacattca gattgtggat
      721 ttctaataag atcttttttt tgtctatata agaattattg ataacattga ttttatcaaa
      781 tgatctcatg atggttctag atacaatatt cttattgtaa tcatctatag aatatacatc
      841 taataaagta aaaggataaa agagaattgg ctgaatttca aattgattaa tgaatttcca
      901 agataactta aaaaaggaag atatttctga aaaaaaattt actttatttt ttaaattatc
      961 tggtaacatt atttttagtg ttgatacctg tttaatatat tgactatact gtttttgaaa
     1021 aaaaataagt gatgattgat ttaaattaac ggtatttatt tgcttattat ttgcataaac
     1081 cttaatgtta aaatttatct cattgttggt gtgtgcaaat atcaaaattt caatagtatt
     1141 gtttgtttgt ggatcagaga attttatttg agatggaaaa tcttttttct ttaataattc
     1201 ccatacttct ccaaattcac caaaaattga taataaatta aacattcgtt atggttataa
     1261 atttttctta tacctttaat aacccataat cttttgataa ttcaagtccc tttataattc
     1321 catcagttat aagctttagg ttgttggaca aattttttaa agcaaagtcg acgttttctt
     1381 tatgtattgt caagatatca ttatctattt gtactgtatt ctcggttccg ggttttgtag
     1441 gcaataaaac aataagatct ccatctaatt gaatagttgt tctggcctta atttttactt
     1501 cttgtggcag accttctact agacttgctt cttttggatc aattttaact gtaagattat
     1561 ctgaagttgc cgttacaata tccatagaac gtacatcatt aatccattgt tctaacaaaa
     1621 tattcaattg ttcacagcga gctgcaaaat cagccttgac tttttcaaaa tttatttgtg
     1681 gtggaatgtc actcataaca taaaagtctg atgtcactat tatttaagtt agacggttct
     1741 tttaaaactc aacaattaga tatcctatga aaaaaacatt atcaatagtt tagtttttat
     1801 taaatagtaa cttaatatta aaattttttc ggcgccggaa aattattatt gccacaataa
     1861 aagaaattat agactataat aaacaataga aaaaaacaaa ttattcaact atattagtat
     1921 taattaatta attaattaat ttttattctg ctatcgtttt tggtaaaaac tttatattat
     1981 taatatttat atcttaactt tttaaatagt tcatttagca gatcactata aagaataaaa
     2041 tttgatggag aaaatatttg aaataatcat gagattatgc tataaatcac tataataatc
     2101 ttgattatag aagagaaaaa agatgattca aataaaaata attatttgat aattatagaa
     2161 atgtaattaa ttattttcac gacaattcaa tcaaatattc tgtattactg acataacaat
     2221 aatttgaaat tgaatataag atagataaat aaaatatatg tattttagaa catgctaaac
     2281 gattctaata ataattttag agataaatag ttttataaac aatatctttt aattagaaaa
     2341 tatgagattt ttgctcccta aaaattttat tactttgtta atagcagcat caatgatatc
     2401 atattttatt ctatattcag ccggatctat ttttggccaa cctgtaactg cagcaccatt
     2461 atatacttca accagaaact tctttgatac aaatactggt accttcttgc atagcggctt
     2521 gtcaccggag ccccctgcat cttcactttt taatcaagaa gctaataaat gtcctaatga
     2581 aatagcaatt tatgtccatg gtgtatgggc ttcagaagac agtgccaaag agcaaactga
     2641 aagagttggt ctatctcttg ctagtcttaa caatactatt caactaatag gatatacttg
     2701 ggattctgat actcctttcg atagagatga tcctttttta tctcaagagg gatggaatat
     2761 tgctaaaata atagcaaagg aaaatggtcc tctattggct aaatttataa tagattttaa
     2821 aaataattgt ccaaatagtg acatcagaat tatggcacat tcattaggtt ctagagttgt
     2881 tttatctgcg ttggattacc tttttaatca tcaaaatgaa gttaatatta ataatcagac
     2941 atctaaaata ataaagtctg tacatttaat gggagcggca gtagataatg aggaagtatc
     3001 attgaattct attaatcatc ttaagaatcc tcttctatgg tccgctattc cgtcttgtac
     3061 ctttgatgaa tctggtataa aatttgctta tggaaactct atccaaaata tagtagaaga
     3121 cttttataat ttagtaaatt ctgaggataa tgtattacaa tttttctatc catgcgcaga
     3181 aggtggaaat gatgcattag gacagagtgg aaaagatgat gataattcag tacaagcacc
     3241 aacaaattat catgatatcg aaggtatcga aggagagata aaacctggtt tagatgctaa
     3301 tgcagatggt gaagccgact ttggtttatg tttattagct ctatgtgata gagacgaagg
     3361 tgataaccat gcaggatata tgggttatag agatatccta gatgaagata caattgatga
     3421 tgatggagta atagaccggg tggtacaact ttggggacct taataaaatt ttaataataa
     3481 attttccggc gccgaaaaaa ttttttacct aatttttttt taagaaatta agctttaaat
     3541 tgtttaaacg attctaagtg taaaaatcta ctactaatta tttttaggat tatacactca
     3601 atagtgagat tgagaattaa aaaaatagaa taaaggaatt ccatcacatt tgacaacctt
     3661 ctaaggtagt acatttgtct gaggattctg ggagtggtaa tttcgctcgt tctattaaag
     3721 ctgatttgag ttctctttca atatttatgt tagtaccatt attgggatta tgttctagtt
     3781 ttggagatat attacaattt ttcagattgt gagtaagaat taagcttaga ttaccaccaa
     3841 tcatacttta gaaagttaag tcttctgatg cttactgagc cgaaagtaat ccattatgat
     3901 ttttgtccaa tacttgttta gattataaaa gtggcaacgt tatcattgaa attctaatag
     3961 ttcacttatg ttttgtgctg ctgcagccat aagtactata ttttttactt tatctggatt
     4021 atcaattgca attctaggtc aattgcaatt aaaggtctta tgactgtacc ttcactatgt
     4081 cctaatcatg ttattctatt agaatcaact tcgggttgtt gtattaatac tgctaaagct
     4141 ttgtttgcat cttgtaatag gacactaatt gtcatgttgc cccatacgtt gctatcaaca
     4201 attaaatgat tttcatctat atctcttttg tagtatagaa gtgtaacaaa tccggtcagc
     4261 taatgtgcga tattggtatc atcaaaactt ttatatcttg cagtactggc acttctttaa
     4321 atgaacatag acttgaaatt agatattctc gataaaggag atgcaaaatg actcttccct
     4381 tatctctagt aactcgtcgt ctcgagctac aacgcaggtt agacgcattg ccaaaagagg
     4441 tgcaggaatg ggttactaga actcaacagc aaattgatta taatagccac ttcagccaga
     4501 tacaagcatt aaagataatg atggatacta tgcttgctcg tcaaaaaaaa ctacttgaaa
     4561 agctttcctt aattaaggaa cccgctgatt tcgaacgtac ccttttctca ctcataatag
     4621 aaataatcaa agtgcagcag atatgggatt tctttcgaga caaactagaa ttgcgtttct
     4681 ctccaaattt caaagatcct ttagccatag ctgacaccgt agcctgggat tgctatcgcc
     4741 ctaccttaaa taaggcgcag gaattcggaa ttataagcca ggatcgtttt cgtgaacctc
     4801 cacttacata tcttactgct gagttctctc ctgcaacatg ggtccgtggt tctcgtcccg
     4861 atgacggaag agactattta aatggaaccg ttgtgctacc aataccagtc attgaaattc
     4921 cttgggatca tgttgttaac atatgggagt tcttatccct accccatgaa gttggacatg
     4981 atatagaagc agatctaggc ttacgccctg tgtttcaaaa ttccctagca cagcagcttc
     5041 gtcagaacgg tgttccagaa ccacgtgtcc gtatttgggt atcctgggag gcagaaatcg
     5101 ttgctgactt aattggttta ttgctcgctg gacccgcgtt tgcttattac atggtcaatc
     5161 tccttacgct atcaccggag gctgtgacga catatgatga tgatgatcct catccgtctc
     5221 actacctaag aatatttatt aatacagcat ttatcaaaac tttgttggta ggagattcaa
     5281 ctcttgtgga agatgcaaaa catctagatg atttgtggac tcagttatat ggtaatctca
     5341 cccagttagg taatcacagc gttgcagact tcaagagcga ctttgacata gtttttaaag
     5401 cgcttattga taccaagttc gaagctctcc aaaaacacag tgtaagggag atcattcctt
     5461 ttactaacca agacaatgca acaatccggg ctaccgtaga gtttctggtc acaggtcaaa
     5521 ataggccatc aaatattcga ccacgacaca tcatcagtgc atctagatta gctgtggatc
     5581 gaattatgtc acaagctgac aaccaaagta ctaagcttac tgagcttaat acgcgcaccg
     5641 ctgaattagt caaagcgaat acgccgccag ggttaagagc tgcagaggat tctcaaaagc
     5701 atcgtgcatt catagtatct cttgcagaag ctatttaaat aaacaaggct atcgtatacg
     5761 aatatgctat gagtacgtta cccattcgag atttattcat tgaaattaag cctagatctg
     5821 gggcagggga aagcaatata ctaaagcttt ggacaaaaga gtccgaaatc ctcaagacta
     5881 ctactactaa gataatagga gagatagcaa accgaaaatt agaagatatc caagaacagg
     5941 ctgccagact gctgggaaca tctcctgacc gttctctact tcgtgaagtt ggtaagtttc
     6001 tatttgaatt tctgcctagc tcgatctcaa gctttattca gcatgaatat gaacttgtaa
     6061 aggaagatca acagattctt ggactaaaga ttgtgagtaa ggaccctgga tctatcgacc
     6121 tgccatggga gctactgtat ataactccac aagaggaatt tctagcgctt catcctaatg
     6181 cctccatcat cagatacgta cctgttccga cttcttctcc acctctaata gtagaacccc
     6241 cactgagaat tgtatttgtc ctcacaaacc ctaaggatga aagattgatg agagctgacg
     6301 aagaactcaa tgccataaag ggtaccattg ataatatgag ctcttttcaa actgatgtcc
     6361 tatgggaacc tactctagaa gcatttagaa agaaattggt tgaaatacaa ccgcatatta
     6421 ttcactatat aggccatggt ggcataggaa ggggtgaagg aaacctcatt ttacatgaca
     6481 gtttagacaa aacttattgg ttatctccaa ccgagctttc cactatcctt ccaccgactg
     6541 ttctgctcct gtgtctgagt acttgtttca cttcgagaaa ctaccaaatc caggctttta
     6601 ataggttagg ccaaacatgg ggtcagtata atcttcccag tatggtagtt aatcaatttc
     6661 cactctcaag agaaggtgta agtgtgtttt ggcgcgaatt ttactcaact ctacgcgaag
     6721 cgggagaatt gatgacctcc attaaaagat ctagacaaga agtagcccaa tctcatccat
     6781 tatcagttga ttgggctagc tttgttcttc acttgcgcag tcctagtgat aagctatttt
     6841 catatatccc acccgaaata accactagac gagcaatcaa taggacagaa ctttctatgg
     6901 agagacggaa agtaaaagct ctagagatcc aaataaattc cctaacatca attcttaata
     6961 atctcaaaat gcaggtcagc aactttgaca atccccctgc cggtcttcaa aaagccatcg
     7021 aaggaacaga aaaacgccat tacgatctgc ttagtgaatt gagaagcgta aaagcttcgc
     7081 ttgttcctgg ttaggtgaca ttaacccttg caggaaatta gaatagaaat ctcttctgat
     7141 attacaggag cagatacttc acttttagta aatgttgtaa aatctcctat accaggctta
     7201 gccggtacta gaaataatgt tcaggttagt atgtctcgtg ctgaattgat taaacttcgt
     7261 agcaagccag cccagcttga tttacaattc cttcgaaatc taggggagca aatacaaaag
     7321 aacctcggtc ctaatatatg gcctgtgatc caagcatcaa ggcaagctaa gccagaagaa
     7381 acattccgaa tagttatcat tgtacatgat agtgctattc gaccgctagg ccaaagtctg
     7441 gttcaacctg acgagattcc aatcgaactt ataagggatt taaacaatga tttttatgct
     7501 ttaaattatc gtactccaat agtcagagga gtctcaattg acccagatcg acctacgaag
     7561 aatataattg tccctttgaa aatactcatc gttgtttcta ctcctagcga taagccaccc
     7621 tcctctatag acaaggaaaa gaaagttatc caacagagtc tacaaaacta cctcgctgat
     7681 gaaaatacag gttctgaagg aaaaattttg atacgatggt gtatcccagc aacaaaaatg
     7741 gcttttgacc atatgttaac agattttaac cctcacgtgg tgcattttat tggacatgga
     7801 ggatttgata caaaccaaga gggtggagtg tcccaaggtt acttatgctt cgagcaggag
     7861 gataatgact cttcagatcc gatgactgca gatgatctcg cagtactttt gagaaacact
     7921 tcttcccctg taggcctttt tgtcctcaca tcctgttcaa gcgcccaacc taaagatgaa
     7981 tttgaggagg aggagggata caatacctat ttgaataagg gatataatcc atttgcgttt
     8041 gaaggtgtag ctcaaaaact tgtcgcagga acttctggag taactgctgc agtggcaatg
     8101 caatttgata tagaagatgt tgctgctgtt gaatttactc gcacttttta tgaacaactt
     8161 ttcaagccaa atattaccat agaagaagtt gttactcgcg cgcgaattgc tatagtcagg
     8221 agaatgacta tagcacatcc agcttggatc aatccagttt tattcactcg ttcaattgat
     8281 ggaattatat ttaatataca gactccagta ggtgaattaa cacctcaaga aaaatcagaa
     8341 cttgcggagc tagatcgaga attaagatcg taccactatg cagcggatca gtcaagagag
     8401 atgataagta caattcctcc tgatatgcaa gatatggtta gacctcaatt gacagatttt
     8461 ttgaataaaa ttgagcaagt ggaattacag cggagccaaa ttttaggaga ctcagttaga
     8521 atacacggta tacgaacacg gaaaaatttg gatatagaat tacccgtaag cttgcatatt
     8581 cgcatcccta ctaacgtaga ccgaatccag tttgatgtac agtatcccgc ggatgttctt
     8641 cttaatgcac aagtaggagc aggtaaagat accccaacaa ttacccccgc tttggctagg
     8701 caagatatta atactattag tgttatgcta gtatggccac caggaaattc tactcaattt
     8761 aatacaggag aatttgaaat tgctaaactt gtttttcatg tctctccaac tgcatcttca
     8821 ggtttcagtg agattagtat aagaaatatt ggtatatatc acaataacag cttggtaggc
     8881 aaccgtggta tgtctcaggc actatttgta gaagactaat taaaatatac cctattttat
     8941 attcttggaa tattatgtaa ctatgcatca tcttttttga aatatccaga gtctctctgt
     9001 ataatagttg cttcaatatc tatgttttct cgaacgtatc taattcattt ttcattgagc
     9061 taggcgaagt agagagtaat acttatagcg gttctaaaat aagagtctat tttagagata
     9121 ctactatctt gtctctatgt cttattattt agaaacttat tttcaaattt ttttaaaaac
     9181 tgttgagaaa aataaatttt caatttatct ccgagttcag agggatttga acttgactaa
     9241 aagataggtt cacttaatat tttaaatata ttatataacc aataatatat atatttaata
     9301 atccaaaaat gacaaataga aatagtaact attatttatg ttattaaaaa actaaaaatt
     9361 tatctagttc cattctagac actgtttcat acattcatca tggggtggaa aagtcagaca
     9421 cgtagcagga tcacatccac cttccggtaa ttgccaacag gtataacatt gacaaagaca
     9481 atcatcatag gacattagtg aaggataaat tgaattatgg gagttatagt gtgtacttgt
     9541 atttttttta ttataatgga cttgttccat ggctcggatt gataaagatg cggtgaaatt
     9601 aggtatatta accattaaaa agatatgttt ttaatcttat ataagatttt tcatatttta
     9661 gtattaagat gattaattga attcaaatct ttaatttgtt cgttctattt ttgtcaaata
     9721 aatataggaa tactctttaa aaaattttat ttttatatgt ctaattgtaa tactaaaaaa
     9781 attagttcat taatactagt agaaaatttt atataatttt ttaaaagcta cttctgcatc
     9841 aaccaatggt ggaattaaag atctgcgatt tttactgttt ggatctgcat taattataga
     9901 agtgattata tcagtacttg ttgcataccg aaaaactgac catagaagag caatagttcc
     9961 tgttacaaat ggagctacaa aacttgttcc actcatataa ctaaatttat tatttggtac
    10021 aatgcttctt atttttgttc caggagccat tatgcctcgc ctagccatta aagatccaag
    10081 attagaaata gcagatattt taccatactc atcacaagaa gcaacaggaa ttacccaagg
    10141 gtgatataaa gtgggtgcat atccaaggct tccttgattt ccggaagctg ctattataat
    10201 aacatgattt cgtaatgcat agtcataagc ttgttgaagt tcaggataag tgacaagtga
    10261 agatagggaa attcctatac ttaaattaat tatttttgcc ccggcatcta tagtttcaat
    10321 aatcgctttt gctagttctt gaggagtgct tattggaagg tttatgtcat tataattatc
    10381 tgataccgat aaagatgaac catctttgaa aattggccgt aataaaattg gacattgtgg
    10441 acatatcgcc aatgaagttg aatttctaag accagataat attccagcta taaatgtttt
    10501 atgcatacat gcaacactag tagaattttt gcactgtata aattgagaat ctgaaatagt
    10561 ttttatcttt gcatttttta attgagagtg attgaaatct actggtccat ctattacacc
    10621 tattttaata tcattgtgtc cgctagttcg gtccattaat tgacgcagat ttattaaatc
    10681 tagagggtcc attattagtc ttctttaacc aattataata aaaaattatt tttatttttt
    10741 atttgtctat ctctttttat ctatcataat aataggacat ctttgtaact aagaatggaa
    10801 acatttcagt tgtgtcgatt ctacaaaaat atttttcatc aacatcagtt ttacgattct
    10861 tgtatgtaaa aatacaatct aaaatttttc tagtacctgc cagtctagaa ggacgcacct
    10921 caatattggt taatgaagac tcttgttcat acatttgtgt tgttttttca tagtatcctg
    10981 gatatctaac tgccaaataa tttagagctc gatgttcatc tgtagcacca aaattatctg
    11041 ccatctgcat tatcttgtag aattcgcctt ctgaatta
//
LOCUS       DATIAS010000523         4025 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_504255, whole genome shotgun sequence.
ACCESSION   DATIAS010000523 DATIAS010000000
VERSION     DATIAS010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_504255"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /locus_tag="VLA74_10495"
     CDS             complement(<1..741)
                     /locus_tag="VLA74_10495"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSF51177.1"
                     /translation="MTNKNEIKFAYYIYQQGLEYKDIRHIVLECERLGFDSVWLKDNF
                     TFSWLNAYFSDKEDEKPNSEDPILECWTTLSSLATLTKRIRLGAILVNIHRIPSVTAK
                     MVSTLDVISNGRIEFGLSAGWYENEIKSYGLPFPRASTRVEMLDESIIIIKRMLTENQ
                     ASFEGKHYTIKDAKCSPKPIQKPHPPIWIGGGGKKTLQLVAKYADGWNYGLCIYEEYL
                     SKLSILRDCCKAVGRDYEKITKAWHAIML"
     gene            1418..2515
                     /locus_tag="VLA74_10500"
     CDS             1418..2515
                     /locus_tag="VLA74_10500"
                     /inference="COORDINATES: protein motif:HMM:NF039195.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PsbP-related protein"
                     /protein_id="HSF51178.1"
                     /translation="MKWISIIIILLSVFSFSIFTNDLIMQNNIIYAQVEPPLPSSPSL
                     PSSPSSQSSDPLTTAQSILKTLDENAVKALEKTNTIEPPLPSSPSSEALTTPQSILKT
                     LVDDAGEALKKTNTTKTLLNLNIVLQALKESNENSSSIEATKLLLNDAIQALNNNDTT
                     RASAYMGLASQQLGVEPSKVDTQSTTSNTNTIASKNYLLYENPTVGIKIKYPDNWSLR
                     TYSYNPVLNNTVAGFYSPSKTASEIGNISGVTGLFVPYVDIFVFSSKNMSLDEIIDSR
                     IDRIQNSTYSLIDESKPFTLKGNQPAYILIYSINSGKDELFKKMQVYTIYSNKVYLIT
                     FTSQEALFAEYRPTIEEMVNSFELLKRTSLQ"
     gene            complement(2619..3554)
                     /locus_tag="VLA74_10505"
     CDS             complement(2619..3554)
                     /locus_tag="VLA74_10505"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSF51179.1"
                     /translation="MTLFPFTTSSFIGLLIVFSLYSIVYHFDKLFAEPGSSSIPKEQL
                     LDIIESLQLNPDLIDEPGSSSTSEEQLLDIPADLQLNPDLIDEPGSSSIPKEQLLDIA
                     EGLQLNLGVLIDIIRQFIDMIRQFLESRAIGSLRESGCIASALTGGTSDITIDGNLII
                     GTSCDDVIDGSRKNELIYSLGGIDQVYAKDGNDIIYGGIGDDRLYGGKGDDIVTSGVG
                     SNLLDGGPENDILIAGPGNNLLVGGDGNDVLMGGAGTTIMYGGAGMNTFDCGIGKGIV
                     LDYNPENGDTVAGQCKILNNIGVDFPSEPEIKPPK"
BASE COUNT         1418 a          686 c          531 g         1390 t
ORIGIN      
        1 aagcattatt gcatgccaag ctttagttat tttttcatag tctctaccaa ctgccttgca
       61 acagtctctg agaatggata atttacttag atattcctca tatatgcaaa gtccatagtt
      121 ccaaccatct gcgtatttag ctaccagttg tagggttttt ttacctcctc cccctatcca
      181 tataggtgga tgtggttttt gaattggttt tgggctgcat ttagcatcct ttattgtata
      241 atgtttaccc tcaaatgatg cttgattttc agttaacatt ctcttaatta tgataatgct
      301 ttcatctaac atttcgactc tagttgatgc cctagggaat ggaagtccat aagatttaat
      361 ctcgttctcg taccaacctg cactcagacc aaattctatt ctgccattgc ttattacatc
      421 taaagtagag accattttag ctgtgacaga tggaattcta tgtatgttta ccaaaatagc
      481 accaagcctt atccttttag ttaatgtagc tagtgaagat aatgtagtcc agcattcaag
      541 aatggggtct tctgagtttg gtttctcatc ttccttatcg gaaaaataag cattaagcca
      601 agagaatgta aaattgtcct taagccatac cgaatcaaat cctaaccttt cacattctaa
      661 tacgatgtgt cgaatatcct tatactccag tccttgttgg taaatataat atgcaaattt
      721 tatttcattt ttatttgtca caaatatgac cttgaattat tacgatagtc tgcgtattat
      781 atgaaatgtt ctatgtagag attggtttat ctgtctattc aattactatt taggtgattg
      841 ttgatagaat actttttctg gcttaaatat atgtatatta actccaatat aatataggct
      901 cggagggctt cgagtatgac atgtaattgg gatcggtaaa ctcttatcta ttaatttggt
      961 aacttattta aatattgaag taatttctaa taggttctaa aaaacgaaaa aggggaatca
     1021 gtgggatttg aacccttcta taaaatggga ccagttaaca aattaagttt atgttctgaa
     1081 aatactatcc ttttttcctt taatacctga agttatatta tttgaatagt atatgaacat
     1141 ctataacaat tataaagata attgtatcct aataatttta ctattctttt acacaaattt
     1201 aaataactac aaagaattat gtacaagaat attgttgaag aatctattgt atttttccaa
     1261 catcaatcca ataatcaata tcaaagctta aatattaaat taaaataata taaatagttc
     1321 taacatatgt attagctgga taataatata tatttataaa agttctgtat ctaataataa
     1381 aaaataataa aaagcatttg ttaatgttaa tgatagaatg aaatggatat cgataataat
     1441 aatacttctt tcagtatttt cattttctat ctttacaaac gacttaataa tgcaaaacaa
     1501 tataatatat gcacaagttg aacctccact accatcatca ccatcactac catcatcacc
     1561 atcatcacaa tcatctgacc ctttaacaac agctcaatct atactgaaaa cactggatga
     1621 aaatgcagtt aaagcattgg agaaaacgaa tacgatagaa cctccactac catcatcacc
     1681 atcatctgag gctttaacaa cacctcaatc tatactgaaa acactggttg atgatgcagg
     1741 tgaagcattg aagaaaacga atacgacaaa aacgctttta aatttaaata tagtcttaca
     1801 agcactaaaa gagtctaatg aaaattcatc atcaatagaa gcaaccaaac tacttctaaa
     1861 tgatgccatt caagcattaa acaataatga tacaactaga gcatctgcat atatgggtct
     1921 agcaagtcag caactaggag tcgaaccatc caaagttgat acacaatcta ctacttcaaa
     1981 tacaaatacc atagctagca aaaattatct attatatgaa aatcctacag ttggaataaa
     2041 aatcaagtat ccagataact ggtcattaag aacatactca tataaccctg ttttaaataa
     2101 tacagtagca gggttctatt ctccttcaaa aacagcatca gaaataggca atatatctgg
     2161 agtaactggt ctttttgttc cttatgtaga tatatttgta ttttcctcta aaaatatgtc
     2221 acttgatgaa ataattgata gcagaattga tagaattcaa aatagtacat attctttgat
     2281 tgatgaatct aaaccattta cacttaaagg aaaccagcca gcgtatattc taatatattc
     2341 tataaattct ggaaaagatg aactattcaa gaaaatgcaa gtttatacaa tttatagtaa
     2401 taaagtctat ttaattacat ttacgtcaca agaagcattg tttgctgaat ataggcctac
     2461 aatcgaggaa atggtaaatt cctttgaact actgaaaaga actagtttac aataaaaaag
     2521 tcaaatatca aacaacaata aatatgataa ctccatgtta ttcatacttt attatctttt
     2581 gaatttttct ttacaaataa ttctctttaa attttaaatt actttggagg tttaatctct
     2641 ggttcgctag ggaaatcaac acctatattg tttaaaattt tgcattgtcc tgctacagta
     2701 tccccattct ctgggttata gtcaagaact attccctttc caattccaca atcaaatgta
     2761 ttcatacctg ctccaccata cattattgtt gtgccagctc cacccataag cacatcatta
     2821 ccatcgcctc ctactaaaag attattccct ggaccagcaa ttagtatgtc attctcaggt
     2881 ccgccatcaa gtaaattact tccaactcca gacgtgacta tatcgtctcc ttttccaccg
     2941 tatagtctat cgtctccaat accgccatat ataatgtcat ttccatcttt ggcatatacc
     3001 tgatctatac cacctagact atagattagc tcattttttc tgcttccatc tattacatcg
     3061 tcacaactag tccctattat caaattacca tctattgtta tatctgatgt gccacctgtc
     3121 agtgcactag caatacaccc ggattctcta agagaaccaa tagctcttga ttctaaaaac
     3181 tgacgaatca tatcaataaa ctgacggata atatcaatga ggacacctag attcaattgt
     3241 agaccttctg caatatctaa taactgttct ttaggaatgg aagaagatcc aggttcatct
     3301 attaagtctg gattcaattg tagatctgca ggaatatcta ataactgttc ttcagaagtg
     3361 gaagaagatc caggttcatc tattaagtct ggattcaatt gtagactttc tataatatct
     3421 aataactgtt ctttaggaat ggaagaagat ccaggttcag caaataattt atcaaaatga
     3481 tatacaattg aatataaaga gaatacaatt agtaatccaa taaaagaact agttgtaaat
     3541 ggaaataagg tcaatacaaa aaaatatcaa tacattagtt ttaagaaata ggataaatat
     3601 attggagaaa tattataagt tttattttat actgttatat tatgaaacta atattcttaa
     3661 aatcttttgt ataaattaac tttaaaattc ataacttgct ctaggtttta ttttataatt
     3721 attaatacaa tattgattta cagtcaagtt tataaataat ttgacattat tttagctatt
     3781 aagataaatt aaatttatat atttatttac aaatctggat aattgtgttt taatttccta
     3841 ttagctaatg aatggacatg aatgacctca atgttaatgt ataaatcggc tctgttaatt
     3901 taagatatat tcacctcctc taactcaaaa taattattat tatttgctat tgtatcatta
     3961 tacatagata caaaaaattg tatccaattt tgtacatgta atagattgca ttcatctttt
     4021 tgcat
//
LOCUS       DATIAS010000524         2853 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_913501, whole genome shotgun sequence.
ACCESSION   DATIAS010000524 DATIAS010000000
VERSION     DATIAS010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2853
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913501"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1881)
                     /locus_tag="VLA74_10510"
     CDS             complement(<1..1881)
                     /locus_tag="VLA74_10510"
                     /inference="COORDINATES: protein motif:HMM:NF017262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HSF51180.1"
                     /translation="MIIIGDILILLSIGATVLIQSYAIGGSVGDVLTTEFGKIIIVRL
                     SLTLILLGFLLFCYKKFTRARREINEVSYFITIVGLGLSILFTNSLISHSAALNNFGP
                     ILIDYFHGIAASFWIGGLIFLTFVFLSKIFLIKDEELKAKIISTVIPQFSIIVIPVLA
                     SISITGPTLLWSLESNLSTTIAALYGKMLIIKLIIAGIMIIIGGYHQFITEKRLSTLS
                     IRNIDEKGHSKETIANEPKIFKKLMWSLRIETILGISLLFVVSILANMVLPSGEIPST
                     NITNYTETFNPQNQMKNNNIYSTVVYTEDQKIEINLQPARLGQNKIFVYFTHYNNKPV
                     DNISNVTLKLSQLERNIGPIQIDMEKISNGRFNAVIPISTLGLWNLEIQGTTLQPNTP
                     NTIANLQVNIKPRITDLQFNITEYKTPESSLLLYPVYQASTNSIWVGDSQPGSGRLWE
                     FNIENQSYKEHKISGINLITLSVFDSINRNILWFIDPTSSILGKYNTNTNETETFELP
                     SKGVISGLTIDNNENIWMTVIQDNSILKYDINQNEFESFRIPTENSRPLGIIYEENNN
                     YIWFAESVGKIGRLDIKSKNITEYPNVSESNTVDNNILAEPTALLSDPQTFNIYISDH
                     EKN"
     gene            complement(1894..2433)
                     /locus_tag="VLA74_10515"
     CDS             complement(1894..2433)
                     /locus_tag="VLA74_10515"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HSF51181.1"
                     /translation="MSYFPTLVYAHPVVIDSNPKQFQSLESAPDKVIVYYSEPIVLQY
                     SQISVIDSEGNRVENGNAENYNGDSSTISVPLKSDLSEGTFTINTKVLSAVDGHVVDE
                     SLVFSIGEGKGDFTQVESGSKDIFNLLSIENSLSRIPGYVGQIVIVGAAFIFLWIQKP
                     LSKFELIKNFLQPNLYLIK"
BASE COUNT          983 a          407 c          371 g         1092 t
ORIGIN      
        1 attcttttca tggtcactaa tgtatatgtt aaaagtttgt ggatctgata gtagtgcagt
       61 tggctcagct aaaatattat tatctacagt attagattca gagacattag gatattcagt
      121 aatattctta gacttaatat ctagacgtcc tatttttcct accgattctg caaaccaaat
      181 ataattatta ttttcttcat aaataattcc taaaggtcgt gaattttctg taggaatcct
      241 aaatgattca aattcatttt gatttatatc gtattttaga atagaattat cttgaattac
      301 agtcatccat atattttcat tattatctat tgttaaacct gatattactc ctttacttgg
      361 caattcaaat gtttcagttt cattagtatt agtgttatat ttacctaata tactagaagt
      421 tggatcaata aaccataaaa tgtttctatt gatagagtca aaaacagata aggtaatcag
      481 attaatacca ctaattttat gttctttgta gctttgattt tcaatattaa attcccataa
      541 tcttccactt ccaggttgag aatcacctac ccatatagaa ttagtacttg cttgatatac
      601 aggatataat aataggctac tttcaggagt tttatattct gtaatattaa attgtaaatc
      661 ggtgatccta ggttttatat tgacctgcaa attggcaata gtatttggag tattaggttg
      721 taatgtcgtt ccctgaatct ctagattcca taatcccaat gtactgattg gaattactgc
      781 attgaatctt ccgttagaga ttttttccat atctatttgt attggtccaa tatttcgttc
      841 taattgtgat aattttagtg taacattact tatgttatct actggtttat tattgtaatg
      901 ggtaaaatag acaaaaattt tattctgtcc taatcttgca ggttgtagat taatttctat
      961 tttttgatct tctgtataaa caactgtaga ataaatattg ttatttttca tttggttttg
     1021 tgggttaaaa gtttctgtat aattggtaat atttgtagaa ggtatttctc ctgaaggtaa
     1081 taccatatta gctaatatcg aaactacaaa caaaagggat atccctaaaa ttgtctcaat
     1141 tcttaaactc cacattaatt ttttaaaaat ttttggttca tttgcaattg tttctttgct
     1201 atgacctttt tcatcaatat tccttatgga taaagttgaa agtctttttt cagttataaa
     1261 ttgatgatat cctcctatta ttatcatgat accagcaatt attaatttga taatcaacat
     1321 tttaccatat agagcggcaa tggttgttga tagattactt tctaaagacc acaacaaggt
     1381 tggtccagtt atagaaatac tagctagaac tggtattact ataattgaaa attgagggat
     1441 tactgttgaa ataatttttg cttttaattc ttcatctttt attaaaaata ttttagaaag
     1501 aaaaacaaat gtcaaaaata ttaaacctcc aatccaaaat gatgcagcta tgccatggaa
     1561 ataatctatt aaaatagggc caaaattatt caatgctgca gaatgagaaa tcaaactatt
     1621 cgtaaataat atactcaatc ctagacctac tattgtaata aaatagctaa cttcattgat
     1681 ctctcttctg gctctagtaa attttttata acaaaacagt aaaaatccta atagtatcaa
     1741 agtcagactt aatcttacaa tgataatctt accaaattca gtagttaaaa catctccaac
     1801 tgatcctcct atagcataag attggattaa tactgttgca ccaatagaaa gaaggattag
     1861 gatatcacca ataattatca attttagtgc attctattta attagataca aatttggttg
     1921 aagaaaattt tttatcaatt caaattttga tagaggtttt tgaatccata agaatatgaa
     1981 tgctgctcca actataacta tctgaccgac atatccaggt attctactaa gagaattttc
     2041 tattgataat aagttaaata tatctttgga gccagactct acttgagtaa aatcgccttt
     2101 tccttcacca atactaaaaa ctagagactc atcaactaca tgtccatcga cagcagaaag
     2161 tactttggta ttaatagtaa aagttccctc acttaaatca ctttttaatg gaacagaaat
     2221 ggtagaagaa tctccattat aattttctgc atttccattt tctactctat ttccttcaga
     2281 atcaataaca gaaatctgac tatattgtaa aactatgggt tcgctataat aaactataac
     2341 tttgtctggt gcagactcta aagattgaaa ttgcttagga tttgaatcaa ttactactgg
     2401 atgagcataa actagagttg gaaaataact caaattatat aacaaaaaag aaattattaa
     2461 accagcaaat atgaaaattt taatgaattc cctcattggt gagtactgct atatttttat
     2521 aaacttgaag aattaatttg ttttcttgaa attctattat tagtataatt tatccatttt
     2581 tagatattct tatttataat gttattaagt acattttact tacttttagg ttaacattat
     2641 catagcaaaa atatatttac agataaaata tatatttttg atatattaaa tgacatattt
     2701 gaataaattt tcctctactt taataagttt aggttttcta acaggaatac tattttttgt
     2761 ttctctttct actattgatg ataatgtagt atatgcacat attttttcag gtactcctaa
     2821 ttctatattt aaagaaaaag atggatacaa tat
//
LOCUS       DATIAS010000525         2411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2003554, whole genome shotgun sequence.
ACCESSION   DATIAS010000525 DATIAS010000000
VERSION     DATIAS010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2003554"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..572
                     /locus_tag="VLA74_10520"
     CDS             141..572
                     /locus_tag="VLA74_10520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51182.1"
                     /translation="MKDKTIFSILLIVTLAVLVAPISHIAFAQNTTNEIMEKNLGIKN
                     EAESLVENATSSAQQVESIITKGAQSAATGAAQQVESIITEGAENVTEGAEQAGQAIT
                     EGAEQAGQAITEGAENVTEGAQEKGKNILDQIFGGIGGLFK"
     gene            616..2214
                     /locus_tag="VLA74_10525"
     CDS             616..2214
                     /locus_tag="VLA74_10525"
                     /inference="COORDINATES: protein motif:HMM:TIGR03605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SagB/ThcOx family dehydrogenase"
                     /protein_id="HSF51183.1"
                     /translation="MNNKIGIAKEYHKITKHSPSSIYSNIHFLDWENKPLPFKFFNNL
                     DLLYLPSNFPLADNDVITCLQNEQNFSNMSSNELDLMRISQILFLSAGITRVQKINNS
                     IYYMRSASATGALYPIEIYLACTHIRDLEDGIYHFCPGDFTLTKLHSGDYRSTLYHAC
                     GNNEKIITSPITLIFTSISWRNSWKYQDRSYRHWFWDVGTIISNYLSLCNANSLLTEI
                     IVGFQDDLVNKIISLPARKEAAIVLSPLGVGTIGEKEISNKHIDNLDVEFDTIPISRY
                     GEPNFPQIWKVHEGSYLEYENDVKKWVEILKTVRYSKKPDKISLERENLERGTPLYKV
                     ILQRGSTRKFSQKPITQSQLEKILYLANKNIPFDFIQYDDSLIDIYLIVNAVEGLKSG
                     SYFYDKINNTLNELETGDFRKASEHLCLDQKLFFDASSVCFILADVNKILKKLGNRGY
                     RAVQLEGGIRLGKIYLAAYAQGLGASGSTFYDDEVTNFFLPHSINRNPILAAGIGTPN
                     YVSKSGKIHVRNIDREDILKNLVY"
BASE COUNT          908 a          335 c          397 g          771 t
ORIGIN      
        1 taactatatg aaaaaagaca ataatacagc tcactaaata cattgattat agccgttcgt
       61 gtttttaatt tcatataaca aagcaaagtt gtatttagcg ctggaaagag ataaataata
      121 ttatttattg tatttttttt atgaaagata aaactatatt ttcaatactt ttgatcgtaa
      181 ctcttgcggt attggtagca ccaatttctc atatagcttt tgcgcaaaac accactaatg
      241 aaataatgga gaaaaattta ggaataaaga atgaagctga aagtttagta gaaaatgcaa
      301 cgtcatcagc tcaacaggta gaaagcataa ttactaaggg ggctcaatct gctgcgacag
      361 gagcagctca acaggtagaa agcataatta ccgaaggagc agagaatgtt actgaaggag
      421 ctgaacaagc aggtcaagca attaccgaag gagctgaaca agcaggtcaa gcaattaccg
      481 aaggagcaga gaatgttact gaaggagctc aagaaaaagg aaagaacatc ttagatcaaa
      541 tatttggtgg aattggtgga ttattcaaat aaaataattt ttaaaaaatt attttaaatt
      601 ttaattatat ttcctttgaa taataaaata ggtattgcaa aagaatatca taaaattacg
      661 aaacattctc catcttctat atattcaaac attcattttt tggactggga gaataaacct
      721 ttacccttta aattttttaa taatttagat ttattatatt taccatccaa ttttcctctt
      781 gcggataatg acgttattac atgtttacaa aacgaacaaa atttttctaa tatgtcctct
      841 aatgaactag atttaatgag aatttcgcaa attttattcc tttcagcagg aattacgcgg
      901 gtacagaaaa ttaataattc aatctattac atgagatctg catcagctac aggggcttta
      961 tatccaattg aaatttattt agcatgtacg catatacgtg acctagaaga tggaatatat
     1021 catttttgtc ctggagattt tacattaacc aaattacata gcggtgatta tagatctact
     1081 ctgtatcatg cttgtggaaa caatgaaaaa ataattacct ctccaataac tctaatattt
     1141 acttctattt cttggagaaa ttcatggaaa taccaagaca gatcatatcg tcattggttc
     1201 tgggatgtcg gaacaataat atccaattac ttatctctat gtaatgcaaa ttctttatta
     1261 actgagatca tcgtgggttt tcaagatgat ctagtcaaca aaataatttc actaccagct
     1321 agaaaagagg cagcaattgt attatctcca ttaggtgtag gtacaatagg cgaaaaagaa
     1381 atctctaaca aacatataga taatctagat gtagaatttg ataccattcc aatttctaga
     1441 tatggagaac ctaactttcc acaaatatgg aaggtacacg aaggttcata tttagaatat
     1501 gaaaatgatg taaaaaaatg ggttgaaatt ttaaaaacag taagatattc taagaaacct
     1561 gataaaatta gtcttgaaag agaaaatctt gaaagaggaa ctccgttata taaggtgatt
     1621 ttgcaaagag gttcaactag aaaattttct cagaaaccaa taacacaatc acaactagaa
     1681 aaaatcctat accttgcaaa taaaaatatt ccatttgatt ttattcaata tgatgatagt
     1741 ttgatagata tttatctaat tgttaatgct gtcgaaggcc ttaaatcggg tagttatttc
     1801 tacgataaaa ttaataatac ccttaatgaa cttgaaactg gtgattttag aaaagcttct
     1861 gaacatctat gtttagatca aaaacttttc tttgatgcga gtagtgtgtg tttcattttg
     1921 gctgatgtaa ataaaatatt gaaaaagtta ggtaatagag gatatagagc tgtacaattg
     1981 gaaggtggaa taagattagg aaagatatat cttgctgctt atgcacaagg attgggtgca
     2041 tctggttcta ctttttatga tgatgaagta acaaactttt ttctgccaca ttcaataaat
     2101 agaaatccta ttttagctgc tggaatagga acaccaaatt atgtttctaa atcaggaaaa
     2161 attcatgtta gaaatattga ccgagaagac attcttaaga atctagttta ttgatatttg
     2221 aatataaaag taaattccat tctaaaaaat tttagaacac aagatactaa atgccggatc
     2281 tttaaatcag taagcaatat tattggatgg caggaaagtt gtgagctact aatcgtctat
     2341 gataagcatt gacgataagc agagctccgt attaaaaccc atactttata ttgtataaaa
     2401 ttaaaaattt t
//
LOCUS       DATIAS010000526         2153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_369114, whole genome shotgun sequence.
ACCESSION   DATIAS010000526 DATIAS010000000
VERSION     DATIAS010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369114"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VLA74_10530"
     CDS             <1..228
                     /locus_tag="VLA74_10530"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF51184.1"
                     /translation="KRISIQKRRMDYKTGRRSDCQKKSGGGIRYHYTHIYRLMHKWGF
                     KQKVPRKVHVNTASREEKERFKKEQERYWII"
     gene            300..752
                     /locus_tag="VLA74_10535"
     CDS             300..752
                     /locus_tag="VLA74_10535"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51185.1"
                     /translation="MRKDERPVVRITGSHQESVLFGSTSLEGKQLFRQYDWFDENTFL
                     DYLKQIHRKFPKCYLFLDKAKQHYRSKRVLEYFDKHKEDLIPVYLPTASPVEFMVLEE
                     IWNIAKNDLLVLQYYSSFADFKNKIYTYFRTKRFNLNMRNYLLAKIDN"
     gene            complement(749..1948)
                     /locus_tag="VLA74_10540"
     CDS             complement(749..1948)
                     /locus_tag="VLA74_10540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51186.1"
                     /translation="MDNDLINISPYQMFLLHIRSPKTKDQYIQKFEHFFKFLSQQLEE
                     KKFETEDIEKKYFLLYDKAKSEHWLFNCILKYVHFINKRVETENLSGATFYNYFKNIK
                     KFCLANDIEVKWHKLFLSAPKKRRAAIDRPPSVPEIKTILEYPDRRIKFIVLTMCSSG
                     MRIEGWNYLRWRNIKPIQRNGQIIGAKIIIYEGDVEEYYSFITAETYFYIKDWMDYRK
                     EAGESINGDSWIARDIWNFSVRGSRVCGFATNPNKLSIKAIKSLINRALWAQGLRTKL
                     PEGKRRHEFQEAHGFRKFFETQFTIAGLKREIINKLMNHSNGVLDSYIKPSEDMLLNE
                     YLKAIDYLTINENFRLKKEVNELKNKTKNNEYVITAKLQEKDEQIKTLMERQEKFEQL
                     YQLAYVF"
BASE COUNT          720 a          345 c          321 g          767 t
ORIGIN      
        1 aaacgaatta gcatccagaa aagaaggatg gactacaaaa caggtagaag atctgattgt
       61 cagaaaaaga gtggtggtgg aataagatat cattatactc acatttacag actcatgcac
      121 aagtggggat tcaaacagaa ggtaccaaga aaagtacatg taaatactgc atcaagagaa
      181 gagaaagaac gttttaaaaa agagcaagaa agatactgga taatataaaa gatgaattta
      241 ctgctgtatc attagatgaa tcattcttct tctatgactc acttgtacgg aaagtataga
      301 taagaaaaga cgaaagacca gtggtaagaa tcactggatc tcatcaagaa tcagtcctct
      361 ttggttctac cagtctggaa gggaaacaat tgtttagaca gtatgactgg tttgatgaaa
      421 atacctttct ggattatcta aaacagatac acagaaaatt tccaaaatgt tacctgtttc
      481 tagataaggc aaaacaacat tatagatcaa aaagagtact ggaatatttt gataaacaca
      541 aagaggatct gattcctgta tatcttccaa ctgcatctcc agtagaattc atggtactgg
      601 aagaaatatg gaatatagcc aagaacgatc ttcttgttct acagtattat tcatcatttg
      661 cagattttaa aaataaaata tatacatatt ttagaacaaa aagattcaac ctgaatatga
      721 gaaactattt gcttgctaaa attgataatt agaaaacata agctagttgg tataactgct
      781 caaatttttc ttgtctttcc attaatgttt taatttgttc atctttttct tgtagtttcg
      841 ctgtgattac gtattcatta tttttggttt tattttttaa ttcattgact tcttttttta
      901 atctaaaatt ttcattgatt gttaaataat caattgcttt cagatattca tttaacagca
      961 tatcctctga cggtttaatg taactgtcta acaccccatt agaatggttc ataagtttat
     1021 ttattatctc tcgttttaat cctgctatag taaattgggt ttcaaaaaat ttacgaaagc
     1081 catgtgcttc ttggaattca tgtctacgtt ttccttctgg aagttttgtt cttaatcctt
     1141 gcgcccataa agctcgattt attaatgatt ttatggcttt aattgaaagc ttatttggat
     1201 tagtagcaaa tccacatact ctacttcctc ggactgaaaa attccatata tctcttgcaa
     1261 tccagctatc tccatttatg gattctcctg cttcctttct ataatccatc caatctttta
     1321 tatagaaata tgtttcagct gtgataaagc tatagtattc ttctacatct ccttcatata
     1381 tgattatttt tgcaccaata atttgcccat ttctctgaat aggttttata tttctccatc
     1441 taagataatt ccatccttcg atacgcatac cagacgaaca catagttaag acaatgaatt
     1501 taatacgtcg atctggatac tctaaaattg tctttatttc tggcactgag ggtggtcggt
     1561 caattgctgc tctccgtttt tttggagcac tcaaaaataa cttgtgccat tttacttcaa
     1621 tatcattagc tagacagaat tttttaatat tcttaaaata attataaaag gtagcaccac
     1681 taagattttc agtttctact ctcttgttaa taaaatggac atattttaaa atacaattga
     1741 aaagccaatg ttcacttttt gctttatcat ataaaagaaa atattttttc tcaatatctt
     1801 cagtttcaaa tttcttttct tcaagctgtt gagagagaaa tttaaagaaa tgttcaaatt
     1861 tttggatata ttgatctttt gttttaggtg atctaatatg taacaaaaac atttgatatg
     1921 ggctaatatt gattagatca ttgtccattt ctatgctctc tcctaatatt agaagtagaa
     1981 accatataaa gcgtcgctaa aggtgttaag cgcccgggcc gggattagta tcctcggttc
     2041 gaatcctctt ttttatagga ttcatgaatg actttaacat aaactaagaa ataaccttta
     2101 ctttttataa tcatttaatt atgaattaat taaccagcca agaaaattga aat
//
LOCUS       DATIAS010000527         2835 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1050137, whole genome shotgun sequence.
ACCESSION   DATIAS010000527 DATIAS010000000
VERSION     DATIAS010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2835
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050137"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VLA74_10545"
     CDS             complement(<1..401)
                     /locus_tag="VLA74_10545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51187.1"
                     /translation="MDPENGNELEAKEIILGELENVRDNPSKVRQDGCAACHVLFTLI
                     DKMQISESRASDLLSQILFHDQQLNDSFIEMVENIHMKRRNMAIPFALKNRDAKDRHI
                     ESNFKNFLEEISYDFINYGHDLVLRKLMISA"
     gene            673..867
                     /locus_tag="VLA74_10550"
     CDS             673..867
                     /locus_tag="VLA74_10550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51188.1"
                     /translation="MANTYEEIDSLGQLVVSLTKKILETNCKVLDLEKWVSEQEKQVL
                     EVETNRNIQDLEKRIIEFKR"
     gene            1065..1676
                     /locus_tag="VLA74_10555"
     CDS             1065..1676
                     /locus_tag="VLA74_10555"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF51189.1"
                     /translation="MPNRNRNRREEKVNHILQASLKVLATKGYENATIADISNAAHVS
                     RGILHYYFTDKEDLVSKALAKSSSSLIQSSLVGIKGNSAEEVVDEILNRYLVNLQQHP
                     EFYAFLFEMWCASRRSKKIKSELEGCIEKVVISIEKLLENIGNNSSMLISSHDESKEI
                     AKALLALSDGIAFHLLINHSENLKNKKFWLLIKNMMLAVLKRR"
     gene            2618..2803
                     /locus_tag="VLA74_10560"
     CDS             2618..2803
                     /locus_tag="VLA74_10560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51190.1"
                     /translation="MAVAEDPEEGGYIVKSNTNQNRTYNVYFSIRKQRYLCTCKWFAI
                     KQTECSHIRKVKERITQ"
BASE COUNT         1007 a          398 c          500 g          930 t
ORIGIN      
        1 atcgcagaaa tcatcagttt gcgaagaaca agatcatgtc catagtttat gaaatcgtat
       61 gatatctctt ctagaaagtt cttaaagttt gattcaatat gacggtcttt tgcatcacga
      121 ttttttaatg caaatgggat agccatattc cttcgtttca tatgaatatt ttctaccatt
      181 tctataaagg aatcatttaa ttgttggtca tgaaaaagga tctgggataa cagatcggaa
      241 gcgcgtgatt cacttatttg catcttatca attaaagtga ataaaacatg acatgcggca
      301 caaccatctt gtctaacttt ggaaggatta tcacgtacat tttctaattc tcccagaatt
      361 atttctttag cctctagctc atttccattt tcggggtcca ttattactcg atcttctcat
      421 ccctattaat taatagatgg tacatagaaa tatattgtta agatcgccat ctttttgtgt
      481 tatgctgtaa tcgaaggata aaatagagga taaaatagag tgaagaaatt catgtattat
      541 gcaaagtcaa taagttccag ttttttgtta cttgatttat atcttcattc acatcgaaga
      601 tttagaacga caattctata atacgaaaaa aatatgacag ataaatattc tctataaact
      661 cactaattgt atatggctaa cacctatgaa gaaatagatt cattaggcca attagtagtt
      721 agtctaacta aaaaaattct agagacaaac tgtaaggtcc tggatctaga gaaatgggtc
      781 tcagaacaag agaaacaagt tctggaagta gagacaaatc gtaacatcca ggatctggag
      841 aaacgaatca tagaatttaa gaggtaacag cctgaacctg caaaagaaga cctagaattt
      901 aaagcatgat tatgtctctc ctttttttat tttttgcata tatcatcctt taatttttgg
      961 tttgacaggt gttatttctt gataatatac tgatatgttt ggttggttgt ccagtatatt
     1021 taatagagat ggttattatc catcataatt gaaagatgag agagatgcct aatcgcaatc
     1081 gtaatcgtag agaagaaaaa gtaaatcata ttttacaagc ttcattgaaa gtacttgcta
     1141 ctaaaggtta tgaaaatgct actatagctg atatatctaa tgctgctcat gttagcagag
     1201 ggattttaca ttattatttt acagataagg aagatctagt aagtaaggca ttagcaaaga
     1261 gttctagcag ccttatacaa tcttctttgg tgggaatcaa aggaaattct gcagaagaag
     1321 tagtagatga gatattgaat agatacctag tgaatttaca acaacatcct gaattttacg
     1381 cttttctatt tgaaatgtgg tgtgccagta ggcgcagtaa aaagataaaa agtgaattag
     1441 agggctgtat tgagaaagta gtaatctcta ttgaaaaatt gttagagaat atagggaata
     1501 atagtagtat gttaatctct agtcatgatg aatctaaaga gatagcaaaa gctcttcttg
     1561 cattatctga tggtattgct ttccatcttc tgataaatca ttccgagaat ttgaagaata
     1621 aaaaattttg gttgctgata aaaaatatga tgttagctgt tttgaagaga cgatgatgta
     1681 aacctcatat acgttttgca tagaagacca ctaatgagag atataacgat ccaacagtac
     1741 aatcatacta aattgaatga ccatcgattc tgctaagaga tatataaaat acacttaaaa
     1801 cagataaaag tataatatgg atattgaaaa aagaactgct taaatttacg ttggctcttt
     1861 ctgggttttt cgccctaatt ggagtcggat atttactaca tcaatacttt cgctttggat
     1921 cttgaaatga aaaaaacagc attaagatgc gctgggatgt ccttggatgg gacatcgaac
     1981 aacatcctga tactgtacca tccaaatcaa attattctaa ctaatgttat ttgacaatga
     2041 attctagcaa attaagatca tggggtacgt gtgttgaata agctgtgccc gtttgctcaa
     2101 gtaaagttca ctatttaatt tgactttatc catattatag gttctgtttt agggtaaaaa
     2161 caatatctat aattattttg aagaatttga acaaaatcaa atttatcaag ggaaaagagg
     2221 gaggaaagat attaatgcaa taaattatag tccagcagac tgttactcca ttcgtcgtac
     2281 tctaattgat gtatttgatt attacagact gaataatact taatgtcagt atcacatatg
     2341 gtataatgta cacggatcat atatttacta tatagcgtac taaaatggat tcaagattca
     2401 cgcggttcaa atcttcatat ttgagattag ttaaatagaa tctaaaattg gacatcaatt
     2461 tttatcaagt acaaagaata aaacaacgtt ccagatatct ttagatttca aatgctggta
     2521 ttattgctaa atcgttaaat gtattgttaa acgttaaata tttaaatagc tttatatgta
     2581 aaaatgatgt cgttttagtg ggatagtgaa ataactggtg gctgtggcag aagacccaga
     2641 ggaaggaggc tatattgtca agtcaaatac aaaccaaaac cgaacatata atgtctattt
     2701 tagcattaga aagcaacgat atctttgtac atgtaaatgg tttgcgatta agcaaacgga
     2761 atgttcacat attagaaagg taaaagaaag aattacccaa taatatctgt tctctagagt
     2821 ttagaatttg aaatt
//
LOCUS       DATIAS010000528         2054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1458872, whole genome shotgun sequence.
ACCESSION   DATIAS010000528 DATIAS010000000
VERSION     DATIAS010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458872"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..315
                     /locus_tag="VLA74_10565"
     CDS             163..315
                     /locus_tag="VLA74_10565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51191.1"
                     /translation="MRKKDVQPFLTVEDFWGGLLLGFFVGYIGKSFIDRFFGFNDNNN
                     SLPVSG"
     gene            495..>2054
                     /locus_tag="VLA74_10570"
     CDS             495..>2054
                     /locus_tag="VLA74_10570"
                     /inference="COORDINATES: protein motif:HMM:NF019313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase fold protein"
                     /protein_id="HSF51192.1"
                     /translation="MFSIESVKLWFKTRRKNTANQQNRNDVIYNKPLNDISSNLKTAC
                     PKIITDEPSLNYDAFDFKTYSEKLVHIILNSKPRFAIGIFGGWGTGKTTLMKMIEAKL
                     NGYVFCWENIPTSEKDNHNLKKYIKKNFSNVDWIEQKEFIKSPDNKKISIYNNKDSIS
                     ISLNENTNTVSLTINNEILNKELIVKKENNRSNIYEKQNDILTVWFDAWKYEKEKHLA
                     ILPFIRTIQIELEHKLANESTATNDYTITQLHKKWAKVRKGLEKTFNAFLESTNLNFE
                     LGKFVSTDTKLSTFKDVLKSESSPFEIDGERIFYYHKHISEHLIDAINNLRNTKLGGN
                     PNNRIVVFIDDLDRCSPDKAIEVLESLKTFFDIEGFVYVIGMDSKSINAIVRKKYGND
                     SHIEGLEYMEKIVQLPFRIPTWKRGWTEEAISKSIIQIVSTELNDSELISEFDKNKEL
                     IAKAIQSNPRQLKRFINNVIFTKTVFNDRDIDKLIVVQALDFHQEWSNFLDLITPNQK
                     RKAFFEHYIKLK"
BASE COUNT          817 a          270 c          310 g          657 t
ORIGIN      
        1 tagatggtaa tacaaccagt aaccatcttt tctcttgtgt ttgatactca caagggaaca
       61 tacatactat ttctaagcta aaacaaaaat catgaaattc tatttaccga ttgttaaact
      121 gaattaggca acaaccccgc atttatcata ggagtaatat taatgagaaa aaaagatgtg
      181 caaccattct taacagtaga agatttttgg ggaggattat tattgggatt ctttgtagga
      241 tatattggga aatcgtttat tgacagattc tttggattta atgataacaa taattcgtta
      301 cccgtttctg gctaatctat ttaaatcaat tttttattat ttattgtatt aaggttaact
      361 ctgaactaca aaattgtgtc aaaatcagtt cacacacctc cgtttgcaat caccttttat
      421 tcatctactt ttactaaact aatttaggcg ccgaaaaatt attaattcta tttatattgt
      481 ctaattatta ctaaatgttt tctattgaat cagttaagtt atggtttaaa actagaagaa
      541 aaaatacagc caatcagcag aaccgtaatg atgttatata taataaaccc ctaaatgata
      601 tatcttcaaa tttaaaaact gcttgcccta aaataattac tgatgagcca tcactaaatt
      661 atgatgcttt tgattttaaa acatacagtg agaaactagt acatattata cttaactcta
      721 aaccaaggtt tgctattggg atatttggag gatggggaac tggaaaaaca actttaatga
      781 aaatgatcga ggcgaaactc aatggatatg tattctgttg ggaaaatatt cctacaagtg
      841 aaaaagataa tcataatctt aaaaaataca ttaagaagaa ttttagtaat gtagattgga
      901 tagaacaaaa agaatttata aaaagccctg ataataaaaa aataagtata tacaataata
      961 aagattctat ttctatttca ttaaatgaaa atactaacac tgtctcatta acaatcaaca
     1021 atgaaatttt aaataaagaa ttaattgtca aaaaggaaaa taatagatca aacatatatg
     1081 aaaaacaaaa tgatattcta actgtatggt ttgatgcttg gaaatatgaa aaagaaaagc
     1141 acttagctat tttgccattt ataagaacta ttcaaataga attagaacat aagttagcaa
     1201 atgaatcaac agcgacaaat gattatacta ttacacaatt acataaaaaa tgggcaaaag
     1261 tccgaaaagg acttgaaaag acatttaatg cctttttaga gtcaactaat ttaaattttg
     1321 aattaggaaa atttgtctca actgatacaa aattgtctac atttaaagac gttttaaaat
     1381 ctgaatcttc tccgtttgaa attgatggtg aaagaatctt ctattaccat aaacatataa
     1441 gtgagcatct tattgatgct ataaacaatc ttagaaatac aaaattaggt ggaaatccta
     1501 ataatcgaat tgttgttttc attgatgatt tagacagatg ttctccagat aaagcgattg
     1561 aagttttaga atcactaaag acattctttg atatcgaagg ttttgtatat gttataggaa
     1621 tggattccaa aagcataaat gcaatagtta gaaaaaagta tggaaatgat tctcatattg
     1681 aagggttaga atatatggaa aagatcgttc aactaccatt tcggatccca acatggaaaa
     1741 gaggatggac agaagaagca atatctaaat ccataataca aatagtatca actgaactga
     1801 atgattcaga gcttattagt gaatttgata agaataaaga actaattgcg aaggcgatcc
     1861 aatcaaatcc aagacaacta aagaggttca ttaataatgt catttttaca aagactgtat
     1921 ttaacgatag agatattgat aaattaatag ttgttcaggc tttggatttt catcaggaat
     1981 ggagtaattt cttagattta ataaccccta accagaagag aaaagcattc tttgagcatt
     2041 acataaaatt gaag
//
LOCUS       DATIAS010000529         2444 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2004552, whole genome shotgun sequence.
ACCESSION   DATIAS010000529 DATIAS010000000
VERSION     DATIAS010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2004552"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..267
                     /locus_tag="VLA74_10575"
     CDS             127..267
                     /locus_tag="VLA74_10575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51193.1"
                     /translation="MNNDYNLMGLFSRFKKKKKDSQKREDNTTQGYDEHQKNSEKEPI
                     SN"
     gene            436..696
                     /locus_tag="VLA74_10580"
     CDS             436..696
                     /locus_tag="VLA74_10580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51194.1"
                     /translation="MKQYHKRFYFYGKTVPELLDKVNEFTKQYSVGNIFDVSIMEVLD
                     KEIEIEKNYGKGEVDNTSSDNRIKTITFEYSYYAIVLILIEE"
     gene            complement(1023..2093)
                     /locus_tag="VLA74_10585"
     CDS             complement(1023..2093)
                     /locus_tag="VLA74_10585"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51195.1"
                     /translation="MKIKCALYFSAIMTIVITFSISISLFLNNNTPLVYGVESNYSTV
                     ENNTRIFLEKLQQSGGPPLYTLTPSEARNVLSGLQAGPIEKLPAEIENKTIPGGPNGE
                     ISIQIVKPQGSGNETLPVVMYFHGGGWVLGGFDTHERLLRELANGAHAAIVFVNYTLS
                     PEAKYPINLEEAYTATKWIAENGQTLNLDSSRLVVAGDSVGGNMATAVTLLAKERGGP
                     PITFQLLFYPVTDANFNTSYNTYQEGYFLTREAMKRFWDNYLSNDTNRKEPTVSPLQA
                     SIEQLSKLPPALIIVGENDVLREEGEAYAHKLMQAGVPTTATRYLGTIHDFMMLNPIT
                     DTPAARGAIDQVSQTLKKVLSE"
BASE COUNT          866 a          371 c          393 g          814 t
ORIGIN      
        1 cctcttaaga agcatatcag caaataaggc tatggcagaa agagtaaatc tcttttactt
       61 catcgaaaaa atatgttctt ttattcattt tctttagttt tatctcctat agatgccttt
      121 atttatgtga ataatgatta caatcttatg ggcttatttt ctagatttaa aaaaaagaaa
      181 aaagatagtc aaaaaaggga agacaataca actcaaggct atgatgaaca ccaaaaaaac
      241 tcagaaaaag aaccaataag taactaaatt caattatttt ttcatttttg ctctctttat
      301 attaaaaata tgtcttattt gccataaact tataagtagg tactcaaaag gagtatgagt
      361 caactgtttt tgaaacaatc ttgtagttat atgataatat agaatatatc aaatagaaat
      421 ttatcttacg gtaagatgaa acaataccat aaaagatttt atttctatgg aaaaacagtt
      481 ccagaattac ttgataaagt aaatgagttt actaaacaat acagtgttgg aaatatcttt
      541 gatgtatcta taatggaagt attagacaaa gaaatagaaa tcgagaaaaa ttatggtaaa
      601 ggtgaagttg ataatacttc ttcggataat agaataaaaa ctattacttt tgaatattca
      661 tattatgcaa tagttctcat tttaatagaa gaataaatga aaaattttat gcatatgaat
      721 tattatattt tataatttaa aagttatata atgataatcc atttattagc caaaggttct
      781 gagggcttcg agtatgacat gtaatgtggg atcgcattat cattatttga atttaattta
      841 attgtccaat tatcaaatat ctacataagg tgcaactttt atagaacatg aatcaactaa
      901 ataaatatta aaaagaatct aaaaaagcaa taaattattt gttatctatt tctataatta
      961 ttacattatt catgaaaata atttgcaaca aatgttaaga attaaaataa atatggtatc
     1021 ttctactctg acaatacttt tttaagtgtc tgagagacct gatcaattgc acctcttgct
     1081 gcaggagtat cagttattgg gttcagcatc ataaagtcat ggatagtacc tagataacga
     1141 gttgcagtag ttggaacgcc agcctgcatc agtttatgag cataggcttc gccttcctca
     1201 cgtaatacgt cattctctcc gactattata agtgcaggcg gtaatttact aagctgttca
     1261 attgatgctt gcagtggaga aactgtgggc tcttttctat tagtatcgtt ggaaagataa
     1321 ttatcccaaa accgtttcat tgcctcacgg gtaagaaagt atccttcttg atatgtatta
     1381 taagaagtat taaagttggc atcagtaact ggataaaata gcaattggaa cgtgatagga
     1441 gggccgccac gttctttggc aagtagtgta actgcagtag ccatattgcc tcctacgcta
     1501 tcccctgcta ctactaaccg tgaagaatct aaattaagag tttggccatt ctcagcaatc
     1561 cattttgtcg cagtatatgc ttcttctaga tttattggat attttgcttc aggagacaga
     1621 gtataattga caaatacaat tgctgcatgt gcgccattag caagttccct taacaatctc
     1681 tcatgagtat caaaaccacc tagtacccat ccaccaccat ggaagtacat tacaacaggt
     1741 aaagtttcat tgccactacc ttggggtttg actatctgaa tagatatttc accattagga
     1801 cctcctggaa tagttttgtt ttctatttcg gctggaagtt tttctattgg gcctgcctga
     1861 agtccagaca gtacatttcg agcctcactg ggcgtcaaag tgtagagtgg aggaccgcca
     1921 ctttgttgta gcttctctaa aaatattcga gtattatttt ctacagttga atagttggat
     1981 tccacgccat atactaatgg agtattatta tttaaaaaga gtgaaatgct aatgctaaat
     2041 gttattacta tagtcataat tgctgaaaaa tacagagcac atttgatttt catctactta
     2101 taatatggat tttcctattt aagattttat aaaatcattg actctaaaaa ggattatagc
     2161 taacaacatt ctacaattaa ttattgaata aacagcaatc aaaatacatt aaatcaatca
     2221 gattattaag tattctcaaa cattgtggaa ttacactata ccttaatata aagagcaatg
     2281 aatcatacgg tataggaaca tatagtactt tttagaatac aaagacaaga gctacagatt
     2341 taatcgtgtt ataatatggg ttataactac atagtcccat tcaagagaag ggttcaataa
     2401 ctaaaaacta aatcttagag ggcttcgagt atgacatgta gttg
//
LOCUS       DATIAS010000530         2007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2004728, whole genome shotgun sequence.
ACCESSION   DATIAS010000530 DATIAS010000000
VERSION     DATIAS010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2004728"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /gene="pstA"
                     /locus_tag="VLA74_10590"
     CDS             <1..897
                     /gene="pstA"
                     /locus_tag="VLA74_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HSF51196.1"
                     /translation="YTKRRKNIQEMMSKTSNRKIYVNKLVTILTICCVIFAIIPLGSI
                     LFEVFKNGYSAISFEFLTQKPGSIGSTKGGIGPAIQGTLIVVGLGSLIAVPVGVLAGI
                     YLSEYAKSNSKFAFAVRFFNDVLTGLPSIIVGIVGYVLIVLSIGSFSVIAGAFSLCLI
                     MIPLVTRITEETLKIVPNSIREGAHSLGIPKWKITLFIVIRTAISGVLTGIVLSIARI
                     AGETAPLIMTILGTSLFFSSFTGPVDALPLRIWRLASQPYESAHANGWGAALILILII
                     LGLNISLRLIAQRNGMGSSKHT"
     gene            1020..>2007
                     /locus_tag="VLA74_10595"
     CDS             1020..>2007
                     /locus_tag="VLA74_10595"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate uptake regulator PhoU"
                     /protein_id="HSF51197.1"
                     /translation="MDGSEVRKIQFTGKSTYVLSLPKKWVSELNLKPGDPVTIIREPN
                     NTLSIISDITRSSIEAVDEATVQVLKDENANSLKRKIVSMYLAGYNIINLKSKLGRIN
                     PLQREAAREVVRRNLVGTEIIADSSDLITIQVLITLPELSVNTAVRRMFLLATSMHRD
                     AMTSLTELNYELANAIIKSDDEVDRFSLYILRNLVIATKNERILNDVGLKKTSDCLSY
                     RLAVKSIERIADHASKFAEKSLSIKEKIPNDILDGIRKMSELSLQDLNDSVEAFLRRD
                     YLMADKIVDRKENVQILENTIVSLLDSIDHGDFNQYKIFIKLILEDLRRTAEY"
BASE COUNT          716 a          278 c          331 g          682 t
ORIGIN      
        1 tataccaaaa gacgaaagaa tattcaagag atgatgtcaa aaacatctaa cagaaaaata
       61 tatgtaaata aattagtaac aattttaact atatgttgtg ttatttttgc aataattcct
      121 cttggtagta ttctttttga agtttttaaa aatggttatt ctgctattag ttttgaattt
      181 cttactcaaa aacctggttc aattgggtct actaagggag gtatcggtcc agctatccaa
      241 ggaactttaa tagtagtagg cttaggatct cttattgctg tacctgtagg tgtattggct
      301 ggaatttatc tatctgaata tgcaaaaagc aacagtaaat ttgcctttgc agtacggttc
      361 tttaacgatg tactaacagg attaccttca attatagttg gtattgtagg ttatgtatta
      421 atagtgcttt caattggttc tttttctgtt attgcaggag ctttttcatt atgtttaatt
      481 atgattccac ttgttactcg aataactgaa gaaaccctta aaattgtacc aaattctatt
      541 agagaaggag ctcactctct tggaattcct aaatggaaaa tcaccttatt tatagtaata
      601 aggactgcaa ttagtggagt cctgaccgga atagtattat caatagcaag aattgcggga
      661 gaaaccgctc cattaatcat gactattcta ggaaccagtt tatttttttc atcatttact
      721 ggacctgtag atgctcttcc actcagaata tggagattag cttctcaacc atatgaatct
      781 gctcatgcta atggatgggg agctgctttg atcttgattc ttattatttt aggactaaat
      841 attagtttaa gattaatagc gcaaagaaat ggaatgggat cttcaaaaca tacataatta
      901 ttcaactata ggaaataatt atctatatac ctcttctata tagaaataat atatctatat
      961 tataactaac cataaactat acatgtattg ttatttctaa ataactattg accgtatata
     1021 tggatggtag tgaagtaagg aaaatacagt ttacgggtaa atcaacatat gtattatcct
     1081 tacctaaaaa atgggtaagt gaattaaatc taaaaccagg cgatcctgta accattattc
     1141 gcgaacccaa taatacttta tctataatat ctgatattac aagatcctca attgaagccg
     1201 ttgatgaagc aacagtacaa gtattaaaag atgaaaatgc taattccctt aaacgaaaga
     1261 tagtttcaat gtatcttgct ggatacaata taataaatct taaatctaaa ttaggaagaa
     1321 ttaatcctct tcaacgtgaa gctgcacgag aggttgttcg tagaaatttg gtgggtacag
     1381 aaataattgc tgattcatct gatttaataa caattcaagt attgattaca cttccagaac
     1441 tttcagtaaa tactgcagtt agaaggatgt ttctccttgc tacttcaatg catagagatg
     1501 caatgacatc attaactgaa ttaaattatg aattagctaa tgctattatt aaatctgatg
     1561 atgaagttga ccgattcagt ctttatatct tgagaaatct tgtcatagca acaaaaaatg
     1621 aaagaatatt aaatgacgtt ggattaaaaa aaacttctga ttgtttaagt tatagattag
     1681 cagtaaaaag cattgaaaga attgcagatc atgcttctaa atttgcagaa aaaagtcttt
     1741 caattaaaga aaaaattccc aatgatattc tagacggtat taggaaaatg agtgaattgt
     1801 ctttacaaga tcttaatgat tcagttgaag catttttaag aagggattat ttaatggcag
     1861 ataaaatagt agatagaaaa gaaaatgtac aaattcttga aaatactatt gtgtctttat
     1921 tagatagtat tgatcatgga gactttaatc aatataaaat tttcataaaa cttatacttg
     1981 aagatctaag acgtactgca gagtatg
//
LOCUS       DATIAS010000531         6691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1593404, whole genome shotgun sequence.
ACCESSION   DATIAS010000531 DATIAS010000000
VERSION     DATIAS010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6691
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1593404"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..354)
                     /locus_tag="VLA74_10600"
     CDS             complement(85..354)
                     /locus_tag="VLA74_10600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51198.1"
                     /translation="MAEAIFRVQSHKFTQDNIQGTLVCSKCDEVFSKEFLLDLEGQTT
                     EFKCPVCGVTGEADLPFKTAEEREEFDEDLDEVEEENGDEFDEEY"
     gene            complement(479..1087)
                     /gene="folE"
                     /locus_tag="VLA74_10605"
     CDS             complement(479..1087)
                     /gene="folE"
                     /locus_tag="VLA74_10605"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HSF51199.1"
                     /translation="MSDKRIQKTGIQKTGFMNKNKIEKIIRQLLIELGENPNREGLIE
                     TPRRIAGMYEEIFCGYGMSSELDVSFSEETNAIIARDIQFYSMCEHHMLPFYGKIHIA
                     YIPNGKVFGISKLVRLTEKYSRRMQIQERLTKEIADEIAKRDVSGVLVIIEGEHLCMK
                     MRGVRNNSSILTVAYRGVFEEKDLRENVLSLIYTRQNNIRNI"
     gene            complement(1095..1841)
                     /locus_tag="VLA74_10610"
     CDS             complement(1095..1841)
                     /locus_tag="VLA74_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HSF51200.1"
                     /translation="MTKQNMLTKDKKVQLSEIFTSIEGEGIFFGTKTMFVRMAGCHLR
                     CYWCDTGYALPLTSGNTYHIDEVKKMIKKNLKENTYKINFTGGEPLIQYRAVKDLARF
                     IKEEIGLRTYIESSCYDFNRFNEILPYFDICKIEFKMKDSMVVEPEHYYNLLENELEC
                     LKIAIKNNKITYIKIVVSNNTDINEFKKLIETIFSIIHAESLAGFIIQPTTKIDEPTV
                     DNLLKFYDLIYPRYNDVRVIPQLHKVIGAS"
     gene            complement(1810..2535)
                     /locus_tag="VLA74_10615"
     CDS             complement(1810..2535)
                     /locus_tag="VLA74_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase"
                     /protein_id="HSF51201.1"
                     /translation="MLNRSDISSQSVVCIVSGGLDSICTSAYLRKQNFNLYMVTFSYG
                     QRAIHEIECAKKFSDYLNFKEHKIVDISFMKEIYGETNALTDKQQNIPENFDYKIVVP
                     LRNGIFITIATAWAMSIGAKIVVYGAHSDDHNYPDCRPEFALSLSKALNLGESDGIAL
                     GFRNKVEIWSPAVDRIDKSNLIKMGYEYLGDKIFQTWSCYTDGINIGERRIHCGICES
                     CINRRIAFKNSNIRDKTEYAYKR"
     gene            complement(2596..3726)
                     /locus_tag="VLA74_10620"
     CDS             complement(2596..3726)
                     /locus_tag="VLA74_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication factor C small subunit"
                     /protein_id="HSF51202.1"
                     /translation="MRSPVCDIFRTIKSILQEEKKILINLLNLYTLFRMRPNANDTNI
                     SELMWVEKYRPKKIEQIVNQKDIIRSLKNLIKKPDEIPHLLFAGAAGIGKTTTALCLS
                     KELLGEGWRRDVLELNASDERGIKMVRERVKEFAAVIKLPSGKDLKDPSNKNDRQYRI
                     IILDEADEMTSEAQTALRRIIEDSSKTTRFIIICNYLSQIIEPIQSRCAVFHFTKLAE
                     KEIVEHLKKICDSEGVEYKDQALLKIYNYTEGDLRHSINILQAASGFGEINLSNVNAA
                     MGLSGRSKIGEVIKLSLDGKFDDARIKLLELLFVYGLSAADFFKYSYQEIKDMKLENI
                     EEIMSIMAEYDYRLSVGAHSEIQLTAFLAQLARIGSNNKSKK"
     gene            3802..4380
                     /locus_tag="VLA74_10625"
     CDS             3802..4380
                     /locus_tag="VLA74_10625"
                     /inference="COORDINATES: protein motif:HMM:NF017704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51203.1"
                     /translation="MSHTMAEINNANNIYNYDNIKDRIEFIQKIYYAKYLMEDIRITF
                     KKNVSINLDNLSLEGKDGEITSIPRWLANILEANGNVEIQDIDVLVYISRSLNRERIS
                     KPHDLSGIDIDFYIRVNDYIKRLKESEKESILVSLNSFITSRIEKIVKLAAASSLTTD
                     LERKLSAEEIELYNFIHNSSYSFKQLAVNKLG"
     gene            4373..6442
                     /locus_tag="VLA74_10630"
     CDS             4373..6442
                     /locus_tag="VLA74_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minichromosome maintenance protein MCM"
                     /protein_id="HSF51204.1"
                     /translation="MAELKTESAIVNDLEEFLRAFKDRSGNYKYFDRINNMMAANSTS
                     LLVDYIDFDTLKPDLAKKITDDPDEMLEAFNKAVFSILYEIHPDYAEEISNNIKVRIG
                     NYTVQKGLREINAEAINKLIAVSGMVVRTSEVKPLAKKIGYSCLNCGEINEAQLKSLV
                     LKKPLKCKQCSEKELEMDPDTSIFIDFQMVRLQELPEDLPAGHLPHYLEVTVIGDLVD
                     QCRPGDRILLTGIVRIEQEQLSQHVKTSLFKLRMEGNNIEYLGGRAGDKDNRTMERIE
                     ISNEDEKRIFALAKKSNSYDILISSYAPHIYGHEVIKEVILLLIVGSVTKILDDGSAR
                     RGDINVLLVGDPGTAKSEMLKFAAKIAPRGLYTSGRGTTAAGLTAAVLRDKSGIMMLE
                     AGAVVLGDQGLVCIDEFDKIKPEDRSALHEVMEQQTCSVAKGGIVATLNARTSILAAA
                     NPLYGKYDPFKNITENVNLPIPLLTRFDIVYVIRDTPEREKDNLIASHILEIHRDTER
                     NSQSVIDTDIFSKYLAYSKNMEPKLTVEAIDKIRDYYMKMRNVESEGMITVTPRQLEG
                     LVRLATARSKLLLKDYVDSEDAERAIYLIQTMLETAGVDVNTGKVDLGVLHGKPQSEI
                     SKLKLFMEIFNALSGQDKNDVEEKTFIQELAQTGRFSEDDAKNFINKAMQNGQIYERK
                     SGYYAKA"
BASE COUNT         2280 a         1132 c          974 g         2305 t
ORIGIN      
        1 ttagtagttt attattttaa tcaaaatagt tcgtgataat taattcgtga tgataaaaaa
       61 tttcttttat taaacgtgct ttctttaata ttcctcatca aattcatcac cattctcttc
      121 ttcaacttca tccaaatctt catcaaattc ttccctctct tcagcagtct taaaaggtag
      181 atcagcctca ccggtaactc cacaaactgg acacttaaat tctgtagttt gtccctcaag
      241 atccagtaaa aattccttgg agaatacctc gtcgcatttt gaacaaacta atgttccttg
      301 aatgttgtct tgagtgaact tatgagactg gactctaaag atcgcttctg ccattcttct
      361 tacctataaa aaatttactt tattataagc cttctcatta taagaattat ataataatta
      421 ctgctcgctc tatttttcat aatcaaatat cattaaattt gcataaactc gatatttttt
      481 atatatttct tatattattt tgccttgtat agatcaagga aagtacgttt tctctaagat
      541 ctttctcttc aaatacgccc ctatatgcaa ctgttagtat tgaactatta tttctaactc
      601 ccctcatttt catacaaaga tgttcccctt caattattac tagtacaccc gatacatctc
      661 ttttggctat ttcatcagca atctccttag tcaatctttc ttgtatttgc attcttctag
      721 aatacttttc agtcagtctg acaagttttg atataccaaa tacctttcca tttggaatat
      781 atgctatgtg aatttttccg taaaatggaa gcatgtgatg ttcacacata ctatagaatt
      841 gtatatctct tgcaattata gcattagttt cttcactgaa gcttacatcc agctcggaac
      901 tcattccata tccacaaaaa atctcttcat acatacctgc aatacgtcta ggagtctcaa
      961 tcaatccttc tctattggga ttttctccta attctataag caactgtcgt attatcttct
     1021 caattttatt tttgttcata aaaccagttt tttgtatccc agttttttgt atccttttat
     1081 cggacattct ttatttaact tgctcctatt actttgtgta actgaggaat aaccctaaca
     1141 tcattatatc ttggataaat cagatcgtaa aatttcaaca aattatccac agttggttca
     1201 tctatcttag tagtaggctg tattataaat cctgctaagc tctccgcatg tataatactg
     1261 aaaatggttt ctatcaattt cttgaattca ttaatatctg tattatttga aaccacaatt
     1321 ttgatataag taattttatt atttttaatg gctatcttta aacattctaa ttcattttct
     1381 agaagattat aataatgttc aggttcaacc accattgaat ccttcatttt aaattcaatc
     1441 ttacaaatgt caaaataggg aagaatctcg ttaaatctat taaaatcata acaagaagat
     1501 tctatatatg ttcttaaacc gatctcttct ttgatgaatc tcgctaaatc ttttactgct
     1561 ctatattgaa ttagaggttc tccaccagta aaattaattt tgtatgtgtt ttcttttaaa
     1621 ttcttcttga tcattttttt tacctcatca atatgataag tatttccact agtcaatggt
     1681 aaagcatagc cagtatcaca ccagtaacat ctcaaatgac aacctgccat tctaacgaac
     1741 atggtctttg taccgaagaa aattccttct ccttcaatac ttgtaaatat ttcactaagc
     1801 tgcacttttt tatcttttgt aagcatattc tgttttgtca cgtatattgg aatttttaaa
     1861 agctattctt ctatttatac acgattcaca aattccacaa tgtattcttc tttctcctat
     1921 gttgatacca tctgtataac aactccatgt ctgaaaaatt ttatctccta aatattcata
     1981 ccccattttt atcagatttg atttatctat tctatcaaca gctggagacc aaatttcaac
     2041 cttattacgg aatcccagag caatcccatc actctctcct aagtttaaag ccttactaag
     2101 agataaagca aattccggtc tacaatctgg ataattatga tcatcactat gtgccccgta
     2161 aacaactatt ttcgctccaa tactcatagc ccatgcagta gcaatagtta taaatatccc
     2221 atttcttaga ggtacaacta ttttataatc aaaattttct ggaatattct gttgtttgtc
     2281 agttaaagca tttgtttctc cataaatttc tttcataaac gatatatcaa caatcttgtg
     2341 ttctttaaaa ttcagataat ctgaaaattt cttagcacat tctatctcat gtatggccct
     2401 ctgaccataa ctaaacgtta ccatatacaa gttgaaattt tgttttctca gataagcaga
     2461 agtgcagata gaatccaaac caccgctaac aatacaaact acagactgtg aagatatatc
     2521 cgatctgttt aacataaaag acatactttt aatatattta ttaaattaat atagtaaaat
     2581 actctcgttg acatttcatt tttttgactt attgttagaa cctattctag ctaattgagc
     2641 aagaaatgca gttagttgaa tttctgaatg agctccaacc gataatctgt aatcatattc
     2701 agccattatc gacattattt cttcaatgtt ttcaagtttc atatctttta tttcttgata
     2761 agaatacttg aaaaaatccg cagccgataa tccatagaca aataataatt ccagtagctt
     2821 gattcttgca tcatcgaatt taccgtctag agacaatttt atcacttcac caatttttga
     2881 tcttcctgat aatcccatag ctgcattaac attcgaaaga ttgatttcac caaatcctga
     2941 tgctgcctga agtatattaa tagaatgtct caaatcccct tctgtgtagt tataaatctt
     3001 taataaagct tgatccttgt attctactcc ttcactatca caaatcttct ttaaatgttc
     3061 tactatttct ttttccgcca atttagtaaa atgaaatact gcgcatctac tttgaatagg
     3121 ctcaattatt tgtgaaagat aattacatat tataataaat cttgttgttt tagagctatc
     3181 ctcaattatc cttcttaatg ctgtctgtgc ttctgatgtc atttcatctg cttcgtcaag
     3241 aattatgatt ctatattgtc tgtcattttt attactagga tctttcaaat cttttccact
     3301 cggaagtttg attaccgcag caaattcctt aacacgttct cgaaccatct ttatacctct
     3361 ttcatctgaa gcatttagct caagaacatc tcttctccat ccctctccca ataattcctt
     3421 tgataaacat aaagctgtag tagttttccc aatacctgca gcaccagcaa acaacaagtg
     3481 tggtatctca tctggttttt taatcaaatt ttttagagat cttataatat ctttttgatt
     3541 aactatctgt tcaatttttt taggccgata tttctctacc cacattaact cggatatgtt
     3601 agtatcattg gcatttggac gcattctaaa tagagtatat aaatttaata agtttattaa
     3661 tatcttcttt tcttcctgta agatagattt tatagttcta aaaatatcac atactggtga
     3721 tctcacttca accaaattgt tttgttaata aaaatagtta gtctaagttg atttaatatt
     3781 atggtcttga tataaaaaca gatgagtcac acaatggcag aaattaataa cgctaataat
     3841 atctataatt atgacaatat caaagacagg atagaattta tccaaaaaat ctattatgca
     3901 aaatatctca tggaagacat cagaataacc tttaaaaaaa acgtctcaat aaatttagat
     3961 aatctttctc ttgaaggaaa agacggtgaa attacttcta ttcctagatg gttagcgaat
     4021 attcttgaag ctaatggaaa tgtagaaatt caggatattg atgttttagt atatatctct
     4081 agatctttaa atcgcgaaag aatttcaaag cctcatgatt tatccggaat agatatcgat
     4141 ttttatatac gagtaaatga ttatatcaaa agattaaagg aaagtgaaaa agaatctata
     4201 ttagtttctc tgaattcttt tataacttca agaatagaga aaattgttaa attagctgct
     4261 gcgtcatctc tcacaacaga cttggaaaga aagctgtctg cggaagaaat agaactgtat
     4321 aatttcattc ataattcttc ttattcattt aaacaattgg cggtgaacaa acttggctga
     4381 gcttaaaact gaatctgcta tagttaatga tttagaagaa tttttacgtg cctttaaaga
     4441 tagatctggg aattacaaat attttgatag aattaataac atgatggcag caaattccac
     4501 ttcactatta gttgattaca ttgattttga tacactcaaa cctgatctag caaagaagat
     4561 tactgatgat ccagacgaga tgctagaagc atttaacaaa gcagtttttt ctatacttta
     4621 tgaaattcat ccagattatg cagaagaaat atcgaataac attaaagtta gaataggaaa
     4681 ttatacagta caaaaagggt tacgagaaat aaatgcagaa gcaattaata agctaattgc
     4741 ggtttctggt atggtagtaa gaacgtctga agttaaaccc ctagcaaaaa aaattggtta
     4801 tagttgtctt aattgtggtg aaataaatga agcacaacta aaaagtttag tattaaaaaa
     4861 accattaaaa tgcaaacaat gttcagaaaa ggaattggaa atggatccag atactagtat
     4921 ttttattgat ttccaaatgg taagattaca ggaactacca gaagaccttc ctgcaggtca
     4981 tctaccacat tatcttgaag ttactgttat tggtgacttg gtagatcaat gtagacccgg
     5041 cgatagaatt ctactcactg gaattgtaag aatagagcaa gaacaattat ctcaacatgt
     5101 aaagacaagt ctctttaaac tcagaatgga aggtaataat atagagtatc ttggaggtag
     5161 agctggagat aaagataaca gaacgatgga acgaatagaa ataagtaatg aagatgagaa
     5221 acgtattttt gcactcgcaa agaaaagtaa ttcttatgat atcttgatat catcttatgc
     5281 tccacatatt tacggtcatg aagtgattaa ggaagtgatc ttgttattaa ttgttggatc
     5341 agtaacaaaa atattagatg acggatccgc aagaaggggc gatatcaacg ttcttttagt
     5401 cggagatcct ggaacagcaa aatccgaaat gttgaaattt gcagctaaaa tagctccgcg
     5461 aggactttac acttcgggga gaggtacaac agctgctggt ctgacagctg cagttcttag
     5521 agataaatct ggcatcatga tgttagaagc aggagctgtt gtattggggg atcaaggatt
     5581 agtgtgcata gatgaatttg ataaaataaa acctgaagat cgttcagctc ttcatgaagt
     5641 tatggaacag cagacttgtt cggttgcaaa gggaggaata gttgcaacac taaatgcaag
     5701 aacctcgatt ttagcagctg ccaatccatt gtatggaaaa tatgatccgt tcaaaaatat
     5761 tacagaaaat gtaaatttac cgattccact cctgacacga tttgatatcg tttatgtgat
     5821 acgagatacg ccggaaaggg aaaaagataa tcttattgct agtcatattc tagaaattca
     5881 tagagacaca gaaagaaata gtcaatccgt gattgataca gatatcttta gcaaatatct
     5941 tgcttattca aaaaatatgg aaccaaaatt aacggtggaa gcaattgata agataagaga
     6001 ttattacatg aagatgagaa atgtagaatc tgagggtatg ataaccgtca ctccaagaca
     6061 gcttgaagga ttagtaagac ttgcaaccgc acgatctaaa ttattattaa aagattatgt
     6121 agattcagaa gatgcagaac gagcaattta tttgatacag actatgttag aaactgcagg
     6181 agtagatgtt aatactggta aagtagatct aggtgtttta catggcaaac ctcaaagtga
     6241 aatatcaaaa ttgaaattat ttatggaaat ttttaatgct ctatctggac aggataagaa
     6301 tgacgtagaa gaaaaaacct ttattcagga acttgcacag acgggaagat tttcagaaga
     6361 tgatgcaaag aattttatta ataaagctat gcaaaatgga cagatatatg aacgaaaatc
     6421 aggatattat gctaaggcat aaaaattctg attgtattta attattttta tctatattaa
     6481 aatataaaca ggattataaa tgtgaaaata cttataaatt aaaattagca gattaaacgt
     6541 caatgatgat ctaaaagaga tcatgaatat aattcctcag aacatgagaa ttcctctaga
     6601 acatcagatt gcctaaaaat gttctgaaaa tcaggtaaat cgtgcaaatt tcatcataac
     6661 aaagggaaaa gattctgttg taaaaagcag t
//
LOCUS       DATIAS010000532         3494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1593458, whole genome shotgun sequence.
ACCESSION   DATIAS010000532 DATIAS010000000
VERSION     DATIAS010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1593458"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            815..997
                     /locus_tag="VLA74_10635"
     CDS             815..997
                     /locus_tag="VLA74_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51205.1"
                     /translation="MLAYDFIFKYDILDTKSQKEISTSIDNIKNNLKEIAGCYLFFKD
                     SYNAYKHGYRLWVGKD"
     gene            1468..1791
                     /locus_tag="VLA74_10640"
     CDS             1468..1791
                     /locus_tag="VLA74_10640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51206.1"
                     /translation="MNLEKELFKFPMQVIDIIQGLDHPDRRRILEVIINSGKGESTFE
                     EIMKKTGYTSDTVNIHLNHMLMYGLLDRYENTDDLSKNIEVRHYKLSQLTRSFINKLM
                     AIFDF"
     gene            complement(2124..2303)
                     /locus_tag="VLA74_10645"
     CDS             complement(2124..2303)
                     /locus_tag="VLA74_10645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51207.1"
                     /translation="MSLFLKLYHAIIQNNIKPNEIVNLVKNSNKLANLKTAIKMKKEK
                     FYFIEENIKQHQTQT"
     gene            2838..2975
                     /locus_tag="VLA74_10650"
     CDS             2838..2975
                     /locus_tag="VLA74_10650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51208.1"
                     /translation="MGNQTIRDPTLFQIVGSNIKECEKRFGVVAAQRHYSNAQFLASF
                     Y"
     gene            3056..>3494
                     /locus_tag="VLA74_10655"
     CDS             3056..>3494
                     /locus_tag="VLA74_10655"
                     /inference="COORDINATES: protein motif:HMM:NF024240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF51209.1"
                     /translation="MSSKVDDSSDVVIIGGGLAGLTTAALLARAGKLVTLFEQSSKEI
                     GGRSRTSIFNEFYFNQGPHAFYLSDLGAEILQELGIKYTGGIAVGKGTSYYIMDGKKN
                     EMPSDWSRIPFTKNNGDSYEIDGSQFFNSLAKINFSQLESVTVQ"
BASE COUNT         1288 a          463 c          515 g         1228 t
ORIGIN      
        1 tacaactgga actgttaatg tagaagctgg aaaaaaaaag ttaaaggaaa aggtaaagga
       61 aaaggtaaag aaaatctttc aagggcatga acagagtgaa gaaaagaaat agcaggtaaa
      121 aagaaatttc ttgtaaatta tttttaatcg tgaggatgtt atagaatttg gtctttattt
      181 atatatgaag caggttatat ataatatggt tttaatgact caaaaatctt ttagtatatt
      241 taatttctct atatattggc ttgtttcaaa gttattatgt tgttaagact taagaaatta
      301 tgtttaaaat gattataaat aataatacaa aaaaatttga ataataaatt tgattcttaa
      361 atcttatttc aacaggttca tatctgcttg gtcccttgtc ttaagagggt tcaatactaa
      421 catactatgt ttatttacat taattttttt cttattaatg tgtcagttaa agagagagaa
      481 gatgtgactg atgaagaaat gttatacgaa ttctattccc tagattccct aaagtatcta
      541 ttgatatgct gagtcaacta aaacttagtc ttcaaaaaat tctaccaaaa aatgatccat
      601 tgtatgaaaa aaagatactt atttttagat ttgaaattat tgccagatac tgtcaattag
      661 ctgaaagttt aggaggttaa tattaggtta taaaagcctc aatattacta ctaataagca
      721 attaaataac aaccgtacac aacaagtttt aaaatatctt tctacgtata ccattaacaa
      781 tatagacaca ttttataaaa atatcgaaaa taatatgctt gcatatgatt ttatatttaa
      841 atatgatata ttagatacaa aatctcaaaa ggaaatatca acatcaatag ataatattaa
      901 aaataattta aaagaaatag ctggttgtta tttattcttt aaagattcct acaatgcata
      961 taaacatgga tatagactat gggtgggaaa ggattaatct aataatatag aatctgccat
     1021 atttcgtaat aaaaaggact tgaagatcat attccattag atgatcaatc tcttagtttg
     1081 gcaataaaat ccggaactta ttatttaaat ttatttgata ttctaaagtc taaccataaa
     1141 tctatatttt attacctcct aaatgctgga aataaaacac taacaataaa gtttctttca
     1201 catttagaaa ctacaagaga aaaaatatgt agtgttagtt aatatgtttt aatatacaaa
     1261 accaaaattt atctttttga aaatgggttt ctcaattgag caaatttaga tgacaatttc
     1321 agatagggat ctttttccat catttcaatc tcttctattt ctgaaattta tttacaatga
     1381 atggtattat agattgttaa ttaattttca atgtgttatt aactttacta aataaaataa
     1441 taaagaggag tgaaaaaata aagagagatg aatcttgaga aggaattatt caaatttcca
     1501 atgcaagtaa tagatataat acaaggttta gaccatcctg atagacgacg aattttagag
     1561 gttataatca attcaggaaa aggagaatca acctttgaag aaataatgaa aaaaacagga
     1621 tatacttcag atacagtaaa cattcatttg aatcatatgt taatgtacgg attgttagac
     1681 cgttatgaaa atactgatga tttatcaaaa aatatagagg ttagacacta caaactaagt
     1741 caacttacaa gaagtttcat taataagtta atggctatat tcgatttcta accacaaaat
     1801 ttcatataga aaataataat tgcagaatgg aataagatga aatctgcaaa cattatagac
     1861 ttcataagaa ttagctatat ggctgctgct actgctacta ataaatcatc aatagaagat
     1921 gatgtcactg gattgtagga acttttctaa agtataacaa taaccacacc atacaaaaga
     1981 tgattaattg agaaaatcca atgactaaat aaataataat taaaaataga agatattaat
     2041 tctgactaat tagacaatta attatttttt tatctaatat tggttctact aaatcagaaa
     2101 tatccactat aactattcat catttatgtt tgtgtttgat gttgctttat attttcttca
     2161 ataaaataga atttctcttt tttcatcttt attgcagttt ttagattggc aagtttatta
     2221 gagtttttta ctaaattgac tatttcatta ggtttgatat tattttgaat aattgcatga
     2281 tacaatttta agaacaaact caaattattg tttatttcct catataataa aactaattta
     2341 tgaaaacttc tagtttcgaa taatccttat ataatttaga tatcttttga gcatttaaat
     2401 tgagtacaac agctacttct ttggttcttt gccccccgat aaaagggctt ctagtgcttt
     2461 tgtgtttcta ttgatttctc cgctgaaatt ccccctattt ttctaatgat cttgctaata
     2521 tctctaaata ttgtgtcaaa aacaattcac acacctctgg accgacatag taaccatgat
     2581 taattttttt atattatttg atattccttc tctatttgtt ttctcattgt ctgttctgtt
     2641 gacacatagt atttttatgc tctgaatccc aattaacaat atgtatagta gtacatgaaa
     2701 actattgttg attttcataa tcaattcttt attttggctg atttcttttg aggtatcttt
     2761 atttgttata ggcaaattga aacttatata tccaaacatc tctgcagtga taaccataca
     2821 ctcgactagc ttttgatttg ggcaatcaaa cgataagaga tcctacactc ttccaaatag
     2881 ttggaagtaa cataaaagaa tgtgaaaaaa gatttggtgt agtagcagca cagaggcatt
     2941 actccaatgc tcaatttctt gcatcattct actgatgtgg caataaacca gccatatata
     3001 aaataccatt gagaaaagca atacttatca gcatttgttg acatataatt atccaatgtc
     3061 aagtaaagtt gatgatagtt cagatgtcgt aattattggt ggagggcttg caggtctcac
     3121 tactgctgcc ctacttgcac gtgctggaaa actagtaacc ttgtttgagc aatcatcaaa
     3181 ggaaattgga ggtcgttcga ggacttcaat atttaatgag ttttacttta atcaaggtcc
     3241 tcatgcattc tatctttcag atttgggtgc tgaaatttta caagaattag ggatcaagta
     3301 tacgggtggc attgctgtgg ggaaaggaac ttcttattat ataatggatg gaaagaaaaa
     3361 cgaaatgcca agcgattgga gccggatacc ttttacaaaa aataatgggg actcttacga
     3421 aatagatgga agtcagttct ttaattcact tgccaaaatt aatttttcac aattagaaag
     3481 cgtcacggtg cagg
//
LOCUS       DATIAS010000533         3054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_914782, whole genome shotgun sequence.
ACCESSION   DATIAS010000533 DATIAS010000000
VERSION     DATIAS010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914782"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(429..821)
                     /locus_tag="VLA74_10660"
     CDS             complement(429..821)
                     /locus_tag="VLA74_10660"
                     /inference="COORDINATES: protein motif:HMM:NF016925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese catalase family protein"
                     /protein_id="HSF51210.1"
                     /translation="MTIKAYRATVSYLIVRDLAHEKVFAKALETLGVEWNKTLPVPKV
                     DTSKMPEVRELEELNMHNQQWTMTNEKSGLSLIFNGESPFKDGQLETLDGLPKGAAIP
                     NLPEAPQEFSPGLDKELKSKVKTLMKST"
     gene            complement(760..1305)
                     /locus_tag="VLA74_10665"
     CDS             complement(760..1305)
                     /locus_tag="VLA74_10665"
                     /inference="COORDINATES: protein motif:HMM:NF016925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese catalase family protein"
                     /protein_id="HSF51211.1"
                     /translation="MFTSINKLPNAIPKSDGPNPKAAQALQEGLGGQFGEMRTMMQYL
                     FQNINFRGDAKPYQDLLRSIATEEMGHVELISNTINVLLEGSTTQADPNELSLAVALE
                     SPNIHHFLVAGQSCRPVDAAGNPWSATYVYDSGNLVLNMLYNLMLEATGRLQKCRLYE
                     MSDDKSIQGNGFLFNCKRSRS"
     gene            1897..2076
                     /locus_tag="VLA74_10670"
     CDS             1897..2076
                     /locus_tag="VLA74_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51212.1"
                     /translation="MVITGDFFLSDPQITKEEKDWLYPQMIQAIKKIVANSIILVFSP
                     TRLSNELWIMIRNDE"
     gene            complement(2577..>3054)
                     /locus_tag="VLA74_10675"
     CDS             complement(2577..>3054)
                     /locus_tag="VLA74_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51213.1"
                     /translation="QIKKETGQNKVNIVAHSKGGLDARVYLANNTTKDVANLVMIGTP
                     NAGSPLAESCEVGTPAVYDLRPGAAATEVKMNPNTKYYTIAGDWNPQSENYQLFFSFE
                     QVGFSSLPIPNDGMVSVSSVESQDYFINLGHSTNCHSNLLSYYEYELAKDLILGKR"
BASE COUNT          989 a          476 c          443 g         1146 t
ORIGIN      
        1 tgcctcctct ttcataggca ttagtttttt ttcatgttct gcttttaaca atccttttga
       61 ttttagttct tctacagcct tttgagctgc tttttctaaa ccaattgcct caccaatttt
      121 ttgctcgatt aattcttttt cgaccattta tatttcattg ttaatattac aataaagttt
      181 ataacgatat taataaatga tataatggta attattagag aacttatttc ctagtataag
      241 aaatttttct agtgaataat tatcctatat gcttaaatat aatttttaat aacaaaaaat
      301 aaggaagaaa taaataagaa ttttaatttc aaggctaatt ctatctattg ctgcttctta
      361 ccctttgtga gccgttaagt ctgatctttt caatgtcttt ttccttatga cattcttctg
      421 ctttggaact atgtagactt cattagagtt ttaactttcg attttagttc tttatctagt
      481 cctggagaaa attcttgtgg tgcctctggt aaatttggta ttgctgctcc tttgggaagt
      541 ccatccaatg tttcaagttg gccatcttta aatggagatt ctccattaaa tattaaagat
      601 aagccagact tttcatttgt cattgtccat tgttgattat gcatattcag ttcttccaat
      661 tctcgtacct ctggcatttt tgaagtatca acctttggaa ctggtaatgt tttgttccat
      721 tcaactccta atgtttctaa agctttggca aatacttttt catgagcgag atctcttaca
      781 attaaatagg aaaccgttgc cctgtatgct tttatcgtca ctcatctcat acagtctaca
      841 tttttgaagc ctacctgttg cctctaacat taaattataa agcatattta aaactaaatt
      901 tccactgtca taaacataag ttgcagacca tggatttcct gcagcatcta ctggtctaca
      961 actctgtcca gcaactagaa aatgatgtat atttggtgat tcaagtgcaa cagcaagtga
     1021 gagttcatta ggatctgctt gtgttgttga tccttctaat aggacattta ttgtattaga
     1081 aattaattca acatgaccca tttcttctgt tgcaattgat cttaaaaggt cttgatacgg
     1141 ttttgcatct cctctaaaat ttatattctg aaataagtat tgcatcatag tcctcatttc
     1201 tccgaattgt cccccaagac cctcctgtaa agcttgtgct gctttgggat taggtccatc
     1261 acttttaggg atagcatttg gtagtttatt aattgatgta aacatgaact tatttgtttt
     1321 ataagttata taaccattgt atgatatgaa aagtagtgtt tccaagatta tgaaataata
     1381 ttataaatat aacaatttta aatcatagat tttaagaaac attaatctaa gattttaaaa
     1441 ataattcata aaatagatta tttataatat acatatatat aatatacaaa taattccaac
     1501 tatatcgatg gttttgtaac ttggctacct tatccgaatt tgataagacc tctaacaagt
     1561 ttgatttatt ttttgattca ccatgttaaa aacaagaaga cgatacaaaa aagaagaaca
     1621 attggattaa tagaggaggt gatgacatag cttgttttgt taaacctcat tcagattttg
     1681 tttgtaatac tatggtcaaa atctcctact gtatatgtat tggttacaga taacaaattt
     1741 gacttttaca atataacaga aatagctaat aaaaaattca ggatattaga tagaacatta
     1801 aaaaatgtaa tagtacaaag atttttacaa tacatcaatt gacacagttt ttgataatag
     1861 atttagaaaa ggtttagaaa atacaaatcc aaattattgg ttataacagg tgactttttt
     1921 ctttctgacc ctcaaattac aaaagaagaa aaagactggc tatatcctca aatgatacaa
     1981 gcaatcaaaa agattgttgc aaattctatt atccttgtat tttctcctac gagattgtca
     2041 aatgaattat ggataatgat aagaaatgat gaatagctaa cttgtcaata gactagttaa
     2101 tttattatta ctatcaaata tagtgaaccc gagaaaagta cgggcccgtc gggagttgaa
     2161 tagtcatgat ttcagtgttc aatagcaata atataatata atttgaaacg gccatacctc
     2221 taaaaatagc atcaaacggt atagaaggct atggtggtgt tgtatgcatt tgtctatatt
     2281 ttaatatatt tatattgcca attatgaatt taaaaaattt cctttggtta ttatatactt
     2341 taatcttaat aattaataat ggtaacgtag attgcaatag gagaaaatat tcaggatttt
     2401 tccgttataa tgattgttgt ttctgttatg acctttatct cctataaatt aaaacaacct
     2461 ctagttattg gttatataat tgcaggaata atcatagaac tgtatttctt tttaataaaa
     2521 agaattgaat atagtaatag aatggttgta ttctatcttc aatttctatt tattctttat
     2581 ctctttccca atatcaaatc ttttgccaat tcatattcat aatagctcaa tagattagaa
     2641 tgacaatttg tgctgtgtcc aagattaata aaataatctt gtgattctac acttgataca
     2701 gataccatgc cgtcattagg tatgggaagg gaagaaaacc ctacctgttc aaaactaaaa
     2761 aatagctgat agttttctga ttgaggattc cagtcaccag caatagtata gtattttgta
     2821 tttggattca tttttacttc tgtagctgct gcaccaggtc ttaaatcata tacagcagga
     2881 gtaccaactt cacatgactc tgctagaggt gagcctgcat ttggtgttcc aatcattaca
     2941 agatttgcaa catcctttgt tgtattatta gccaagtata ctcttgcatc caatcctccc
     3001 ttgctgtgag caacaatatt cactttattt tgtccagttt cctttttgat ttgt
//
LOCUS       DATIAS010000534         2501 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1050780, whole genome shotgun sequence.
ACCESSION   DATIAS010000534 DATIAS010000000
VERSION     DATIAS010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050780"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /gene="tfb"
                     /locus_tag="VLA74_10680"
     CDS             complement(<1..472)
                     /gene="tfb"
                     /locus_tag="VLA74_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018540.1"
                     /note="stabilizes TBP binding to an archaeal box-A
                     promoter; responsible for recruiting RNA polymerase II to
                     the pre-initiation complex; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription initiation factor IIB"
                     /protein_id="HSF51214.1"
                     /translation="MQSIIQCQTCDPNEAKMITDNEAGEVICSKCGIVAARSIEYTKK
                     IWNTADDEHLNTSNGYPSSLARHDKGLSTTIARTQRDSTGHIIDSRMQVRFNRLRNWD
                     RRSQIHKSSRNLSIAFRQLDALKDKLNLPPAVIEKAAYIYRKVQEDGLVKGRKIN"
     gene            995..1879
                     /locus_tag="VLA74_10685"
     CDS             995..1879
                     /locus_tag="VLA74_10685"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF51215.1"
                     /translation="MIGNKEFVTDFRSLLDKKRFEEQIIDGQSGFYDKIEEVFIPENV
                     FATLFNNIGPRYQPSNIEIQNMIQSSRKRVSNTIKDIHQNTKDSYAQIFLSYLSHKFL
                     LENKKQPRDMVILYIDLVGSTALTAILNPEELSMIVRIFCQEISICISRYFGYVLKYA
                     GDAVIGYFPEGSILSKGDLHEHAIKCGFYMQKLLDESVNEILYQNKYPKLRSRIAIDV
                     GRNQIVVLGSEPDLLGHVISRAAKIMGKAPPNNIIIGENVFRNLNDNTKEKFPLQDKF
                     MLFETGEIYSTHMTNKKK"
     gene            1930..>2501
                     /gene="gvpD"
                     /locus_tag="VLA74_10690"
     CDS             1930..>2501
                     /gene="gvpD"
                     /locus_tag="VLA74_10690"
                     /inference="COORDINATES: protein motif:HMM:NF018756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle protein GvpD P-loop
                     domain-containing protein"
                     /protein_id="HSF51216.1"
                     /translation="MERIEPDSGLEDIHKFITNENKSLLIRGKSGTGKATLALEIAKT
                     HSNKFEVIYISRNISVNNIYNRFPWTKNLLKSYNIVSINTNPDFMLSEASVILNSIMN
                     TLSNRIQKIEDPFVPLKEKPRPFIILEIWDNLVKELDNKDIIRTQKILSSLIDKNGGF
                     IIFLTEDMDNTDLDNLIDGIITLDQSFYKS"
BASE COUNT          912 a          359 c          384 g          846 t
ORIGIN      
        1 tatttatttt ccttcccttt actagtccat cttcttggac ttttctgtaa atataagcag
       61 ctttttcaat tactgcaggt ggtaggttaa gtttatcttt taaagcatct aattgtctga
      121 atgcgatact caagtttcta gaagatttat gtatttgaga acgtctatcc caatttcgaa
      181 gtctattaaa ccttacttgc attctggaat caattatgtg gccagttgaa tctctttgag
      241 ttcgggcaat agtagtagaa agtcctttat cgtgacgcgc taaagatgaa ggatatccgt
      301 tcgatgtatt taggtgttca tcatctgctg tattccagat tttttttgta tattctatac
      361 ttctggcggc tactatacca cacttagaac atataacctc acctgcttca ttatcggtga
      421 tcattttcgc ttcgttcgga tcacatgttt gacattgaat tattgattgc atattttggt
      481 ttgtatttat tataaatata ggcaaacaaa tatataaatc ttatagtatt atgtataaaa
      541 tttttaaccg ttatatcatc gaaaacaaat aatagaaatc tatcatccac caattaatcc
      601 tgttatgaat acctggtata gattgatagc tgtttcacgt tatttttaaa ctagaagtaa
      661 ttaacaacct tgttgaaaaa ggtcctcata cgaaatgatt tgtaagttca tataaaaaaa
      721 aataaacttc ttttatgaat tccactatat cacaaaatta tattcatgtt ttcgaaatct
      781 aaaatggtgc acattgaaat tttgtttata gaatttcaga tattatatga tacgtgacga
      841 aatcccttat tttgttaatt tttatcttta ctgtatttcc agttataata atcaattgta
      901 atcaaacttg aaagtataat aaaaccgtta ttcaaagtaa tataacaaat aataatggca
      961 ttgaatgact agttaataca aaggtaagca attaatgatt ggtaataagg aatttgttac
     1021 tgatttcaga tcattattag ataagaaaag atttgaagaa cagataattg atggacaatc
     1081 tggattttat gataagatag aagaagtttt tattccggag aatgtgtttg ctactctttt
     1141 taacaacata ggacctagat atcaaccatc caacatagaa attcaaaaca tgatccagag
     1201 tagtcggaaa agagtgtcaa acacaataaa ggatatccat cagaatacca aagattctta
     1261 cgctcaaata tttttgtcct atttatctca taaattcctg cttgaaaaca agaaacaacc
     1321 cagagatatg gtaattctct atatagatct ggttggttct acagcactaa cagctatact
     1381 gaatcctgaa gaattatcca tgatcgttag aatattttgt caagaaattt caatttgtat
     1441 atcgagatat ttcggttatg tgttaaaata tgccggtgat gcagtaattg gttattttcc
     1501 tgagggatcg atactatcga aaggagatct acatgaacat gcaataaaat gtggatttta
     1561 tatgcagaag ttgttagatg aatcagttaa tgaaattctc tatcagaata aatatcctaa
     1621 gttaagaagt cgaatagcaa ttgatgttgg tagaaatcag atagtagtgc ttggatcaga
     1681 accagatctg ttaggtcatg tgataagcag agcagccaaa atcatgggta aggcccctcc
     1741 taacaatatc ataataggag aaaatgtttt tagaaatctc aatgataata ctaaagaaaa
     1801 atttccttta caggataaat ttatgctctt tgaaacagga gaaatttatt caacacatat
     1861 gacaaacaaa aagaaatagt taatttcaga attgaaagtt ttattacttt aaggaataat
     1921 ttcattgata tggaaagaat agaaccagat tctggactag aggatattca taagtttatt
     1981 acaaatgaaa ataaatcatt attaattaga gggaaatctg gtacgggtaa ggccaccctg
     2041 gctctagaaa tagcaaaaac tcactcaaac aaattcgaag taatatatat ttctagaaat
     2101 atttccgtaa ataatattta caatagattt ccatggacca aaaacctatt aaaatcatac
     2161 aatatagtgt ctatcaacac caaccctgat tttatgttat ctgaagcgtc agtcatatta
     2221 aatagtataa tgaatacact atcaaataga attcaaaaaa ttgaagatcc gtttgtacct
     2281 ttaaaggaaa aacctaggcc atttataata ttggagatat gggataactt agtaaaagaa
     2341 ctagataaca aagatatcat aagaacacaa aaaatattat cttccctaat agataaaaat
     2401 ggaggtttta tcattttttt gactgaagac atggacaata cagatcttga taatttaatc
     2461 gatggaatca ttactcttga tcaatctttt tataaatcat a
//
LOCUS       DATIAS010000535         4112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_234049, whole genome shotgun sequence.
ACCESSION   DATIAS010000535 DATIAS010000000
VERSION     DATIAS010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4112
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234049"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(821..1258)
                     /locus_tag="VLA74_10695"
     CDS             complement(821..1258)
                     /locus_tag="VLA74_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51217.1"
                     /translation="MKYKKDNNWFRRRWLDFRQGHSIYLIFIMTFANFITIQYKLLLD
                     KIPSVDVLTGGNIIGFAIVFVALYVPIGILIGYWHRKSQWRVEAEALFRENKIGATMW
                     LFVIDLIDNKVTDQEKKEMRDMLLKITKGKERIKDEKTDNEDD"
     gene            complement(1308..2717)
                     /locus_tag="VLA74_10700"
     CDS             complement(1308..2717)
                     /locus_tag="VLA74_10700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51218.1"
                     /translation="MNSINFLQIIKRDQIIFYVFFIGVITRIVPELISYPFPIGYDTI
                     NYYIPSISDIENNLDIQNLQIYPILLYFIHTIFGLNPNNSVIVLSVICYGIFSIVIYL
                     WSRKFQLSQTKGLCMVLFIIFQISVLRTGWDLHKDVLGLILFFVILYMVDDKKGYRKA
                     QIFLIFSLLTVIFFVDTMLSFLAFVSLILYFAIKRNWKYLYSIIAIGIIILITFSTIN
                     TINNYPIVSNIIKLLEGNITIDQSYSQINMVLLFLKLNILILPTFMFGLRYLKTNILY
                     IPIILILIGSFSWILLPNTDLLLADRWIILSGIFISIFSFAGMNYLLYQYRHLNSNNL
                     VFGIVVSFFVIIGLGYMILSYDQPLPIYGIFREHTDFFIPPSMQFNSIDIKDNTDLII
                     TTEWINKNTHPDTKIYGNVYLKGWMKILLKDNRTFDFKNHMWMKKGIYIGNHNEIMNI
                     NQSFTILFSKGNFDIILNQ"
     gene            complement(2756..>4112)
                     /locus_tag="VLA74_10705"
     CDS             complement(2756..>4112)
                     /locus_tag="VLA74_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSF51219.1"
                     /translation="FLFNISIMQLPEYQRTYQKNTIKSNHLYKKSDKIFPGGISHNIR
                     FFAPYPFFVKKAKGKILTDVDNNIYVDYWMGHWALILGHSPDVISRSVINQVKNGTLY
                     GTVNNSSVELAEVIQKLMPRAEKMRFASTGSEATMYAVRLARAKTMKKFVAKIIGGWH
                     GFNSTLLKSVNYPFDSKEGIGFNPEEKYIKSIPFNDLENSLKILTPLKNDLACIIVEP
                     ILAGAGCIMPEHDYLLGLQEFAKKNDIIFILDEIVTGFRVSIHGAYKMFKLEPNLFTL
                     GKIAGGGMPIGIVCGESEILSMANPTRKLNRELYCSIGGGTFSSNPVTMVSGLETLKF
                     LKRNEIDVYRKINELGNYIRTEIQKVFYENNIKAIVTGIGSLFHIHFLVNKDIKIKNA
                     NDVALCNTEMLENFHFALMAKYKIFFLPNKMGAISYVHNKTDATNLINATRSIVESRM
                     L"
BASE COUNT         1449 a          661 c          531 g         1471 t
ORIGIN      
        1 ttaacctatg atttaaaaat aattaataat tttcctcaga cacatgatgg atatggtata
       61 acagcaaaac ttatgtccat aataaaatct aattcttaag gttattttat ttacaacgct
      121 ttattcaacg ggaatatgtt atacttaaat actcaatgtt aataagtgtc ttacagtccc
      181 ttcgactatt ggaaagaacg tggaaagata tataaaaaaa ttttcgttac gataaatata
      241 aaattttaca acaagaattt cttctagatc accttcactc cctcaataac tttcattctg
      301 tattgaagtt gggatgtgga tttggccgaa tcaccaaatt attgttaact aggtattctg
      361 aaattcaaga atatttggca gtggatctat ctccccttca aatagaaaat acgaaaactt
      421 atttagattc aataattttc ttgcacaaag gacttgattt caagtatcta atatacagtc
      481 attttaatca gaaaagaaat atgatctagt aattctctct gaagtattga tgcatatatt
      541 accttctgaa atagactcgg taatcggaaa cttagtatct ttgtcaaata aacacataat
      601 caatattgat tggttcgagg aagtactagc aaaaaaattg ttccacataa ttttattcat
      661 ccttatgaac tactgtataa ggaatattct gaggtgtcat cggttcaacg gattcctatt
      721 agacgaaaaa aatattcgaa tccatcgata ccagacaatc aattttccat gttatattag
      781 aaaatatatt aaatcatctt gaataaatta ttttttattt ttaatcatcc tcgttatctg
      841 ttttttcatc ttttatcctt tcttttcctt tggttatttt tagtaacatg tctctcattt
      901 cctttttttc ctggtctgta actttattat caattagatc aattacaaat aaccacatag
      961 tagctccaat tttattctct ctgaataatg cttcggcttc taccctccat tgactctttc
     1021 tatgccaata gcctattagt attcctattg gtacatacaa agcaacgaac actattgcga
     1081 acccaataat gttaccccct gttaatacat ctacagacgg aattttatcc aatagtagtt
     1141 tgtattggat cgttataaaa tttgcgaaag tcataataaa aattaaatat atactatgtc
     1201 cttgcctaaa atctaaccaa cgtcttctaa accaattatt atctttttta tatttcaata
     1261 ctgttgttat tattttattt tagttaaatt gtttacgttg tttcatacta ttgattcaat
     1321 ataatgtcga aatttccttt tgagaataag attgtaaatg attgattaat attcataatt
     1381 tcattatggt taccaatgta aatacctttt ttcatccaca tgtggttttt aaaatcaaaa
     1441 gtcctgttgt cttttaataa aattttcatc cagcctttca agtaaacatt accatatatt
     1501 ttggtgtctg ggtgggtgtt tttatttatc cattccgttg tgattatcaa atctgtgttg
     1561 tcttttatat caatcgaatt aaattgcatt gagggaggta taaagaagtc agtatgctct
     1621 ctgaatatgc catatatggg aagtggttgg tcatatgaca gtatcatata tcctaatcct
     1681 attatcacaa agaatgaaac cacaatacca aaaaccaaat tattactatt taaatgtcta
     1741 tattgatata ataaatagtt cataccagca aaagaaaaga tcgaaataaa aataccagaa
     1801 agtataatcc atctatccgc aagtaacagg tcggtattag gtaaaagaat ccaactaaaa
     1861 gatccgatca gtatcaatat tataggaata taaagtatat ttgttttaag atatcttaat
     1921 ccgaacataa acgtcggaag tattaatatg ttcagcttta aaaacaacaa caccatatta
     1981 atttgactgt aactctggtc aattgtaata ttaccttcaa gtaatttaat aatattactt
     2041 actattggat aattattgat tgtattaatg gtagagaatg tgattaatat tattattcct
     2101 attgctatta tcgagtataa gtatttccag tttctcttta tcgcaaaata tagtattaaa
     2161 gagacaaaag ccaggaaaga taacattgta tcaacaaaaa aaataacggt taataaagaa
     2221 aaaattaaaa atatttgagc cttcctatat ccttttttat catcaaccat ataaagaata
     2281 acaaaaaata aaatcaaacc aagaacatcc ttatgtaaat cccatcctgt tctcaatact
     2341 gatatttgga atataataaa taaaaccata caaagtcctt tagtttgaga aagttgaaat
     2401 tttcgagacc acaagtaaat aactatcgag aaaataccat aacatataac cgataagaca
     2461 ataacagaat tatttgggtt taaaccgaaa atagtatgaa taaagtagag cagaattgga
     2521 taaatttgca aattttggat atccaagtta ttttcaatgt cagaaatcga aggaatatag
     2581 taattaattg tatcatatcc tataggaaaa ggatatgaaa tcaattcagg aacaattcta
     2641 gtaataactc caataaaaaa tacgtaaaaa ataatctggt ctctctttat gatttggaga
     2701 aaattaatgg aattcactcg aatgattata ataatacttt tcgctatacg caattttata
     2761 acattctaga ttcaacaatt gatctggtag cattaattag atttgttgca tcagttttat
     2821 tatgtacgta tgaaatggct cccattttat taggtaaaaa gaatattttg tattttgcca
     2881 ttaacgcaaa atgaaaattt tcaagcatct ctgtattaca taaagcaaca tcattggcat
     2941 tttttatctt tatatcctta ttaaccaaaa aatgtatatg aaataatgac cctattccag
     3001 taacaatcgc ttttatatta ttctcgtaga aaactttctg aatttcagtt cgtatataat
     3061 tgcctaactc atttattttt ctataaacat ctatttcatt tctctttaga aattttaatg
     3121 tctctaaacc tgaaaccatg gtaacaggat ttgatgaaaa ggttcctccc ccaattgagc
     3181 aatacaattc tctattcaat ttccttgtag ggttagccat tgataaaatt tcactttcac
     3241 cacaaactat tccaataggc atacctcctc cagctatttt tcctaatgtg aacaaatttg
     3301 gttccaattt aaacatctta taagctccat ggatcgatac tctgaagcca gtaacaattt
     3361 catctaatat gaaaataata tcattcttct tagcgaattc ctgcaggcct aataaatagt
     3421 catgttctgg cattatacat ccagctcctg caagaattgg ttccacgata atacaagcta
     3481 gatcattctt tagaggagtt aaaattttta aggaattttc aagatcatta aatggtatgg
     3541 atttaatgta tttttcttcc ggattaaatc caattccttc ttttgaatcg aatggataat
     3601 ttacactttt taaaagagtt gaattaaaac catgccatcc accaataatt tttgctacaa
     3661 atttcttcat agtctttgca cgagccaacc ggacagcata cattgtagcc tcagagccag
     3721 ttgaagcaaa tctcatcttt tctgctcttg gcattaattt ttgaatcact tcagctaatt
     3781 caacacttga attatttaca gttccatata atgtgccatt ctttacttga tttatgactg
     3841 atcttgaaat gacatcaggt gaatgcccca atatcaacgc ccaatggccc atccaataat
     3901 ctacatagat attattgtct acatccgtga gaatttttcc cttagctttt tttacaaaaa
     3961 aaggataggg agcgaaaaac ctaatattat gactaattcc cccaggaaaa attttatcag
     4021 attttttata aagatgattt gactttatag tatttttttg atatgttcgt tgatattcag
     4081 gtaattgcat tattgagatg ttgaaaagaa at
//
LOCUS       DATIAS010000536         2528 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1051111, whole genome shotgun sequence.
ACCESSION   DATIAS010000536 DATIAS010000000
VERSION     DATIAS010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1051111"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(855..1823)
                     /locus_tag="VLA74_10710"
     CDS             complement(855..1823)
                     /locus_tag="VLA74_10710"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51220.1"
                     /translation="MIIPTTAIMLTTTSNPVYGQQDKTNFNVTDSSNIQSIPAKKVQV
                     GDIEIAYKMLGKGDPILLFNGASDVMDGWDPSFLKGLSSNHTVIAFDSRGLGNTTMGS
                     KPYSMQQLADDAAGLLDALKIPKADVMGYSLGSFLAQQFTMMYPDKVNTLTLVASSCG
                     GKDHTPKPPEFIKLQSEIVNKSLNNVSISQEEMKELVSASVGSGWIRLHPEVLENIPT
                     MQQAKPGLSPEAMNNQNNVGKEWVATNWSGACDELAKLAKPTLVITGIDDNMYVPYVN
                     SLKIVEKIPGAWLVQIKNAGHAVMDQYPEEMGKIMNTFLSTTAQSN"
BASE COUNT          871 a          395 c          376 g          886 t
ORIGIN      
        1 taattttgaa aattcaaagt aacgttaatt gatttgtaat caaatgacta taaaaagtaa
       61 aggttaattc ttagtttaat cattattgct ttatgaattc ttctaaaaat aggattggaa
      121 cccagagttc aatggggcca gtggttcccg ttgtgatatt ggtactaaaa atggactcat
      181 aatattaaat aaaaatcgaa taaataaaca ttatgtattt gatctaaatc ttatatgtat
      241 tacttcttta cattaaataa atatataatc tctaatacaa aattccattc attagctttt
      301 agcaacaaat ctcctgtagc aactacttca atacggtagt aaagtgtacg agttctttca
      361 gttaatggag gtagtattgc aaaccaatca tgcgaagcag taggaaaagt tccaggttta
      421 gcatataatc cactagtaat aaatcgactg ttcgatatag taattattct taagtatcat
      481 caagcttgta ttgtagaata taaaaaacca aaaacatagt tatccaattt ctatacctgt
      541 ctgacggtaa aaaaatattt caaaagtatt aatatattaa caaattctca ttattatatt
      601 gattcagcaa aatattaagg attagcaaca tttttgtatc tttcacagtg tgatttgaac
      661 cattttaaaa gtgggaccag aggtttatga attgtttttg acacaatgtt tttggccaaa
      721 aataggacaa taaacataat gggattcgaa cccacaaaag atacctgttt cttttattat
      781 tgaatctaat ttacttagtt attccaagaa tacactcatc atactattac tactagatca
      841 taataaatat attattagtt ggattgggct gttgtcgata aaaatgtatt cattatttta
      901 cccatctctt ccggatattg atccattact gcatgacccg catttttgat ctgtacaagc
      961 caggctcctg gaatcttttc tacaatcttt aacgaattaa catacggcac gtacatatta
     1021 tcatcgattc cagttatgac caaagtaggt ttggctaatt tcgcaagctc atcacaagca
     1081 ccactccagt tggttgccac ccattccttt cctacgttat tctgattatt cattgcttca
     1141 ggggaaagcc caggcttagc ttgctgcata gttggaatgt tctcaaggac ttcaggatgc
     1201 agtctaatcc atccagatcc tactgaagca gatacaagct ctttcatctc ttcctgagaa
     1261 atagaaacat tatttagaga tttgtttaca atttcggatt gcaattttat aaactcaggt
     1321 ggtttaggtg tatgatcttt tccgccacat gatgaagcaa caagtgtaag agtattaacc
     1381 ttatctggat acatcattgt aaactgttgg gccagaaatg atccaagaga atatcccata
     1441 acatctgctt ttggtatttt cagagcatca agcagaccag ctgcatcgtc tgctagttgc
     1501 tgcatagaat atggtttgga acccattgtt gtatttccaa gtccacgact atcaaacgca
     1561 attactgtgt gatttgaaga aagacctttt agaaaggacg ggtcccagcc atccataaca
     1621 tcagaagcgc cattgaaaag taaaataggg tcaccttttc ctaacatttt gtatgcaatt
     1681 tcaatatcgc caacctgaac tttttttgca ggaatacttt gtatgtttga tgaatctgtt
     1741 acattgaaat ttgtcttatc ttgttgacca taaacaggat tgctagtagt agtcaacata
     1801 atagcagtgg tagggattat cattataaac atgaaaataa tgatgaaaac tgaagtttta
     1861 tttccattaa tttttggtag ataatacatt ttgttatatg caatggggag acatctactt
     1921 attattaatc ttacgtcttg ttatcacata taatattcag aagatgatac caaggatatt
     1981 aatacaacaa ctattttatt gaaaaacata tcactagaat taatgaaata ctttacaaga
     2041 ttttaaaaaa aatgttttat cagttatttc aaattcaatt aagtcaaaga atttcttcag
     2101 tcttatccca taatcttttt tagtaactct gctttaatgc atatttagaa tattatataa
     2161 gatgtcaatt ctttattgtg tcttttgtga gacaattttt gtaataacat cattatctaa
     2221 tattagttat tattaatata ccaatagata aaaacaaaat atttatatac tatggggcca
     2281 gtggttcccg ttgtgatatt ggtactaaaa ctggactcat aatctataaa aagaaagaat
     2341 taattaagtg ttactagaag aatttctgtt tttattaaca ttgaataatg ttttgtttta
     2401 aactttttga attcttttaa ttgctttata atttggagaa aataataata tcatacataa
     2461 taaatagtga acccctttaa ctaatgtacc aagcagatat gaatcctaat aaacaatgac
     2521 aataaata
//
LOCUS       DATIAS010000537         3078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1051409, whole genome shotgun sequence.
ACCESSION   DATIAS010000537 DATIAS010000000
VERSION     DATIAS010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3078
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1051409"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1128
                     /locus_tag="VLA74_10715"
     CDS             <1..1128
                     /locus_tag="VLA74_10715"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HSF51221.1"
                     /translation="INNKRILKDLAKISDEYEIIVYKLLSQKKLYPNNGNKSDPAHPA
                     IHPTGRKPSRLTSQEFKVYDLIVKRYFSTFGESTIHSKTTIYVTVNKEHVFYITDYVV
                     SKKGWIDFYVPYNNMSKHSYHLPKLKVGDKLKNIKIIREEKFSEPPKRFNYSSLLSKM
                     EKEEIGTKSTRANIIDSLIKRNYIEVKKNILFPTKLGMILIDYLQKKSPMILSTNLTR
                     MLEKYLREIELGVRDYSNILDDVINDILLSIHNYKKNDLEIDSSTINMLKNQTENYYK
                     KRNNIVVGPCPLCRKGNLQIIRSRKTRKRFISCSNYFNEGCSITLPLPQKGIIKSTTK
                     SCSSCNWSVIHIFYYTLRLTKSLCININCPNKKKQVSNQIG"
     gene            complement(1112..1942)
                     /locus_tag="VLA74_10720"
     CDS             complement(1112..1942)
                     /locus_tag="VLA74_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HSF51222.1"
                     /translation="MKSKMIVAIVQMKSSTDKNENLETSVRFIEEAARKNADYIFFPE
                     FQMAFTPSNQNLDELYSVAESISNSNFLKKLRQESKRYNIGIVGTMFEKNKNKTEKRV
                     FDTAFVINKNGKVISIYRKLHLYDAFGFKESTKFINGDKITKPCKTIFGKMGVMICYD
                     LRFPELARILALEGSDIMAIPSGWVNGVMKEEHWITMLKARAIENGNYIIAANQVGNI
                     FCGRSLVVDPLGSVLTDLGDKIGLEVVEINKQRINQVRDILPLLRNRREDVYRISQSD
                     "
     gene            2319..2486
                     /locus_tag="VLA74_10725"
     CDS             2319..2486
                     /locus_tag="VLA74_10725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51223.1"
                     /translation="MTVLRLPKKAQYLNPNERQVNQKIKSDVRANRFYTNIKKEKDAV
                     SGYLNKRFGRC"
     gene            2627..3034
                     /locus_tag="VLA74_10730"
     CDS             2627..3034
                     /locus_tag="VLA74_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51224.1"
                     /translation="MINSKLTFYTLSSGSLMVVLLLPLYNINAQEENEKNNSLTILSN
                     IRNLLDKAITELNSGNYTGASELVDIAYIDNYEYIEDPLKDLDKDLMEETEVMIREDF
                     AGAIEDKKALDEITILHNNIKSNLDMAEKLFKQ"
BASE COUNT         1160 a          471 c          400 g         1047 t
ORIGIN      
        1 atcaacaata aaaggatatt aaaggatctt gctaagatat ctgatgaata cgaaatcatt
       61 gtctataaat tactatcaca aaagaaatta tacccaaaca atggtaataa gagtgatcca
      121 gcccatcctg caattcatcc aactggcaga aagccctcac gcttaacatc tcaagaattt
      181 aaggtttatg atcttattgt taaaagatat ttttcaacat ttggtgaatc aacaattcat
      241 tcaaaaacta caatttatgt aactgtcaat aaagaacatg tattctatat aactgattat
      301 gttgtttcta aaaaaggttg gattgatttt tatgttcctt ataacaatat gtctaaacat
      361 tcttatcatt tacctaaact aaaagttgga gataaattga aaaatatcaa aataataagg
      421 gaagaaaaat tcagcgaacc tcctaagcgt ttcaattatt cttctttatt gtccaaaatg
      481 gaaaaggaag aaataggaac caaatctaca agagctaata taatagattc actcatcaag
      541 agaaattaca tcgaagtaaa aaaaaatatc ctttttccta ccaaacttgg aatgatatta
      601 attgactatt tacaaaaaaa atctccaatg atactttcaa ctaatctaac tagaatgcta
      661 gaaaaatatt tacgagagat tgagctggga gttagagact attcgaacat tttagatgat
      721 gtcataaacg atattttact atctattcat aattataaaa aaaatgattt agaaatagac
      781 tcttctacca tcaatatgtt aaaaaatcaa actgaaaact attataaaaa aagaaataat
      841 atcgtagtag gaccatgtcc tctttgtcga aaaggaaatc tgcaaataat aagatcaaga
      901 aaaactagaa aaagattcat atcatgttcc aattatttta atgaaggatg tagtataacc
      961 ttgcctctgc ctcaaaaagg tataattaaa tctactacta aatcttgttc gtcttgtaat
     1021 tggtcagtta tccatatttt ttattacact cttagattaa caaaatctct ttgcataaat
     1081 attaattgtc caaataaaaa gaaacaggta tctaatcaga ttggctgatc ctgtaaacat
     1141 cttctctcct atttcttaat aatggcaaaa tatctctgac ttgatttatt ctttgtttgt
     1201 tgatttctac tacctctaat ccaattttat ctcccaagtc ggtcaataca gaacctaatg
     1261 gatctactac caaacttctt ccacaaaaaa tatttccaac ctgatttgct gcaataatat
     1321 agttaccatt ttctatagca cgcgctttaa gcatagtaat ccaatgttcc tctttcataa
     1381 caccatttac ccatccagaa ggaattgcca tgatatctga tccttctaat gccagtattc
     1441 ttgctagttc tggaaatctt aagtcatagc atatcattac tcccattttt ccaaaaatgg
     1501 ttttacaggg tttcgtaatt ttgtcaccgt taataaattt agtagattct ttaaacccaa
     1561 aagcgtcata tagatgtaat tttctgtata tcgagattac ttttccattt ttatttatta
     1621 caaatgcagt atcaaaaacc cttttctctg tcttgttttt atttttttca aacatcgtac
     1681 cgactattcc aatattgtat cgttttgact cttgacgaag cttctttaaa aaattactat
     1741 tagaaatcga ttcagccact gaatacaatt catctaaatt ttgattacta ggagtaaatg
     1801 ccatttgaaa ttctgggaag aaaatataat cagcattttt tcttgccgct tcttcgataa
     1861 atctaacaga ggtttccaaa ttttcatttt tatccgtcga tgatttcatt tgaacaattg
     1921 caacaatcat tttcgacttc atctttatta ttaacagatt tctacaatat tatttttttt
     1981 tttgaatatt tttattgctg tttagatgtg ttttttaata aactagattt tgctttgaat
     2041 accatattct atcaaatgat taaatttatc agaattagaa aatccccctt attgtaatgc
     2101 actctatact tttttaggca atttcaaaga taaagcagca tgttttgata attagttagc
     2161 gtatttggat acatacgcta taatttcatt tgctgacata tctaatcaag atccatgtaa
     2221 tgaaaaatag gtggaaaaag cttgtactgg tatgggataa ctcttcattt cacataaaca
     2281 agatgacata agaatatgta aatgcgcaga aatacagatt gactgtatta cgccttccaa
     2341 agaaagctca atatctgaat ccaaatgaaa gacaagtaaa tcagaaaata aaatcagatg
     2401 tacgtgcaaa cagattctat accaatataa aaaaagaaaa agatgcagta tcaggatatc
     2461 taaataagag atttggaaga tgttagaatg actttaatga taatacttga gttgtacata
     2521 aattttatca gttaccttga ttagtagatg gatatacaaa tattattttc aagaacgaga
     2581 aacgaataat aatatatata attaaatttt catttaaaaa acggcaatga taaattcaaa
     2641 gctaactttc tataccctta gttcaggaag tttaatggta gttttattat tacccttata
     2701 caatattaat gcacaagagg aaaatgaaaa gaacaattcc ttaaccattt tatccaatat
     2761 cagaaatcta ctagacaagg caataacaga attaaattca ggaaattata caggtgcatc
     2821 tgaattagtc gatattgcat atatcgacaa ttatgaatat attgaagatc cattaaaaga
     2881 ccttgataaa gatctaatgg aagaaacaga agtaatgata agagaagatt ttgcaggtgc
     2941 tattgaggac aaaaaggctt tggacgaaat tactatatta cataataata taaaatctaa
     3001 cttagacatg gcagaaaaat tatttaaaca gtaatttcat tttttattta attggtatta
     3061 tcaaatttag aataaata
//
LOCUS       DATIAS010000538         2871 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2005809, whole genome shotgun sequence.
ACCESSION   DATIAS010000538 DATIAS010000000
VERSION     DATIAS010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2005809"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..1124
                     /locus_tag="VLA74_10735"
     CDS             330..1124
                     /locus_tag="VLA74_10735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51225.1"
                     /translation="MKRAGTSERYQNNNLKAITAYSKFLGPSISLYQIKSKNQVISFL
                     DTKIKNSEDPDKRWITTWNDYLIRIKYFFRWLYNCNDRELDEDIPFSEWITPDFVQIR
                     KKKTKRISPYLENELWEREDLLTIIKYESYKRNKAILTLLWDLDARPHEITLLKIKHI
                     RLKEKYGEGEIPYEAKTGTGPILLTTSFPYVRDWLNEHPYKNEPNSRLICNLINGAPI
                     TPDNIDKVMKQLRERIIRLLENGEITNIEERSWNIYSKQRNGIHIV"
     gene            1196..1579
                     /locus_tag="VLA74_10740"
     CDS             1196..1579
                     /locus_tag="VLA74_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51226.1"
                     /translation="MNSRQGSRYIKRRMGDELKNEILVRNGIIQETEINSKPSVLNCH
                     RCQLVNAIENKYCSKCSYPLTPQAFEEIKTEEDKRMRILEEKQKEKESEIQTMKQQIA
                     LLIESQKEIIECLKYPNKLLMISEG"
     gene            complement(1621..2520)
                     /locus_tag="VLA74_10745"
     CDS             complement(1621..2520)
                     /locus_tag="VLA74_10745"
                     /inference="COORDINATES: protein motif:HMM:NF024172.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HSF51227.1"
                     /translation="MNNYGLDKLTSSEKKSIAFFSNLRWNGKIICPRCGNNSLYYLKA
                     SRYGCKNCRYNFSEFTGTYLSKLKVKPDLVRYLLNKFISGIPAYRIRPHKKYGKCDIS
                     TRERTYRLFRQTIYDSSLEDIQNLKLSGEIEVNEELFDNHNKVGIFGWGSVKQQNLVF
                     GIYYKNEKIVTFPITDRKYEELVRQVPFIKNDRDIGSLYYYDEQPVYAILNMKKKCQL
                     VGGNDYEKGIPITTIPQKNFNVLIRIEEFWYEIKNWLYHYKGVPKKYFPLYLKEIEFR
                     FNNRFKDNIFHELSQLLVNSSCM"
     gene            2631..2747
                     /locus_tag="VLA74_10750"
     CDS             2631..2747
                     /locus_tag="VLA74_10750"
                     /inference="COORDINATES: protein motif:HMM:NF014723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin VapB family protein"
                     /protein_id="HSF51228.1"
                     /translation="MKYKQILVSDENYRKLKGLGGAGDSFNDVITEMLRKIE"
BASE COUNT         1097 a          419 c          439 g          916 t
ORIGIN      
        1 taaagataat attaaatatg actaccattg ataaagctaa aataatttta aaattttaat
       61 cattgttaac aataaaattt tacatctagt ttctaataat aaaagccaaa agaaggtagt
      121 aatagagccc tagtatatcc aggactctac tcccgacggg cccgttatgt attcgggttc
      181 atatacatgt tttaagaata caataagcat agaaaagaag aggaggctca agaaagacga
      241 cagttaaact atctacaaca attaaaaata ttgaaagaga tgttctcaat ccagagaata
      301 aaaaattaat tgaacaattc tatgaattta tgaaaagagc tggcacttcg gaaagatatc
      361 aaaacaataa cttgaaagca attacggcat atagtaaatt tctcgggcca tcaatttcac
      421 tctatcagat aaaaagtaaa aaccaagtta tttcattttt ggatacaaag ataaagaata
      481 gtgaagaccc agataaacgt tggattacaa cttggaatga ttatctgata agaatcaaat
      541 actttttcag atggttatac aattgtaatg atagagaact tgatgaagat attccatttt
      601 cagaatggat aactcctgat tttgtacaga taagaaaaaa gaagacaaaa agaattagcc
      661 cctatcttga aaatgaatta tgggaaagag aagatttatt gaccataata aagtatgaat
      721 cttacaagag aaataaagct attcttacat tactttggga cttggatgca cgaccgcatg
      781 aaattacatt attaaaaatt aaacatatac gtctaaaaga aaaatatgga gaaggtgaaa
      841 taccatatga agcaaaaaca ggaacaggtc ctatactact tactacatca tttccatatg
      901 tcagagattg gttaaatgaa catccatata aaaatgaacc aaattcaaga ctaatttgta
      961 atctaattaa tggcgcacca ataactcctg ataatataga taaagtaatg aaacaattac
     1021 gtgagagaat aatccgattg ttagaaaatg gagaaattac taacatagag gagagaagct
     1081 ggaatattta ctcaaaacaa agaaatggaa tccatattgt ataagacata gcgctataac
     1141 ttcagattca gattatttac cagaatatgc cttaaagaaa aaagttagat ggtctatgaa
     1201 ttcaagacag ggttcacgat atataaagag aagaatggga gatgaactaa aaaatgagat
     1261 tcttgttaga aatggtatta ttcaagaaac tgaaataaat tctaagcctt ctgtacttaa
     1321 ttgtcatcgt tgtcaattag tcaatgcaat tgaaaacaaa tattgttcaa aatgtagtta
     1381 tccactcact ccacaagcat ttgaagagat caagacagaa gaagataaaa gaatgagaat
     1441 attagaagaa aaacaaaagg aaaaagaatc tgaaatacaa actatgaaac aacaaattgc
     1501 tctgttgata gagtcacaaa aagaaatcat cgagtgtcta aaatatccaa acaaattatt
     1561 gatgatctca gagggatgaa taaaataaag agtatctcaa aattatttat tacctagaat
     1621 ctacatacag gatgagttca ccaataattg tgataactca tggaaaatat tatccttaaa
     1681 cctgttgtta aacctgaatt ctatttcctt tagatatagt gggaaatact ttttgggtac
     1741 tcctttataa tgatataacc aattcttaat ttcataccag aattcttcaa ttcgtattaa
     1801 tacgttaaag ttcttttgtg gtatagtcgt tataggaata cctttctcat agtcatttcc
     1861 tccaaccagt tgacattttt ttttcatatt taatatagca tatactggtt gttcatcata
     1921 atagtataaa gatcctatat ctctatcatt ttttataaat ggaacttgac ggactaattc
     1981 ttcatatttt ctgtctgtaa taggaaaagt aactatcttc tcattcttat agtatattcc
     2041 aaagaccaga ttttgttgtt taactgaacc ccatccgaat atcccaacct tattatgatt
     2101 atcaaataat tcttcattaa cttctatctc tccagatagt ttcagatttt gaatatcttc
     2161 taatgatgaa tcgtaaattg tttgtctgaa taatcgatat gttctttctc ttgttgatat
     2221 atcacatttt ccatattttt tatgaggcct aattcgatat gcaggtattc cagatataaa
     2281 tttgttgaga agatacctta caagatcggg ttttaccttt agtttagaca aatacgttcc
     2341 agtaaactca ctaaaattat atctacagtt tttgcatcca tatcggcttg ctttcagata
     2401 atataatgaa ttgtttccac atctaggaca tattattttt ccattccatc tgagattgct
     2461 aaaaaatgct atacttttct tctcacttga tgttaatttg tctagtccgt agttattcat
     2521 gaattagttg aaataggaca attagagctt ttattctttg ctccaaatgt acaggttagt
     2581 aaaagtccaa atgaggtctt ttatatcact aatataatta ttatcgatgt atgaaataca
     2641 agcaaattct tgtatcagat gaaaattata gaaaattaaa aggattagga ggagcaggcg
     2701 attcttttaa tgatgttata acggagatgt taaggaaaat tgaatagttt acaacaatcc
     2761 cttggagttc ccgcccctga gattgttgta aacggtgagc aaacctacac taaggtggtg
     2821 gaggattgcc aatgaataat tcagcaatct caaatttaaa caattcttct a
//
LOCUS       DATIAS010000539         3454 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_506623, whole genome shotgun sequence.
ACCESSION   DATIAS010000539 DATIAS010000000
VERSION     DATIAS010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3454
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506623"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..553)
                     /locus_tag="VLA74_10755"
     CDS             complement(29..553)
                     /locus_tag="VLA74_10755"
                     /inference="COORDINATES: protein motif:HMM:NF018580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1264 domain-containing protein"
                     /protein_id="HSF51229.1"
                     /translation="MIRYYTYTAIILSVLGVSLALIAGEIEFDTKVFAQPQPPETSPN
                     ATNPVVKAGPLTAVRHIFDDPTLRVWHYCTPHHSIMAICTLFDTNQKNSTLIGIEYMI
                     TPEDYKQLPEREKPYWHYHVTEFAPNRADPHFPMLSAEDEKKVLKMIEDSYGKVILTG
                     ILMINYLHSHHKFL"
     gene            complement(815..1021)
                     /locus_tag="VLA74_10760"
     CDS             complement(815..1021)
                     /locus_tag="VLA74_10760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51230.1"
                     /translation="MIKNYPLKIKSNSSNTVNQNLTLVGGGGDLAGSASVKAGWNDNN
                     KVNVKLQGSGPLYNLEGIHLHLFP"
     gene            complement(1067..1195)
                     /locus_tag="VLA74_10765"
     CDS             complement(1067..1195)
                     /locus_tag="VLA74_10765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51231.1"
                     /translation="MTGNDMTKNNSTAMQTGQQMKGMDMEQMMKTMPHIILNPLII"
     gene            complement(1451..2443)
                     /locus_tag="VLA74_10770"
     CDS             complement(1451..2443)
                     /locus_tag="VLA74_10770"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF51232.1"
                     /translation="MTFQKSTTHIVLITILTLIMTTCIASIYFQDLNAQYYSNDDNNI
                     KLEPIRHMMDHRRHMMMEDGQQQQESSVSNFSMTKNNKTANGADGNNIIYASIVIGAI
                     SRTTDAYEPNPIYVKEGQMVIWTNNDYIVHTVTQGPLSVGIDTALRFDSGILLRGYSF
                     SHLFDKEGTYNYYCTIHPWMVGKVIVVTNSTTITASNTNNQSAAPISMLERGDVAMGF
                     NQSKISHQFKSTPTGGEIMITALNSSDIETIKQIKNHISLIQKEFSAGNFTKPFYIHA
                     QDVPGTKLMTEKKNFIKYSINEIDNGSTLILETTDKELIDAIHQFMAFQRTEHN"
     gene            complement(2679..2873)
                     /locus_tag="VLA74_10775"
     CDS             complement(2679..2873)
                     /locus_tag="VLA74_10775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51233.1"
                     /translation="MKENKITQTNYYSLSTTRIQPSFNDNMSNNFTTAHDLLVDKFQL
                     NFYYLKEKEDRVAIGDNLFY"
     gene            3143..>3454
                     /locus_tag="VLA74_10780"
     CDS             3143..>3454
                     /locus_tag="VLA74_10780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51234.1"
                     /translation="MKKQFNIVVIIALTSILSFGIISNYNYDDGILLIDAQIIDSDNN
                     TSNTNIFKLENIPTKQVRVGDIDISYKTFGKGDPILLIMGYAGSKNDWDQTFLKGLST
                     NH"
BASE COUNT         1151 a          483 c          538 g         1282 t
ORIGIN      
        1 gatttattga ccatatcagg gtgttggact ataggaactt gtggtgggaa tgcaggtaat
       61 ttatcattag gattccagtt agaatcactt taccatatga atcctctatc atttttaata
      121 cttttttctc atcttctgct gatagcatag gaaagtgagg atcggctcta tttggagcga
      181 attctgttac atgataatgc caatatggtt tttctctttc tggaagttgt ttataatcct
      241 caggtgtaat catgtactct attcctatca gggtagaatt cttttgatta gtatcaaata
      301 atgtacatat agccattata ctgtgatgag gagtacaata atgccaaact ctcaaagtag
      361 gatcatcaaa tatgtgtctg acggcggtta atggacctgc tttgactact gggtttgttg
      421 cattaggaga tgtttctggt ggttgtggct gtgcaaatac tttggtatcg aattctattt
      481 ctcctgctat caaggctaat gaaaccccta aaacactcaa aatgattgca gtatacgtgt
      541 aataccttat cattaattta atttttaaat tgtcatattt atacaattgt attaatttgt
      601 gttcgttggt acactaacac aatattttat ttgaaaataa aaataagtga tgatggatct
      661 accgttgact tcgactacca tcacatctac aatcaataaa aacatataat aatattttta
      721 gaaggtaaaa ttccattttt cgaatatgga taaaattaaa acatatagaa aaaaaattta
      781 gtttgatata aatgaaaaat ggctttattt tttattatgg aaatagatgt aaatgtatac
      841 cttctaaatt gtaaagtggt ccgctgccct gtaacttaac attaactttg ttattatcgt
      901 tccatcctgc ttttactgat gcagaccctg ctaaatctcc tccacctcct actaatgtta
      961 gattttggtt aaccgtgtta gatgaattac ttttaatttt taacggataa ttctttatca
     1021 tttactatat caattcctga aatttgtatt ccgttgactg aactcatcag atgataagtg
     1081 gatttagaat aatgtgaggc attgtcttca tcatttgttc catgtccatt cctttcattt
     1141 gttgaccagt ttgcattgct gtggaattat tcttagtcat atcgttccca gtcatttgca
     1201 tctgagaaaa tacttcatta ttagttccaa aatgtgttga ataccaatcc caaaagaaga
     1261 attcctgaga gagtcaatag cagatatctg aaacttaatt tctatttcat aaattataaa
     1321 gatattcgag tgtttatatc tttatttata attaatttaa gcaattttac cttaggaatg
     1381 aaaagtgaaa aaaataatag tgaaaaatag ggccttcttt tctcaaattt taaattatct
     1441 ataattaatg tcagttatgt tcagtacgtt gaaatgccat aaattgatgt attgcatcaa
     1501 ttaattcttt atctgtagtt tccagtatta atgttgagcc attatctatt tcatttatac
     1561 tatattttat aaagttcttt ttttcagtca ttagtttagt acctggaaca tcttgtgcat
     1621 gtatatagaa aggcttagta aagtttcctg ctgagaattc cttttggata agcgaaatat
     1681 gatttttgat ttgttttatt gtctctatat cactactatt taatgcagtt atcatgattt
     1741 cacctcctgt aggagtggac ttaaactgat gtgatatttt gctttgatta aaacccattg
     1801 ctacatcccc cctttctagc attgatattg gtgcagctga ttggttattg gtattggatg
     1861 ctgtgatagt tgttgagttt gttactacga tcactttacc taccatccag ggatgaatag
     1921 tacaataata attataagtt ccctctttat caaataggtg cgaaaaagag taacctctta
     1981 aaagtatgcc agaatcaaat cttaaagcgg tgtctatacc tacagataga ggtccttgcg
     2041 ttacagtatg tacaatataa tcattgttag tccatattac catctgacct tctttaacat
     2101 atataggatt tggttcataa gcatcagttg tacgtgagat tgctcctata actattgatg
     2161 catatattat gttattgcca tcagcaccat ttgctgtttt attatttttt gtcatagaaa
     2221 aattacttac ggaactttct tgctgttgtt gtccatcctc catcatcata tgacgcctgt
     2281 gatccatcat atgcctaatt ggctctaatt taatattatt atcatcattg ctataatatt
     2341 gagcatttaa atcctgaaag taaattgatg ctatacaagt tgtcataatt aaagttagga
     2401 tagtaatcaa gacaatatga gtagttgatt tctgaaaagt cattgttact attataacta
     2461 tgctattatt atttattttt atatttcact ttcagaaact tgcaaaaata tccgattaaa
     2521 gtcagttatt aggactactt gtattaataa ttaaaattat ttaaatgaat aatacagtat
     2581 attttattga tacatttaag tggcaagaat tagcgagaaa gataaaaatg gataaatgac
     2641 tttgaacaat agtatcgcaa actaaatcag agaagggttt aataaaataa attatcacct
     2701 attgctactc tatcttcttt ttcttttaag tagtaaaagt tcaattgaaa tttatcaact
     2761 aaaagatcat gtgctgtagt aaagttatta gacatattat cattgaaaga aggttggatt
     2821 ctagtagtag aaagagaata ataattagtt tgagttattt tgttttcttt caatctgcta
     2881 aatgaaagaa aatttatagt attataaatt caatagcgat cgttgaagag agggagagat
     2941 agtaaataaa attcttctat taacaatatt aaatattata atagtcatta aacaaatatt
     3001 ctactgcaat aaatgccaaa ggggaacaaa attcaacaga atcattgacg atatctttat
     3061 tattgatact acagaaaggg aagattttac gtttatggaa ggaataaaaa tttaaattgt
     3121 atgaacaaat gatctgatta agatgaaaaa acaattcaat attgtagtaa ttattgcttt
     3181 aacaagtatt cttagttttg gaattattag taattataat tatgacgacg gcatactttt
     3241 aattgatgct cagattatag attcagacaa taatactagt aatactaata tcttcaaatt
     3301 agagaacatt ccaaccaaac aagttagagt tggagatata gatatttctt ataaaacctt
     3361 tggcaaagga gatccaattt tattgataat gggttatgca ggttcaaaga atgattggga
     3421 tcaaactttt ttgaaaggat tatctacaaa tcac
//
LOCUS       DATIAS010000540         2390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1594775, whole genome shotgun sequence.
ACCESSION   DATIAS010000540 DATIAS010000000
VERSION     DATIAS010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1594775"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /locus_tag="VLA74_10785"
     CDS             <1..604
                     /locus_tag="VLA74_10785"
                     /EC_number="6.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="diphthine--ammonia ligase"
                     /protein_id="HSF51235.1"
                     /translation="CLITLYPSNEESLLFHFPNTGVPKLQAQAMNIPIIEGNIPINNL
                     DDEIKSLDHLVKIAKAEYKIEGLINGGLFSNFQKNIFNNISKDNNLILYSPLWGADQF
                     SYMKELLIHKFFILIVGVSAMGLDEAWLGTIIDQDKLEKLFLLSKKYGFNVAFEGGEA
                     ETLVIDCPIYEKRLQILNSTTKWDGQRGIIEITDIVLMDK"
     gene            606..1973
                     /locus_tag="VLA74_10790"
     CDS             606..1973
                     /locus_tag="VLA74_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HSF51236.1"
                     /translation="MFDNLRTGLRSALKKIVGASDINEELIDSLSKDIQRSLLQSDIN
                     VKLVLSITKNLKERALNEQSPKGLSRKDHIITILYNEIASLLGYSGTSITNIEKSYSD
                     EKESLNFKPGKKNIILMLGIQGSGKTTCTVKLARWLTRHGYKTAIIGADTWRPGALTQ
                     LKMNSIKIKVEVYGEEDNKNPVSIVRNGLEYYNNLDYDVIIIDTAGRHKEESGLLQEM
                     NDMYNVINPDIVILVIDGTIGQQAYNQAEAFHNAAPVGGILITKLDGTAKGGGALAAS
                     AATGAKIMFIGTGERIDDLELFSPTRFVGRILGMGDIKALLEMAKSLELEADANQAKR
                     LLGGRMTIEDFYSQMENVSKMGFRNVMENLPGLSGMVKDEQLDNLQTKIEKWRFVIQS
                     MTKEEKKDPNVINDSRRKRISRGSGIMEHDVKEMIKQYNNSKSMMKQAKGRQMHGMLR
                     RFGLG"
     gene            2012..>2390
                     /locus_tag="VLA74_10795"
     CDS             2012..>2390
                     /locus_tag="VLA74_10795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51237.1"
                     /translation="MKQSENIINNFYTLCDYCLKRNNAAKILFGKYGMLRDHKATSTD
                     NSASKCFICRGLFDLVEEIVKEITFLVSVKNKYEFDSYSLGTSLPAYLFDNEDHFRSL
                     FQLRGEENIKSAFNHAVRNKFEKV"
BASE COUNT          897 a          305 c          474 g          714 t
ORIGIN      
        1 atgtttgatt acattatatc catctaatga agaaagtctt ctatttcact tcccaaatac
       61 aggggttcct aaattgcaag ctcaagctat gaatataccc attattgaag gtaacattcc
      121 gattaacaat ttagatgatg aaataaaatc tctagatcat ttggtaaaaa ttgcaaaggc
      181 agaatacaag atcgaaggat taatcaatgg aggattgttc tcaaattttc aaaaaaatat
      241 ttttaataat atttctaaag ataataattt gatactttat tctccactat ggggagctga
      301 ccaattttca tatatgaagg aactactcat tcataaattc ttcatactca tagttggtgt
      361 ctctgcaatg gggcttgacg aggcttggtt gggcaccatt atagatcaag ataaacttga
      421 aaagttattt ttgttaagca agaaatatgg gtttaatgtt gcatttgaag gaggggaagc
      481 agaaacactt gtaattgact gtcctatcta tgaaaagaga ttacaaattc ttaattcaac
      541 gactaaatgg gatggacaaa gaggtataat agaaataacg gatattgtat taatggataa
      601 gtaaaatgtt tgataatcta cggaccggat taagaagcgc tctcaagaaa atagtaggag
      661 catcggatat aaatgaagaa ttgattgatt ctctctctaa ggatatccaa agatcattat
      721 tgcaatctga tattaatgtt aaattggtgc tttctattac aaagaattta aaagagcgtg
      781 ccttgaatga acagtctcca aaaggattat caagaaaaga tcatattatt acaatacttt
      841 ataatgaaat tgcttcttta cttggatata gcggaacaag cataactaat atagagaaat
      901 cttattcaga cgaaaaagaa tctctaaatt ttaaacctgg gaagaagaat atcattttga
      961 tgcttggtat tcagggaagc ggaaaaacta cttgtacagt taaacttgcg agatggttaa
     1021 ccaggcacgg atataaaaca gctattatag gtgcagatac gtggagacct ggcgctctta
     1081 cacaattgaa gatgaatagc attaaaatta aagtggaagt ttatggagaa gaagataata
     1141 agaatcctgt ttctatagtg agaaatggat tagagtatta taataatctc gattatgatg
     1201 taatcattat agatacagcg ggaagacaca aagaagagtc aggattatta caggaaatga
     1261 atgatatgta taatgttatt aatcctgata tagtcatcct agtaatagat ggtactattg
     1321 gacagcaggc atacaatcag gcagaagcat ttcacaatgc tgcccccgta ggaggaattt
     1381 tgataactaa attagatgga actgccaagg gtggaggtgc tctagcagcg tctgcagcca
     1441 cgggagctaa aattatgttt atcggaactg gtgaaaggat agatgattta gaattatttt
     1501 ctccaactag gtttgtaggg cgcatattgg ggatgggcga tatcaaggca ttgttagaaa
     1561 tggcaaaaag ccttgaattg gaggcagatg caaaccaagc taaaagatta ttgggtggta
     1621 gaatgactat agaagatttc tattctcaaa tggaaaatgt aagtaaaatg ggttttagaa
     1681 atgtaatgga aaatcttcca ggactttctg gtatggtaaa agatgaacaa ctagataatt
     1741 tacaaacaaa gattgaaaaa tggagatttg ttatacaatc aatgacaaaa gaggaaaaaa
     1801 aagatccaaa tgtgatcaat gattcaagga gaaaacgaat ttcaagaggc tcaggtataa
     1861 tggaacatga tgttaaagaa atgataaaac aatacaataa ttcaaaaagt atgatgaaac
     1921 aggcaaaagg cagacagatg catggaatgt tgagacgttt tggtttgggt taatgtaacc
     1981 attaataaca atagttaagt gcaataataa tttgaagcaa tctgaaaata ttatcaataa
     2041 tttttatact ctgtgtgatt attgtttaaa aagaaacaat gcagcaaaaa tattatttgg
     2101 taagtacggg atgcttagag atcataaagc aacaagtaca gataactctg cctcaaaatg
     2161 ttttatttgt aggggattat ttgatctcgt agaagaaatt gtaaaggaaa taacctttct
     2221 cgtatctgtc aaaaataaat atgaatttga ttcctattct ttgggaactt ctcttcctgc
     2281 atatttgttt gataatgaag atcatttcag gtctcttttt caactacgtg gagaagagaa
     2341 tatcaaatca gcttttaatc atgcagtgag aaataaattt gaaaaagtta
//
LOCUS       DATIAS010000541         5946 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_916045, whole genome shotgun sequence.
ACCESSION   DATIAS010000541 DATIAS010000000
VERSION     DATIAS010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5946
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_916045"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="VLA74_10800"
     CDS             complement(<1..235)
                     /locus_tag="VLA74_10800"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HSF51238.1"
                     /translation="MSIESSSLSTNIIKINPEYSKLVNPLSNTEYNVLKNSISNKGLH
                     LPIIINQDNVILDGHNRLKICQELGIDPKFEVKE"
     gene            complement(423..902)
                     /locus_tag="VLA74_10805"
     CDS             complement(423..902)
                     /locus_tag="VLA74_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51239.1"
                     /translation="MISKQQYEVQIRQIFKLLLENKTQDEIARELNIGVRTVARYSQR
                     IEKRYGEMQRQKTDSTLFLECQLFKNRMLTLYKILEEKAASSPNNTNGHEIAKCCEVA
                     ADIAINVLKMESEGIKAVKDALIAEKEATKRSSSAISSNSNNNNSYMMYYDELEESC"
     gene            complement(1017..1316)
                     /locus_tag="VLA74_10810"
     CDS             complement(1017..1316)
                     /locus_tag="VLA74_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51240.1"
                     /translation="MSGHRGQGGHPLTLKKILINLRTILGIFGYFGMRGVSTYFFIAW
                     TGGSNKMFLNLSYYSFSSKDRSFSCVKSMLKMIQNKKIKNFIGMEACPVCPPCPV"
     gene            complement(1321..4050)
                     /locus_tag="VLA74_10815"
     CDS             complement(1321..4050)
                     /locus_tag="VLA74_10815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid primase, P4 family"
                     /protein_id="HSF51241.1"
                     /translation="MTSSNTNIFNEVADFLFYEIGANPIPADTKYKRINKHWGDFQDK
                     SVPVEVHEFRKEKGEYDNGIAVMTGRFHKGKNKGKFLIGIDCDNKKAIEEICNTLGFK
                     NINELAGWTWVEQHKDNADKAHIYILSTKPFKNKGRSVDNTRLELLNEIPAIEVKCER
                     QTMFTAPSIHEDGYPYEILGTREPVLCDEFENHLDNISRKYNIEYLDNHGHTNNNNSL
                     PQPLRQLINWLEIPPNFQFKIHEGSRHNTLISFANALLFKYKFDTNVSRKDELRNFFY
                     DVNNKLCVPEPLPDEEIKNIWRDSLKNSEEKTSRIKIENEDENDASSYKSQVIIPLDY
                     DDQLLETVETFVYDIQKNSVDCSLNSKYKLGTRVIVPINIKQWPDVRKNFKKECIEKG
                     IDEIDISLLLESLDKNIDLITKHYLENHRKNVAALAAAKERKRQRLDLIKEGTEFVIS
                     KYNFRTIMESKEILKYDSNSGVYVPYGDIIIEEEIDKKYGYQLKTNEINEIKKYVQRK
                     TYTKLEAFDANLDIINLEDGLFNWRTKEFLPHKPDYYSLNQKPIKYNPEAIPRRFIKF
                     LREVLHLRDIRTVVEIIAYTFIRTHWFQYYYILKGEGGNGKNVLIGILSHLHGEKNVS
                     NVPLKDISKDRFALVDLVNKDINVDTESTIIDDISSLKKLTDPQLVRVQQKGQPAFDA
                     RLHAKPIFAANKLPTTADNTDARFRREIIIDFPNQFQDGINADPDLLNKIVNNEEEMS
                     GIFNLVVNSLSTITKNNKIHINAATISQRRAKAKLIQDTIGSFLDDALAKEATDKDFE
                     TSDDMHAAFMRFCLYHQISGPGYDKFLEDLNEKYKKKYDLEKGRKKTPEGKKTIWKRC
                     KLVKWKNPDDPTQSTLDEDDEDEEYYESENEEQEPESPEEKYKREQEEMKRWG"
     gene            complement(4043..4333)
                     /locus_tag="VLA74_10820"
     CDS             complement(4043..4333)
                     /locus_tag="VLA74_10820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51242.1"
                     /translation="MNKKEGRGKNTKPKDNNTLSNNLLKFLSETNTKGYEICNVVDDD
                     GDSIYTVDIEELAKYEGQVFISTNAIEKLVSLIIDQQQQRVGTSLNKNIEDD"
     gene            complement(4405..5151)
                     /locus_tag="VLA74_10825"
     CDS             complement(4405..5151)
                     /locus_tag="VLA74_10825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51243.1"
                     /translation="MNNNKEEIVVTTNSPKYQQASIKLRHAWLEYKNREEVVKYEIVN
                     MMQILEKDGYGREEAIQKIIADHKDLDGFSRKTIYRKLPEEMKSKELGRPNMSRDILG
                     QPNTELEKFRKQKGTQVETETNVQNNVIEDDVDKRCQHNVLEDSSTIGNHELQDELEP
                     VPQDDEDDLNEAIDAVDDVDPIEAEPHIQYDDPQKIILQLKQRIIKLMQHYKFEYTVI
                     YKDQEIPLVVTSKPEIKSGMVEIDQKKSEK"
     gene            complement(5144..5395)
                     /locus_tag="VLA74_10830"
     CDS             complement(5144..5395)
                     /locus_tag="VLA74_10830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51244.1"
                     /translation="MSKEKNKILDSDTNTASNKLKKFTKENNNFKKNELFNVISETDN
                     PIYFPLFEELTVMQQLKILRYTIDSMESLMSGKLEQNLE"
     gene            complement(5410..5610)
                     /locus_tag="VLA74_10835"
     CDS             complement(5410..5610)
                     /locus_tag="VLA74_10835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51245.1"
                     /translation="MENSAFLHINNSQPKICKQLWVLGDKHLVIIDKSIIEKLGITDN
                     STVFLEQEILQDNTIVMKIKKF"
     gene            complement(5620..5832)
                     /locus_tag="VLA74_10840"
     CDS             complement(5620..5832)
                     /locus_tag="VLA74_10840"
                     /inference="COORDINATES: protein motif:HMM:NF014723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin VapB family protein"
                     /protein_id="HSF51246.1"
                     /translation="MYLKLTEPTTISISKENYCILKKMGFTGESFNDVLDRILKNNIN
                     LLESNSRVAAHERTLTSSHTPLFKRK"
BASE COUNT         1711 a         1036 c          744 g         2455 t
ORIGIN      
        1 attctttgac ttcaaatttg gggtcaattc ctaactcttg acatattttt aacctgttat
       61 gtccatctag aataacatta tcttgattta taattattgg cagatgaaga cctttgttgc
      121 ttattgaatt tttcaataca ttatactctg tatttgataa tggatttact aatttagaat
      181 attctggatt aattttaata atatttgttg acaatgatga tgattctatg gacatttttt
      241 atttattttt ctccttcctc ttatttatct tcattttgtt gttatattaa gttcctgctg
      301 ctaatttaca tgaaaacaga aaatagtagt ggaaggaagg aaagaaataa agataatttt
      361 ttattgttgt tattaattgt agtatataca tgttgttaga taaagaaaaa aataacacta
      421 tatcagcaac tttcttctaa ttcatcataa tacatcatgt agctattgtt attattgctg
      481 ttgctgctaa ttgctgatga tgatcttttt gttgcttctt tttctgctat cagcgcatct
      541 ttaaccgctt tgataccttc gctttccatc ttcaaaacat ttatcgctat atctgcagca
      601 acttcacagc atttagcaat ctcatgtccg tttgtattat ttggtgatga tgctgccttt
      661 tcttccaaaa ttttgtacaa agttagcatt ctatttttga acaactgaca ttctaaaaag
      721 agtgtgctgt ctgtcttctg tctctgcatt tctccatatc tcttctctat gcgttgagaa
      781 tatcttgcta cagtcctaac tccaatattt aattctcgag caatttcatc ctgagtctta
      841 ttttcaagaa gtaatttgaa tatttgtctg atttgaacct catactgttg tttgcttatc
      901 atatatctcc ctctatatct ataatatttt ttatatagcc tgaacttatt tataaaaata
      961 ataaaaaaaa catgccatat tatgccacat tcttcatttt tttctcttat tattctttat
     1021 actggacaag gtggacacac tggacacgcc tccataccga taaaattttt tattttttta
     1081 ttttgtatca ttttcaacat tgattttacg cacgaaaatg acctatcttt gctagaaaat
     1141 gaataataag acaaattaag gaacattttg ttagatcccc ctgtccacgc tataaaaaag
     1201 taagtggaca cccctctcat tccaaaataa ccaaaaatcc ctaaaatcgt gcgtaaattt
     1261 attaaaattt ttttcagtgt aagggggtgt ccaccctgtc ccctatgtcc actcaatttt
     1321 ttatccccat cttttcatct cttcctgttc tcttttgtat ttctcttctg gagattcagg
     1381 ctcttgttct tcattttcac tttcataata ttcttcatcc tcatcatcct catctagagt
     1441 actttgtgta ggatcatctg gattcttcca ttttacgagt ttacatcttt tccatattgt
     1501 ctttttacct tctggagtct tttttctacc cttttctaaa tcatatttct tcttatattt
     1561 ttcattcaaa tcttctaaaa acttgtcata acctggacct gatatttgat ggtataaaca
     1621 aaatctcata aatgcagcat gcatatcatc acttgtttca aaatctttat cagtggcttc
     1681 tttagccaaa gcatcatcga ggaatgatcc aatagtatct tgaattaact tggctttagc
     1741 acgcctttga cttattgttg cagcatttat atgtatttta ttatttttag tgattgtact
     1801 taatgaatta acaaccaaat taaatatgcc tgacatctct tcttcattat ttacaatttt
     1861 attcaacaaa tcaggatctg catttattcc atcttggaat tgattaggaa aatctattat
     1921 tatttccctt cgaaatcgtg catcagtatt atcggcagtt gtcggtaact tgttggcggc
     1981 aaaaattggt tttgcatgta atctagcatc aaaagctggt tgacccttct gttgtaccct
     2041 tacaagttga gggtctgtta gcttctttaa agaagatata tcatctatta tagtactttc
     2101 agtatctaca ttgatatctt tgttaaccaa atctactaaa gcaaatcgat ccttagatat
     2161 atctttcaaa ggaacattac ttacattttt ttctccatgt agatggctta aaattcctat
     2221 taatacattc tttccatttc caccttcacc tttcaatata taataatatt gaaaccaatg
     2281 tgttctaatg aaggtatatg ctattatttc aacaacagtc cttatgtccc ttaggtgaag
     2341 tacttctctc aagaatttga taaatcgtcg tggtattgcc tctggattgt actttatcgg
     2401 tttctgattc aaagaataat agtcaggttt atgaggtaag aattcttttg tacgccaatt
     2461 aaacaatcca tcctctaagt ttatgatatc taggttagca tcaaatgctt ctaattttgt
     2521 atatgtttta cgttgaacat atttttttat ttcatttatc tcattagttt taagttgata
     2581 gccatatttt ttatcaattt cttcttcaat aataatatct ccataaggaa cataaactcc
     2641 actattacta tcatatttta aaatttcctt agattccatt attgttcgaa aattatattt
     2701 tgatattaca aattctgtac cttcttttat aagatcaagt cgttgtctct ttcgttcttt
     2761 agctgcagct aaagcagcta cattttttct atgattttca agataatgct ttgtgattaa
     2821 atcaatattt ttatctaagg attctaataa aagtgagata tctatttcgt ctattccttt
     2881 ttcaatacac tcttttttga aatttttacg gacatcaggc cattgtttta tatttatagg
     2941 aactataacc cttgttccta gtttatactt tgaattaagt gaacaatcta cgctattttt
     3001 ttgtatatcg taaacaaatg tttctacagt ttctaatagt tgatcatcat aatctaaagg
     3061 tattataact tgggatttgt aactggaagc atcattttca tcctcatttt caattttaat
     3121 tcttgatgtt ttttcttctg aattttttaa agaatctctc cagatatttt ttatctcttc
     3181 atcaggtaaa ggttcaggta cacataactt attattaaca tcataaaaga aatttcttag
     3241 ctcatctttt ctactgacat tagtatcaaa tttatattta aataataatg cgtttgcaaa
     3301 agatatcagt gtattatgcc ttgaaccttc atgaatctta aattgaaaat taggaggtat
     3361 ttctagccaa ttaattaatt gtctaagtgg ctgaggcaag gaattattat tatttgtgtg
     3421 tccatgatta tcaaggtact cgatattata ttttctagat atattatcta aatggttttc
     3481 aaactcgtca cataaaactg gttctcttgt ccctaaaatt tcatatggat atccatcttc
     3541 atgtattgaa ggagcagtaa acatggtttg tctttcacat tttacctcaa ttgctggaat
     3601 ttcatttaat aattctaacc tagtattatc tacacttcta cctttattct taaatggttt
     3661 cgttgaaagt atgtaaatat gcgccttgtc agcattatcc ttatgctgtt caacccatgt
     3721 ccaaccagcc aattcattaa tgtttttaaa tcctaaagta ttgcagatct cctcaatggc
     3781 ttttttgtta tcgcaatcga ttcctatcaa aaatttacct ttatttttgc ctttatggaa
     3841 tctaccagtc ataactgcta ttccattatc atattcacct ttctcttttc taaattcgtg
     3901 tacttcaact ggaacagatt tatcctgaaa gtctccccaa tgtttattga ttctcttata
     3961 tttggtatca gcaggaatag gattagcacc tatttcataa aacaagaaat cagctacttc
     4021 attaaatata ttagtatttg aactagtcat cttcaatatt tttatttaat gaggttccta
     4081 ccctctgctg ctgttgatca attattaaac tgacaagttt ctcaattgca ttagttgaaa
     4141 tgaagacttg accttcatat tttgctaatt cttcaatatc tacagtatat atcgaatcac
     4201 catcatcatc tacaacatta caaatttcat atccttttgt attagtttca gaaagaaact
     4261 ttaataagtt gttagataga gtattgttgt ccttcggttt cgtatttttt cccctacctt
     4321 cttttttatt caattaagaa atcatcatct ccaatcaaat taattttagt atatgatatc
     4381 caatcaagtg tactaagtaa cccatcattt ttcacttttt ttttgatcaa tttctaccat
     4441 accagatttt atttctggtt ttgaagtcac aactagagga atttcctgat ctttatatat
     4501 gactgtatat tcaaatttgt aatgttgcat taacttaatg atcctttgtt ttaattgtag
     4561 tatgattttt tgaggatcat catattgtat gtgtggttct gcttctatag gatctacgtc
     4621 atctactgca tctattgctt catttagatc atcctcatca tcctgtggta ctggttctaa
     4681 ttcatcctgt agttcatggt tacctatagt agaagaatct tctagaacat tatgttgaca
     4741 acgcttgtca acatcatctt caataacatt gttctgtaca tttgtttctg tttctacttg
     4801 tgtacctttt tgctttctga atttctctaa ttcagtatta ggctgtccta atatgtcacg
     4861 tgacatatta ggtcgaccta actctttact cttcatctct tcgggtaatt ttctatatat
     4921 tgtcttacga gaaaatccat ccaaatcttt atgatctgct attatctttt gaattgcttc
     4981 ctctctacca tagccatctt tttctagaat ttgcatcatg tttacaattt catatttgac
     5041 cacttcctct ctgtttttgt attcaagcca agcatgtctt agttttattg aggcttgttg
     5101 gtattttggt gaattagtag ttactacaat ttcttcttta ttattattca agattttgtt
     5161 ctaacttccc agacattaaa gattccattg aatctatagt atatcttaaa attttaagtt
     5221 gttgcattac tgtcagctct tcaaatagtg gaaaatatat tggattatct gtttcagata
     5281 taacattaaa caactcattt tttttaaaat tattattttc tttagtaaac ttttttagtt
     5341 tgttagatgc agtattagtg tcactatcta agattttatt tttttcttta ctcattttct
     5401 atcacctatt cagaattttt tgattttcat cacgatagta ttatcttgta atatctcttg
     5461 ctccaagaaa actgtagaat tatctgtaat tcctaacttt tctattatag atttatcaat
     5521 gataactaga tgtttatccc ccaataccca taattgctta caaattttag gttgagaatt
     5581 gtttatatgt aagaatgcag aattttccat tactacatat cacttccttt taaaaagagg
     5641 ggtatgacta cttgttagag tcctttcatg ggcggcaact cgagaattag attctaacaa
     5701 gttaatatta tttttcagga tcctgtccaa tacatcgttg aaactttccc cagtaaaacc
     5761 catcttcttt agaatacaat aattttcctt ggagattgat attgtagttg gctctgttaa
     5821 tttaagatat attcacctcc tctaactcaa aataattatt attatttgct attgtatcat
     5881 tatacataga tacaaaaaat tgtatccaat tttgtacatg taatagattg cattcatctt
     5941 tttgca
//
LOCUS       DATIAS010000542         2750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_779127, whole genome shotgun sequence.
ACCESSION   DATIAS010000542 DATIAS010000000
VERSION     DATIAS010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779127"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VLA74_10845"
     CDS             complement(<1..217)
                     /locus_tag="VLA74_10845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51247.1"
                     /translation="MIYTKNCLVVIFLIVSLTPSFFILSGENIISAYGFQENENQGML
                     TITLSSINGSLLSNGTFLIAPDPILKNQ"
     gene            466..786
                     /locus_tag="VLA74_10850"
     CDS             466..786
                     /locus_tag="VLA74_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51248.1"
                     /translation="MGEESGKTLARTGEIWIINKLHTYFMYNIFSGNTKARFAPQDNL
                     IMNYILFLRIKNKENKLYIKSPYHYLFFNELSNDKIKNNPHRFEDELPKDGCFSLMEL
                     QEIK"
     gene            1556..2296
                     /locus_tag="VLA74_10855"
     CDS             1556..2296
                     /locus_tag="VLA74_10855"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSF51249.1"
                     /translation="MIKDKVALITGASSGIGYATALALSKAGAKVALGARRTDRLESL
                     KKHITPTGGEVLIYKLDVTKKEQCDSFVDAVIKSWKTVDILINNAGIMPLSFFKNLKV
                     SEWDQMIDVNIKGVLYCTAAVIQEMVNKKSGHIVNISSVAGRIVFPSASVYCATKHAI
                     TAFSEGLRQEFSPRYNIRVTSIEPGVVSTELINTITDKSLEGFVEKSKKMESLKAEDI
                     ANAILFALESPSYVNVNEILIRPTIQEV"
BASE COUNT         1010 a          368 c          426 g          946 t
ORIGIN      
        1 gttgattttt cagaatagga tctggagcaa tcagaaatgt tccgtttgat agaagggagc
       61 cgttaataga agataacgtt atagttaaca ttccctgatt ttcgttctcc tgaaaaccat
      121 atgctgaaat aatattctca ccagatagta taaagaagga tggagtaaga gaaacaatca
      181 gaaatataac aacaagacaa ttttttgtgt agatcacatt atagaaactc cgaatataat
      241 ttataaatct aatttttggt aagatgttgc ctgtatttga cagcgttgaa accttgtgct
      301 aaaaatcatc tatttactga atctgctggt cagggttaga aaatacgagg acagatccag
      361 tttcaatgta tacaaaacat gtctgaacga tgttggtcag gtatttacta aagatttcta
      421 tatatatttt gaagtgtaat ttaggttggg agggtaatta gaagaatggg agaggaatct
      481 ggaaagactt tagcgcgaac aggtgagatt tggattataa acaaacttca tacttatttt
      541 atgtataata ttttctcagg taatacaaaa gctaggttcg ctccgcagga taatttaatt
      601 atgaattata ttctattttt gaggattaaa aataaagaaa ataaattgta tattaaatct
      661 ccatatcatt acctattctt caatgaactg tctaacgaca aaataaaaaa taacccccac
      721 agatttgaag atgaattacc caaagacgga tgtttttctc taatggaatt acaagaaata
      781 aaataaataa gtttagcaaa aatgtttttt gaaaaattaa agaacttttt agtaaagata
      841 tcctttattt tgatggcatt acaaattatt catttattct ggctaacttg taatgtaaca
      901 cttcctatgt ttaattttaa tgatttaaaa tttaatgaag gttcattttt atttgtttct
      961 atagactatc ttgaaatacc ctctctaatc attacctcta caagttatct atttataata
     1021 tttagggaaa atcgtaagcc taaaaatatt ctatacctta gtatgttact attacaattt
     1081 ttccatatat tctggataac agacgaattc attgtgaact atttctatga tttacctttc
     1141 tatctattgg tatttgtggt ttttatagat tattctgaat tatttatatt atttgattta
     1201 ggtaaaagat tattggttcg aatgagctga taatatttac agatcgaatc aatcttatgt
     1261 tattcttttc agaatataat tagttattag gctttataag cactcacaat acctaaaaat
     1321 actaaaggtt atgacataca catttactta ttgaatcttt gaatgcaact gttaaattga
     1381 ccggacttct attccataat cttcttttat agatacacta ttattttata taattaatat
     1441 atttattata aatcaaaaaa aattatttgt tctgtaacaa cttcagaaaa ttttattttt
     1501 ttatctaaaa aataacaaaa aatttaaggg tgtttgctat tctcacacag taatattgat
     1561 aaaagacaag gtggcgttaa ttacaggtgc tagtagtgga ataggttatg caactgcctt
     1621 ggcattatct aaagccggtg cgaaagtagc attgggagct agaagaactg acagactaga
     1681 atcattaaaa aaacatatta cgccaactgg cggagaggtt ttgatttaca agttagatgt
     1741 tacaaaaaaa gaacaatgtg attcatttgt tgatgcagtc ataaaatctt ggaaaacagt
     1801 agatatccta atcaacaacg ccggtattat gccgcttagt ttctttaaaa atctaaaagt
     1861 tagtgaatgg gatcaaatga ttgatgttaa cattaagggt gtcttatatt gtactgctgc
     1921 agtaattcaa gaaatggtaa ataagaaatc cggccatata gttaatattt cttctgtagc
     1981 aggacgaata gtttttccat cagcaagtgt ttattgcgca acaaagcatg ctatcactgc
     2041 attcagcgaa ggattaagac aagagtttag tcctagatat aacataagag taacatcaat
     2101 agagccaggg gtagtttcaa ctgaattgat aaacacaatc accgacaagt cattagaagg
     2161 gtttgttgaa aaatcaaaaa agatggaatc tctcaaagct gaagacatag ctaatgctat
     2221 tctatttgca ttagaatctc catcatatgt aaacgtaaat gagatcctca taagacctac
     2281 aattcaagaa gtgtaggtat cagtatttag tagatatatg taattagact atatctacat
     2341 tttctttaag aaatttcata ctatttgatg aaccagaaaa attaccggtt attagaaaat
     2401 ttgacaatac cagatacaat atgtactatt ttaccagaga atttgattat gttcttatcc
     2461 tcttggcaag taataatttt gtacaaaaaa aaatatttat ataaaaaagg aaatagacca
     2521 tattcactgc aaatgactga actctatgtt gatatcctct gatgacagaa ggaatacata
     2581 ttttaaaaat ggaactctaa gaatagaata gaatcattaa tttgtgtttg atttgactaa
     2641 aataatagtg aatgttaata tcataaatag tttacttgat ataagtaatt attcttttca
     2701 cacatattca aaaaaatctt caccaaacaa atctttatat tcttgatagc
//
LOCUS       DATIAS010000543         2564 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_916098, whole genome shotgun sequence.
ACCESSION   DATIAS010000543 DATIAS010000000
VERSION     DATIAS010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_916098"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            470..2335
                     /locus_tag="VLA74_10860"
     CDS             470..2335
                     /locus_tag="VLA74_10860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51250.1"
                     /translation="MIDNKAVFIQIVDGKPILSSKISLSDFDIVPPDRIEYQSREYIF
                     NSEEEVDHFIDLAKNETVDSLFKKVKSILKKYIDLDEDFINILAADIIFTYFQDKLGM
                     THYLLIVGDNNTGKSNILLVFSFLGYRSVLDVSITPANIYNFGSQLEEGQCIILEDEI
                     GDIDDQFEKKKMYQVSYRTGTKVTRMYDNNNSNNTKRKSSRQQGFFLFSFKMFASENM
                     PDKRKSKGFLERIIPLKAVPGDPQFDISEVVDGSGDEQFKELYQELEDTQKLLLMYRL
                     LHHNETIPDVKLNIKNRYKQLTKPLIRLFQNTESVNDIIKSLSKYLIEKNQEKIDSLD
                     SAILTFIINLVSKYGEILCNDQIWQDLKEKYRDGEMPDKPYSWYLEGYGSISKNNITK
                     ICETKFGAKPYRDSEKGRGLIFNQKTLNKLIVNYSIIDEIKIIKEEKKDNEDPTAQNS
                     NDTYDTNDTFTEDADKNSKDSVTNNANNMTEMTQEPEGSNPQNSNITTKNDTNIDTKP
                     NTHSSEVSYVSYPSYNTTNTKDQEPSAEIPDVAISSQQSMQLKIQAGLFTNPLISESD
                     LLTGNYDPQVINNIDRVHPDSDRWFCNNCTLRDDKWGMMRHLCKHNKKTKKETEI"
     gene            2339..>2564
                     /locus_tag="VLA74_10865"
     CDS             2339..>2564
                     /locus_tag="VLA74_10865"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HSF51251.1"
                     /translation="MSASSTTTNIKINPEYVKLINPLTKLEYDVLKNSISNKGLHLPI
                     IINQDNVILDGHNRLKICQELGIDPKFEVKE"
BASE COUNT         1064 a          377 c          411 g          712 t
ORIGIN      
        1 ttgttcttct tccatctaac ctgtcgaagt acgcttgtac accaactttc atcaggaaga
       61 gatgtagtta aagtaaacac atcttaatta ggtgttatcc agctttaagc ttgactgaaa
      121 catttgtcaa taagagcgaa attttattct agatttaaat catgtatatg ataatgtacg
      181 aatcatttgg cattataaca aaaactggaa tatagtaaaa agtacttgtc aaaaagaatg
      241 taaaaagaaa ggaatacaag attctcatat ttcatttatt gaggacacaa tagatgcaaa
      301 ttacaatact ataactataa cacaacaaca ggagccaaaa aaagaagagg aaccaagaga
      361 acaaaataat gaagatcatg aaggaaataa aaagaaagaa gataaagaaa agagacagct
      421 ccatgttatc aacaaatatt ctcaagaaat actattagca gaatctatat tgatagacaa
      481 caaagcagta tttatacaga tagtagatgg aaaaccaatt ttatcctcaa aaatttcttt
      541 atctgatttt gatatagtac ctccagatag gatcgaatat caaagtagag aatatatctt
      601 caattcagag gaggaagtag atcatttcat cgatctggca aaaaatgaga ctgttgattc
      661 tctctttaag aaggtaaagt ctatcttgaa aaaatacata gatttagatg aggactttat
      721 caatatttta gctgctgata ttatctttac ctattttcaa gacaaattag gaatgactca
      781 ttacttgtta atcgttggag ataataatac aggaaagagc aacatattat tagtattttc
      841 atttctagga tacagatcag tgcttgatgt atccatcaca cctgcaaata tttacaattt
      901 tggaagtcaa ctagaagaag gacaatgcat tatcttggag gatgaaatag gtgatataga
      961 tgatcagttt gaaaaaaaga aaatgtacca ggtcagttat agaaccggta caaaagtaac
     1021 gagaatgtat gacaataata attcaaataa tactaaaaga aaatcctcaa ggcaacaagg
     1081 ctttttttta tttagtttta aaatgtttgc ttctgaaaat atgccagaca aaagaaaatc
     1141 taaaggattt ttggaaagaa taataccatt aaaagcagta ccaggagacc ctcaatttga
     1201 tatttccgaa gtagttgatg gctcaggaga tgaacagttt aaagaactat atcaagagct
     1261 tgaagatact caaaaattat tattaatgta tagattatta catcataatg aaacaatacc
     1321 agatgtcaag ctaaatatca agaacaggta taaacagtta actaaaccat taatcagatt
     1381 atttcagaac acagaatcag ttaacgatat tataaaatcc ttatctaaat atctgattga
     1441 gaagaatcaa gaaaaaatag actcgctgga ttctgcaata ctgactttta ttataaatct
     1501 tgtatcaaag tatggtgaaa ttctatgcaa tgatcagatc tggcaggatt taaaggaaaa
     1561 gtatcgtgat ggtgagatgc cagataaacc ctattcttgg tatttggaag gatatgggag
     1621 tatatctaag aataacataa caaaaatctg tgaaactaag tttggagcta aaccatatag
     1681 agattctgaa aaaggaagag gactaatctt taatcaaaag actctgaaca agttaatcgt
     1741 aaactactca ataattgatg aaataaaaat aatcaaagaa gagaaaaagg ataatgaaga
     1801 tcctactgct caaaattcta atgacactta tgacacaaat gacactttta cagaggatgc
     1861 agataaaaat agtaaagata gtgtaacgaa taacgctaat aatatgacgg aaatgacaca
     1921 agaaccagaa gggtcaaatc ctcaaaactc caatataaca acgaaaaacg atactaatat
     1981 tgatacaaaa cccaacacac attcctcaga agtgtcatat gtgtcatatc cgtcatacaa
     2041 tactactaac actaaagatc aagaaccctc agctgaaata ccagatgttg ctatttcttc
     2101 acaacaatct atgcagctaa aaatacaagc aggattattt acaaatcctt tgatctctga
     2161 atccgatctt ttaactggaa attatgatcc ccaagttatt aataatatag acagagtaca
     2221 tccagattca gatcgttggt tttgcaataa ttgcactctc agagatgaca aatgggggat
     2281 gatgaggcat ctctgtaaac ataacaagaa gacaaagaag gagaccgaga tctaaaaaat
     2341 gtcagcatca tcaacaacaa caaatattaa aattaatcct gaatatgtca aattaataaa
     2401 tccactaaca aaattggaat atgatgtatt gaaaaattca ataagcaaca aaggtcttca
     2461 tctgccaata attataaatc aagataatgt tattctagat ggacataaca ggttaaaaat
     2521 atgtcaagag ttaggaattg accccaaatt tgaagtcaaa gaat
//
LOCUS       DATIAS010000544         2083 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_507867, whole genome shotgun sequence.
ACCESSION   DATIAS010000544 DATIAS010000000
VERSION     DATIAS010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507867"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..932)
                     /locus_tag="VLA74_10870"
     CDS             complement(27..932)
                     /locus_tag="VLA74_10870"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSF51252.1"
                     /translation="MRLKTYVMLLASTGLRATEALSIRLKDLDITTTKSNETAKLIIR
                     GEYTKTKVDRYVFLTREVVEQIKIWLDYKYRKRRICYTDKETGKCVTEYRTPKKNPNE
                     LVFSTYQTDNPRPEVLYVNFAAIFSKTLDRIGMGSREDGNEIRRQITLHSFRRFVKTT
                     ISDLGYADYSEWFIGHSVSTYWRKKDSEKVEIFKKIEPYLTFLNLPQLERQGADLQTK
                     IEELQDINQLLRYKHNEKEEQIKKLEESVVFLADRFNAFLASQPGNTILYDDGNDGQS
                     GIAVKGIELKPELHNKAVGKVIPKK"
     gene            complement(970..>2083)
                     /locus_tag="VLA74_10875"
     CDS             complement(970..>2083)
                     /locus_tag="VLA74_10875"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51253.1"
                     /translation="TFTIFHFSNVFSADDGFFSIVPEDYYDPREYGEESIVPKQLQEN
                     NTSDQNALPTITTTNKNSFNIAITADWGCTEDTKKTAENIQKKNPELVIAGGDLSYEE
                     SASCWFKIIQPFKSKIKIAMGDHEYSDTSGGAIGITDQYLKPLNLAKTYYSFDMNNVH
                     ITIIDPYIDYSSSSTQYQFIENDLKTVSTNPNIDWTFVVESIPIYTSPSQHPGNSTIR
                     DIYHPLFDKYGVDLVFTSDNHNYQRTFPLKYNSQGGVGESSNNPIIVEDNNQNNHYSN
                     NDDGGVIYLITGTADRSLYEIKEQAPFVAKQDDKHFGFLNIDISSNTLKGTFYANESK
                     LPRYHYVNYQNNIIIDQFTISKMDKPNNNDNEFDKL"
BASE COUNT          633 a          351 c          276 g          823 t
ORIGIN      
        1 aagtggaata ataatagtaa gtgaaattat tttttaggaa ttaccttccc aactgcttta
       61 ttatgtagtt ctggctttaa ttcaatccct tttacggcta ttccactttg tccatcatta
      121 ccatcgtcat ataggattgt attgccaggc tgacttgcta aaaatgcatt aaatctatcg
      181 gctaaaaata caacagactc ttccaatttt ttaatctgct cttctttctc attgtgctta
      241 taccttaata attggttaat atcttgtaac tcttctatct ttgtttgcaa gtctgctcct
      301 tgtctttcca attgtggaag atttagaaaa gttaaataag gctcaatttt cttaaaaatc
      361 tctacttttt cactatcctt ctttctccag tatgtagaaa cagaatgacc aataaaccat
      421 tcagaataat ctgcataacc aagatcagat attgttgttt ttacaaaacg tctaaacgaa
      481 tgtaaagtta tttgtcgtct aatttcattt ccgtcttctc tagagcccat tcctattcta
      541 tctaaggttt ttgaaaaaat tgctgcgaaa ttaacatata gtacttctgg tcttggattg
      601 tcagtttgat atgtagaaaa gacaagttca tttgggttct ttttaggggt tctatattca
      661 gttacacact ttcctgtttc tttatcggta taacaaattc tccgttttct gtatttataa
      721 tctaaccata tttttatttg ttctactact tctctagtca aaaatacata tctatctact
      781 tttgtttttg tatattcacc tctaataatt aatttagcag tttcattaga tttagtagta
      841 gtaatatcca aatcttttag cctaatagat aatgcttctg ttgctctcaa accagtcgaa
      901 gccaataaca ttacatatgt ttttaatctc aagtcggaac aaccatttta aaattttcga
      961 gtcaaatctt caaagtttat caaactcatt atcattattg ttaggtttat ccatctttga
     1021 aattgtaaat tgatctatta ttatgttatt ttggtaattt acataatgat agcgaggtaa
     1081 tttgctttca tttgcataga acgttccttt taaagtatta ctacttatat ctatatttag
     1141 aaatccaaaa tgtttatcat cctgttttgc aacaaaaggc gcttgttctt ttatctcata
     1201 aagagatctg tctgcagttc ctgttatcaa gtaaatcact cctccatcat cattattact
     1261 ataatgatta ttttgattgt tatcttctac tattatagga ttattggaac tctctccaac
     1321 accaccttgg ctattatatt ttaatggaaa agtcctctga tagttgtgat tatcacttgt
     1381 aaatactaaa tccaccccat atttatcaaa aagagggtga taaatatctc tgattgtaga
     1441 attgccagga tgttgagaag gtgaagtata aattggtata gactctacaa caaatgtcca
     1501 atctatattt ggattggtag acacagtttt taaatcattt tcaatgaatt gatattgagt
     1561 agaactactg ctataatcga tatatggatc tatgatagta atgtgaacat tattcatatc
     1621 aaacgaataa tatgtttttg ctaaattcaa aggtttaaga tattgatcag ttatacctat
     1681 tgcaccacca ctagtatcac tatactcatg atctcccatg gctatcttta tctttgattt
     1741 aaatggctgt attattttaa accaacaact tgcagattcc tcataactta aatctcctcc
     1801 tgcaattaca agttcaggat tcttcttttg aatattttct gctgtttttt ttgtatcttc
     1861 tgtacatccc caatctgctg taatcgcaat attaaaagaa tttttatttg ttgttgttat
     1921 tgttggtaaa gcattttgat cggaagtgtt attttcttgt aattgttttg gaactattga
     1981 ttcttctcca tattctctag gatcataata atcttcagga actatactaa aaaatccatc
     2041 atctgctgag aacacattac taaaatgaaa tatagtaaag gta
//
LOCUS       DATIAS010000545         7002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1870842, whole genome shotgun sequence.
ACCESSION   DATIAS010000545 DATIAS010000000
VERSION     DATIAS010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7002
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1870842"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VLA74_10880"
     CDS             <1..362
                     /locus_tag="VLA74_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51254.1"
                     /translation="NSSYEQKEDYNYPQSQQYPYSHANNFSDPPFNNENNNIQSFPYS
                     PNNSDITETRTFNIDDKIRIQKKLKNLENSFNKVYPKPVVSLIMKILKDRCYREQSDE
                     PLKRYLEKTNMGYLWPD"
     gene            460..548
                     /locus_tag="VLA74_10885"
     tRNA            460..548
                     /locus_tag="VLA74_10885"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:494..496,aa:Lys,seq:ctt)
     gene            581..1828
                     /locus_tag="VLA74_10890"
     CDS             581..1828
                     /locus_tag="VLA74_10890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51255.1"
                     /translation="MTIIDDMEDFGDASSHDNILDLTPYENFIFALKSSETRRQYPKL
                     LKIFLDFINIDKSKPIEERADVLYKISIENRKWLESQIFRYVKYYREKVEKREISAGT
                     LKNYLKVVKLFCRMNDLEDQIHWYKIKIGMPKVKEYADDRAPTLDEIRKLVDYPDIRI
                     KPIVHTMMSSGIRLGAWDYLKWKHIIPYISEKNGEILGAKIIVYAREPEEYYSFITPE
                     AFISLKEWMQLRERHGENITGESWVLRDLWETSNTKYGDLDKQASNPSKFNSTGVKTM
                     LSRAWHHQGVWTVLKDGEKRHEFKLAHGFRKFFETQTQKVMNHNNIKILMGHSSSMGL
                     SKNYYKPTEKEVLENYLHAIHLLTVNEENKLKKKVKELTEKSKDDDYIIRSKLLERDE
                     QINSLRSELCTIRQIVDKIMSSP"
     gene            2085..2261
                     /locus_tag="VLA74_10895"
     CDS             2085..2261
                     /locus_tag="VLA74_10895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51256.1"
                     /translation="MKNIKKKRPKHTIVSDENFEQLRRFGYANDSMNDVITKILEKNK
                     WSESDESPNSRIRF"
     gene            2289..2429
                     /locus_tag="VLA74_10900"
     CDS             2289..2429
                     /locus_tag="VLA74_10900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51257.1"
                     /translation="MINSASFDINSTTTIENRKNIFSDDKIEELVQRGLNKRLGALQQ
                     EK"
     gene            2426..4885
                     /locus_tag="VLA74_10905"
     CDS             2426..4885
                     /locus_tag="VLA74_10905"
                     /inference="COORDINATES: protein motif:HMM:TIGR01613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid primase, P4 family"
                     /protein_id="HSF51258.1"
                     /translation="MISNTTAVMNQSADFWFYDIGVNVILANTKDKNTFESWTEWQNK
                     SISDEVHESRKKNGYYNNGIAIIPGPIWRGPYKGKYLVAIDLDNKKAIDEFVGSGLEE
                     LKQQTLVERHADPNKMHIYFIVEREIPNKASDKVDISKAEKIKANEIPALEVKSNSKG
                     IMFCSTSPHADGSNYQIIGTRKPQVFNAQDVENRISRICDKYGILYYGFNSNNGNNNG
                     NNIGPSIQELFTPKTKILKGHNRHLGILRVMDSLLVKNMSFLSLEQIKKLAYERNQDL
                     CVPPLDDRDMERLWNQALDWANRKIREREEAAAKQQQQNQQHEQEEKGQKNNNTTRTT
                     TKTKIEKQDLIEEATRLVMSIHRFLTIEETKEILFYDNENGVYVSGGEVLIEKELDKI
                     YSFKLRTSDITEVKNYVMRKTYTKREEFDSDLDIINLKNGLYNWRTGEFFSHTPDYYS
                     LNQKTFPYNPEARPKLFIKFLKEVLYLQDIRTAVETIAYSFIRKNLFEHYFILIGTGA
                     NGKSVFIGILSNLHGLKNISNVSLHSLVNNRFALSDLENKDINVDTELSSASINDMSA
                     LKKLTGTQPLRIEQKGKPAYDTIIYAKQIFNANQLPTTSDNSDAHYRREIIISFPRQF
                     EGKNEDPNLLNKIITNEEEMSGIFNLVVNSMRTIVNRNKIHVNASTISQRRAKAELTR
                     NPVKVFLDEALSKVPKQDDYETNDDMHDAFTRFCKYNKLHVLGSDTFSQTLRKDHGLK
                     KGRKTIEGKKKTIWEECKLVKWKNPRNYSQKTLMNEDNDAEEEEEQEQPPDRGGDGEG
                     EEKESREEKWRREQEEIAKWE"
     gene            complement(5648..5821)
                     /locus_tag="VLA74_10910"
     CDS             complement(5648..5821)
                     /locus_tag="VLA74_10910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51259.1"
                     /translation="MENIWPKSKRSLPILYERLEIWRLYASLAIMFHRRMELYINAGL
                     VSSSPRRNTNGIK"
     gene            complement(6123..6437)
                     /locus_tag="VLA74_10915"
     CDS             complement(6123..6437)
                     /locus_tag="VLA74_10915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51260.1"
                     /translation="MSKRIVNIELPAKVWEIIETQFKLNDESDSEILANIIKNHLASN
                     GYYLDADSLVHGIGLKEIVDVIDDKVMSLIDLLERKGLTTYQEWAQTMQERIIKNARS
                     FN"
     gene            6723..>7002
                     /locus_tag="VLA74_10920"
     CDS             6723..>7002
                     /locus_tag="VLA74_10920"
                     /inference="COORDINATES: protein motif:HMM:NF025113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51261.1"
                     /translation="MNWRNYNESLVKRGKVLLDFDVIDNWHVELEKMNKDKKRGRKFV
                     YPDSFIKVLGYMRAYFHLPYRQTEGVVRKHASHTLPSIPDYSRICRRIN"
BASE COUNT         2683 a         1012 c         1188 g         2119 t
ORIGIN      
        1 gtaattcttc ttatgaacaa aaggaggatt ataattatcc tcagtcacaa caatatcctt
       61 attctcatgc taataatttt tctgatcctc cttttaataa tgaaaataat aacatccaat
      121 cttttcccta ttcacctaat aattctgata tcacagaaac tagaacattc aatattgatg
      181 ataaaataag aatacaaaaa aaattaaaaa atttagaaaa ttctttcaac aaagtttatc
      241 ctaaacctgt tgttagtttg ataatgaaaa tattaaaaga tagatgttat cgcgaacaaa
      301 gtgatgaacc cttgaaaagg tatctagaaa agacaaatat gggatatctt tggcctgatt
      361 agaaatagat gggatatatt cttcccttat ttttaattct tataatttag gatgatttaa
      421 tgaaaaagaa tttattttat tccataggag atactcagag ggttcgtagc tcagccaggt
      481 agagcgtctg gctcttaacc agtcattatt gggttaaaat gtcgtgggtc cgaatcccac
      541 cgaacccgtt acggatttgc tactaatcct tatatagaag gtgacgatta tagacgatat
      601 ggaggacttt ggagacgctt ccagtcatga caatattctc gatcttacac cttacgaaaa
      661 ttttattttt gccttaaaat ctagcgaaac taggagacaa tatcccaaac ttttaaagat
      721 atttcttgat tttataaata tagataaatc taaacctatt gaagagagag ctgatgttct
      781 ttataaaatc tcaatagaaa atagaaaatg gcttgaaagt cagattttta gatacgttaa
      841 atattataga gaaaaggttg aaaaaaggga aatctctgcc ggaaccttaa agaattatct
      901 taaggttgtc aagttatttt gcagaatgaa tgaccttgaa gatcaaattc attggtacaa
      961 gataaaaatt ggaatgccca aagtaaagga atatgcagat gatagagcac ctactttaga
     1021 tgagattcga aaactagttg attatcctga tataagaata aaaccaatag tccatactat
     1081 gatgtcatca ggtattcgtt taggtgcatg ggattaccta aaatggaaac acattatacc
     1141 atatattagt gaaaaaaatg gagaaattct tggtgcaaaa ataattgtat atgctagaga
     1201 accagaagag tattactctt tcattactcc agaagcattc atctctttga aagaatggat
     1261 gcaattgagg gaaagacatg gagaaaatat aaccggtgaa tcatgggttc taagggatct
     1321 atgggaaaca tctaatacaa agtatggtga cctagataaa caggcatcaa atccatcaaa
     1381 attcaatagt actggagtaa aaaccatgct atctcgtgct tggcatcatc aaggtgtatg
     1441 gactgtacta aaagatgggg agaaaagaca tgaatttaag ttagcacatg gatttcgcaa
     1501 attctttgag acacaaactc agaaagtaat gaatcataat aatataaaaa ttttgatggg
     1561 acattccagt tctatgggtt tatcaaagaa ttattataaa cctacagaaa aagaggtatt
     1621 agaaaactat cttcatgcca tacatttatt gactgtgaat gaagaaaata aacttaaaaa
     1681 gaaagttaaa gaattaacag aaaaaagcaa agatgatgat tatattataa gatccaaatt
     1741 attagagaga gatgaacaaa ttaattcatt aagatcagaa ctgtgtacaa tacgtcaaat
     1801 agtagacaaa attatgagta gtccatagag ttcgttcaat aagtttgaat atctgtagac
     1861 ctttttcggg ttaagcataa atatcttcaa gatataacaa ataactcctt tacatacaag
     1921 aaaatagact gttattttat cttcgaaatt agaaaatatc tttagtattt attaacttta
     1981 caaaaaggtc atcactgtct atattatcag tattatcaag actgtctcaa catatgtgac
     2041 ctttagagat aacattaaat aaaacaaata acattattaa attgttgaaa aatattaaaa
     2101 agaaaagacc aaaacatact atagtgagtg atgaaaattt tgaacaacta cgaagatttg
     2161 gatatgcaaa cgattctatg aacgatgtaa ttaccaaaat attagaaaaa aataagtggt
     2221 cagaatctga tgagtctccc aactctagaa tcagattctg actgtaataa caaatcagag
     2281 tacttgtcat gattaattct gcatcatttg atataaattc tactaccact attgaaaata
     2341 gaaaaaacat cttttcagat gataaaatag aagaattagt tcagagagga ctaaacaaaa
     2401 ggttaggagc ccttcaacaa gagaaatgat atctaacacc actgcagtaa tgaatcaatc
     2461 tgctgatttc tggttttacg atattggtgt aaatgtcatt ctcgccaata caaaagataa
     2521 gaatactttt gagagttgga cagagtggca aaataaatca atatctgatg aagtacatga
     2581 atcacgtaaa aagaatggat attataataa tggaatagca attataccag gcccaatatg
     2641 gcgtggacct tataaaggca aatatttagt agcaattgat ctggacaata aaaaagcaat
     2701 agatgaattt gttggttctg gtttagaaga gttgaaacaa cagacacttg tcgagcgaca
     2761 tgctgatcca aataagatgc atatttattt tatcgtcgaa agagagatac caaataaggc
     2821 aagcgataaa gttgatattt caaaagctga aaagataaaa gcaaatgaga tcccagcctt
     2881 ggaagttaaa tctaactcta agggaattat gttttgttct acttcaccac atgctgacgg
     2941 aagtaattac cagatcatag gaacacgaaa accacaagtt ttcaatgctc aagatgtaga
     3001 aaatagaatt agccgtattt gtgataaata tggtattcta tattatgggt ttaatagtaa
     3061 taatggcaat aataatggca ataatattgg tccttctatc caagaattat ttactcctaa
     3121 aactaagatt cttaaaggtc acaataggca tttaggaatt ttacgagtca tggactcgtt
     3181 acttgtaaaa aatatgagtt ttttgagttt ggaacagata aagaaattag catatgaaag
     3241 aaatcaagat ctctgtgttc ctcctcttga tgacagagat atggagaggt tatggaacca
     3301 agccttagat tgggctaaca ggaaaattag agaaagagaa gaagcagcag caaagcagca
     3361 acaacagaat caacaacacg aacaagaaga aaaaggacaa aaaaataata ataccactag
     3421 gaccactaca aaaacaaaaa tcgaaaagca agaccttatt gaagaagcca cacgactggt
     3481 catgtccata catagatttc taactattga ggagacaaaa gagatcttgt tttatgataa
     3541 tgagaatggt gtttatgttt ctggtggaga agtattgata gaaaaagaat tagacaagat
     3601 atatagtttt aaacttagaa catcagatat tactgaagtt aaaaattatg tgatgaggaa
     3661 gacttacaca aaaagagaag agtttgactc tgatttagat atcataaact taaagaatgg
     3721 gttatacaat tggaggacag gcgaattctt ttctcatact ccagattatt attccttgaa
     3781 tcagaaaact tttccttaca atccagaagc aagaccaaaa ttatttatca aatttttgaa
     3841 ggaagtacta tatttacaag atattagaac agcagtagaa acaatcgcat atagttttat
     3901 cagaaagaat ctgtttgaac attacttcat attgataggt acaggagcaa acggaaagag
     3961 tgtattcatt ggtatcttga gcaatttgca tgggctcaaa aatataagca atgtatcttt
     4021 gcattcatta gtaaataata ggtttgcttt atcagacttg gaaaacaagg acattaacgt
     4081 ggacactgaa ctttcaagtg ctagtataaa tgacatgtct gctttaaaga aacttacagg
     4141 tacacagcca ttaaggatag aacaaaaggg aaaaccagcc tatgatacaa tcatttatgc
     4201 taaacaaatt ttcaatgcta atcagttacc cactacttca gataactcag atgcacatta
     4261 cagaagggag ataatcatat ccttcccacg acagtttgaa ggaaaaaatg aagaccccaa
     4321 cttgttgaac aaaatcataa caaatgaaga agaaatgtct ggaatattta acttggttgt
     4381 taattctatg agaacaattg tcaatagaaa taagatacat gtaaatgcgt caacaataag
     4441 ccaaagacga gcaaaggctg agttaacccg caatcctgtc aaagtgtttt tagatgaggc
     4501 tttatccaag gtcccaaaac aagacgatta tgagacaaat gacgatatgc acgatgcatt
     4561 tacgagattt tgcaaataca ataaattgca tgttttaggg tctgatactt tcagtcaaac
     4621 attgagaaaa gatcatggat tgaagaaggg aagaaaaaca atagaaggca aaaagaagac
     4681 gatatgggaa gaatgcaaac tcgtaaaatg gaagaaccca cgtaattatt cacaaaaaac
     4741 tctaatgaat gaagataatg atgctgagga agaagaagag caagaacaac caccagacag
     4801 aggtggagat ggagaaggag aagaaaagga atctagagaa gagaaatggc gaagagagca
     4861 ggaagagatt gcaaagtggg aataaacaag aataatatca ataataataa taattacagc
     4921 aagaagaata gtagtgtaat aatattaaca ttcagctgcc agaggacaaa gtggacacag
     4981 tggacaaccc tttactcagg taaaaaatag taaaaacaag cacaaaattg agtaaaaaac
     5041 gtcctttttt tgatagggtg gtgtccagtg acctttttac agacactgga cataggggat
     5101 tattctatgt tctacacttt ttgacaatca ttcaattttt agtatgtttg agtcattttc
     5161 gtgcgtaaaa tcagcattaa aaaacaagac aagacaagat ttgtaaaaaa tttttactgg
     5221 agtgaaggta tgtccacttt gtccagtgtg tccagtatta ttttttacag ctatatgata
     5281 ttcatttttt tattacataa caaatatact atgattatag tcagaaaaat aggcggaata
     5341 atgttccaga agaaaataag gggattgaac taccaggaat agttgcatta agactagata
     5401 gaaaattcat agtctagaaa aaaattatcg tacttaaatg gctaaagtat gtattatgaa
     5461 ctccatataa taatcataag aagaacatca aaattcatta ttggagtgaa tacttgtagc
     5521 tgccaattat gggtttattt agaactaaag agatttctag agaatcatcc tattccccaa
     5581 tcagaaaaat cagtttggct aatccctagt tctttctcca atttacgtat cctgatagca
     5641 tacagatcta ttttatccca ttagtgtttc tccttggcga tgacgaaacc aagccagcat
     5701 ttatgtaaag ctccatacgt ctgtgaaaca taatagccag ggaagcatat aatcgccata
     5761 tttccagcct ttcatataat atcggtaagg atctcttgct ttttggccat atattctcca
     5821 aaacttgtta tttgaaattc tatatctttg tgatctcatc tactacataa caatagaatc
     5881 tattgctaat aagctaacaa aaaaaactga cgataaagta aatttagttt agtttaaaaa
     5941 aagtttttta aagatagctt tgtagatatc ctcacataag ataccacatt ttaaaaactt
     6001 tttcctacaa tattttgtat gctaattagt atagctatac agaatcatat actatagaca
     6061 gttgtgactg tcataacgta tattattttt ttgttaaaga aaaaaattta ttcaatagtt
     6121 ttttagttaa aagatctagc attttttatt attctttctt gcattgtttg agcccattct
     6181 tgataagttg tcaagccctt tctttctaaa agatctatta gagacattac tttatcatca
     6241 atgacatcca ctatttcttt tagtccaata ccatgtacaa gactatcagc atctagatag
     6301 tatccgtttg aagctaaatg attctttatg atattggcta gtatttcaga atctgattca
     6361 tcatttagtt taaattgagt ctctatgatt tcccatactt ttgctggtaa ttctatattt
     6421 actattcttt tgctcattat tttacaaatt attatttgta cttgaagtgt ttatatcatg
     6481 ttttaataaa tttcttcttt atttctatat tctaagagta tgaagtgttt atctcttaaa
     6541 caacctttca ctgacctgtt agttcttgga gaaaaaagaa ttttttaatt aactgtaatg
     6601 attaaatatt cttaaataag atctggaaaa agacattcta gtttacatta ttataaattt
     6661 ctgctttgtt gcgtaattcc ctcttcctaa cacatttagc taacctattc tagtcatatt
     6721 atgtgaactg gagaaattac aatgagtctc tagtaaaaag aggtaaggta ttactagatt
     6781 ttgatgttat agataactgg catgttgaac tagagaagat gaacaaagat aagaagaggg
     6841 gtagaaaatt cgtatatcca gattcattta tcaaggtatt gggatacatg agagcatact
     6901 ttcatttacc atatagacag actgaaggag tagtacgaaa acatgcttcc cacacattac
     6961 cttcaattcc agattatagc aggatctgta gaagaataaa ca
//
LOCUS       DATIAS010000546         9472 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1053361, whole genome shotgun sequence.
ACCESSION   DATIAS010000546 DATIAS010000000
VERSION     DATIAS010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 9472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9472
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1053361"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1635)
                     /locus_tag="VLA74_10925"
     CDS             complement(<1..1635)
                     /locus_tag="VLA74_10925"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSF51262.1"
                     /translation="MFFSVLVLAFNFLFSEAMAASEKEVNEQRGIDNVCLKYDNITKT
                     IIVCDNNVEIPTIFSFFNNSNILESIGNKEWLLRSNILVLENGTLIIDGSKSKVIKID
                     SNYSSNIPYSITSRGNLIIDNTRITSWNSTSDSQPVVSSPETVRPYILTFWDSFGNTN
                     ITNSYLENLGYEGYVGTEGITYFSGKGSLISNNTISGNYLGLHLMNNVSDIAIENNDI
                     SKSNFEGIKLDTKTNNIKVFDNTIHENNLHAIACLRGCNLVDIKNNVLENNIGIGILV
                     DKQAKKVIIENNKIKSNTMGIMIAESEDNSINNNIIDKNGNGIFLKKSASNLITKNNI
                     TGSNNYGINIYSNSSLNTIKNNIIQKSMNSGINMADYGTKNNKFVENVIEGGLNHGIR
                     LDRTFKNNFESNVVDKNKNVDYYIKLSKDSILMNTYFNNTSILFFDKKSNLKIVNMDN
                     KLLDGNNVTNIAYTNNNTVIMLPIKNFTKLTTIDMYVVPNLSYVNISSINNDFSKNKD
                     YKKWNAAFAEPKMQTKFIVEGFDSGSQFLLKTNETVS"
     gene            1923..3128
                     /locus_tag="VLA74_10930"
     CDS             1923..3128
                     /locus_tag="VLA74_10930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51263.1"
                     /translation="MPIEAQEPVYKEKNGPPFNGVDMHGYYTRTSQARDVDNDLPANY
                     FEESFKILSSSGMNHVRFLVFWEAYAKNPVQFIEELKTVATTADKYKIHVLYDNHQFH
                     TSSYLNPQRGTGFPFSLFEGDFAFFYGSGGGTKYPTAKVWWSNWWDRNVHDKDGKDGW
                     TLQTEYFKTLVDTVDNHKSTIGYEILSEPQVHDKTQWSKIGKYNTFMTDFLRKSTSKT
                     LAYSMSIPVSLQSAIELSPINLAKMAPANTTNIIFKISVYGLPQGNTYQESRLGNFVQ
                     AAGLANVPLYIGEWNNVKRDKIIDEEGEIITFINETFSSINQTEADLMVATFKNLEVW
                     GSAFWQWRVDSHQVQNFNLINVTDDKIYTTEFFDIVRNAYQSVYGNATQSTNTTRVPV
                     TESQLILSG"
     gene            complement(3209..5113)
                     /locus_tag="VLA74_10935"
     CDS             complement(3209..5113)
                     /locus_tag="VLA74_10935"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018039278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HSF51264.1"
                     /translation="MRLLQLHADFIEYTPISKELKDAEDEIKLETKRLDNLVVAFVCI
                     EKYDDRQIIDKALNEIKNYLENIKVNRLLIYPYAHLSSDLASPKNAFEFIIELEKLAK
                     KIINNVERAPFGWTKSLNISVKGHPLAENFKIIDKSHDKIWIEVSDRSHVHEIEVVSS
                     ALKFEEKQESTWFILDMDGNLIPLDKFNYNNDGNFKKFIDYETAKRRIVDEQPPHVRL
                     MRKMGIADYEPASDPGNIRFYPKGRLMKSLIEQYVTKKVLEYGGIEVETPIMYDTKHP
                     SMESYFNRFPARQYNISSDNKTLFLRFAACFGQFLMAKDFHITYKNLPLKLYELTRYS
                     FRREKSGELVGLRRLRAFSMPDCHAFCKDMEQSKEEFLKRLDLSIDVISAFNLKIDED
                     IEMAIRFTEPFYIENRDFILQILKRFGKPILVEMWKERFFYFVLKWEFNFIDNLGKAA
                     ALSTDQIDVENGKRYNIEFVDESGAKKNPIILHNSPSGAVERVIYALLEKAAKIMHKG
                     ERPAFPLWLTHTQVRIIPIKKNHVKKSEEIEQIFAKNQIRADIDDREESVGKRIREAE
                     TEWIPFIIVIGDREVETSMVVVRDRTSSNQFESNLELLINKIKTEIQDKPFMPLNLPK
                     YLSKRPQILT"
     gene            complement(5144..5287)
                     /locus_tag="VLA74_10940"
     CDS             complement(5144..5287)
                     /locus_tag="VLA74_10940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51265.1"
                     /translation="MSESKGMMASDLNIISSSKRVYLCRNHYKEWKKATKEDRENERA
                     RWG"
     gene            complement(5451..6938)
                     /locus_tag="VLA74_10945"
     CDS             complement(5451..6938)
                     /locus_tag="VLA74_10945"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF51266.1"
                     /translation="MALISNKKQEMYRLVDSRIPEEITIITVIVALSVLLIFSILITF
                     SPGLFNHVSIVKPIETFILRVSEGVGFAAITYYQIIWIYIPLGLIGLWRWSIWIFKKS
                     SSLLYYPISNCNDEHLQKYSIITPVYNEDPTIFQDAIESWIQNKPDEIIGVIDHNDKK
                     CIEVFQRISIDKPFMKLIVIDKPGKRPALAEGIREARNKIVALVDSDTIWEKDIRNSI
                     LSPFKDPTIGGVTTRQHPIERRTIWQKITDIFWDMRNYYDLPAQTAMGQALSCLSGRT
                     SLYRKDIIEGSLDEFLNEIVLERKKESGEDKCLTRIVHSKGWKTYYQSNAVIYSYAAP
                     DFKTFWSQRLRWSRNSHNSDLVSLWDGWAWKHPFLAFHIIDRFISIFTLFFGPIFFGV
                     ALFMNQYILALSILALWMIGRGIKILPHLKRYPKDIALLPIYVVINFISAFVKLYALV
                     TIRDQKWIRSKNRKIGTSQLKNIKNLILTSEIISCLIFVVIYIIK"
     gene            7164..8042
                     /locus_tag="VLA74_10950"
     CDS             7164..8042
                     /locus_tag="VLA74_10950"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HSF51267.1"
                     /translation="MVKISIIGSGVVGSATGKGFSKLGHNVLFYDISKTRLDTLKKEG
                     YQIANNVKEALGHGQITFVCVNTPTGEDDEQDLSQVKSALFSITDALNYKENGRESLI
                     VFRSTMLPGTMKEVVVDYMDKHCKLQRGKNYNLCYNPEFLRQDTAYEDFFVPDRVIIG
                     EEFAGSSKLLQEIYKPLTEKIIVTSFAAAEMIKYTSNCFLSLKISFFNEIGMLCKELA
                     IDDKAVSLGVSLDKRIGKYGTMAGKPFEGACLPKDTKALSTFIKKRGWTPDLLKVTLD
                     INKKIEELVTKTAFTK"
     gene            complement(8193..9200)
                     /locus_tag="VLA74_10955"
     CDS             complement(8193..9200)
                     /locus_tag="VLA74_10955"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HSF51268.1"
                     /translation="MHDFFIDRIIKIKNKEELLSMIIEKSKFGGGSIRGVQTLEIEGG
                     NAVNVAFCLAKLGLDVHLFTIADNIGKKILLSLFKDLKNVKLRLFSGRPGYTTSLEFF
                     NSSSNELEANIMISDVGDNSDFGPDRFCRSTEKNILEAADAVIVLNWASNLKGTSLLE
                     YVFKNSPNAFHFIDPADIKSRRKEFCSLLRERGDIIDILSINENECNSLLLELNYGGL
                     ILKNHYDSKEIKLAAKTLAKNLKISVDLHTKNGSVFSDGKDIFFIESWRDIIIKSLTG
                     AGDSWDAADILGHLSGLNPNERLFFANMFAALYISQGDRQLITLANVIQFYNKIYKNK
                     S"
BASE COUNT         3072 a         1575 c         1355 g         3470 t
ORIGIN      
        1 agaaactgtt tcatttgttt ttaaaagaaa ttgactgcca gaatcgaacc cctctacaat
       61 aaattttgtc tgcatttttg gctccgcaaa ggcggcattc cattttttat aatccttatt
      121 tttggaaaaa tcattattaa tcgatgaaat atttacataa gatagattag gaacaacata
      181 catgtcaata gttgtcagtt tggtaaagtt tttaatgggt agcataatga ctgtattgtt
      241 atttgtatat gcaatattgg taacattatt accgtctaat aatttattat ccatattaac
      301 tattttgagg ttactcttct tgtcaaagaa taaaatagaa gtattattaa agtacgtatt
      361 cattaggata ctgtcctttg ataattttat atagtagtca acattcttat ttttatctac
      421 tacgttggat tcaaaattgt tcttgaaagt tctatccaat ctaataccat gatttaatcc
      481 accttcaatc acattttcaa caaatttatt attttttgtt ccataatctg ccatatttat
      541 tccactattc attgattttt ggatgatgtt atttttaatc gtatttaaag aagaatttga
      601 atagatattt ataccatagt tattacttcc cgtaatgtta ttttttgtta ttaaattact
      661 agcacttttt tttagaaaaa taccattacc gtttttatca atgatgttgt tattgatact
      721 attatcttct gactctgcta tcattatacc catggtattg gattttatct tgttattttc
      781 aataattacc ttctttgctt gtttgtctac gagtattcca ataccaatat tattttctaa
      841 aacattattt ttgatatcca ctaagttgca acctcttaga catgcgattg catgtaaatt
      901 attttcatgt atcgtgttat caaaaacttt aatattgttt gttttggtgt ctaatttaat
      961 accttcaaaa ttgctttttg atatgtcatt attctcaatt gcaatatccg aaacattatt
     1021 catcaaatgt aaacccaaat aatttccaga tattgtatta ttgctaatta aacttccttt
     1081 accagaaaaa tatgttattc cttctgttcc aacataacct tcatatccta gattctctag
     1141 gtaggaattt gtaatatttg tatttccaaa agaatcccaa aaggttaaga tataaggtct
     1201 aacggtttca ggagagctaa caacaggctg ggaatcactt gtagaattcc atgaagttat
     1261 tctagtatta tctattatta aatttcctct tgatgtgatg gaataaggta tattgcttga
     1321 ataattggaa tctattttta taactttaga tttcgaacca tcaataatta atgtaccatt
     1381 ttctaatact agaatattag atcttaacaa ccattcttta tttccaatgc tttctaggat
     1441 attcgaatta ttaaaaaaag aaaatatcgt aggaatctcc acattgttat cacaaactat
     1501 tattgttttt gtgatgttgt catatttcaa acaaacatta tctatgcctc tttgttcatt
     1561 cacttctttt tcgctggctg ccattgcttc cgaaaataaa aaattaaatg ctaaaactag
     1621 tacagaaaaa aacaaagaaa aatgtactag tctaacaatt agttgataag gcaattgtgt
     1681 tactaattta aaagtagtct gctatataaa tgacgttaca attgttaatc aggtttttcg
     1741 ctattttttt cccataaaat atttatagaa aaaaatgtaa ttgtagggat acatatataa
     1801 aaaaagtctt ccaagtatac tctgaaatat taatgtcagt aaataaatct aaatatgtgt
     1861 ttctactgct atttttttct attctacttc tatttaatat atgtattttt caaacaaagc
     1921 cattgccgat agaagctcaa gaaccagtat ataaagaaaa aaacggacct cctttcaatg
     1981 gtgtagatat gcatggatac tatacacgta cctcccaagc acgtgatgta gacaacgatt
     2041 tacccgcaaa ttactttgaa gaaagtttca agattttatc ttcatcaggt atgaatcatg
     2101 ttcgtttttt ggttttttgg gaggcgtacg ctaaaaatcc agtacaattt atcgaagagt
     2161 taaaaacagt tgcgaccaca gcagacaaat ataaaataca tgtattatat gataatcacc
     2221 aatttcatac ttcttcatac ctgaaccccc aaagaggaac tggttttccc ttttcattat
     2281 ttgaaggaga ttttgcattt ttttatggta gtggaggagg aactaaatat cctactgcta
     2341 aagtatggtg gtcaaattgg tgggacagaa acgttcatga caaggatgga aaggatggat
     2401 ggactttaca aacagaatat ttcaaaacgt tagttgatac agttgacaat cataaaagta
     2461 caattggata tgaaatttta agtgaaccac aagtacacga taaaactcaa tggtcaaaga
     2521 ttggtaaata taatactttc atgacagatt tcctaagaaa gagtacctca aaaactttag
     2581 catatagtat gagtattcct gtctctttac aaagtgctat agaacttagt ccgattaatt
     2641 tagcaaaaat ggcacctgca aacaccacaa atataatatt caaaataagt gtttatggat
     2701 tgccacaggg aaatacctat caggaatcta gactaggtaa tttcgttcaa gctgccggtc
     2761 ttgcaaacgt tccgctttac ataggtgaat ggaacaatgt aaaacgagat aaaataattg
     2821 atgaagaagg agagattatt acatttatca atgaaacatt cagtagtatt aaccaaaccg
     2881 aggcggatct tatggttgca acttttaaaa atctggaagt ttggggttct gcattttggc
     2941 aatggcgagt agattctcac caggtccaaa actttaacct aattaacgtt actgatgaca
     3001 aaatatatac tacagaattt tttgatatag ttagaaacgc gtatcaatct gtttatggta
     3061 atgccacaca gtctaccaat acaaccaggg ttccagttac tgaaagtcaa ttgatcctat
     3121 ctggatagat tttcatggtc acataaatct attttttatt atttgtttcc atattaggaa
     3181 aataaataaa taaaaattca aaaaatattt atgtcagaat ttgaggtctc tttgatagat
     3241 atttcggtaa gttcaatggc ataaatggct tatcttgtat ctctgtcttg attttattta
     3301 tcaataattc taggttggat tcaaattgat tgctgctggt acgatccctt acaaccacca
     3361 tagaagtttc gacttcccta tctcctatta ctatgataaa tggaatccac tcagtttctg
     3421 cttcccttat tctttttcca acagattctt ccctatcatc tatatcggcc cttatctgat
     3481 ttttggcaaa aatctgttcg atttcctccg attttttaac atgatttttt tttatgggaa
     3541 taattcttac ctgagtatgc gttaaccata atggaaatgc tggtctttct cctttgtgca
     3601 taatttttgc agctttttct aatagagcat aaattactct ttcaacagct ccactcggag
     3661 aattatgtaa aattatggga ttcttctttg ctccactttc gtcaacgaat tcaatattgt
     3721 atcttttgcc attttcaaca tcaatttgat cagtagatag ggccgctgcc tttcccaaat
     3781 tatcgatgaa attaaattcc cacttcaaaa caaaataaaa gaatctttcc ttccacattt
     3841 ctacaagtat tggttttcca aatcttttta ggatttgtaa aataaaatct ctattctcaa
     3901 tataaaacgg ttctgtgaat ctgattgcca tctctatgtc ttcatctatt ttcaaattga
     3961 aagcagatat tacatctata gacaagtcca atctttttag gaattcttcc tttgattgtt
     4021 ccatatcttt acagaatgca tgacaatctg gcatactaaa agccctgagt ctccttaatc
     4081 ctactaattc cccgcttttt tctcttctaa aactatatct agttaattca taaagtttta
     4141 gtggaagatt tttataagta atatgaaaat ccttggccat taaaaattga ccaaaacatg
     4201 ctgcaaatcg aagaaataat gttttattat ctgatgatat attatattgt ctcgcaggaa
     4261 atcggttaaa ataactttcc atagatggat gtttggtatc atacattatg ggagtttcta
     4321 cctcaattcc tccatattca aggacttttt tggttacata ttgttcaatc aaagatttca
     4381 taagtctacc ttttggatag aatctaatat ttcctggatc agatgcaggt tcataatctg
     4441 ctatacccat ttttctcatc aatctaacat gaggaggttg ttcatccaca attcttcttt
     4501 tagcggtttc atagtctata aatttcttaa aattaccatc attattatag ttgaacttgt
     4561 ccaaaggaat caaatttcca tccatatcta gtatgaacca tgttgattct tgtttttctt
     4621 caaattttaa agcagacgat acaacctcta tttcatgcac atgggaacga tcagaaacct
     4681 ctatccatat tttgtcgtga cttttgtcaa tgattttaaa attttctgcg agtggatgtc
     4741 cttttacact tatgttcaac gattttgtcc aaccaaaagg agctctttct acattgttaa
     4801 tgatcttttt cgctaatttc tcaagttcta tgatgaattc aaaagcattt tttggagaag
     4861 ctaaatcaga acttaaatgt gcatacgggt atattaataa tctattgact ttaatatttt
     4921 ctaaataatt ttttatctca tttagggcct tgtcaatgat ctgcctgtca tcatattttt
     4981 ctatgcagac aaaggctacg actaaattat ctaatctctt tgtttctagt tttatttcat
     5041 cttctgcatc tttaagttcc tttgaaatag gtgtgtattc aataaagtca gcatgtaatt
     5101 gcagtaaacg catattctgg aaaccttcta aatctctatc tttttatccc catctggccc
     5161 tttcattttc ccgatcttct ttggtagcct ttttccattc cttatagtga tttctgcata
     5221 ggtatactct cttgctcgaa gaaataatat ttagatctga agccatcata cctttgcttt
     5281 cactcatcga cctttcggca ttctcttcac agccttgaac actgcacttt atacccttgt
     5341 ttaccctacc cattctatat taaattattt ttgaaatata aaagctatac cgaattgtaa
     5401 tggaattctc ttctttttgc tttaaaactc gttagcaagt cttttgaaat ttattttata
     5461 atgtatatta ctacaaaaat taaacaacta attatttcag aggtcaatat taaatttttt
     5521 atatttttta gctgtgacgt tccaattttt cgattcttag accttatcca tttttgatct
     5581 ctgattgtta caagtgcata tagcttgacg aacgcactga taaagttaat cacaacgtat
     5641 attggtaaaa gtgctatatc tttgggatag cgtttaagat gcggtagtat ttttattcct
     5701 cttcctatca tccataatgc caatatcgaa agtgctaata tgtattggtt catgaaaagt
     5761 gctactccga agaagatagg accaaaaaat agagtaaaaa tagagataaa tctatcaata
     5821 atatgaaatg ccaaaaatgg atgtttccat gcccagccat cccataaact aactaaatct
     5881 gaattgtgac tatttcttga ccatcttagt ctttgactcc aaaatgtctt gaaatcagga
     5941 gcagcgtaag aatatatcac tgcattgctc tggtaatatg ttttccagcc cttgctatga
     6001 actattcttg taagacattt atcttctcca gactctttct ttctttctaa cactatctca
     6061 ttcagaaatt catccaaact accttcaatg atatcctttc tatatagtga agttctccca
     6121 gataaacaag ataatgcttg acccattgca gtctgcgctg gtaaatcata ataatttctc
     6181 atatcccaaa agatatcagt tatcttttgc cagattgttc gtctttcaat agggtgttgc
     6241 cttgtggtta cgcctcctat tgtgggatct ttaaacggcg ataatatcga atttcttata
     6301 tctttttccc atatggtatc actgtctact agagcaacta tcttgtttct tgcttctcta
     6361 ataccctctg ctaaagcagg tctcttacca ggtttatcga taacaatgag tttcatgaat
     6421 ggtttatcta ttgatattct ttgaaagacc tcgatacatt tcttgtcatt atgatctata
     6481 acaccaatga tctcatctgg tttattttga atccatgatt ctatcgcatc ttgaaaaata
     6541 gtggggtctt cattgtatac aggagttatt atgctatatt tctggagatg ttcatcatta
     6601 cagttactaa tgggataata aagtagtgaa gatgattttt tgaatatcca tatactccat
     6661 ctccataacc ctattagtcc taatggtatg tatatccata tgatctgata ataagtgata
     6721 gctgcaaaac ctacaccttc agataccctg agaataaatg tttcaattgg ttttacaatt
     6781 gaaacgtgat taaataatcc aggagaaaaa gtaataagta tagaaaatat gagaagtaca
     6841 gataaagcta caattactgt aataatcgta atttcttctg gtattctact atctactagc
     6901 ctgtacatct cttgtttctt attacttatt aaagccaatt ctaatttata tgtagatcga
     6961 aaaatttttc gtgatagaaa tatgaaaaag atgtcttagt atcttttttt tcatatttgt
     7021 tatatagata tttatattag tattttatag aacaatttat aaaagaattc cttctaacta
     7081 tctagaataa aaagagatcg tagtacttat atatccagat tatttaaatg gatttttgta
     7141 tatagagggt tgcgaaatta ataatggtaa aaatttcaat aatcggttct ggtgttgtgg
     7201 gatctgcaac tggcaaggga tttagtaagt tgggccataa cgtactattt tatgatattt
     7261 ctaaaacaag gttggataca ttaaagaaag aagggtatca gattgcaaat aatgttaaag
     7321 aagcattagg acatggtcaa attacttttg tgtgtgtgaa taccccaaca ggagaagatg
     7381 atgagcagga tttatcacaa gtaaaatctg ctttattttc tataacagat gcattaaatt
     7441 ataaagaaaa tggcagagag tctttgatag tatttagaag tacaatgttg cctggaacaa
     7501 tgaaagaggt tgttgttgat tatatggata aacactgtaa attacaacga gggaaaaact
     7561 acaatttatg ttataatcct gaatttctaa gacaggatac tgcctatgag gatttttttg
     7621 ttcccgacag agttattatt ggagaggagt ttgcaggtag ttcaaagtta ttacaagaaa
     7681 tttacaagcc tttaactgaa aagattatcg taacgagttt tgcagcagcc gaaatgataa
     7741 aatatacttc caattgtttc ttgtcgttga agatttcatt ctttaacgaa atcggcatgc
     7801 tctgcaaaga attagcgatt gatgataagg ctgttagcct tggagtgtca ttagataaac
     7861 gtataggtaa atatggaaca atggcaggaa agccatttga aggtgcatgt ctgccaaaag
     7921 atacaaaggc attgtctaca tttattaaaa aacgtggatg gacacctgat ttattgaagg
     7981 ttacattgga tattaacaaa aaaatagaag aattggtgac aaaaacagca tttacaaaat
     8041 aactttatta tttttgtgaa atacttttat atttaatgtt atgtattaac ttttcagact
     8101 ttaaatatgt ttaattattt aactttagat aaatatacta acatttgtga ccatgtcata
     8161 gacgaccgca aatatttatg aacaaatttc attcatgatt tatttttata tatcttatta
     8221 taaaattgga taacattagc caatgttatt aattgtctat ctccttgaga tatatataaa
     8281 gcagcaaaca tattagcaaa aaataatctt tcgtttggat taagacctga tagatgtcct
     8341 agaatatctg ctgcatccca tgaatctcca gctccggtca aacttttgat aattatatct
     8401 ctccatgact cgataaaaaa aatatccttt ccatcagaaa aaaccgatcc atttttagta
     8461 tgcaggtcaa cagatatttt taggttcttt gcaagtgttt ttgctgccaa tttaatttct
     8521 ttactgtcat aatgattttt taatattaga cctccataat ttaattctaa aagtaatgaa
     8581 ttacattcat tttcatttat actcaagata tcaattatgt ctccacgttc tcgtaataat
     8641 gaacaaaatt ctttccttct gctctttata tctgcaggat caataaaatg aaacgcatta
     8701 ggcgaatttt taaaaacata ttctaagagc gaagtacctt ttaaatttga ggcccaattc
     8761 aagacaatta ccgcatcagc agcttccaga atattttttt ctgtagatct gcaaaatcta
     8821 tcgggtccaa aatcactatt gtctccaaca tcgctaatca tgatattagc ttccaattcg
     8881 ttacttgatg aattgaaaaa ttctaatgaa gtagtatatc caggtctgcc agaaaataaa
     8941 cgtaatttta cattctttaa atctttaaat aaacttagta agatcttctt tcctatattg
     9001 tctgctattg taaacaaatg tacatcaagt cctaatttgg ccagacaaaa agctacattc
     9061 acagcatttc ctccttcaat ttctaaggtc tgaactcccc taatacttcc accgccaaac
     9121 tttgattttt caattatcat tgataagagt tcttctttat ttttgatttt tattatcctg
     9181 tcaataaaaa aatcatgcat tacaacaatc gatcttttct cttcttggta atcttttatc
     9241 tttttaaaaa gatttttagg atcacaaatt cttatgttta aacacccgtt ttttgttgtt
     9301 tatctattgt accaaaggac attatttttt aaatagtacc aattctatct ccaaaacacg
     9361 gaaattattc ccaatcccat gatagctagt cctccataca ccaaagagat aacatttaga
     9421 gtactagcac cgatagtcaa accaattccg gaagctatca ttaaaatttc ag
//
LOCUS       DATIAS010000547         3121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_780456, whole genome shotgun sequence.
ACCESSION   DATIAS010000547 DATIAS010000000
VERSION     DATIAS010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780456"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..473
                     /locus_tag="VLA74_10960"
     CDS             210..473
                     /locus_tag="VLA74_10960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51269.1"
                     /translation="MSNDISIVKNVIDIPQHKVSVPNDILLNQKQKDIGIAKNQEKFW
                     IVSSKISDFKNLKINLLDSNSSSKEESESEEKITKGDGHSNVI"
     gene            463..>3121
                     /locus_tag="VLA74_10965"
     CDS             463..>3121
                     /locus_tag="VLA74_10965"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HSF51270.1"
                     /translation="MSFNPSNLKSTLDFATAYIKNGFSIIPLHKKSKKPSIDKWDPFK
                     VSYPSKEQLEEWFSHNGNNIGLVTGRISAIFVIDVDGKKAYEYYINKIQSDRQLISAN
                     EHTMKIKTGSGNINIVFGFNPQDFSPNELRNLVLWRETDDNNGKRIVDEQDNNNHDHN
                     HSEIRLKGEGGYIVAPPSIHPNNNEYNLVNGIDPIILKREQIQKLIDLLSKDGFGRDK
                     KSTNSISQIVEILKPHYSNGRRNDLVLYLSGWLRKLGIPLETAEKIITELAKDDEEKG
                     TRIRTLHETYKKQDLNEIAGYSGLLKLLSYDCSEDDAKEKLTTVKEIIDKKFETNKNN
                     KKEKEEEIDILSLIKEDYCIALFVDQFNKPYIAIKIKEHVEILGIDNQRFKNWLFKVF
                     YKNTGDLSSEQVENVIKVLKSDAEFNENRKKLELRVAKAVMDDYTFYYDLTNSNWSTV
                     KITSQGWSIENNPPILFRRYSNHLPQVIPMRVLEKNENEYNVLDKFVDLLNVKDEDNK
                     LLLKCYVISLFIPGIAKPILMLHGEQGSAKSTLQELIKMLVDPSIVRTLTFPRDINEL
                     VQQLSHNYVAYFDNVSVIKEWISDTLCRGSTGSGFSKRQLYTDDDDIIYNFKRCIGIN
                     GINLGATKADLLDRGIIIQLERIPKERRRKLEDIWKEFESLRPQLLGYIFDILVKVLQ
                     IKQKSGITIPNGLNRMADFEEYAEIIARCMGYPEGEFLRVYQDNIDVQIDEAIQASPL
                     SMAVVELMDNKEDNDAEWNGTATELYIKLNEIAEATLKINIQKIKFWPKSANHLSRRL
                     TEVKTNLREKSIVIERYKDEKGYRKIKICKVSSISPYRQETQIQAQKPNKSLDDTLDD
                     TNKVSSNKNDENQAQNNDFGRYDSIDDTLH"
BASE COUNT         1299 a          405 c          551 g          866 t
ORIGIN      
        1 actatatggg ttagatgaac ctagccacgt aattgtagaa gggacaaaag atgggattct
       61 gattcgaaag ttggatattt aggagatgat aaggaattga aaatttttaa cttaaacaaa
      121 aataaaaaaa taaaaaaaga aatagattca ccaggttctt gcctcgttaa acagaaacct
      181 gatgaatcat ttttaggagc accatagata tgtcaaatga catatctata gtcaaaaatg
      241 ttatagacat accacaacat aaagttagtg ttcctaatga tatattacta aatcagaaac
      301 agaaggacat tggaatagca aagaatcagg aaaagttttg gatagtaagc tctaaaattt
      361 cagactttaa gaatctaaaa ataaatcttc tagactcaaa ttcatcatct aaagaagagt
      421 ctgaatcaga agaaaagata acgaaaggag atggtcatag taatgtcatt taatccatct
      481 aatttgaaat caactcttga ttttgctact gcttacatta aaaatgggtt tagcattatt
      541 ccattacata aaaaaagtaa aaaaccatct atagataaat gggatccgtt taaggtatca
      601 tatccttcaa aagaacaatt agaagaatgg ttttcccata atggcaataa cataggactt
      661 gtaactggta gaatatcagc aatatttgtt attgatgttg atggcaagaa agcatatgaa
      721 tattatataa acaaaataca atctgataga caattaattt ctgcaaatga acatacaatg
      781 aagataaaga caggttctgg caatattaac atagtatttg gatttaatcc tcaagacttt
      841 tctccaaatg agttaagaaa tctggtttta tggagagaaa ctgatgataa caatggcaag
      901 agaatagtag acgaacaaga taataataac catgatcata atcatagtga aataaggcta
      961 aaaggggaag gtggttatat tgtagctcct ccctcaattc atcctaacaa taatgagtat
     1021 aatttggtaa atggaataga tccaataatt ctgaaaagag aacaaattca aaaattaatt
     1081 gatttacttt ccaaagatgg ttttggtaga gataaaaaaa gtacaaatag tatttcacaa
     1141 atagtagaga tcttaaaacc tcactatagt aatggacgta gaaatgatct ggtattgtat
     1201 ctttctggct ggttgcgaaa gttaggtata ccattagaaa ctgcagaaaa gataataaca
     1261 gaactcgcta aagacgatga ggaaaaaggc actagaatta gaacattgca tgaaacatac
     1321 aagaaacaag atctaaatga aatagcagga tattctggcc tattaaagtt actatcctat
     1381 gattgtagtg aagatgatgc aaaagagaaa ttaacaacag ttaaagagat tattgataaa
     1441 aaatttgaga ctaataaaaa taacaaaaaa gaaaaagaag aagagattga tattctatcg
     1501 ttaataaaag aagattattg tatagcacta tttgtagacc aattcaacaa accatatatt
     1561 gcaataaaga taaaagaaca tgtagagatt ctaggaattg ataatcaaag gtttaaaaac
     1621 tggttattca aagtctttta caaaaatact ggcgatctga gcagtgagca agtcgagaat
     1681 gtaataaaag tattaaaatc tgacgcagaa tttaatgaga atagaaagaa acttgaatta
     1741 agagtagcaa aagcagtaat ggatgattat actttctatt atgatttgac aaacagcaat
     1801 tggagtacag ttaaaataac atcacaaggc tggtcaattg aaaataatcc acctattctt
     1861 tttagaagat acagcaatca tctaccacaa gttataccaa tgagggtctt agaaaaaaat
     1921 gagaatgaat acaatgtttt agataaattc gttgatcttt tgaatgtaaa agacgaggat
     1981 aataagttac ttctaaaatg ctatgtcatc tctcttttca ttcctggtat agcaaaacca
     2041 atcctgatgc tacatggaga acagggaagt gccaaatcta cattacaaga attgataaaa
     2101 atgctagtag acccaagtat tgtacgaaca ttaacatttc caagagatat caacgaactt
     2161 gtacaacagc tatctcataa ttatgttgca tattttgata atgtatctgt tattaaagaa
     2221 tggatctctg atacactatg taggggatcg actggaagtg gattttctaa aagacaatta
     2281 tacactgatg atgatgatat tatttataat ttcaaaagat gcataggtat taacggtatt
     2341 aatttaggag caacaaaagc agacttgcta gacagaggaa tcattataca attagaaaga
     2401 ataccaaagg aaagaagaag aaaattagaa gacatttgga aggaatttga aagcttgaga
     2461 cctcaattac ttggatacat atttgacatc ttagtaaagg ttttacagat aaagcaaaaa
     2521 agtggaataa ccattccaaa tggtctcaat agaatggcag attttgaaga atatgcagag
     2581 attattgcta ggtgtatggg atacccagaa ggtgaatttc ttagagtata tcaagataat
     2641 attgatgtcc agatagacga agcaatccaa gcaagtcctc tttcaatggc agtagttgaa
     2701 ttgatggata acaaagaaga taatgatgct gaatggaatg gaacagcaac tgagttatat
     2761 attaagctca atgagattgc agaagcaaca ttaaaaataa atatacaaaa aataaagttt
     2821 tggccaaagt ctgctaacca ccttagccgt agattaactg aagttaaaac aaatctaagg
     2881 gaaaaaagta ttgtaattga aagatacaaa gatgaaaaag gttatagaaa aataaagata
     2941 tgtaaagtat cgtccatatc gccgtatcgt caagagactc aaattcaagc acaaaaacct
     3001 aacaaatctt tggacgatac tttggacgat actaataaag tatcgtcaaa taaaaatgat
     3061 gaaaatcaag cacaaaataa cgattttgga cgatatgaca gtattgacga tactttacat
     3121 a
//
LOCUS       DATIAS010000548         2194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1190268, whole genome shotgun sequence.
ACCESSION   DATIAS010000548 DATIAS010000000
VERSION     DATIAS010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190268"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VLA74_10970"
     CDS             <1..291
                     /locus_tag="VLA74_10970"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSF51271.1"
                     /translation="NHDESVFTDPERFDITRKNLRHMAFGTGIHFCLGAPLARLEGEI
                     ALRILLERFDKLEFDFDYSDKQDLYTKVTPLKSSLFLGLSHLPIRFQTKNRQ"
     gene            complement(522..956)
                     /locus_tag="VLA74_10975"
     CDS             complement(522..956)
                     /locus_tag="VLA74_10975"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51272.1"
                     /translation="MKKYEQLVKKISLVVLSIILIGLTTSLMIFYFATPQIKHIYQHD
                     RSIGIDYNQIFATLSNPTSIAADSAGNVYVLDHGTEAVQKFTTDGTFVKEWDVQRTKA
                     SQLFPTAIAADSAGNVYVIDAGSNIVQKFTTDGIFVKEWNIN"
     gene            1572..2078
                     /locus_tag="VLA74_10980"
     CDS             1572..2078
                     /locus_tag="VLA74_10980"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSF51273.1"
                     /translation="MKVGLVVPQFGINATKENLMRFIHLAEKEDFESLWVYDRMLYPL
                     DPQPPYPYSGPPDMSEWPEHFKNVLDPLTTLAFIAANTTKAHLGTCIIDMVFHNPITL
                     AKEFTTIDILSGGRVICGFGIGWSKHEFLASNIPYEKRGERANEILQVIKRVWTDGGC
                     CLIQFNNR"
BASE COUNT          798 a          311 c          327 g          758 t
ORIGIN      
        1 aaccatgatg aatcagtatt tacagatcct gaaagatttg atattactcg taaaaactta
       61 cgccatatgg cttttggaac tggaattcat ttttgtttag gggctccttt agctagactt
      121 gaaggagaaa tagcattaag aatacttctt gaaagatttg ataaacttga atttgatttt
      181 gactatagtg ataaacaaga tctatatact aaagttactc cactcaaaag ttctcttttc
      241 cttggattat cacacttgcc aatacgtttc caaactaaga ataggcaata ataaaattag
      301 attagtatat ctttattcag tttttatatc tttgtaataa agaatgtttg catatccaat
      361 aatgttaatg ttaaggataa tagtaacaat agtttgacaa aaaaattata gagaagataa
      421 aattattttg gaaaaggatg attattacta attataaaat ctactgctct ttgtcctact
      481 ctatagaaga aattcataag ccaataaaat aaatattcta actaattgat gttccattct
      541 ttaacaaaga taccatcagt cgtaaacttt tgtactatat tacttccggc atcaataaca
      601 taaacatttc ctgcactatc agccgctata gctgtaggaa ataattgtga tgcttttgtt
      661 ctttgaacat cccattcttt aacaaatgta ccatcagttg taaacttttg tactgcctca
      721 gttccatgat caagtacata aacatttcct gcactatcag ctgctataga tgtaggattt
      781 gaaagggttg caaagatttg attataatct attccaattg atctatcatg ttgataaata
      841 tgttttattt gtggagttgc aaaataaaaa atcattaaag aagtagttaa tcctattaat
      901 attattgata atacaactaa agatattttt tttactagtt gttcatattt tttcatttaa
      961 attaacatct actgaattag ttacaatgaa aattatataa acattgattt caaaatactt
     1021 tggataagag atgcagatat tccatttttc ttttctgtat ttgatataac tgatttatca
     1081 ttgataatct agtagattaa caataaaaaa tattaactgg tcccacttta tagaagggtt
     1141 caaatcccac tggccccata gtatataaat attttgatat tacatattgg tagattaata
     1201 atagataaag taaagttaaa ctagccaggc tagcaactgt tgatcctcag aataatcaac
     1261 cttatgttct accagtaatg tttaatttta gtggtaacaa tatattcatt tcaataaatg
     1321 acaaatctaa aaattaagaa attcaaacca atcgaaaaga gtaaaaaata tgcaaagata
     1381 tcccaatatt tcttttctac attgttatcc aaaaaatatc agcaatataa aaaaaatggt
     1441 agtagaaatc ggagatagtt gcattgttat tgatattcaa aataactaaa gctgaaaata
     1501 ttccaattaa gaaaaataga taccaatatt gatgatatta tatctttata gtataaaaat
     1561 caataagaga tatgaaggta ggattagttg ttcctcaatt tggtataaat gctactaaag
     1621 aaaatctaat gagatttata catttagcag aaaaagaaga ttttgaatca ctttgggtat
     1681 atgatagaat gttatatcct cttgatcctc aaccaccata tccatattct ggtcctccag
     1741 atatgagtga atggcccgaa cattttaaga atgttttaga tccattaact accttagcat
     1801 ttatagcagc taatactaca aaggcacatt taggaacctg tattattgac atggtttttc
     1861 ataatcctat aacacttgcc aaagaattta ctacaatcga tattttatct ggaggtagag
     1921 tgatttgtgg ttttggtatc ggatggtcca agcacgaatt ccttgcatct aatatcccgt
     1981 atgagaaaag aggagaacga gctaacgaaa ttcttcaagt tattaaaagg gtatggacag
     2041 atgggggttg ttgcctaatt cagtttaaca atcggtaaat agaatttcat gatttttgtt
     2101 ttagtttaga aagggtatgt tcccttgtga gtatcaaaca caagagaaaa gatggttact
     2161 ggttgtatta ccatctagcg cataccgtag aacg
//
LOCUS       DATIAS010000549         2259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1462082, whole genome shotgun sequence.
ACCESSION   DATIAS010000549 DATIAS010000000
VERSION     DATIAS010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462082"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            316..903
                     /locus_tag="VLA74_10985"
     CDS             316..903
                     /locus_tag="VLA74_10985"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSF51274.1"
                     /translation="MAEPIKAAIITFDDGMLSQYTYAKPILDKYNFKATFYIICNNVD
                     KENRMNWNNIHILEEEGHEIGSHSMNHKKLGKLSDEEIKYEIIESKRCLQENGFDVIS
                     FSFPYNDGDNNKKILKIVADNYYIARTASKPLMLFECKELQDESFMDYNNKYENECHY
                     SDKNNENEYFKRYTITGLSHEAYKKAGGYSDDEMY"
     gene            complement(1494..2183)
                     /locus_tag="VLA74_10990"
     CDS             complement(1494..2183)
                     /locus_tag="VLA74_10990"
                     /inference="COORDINATES: protein motif:HMM:TIGR03709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPK2 family polyphosphate kinase"
                     /protein_id="HSF51275.1"
                     /translation="MHKNFIDSLLVKPNTKIRLNNWNPNSLELLDKEEAERILNQNLM
                     NQMTNLQYKLFADKSQSLLIILQGLSAAGKDSTIRNVMGAFNPQSCRAIPFKAPSEEE
                     LSHDYLWRIHKLIPAEGEITIFNRSHYEDVIEVRVRKLVSKSIWSKRYTQINEFERYL
                     HENNIKIIKLFLHISKDEQKRKLEERMRNPQKQWKITESDITEPTYYEQYMEAYEEAL
                     GNVVLNGLHGI"
BASE COUNT          817 a          294 c          306 g          842 t
ORIGIN      
        1 ataattccag taataacaag agagttaagc agataaaaga aagtgttacc catattggta
       61 agtgaatctg ttacctatct atgcaagtac aacaattaac tacatataat ttaatagtaa
      121 attataatgg taaatggaat aggatatttt tactcaataa tatataacat aaaatgacat
      181 tataacttta gataatcatt taaagtaata tctaaatatc ttatacgttt gaatttttta
      241 ttgtattatt taaccatatt tatattttta atgataatac tattatcctc ttattctatt
      301 ctaatttctt attccttggc tgaaccaatt aaagcagcaa ttataacatt tgatgatgga
      361 atgttaagcc agtatactta tgcaaaaccc attctagaca aatacaattt taaggcaaca
      421 ttctatataa tttgtaataa tgtagataaa gaaaatagaa tgaattggaa taatatccat
      481 atactggaag aagaaggaca tgaaattggt tctcattcta tgaatcataa aaagttgggg
      541 aaattatctg atgaagaaat aaaatatgaa attattgaat ccaaaagatg tttacaagaa
      601 aatggatttg atgtaattag tttctcattt ccatataatg atggagataa taacaaaaaa
      661 atactaaaaa ttgttgctga caattactat attgctcgaa ctgcttctaa accacttatg
      721 ctatttgaat gtaaagaact gcaagatgaa agttttatgg attataataa caaatacgaa
      781 aatgaatgtc attattcaga taaaaataat gaaaatgaat attttaaaag atatacaata
      841 actggactga gccatgaagc atataaaaaa gcaggtggat attctgatga tgaaatgtat
      901 taacaattta tagacattgt agaaagtcaa accaaataca atactgaaaa tacaattgga
      961 gcaattccta ttctcattta ccatagtgta gattactctc atgatgatta taatataagt
     1021 ccagatttat ttgaaaaaga aatggaatac ttgttagaaa atgggtataa aatttttcag
     1081 atgaaagata ttatatataa tgatgaagga ttacatatta aaggatattg attttagtca
     1141 gttttcctat caagagataa tgactatcga ttattttaca tgatagttat atttaataac
     1201 aaaatctctt aatattatgt tacctaactc tgatataatg agaaatcgaa gtcgtctaaa
     1261 cttatagcta cttgatttaa taaactaata atttaaatag tatttatttt taggctttta
     1321 tcttatttaa taactataat gttagacaat atttgactaa tattaatcat tattctttga
     1381 taaattgaat atatcaaatt ttggctttgg aatttttaat ttcatgcttt caagagtatt
     1441 gactataatc ttttccactg caaaatttct caaccatttt gtatctgcag gaattatata
     1501 ccatggagcc cattcagtac tacatttcca agagcttctt cgtatgcttc catatattgc
     1561 tcataataag tgggttcagt tatatcgctt tctgtaattt tccattgttt ttgaggattt
     1621 ctcattctct cctccaattt tctcttttgt tcatctttac ttatatgcaa aaataatttt
     1681 ataattttga tattattttc atgtaaatag cgttcaaatt cgttaatctg tgtatacctc
     1741 ttagaccaaa tggattttga taccaattta cggaccctta cctctataac atcctcataa
     1801 tgagagcgat taaatattgt tatttcacct tctgcaggga ttaatttgtg tattcgccac
     1861 aagtaatcat gggaaagctc ttcttcactt ggagccttga acggtatagc tctacaactt
     1921 tggggattga aagcacccat tacatttctt atagtactat cttttccagc tgcagatagc
     1981 ccctgcaaaa ttattagtaa tgattgactt ttatctgcaa aaagtttgta ttgcaaattt
     2041 gtcatttgat tcattagatt ttggtttagt attctttcgg cttcttcctt atctagtagt
     2101 tctaaggaat ttggattcca attatttaga cgaatcttag tattcggttt gactaaaagg
     2161 ctatctataa agtttttatg catttataat atcaattaat ttgaatgaat taaagataag
     2221 tgttttttta ataaattaaa aatgatgatt ctcatagat
//
LOCUS       DATIAS010000550         2426 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2007867, whole genome shotgun sequence.
ACCESSION   DATIAS010000550 DATIAS010000000
VERSION     DATIAS010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2007867"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..1953
                     /locus_tag="VLA74_10995"
     CDS             208..1953
                     /locus_tag="VLA74_10995"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HSF51276.1"
                     /translation="MTRHDDTRRIRREAADIAFNRPHFGPEPHPIPNPEENTFPTTRI
                     ANYSKGLKRENNDIIVDHDAYQSLLDALDTGDPADFEKIVLDMGFGMPPAQRGNKKLT
                     NPLAGLAFDLEGPDGHAIALLKKNATKLDDPNSYEPFPSHPLLETDETAGEMVELYWM
                     ALLRDIDFKDYSNNDLVKEASEELSNLSDFKGPKDNNGKVTPRTIFRGFAQGDLEGPY
                     ISQFLLRGNQDDVLGRDEGDGWVKYGTTSIDQKHVVAVKGKDFGTTLKAWIAIQKGEN
                     RDLDPLYKGKKGDKRKLEFFFDRNLRFIRNARDLATYVHYDALYQAYLTACLYLLRKM
                     DFEGAKKMLNPGNPYIDLKKTDGFGTFGGPHILSLVCEVATRALKSVWYTKWFLFRRL
                     RPEAYGGLVHLVKDPVPNINLNVQLPTDVLDSKVIKKIKKYNERQNMKFDGMPKDGTY
                     LLPLAFPEGSPTHPSYGAGHATVAGACVTVLKFWFNEKYEFEEIYIPKENGRKLEKKV
                     KKLTLLGELNKLAANIAIGRNMAGVHWRSDYTQSLRLGEAIAIGILQEQKITYKEMFK
                     NSFEFTRFDGTKVSI"
BASE COUNT          899 a          341 c          426 g          760 t
ORIGIN      
        1 ctgctatcag atttgagaac atgataaagg aaatgatgct aaaagcatct ttgtataacc
       61 tgtttcaaac tataaccata aaatgactat atattgttag aataaaaatt gttattcata
      121 tgatttaggc aacagagcaa taaaatatgt tatcaaaaca aaatataatt acaatttgaa
      181 taatgatatt atctatggag tgattttatg acaagacacg atgataccag acgaataaga
      241 agagaggctg cagacattgc atttaataga cctcattttg gacctgaacc tcatcctatt
      301 cccaatcctg aagaaaatac ttttccaacc actcgtattg caaattattc aaaaggatta
      361 aaacgtgaaa ataatgatat tatcgttgac catgatgcat atcaatcatt attagacgct
      421 ttggatactg gggatccagc agattttgag aagattgtat tagatatggg ttttggtatg
      481 cccccagccc agcggggaaa taaaaagctt acaaatcctc ttgcaggatt agcatttgat
      541 cttgaaggtc cagacggaca tgctatagca ttgttaaaga aaaatgcaac taagttagat
      601 gatcctaata gttatgaacc ttttccatcc catcctcttt tagaaacaga tgaaactgct
      661 ggggaaatgg tggaattata ctggatggca cttttaagag acatagattt taaagactat
      721 tcaaataatg atttagtaaa ggaagcatca gaggagttat ctaacttgtc agattttaaa
      781 ggtccaaaag acaataacgg aaaggtaacg cctagaacaa tattccgtgg ttttgctcaa
      841 ggagacttag aaggacctta tatctctcaa tttctactca gaggaaatca agatgatgta
      901 ttaggaagag atgaaggtga tggatgggta aagtatggaa caacttctat agatcagaaa
      961 catgttgttg ctgtaaaagg taaagatttc ggtacgactt tgaaagcatg gattgcaatc
     1021 caaaaaggag agaatcgaga tttagatcct ttatataagg gaaaaaaagg agacaaaaga
     1081 aaactagagt ttttctttga tagaaattta agatttataa gaaatgctcg tgaccttgca
     1141 acatatgtac attacgatgc attgtatcag gcttatctta cagcatgtct atacttatta
     1201 agaaagatgg attttgaagg agcaaagaaa atgttaaatc ctggaaatcc ttatatcgat
     1261 ttaaaaaaga cagatggttt tgggaccttt ggaggtccac atattctttc tcttgtttgt
     1321 gaagttgcaa caagagctct gaaatcagtt tggtatacta aatggttttt attccgccgc
     1381 cttcgtcctg aagcttatgg aggtttagta catttagtaa aagatccggt accaaatatt
     1441 aatcttaatg tacaattacc tacagatgta cttgactcta aagtaatcaa aaagattaaa
     1501 aaatataatg aacgacaaaa tatgaaattt gatggaatgc caaaagatgg aacttattta
     1561 ctgccattag cttttccaga aggttcacca actcatccat catatggtgc aggccatgca
     1621 actgtagcag gagcttgtgt aacagtatta aaattttggt ttaatgaaaa gtatgaattt
     1681 gaagaaattt acattcctaa ggaaaatggt agaaaattag aaaaaaaagt taagaaattg
     1741 acactacttg gtgagcttaa taaattagct gctaatattg caataggaag aaatatggca
     1801 ggtgttcatt ggagaagtga ttatactcaa tcacttaggt taggagaagc tattgctatt
     1861 ggaatattac aagaacaaaa aataacatat aaagaaatgt ttaaaaactc atttgaattt
     1921 acaaggtttg atgggacaaa agtctcaatc taaatatttt taaattttta caaaatcatt
     1981 agttcttcta aaactttttt ctctacctaa catttcattg gtaaccaata aaaagatgtt
     2041 taaaaatact ggtttatctg atccaaaaat aaattctttt aatcaatgtt ataaatatct
     2101 tttaaatcat atgtttagtc tattgagtta ttaaaaagct aaatacaagt tagtagtagt
     2161 agaactctac tatatcgacg acactactcc ctttgagata attgcaaaac tgatactaat
     2221 ttaccaagag ttatacaata caattaactt taagatatta taaaatgaag agatttaatt
     2281 ttccgactaa gagcctatcc gaaaagtagt ttatagtttt taagtttatg gtacaataga
     2341 tttattcgac aaagctaagt gtttctacac tatatatcac gagattagtt tgatatctga
     2401 aatttctgga atcgattcat cttatg
//
LOCUS       DATIAS010000551         2949 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_508762, whole genome shotgun sequence.
ACCESSION   DATIAS010000551 DATIAS010000000
VERSION     DATIAS010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508762"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VLA74_11000"
     CDS             complement(<1..224)
                     /locus_tag="VLA74_11000"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HSF51277.1"
                     /translation="MNIKEGLTFDDVLLIPKRSPIISRSQTNLKTRLSRNINLNIPII
                     SANMDTITESAMAVALAREGGIGIIHRFMT"
     gene            complement(348..1202)
                     /gene="folP"
                     /locus_tag="VLA74_11005"
     CDS             complement(348..1202)
                     /gene="folP"
                     /locus_tag="VLA74_11005"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HSF51278.1"
                     /translation="MPYIGDVPISKNSIKIMGIVNVSPESFYKKSIKTSIDEISSYAK
                     KLENDGADIIDIGAMSTAPYLDTMISLDDEIVRLTKAIKIIKENCKLPISVDTPRSIV
                     AEEAIKMGAHAINDVCGLKYDHKMAEITSKYNIPIIIGAYEKNSHKLLKGKSFSTKKI
                     LSDSITIAQKAGIKKTNIIIDPSIGFFRNESNNPFFTKITKIPWYLRDIEIVSNLKEL
                     STLSLPICISVSNKSFLGKLLNLTIDERLIPSLIMEVIAIINGATLIRTHNVKETMLA
                     LNTLQLIY"
     gene            1326..2330
                     /gene="dph2"
                     /locus_tag="VLA74_11010"
     CDS             1326..2330
                     /gene="dph2"
                     /locus_tag="VLA74_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043364 - glycyl-radical enzyme activating
                     activity [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthamide biosynthesis enzyme Dph2"
                     /protein_id="HSF51279.1"
                     /translation="MISIDEDKIFEVIKKRKPASIALNGPEALFPKMQETGKKVMELF
                     DIPAYIIGDTCWGSCDLNTHAADMLGVDLLFNIGHTISIETFDKKVIMINAYDDVKFD
                     TIVEKFAKEMTNREYKTFGIVTDSQHLDQIQSSKKILENSGFNIVIGDGKGQLNDGQV
                     FGCEFYPTYNIQKRIDAYVFLGQSIFHSVSIAMSTEKPTFMLDPYFNEFQQVNDKART
                     MEKKAILSIYKAQEAKKIGIIIGLKEGQFAKIKALNLKKSLEAFEKEIQLFALTEITE
                     ERLRNFKGIDAFIQVACPRIAIDNHFSRPLLSVPQAEALIKVLKNEPIDDFLRLRHWL
                     "
     gene            complement(2758..>2949)
                     /locus_tag="VLA74_11015"
     CDS             complement(2758..>2949)
                     /locus_tag="VLA74_11015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00269 family protein"
                     /protein_id="HSF51280.1"
                     /translation="EFFNSLEENRSGVKYNTYNSILKISKILKNMDNSLKNKCNICGH
                     ESTRPVCSVCNNLKILKND"
BASE COUNT         1040 a          418 c          425 g         1066 t
ORIGIN      
        1 attgtcataa atctatgtat aattccaata cctccttctc ttgctaatgc tactgccata
       61 gctgattcag ttattgtatc catattagca ctaataatag gaatatttaa attgatattt
      121 ctggataatc ttgtttttaa attagtttgg gaccgagata taattggaga acgttttgga
      181 attagtaata catcgtcaaa agttagacct tctttaatat tcaatatttc attttattat
      241 taaaataaag aagaattata agttttgcat cattctaaag ttaataacta atgaaccttt
      301 aaattgacaa gttttaaatt ttataataga aaaaatatag aataatacta atatatcaat
      361 tgcaaagtgt ttaatgctaa cattgtttcc ttaacattat gggttctgat aagagttgca
      421 ccgttaataa tagcaataac ttccattatt aaggatggaa tgagtctttc atcaattgtg
      481 agattcaata gttttcccaa aaaagattta tttgaaaccg aaatacaaat tggcaaagag
      541 agagtagaaa gttccttcaa attagataca atttctatat ccctaagata ccacggtatc
      601 tttgttattt ttgtaaaaaa aggattatta ctttcatttc taaaaaaacc tattgatgga
      661 tctattataa tattagtttt cttaattccg gctttttgtg cgatcgttat actatcacta
      721 aggatttttt ttgttgagaa agacttgcct tttagaagtt tatgagaatt tttttcatat
      781 gctcctatta ttataggaat attatatttt gaggtgattt ctgccatttt atgatcatat
      841 tttagtccac aaacatcatt tatcgcatgt gctcccatct ttattgcctc ttctgctact
      901 atggatcttg gagtgtctac agatatagga agtttacaat tttcttttat tattttaata
      961 gcttttgtta atctgactat ttcatcatct aaagaaatca tagtatcaag atatggagcc
     1021 gttgacattg cacctatatc aataatatct gctccatcat tttctaactt ttttgcataa
     1081 gaagaaatct catcgatact ggtttttatt gacttcttat aaaaagattc tggactgaca
     1141 tttactattc ccataatttt tatagaattc ttactaatag gaacatctcc aatatatggc
     1201 atttttcatt ctatagaata tatctctatt attattgttc taaatatata tagtcaattg
     1261 agaatgttaa taaataactg gaaaaataat attggagaga ttatgaagtt taatgtgatt
     1321 gttgattgat ttccatcgat gaagacaaaa tctttgaagt aatcaaaaaa agaaaacctg
     1381 catcaatagc actaaatggt cctgaggcct tattcccaaa gatgcaagag acaggaaaaa
     1441 aggttatgga actgtttgat attccagcct atattatagg tgatacttgc tggggatcct
     1501 gtgatctcaa tacccatgct gcagatatgc ttggtgtaga tttgttgttt aatattggtc
     1561 atacaatttc tatagaaact tttgataaaa aagtaattat gatcaatgca tatgatgatg
     1621 taaaattcga tacaatagta gaaaaatttg ctaaagagat gacaaatcga gaatataaaa
     1681 cattcggtat agttacagat agccaacatt tagatcaaat acaatcatca aaaaaaatac
     1741 ttgagaattc cggttttaat atagtaattg gcgatggtaa aggacaatta aatgatggtc
     1801 aagtttttgg ctgtgaattt tatccaacgt acaacataca aaagagaatt gatgcttatg
     1861 tttttttagg ccaaagtata tttcattctg ttagtattgc aatgtcaaca gaaaaaccta
     1921 cttttatgtt ggacccatat tttaatgaat ttcaacaagt aaatgacaag gcaaggacta
     1981 tggaaaagaa ggctattcta tcaatatata aagcacaaga agcaaaaaaa attggaataa
     2041 tcataggatt aaaagagggt caatttgcaa agataaaagc cctaaattta aaaaaatctc
     2101 ttgaagcctt tgaaaaagaa atacaattat ttgcattaac agaaattact gaagaacgat
     2161 taagaaattt caaaggaatt gatgctttta ttcaagtagc ttgtccaaga atagctatag
     2221 ataatcattt tagtagacca ttactttctg taccacaagc tgaagcatta atcaaggttt
     2281 taaaaaatga acctattgat gatttcttaa ggctacgtca ttggttataa aaattaagcc
     2341 tatcatattt taaattagtt tttatagcct agactttcgt aaaattatca ttatatcaat
     2401 gcgaagtcaa cagcctatta gaatcagctt ggctaaaaat ctcaatctcg tatattatat
     2461 aatctaccac gtagacaaac tagcttggtt atgttacctt agattgattc ctctaggatc
     2521 actcatttcg agaattaaca gtcaagacta catatacatt cgactagttt gttggtcata
     2581 tccatccagt tcggcataat ttcattcaat ttgatagaca gagacttcta tttagcgatt
     2641 atctaatagt tactgattct agcataaagc ctattcccag agaagatgac agctagcaca
     2701 ttcgttcttc catgtctatg caatttttat tttaccatat tatattatat ttgtctatta
     2761 atcatttttt aaaattttta gattgttaca aacggaacaa actggtctag ttgattcatg
     2821 tccacaaata ttacatttat ttttcaagga attatccata ttttttaata ttttggatat
     2881 tttcaaaata gaattatatg tattatattt aacaccggac cgattttcct ctaaagaatt
     2941 aaagaattc
//
LOCUS       DATIAS010000552         3381 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_237206, whole genome shotgun sequence.
ACCESSION   DATIAS010000552 DATIAS010000000
VERSION     DATIAS010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237206"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(308..829)
                     /locus_tag="VLA74_11020"
     CDS             complement(308..829)
                     /locus_tag="VLA74_11020"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF51281.1"
                     /translation="MVRYTALRDITDKEKNRLYSLLDTNQEIKYRIKIVLLASEGYTV
                     PEIREMTNIYDRTIRKWIHKFNDNGIEALFTKIDYSPMVKIDNDDARKQIIKIASTNP
                     RDLGLKFSTWSLRSLAAGYLTRDKKIVKQGISHTRIKEILNESKIEWRNSKTVLGKNR
                     DPEYELKKIGLKN"
     gene            complement(1506..1919)
                     /locus_tag="VLA74_11025"
     CDS             complement(1506..1919)
                     /locus_tag="VLA74_11025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51282.1"
                     /translation="MSDNIEEKRANLRKSKKHREWRRNKVKEMLTRGYAQYEIANTLH
                     ISQPTISRDIHYLQKEIYKNKKNYGERLFEVYQNSLEGLDEVIKKLWTIIDSSKADEK
                     ERMNAIKLIMQCYRTRFEMIQTEPELVKLNRPMRY"
     gene            2359..>3381
                     /locus_tag="VLA74_11030"
     CDS             2359..>3381
                     /locus_tag="VLA74_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51283.1"
                     /translation="MSLRQIAEKQQPIENNDKKDYKRYGWKNVAIKIKENDLILFNRQ
                     LDKLGIETLGDLVKDLLAGKITRLTEDKQIEIMKTNSQGSGQYTLQPETNYDFYKKID
                     IGDLLKEYEKRYHPKTAKCLVSYFRRYADIFFGINPDVPLFRLKPHKRSWILQAMKRI
                     GDYYFWKYNSRDIQDLVKRIIERYYLNKDLDMKDKIYLVNPGYIINKLTSLMVIPGHI
                     GFIVKVGLFTGLREEELYYIYNKEICNNELGCKCNNLHVINLDNKMTIIGINWIRANK
                     KAFVTILPTVVWKDFRNLPKFDRSDIIAAHSITKRDAEILYVGLRKIHYNVMRFKDTM
                     NSDEADA"
BASE COUNT         1132 a          478 c          493 g         1278 t
ORIGIN      
        1 gatctgtgta ttgatgcatt atccagtaca agaaatattt gcttgacaga aggggaatca
       61 tattttctgt ctatacgttt gatgaaatcc agaaactgat ctcccgtttt atttttgtag
      121 gaatgtgtat acatttggtc atttgtgtgg tcatagacac caaatacatt tagaattctt
      181 tttatcttct gtgctttttc tatcttggac tgtatggaac accatgatgg accgccatat
      241 gtctttgctg ttgttggtcc tttctcatct tgatacagta atatagaatc aggaggtgtg
      301 ttatatctta attcttcaat cctatttttt ttaattcata ttctggatct ctgttctttc
      361 cgagtaccgt ctttgaattt ctccactcta ttttactttc atttaggatc tctttaattc
      421 tggtatgact gatcccttgt tttactatct ttttgtctct ggtaagataa ccagcagcaa
      481 gtgatctcag tgaccatgtg gagaatttca atcccagatc ccttggattt gtagatgcta
      541 tttttataat ctgttttctt gcgtcatcat tatctatctt taccatagga gaatagtcta
      601 tctttgtaaa cagagcttct attccattat cattgaattt atgaatccac tttctaattg
      661 ttctgtcgta tatgttggtc atctctctta tttctggtac tgtgtaacct tcactagcaa
      721 gaagtacaat ttttatcctg tactttattt cttgatttgt atccaaaaga gaatataatc
      781 tatttttctc tttatctgta atatctctaa gggcagtata tcttaccacg tcacaattgt
      841 gtaaatatat accaatctaa agctgtatct atcagatatc tttgtcaaag tgatagatat
      901 tattttacta aaattgtcaa tctatgtatt tacataactg ttaaccagta ttttaaagat
      961 agaatcgaga gttttgatga ctattatcca tgtatgcaaa aagatgaatg taatttattt
     1021 catgtacata actggctaca attctttgta tctatgtata atgatacaac atttgagaat
     1081 tattttatta acgaattgaa tgaaagaggt gaatatatct taaattaaca gagccgcttt
     1141 atcagatatt tatctttaca attgtaaaac taaaaagata atccaagagc aatcaaatac
     1201 agcttaggaa gataacgatt gtttaattat atgctataag aatgatgatg tttgttaatt
     1261 gaattttgac tcagtctcga ttaactataa tattgtaaat ctggtattaa tattagataa
     1321 tttgtaaagc tgtatgatat ccctatcata tttatgcata acaaaagttg gcaaaattca
     1381 ttttaatttc tgatctatgg aattgtcatg tccttttaat ccttaattca tatatctaga
     1441 gtatgaatat tttataattt agatatatgt ataataatta aatttgttat tatctatcat
     1501 aaatgctaat atctcatagg cctatttaac ttgaccaatt caggctctgt ttgaatcatt
     1561 tcaaatcttg ttctgtagca ttgcatgatt aacttaattg cattcattct ttctttttca
     1621 tctgcttttg atgaatcgat aattgtccaa agtttcttta taacttcatc taatccttcc
     1681 aatgaatttt gatatacttc aaataatctt tcgccataat ttttcttatt cttgtatatt
     1741 tctttttgaa gatagtgtat atctctagaa attgttggtt gacttatatg taatgtattt
     1801 gcaatttcat attgagcata tcctcttgta agcatctctt taactttatt tctacgccat
     1861 tccctatgtt ttttagattt tcttaaattc gctctttttt cctcgatgtt atcagacaat
     1921 actattaaat tttataataa aagatactta tatttcttga taaaaagttt atcacttatt
     1981 cacattttat tcatctaata ttcattttgt gcttaattta tctatttttt tgtgctggca
     2041 atttatttat aaaatttatt tatcacattt tcccgcccag tccattcttg gatattgaaa
     2101 ggtttcgtta aggtttttat tcatgattaa gagcatttgc tagcaattat aagtaaaaga
     2161 agaaatcaag aaagaatgat ttggtagcaa aactgctagc aaatttttgc tagcaatgct
     2221 tatcataaaa aatttgtgtt agcaaataat aattttttgc taacattgca gaaactcttg
     2281 ctagcaaaat tggtatagca gtttgtaaaa caattttgtt tccaaatatt taataagtag
     2341 atagtattac taataagtat gtcattaaga caaatagcag aaaagcaaca accgattgaa
     2401 aataatgata aaaaggatta taaaagatat ggatggaaga acgttgcaat taagataaaa
     2461 gaaaatgatc taatactttt taacagacaa ttagataaac taggaattga gactcttggt
     2521 gatctcgtaa aagacctttt agccggcaag ataacacgat taacagaaga taaacaaata
     2581 gaaataatga agactaatag tcaaggatca ggtcaatata ctttacaacc agaaacaaat
     2641 tatgactttt acaaaaaaat cgatataggc gatttattaa aagaatatga aaaaagatat
     2701 catccaaaaa cagccaagtg tcttgtaagt tattttagaa gatatgcaga tatatttttc
     2761 ggcatcaatc ctgacgtacc attatttaga ctaaaaccac acaaaagatc ctggatacta
     2821 caagctatga aaagaattgg tgattattac ttttggaaat ataattctcg tgatattcag
     2881 gatttggtta aaagaataat cgaaagatac taccttaata aagatcttga tatgaaggat
     2941 aaaatttacc ttgttaatcc tggatatata ataaataaat tgacctctct tatggtcatt
     3001 cctgggcata ttggttttat tgttaaagtc ggtcttttta caggattaag agaagaggag
     3061 ctttattata tttacaataa agaaatatgt aataatgaac taggttgtaa atgcaataac
     3121 cttcatgtta ttaatttgga taacaagatg acaataattg gaattaattg gataagagca
     3181 aataaaaaag catttgttac tattttacca acagtagttt ggaaggattt tagaaattta
     3241 ccaaagtttg ataggtcaga tatcattgca gctcatagta taacaaaaag ggatgcagaa
     3301 atattatacg taggccttcg caaaattcat tataacgtaa tgcgttttaa agacacaatg
     3361 aattcagatg aggcagacgc t
//
LOCUS       DATIAS010000553         3070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1462504, whole genome shotgun sequence.
ACCESSION   DATIAS010000553 DATIAS010000000
VERSION     DATIAS010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462504"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VLA74_11035"
     CDS             complement(<1..181)
                     /locus_tag="VLA74_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSF51284.1"
                     /translation="MPKIFSDVSEKEISRSIAAMFMETMNEYTDSDVIIIGAGPAGLS
                     AGRELAKSGIRTLIIE"
     gene            complement(345..1535)
                     /locus_tag="VLA74_11040"
     CDS             complement(345..1535)
                     /locus_tag="VLA74_11040"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF51285.1"
                     /translation="MERFFGRKITNKFKLEEKQAKEDRQKKEEAKEEKKPSGSENKTK
                     ASNITDIQKFDLYSKGVNHMANEKLSDAIRCFELSLRMDPQFVNAWIKKGYSHFHLGE
                     YTVAISAYDHALDLDINNFEAWNLKGLAYYRMNNLIKAIECCEKAIDLNHNDGMSWYN
                     LACYLVLDGRVDDGMEALKRAIEIDISYAKRAVRDRDFENAKAEEGFRRIIEVVVLEA
                     VRHGYDYPGKIIWITGMDKVEVDDALLRLTMKGLVIRREKKNLFKKEEYFELSKEIAS
                     KVGTVKRSGLMGKSREISPPVQQLKDISELLGKSRESVEQGDVETTISYFDKLINPSI
                     HGSTMIEKFFNEHRDLRLYQNRLKDKGQEYLNSHKTDFLKLITEIDSKVRGTHFSSNN
                     IVDG"
     gene            1672..2121
                     /locus_tag="VLA74_11045"
     CDS             1672..2121
                     /locus_tag="VLA74_11045"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSF51286.1"
                     /translation="MDYYKILGIPKDSNQIQIRKAFRELALKYHPDKNKNSEESNLKF
                     MQIVQAYEVLSDVKARKRYDDNNLANEIFQQKRQQGFQWTPSADFANFYSYENLKQYD
                     EKNFRARSEGGGMWDISEKANTGLWKATLILLASLGLVSFFIMLKIY"
     gene            2230..2526
                     /locus_tag="VLA74_11050"
     CDS             2230..2526
                     /locus_tag="VLA74_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit F"
                     /protein_id="HSF51287.1"
                     /translation="MKVLALGNRIFISSFQMAGIEGIDVQSPKEALSKINQIISKNEA
                     GLVLLSDDIGKEIRIELAKIRSIKPIPLIFELPSPGSKKEKVDYRALLKQILGV"
     gene            2703..>3070
                     /locus_tag="VLA74_11055"
     CDS             2703..>3070
                     /locus_tag="VLA74_11055"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylpyrimidine/phosphomethylpyrimidine
                     kinase"
                     /protein_id="HSF51288.1"
                     /translation="MKINSALSIAGSDPSGGAGIQADIKTFSSLGVYGCSAITAITVQ
                     NTRKIIEVFPIPSKIVIKQIKLILEDIKIDSIKIGMVYDESIISKIYDILKNENIPII
                     IDPIFTSTSGQNLIRPEAMQV"
BASE COUNT         1096 a          462 c          422 g         1090 t
ORIGIN      
        1 gttcaataat taatgttcta atccctgatt tagctaattc tctgcctgca gataaaccag
       61 caggtccagc accaataata ataacatcag agtcggtata ttcattcatg gtttccataa
      121 acattgcagc aattgagcga ctaatttctt tctcgctgac atcagaaaaa attttcggca
      181 tatattatta tatcaccatc aattgattat atattactaa tgcattttat tatgaatttg
      241 attatgtgat tatctcaaaa ataatatgta ttctttgtag ccgagagaga atatttatca
      301 gaatagggat atgtgtggtt tattttttct tctttttctt cttcctatcc atctacaata
      361 ttatttgatg agaaatgagt tcccctaact ttactatcga tctccgttat taatttcaag
      421 aaatcagttt tatgagaatt cagatattct tgtcctttgt ctttaagtct attttgatac
      481 aatcttaaat ccctgtgttc gttaaagaat ttctcaatca tggtacttcc atgaatagaa
      541 ggatttatca atttatcaaa ataacttata gttgtttcaa catctccctg ttctacagat
      601 tctctacttt ttcctaatag ttcacttata tcttttaatt gttgaacagg aggagaaatc
      661 tctcgggatt ttcccatcaa cccagaacgt ttaactgttc caacttttga agctatttct
      721 ttagaaagtt caaaatattc ctctttcttg aataaattct tcttttctct tcttattacc
      781 aaacctttca tagttaatcg aagtaaagca tcatcaactt caactttatc cataccagtt
      841 atccaaatta ttttgccagg ataatcataa ccatgtctta ctgcttccaa tacaacaact
      901 tcaatgattc ttctaaatcc ttcttctgct ttggcatttt caaaatctct atctctaaca
      961 gcacgtttag cataagaaat atcaatttca atcgctcgtt tgagggcttc cattccatca
     1021 tcgactctac catcaagaac tagataacat gctagattat accaagacat cccatcattg
     1081 tgattgagat ctattgcttt ttcacaacat tctatggctt ttatcaaatt attcatccta
     1141 taatatgcaa gtcctttaag attccatgct tcaaaattat tgatatctaa atcaagggca
     1201 tgatcataag cagaaatagc aacggtatat tcaccaagat ggaaatgcga atatcccttt
     1261 tttatccatg cattaacaaa ttgaggatcc attcttaaag ataattcaaa acatctaatg
     1321 gcatccgaaa gtttttcgtt agccatatga ttaactcctt tactataaag atcaaatttt
     1381 tgaatatcag taatattact agctttagtt ttattctcag atccggaagg ttttttttcc
     1441 tctttagctt cttctttttt ttgtctatct tctttagctt gtttctcttc tagtttaaat
     1501 ttattggtta ttttccttcc aaagaatctt tccataatat ataagatcca ttacgaagat
     1561 aaatagatta tgatttaatt cttatagtga ccaatataaa agatctcttt ataaatacat
     1621 aaaaatcaag aaaaaattat tattttacct tgaagaataa agtattaatt gttggattat
     1681 tataagatat taggaatacc aaaagattct aatcaaatac aaataagaaa agcttttcgt
     1741 gagcttgccc taaaatatca tcctgacaaa aataaaaatt ctgaagaatc aaacctaaaa
     1801 tttatgcaaa ttgttcaagc ttatgaagtc ttatctgacg tgaaagcaag aaaaagatat
     1861 gatgataata accttgcaaa tgaaatattt caacaaaaaa gacaacaagg atttcaatgg
     1921 actccttctg cagattttgc taatttctat agttatgaaa atctgaaaca atatgatgag
     1981 aaaaacttta gagcaagaag tgaaggagga ggtatgtggg acattagtga aaaagctaat
     2041 acgggattat ggaaagcaac gcttatttta ttagcatctt tgggattggt atcttttttt
     2101 attatgttaa aaatttacta actatctaga catattatta ctagaatagc attatctttt
     2161 agaaagttaa aatgtacctt aaaataaaaa aaatatttaa taggatggaa attattcaca
     2221 ttagtaaaat tgaaagtttt agcattagga aatcgtatat ttatctcaag ttttcagatg
     2281 gctggtatag aaggaattga tgttcaaagt cctaaagaag ctctttcaaa aataaatcaa
     2341 attatttcta aaaatgaagc tggtttagtt ttattaagtg acgatattgg caaagagatt
     2401 cgaatagagc tggcaaagat acgatctata aaacctattc ctttgatttt tgaacttcct
     2461 tcaccaggaa gtaaaaaaga aaaagtagac tatagagcat tgttgaaaca aattttgggt
     2521 gtttaacaaa agaaatagat ataatataaa ttaaagcaaa aaataggaaa caaagcaggc
     2581 aagtgaaaaa aagatctttt tatagaatta atattaatgc atcatttgat taatttatta
     2641 ataattcatt aattaattat taataataga atctgtgtat attttttaca ttaaagaaaa
     2701 agatgaaaat taattctgcg ttaagtattg ctggaagtga tcctagtgga ggggcaggga
     2761 ttcaagcaga tatcaaaacc ttttcatcat taggagtgta tggatgttct gctattactg
     2821 caataactgt ccaaaatact aggaaaataa tagaggtttt tcctattcct tctaaaatag
     2881 taataaaaca gataaaatta attttagaag atataaagat tgattcaata aagattggaa
     2941 tggtttatga tgagtcaata attagcaaaa tatatgatat tttgaaaaat gagaatatcc
     3001 ctataattat agatccaatt tttacttcaa catctggaca aaatcttata aggcctgagg
     3061 caatgcaagt
//
LOCUS       DATIAS010000554         3549 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_781198, whole genome shotgun sequence.
ACCESSION   DATIAS010000554 DATIAS010000000
VERSION     DATIAS010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_781198"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VLA74_11060"
     CDS             complement(<1..184)
                     /locus_tag="VLA74_11060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51289.1"
                     /translation="MSDSKGEEIKIIMQRKKDGIDIPLSNNVQSRFSSTYLEYVKLVH
                     NALPEINYQDIDLSTSF"
     gene            complement(194..982)
                     /locus_tag="VLA74_11065"
     CDS             complement(194..982)
                     /locus_tag="VLA74_11065"
                     /EC_number="2.7.4.26"
                     /inference="COORDINATES: protein motif:HMM:NF040647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl phosphate kinase"
                     /protein_id="HSF51290.1"
                     /translation="MCSQVALIKLGGSIITNKDKPLTANHQAITDLAKSISRIKRPLI
                     LVHGGGSFGHYWSVKFDMHTKPEKYSSKGISIVHSSMLDLNKIINEIFEKEGLYPYSV
                     PPFSFLNNGKPSRLKIKELEKMTEHNIIPITYGDVVHMRENKYSILSGDVIMRLLSNI
                     LNPYKAIFTINVDGLYNNLIEKKIIQEIKPSSFNLKNKNIIMKQLGEINDVTGGMKRK
                     VEEAIKIAQHGNDVIFVNGLHPSNLEKVFKGKKIKGTIFKANKK"
     gene            complement(1017..1994)
                     /gene="mvk"
                     /locus_tag="VLA74_11070"
     CDS             complement(1017..1994)
                     /gene="mvk"
                     /locus_tag="VLA74_11070"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004496 - mevalonate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016126 - sterol biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HSF51291.1"
                     /translation="MNTSASAPGKIILFGEHFVVYDKPAILASLNRRIYVKVIRKHYE
                     INNEIVINNELFGNKSYPISIFRNLKKPKIISDEYYPILFITKKIFNENKYKESLEFT
                     FKSDIPYGMGLGSSAAAAVATVAALSKIFNRKVEDKKILKLAIEAEKLIHKNSSGADC
                     IISAHGGLIFFQKHTRFKKIYPKKELSFILINTGIKHSTGQLVNIVKKYQQQNLREFV
                     NLSKESEEITKRAARALEEGDKIMVGELMTENQRLLQKIGVSNKIIDRIINLCSAYGA
                     LGSKITGAGGGGCVLVLTEQENRENFISKIRIEGFECISVTLESRGLLY"
     gene            complement(2008..2856)
                     /gene="amrB"
                     /locus_tag="VLA74_11075"
     CDS             complement(2008..2856)
                     /gene="amrB"
                     /locus_tag="VLA74_11075"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HSF51292.1"
                     /translation="MRDLNRSPDFAGIFYPSKKDELLDLLNKCFYKSYFGPKEQSNKL
                     FKQKIYGFVVPHAAYEFSGSIAAQAYHEILDLNTDTFIIIAPDHNGIGSKISILTQGS
                     WQTPLGIIKINTDIASKIMKNSTKIEVNVSAHKIEHSIEIQIPFIQFCRKNQFRIVPI
                     LVRDQDVETAIELGRSIAESIYDENVIIIATSDFTHYESHEQAHNKDLELIKTIENLE
                     IDSFYSTIKDMNISLCGYGPIASAVKAVQIQGAKKGTLLKYATSGEIQSDYRNTVVGY
                     CALAFT"
     gene            complement(2853..>3549)
                     /gene="rpsB"
                     /locus_tag="VLA74_11080"
     CDS             complement(2853..>3549)
                     /gene="rpsB"
                     /locus_tag="VLA74_11080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HSF51293.1"
                     /translation="VEDTGSVEDTGSVEDTGSVEDTGSVEDTYPETENLEKMILSTGI
                     RVGTPVKTKSMSPYIIRSNPEGLYILDISKTLQRIDIAAKFIGRTAISKVAVTSAREY
                     GKKPVEKFCEATGATPILGRFMPGTFTNPSLPKYLEPEIVIVTDPQADHQAVIESTRA
                     GVPVIAVSNSDNVISNVDLVIPANNRGRKALATVYWLLAREVMKKQGKIKSDKEMKVS
                     IDDFETKLVEEMV"
BASE COUNT         1022 a          617 c          523 g         1387 t
ORIGIN      
        1 gaaaactggt agaaagatct atatcttgat aattaatttc aggtaatgca ttgtgaacta
       61 gttttacata ttctaaatag gtggaagaaa acctagattg aacattatta gaaagaggaa
      121 tatctattcc gtccttcttt cgttgcataa tgattttaat ctcttctccc ttactgtcag
      181 acatatctct caattacttc ttattggctt taaaaattgt acctttgatt ttttttcctt
      241 tgaatacttt ttcaaggtta gatggatgca atccgttgac aaaaataaca tcatttccat
      301 gttgagcaat ctttatagcc tcttcaactt ttcttttcat acctcctgtc acatcattga
      361 tttcacccaa ttgtttcatt attatatttt tattctttaa attgaagctc gatggtttta
      421 tttcttgtat tatttttttt tctattaggt tattgtacaa accatctaca ttgattgtaa
      481 agatagcttt gtacgggttt aaaatattac ttaataacct cataattacg tcaccagaaa
      541 gtatagaata tttattttca cgcatatgga cgacgtctcc gtatgttata ggaataatat
      601 tatgttcagt cattttttct aattctttta ttttaagtct cgatggcttt ccgttgttta
      661 ggaacgaaaa tggtggtacg ctataagggt aaagcccttc tttttcaaag atttcattaa
      721 ttatcttatt aagatctaac atcgaggaat gaactattga tatgcctttt gaactatatt
      781 tttctggttt tgtatgcatg tcaaatttaa ctgaccagta atgaccgaat gaacctcctc
      841 catgtactaa tattaaaggt cgtttgattc ttgatataga ttttgcaaga tctgtaattg
      901 cctgatgatt tgcagtcaga ggtttatctt tattagttat aattgatcca cctaatttta
      961 ttaaagcaac ttggctacac aattaaaaga tagaaaaaaa acacttgatt taaattttaa
     1021 tataataatc ctctactttc taaagttacg gatatacact caaatccttc tattcttatt
     1081 tttgatataa aattttctct gttctcttgt tctgttaaca ctaaaacaca tcctccgccg
     1141 ccagcgcctg ttatcttgga cccaagagca ccatatgctg aacataaatt aatgattcta
     1201 tcaattattt tattagatac acctattttt tgtaataatc tttgattttc agtcattagt
     1261 tcacctacca taattttatc accttcttct agtgctcttg ctgccctttt tgtaatttct
     1321 tctgattctt tggacaaatt aacaaactct cttaaatttt gttgttgata tttttttaca
     1381 atatttacaa gttgtccagt cgaatgcttg atcccagtat ttattagaat aaatgataat
     1441 tctttcttgg ggtatatctt tttgaatcta gtatgcttct gaaagaatat tagaccaccg
     1501 tgagcagaaa ttatacagtc tgctcctgat gaattcttgt gtattaattt ttcagcttct
     1561 attgctaatt ttaatatttt tttatcttcg actttcctat taaatatctt tgataatgct
     1621 gcaactgttg caactgctgc agcagcagag gaacccaacc ccataccata aggaatatca
     1681 gatttgaaag taaattctaa actttcttta tatttatttt cattaaaaat tttttttgtt
     1741 atgaatagaa ttggataata ttcatcgcta attatttttg gtttttttaa attacgaaaa
     1801 atagaaatag gatacgattt atttccaaat aattcgttat taattactat ctcattattt
     1861 atttcataat gttttctaat taccttcaca tagattcttc tattgagtga tgcaagaatc
     1921 gctggcttat cataaacaac aaaatgttcc ccaaacagaa ttatttttcc tggcgctgat
     1981 gctgaagtgt tcattgtgtg tctatgttca tgtgaatgct aatgcacaat atccaactac
     2041 agtatttcta taatctgatt gaatttcacc actagtagca tattttagta gggtcccttt
     2101 ttttgctcct tgtatttgca cagcttttac tgctgaagct ataggtccat atccacataa
     2161 ggaaatgttc atatctttga tcgtactata aaatgaatct atttctaaat tttctattgt
     2221 tttaattaat tccagatcct tattatgtgc ctgttcatgg gattcataat gagtaaaatc
     2281 agaggtggcg ataatgataa cattttcatc atatattgat tcagcgatcg atcttcctag
     2341 ttctatagca gtttctacat cttggtccct tactagaatt ggaactattc tgaattgatt
     2401 ttttctacaa aactggataa agggtatttg tatttcaatt gaatgttcta tcttatgagc
     2461 acttacattt acctcaattt ttgttgaatt tttcattatt ttggatgcaa tatcagtatt
     2521 tatttttata attccaagag gtgtttgcca tgatccttga gttaggatag atattttact
     2581 tcctattcca ttatggtcag gagcaattat tatgaatgtg tctgtattta ggtctaaaat
     2641 ttcatggtat gcttgagcag caatagatcc tgagaattca tatgctgcat gaggtaccac
     2701 aaatccgtaa atcttttgtt tgaataactt attagattgc tctttcggac caaaatagct
     2761 cttgtaaaaa catttgttaa gtagatctaa gagttcatct tttttagaag gatagaatat
     2821 tcctgcaaaa tcgggagacc tgtttagatc tctcaaacca tttcttctac taatttggtt
     2881 tcgaaatcat caatacttac tttcatttct ttatctgatt tgatctttcc ttgtttcttc
     2941 attacctctc tggcaagtaa ccaataaaca gtcgccagcg ctttcctacc tctattgttt
     3001 gcagggataa ctaaatctac gttcgaaata acattatcgc tatttgaaac agcgattact
     3061 ggaacacctg ctctcgtaga ttctataaca gcttgatgat cagcctgtgg atccgtcaca
     3121 atcacaattt ctggttccag atattttggt aatgatggat ttgtaaatgt tccaggcata
     3181 aaacgaccta ggataggagt agcacccgtt gcttcacaga atttttcaac tggtttcttg
     3241 ccatattctc tagctgaggt tacggctacc ttggatatgg cagttctgcc tatgaatttc
     3301 gccgcgatat ctattcgttg tagtgtttta ctgatatcca aaatgtatag gccttccgga
     3361 ttagatctaa tgatataggg tgacatggat tttgttttta ctggagtacc gactcttatt
     3421 ccggttgaca aaatcatctt ttctaaattt tctgtttctg gatatgtatc ctcgacagaa
     3481 cctgtatcct cgacagaacc tgtatcctcg acagaacctg tatcctcgac agaacctgta
     3541 tcctcgaca
//
LOCUS       DATIAS010000555         3128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1054214, whole genome shotgun sequence.
ACCESSION   DATIAS010000555 DATIAS010000000
VERSION     DATIAS010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1054214"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(285..1361)
                     /locus_tag="VLA74_11085"
     CDS             complement(285..1361)
                     /locus_tag="VLA74_11085"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF51294.1"
                     /translation="MNKVIVIPKGFRKTKMHEVHNIKYFTPRIVSIKDGQSISWINKD
                     SESHHLISGDIENGKPDGIFNSEIIRPQKCYSKKFDASSGLIRYYCVIHPAEQGFIVI
                     NKTISGTNNDINSSEIKYLNKIFSNVRNQSIESMLIRYVDPIILEIFNYPNLEIFRNK
                     VLSIVFWDLGGFSKLCELLENEPYLIVGFLREFFNEADRIIHKNNGILDKFMGDGLMA
                     IFGFKDNNIYDNKESVLDALKSAIELSASFEKIKDGWIEIWKNQFGLDISNIYLNCGI
                     NTGEALVGNINTEIRDQFTVIGSVVNLAKRLEEVAQKNQIVVSEETKNKVENKFNLKK
                     IYVNSDHKIRGFEHIKEYYELLKK"
     gene            2010..2759
                     /locus_tag="VLA74_11090"
     CDS             2010..2759
                     /locus_tag="VLA74_11090"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSF51295.1"
                     /translation="MLLLFAIPIIDKEVTAQEIIDNEALSENNDDNSAINKFVAKPQV
                     NVNIQGTELNDKLRGGDGDDQIDGGKGEDTLQGNQGDDEIDGGKGDDKLNGGDEDDEI
                     DGGADDDQIDGGKGDDKLNGGDGNDTLRGNEGDDEIDGGKTDDLIDGGDGDDELKGGK
                     GADRFVCDMGDKIIDYNSLENDKIVGQCEYEDKGLIPKTIPIPDKYPAKQTVEKEDLF
                     PNSAMTPSNEDDSFETFVSKFIGMHFPGLFK"
BASE COUNT         1114 a          425 c          493 g         1096 t
ORIGIN      
        1 agatccagtc gagaaaacga ttagaccccg tatcctcttc agaatgcaga tttctcggta
       61 aaaacagtta aagcccaata aagcaagaag aagctaaatt gttagagatt ataaaatatt
      121 tgtctacaaa agtcttgctt aattttatat gctagcatct ggatcataaa atatattcaa
      181 tagttataat agtatataat taattggata tttatttatt aatttaaaat ccaattcttt
      241 tctcatatag aaatttggga aagagagaat actgtgaaat atacttattt tttcaataat
      301 tcgtaatatt ctttgatatg ttcaaaacct cttatcttat gatctgaatt tacatatatc
      361 ttttttagat taaatttatt ttccactttg tttttagttt cttctgaaac aacgatttgg
      421 tttttttggg cgacttcttc taatctcttt gcgaggttga caacagaacc aattacagta
      481 aactgatcac gaatttctgt attaatgtta cccactaatg cctctccagt atttatacca
      541 caatttagat agatattaga tatatcaagg ccaaattgat ttttccatat ttcaatccat
      601 ccatctttaa ttttttcaaa gctggcagac agttctattg ctgatttcaa tgcatctagt
      661 acgctttctt tattgtcgta aatgttgtta tctttgaacc cgaaaattgc cattaaacca
      721 tcacccataa atttgtctaa aataccattg tttttatgaa taattctatc tgcttcatta
      781 aaaaactcac gtaaaaatcc tactattaaa taaggttcat tctctaataa ttcacaaagt
      841 ttggaaaatc cacctaaatc ccaaaaaacg atagataaaa ctttgtttct gaatatttct
      901 aggtttggat agttaaatat ttctaaaatt atgggatcta catatcggat tagcatagat
      961 tctattgatt gattccttac attagagaat atcttgttta aatacttaat ttcgctacta
     1021 ttgatatcgt tatttgtacc agagattgtc ttgttaatta caataaaacc ttgttctgca
     1081 ggatgtatta cacaatagta acgtattaat ccacttgacg catcaaattt ctttgagtaa
     1141 catttctgag gtcgaattat ttcactatta aaaataccat caggtttacc attttcgata
     1201 tctcctgaaa ttaaatgatg agactctgaa tccttgttga tccatgatat tgattgtcca
     1261 tcttttattg atacaatcct tggtgtaaaa tattttatgt tatgaacttc atgcattttt
     1321 gtttttctga aacccttggg aataactatt actttgttca tctggctaac aaaccttgat
     1381 ctatctgcat ttagagagta actaaactta ttagagttta tctatcccac gttaagaata
     1441 atagattaat atttgtatcg ttgcatcatc tgaaacattg ggaaatttgt aataaaattt
     1501 gtgaatgttg ttaaatattt gctaaagatc agcctatcct aaagagattg atttgacaat
     1561 attttacatt aaagttgtca gtgtttttga catatatctc agacgaatac cacaaaaaaa
     1621 atatacagac aaggggtaca tagcaatata ttatgaatct tcttgttttt tttcatataa
     1681 tctaatggtc gttatattcg aaataaaata ttcatatatt catctatttt tgttctgttc
     1741 atatttgcac ttattctaaa taataaaaac aaagatattt atgcggatag aaatttgttc
     1801 agccaaatcc tatagcgata ataatgattt ggcttgaacc atttattagt tgaataagaa
     1861 attctcatag ttaaatttta tagataaata taatataact tcataaggat atttcaacaa
     1921 taaaagagta acaaaaacaa tttaaataat attactatga taaagatatt gctaaaaatc
     1981 atagtaataa tattgaattt ggtataattt tgctactctt atttgctatt cctataattg
     2041 ataaagaagt gactgctcaa gagattatcg acaatgaggc attatctgaa aataatgatg
     2101 ataattcagc tataaacaaa tttgtagcaa agcctcaagt taatgtaaat atacagggta
     2161 ctgaactaaa tgacaaattg aggggaggag atggtgatga ccaaattgat ggaggaaagg
     2221 gagaggatac tctccaaggt aatcaaggag atgatgaaat tgacggagga aagggagatg
     2281 ataagctgaa tggaggagat gaagatgatg aaattgacgg aggagctgat gatgaccaaa
     2341 ttgatggagg aaagggagat gataagctga atggaggaga tggaaatgat actctccggg
     2401 gtaatgaagg agatgatgaa attgacggag gaaagacaga tgatctcata gatggaggag
     2461 atggcgacga tgagctgaag ggaggaaaag gagcagatag atttgtgtgt gatatggggg
     2521 acaaaattat tgactataat tctttagaaa atgacaaaat tgtaggacaa tgcgaatatg
     2581 aagataaagg attaatacca aaaactatac ccatccctga taagtatcca gctaaacaga
     2641 ctgtcgaaaa agaagatcta tttccaaatt cagcaatgac gcccagcaac gaggacgata
     2701 gctttgaaac atttgtgtct aaattcattg gtatgcattt tccaggatta ttcaaataat
     2761 attattatga tttctcacat atttttttaa gtatagaagt gtgtcaaagc tcttaaatgt
     2821 tcaagattaa aaaaagaagc agttagtggt taaagtttaa tttataccat tgaagcattt
     2881 aatatctagt agaaaatatc tattggtctg tattttctgt tcaaatttac ttaccattag
     2941 actcttaatg tatataatag taatacgatg tactttttta tcatgttctg tactcaaatt
     3001 tagtgtattt tttctattta cgttccgtaa tttgctttac ttgacatagc atcaaaaact
     3061 aacaaaagaa aaagaattta atcgattata agattcaagt attaaatttt acttttgaat
     3121 tataaata
//
LOCUS       DATIAS010000556         2060 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1463091, whole genome shotgun sequence.
ACCESSION   DATIAS010000556 DATIAS010000000
VERSION     DATIAS010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463091"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..158)
                     /gene="rpl11p"
                     /locus_tag="VLA74_11095"
     CDS             complement(<1..158)
                     /gene="rpl11p"
                     /locus_tag="VLA74_11095"
                     /inference="COORDINATES: protein motif:HMM:NF015879.4"
                     /note="binds directly to 23S ribosomal RNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HSF51296.1"
                     /translation="MGDKKTVSALVTGGEASAGPPLGPALGPLGINVLQVVNTINDKT
                     KDFSGMKVP"
     gene            complement(250..900)
                     /locus_tag="VLA74_11100"
     CDS             complement(250..900)
                     /locus_tag="VLA74_11100"
                     /inference="COORDINATES: protein motif:HMM:TIGR00405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor Spt5"
                     /protein_id="HSF51297.1"
                     /translation="MKNKKDIDDDINDIEFNDDNYKDSNELASDNTNTFFKNEKTKNI
                     EKVNSSINNKSDQLIKNDSNAADTQDIDSKFFAIRITGGQENVVANILQNRINSKRIS
                     LRSILILENFKGYVIVEAPDSNIAYDALYGVRHVRGQIRGDLPFSDIEKYLVKKPVVT
                     ELSIDDTVEVVAGPFKSMKAKIIRVDYEKQEATVVLLDSPYQIPVTVDANYLKKIK"
     gene            1231..>2060
                     /locus_tag="VLA74_11105"
     CDS             1231..>2060
                     /locus_tag="VLA74_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSF51298.1"
                     /translation="MNEIQWHFPLTERPFLEIAIHHNISENEVMKRINNLRQMGLIRQ
                     INAIFDTRRLGYKSALIAFAVKPEKLDYVANEINKYSGVSHNYERNHEFNIWFTLAVP
                     PEKDMKEILDKMSSLEGVIKYRLLPTLKMYKIGVKLDMVNDDSSNPKPTEKIKELNPE
                     KSKLTNQDKEFIRELQKDIEIIPEPFKKSAEKLGITLNELFEKAKEFEENGIMRRFAA
                     ILRHRDAGFTANGMIVWRVPEGMVDKVGYKLAEFPQVSHCYRRPTYPDWKFNIFSMIH
                     A"
BASE COUNT          770 a          281 c          307 g          702 t
ORIGIN      
        1 ggaactttca ttcccgaaaa atctttggtt ttatcattaa tagtatttac aacttgcaag
       61 acgttaattc caagtggtcc caatgctggt ccaagaggtg gtcctgcact agcttctcct
      121 ccagtaacta aagcggagac agttttttta tcgcccatat caaaaacaat atttttccga
      181 aatataaatc gacatcatat atttttaaaa tttttttatt tattcaattt tctatttaaa
      241 taaaactatc tatttaattt tttttaagta atttgcatca acagtaacag gaatttgata
      301 tggagaatca agtaatacta cagtagcttc ctgtttttca taatcaacac gtataatctt
      361 tgctttcatt gatttaaatg gtccggctac aacttctacg gtatcatcta tacttaactc
      421 tgttactaca ggtttcttta caagatactt ttcaatatca ctaaaaggaa gatctcctcg
      481 tatttgtcca cggacatgtc ttactccata caatgcatca tatgcaatat ttgagtcagg
      541 agcttcaaca ataacataac ccttaaaatt ctccaagata agaatagaac gtaaacttat
      601 tctttttgaa tttatcctat tttgtaagat atttgcaaca acattttctt ggccacctgt
      661 gattctaatt gcaaaaaatt tggaatcaat gtcttgagta tcagcagcat tcgagtcatt
      721 tttaattaat tgatctgatt tattatttat agaagaatta actttttcta tatttttagt
      781 tttttcattc ttaaaaaagg tatttgtatt atcagaagct aattcattgg aatctttata
      841 attatcatca ttaaactcaa tatcatttat atcatcatct atatcttttt tgtttttcat
      901 taattttaat acaatatttt acgattaaaa gtattttata aatttacttt aattattagt
      961 aaatgaaaaa gaataagaat ccatgattga cgataatttg ctattaaagg attaattata
     1021 taaattcttt ataacttgaa atacagaata gtttagaaat ctttaaattt tttataattc
     1081 atactatcaa aagtctagat aatatggata ttctatttga tatgaaagat aaaacaaaat
     1141 cataagtatt taatagataa aatacataat caacaaaaat tgagaacatc tatacaagta
     1201 aatcaattgg atttactaga tagaaatatt ttgaatgaga ttcaatggca ttttcctctt
     1261 acggaaagac cgtttttaga gatagctatt catcataata tatcagaaaa tgaagttatg
     1321 aaaaggataa ataatctcag acaaatgggc ttaataagac aaattaatgc aatatttgat
     1381 actagaagat taggatacaa gagtgcactg atagcttttg cggtcaaacc tgaaaaatta
     1441 gattatgtag ctaatgaaat aaacaagtat tctggtgtaa gtcacaatta tgaaaggaat
     1501 catgagttca atatatggtt cactttagca gtaccgccgg aaaaggatat gaaagaaatt
     1561 ttggataaaa tgtctagcct tgagggagta ataaaatata ggcttttgcc aacattaaaa
     1621 atgtacaaaa taggtgttaa attggatatg gtcaatgatg attcctccaa tcctaaacct
     1681 acagagaaga ttaaagaact taatccggaa aaaagtaagc taaccaatca agataaagag
     1741 tttataagag aattacaaaa agacatagaa ataattcctg agccttttaa gaaaagcgca
     1801 gaaaaacttg ggataacact gaatgaatta tttgaaaaag caaaggaatt tgaagaaaat
     1861 ggcataatga gacgttttgc ggctatcttg agacatagag atgcgggatt tactgcaaat
     1921 gggatgatag tatggagagt gccagaagga atggtagata aagtaggata taaattggct
     1981 gaatttccac aagtaagcca ttgttataga agaccaactt atccggactg gaaatttaat
     2041 atatttagta tgattcatgc
//
LOCUS       DATIAS010000557         2005 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_100633, whole genome shotgun sequence.
ACCESSION   DATIAS010000557 DATIAS010000000
VERSION     DATIAS010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100633"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1207)
                     /locus_tag="VLA74_11110"
     CDS             complement(<1..1207)
                     /locus_tag="VLA74_11110"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSF51299.1"
                     /translation="MRDLYHRKKRLEYWINRINNDLNESDRIDVLKLVEHMQDRERSI
                     LWIIRCITALITIRKQLGKSFREVTKDDIRSFLKWMDERKYKASTNEKFRQVLKLFYK
                     TVYGNDDDGSFPDCVKWFSVKLGKEKTGKETSMDMSEYLEEDEIQKLIQCAPTLQKKA
                     FLACLYETGARPEEFLRITNRDIRIDKNGVVLMLRGKTGERRVRIVTFSKLLQQWLDV
                     HPLKDDNNYPLWVSEATNFKNNALGIRGAEKIIEDVLPKTGISHKHARLYILRHSRAT
                     HLARHFTEAQMCTYFGWVQGTQVVRRYIHLSGKDLDDKLLALNEGIENIKTEEYKLKP
                     IKCQRCSENISIGSSFCMKCGLSVKISEQYIAQTEIERENKELKLRLRSVVDEVTIMK
                     EQIKDLINVV"
     gene            1467..1664
                     /locus_tag="VLA74_11115"
     CDS             1467..1664
                     /locus_tag="VLA74_11115"
                     /inference="COORDINATES: protein motif:HMM:NF018096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HSF51300.1"
                     /translation="MADIIFSCRETGLDCDYIIKGETREEILKIGAEHVINAHGMKAE
                     DIFFKDIPCNFLCHTFGKINE"
BASE COUNT          602 a          348 c          275 g          780 t
ORIGIN      
        1 tgactacatt tatcaaatcc tttatctgtt ctttcattat tgttacttca tcaactacag
       61 atcttaatct cagtttcaat tctttgtttt ctctttcaat ctctgtttgt gctatatatt
      121 gttcagaaat ttttactgat agaccacatt tcatacaaaa actcgaacca atactaatat
      181 tctcggaaca tctctgacat tttattggtt ttaatttgta ttcttctgtt tttatgtttt
      241 caattccttc atttagagca agtagtttat catccaggtc cttaccagag agatgaatat
      301 atcttctaac aacttgagta ccttgaaccc acccaaagta tgtacacatt tgtgcttccg
      361 taaaatgtct tgctaaatgg gttgctcttg aatgccgtag aatatacaat cgagcatgct
      421 tgtgggatat tccagttttt ggaagaacat cttctataat tttctctgct cctcttattc
      481 ctaaagcgtt atttttaaag tttgtagcct cactaaccca aagaggataa ttattatcat
      541 ctttcaaagg atgtacatca agccattgtt gtagtaattt ggaaaatgta actattctga
      601 ctcttctttc tcctgtttta ccacggagca tcaaaactac tccattctta tcaattcgaa
      661 tatccctatt ggtaattctc aaaaattctt caggtcttgc accagtctcg tacaagcagg
      721 caagaaatgc tttcttttgt aatgttggtg cacattgaat taacttttga atttcatctt
      781 cttcaagata ttcagacata tccatgcttg tctctttacc agttttttcc ttgcctagtt
      841 ttactgagaa ccactttaca caatctggaa aacttccgtc atcatcattt ccataaactg
      901 ttttataaaa taatttcaaa acttgacgga acttctcatt agtagatgct ttatactttc
      961 tttcatccat ccactttagg aaagatcgta tatcatcttt tgttacttct cgaaatgatt
     1021 ttcctaattg ttttcttatt gttattaggg cagttataca tcgtattatc cataaaatag
     1081 atctttctct atcttgcata tgttctacta attttagaac atcaattcta tcagactcgt
     1141 ttaaatcatt atttattcta tttatccaat attcgagtcg tttctttctg tggtatagat
     1201 ctctcatctc gtattctgaa taattttgct tatgttgttt acaaagaata aggctttcgg
     1261 ttattgtagg acagcgaacc gagggttcaa tggggccagt gggatttgaa cccttcgata
     1321 aagtgggacc agttaaatag aattaggact tatttcatag ttttagaata ttttttattt
     1381 tatcttttaa atttcaatag atgctttaaa atcttcggtt gtaaaaatca gattaactta
     1441 ttatcttcta tactataaat atatcaatgg cagacataat attttcatgt cgtgaaacag
     1501 gattagattg tgattatata attaaaggtg agacaagaga ggaaatttta aagataggtg
     1561 ctgaacatgt aataaatgct catggtatga aagccgaaga tatttttttc aaagatattc
     1621 catgtaattt cttatgtcat acattcggta agataaacga ataaatgatc aacattaaca
     1681 tcaattctaa atatgactgt atatacctgc atgataagaa tatttagtat attttattgg
     1741 gcatgatcca attacacatt tacctaatca cgacaaatta atggaaaacg gtgtttatat
     1801 tcaagattat tttttgtctt acagtaagca ataaagactc attattccta atttcaacct
     1861 tctactggcc aaaaattttc tgtgattaat tcaactatat tacctgatgg atcatgaaaa
     1921 tagattgact tactgtttct catttctaat tctttgtcga tactaatttt cttcatctgt
     1981 aagaggttct tccaattctc atagt
//
LOCUS       DATIAS010000558         7476 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1054835, whole genome shotgun sequence.
ACCESSION   DATIAS010000558 DATIAS010000000
VERSION     DATIAS010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7476
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1054835"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(613..1965)
                     /locus_tag="VLA74_11120"
     CDS             complement(613..1965)
                     /locus_tag="VLA74_11120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51301.1"
                     /translation="MFLFLISAITIITILTSSTTSLFSWFQELNKFSINQQQQVFLQN
                     AFAQQIEQSTISKLQELENTDQVELKTQSPLLIPLIDISNVKTTTTSNNNNINVNSTI
                     SELLSDTNFTEMEGPDSKLRLAMSKLAINIPMQKAYENGHEIFLVTFDASDNILAQQL
                     TDYNREFPIHYTEVLRQTPESALNEAYIFKNGVKGKGHFGFQPTIITTKPGDKNYSPL
                     KHINFVEWNNSSGVTTTELKSKEEIVAAQQAGKLRINNTSPDLVINAPAIKWKGDSLK
                     IRADKIITDETPFLGGQVTNIDTDNMIVTMVTMRAFGPDGKTVYWLVTDATPMTDDII
                     KGGIVYSPANELLASTPVAVDFYQFINGIRDGGPQGFQPPISPVNLEDSNYSPMWRIL
                     FVVWKDPQKTHLLQTMYDLNQMMKKGLIEIIPVLKGKHIVNCPFFDQSTVLKFRHIYN
                     "
     gene            2532..3839
                     /locus_tag="VLA74_11125"
     CDS             2532..3839
                     /locus_tag="VLA74_11125"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSF51302.1"
                     /translation="MNSVKDIMSSVRVDEDKLHTKREGYQNNTLSSSRTSKIIENVLI
                     LQGGGSLGAFGCGVFKALSQKHVKIDIVAGTSIGGVNASIIAGSKNEKNPEQYLEEFW
                     LELADSFVDLNNFSTSLFPFFEQMISNYYFSFCTSQQKKNETIRKIEEYRIESLRSFL
                     SSAIFGNAKMFKPRWLLEYALKDPGYFQPAKWTYLYDHAPLATTLKKYIDYEKLKPTG
                     NPNSRLIITAVNVLTSEPLTFDSYRQQITPTHILATSGYPAYNLPWVEVEKGVYAWDG
                     GLLSNTPLREAINASPVNDKRIFLVENYPKKINALPENLLEVYHRTRDIIFCDKTLNT
                     VTMAKVITRYLHYIDELYKMIDDCVDMTKVEKAQLEKIRRKYKRYKQDTGAEIKNVYY
                     ISRDEPVHSIYENADFSPKVIKDSIREGELKTNQILDEIAKNK"
     gene            complement(3957..4091)
                     /locus_tag="VLA74_11130"
     CDS             complement(3957..4091)
                     /locus_tag="VLA74_11130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51303.1"
                     /translation="MIDEIVWKGWKVLTETIMTIPKFRSIWIKTKESHPDKDFRVIHY
                     "
     gene            complement(4236..4694)
                     /locus_tag="VLA74_11135"
     CDS             complement(4236..4694)
                     /locus_tag="VLA74_11135"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSF51304.1"
                     /translation="MSNNTILVKPSSLEEEHKETHEKLEKIVSSSGDTANMAKQVQSI
                     LQPHFEKEEQLSIPVLGALQPYVNGTLTEETRNQAIQISQQFKQEYPTMLEEHKQIVA
                     ALDNLENTAMQENRQDAISFIADLKSHAINEEQVTYPATIIIGELLELKK"
     gene            4687..4836
                     /locus_tag="VLA74_11140"
     CDS             4687..4836
                     /locus_tag="VLA74_11140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51305.1"
                     /translation="MDNAVLPPKSVVLFVTAKTSLIPAKAVVLLNIVFIDRAESIANS
                     KSFFC"
     gene            complement(5282..6427)
                     /locus_tag="VLA74_11145"
     CDS             complement(5282..6427)
                     /locus_tag="VLA74_11145"
                     /inference="COORDINATES: protein motif:HMM:NF019642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSF51306.1"
                     /translation="MSEDEDDFVKVGDTNDIQPSQMKEVQVDGESICIVNVEGKYYAI
                     GNICTHEGGPLADGNLEGYEVECPWHASKFDVRTGEAKEPPASEPEPVYQIKVDGNNI
                     LIKKQDSKKSKSPPNQLELTLIEKDKVEGTDVMSFKFNKNIGNHDENKTLLDYNAGQF
                     AFFDIGEVYNDPKGPIRHFTISSSPTENFIMFSTRIRDSPYKKRLSTLEKGTKVKVRG
                     PEGKFVLHQDYTNPVVFLSGGIGVTPFRSMIKYATDMKLPVKIIMFDSNRNRNNILFK
                     KEFDQWASLNRNLKIIYTISDNKDQNDKQSSLSSSSSRTATDDWKGEYGRINKAMILK
                     YVDTNILNNSIFYICGPPSMLKAMQILLQEDLEIPKERIKIEEFTGY"
     gene            complement(6594..6953)
                     /locus_tag="VLA74_11150"
     CDS             complement(6594..6953)
                     /locus_tag="VLA74_11150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HSF51307.1"
                     /translation="MIKTRRIYDKPDADDGFRILVDRIWPRGVKKNDVKIDLWQKDIA
                     PSNAIRKWFNHDQRKWDEFKRRYYEELKDRKEIVKLFLEKAEQGTITLLYSSKEEKYN
                     NAIALKEYLQSNKLQLK"
BASE COUNT         2470 a         1119 c         1111 g         2776 t
ORIGIN      
        1 tttagtcgct caatcatatc tgctattggc tcgtcaaaat ttattctttt tctaatatta
       61 ttattactag atttgttttc tatcatatta attgttttat ctatatattt ataatatatt
      121 ggggtttcat aaatacaaaa caaaccattt agatataaca ttattctttt atttgtaaat
      181 tgatgattgt ggtactcaga ggactttaat gtattgagat tgaatactca ctctttattt
      241 cactattgaa aaatactaaa tgaataataa atcagtattt caaatataga agcaaacaaa
      301 aattcaaaac gaggcaagat aatattattc tgtggaaact tgtagatcca acaactctga
      361 atttaatttg aacaaggatt ggtgttgaaa tatgaatgag ttagtatggt gagatgcatt
      421 tactaactgc ggaaaagcaa aatgcaaata tggctattta gatagttgaa gaaagcagga
      481 aaattcaaga aaattttcaa caatagagcc tagttcattt aaactataaa gaattgtttt
      541 atttacaaaa atacagtatt ttaatttcta tttttggttg atgagatata ttatatcata
      601 tacatttatt acttaattgt aaatatgacg gaactttaat actgttgatt ggtcaaagaa
      661 tggacaatta actatatgct tacctttcaa tactgggata atttctatta atcctttctt
      721 catcatttgg tttaaatcat acattgtctg taaaagatgt gttttttgtg gatccttcca
      781 aacgacaaat aatattctcc acattggact ataattagag tcttctagat ttactggtga
      841 tataggaggt tggaatccct gaggtccacc atctctaatt ccattgataa attgatagaa
      901 atcaactgct accggcgtag aagccagtaa ctcatttgca ggagaataaa caatacctcc
      961 ctttataata tcatcagtca ttggagtagc atctgttacc aaccaatata ccgttttacc
     1021 atccggacca aatgctctca tagtaaccat agtaactatc atattatcag tgtcaatatt
     1081 agttacttgt cctccaagga aaggcgtttc atcggttatt atcttgtctg ctctgatttt
     1141 aagtgaatca cctttccatt taattgctgg ggcgtttata accagatcag gagaagtatt
     1201 attgatcctt aattttcctg cttgttgagc tgctactatt tcctctttag attttaattc
     1261 tgttgttgtt actcctgagg aattattcca ttctacaaag ttgatatgtt ttagtggact
     1321 ataattttta tctcctggtt ttgtagttat gatagtaggt tgaaaaccaa aatgtccttt
     1381 accttttact ccatttttaa agatatatgc ttcattcaat gcagattctg gagtttgtct
     1441 taagacttca gtataatgaa taggaaattc tctgttatag tctgtcaatt gttgagctaa
     1501 tatattatca gatgcatcaa aggttacgag aaatatttca tgcccatttt cataagcttt
     1561 ttgcattggt atattaattg caagttttga catggctaat ctcaatttag aatctggtcc
     1621 ttccatctct gtaaaattgg tgtcagataa aagttcagat atcgtagaat ttacattaat
     1681 attattatta ttacttgttg ttgttgtttt tacatttgag atatctatta atggaattaa
     1741 taatggtgat tgtgttttca attctacttg atctgtattc tctaattctt gtaatttcga
     1801 tattgtcgat tgttctattt gttgagcaaa agcattttgt agaaaaactt gctgctgctg
     1861 gtttatagaa aatttattta attcttgaaa ccaagaaaat aaagatgttg tactactagt
     1921 taatattgta ataattgtta ttgctgatat taagaataaa aacaaaaaat atacaaatag
     1981 tgatgtatag ctattatact caacctgatt gtttttcata tttataaaga aaatataaat
     2041 ataatattat ataattattt taggaaatat cataaatccg atatattaaa attggtcgaa
     2101 agacgatatt taattattat gcatctacat gtattttaat tattatcctg atttctctat
     2161 tcgtcatatt atattatatt atattatatt tgcaggccac tcataggttg attaactgta
     2221 tttgtaggat ttttaaatgg agtcataatt gtaaatgttg acagtaaaat tttcattatt
     2281 ttttttctat tttttatatt tttattgtaa taagtttctt ttgtttttca acaaataaag
     2341 atttcaagtc tgaaagaaga ttctgactcc agccattgta aactactgga atagcaagaa
     2401 cagcttgtcc accagttacc tttaatctct ttatattgtc atctatccgt gtttctggac
     2461 gaacctaata gtagagcaat ccacaattat aatgtagaat tatggatata agagaatatg
     2521 ggagaaaaac tatgaactca gtaaaagata taatgtcttc cgtcagagta gatgaagata
     2581 aacttcatac taaaagggag ggttaccaga ataatacatt atcttcttca cgtacaagca
     2641 agataataga aaatgtgtta atacttcaag gtggcggatc tttgggggct tttggctgtg
     2701 gtgtattcaa ggccctttca caaaaacatg tgaaaatcga tatagttgca ggtacgtcaa
     2761 ttggcggagt taatgcttct attatagcag gaagcaaaaa tgagaaaaat ccagaacaat
     2821 atttagaaga attctggcta gagttagcag acagttttgt agacttgaat aatttttcta
     2881 cctctttatt tccgtttttt gaacaaatga tatctaatta ttatttttct ttctgcacct
     2941 cacaacaaaa gaaaaatgaa acaataagaa agatagaaga atatagaatt gaatcattaa
     3001 gatccttttt gagctcggca atatttggaa atgctaagat gtttaaaccc cgttggctat
     3061 tagaatacgc attaaaagac cccggctatt ttcaaccagc aaaatggact tatctttatg
     3121 atcacgcacc tttggcaaca actttaaaaa aatatattga ctatgagaaa ttgaaaccta
     3181 ctggaaatcc aaattcacga ttgataataa ctgctgtaaa tgtattaaca tctgaacctt
     3241 tgacatttga tagttatagg caacagataa ctccaacaca tatacttgca acctcaggat
     3301 atccagctta taatctccca tgggttgaag tagaaaaagg tgtatatgca tgggatggcg
     3361 gtttacttag taatacacca ttgagagagg cgataaatgc atctcctgta aacgataagc
     3421 gaattttttt ggtagaaaat tatccaaaaa agattaatgc cttaccagag aatttgcttg
     3481 aagtatatca tagaacaaga gacataatct tttgtgacaa aactctgaat actgttacaa
     3541 tggctaaagt gataacacga tatcttcact acatagatga actatataag atgattgatg
     3601 attgtgttga catgacaaag gttgagaagg cacaactaga aaaaattcgt agaaagtaca
     3661 agagatataa acaggataca ggtgctgaaa taaagaatgt atactatata tcacgtgatg
     3721 aacctgttca ttctatatat gagaacgcag acttttcacc aaaagttata aaagattcaa
     3781 ttagagaagg agagttaaag acaaatcaaa tacttgatga aattgcaaaa aataaataag
     3841 taaaggattt agggacactt atgtacgttg gaataatgta ctatagatca taatcatcat
     3901 caaattaact ttattaatct aaatctatta ttttattgat ttcatctatt tttgaactaa
     3961 taatgaatca ctctaaagtc tttatctgga tgtgattcct ttgtcttgat ccaaatgctt
     4021 ctaaacttcg gtattgtcat tattgtttcc gtaagaacct tccagccttt ccatactatc
     4081 tcatctatca tttgcatctc gttgaggcgg aaacatattc aatcaaatca agaaatgatg
     4141 ctatagtata taaaaaatgt ataacgatgc agaattgttt agactttcag ataaagagac
     4201 tacgcaatat attgaagata gaacttacag attttttatt tctttaactc cagtaattct
     4261 cctataatta ttgtggcagg ataggttacc tgttcttcgt ttattgcatg gctcttaaga
     4321 tctgcaataa atgaaattgc atcttgccta ttttcttgca tagcggtatt ttctaagttg
     4381 tctagtgcag caactatttg tttatgctcc tcaagcatag taggatattc ttgcttgaac
     4441 tgttgagata tttgtattgc ttgatttctg gtctcttcag ttagtgttcc attaacatag
     4501 ggttgtaatg ctccaagtac tggaattgat aattgttctt ctttttcaaa atgcggctgc
     4561 aatatagatt gtacttgctt tgccatattt gctgtatctc ctgaagatga gactattttc
     4621 tctaattttt catgtgtttc tttatgttct tcttctaatg atgatggttt tactagtatt
     4681 gtattattgg acaatgcagt attaccacca aaatcagtag tattatttgt tactgcaaaa
     4741 acttcattaa tacctgcaaa ggcagtagta ttacttaata ttgtatttat agatagggct
     4801 gaaagtatag caaatagtaa gagttttttt tgctagattc attatgaccc gaattataaa
     4861 gaaaatatat aaggatttct gttaactcgt tgtctgaaat tattttgaga gatcaatggt
     4921 acaaatagca aaatcgattc aagcataata ataataatca aaaatacaga agactatttt
     4981 ttctttgcat aaaacctacg ttccaaaaaa gtttttctat tatttgtcat aatggtaaag
     5041 gtgtacagac atattccttg ggcatattat tttgtaggtt aaaaatcatt ttgaagatta
     5101 tcgctcagtt tagagttgca tctttgccat gctaaaagag aagatataac aatagaacat
     5161 gtattgcctg atcaaaaatt aaacgaaaga catatgatat aaagtaaata tctcaaagat
     5221 aaaatgacaa caacgacaag ttaccctagt taattaatgg aacatagcca ttatatttat
     5281 atcaataacc agtaaactct tcaattttga ttctttcttt tggaatttct aaatcttctt
     5341 ggagcaaaat ttgcatagct tttagcatac taggaggacc acatatataa aatattgaat
     5401 tatttagtat gttagtgtct acatacttta aaatcattgc tttgtttatt cttccatact
     5461 cccctttcca atcatcagtt gcagttcttg atgatgatga tgataatgat gattgtttgt
     5521 cattttgatc tttattatca ctaatggtat agataatctt taaatttcta ttcaaacttg
     5581 cccattgatc aaactctttt ttgaatagga tgttgttacg attcctatta gaatcaaaca
     5641 ttattatttt tactggcaat ttcatgtctg tggcatattt tatcatactt ctaaatggag
     5701 taacacctat tccaccagaa agaaatacaa cgggatttgt ataatcttga tgtaatacaa
     5761 attttccttc cggtcctctc accttgactt tggtaccctt ctctaaagtt gaaagtcttt
     5821 ttttgtatgg tgaatctctg attctagtac tgaacattat aaaattctca gtgggagaag
     5881 atgaaatagt aaaatgtcta attggacctt tgggatcatt atagacttcc cctatatcaa
     5941 aaaatgcaaa ttggccagca ttataatcta atagtgtttt gttttcatca tgattaccaa
     6001 tattcttatt aaacttaaat gacattacat ccgtaccttc aactttatct ttttctatta
     6061 gagtgagctc aagctggttg ggaggagatt tacttttttt actatcttgt ttctttatta
     6121 atatattatt accatctact tttatttgat aaactggttc tggttcactt gcaggaggtt
     6181 ccttcgcctc acctgtcctt acatcaaatt tggaagcatg ccatggacat tcaacttcat
     6241 aaccttcaag attaccatcc gccagaggac caccttcatg agtacaaata ttgccaatag
     6301 catagtattt tccttcaacg ttgactatac aaatactttc tccatcgact tgaacttctt
     6361 tcatctggga aggttgaata tcatttgtat caccaacctt aacaaaatca tcctcatcct
     6421 cactcacaat tgatcgtttt cattataatg tccaaattct atatactttt ctacctaaaa
     6481 atttctagat acaaaaatga tcttaggctt tgaacaagta ttattatttt tccactgtct
     6541 tgtgagccaa tagatatgat ttgactatct ataatacttt tttttcttct aatctatttt
     6601 agttgtaatt tgttagattg taaatattct tttaatgcaa tagcattatt gtatttttcc
     6661 tcttttgagc tatagagtaa agttattgtt ccttgttcag ctttttctaa gaataattta
     6721 acaatttctt ttctatcttt tagttcctcg taataacgcc ttttgaattc atcccatttt
     6781 ctttgatcgt gattaaacca ttttcttatt gcattgctgg gagctatgtc cttttgccat
     6841 aaatcgattt taacgtcatt tttctttact ccacgaggcc agattctgtc aactagtatt
     6901 ctaaaaccat catctgcgtc cggtttatca taaatacgtc ttgtcttaat cataacatat
     6961 caatctaatt atagaagaat attttaggtc tattaaattc tgcatatttt tagtaagaat
     7021 tagtttcaat aatagaatca aaagtttttt gattattatt atttttttta tcaacaaaaa
     7081 taaacaaaat tgcaatcaac aatatatatg taacaatcgg atcagacggt tcgtccattc
     7141 atatatgcaa tataatgacc aaaacaaatt ttattcaata gggtagatgg atagattaat
     7201 cttaagttat aagaataaaa tatagatcat acaaatagat ttcattaata tttaatgtca
     7261 tattattgtt tttagtatta ttgatcaaac tagagcagca aagttgtatt tgatttgaac
     7321 tttacaaata acatcataaa atttatttta acgtatgttc gaattttgag accaaactgt
     7381 tgactgtatc tagttctatc ttatgttctg gcagattttc tattggacat gcgtcaattg
     7441 aaaatctcaa taatgcaatt attgttttaa tttcat
//
LOCUS       DATIAS010000559         2685 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_646031, whole genome shotgun sequence.
ACCESSION   DATIAS010000559 DATIAS010000000
VERSION     DATIAS010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_646031"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VLA74_11155"
     CDS             complement(<1..248)
                     /locus_tag="VLA74_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51308.1"
                     /translation="MLILPTISVLVSLIAQYFYPKDILFFIVIFFYLLILFIVTIGYS
                     LYPLFVNAEKFFEKVDDKRVIEFEFIKKILLIEFPILIG"
     gene            complement(386..1240)
                     /locus_tag="VLA74_11160"
     CDS             complement(386..1240)
                     /locus_tag="VLA74_11160"
                     /inference="COORDINATES: protein motif:HMM:NF014180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51309.1"
                     /translation="MSPVKQYNNRYKSLSDMERAKKSLYKIILIMALMLIVLNGTGFF
                     SLSILLTNAQISKGSQFTLPVILIHGYLSDASVWNTWQDLLKKDNISAYPITFTHSDD
                     KCGSVTEHAIELSNLIGEIKKESGQNKVNIVGFSKGGLDARLYLANNTLNTDVANLIM
                     IGTPNAGSPLANTNNICLPAVEDLRPGAKPTKAEENNNTEYYTIAGDWNPFLLVNCPQ
                     LEWLPAEIMGYLPLLGREGSNDGIVSISSVESLENFTKLGYTPNCHSNLLGEKEYELA
                     RNVLLNNS"
     gene            complement(1572..1697)
                     /locus_tag="VLA74_11165"
     CDS             complement(1572..1697)
                     /locus_tag="VLA74_11165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51310.1"
                     /translation="MNAIYFMYITGYNSIFVSLYNETIANNNNSDFGLDEMRILS"
     gene            complement(1740..1904)
                     /locus_tag="VLA74_11170"
     CDS             complement(1740..1904)
                     /locus_tag="VLA74_11170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51311.1"
                     /translation="MIRSLVEKNDNHIVYPDGGTWYDEACNLLRLKHYLHSQLEREKS
                     NGKSQSAFQR"
     gene            2296..2493
                     /locus_tag="VLA74_11175"
     CDS             2296..2493
                     /locus_tag="VLA74_11175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51312.1"
                     /translation="MIKNKIGILLIGLFFLVGLFTITTIPTSLPDNTSKVRDSNIAYF
                     YILNPPFGPCTALPEERSSGH"
BASE COUNT          946 a          427 c          353 g          959 t
ORIGIN      
        1 ccaataagta taggaaattc tatcaaaaga atttttttaa taaactcaaa ttcaataact
       61 cttttatcat ctactttttc aaaaaacttc tcggcattga caaagagtgg atatagacta
      121 tatcctatag taacaataaa aagaattaag agatagaaaa atataacaat aaagaacaaa
      181 atatcctttg gataaaaata ttgagctatc aaactaacaa gtacgctgat agtaggaagt
      241 attagcaaga caattattgg aatctttatg gcataaaaat aagacagatt ctatcatcac
      301 cctataaata ttatctttat tgagtccaat caaaaatact tttaggttat gagcatagta
      361 acttttaaaa tataaaaatt gaaagtcaac tattatttaa caacacattt cgtgccaatt
      421 cgtattcctt ctcgcctaaa agattagaat gacaatttgg agtatatcca agtttagtaa
      481 aattttctag tgattctaca cttgatattg acactattcc atcattactt ccttctcgtc
      541 ctagaagagg taaatatccc attatttcag caggcagcca ttcaagttga ggacagttaa
      601 ctaataaaaa tggattccag tctccagcaa tagtataata ctcagtatta ttattttctt
      661 ctgcttttgt aggttttgct ccaggtctta aatcttctac agctggcaaa catatattat
      721 tggtatttgc taatggtgac cctgcatttg gtgttcctat cattattaga tttgcaacat
      781 ctgtatttaa agtattattg gccaaatata atcttgcatc taatccacct ttactaaaac
      841 caacgatatt caccttgttt tgtccacttt cttttttaat ttctccaatt agatttgata
      901 attctattgc atgttctgta actgagccac atttatcatc tgagtgtgtg aatgttatag
      961 gataggccga gatattatct tttttaagta aatcttgcca tgtgttccat acggatgcat
     1021 ctgatagata tccgtgtatc aaaattactg gaagagtgaa ttgacttcct ttagaaattt
     1081 gagcgtttgt taaaaggata gatagagaga aaaagccagt accattcagt actatcaaca
     1141 ttaatgccat tatcaatatt attttataca gtgatttttt cgctctttcc atatctgata
     1201 aagacttgta tcgattatta tattgtttta ccggactcat gttatagttt agttgacaat
     1261 taaaatctaa taataatact attaatgtta ccttaaggta tagaaataaa cgaattcttt
     1321 tacttccagt aataaagtta taaccatgta taaaacttat taatacaacc aagattaatg
     1381 aattaaatca atgacaatta ttcattagat gctcacacag gatcgttttt ttaaataaaa
     1441 ataatttttt caaaatagtg aacccgagaa aagtatggac ccgttgggag ttgaatggtc
     1501 atggtttcga tgttcactca atcgttaaga gaatataata aattaaaagg tgcattgacg
     1561 accctgttaa tttaagataa tattctcatc tcatctaacc caaaatcact attattatta
     1621 tttgctattg tctcattata cagagataca aagatagaat tgtatccagt tatatacata
     1681 aaatagattg cattcaattt gcatacatgg ataatatagt catcaaaaat gattcaattc
     1741 tatctttgaa atgctgattg actctttcca ttagactttt ctctctctaa ttgtgaatgt
     1801 agataatgtt tcaatctcag tagattacat gcttcatcat accaagtacc accatcagga
     1861 taaactatat ggttgtcatt tttctcaact aatgatctga tcaatcttta agcaacaagc
     1921 atatttctct cttctgaaat gtagatatgc actgaactat gaattggttc tatacaaaac
     1981 aataaccaaa aatgttggct actaatctga ataacagttt catctattat gaaggttgat
     2041 atccttttgc gtttgtaaat ctgtaaagaa acaaatctct gaatccaatt ccaaacatat
     2101 acataacttc atttttcatc cttaaaaatg actaacgctt tggaagtatt tcgtagaaag
     2161 accgagaaaa tacaaatata aagaatacat tacaataact gtggatgttc tattttgaga
     2221 atattgattg aaagaattac gatataagca cataaaaaac tttaatattt ttaggaatat
     2281 attaattaca aatagatgat caaaaataaa ataggcatat tattgattgg attgttcttt
     2341 ttagtaggtc tatttactat aaccaccata ccaacatcac tcccagacaa tacctctaaa
     2401 gtaagagata gtaacatagc ctacttttat attctcaatc ctccatttgg tccttgcaca
     2461 gctctacctg aagaacgttc atctggtcac taacgttttc tagcaataag taatatatga
     2521 aatgttttta atattatata gatcttattt tagctatcat ttatggttta atgattttta
     2581 ataaattaat aattatctgg tcccacttta tagaagggtt caaatcccac agaacccttt
     2641 tcctagtata ttcacaatat tattttgatt gttttctttc tattt
//
LOCUS       DATIAS010000560         3885 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1463480, whole genome shotgun sequence.
ACCESSION   DATIAS010000560 DATIAS010000000
VERSION     DATIAS010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3885
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463480"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..722
                     /locus_tag="VLA74_11180"
     CDS             144..722
                     /locus_tag="VLA74_11180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51313.1"
                     /translation="MISLSAIFFTEVYNEVELIYGEDSNSQFKDNSTNWMPYSGARFS
                     LMYPENWKVEEKISKFHILDLNLLKVIDGNRTSFIGISFDTLPDSDKLSNELVLEQSE
                     DFGKFGSSSYYTVYEVLEKNLTKYNIDGNPSASHIVKYVFRENNLGGKLLEIFSIIDK
                     KLFTLIYQSTTQNFDKELPIIDRIISSIKVVS"
     gene            898..>3885
                     /gene="ileS"
                     /locus_tag="VLA74_11185"
     CDS             898..>3885
                     /gene="ileS"
                     /locus_tag="VLA74_11185"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HSF51314.1"
                     /translation="MVLDAHFNAKLIERKIRDHMELIQFNKFIKNEIENRDNQKVLGY
                     VDGPPTMNGDPHVGHLRGRIIKDLWFRFNVLKQNKVVFRPGWDTQGLPVELQVEKELG
                     LTGNKSDNIDRVGIEKIVQSCKSLVKKYNEKWVHVDKLLGMSFDYERGYWTYYDQYME
                     REWSYLKKAWDNGILQEGFRVVAFCPSCQTSLSNSEVNQGYDTVEDPSFYYKVKLVED
                     DSYLIVWTTMPFTLITDELTAVNPDANYVYVKVNNEVWIIGETRLNDLMKELQIDKYE
                     TIKISQGKNLDGKYYIHPLLDLIPGLKDLSNSRSIHFVVSEDFVDVTTGSGIVHLSPA
                     NGEDDFNIAKKRNVPIFVPIDDRVFFTEAAGEFKDLFVRDADQKIIDIMNELGAAVKI
                     GRIKHQYPTCWRSHHKLVWLARREYFYMIDKLGDKPLEAATNVEYFFDAPKNRFLEII
                     KEKVPWCISRERIWGTPLPIWTCENCGAKELLSTKKELVDRSQNLLFMDNENIIIKFK
                     KQNKEEDVKTAYSRDVSVIDKYYFELHRPWIDRVEINCLKCNSRMVREPFVLDTWHNS
                     GSAPFASFSDTEYNNLIPAVFLTEGIDQTRGWSYSLLMQNVILNNASTAPFQSFLFQG
                     HILDEKGNKMSKSAGNVIEADFLLDQNPVDLIRFYFIWKSSPIEALNFSLKEMASRPY
                     QVLSTLYYLHVYLKQNSVLDNFDRKKHNFEWTLQNNLLELPEKWLFSVLQKLILYVNN
                     SFENCRFHEGTKAIEEFIINDISQTYIPLTRNYIWNDSIEEINRRLAIFATLDYVLEK
                     VDVILHPVSPFLTEYLYLNCFTNIQKASILLCKWPEPLNDLINKVLENTFGKIKEIIS
                     ISNSARMKAKLKRRWPLSNIVICQFHEKNDSTNERITLEQEFSKSEISEILKSQLNVE
                     TFKIIEISANNEIEKILGLLEAGIPIIPSVSLIKKNIAPQVKSDIGKVIAKFEKLDKI
                     EILKSLQDSESFKIIYDDLSLSSI"
BASE COUNT         1391 a          545 c          677 g         1272 t
ORIGIN      
        1 taattttaaa gatatcttga cttttttcac tccattcaaa catcgagtga gaaagaattt
       61 attaattgtg atttctttta gttttattgt taatgtttaa tattttcagc tttcgttttt
      121 ttcccttttt actctctgct cttttgattt cactgtctgc aatttttttt acagaggtat
      181 ataatgaggt agaattaatt tacggtgaag attcaaattc ccagtttaaa gacaattcca
      241 ccaactggat gccttatagc ggtgcaagat tttctctcat gtatccagaa aactggaagg
      301 ttgaagagaa aatatcaaaa ttccacatat tggatctcaa cttgcttaaa gtaatcgatg
      361 gcaatcgtac ttcctttata gggatttcct ttgatacgct cccagattca gataaattat
      421 caaatgaact tgttcttgaa caatcagaag attttggaaa atttgggagt agctcttatt
      481 ataccgttta tgaggtttta gaaaaaaatt taaccaaata taatatagat ggtaatcctt
      541 cagccagtca tatcgtgaag tatgtattta gagaaaataa cctcggtggt aaacttcttg
      601 aaatattttc gatcatagat aaaaaattgt ttacattaat atatcaatcc acaacacaaa
      661 attttgataa agaattaccg ataatagaca ggataataag ttcgataaag gtagtgtctt
      721 aatattatta ttattgtagt atagattttg gttaatgtag ttatattggt ctacgtgatc
      781 taagttataa tatattaatc aattttcttt tctttttgat agtttatatc taaatcgatc
      841 agctgaattt acttatccaa aaacataaag aatggttatt agaatctttt tgtgtttatg
      901 gtacttgacg cacatttcaa tgctaaactc attgaaagaa aaattaggga tcacatggaa
      961 ctaatacaat ttaataaatt tataaaaaat gagatagaaa atcgagataa tcaaaaagtt
     1021 ctgggttatg tagacggacc tcctacaatg aatggagacc cccatgtagg acatttacgc
     1081 ggaagaataa tcaaagatct ttggtttagg tttaatgtat taaaacaaaa taaagtcgtt
     1141 tttagaccag gatgggatac tcaaggttta ccggtagaac ttcaggtgga aaaagaattg
     1201 ggtttaacag gaaataagag tgataacatt gatagagttg gtatagagaa aatagtacag
     1261 tcatgtaaat ctttagtcaa gaaatataat gaaaaatggg tacatgttga taaacttctc
     1321 ggtatgtcat ttgattatga aagaggatat tggacctatt atgatcaata tatggaaagg
     1381 gaatggtcat atttgaaaaa agcttgggat aacggaattt tgcaagaagg gtttagagtg
     1441 gttgcatttt gcccatcatg tcagacttct ctaagtaact ctgaagtcaa tcagggatac
     1501 gacactgttg aagatccatc tttttactac aaggtaaaac tggttgagga tgattcatat
     1561 cttattgtgt ggactaccat gccttttact ttaataacag atgagctaac tgcagttaat
     1621 cctgatgcta attatgtcta cgttaaagta aataatgaag tttggataat tggtgaaaca
     1681 agattgaacg atttgatgaa ggaactacaa attgataaat atgaaactat caaaatttca
     1741 caaggtaaaa atcttgatgg aaaatattac atccatccat tactggacct tattcctgga
     1801 ctaaaagatc tctctaattc cagatctatt cactttgtcg tatctgaaga ttttgtagat
     1861 gtcactactg gtagcggtat agttcatctc tcacctgcta acggggaaga tgatttcaac
     1921 attgctaaaa agagaaatgt tccaatattt gttccgattg atgatagagt attctttacc
     1981 gaagctgcag gtgagttcaa ggatctgttt gttcgggatg cggatcaaaa aatcatagat
     2041 attatgaatg aattaggagc tgctgtgaaa ataggtagaa taaaacacca atatccaaca
     2101 tgttggagat cacatcataa acttgtatgg ctagcaagga gagaatattt ttatatgatt
     2161 gataaattgg gagataaacc tttagaagca gcaaccaacg tagagtattt ttttgatgca
     2221 ccaaagaata gatttctaga aataatcaaa gaaaaggttc cttggtgtat ttcaagagaa
     2281 cgtatttggg gaacccctct tccaatctgg acctgtgaaa actgtggagc aaaagaactg
     2341 ttatcaacta aaaaagaact agtggatagg tcgcagaatc ttttattcat ggacaatgag
     2401 aacataataa tcaagtttaa gaagcaaaat aaagaagagg atgttaagac agcttatagt
     2461 cgggatgttt cagttattga taaatattat ttcgaattgc atagaccttg gattgataga
     2521 gttgaaataa attgtcttaa atgtaattcg agaatggtta gagaaccttt tgtgcttgac
     2581 acttggcaca atagtggatc tgccccattt gcatccttta gtgatacaga gtataataat
     2641 ttgatacctg cagtattttt aaccgaggga atcgatcaaa ctagagggtg gtcgtactca
     2701 ttgttaatgc aaaatgttat cctgaataat gcttctactg caccattcca atcttttctt
     2761 tttcaaggtc atatattaga tgaaaaagga aacaaaatga gtaaaagtgc gggaaatgtt
     2821 attgaagcag atttcttatt agatcaaaat ccagttgatc taatcagatt ctattttatc
     2881 tggaagtcat ctccaattga agcattaaat ttcagcctta aagaaatggc ttcaagacca
     2941 tatcaggttt taagtacatt atattatttg catgtatatt taaaacaaaa tagtgtattg
     3001 gataatttcg atagaaaaaa gcataatttt gaatggacct tgcaaaataa tctattagaa
     3061 ctaccagaaa aatggttatt ttccgtatta caaaagttga ttttgtatgt gaataattcc
     3121 tttgaaaatt gtagatttca tgagggaaca aaagctatag aagaatttat tataaatgat
     3181 atcagccaaa catatatccc acttacaaga aattatatct ggaatgatag catcgaagaa
     3241 atcaatagaa gattagcaat atttgcaaca ttggactatg ttcttgaaaa ggtagatgta
     3301 attcttcatc ctgtctcacc ttttctaaca gaatatttgt atctaaattg cttcacaaat
     3361 attcaaaaag caagtatatt actttgtaaa tggcccgaac cactgaatga cctgataaac
     3421 aaggttcttg aaaatacttt tggaaaaata aaggaaatta tctctatatc aaattccgca
     3481 agaatgaaag ccaaacttaa acgccgttgg cctctttcta atattgtcat atgtcaattt
     3541 catgaaaaaa atgattccac aaatgaacgt atcacacttg aacaggaatt ttcaaaaagc
     3601 gaaatatcag aaatcttgaa aagccaactt aatgtcgaga cttttaaaat aatagagata
     3661 tctgcaaata atgaaattga aaagatcctt ggcttattag aagcgggaat cccaattatt
     3721 ccatctgttt ccctaattaa aaaaaatata gcaccgcaag tcaaatctga tattggtaag
     3781 gtaattgcaa aatttgaaaa gctggataaa attgaaattt taaagtctct acaagattct
     3841 gaaagtttta aaataattta tgacgatctt tccttatctt ccatt
//
LOCUS       DATIAS010000561         4676 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_919303, whole genome shotgun sequence.
ACCESSION   DATIAS010000561 DATIAS010000000
VERSION     DATIAS010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4676
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919303"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VLA74_11190"
     CDS             complement(<1..681)
                     /locus_tag="VLA74_11190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51315.1"
                     /translation="MNETELKQLFKSSIKNRHIQNNHHLPIHISDYQSHQIKIKEEAY
                     FGNFDFVIVIVHKNNENQGDIDNTYIGTARKDLFFQDEGGDDDDVYQNIRMRTHQFIQ
                     IAKQEKCSIKNLTFIPVEVKSDSDVLDNRLPNQILNAILTFGRSFLVLDEKHISKNLH
                     LLKLLPTTIIGYTGKDDFFEVLSVFDRFVMNGIFSIPKRSFNKLLLDSKVTKQFSDID
                     KIYKSLVTL"
     gene            834..1403
                     /locus_tag="VLA74_11195"
     CDS             834..1403
                     /locus_tag="VLA74_11195"
                     /inference="COORDINATES: protein motif:HMM:NF020014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51316.1"
                     /translation="MLHYTKPLTAYEYLNILAFHINNESIELRYGDKISFVDCDELVS
                     DIIVKGLLPKRYGGLESSNVLVITSNNKFDFYQCVNLAKKKYGMDVNKVLDHVIITRV
                     FTIYQLAETLIHELFELMEKFQSKLLVIISDLFLLNSVKQQIAQEEKDWIVKQITKSL
                     NNINNSIVTVFSSITIPDFKNHKKPQKKR"
     gene            1659..1913
                     /locus_tag="VLA74_11200"
     CDS             1659..1913
                     /locus_tag="VLA74_11200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51317.1"
                     /translation="MNLFPYEDILTKEIDSWKSYSDCLRKKDRELFDQMLKNCYQYSE
                     SISAKGRDYSTESLLMTLLFEQYKRTTSTTVSTLDGVTTI"
     gene            1961..4135
                     /locus_tag="VLA74_11205"
     CDS             1961..4135
                     /locus_tag="VLA74_11205"
                     /inference="COORDINATES: protein motif:HMM:NF012364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HSF51318.1"
                     /translation="MIFWIKDSKNNTIKIEDTKWNNYFYLASNNTSNLEQIGNLRETE
                     DFIKKTEYVYRYETITDDEKSKVLKIYTQYIASNVKLANIIERKIVKVSGGFRLYNID
                     LLPVQHYFYEHDLFPCGTFDVEESPYGLFWKVLDNDCVSLTDYIVPNFRNIYLKINFQ
                     KGGIPRLSDKLKHITITTTCDKEPKINIQSESEDEIIIQLSKIVKKLDPDIIITENGD
                     SFLFPYLIHRASENNLDLVLGRDSNVTLKKPTKNGVSYFSYGRTYYKPSSIRFYGRWH
                     IDTSSSFLWRETQDVHGLVEISRLSRLPLHETSRATIGKCLTSFHLYNATKKGILVPW
                     KPTMSEYPKTLRELFIADRGGLILEPEIGVHEKVAEFDFVSLYPNIIYKKNISAETIL
                     CQCCYLDSDNKIPELNYHICKRKEGLIPKSLELVLKKRLYYKQLKKTTLNDNLKKIYN
                     ARQSALKWILVTSFGYLGFSNAKFGRIDAHITVCAFARKILLESVKIAEELGFEVLHG
                     IVDSIWIKKENATKNDYIKLKNSIEERTGFEISFEGVYKWIAFLSSEQDNRIPVTNRY
                     FGVFEDGTLKMRGIETRRHDTPLFFSNFQQNILEILASANNRQELRQKLSEIHFLYKK
                     YLLLLRERKVSIEDLIFTKQLSKNYNEYENRNTIENNVLKILTSNKEFTKAGQLLKYV
                     ITYYPGRKAIPLQLVDDKTKYDIDRYSEMLTDIYDSIVKIIN"
     gene            4491..>4676
                     /locus_tag="VLA74_11210"
     CDS             4491..>4676
                     /locus_tag="VLA74_11210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51319.1"
                     /translation="MTQKSLICIYTNKDRNEFAIGLKGDENFRAMTKVGEFYTRFVDA
                     FDQIVDEKEIDWKQELKK"
BASE COUNT         1822 a          642 c          711 g         1501 t
ORIGIN      
        1 caatgtaacc agacttttat atatcttatc tatgtcacta aattgttttg ttaccttact
       61 atcgagtagt aacttgttaa aacttctctt cggaatacta aatattccgt tcattacgaa
      121 tctatcaaat acagacagta cttcaaaaaa atcatcttta cctgtatatc ctataattgt
      181 tgttggaaga agctttaaca gatgaaggtt cttggaaata tgtttctcat caagtactaa
      241 aaatgaccga ccaaaggtta ggatagcatt taatatttga ttagggagac gattgtcaag
      301 tacatcacta tctgatttta cctctactgg aataaacgtt aaatttttta tactgcattt
      361 ttcttgttta gctatttgaa taaactgatg agttcgcata cgaatgttct gataaacatc
      421 atcatcatca cccccttcgt cttgaaagaa aaggtccttt ctggcggtac caatataggt
      481 attgtctata tctccttgat tctcattatt tttatggaca attacaatta caaagtcaaa
      541 attaccaaag tatgcttcct cctttatctt tatttgatga gattgataat ctgaaatatg
      601 gataggtaga tgatgattat tttgaatatg tctgttttta attgaacttt tgaataattg
      661 cttaagttct gtttcattca tagattgata actataatgg attcatttac taaataataa
      721 ttgtagtata tcaataatat ttgacttgat gtaaagattt ctggtatctt atacacaact
      781 tcatatagca atacttttat aatttcatta ccgtaaagta cggtatgaaa acggtgttac
      841 actatacaaa accgttaact gcctatgaat atttaaatat actggctttc catataaaca
      901 atgaatctat tgagttaaga tatggtgaca agatttcctt tgtagattgt gatgaattag
      961 ttagtgatat aattgttaaa ggattacttc caaaaagata tggtggtcta gaatcttcaa
     1021 atgtacttgt tattacaagc aataataaat ttgattttta tcaatgtgta aatctcgcaa
     1081 agaaaaagta tgggatggat gtcaacaagg ttttagacca tgtaataatt accagagtgt
     1141 ttaccattta tcaattagca gagacattaa ttcatgagct ttttgaatta atggaaaaat
     1201 tccaatcaaa attattagtt attatttctg atctatttct cttgaattcg gtcaaacagc
     1261 aaatagcaca agaagagaaa gattggattg ttaaacagat tacaaaatca ctaaataata
     1321 tcaacaattc tattgtaact gttttctctt ctatcactat accagatttc aagaatcata
     1381 aaaaaccaca aaaaaagaga tagaacgtga atataaatgg gtagaactat tccctcattt
     1441 agaatagcaa ttgatctcga acaaaaggaa tggaaatcat atcaaaaata tctgaatcta
     1501 gaaaagagaa aattatttag agaaatgttt tcaattgcca ggttatacaa ttctgcttgt
     1561 tcttattgta gcaatcccat tagaatatat cctattttat tatctattat ttttaatcaa
     1621 tacaagtctt taaaaaaaaa gacgaatgtg atatcaagat gaatctattt ccatatgaag
     1681 atatactaac aaaagagata gactcatgga aaagttattc agactgtctg agaaaaaaag
     1741 acagagaact atttgaccag atgctaaaaa attgttacca atattcagaa tctatcagtg
     1801 caaaaggaag ggattattca accgaatctc tattaatgac acttttattt gaacaataca
     1861 agcgaacaac atctactact gtttctactt tagatggagt gactacaatt tagttaaaac
     1921 aactggatgg atttttgacg cttaccattt agataacaaa atgatttttt ggattaaaga
     1981 ttccaaaaat aatacaataa aaatagaaga caccaaatgg aacaattatt tttatttagc
     2041 atccaataat acttctaatt tagaacagat aggtaatctt agggagacag aagatttcat
     2101 taaaaaaact gaatacgtat atagatatga gacaataaca gatgatgaaa aatccaaagt
     2161 attaaagata tacacgcaat atattgcaag taatgtaaaa cttgcaaata tcatagaaag
     2221 gaaaatagta aaagtatctg gaggatttcg attatacaat atagatcttt taccagtaca
     2281 gcattatttt tatgaacatg atttatttcc atgtggaacc tttgatgtcg aagagtcccc
     2341 gtatggatta ttttggaaag tacttgataa tgattgtgta tctttgacag attatatagt
     2401 accaaatttt agaaatattt atttaaagat taactttcaa aaaggaggga taccacgatt
     2461 atcagacaaa ttaaaacata ttactattac tacaacttgt gacaaagaac caaaaataaa
     2521 tattcaaagt gaatcagaag atgaaataat tatacagtta tccaagatag taaaaaaatt
     2581 agatcctgat ataattataa cagagaatgg agattcattt ctttttccct atctaattca
     2641 tagggcatca gaaaataatc tagatttggt acttggtaga gattctaatg tcacactaaa
     2701 aaaacctacg aaaaacggtg tctcgtattt ttcatatggt agaacatact ataaaccatc
     2761 tagcatcaga ttttatggta gatggcatat agatactagt tcctcttttc tttggagaga
     2821 aacccaagat gtccatggac ttgttgagat ttctagatta tcaagacttc ccttgcatga
     2881 gacctcaaga gcaacaattg gtaaatgctt gacaagtttt catctttata acgcaacgaa
     2941 aaaaggtatt cttgtaccct ggaaaccaac aatgtcagaa tatccgaaaa cattaagaga
     3001 actttttatt gcagatagag gaggtctcat actagaacca gaaattggag tacatgaaaa
     3061 agtagccgaa tttgattttg tatctttata tccaaatata atatacaaaa agaatatctc
     3121 agcggagaca attctatgtc aatgttgtta cctggattca gataacaaaa tacctgaatt
     3181 aaactatcat atctgtaaaa gaaaggaagg attgattcca aaatcactgg aactagttct
     3241 caaaaaaaga ttgtattata aacaattgaa aaagacaact cttaatgata acctaaaaaa
     3301 aatatataat gcaagacaat ctgcattaaa atggattctt gtaacgtctt ttggttatct
     3361 tggatttagt aatgcaaaat ttggaagaat cgatgcacat attacagtct gtgcttttgc
     3421 tagaaagatt cttcttgagt cagtaaagat agcagaagaa ttaggattcg aagttttaca
     3481 tggaattgta gattcaatat ggataaaaaa agaaaatgct acaaaaaatg attatatcaa
     3541 attaaaaaac agtattgaag aaagaaccgg atttgaaata tcctttgaag gtgtctataa
     3601 atggatcgcc tttctatctt ctgaacaaga caatcgcatt cctgttacaa acagatactt
     3661 tggtgttttt gaagatggaa cattgaaaat gagagggatt gaaactagaa gacacgacac
     3721 gccattattt ttttcaaatt ttcaacaaaa tattcttgag attcttgcaa gtgctaataa
     3781 tagacaagaa ctaagacaaa aattgtcaga aatccatttt ctttataaaa aatacttatt
     3841 gctacttaga gaaagaaaag tatcaataga agatttaatt tttacaaaac aattgtctaa
     3901 aaattataat gaatatgaaa atagaaatac cattgaaaac aatgtattaa agattctaac
     3961 atctaacaaa gaatttacaa aggcaggtca acttctaaaa tatgtaataa cttattatcc
     4021 aggacggaaa gcaataccat tacaacttgt agatgataaa actaaatatg atatagatag
     4081 atattccgaa atgctaacag atatttatga ttcaattgtg aaaatcataa attagggagc
     4141 ataaagagaa actatatttt tcattgttta taaaacatag taaatgtaaa attatagatt
     4201 aattctaatt ctgaatatgt atcctaaata aacagctgaa cgaatacaac caattagcaa
     4261 atcatttgtt attagtgcaa tatgcggatt gtttttatgt catatgatcc gttctaatca
     4321 atctaagata ataaaaatct aaataatgca ttagagttga cgacagcagc agcagcagca
     4381 gcagcagcag tgtaggtatt aactaatttc taaaaatcgc tgtattgatt cagaaaagtc
     4441 aaaaaaagat aactataatg ataacaatat gataacaata acataacgct atgactcaaa
     4501 aatcactaat ttgtatatat acaaacaaag acagaaatga atttgctatt gggctcaagg
     4561 gagatgagaa ttttagggca atgaccaaag taggtgaatt ttatacaaga tttgtagacg
     4621 cttttgatca aatagtggac gagaaggaaa ttgattggaa acaggaatta aagaaa
//
LOCUS       DATIAS010000562         8915 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1055456, whole genome shotgun sequence.
ACCESSION   DATIAS010000562 DATIAS010000000
VERSION     DATIAS010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8915
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055456"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VLA74_11215"
     CDS             <1..368
                     /locus_tag="VLA74_11215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51320.1"
                     /translation="IILTIPLLFSAILLVTSTITASASITNYFKEQDEDDYENKFYRE
                     KYREKIYRQGALCDEPQSIKKHGEICKGHGNSFEDVKEECKDKGGEWDNGKCKFEDDE
                     DETDFEEEFEEEEEEIEED"
     gene            445..615
                     /locus_tag="VLA74_11220"
     CDS             445..615
                     /locus_tag="VLA74_11220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51321.1"
                     /translation="MEISNKNSEKQPGSSIEDFHKKNDNKRVILGDDEEIIIIIQIFI
                     FYGLENLSSLYL"
     gene            653..1099
                     /locus_tag="VLA74_11225"
     CDS             653..1099
                     /locus_tag="VLA74_11225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51322.1"
                     /translation="MKLIFDDPTFSLQLLRIISETYYKGADIGECLSTAYRIKESDFE
                     SWYNEWFKTAKRVNDYAQECLKLRHKISAKEAFLRASNYYRPAEFFIIDPNDVRSLET
                     CGLSKECFKQAAQLFSSHIEQIEIPYEQTKLPGYFFKVDDDNFKER"
     gene            1074..1598
                     /locus_tag="VLA74_11230"
     CDS             1074..1598
                     /locus_tag="VLA74_11230"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSF51323.1"
                     /translation="MMIISKKDKIKNKEQRTILVVHGGFDSTLEELYFSAVALALERG
                     YNCIAFEGPGQGGVIRKQKIPFRFDWEKVVTPVIDFLMSDNIKYGIDTNRIALMDISM
                     GGYLAARAAAFEHRLSACVLYNGVYDGKEALESSFHSPLLKAIKDGNEKVVNIFEILM
                     ETNSNIKFNIKHGM"
     gene            2729..3748
                     /locus_tag="VLA74_11235"
     CDS             2729..3748
                     /locus_tag="VLA74_11235"
                     /inference="COORDINATES: protein motif:HMM:NF017773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51324.1"
                     /translation="MINNSIVLICLILIAILIFIIPLDLSISQESSIKVSTRDHFDLN
                     NGELKPDYTINEYNAINVPGLQVGNCPDESVIYVHGFLRNEYQAQEEAERINLVLRDK
                     NYLIPVISFTWDSNSAPSSLFDFTGGWEEGKKIANANGKKLAQFILDFKGKCSDTDLR
                     IIAHSLGSRVTFSAINSLFNEPLLNFKISSIHLLGAAIDNEQVSIDASDCISNQPQLS
                     CSGKPIEKIVEKFYNLYNPEDNLLQISYPNAEPDSALGLYGNESGIRTPAKNYLEYNV
                     RYEIPISLYDADANYIWDCLEFDLSPTWGDNHCGYMGYRSLINYNKIEDDGAMDLVVN
                     DWKNS"
     gene            4358..4552
                     /locus_tag="VLA74_11240"
     CDS             4358..4552
                     /locus_tag="VLA74_11240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51325.1"
                     /translation="MFQHHNEYEFKKIIDEFILSSSDNESIKYILRNIDFEVFKLGIS
                     FYQMIFILMQKDAIHNRESL"
     gene            complement(4870..5766)
                     /locus_tag="VLA74_11245"
     CDS             complement(4870..5766)
                     /locus_tag="VLA74_11245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51326.1"
                     /translation="MKLLFQSSFIMLVLVSIITIPSISNSSFSQEEENNQGQKIQSAQ
                     SGTQNLTDKYEWPNIHENVITDFNSNISYPQIANTAFIHPFAVVIGACYIGELVMVAP
                     TAVCRGDEGTPIHISSHSNIQDDVVLHGLETTKEGKNLDNKRFTKDGELLLGNDTRFK
                     EGYSVFVGERTSLAHGTLVHGPAYVGNDTFVGMESLVFNAKIGNNVAIGVSSTITGGV
                     EIPDNKFVPPGSVITTQEQVDKLPDRIGSPYENINKEVIHVNEKLDEGYKELDIEKII
                     GEREKAMEQNMLETSMPSSSTQ"
     gene            6096..6239
                     /locus_tag="VLA74_11250"
     CDS             6096..6239
                     /locus_tag="VLA74_11250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51327.1"
                     /translation="MTDFHFVITGTVKGESKEGALEILKSIMKKSEGIKDISELHIFG
                     KTL"
     gene            6365..7387
                     /locus_tag="VLA74_11255"
     CDS             6365..7387
                     /locus_tag="VLA74_11255"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51328.1"
                     /translation="MSSASHLTNIPSNEHIMLLYSSDDERNNAAVNYINNGLKSGHQC
                     IYASINAYDSESSSNISNLSSKIDNYKENIENGELQIVNFKPYYESALHGDLSPFKML
                     KTELEKTLCQRQSEGKKSAILAFADAACFLAHNKHFVECEVLEKWWHNTTTEWTQNNQ
                     NITVVCPHPGLVLNNPTLSDTKGHLNGMHTITIDLNQSIENQNKKKKTQRILIVEPEP
                     DIQYLYSLYTKQYGFSLSDINIVENGNKCLEYLFSNTDDDNDNDYDIIVLDTHLSDIS
                     GFEVARKIRTKLPNKKIILTTTYPLNNIIDIINSIGIKHEDVILKPFTFSELFSILKE
                     PRILSN"
     gene            7760..8104
                     /locus_tag="VLA74_11260"
     CDS             7760..8104
                     /locus_tag="VLA74_11260"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51329.1"
                     /translation="MVVDDELDICIMLKVVLENNGFIVEDYYNPILVLNEFKSHFYDL
                     IILDIQMPDINGLQLCREIRKKDKKAKICFLTASETIFDTSNEFAGVYTLIKKPIENN
                     NLIRIVNGLLNN"
     gene            complement(8539..>8915)
                     /locus_tag="VLA74_11265"
     CDS             complement(8539..>8915)
                     /locus_tag="VLA74_11265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51330.1"
                     /translation="FYTIPKTNLSKKSQEFIDVVNSLEKYNEFINRYGKHIKTVFAEQ
                     FFEYFAIYEQSAKKDLLTKKEYYAIGHYDANKKYKKRWCIIKNLADLEIDDQKYYSEY
                     IPSIKSSILFYKDNPTKIFDSN"
BASE COUNT         3331 a         1210 c         1251 g         3123 t
ORIGIN      
        1 atattatatt aacaatacca ttactttttt cagccatatt acttgtaaca tcaacaataa
       61 cagcatctgc atcaataacc aattatttta aagaacaaga tgaagatgat tacgaaaata
      121 agttttatag agaaaagtat agagaaaaga tatatcgtca aggtgctttg tgtgatgaac
      181 cacaatctat aaaaaagcat ggagaaatat gcaaaggaca tggaaactct tttgaagatg
      241 ttaaagagga atgtaaagat aagggaggag aatgggataa tggtaaatgc aaatttgaag
      301 atgatgaaga tgaaacagat tttgaagagg aatttgaaga agaagaggaa gaaatagaag
      361 aagactagtt ttttattatt ttaatagatt tacaatttat aaaattggag tgaattgaaa
      421 ttttagagga tttcactaaa cccaatggaa attagtaata aaaactctga gaaacagcca
      481 ggttcctcta ttgaggactt tcataaaaaa aatgataaca aaagagtaat tttaggcgat
      541 gatgaggaaa taataatcat tatccaaatc tttatttttt atggtcttga gaacttgtca
      601 tctttatatt tgtaatataa atacaagtgg ttagtattaa cattaacatt aaatgaaatt
      661 aatctttgat gaccctactt tctcgcttca attactaaga ataattagtg aaacatatta
      721 taaaggagca gatatcggag aatgtttatc cactgcatat agaataaaag aaagcgattt
      781 tgaaagttgg tataatgaat ggtttaaaac agcaaaaaga gttaatgatt atgcacaaga
      841 atgtctaaaa ttgagacata aaataagtgc taaagaagca tttcttagag cctcaaacta
      901 ttataggcct gctgaatttt ttattattga cccaaatgat gtacgtagtc ttgaaacttg
      961 tggattaagc aaagaatgtt tcaaacaagc agcacaacta ttttcatctc atattgaaca
     1021 aatagaaata ccatatgagc aaacaaaact tcctggttat ttttttaaag ttgatgatga
     1081 taatttcaaa gaaagataaa atcaagaaca aagaacaaag aacaatacta gttgtacatg
     1141 gaggttttga ttcgacatta gaagaattat atttttctgc tgttgctctg gccctagaaa
     1201 gaggatataa ctgtatagca ttcgaaggtc ctggtcaagg aggagtgatt cgtaaacaaa
     1261 aaattccttt tcgctttgat tgggaaaaag tagttactcc tgttatagat tttttaatgt
     1321 ctgataatat aaaatatggt atagatacaa atcgtattgc tttaatggac attagtatgg
     1381 gaggttattt agcagcacga gcagcagcat ttgaacatcg tctttcagca tgtgtattat
     1441 ataatggtgt ttatgatggg aaagaggctc ttgaatcaag ttttcactct cctctattaa
     1501 aagcaataaa agatggcaat gaaaaagttg taaatatatt tgagattttg atggaaacta
     1561 attcaaatat caaatttaat atcaaacatg gaatgtgaac ttttggtata gattcaccat
     1621 atgaacttgt aaaaaagagt agtgaattta gtctgaaaga aattgccaat aagataatct
     1681 gtccaacact cgtattaaat gcagaaaaag atgattcttt tccaggacaa cctcaaaaag
     1741 tataatgctc ttacttgtcc aaaaaaatag attttattca cagtagaaga aggagcagaa
     1801 gaacattgtc agtgtggtgc accttcatta tcaaatcaaa ggatttttga ttggttggat
     1861 gcgacattag gaattcataa tgcattagaa aagaagaatt aattatatta ttttttgatt
     1921 tcaagccata aacaatttga tagtattttt tatttcacta ggaagaaaat tattatccat
     1981 gtaaaagtaa attctaaatc ctcttttcag ttcaaatttg gttaataagc cactgcctta
     2041 ctcaatatca actttggttg cttataatta gcataaacaa gttatgtaaa aagctaaata
     2101 taagatagta gtaatagaac cgtactacat ggaagattct actccagtcc agttatttat
     2161 ttattaattc ttataactga taaatataaa tagaggcaaa aatgcctcgc aacccgacgg
     2221 gcccatactt ttctagggct cactatttca gcgataactt caaaatgaaa atgaatatgc
     2281 ctgctagtgt atcaggttta gcagtacgta aatcggattt tttagtataa agaatgacaa
     2341 aaaattcttt atgggacaga aaagttaaat gtttatataa tttttagcat taactcttat
     2401 aatgaatttc ctgtcactct tagtagatat ttttgtgggt cgattatttt taaaaatgct
     2461 cttttggcct tttggctatc gagattagca tcacaatatt ttttttaata agcgattagt
     2521 tctgaattca caaaattata caataacaat gattaaagac ggtagagaaa gtatttggag
     2581 cttgtctagg agagtatttt aaaactccct cttttattta gtactcacaa ggaaacatac
     2641 atatctttct aagctaaaac aaaattatca ggcaacagcc ccacttagaa caatatagtt
     2701 atataattta gttattattt ttattataat gataaacaat agtatagttc taatatgttt
     2761 aatattaata gccatattaa tatttattat acctttagat ttatctatat cacaagaatc
     2821 ttctattaag gtttctacac gtgatcactt tgatcttaat aatggagagt taaaaccgga
     2881 ttatacaata aatgaatata atgctattaa tgttccagga ttacaggtag gaaattgtcc
     2941 tgatgaatct gtaatatatg ttcatgggtt tttacgtaat gaatatcaag ctcaagaaga
     3001 agctgagaga ataaatttag tactaagaga taagaactat ttaatacctg ttattagctt
     3061 cacatgggat tctaattcag ctccttcttc gctttttgac tttactggag gatgggaaga
     3121 aggtaagaaa atagctaatg caaatggcaa gaaacttgct caattcattt tagatttcaa
     3181 aggtaaatgt tctgatactg atttgagaat tattgctcat tcacttggtt cacgagttac
     3241 tttttcagca atcaacagtc tttttaatga gcctctattg aattttaaaa tttcatcaat
     3301 acatcttttg ggtgctgcta ttgataatga gcaagtatcc attgacgcat cagattgtat
     3361 atctaatcaa cctcaattat catgttctgg taaacctata gaaaaaattg tggaaaaatt
     3421 ctataattta tataatccag aagacaatct attacaaata tcttatccta atgctgaacc
     3481 agattcagct ttgggattat atggaaatga atctggcata cgaacaccag ctaaaaatta
     3541 tttagagtat aatgttagat atgagatacc tatttctttg tatgatgcag atgcaaatta
     3601 tatttgggac tgtcttgaat ttgatttatc cccaacatgg ggagataatc attgtggtta
     3661 catgggttat cgaagtctta taaattacaa taaaatcgaa gatgatggag ctatggacct
     3721 agttgtaaat gattggaaga atagttaaat ctaagaataa taatattata aaataaaaaa
     3781 ctcggaagat aaattggata ttccttatgt atatatattc cattttttgt agaatcagaa
     3841 tggcaaaaaa agtgacaatt aaacagttag agaacaattt caattttagg aattctataa
     3901 tcaattacca attttgtatt gtttttatac aatattttga gaaaaatcta ctacaaggaa
     3961 attagataaa taataaatac gataaggaaa atttaaatcc tgtcctcttt actaacacat
     4021 tagactctta tttttgcacc gctatcagta ttaatcccta attgagatat ttctatagaa
     4081 ttcaatatac tgtgaatatc tcttaaaata agtttctaat aataatagct aaatacaagg
     4141 taatagaacc ctactacatg aacggctcta cgaccaaatg gtaaatactt ttctatctct
     4201 aattatcttc tttattcata atattatgaa aattaatttt ttaaattaag attaacttat
     4261 gattagtctt tctagaatgt tattatttct aaatgttagg cattagtcaa caatatttct
     4321 aaaagctctt aataactata ttgataaaat ttactcaatg tttcaacacc ataatgaata
     4381 tgaattcaaa aaaataatag atgaatttat actatcttca tcagataatg aatcaataaa
     4441 atatatttta agaaatatag attttgaggt atttaaatta ggaatttctt tttatcaaat
     4501 gatattcata ttaatgcaaa aagatgctat ccataacaga gaatctctat aagataaatg
     4561 acaaactatt aaataaattt tgatttttat atattttaaa ataagtttct aataataaaa
     4621 gctaaatact gcttagtatt atctctacat tagactctta tttttgcacc gatatcggta
     4681 ttactcccac gtaataaaat aatttccttg aataattatg aaaagtaaat gatactatta
     4741 atttaatgga atgaatttag aaagtataac catctctatc tttcaataaa aataagtata
     4801 attacaacat atacattgat ttagataatt attgatagta ttacaatatt ataaataaat
     4861 aagaaaagtt tattgggtgg aagaagaagg catacttgtc tctaacatat tttgttccat
     4921 tgctttttct ctttctccaa ttattttttc aatatcaagt tctttatatc cttcatctaa
     4981 tttttcattg acatgaataa cttctttatt aatattctca taaggacttc caattctatc
     5041 aggtaattta tctacttgtt cttgggtagt aattacactt cctggtggaa caaatttatt
     5101 atctgggatt tctactcctc cagttatagt actggaaact ccaatagcaa cattatttcc
     5161 tatttttgca ttaaatacta aactttccat tccaacaaat gtatcattgc ctacatatgc
     5221 aggaccatga acaagtgttc catgtgctaa actcgttctt tcacctacaa ataccgaata
     5281 tccttcttta aatctggtat cattacccaa taataattca ccatccttgg taaaacgttt
     5341 attatctaga ttctttccct cttttgttgt ctctaagcca tgtaatacta catcatcctg
     5401 tatgtttgag tgagaagaga tatggatagg tgtaccttca tcacccctac aaactgcagt
     5461 gggagctacc attacaagtt caccaatata acatgcccca attactacag caaatggatg
     5521 aatgaatgca gtatttgcaa tttgtggata agagatattt gaattaaaat ctgtaatgac
     5581 attctcatgt atgttaggcc attcatactt atcagtaaga ttttgtgttc cagattgtgc
     5641 tgattgtatt ttttgtcctt gattattctc ttcttcttga gaaaaactac tattgcttat
     5701 tgatggtatt gttattattg atactaatac cagcattata aatgagcttt gaaaaagtaa
     5761 tttcattttc atttcataga aatatttatt ctctatttat ggttttttgt aaattatagt
     5821 tttttgtcaa atattttagt aaatatgtaa aaaacaaatt tgcttcttat ttatttcatt
     5881 aataaatttt taataattta acatataatg atgcgtcaac aattgagttt ctaatagtaa
     5941 aagctaaata caagatagtg gtagaatatc tacattagac tcttattttt gcaccgctat
     6001 cagtattact cctaccataa taacaatata aatattcaat tttgaaaaca taacttacaa
     6061 ttatatttat cataatatta tcagttaaac aaacaatgac agactttcat tttgtaatta
     6121 ctgggacagt aaaaggtgaa tctaaagaag gagccttgga aattctaaag tcaattatga
     6181 agaaaagcga agggataaaa gacataagtg aacttcatat ttttggaaaa actctctaac
     6241 gattttttga ttttaataat aatgatttga agtatagaat gataatatct attaaaatga
     6301 atttagaaga aaacatcaat ttgtctatca tttatataca ctttgtgcct aatgtaccat
     6361 gtccatgtca tctgcttctc atttaacaaa tattccttca aatgagcata taatgttgct
     6421 atatagcagc gatgatgagc gtaataatgc agctgtaaat tacattaata acggattaaa
     6481 gagtggacat cagtgtattt atgcgtctat caatgcatat gatagtgaaa gtagctccaa
     6541 tatttcgaat ttatcctcta aaatcgataa ttataaagaa aatattgaaa atggtgaact
     6601 gcaaattgtt aattttaagc cttattatga atcagcacta catggagatt tgtctccttt
     6661 taaaatgcta aagacagaat tggaaaaaac tctatgtcag cgccaatctg aaggaaagaa
     6721 atctgcaata ttagcctttg ctgatgcagc gtgtttctta gctcataata aacactttgt
     6781 ggaatgtgaa gtattagaaa aatggtggca taacacaaca actgaatgga cacaaaataa
     6841 tcaaaatatt actgtggtat gtcctcaccc tggactagtc cttaacaatc ctacattatc
     6901 agataccaaa ggccacctta atggtatgca tacaataacg attgatttaa accaatccat
     6961 agaaaaccaa aataagaaga aaaaaactca acgaatcctt atagtcgaac cagaacctga
     7021 cattcagtat ctttattctc tttatacaaa acagtatggc ttttcacttt cagatataaa
     7081 tatagtagaa aatggcaaca aatgtttaga atatctattt tctaatacag atgacgacaa
     7141 cgacaacgac tatgacatca ttgtactaga tacccatctt agtgacattt caggctttga
     7201 agttgcaaga aagattcgta ctaaacttcc aaataaaaaa ataatattaa ccacaacata
     7261 tccattaaat aatataatcg atataataaa ttcaattgga ataaaacacg aagatgtgat
     7321 tttaaaacct tttacctttt ctgaattatt ttctatttta aaagaaccaa gaatcttatc
     7381 caactaaacc tattgacaac tgggccatca tttaacatat cttgaataaa taccaataaa
     7441 ggcactgcaa ttatattgat aaactaacta aattacatct ttcgataaat ctggagtata
     7501 atcctccttc atcatgatat ggtttttctt ttaccagtaa attgtttcaa atcatgaaat
     7561 aatttattat gaagtatata gtaatagaaa catatacaaa aaagacagcc taatcaaatg
     7621 tcatagcccc cccctctacc aaccaattgt actgataggc tatggcatta ctattaatca
     7681 attaaattat catcataaca aatatttaat agtaattgta caaaatcata ctattgattt
     7741 aaataataaa aaacgaatat tggtagttga tgatgaatta gatatttgta taatgttaaa
     7801 ggtagtttta gaaaataatg gattcatagt agaagattat tataatccta ttttagtact
     7861 caatgaattc aaatctcact tttacgattt aataatacta gatatacaaa tgccagatat
     7921 taatggactt caactatgta gagaaataag aaaaaaagat aaaaaagcaa aaatatgttt
     7981 tttgacagca agtgaaacaa tatttgatac ttcaaatgaa tttgctgggg tttatactct
     8041 tattaaaaaa ccaatagaaa ataataattt aattagaata gtcaatgggt tattgaataa
     8101 ctgatgatta aaacaactag tattgattct ttgataatat cattcatgaa taggaattgt
     8161 tatctcaata atataacata gagaaataca aattatttgt taatatcatg atttttcaat
     8221 aattttcatg ttattattta attttctata tatattatat cgtctatatt taatagtgtt
     8281 aaagtattat actaactcta ttattcattc taaattaggt tctaaaattg taatatttgt
     8341 ttttattata tttattctta ttattactaa ttttgttata gtttcctttt atcaatcaca
     8401 aatgccatat ctgggaaatt caataaatat tgcaggaaaa aatcggtttc ttacctctaa
     8461 tttaatgtta catgtatcag aatatttgaa tattgaaagt aacaataaaa atagctctga
     8521 aattaaatct gtaataaatc aattagaatc aaatattttg gtaggattat ctttatagaa
     8581 tagaatacta cttttaattg acggaatata ttcagaataa tacttttgat catcaatttc
     8641 taaatctgca aggtttttta ttatacacca tcttttttta tactttttat ttgcatcata
     8701 atgccctata gcataatatt cttttttagt taggagatct tttttagcac tttgttcata
     8761 tattgcaaaa tactcaaaga actgttcagc aaaaacagtt tttatatgtt taccatatct
     8821 atttataaat tcattatatt tctcaagact attaacaaca tcaataaatt cctgagattt
     8881 ttttgataag tttgttttag gtattgtgta gaaaa
//
LOCUS       DATIAS010000563         5318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1464052, whole genome shotgun sequence.
ACCESSION   DATIAS010000563 DATIAS010000000
VERSION     DATIAS010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5318
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1464052"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1110
                     /locus_tag="VLA74_11270"
     CDS             <1..1110
                     /locus_tag="VLA74_11270"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HSF51331.1"
                     /translation="LYKENKYEESLITARSAYLDSYEKIELPLRPIDPDFTLEMEIKF
                     AELRNLIEKRASYTEVMSKASEIQSGLDESERLVSGLGSIAPGIAFSSSFSIIFREGL
                     ESALIIGAITTYLEASRNERFKKHVYFGIFLAAGGTAITWFVMSFLVEISGASKELIE
                     AIAGISAVAVLFWVSFWILNKIETKKWIEFVKSKVWKATTTGSVMVFVMLSFFTVYRE
                     GFETVLFYQAMFSYAKHMEFFVTIGLIIGLIVIISIAYLVKKLGKKLPLRVLFGFTMG
                     VGAYMSITFFGNAIREFQEIGYISTTHLFEIIPRLDVNLATMTGIHPTLETILGQVIL
                     LSVYLVASMYILFIQPRKKKMIESSRKSMSDFRQK"
     gene            1180..1506
                     /locus_tag="VLA74_11275"
     CDS             1180..1506
                     /locus_tag="VLA74_11275"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF51332.1"
                     /translation="MSLISIKNSWDIDKKTVISFLNSILENDTYEIILLLMKKSKTVY
                     QIHDEINLPLSSIYKRIKKLENMGIVAIDKIHINSRGRKIIFYKSKLRSINFRLNEND
                     IDLVVN"
     gene            1696..4062
                     /locus_tag="VLA74_11280"
     CDS             1696..4062
                     /locus_tag="VLA74_11280"
                     /inference="COORDINATES: protein motif:HMM:NF014447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51333.1"
                     /translation="MRSHLHSLSLYYYDLTRIFFLIIFFSGILSTAWFGIPLAPHYFT
                     DHDITGLHILFTMLSFLSTIWGIMAYREFTKYVDNILLARDLCKKLDPTIGDYNYSTF
                     NPITKKYVKGFVHFGPTDFWDRETLVPDWLDKGKYWHIFLGLQTSGEEIILKVDNDSD
                     LLFFSEKKVVANTSRKYLKGEDEDFFKKKNQYIITIPQWLVMTTDVTHFTENELNINT
                     TDFGILINSINKQISLATNIITEHEKKRIKYPWVLSAITIYLFQSLPIKIVYKEIYGK
                     TLKYMPSHAKHIIGETNLNLSYVNLDELSESLLILARMKNIKPNNIEKIRYLILFLKN
                     MYEKQGLGEGSNRYHNFHHSLEVSYVSLQLLPKELHGHYFIWEDYELLLIAGLLHDYD
                     PYQQNYRTSIGLFRFDGPKVERTVSILSDMRIIDAYYSMDEIEFRNYFQQNQSQLLPP
                     IDYVTTHAEYVKSGKLIQTIIVEAMIWRTDYPFKQKLTSMKKYVYLLGLINDASKREK
                     YDLMSQILWLADLSVTYLGSDPIRAWERVTNLYNELFLPKFEAISKTDKFFSEFMDID
                     IFKELINNRNFPDIFRQRWNLVYQFYHEGNSSNQINRIIMNAKKSYSKINLEIGLKTG
                     DLLFRVSSEHPEEYFIGIDTDQESVISIKSRISVLKPQNATIFWGDAIKLLPNIYNNS
                     IDNIFFILSTPNKNRIDFDLEINKFHLIFHGVSTVLKPTGILKLIINLPQSDEFVIKI
                     GSIADQYGFQISHLEGHYAYFPKSYIRKEFFTDNTISVLLFKLKTEVV"
     gene            4139..5209
                     /locus_tag="VLA74_11285"
     CDS             4139..5209
                     /locus_tag="VLA74_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HSF51334.1"
                     /translation="MAEKIKVAIAGVGNCASALIQGIHYYKSMKEKDPTGLTAYNLAG
                     YTPEDIEFVAAFDVSDSKVGLDVSEAIFSEPNNAMKIISLDRLDVKVNKGEVLDGVGK
                     HLAEKIRISDIPVADVSNILKDTNTDILLNYLPVGSREATKFYAQKCLDSGVSFINAI
                     PVFIASEPHWQTAFKDNNVLCAGDDIMSQVGATVVHKTLVKLFIDRGVKVDDTYQLNI
                     GGDMDFYNMLDDERLEDKRISKTSAVEAMSPYTIPMRIGPSDYVSSLKNDKICYINIR
                     GKKFGNIPIELDLKLRVADAYNSAGIMIDAIRATKIGIDRGLSGSLESVSAYCFKHPP
                     IQMSYTKAKENFQEFVKGRKDI"
BASE COUNT         1874 a          745 c          909 g         1790 t
ORIGIN      
        1 ctctataagg aaaataaata tgaagaatct ctgataactg ctcgctctgc atatttagat
       61 agttatgaaa agatagagct gccactgaga ccaattgatc ctgatttcac gctagaaatg
      121 gaaattaaat ttgcagagct tagaaatttg atagaaaaac gtgcttcata tacagaagtc
      181 atgagtaaag caagcgaaat tcaatccggt ttagatgagt cagaaagact cgtatcagga
      241 ttaggctcaa tagcaccggg aatagctttt tcgtcttcat tttctataat ctttagagaa
      301 ggattagaat ctgctttgat cattggcgca ataacaacgt atctagaagc ttcaagaaac
      361 gaaagattca aaaaacatgt ttattttgga atatttcttg cagctggtgg tacggctatt
      421 acttggtttg ttatgtcatt tcttgtagaa atatccggag caagtaaaga actcatagag
      481 gcaatagcag gaatatctgc agttgcagta cttttctggg tcagtttttg gattttgaat
      541 aaaattgaaa cgaaaaaatg gattgaattc gttaaatcaa aagtttggaa agctactaca
      601 accggaagtg tgatggtctt tgtaatgctt tcttttttta cagtatatag agaaggtttt
      661 gaaactgttc tgttttatca agccatgttt tcttatgcaa aacatatgga attctttgtt
      721 acaattggtt tgattattgg actcattgta ataatctcga tcgcatacct agtcaaaaag
      781 ttgggtaaga aattgccatt aagggttctt tttggattta caatgggagt tggtgcttat
      841 atgtccatta ctttttttgg taatgccatt cgtgaatttc aagagattgg atatatctct
      901 actacccatt tatttgaaat aattcctaga ttggatgtca atctcgcaac aatgaccgga
      961 attcatccta ctttggagac tattttagga caagttattt tattatctgt atatcttgtt
     1021 gcctctatgt atattctatt tattcaacca aggaaaaaga aaatgataga atcatcacgt
     1081 aaatcaatgt cagatttccg gcaaaaataa ctctttttat tatttgttta aattaacatt
     1141 tatatattag ttgaacctaa ttagtttggc ctaatacagt tgagtctgat atctataaaa
     1201 aatagttggg atattgataa aaagacagtt atctcttttt taaatagtat cctcgaaaat
     1261 gatacatacg agattatttt gttattgatg aaaaaatcaa aaaccgttta ccaaatacat
     1321 gatgaaataa atttaccttt aagttctatt tataaacgaa taaagaaatt ggaaaacatg
     1381 ggtatagttg caattgataa aattcatatt aattcaagag gtagaaagat tattttttac
     1441 aaaagcaaac taagatcaat aaattttaga ctaaatgaaa atgatatcga tctggtagtt
     1501 aattaatgtt atcaatttct gattctctct tattgttgtg gtaattgcgt cattactact
     1561 tttgtttata tcatctaaaa ctcatctaaa aattctatat gtattaatat taaaaaatac
     1621 gatagatatt gactgaacaa tatattggag ctgatcagag gcgtattaag aacaatcagg
     1681 attcaaaatt atttaatgag atcccatcta cactcactta gtttatatta ttatgatcta
     1741 accagaattt tcttcttaat aatattcttt tctggaattt tatcaacagc atggtttggt
     1801 attccattag ctcctcatta ttttactgat cacgacatta ctggccttca tattctattt
     1861 acaatgttga gttttctaag tactatatgg ggaataatgg cttacagaga atttaccaaa
     1921 tatgtagaca atatcctgtt agcaagagat ttatgcaaaa aattagatcc aacaatagga
     1981 gactataatt attcaacatt taatccgata acaaaaaaat atgtaaaagg ttttgtgcat
     2041 tttggtccta cggatttctg ggatcgtgaa acattagtgc cagattggtt agataaagga
     2101 aaatattggc atatttttct gggtcttcaa acaagtggtg aagaaattat tcttaaggtt
     2161 gataatgatt cagatcttct ttttttttca gagaaaaagg tagtggctaa tacttcgcgc
     2221 aaatatttga aaggtgaaga tgaagatttt tttaaaaaaa aaaatcaata tatcatcact
     2281 attcctcaat ggttagtaat gactacagat gttacacatt ttacagaaaa tgaattgaat
     2341 atcaacacta ctgattttgg tatattaatt aattctatca ataaacaaat atctctcgca
     2401 acaaatatta ttacagaaca tgaaaaaaaa agaatcaaat atccatgggt attaagtgcg
     2461 attactattt atctttttca gagtttgcct attaagatcg tgtataaaga aatatatgga
     2521 aaaactctca aatacatgcc ttcacacgct aaacatatta ttggtgaaac caatctaaat
     2581 ctttcttatg ttaatcttga tgaactaagc gagtcattac tcatattagc aagaatgaaa
     2641 aatattaaac caaacaatat agaaaaaatt cggtatctta ttttattcct aaaaaatatg
     2701 tacgagaaac aaggtttggg cgagggctca aatcgttacc ataatttcca tcatagttta
     2761 gaggtttctt atgtgagttt acaattatta ccgaaagagt tgcacgggca ttattttatt
     2821 tgggaagatt atgaattatt attgattgct ggtttactgc acgattatga tccatatcaa
     2881 caaaattata ggactagtat aggattattt agatttgatg gacctaaggt tgaaagaaca
     2941 gtatcaattc tgagtgatat gagaattatt gatgcatact atagcatgga tgaaatagaa
     3001 ttcaggaatt attttcagca aaatcaaagc caacttcttc ctccaataga ttatgtaacc
     3061 actcatgcag aatatgtaaa atccggtaaa ctgattcaga ccatcatagt ggaagctatg
     3121 atttggagaa cagattatcc tttcaaacag aagcttacat ctatgaaaaa gtacgtctat
     3181 ctcttaggat tgataaatga tgcaagtaag agagaaaaat atgatcttat gtcacaaatt
     3241 ctgtggctgg ctgatttgtc agtgacgtat ttgggttcag atcctattcg tgcttgggaa
     3301 cgggtaacca atctgtacaa cgaattattt ctcccaaaat ttgaagctat ctctaaaaca
     3361 gacaaattct tttcagaatt tatggatata gatattttca aggaattaat aaacaataga
     3421 aattttcctg atatatttag acaaagatgg aacttagtat atcagtttta tcatgaaggt
     3481 aactcgtcaa atcaaatcaa cagaataatt atgaatgcca aaaaatctta ttccaaaata
     3541 aatttagaaa taggcttaaa aactggagac cttttgtttc gtgtatcttc agaacatcct
     3601 gaagaatact tcattggaat agatacagac caagaatcgg taataagtat aaaaagtaga
     3661 atttcggtcc taaagccaca aaatgcaaca attttttggg gtgatgcaat aaaattatta
     3721 cctaatattt ataataattc aatagacaat atttttttta ttttgtctac acccaacaag
     3781 aatcgaattg attttgattt agaaatcaat aaatttcact tgattttcca tggtgtgtcg
     3841 actgtattaa aacctactgg aatattgaaa ctaataatca atttacctca atcagatgaa
     3901 tttgttatta agatagggtc aatcgcagat caatatggat tccagataag tcatttagaa
     3961 ggacattatg cttattttcc gaaatcatat attcgcaaag aattttttac agataacact
     4021 atttcggtac ttttattcaa gctgaaaacg gaggttgtct aatatctggt ttcactttct
     4081 ttttttggaa ttcttaaaaa aatataaatg aatgattaat tcaggttaat aaaaaggaat
     4141 ggcagaaaaa attaaggttg caattgctgg agttggaaat tgtgcttcag cccttatcca
     4201 ggggattcat tattacaaat caatgaaaga aaaggatcct actggtttaa ccgcatataa
     4261 tttggcaggt tatactcctg aagatattga gtttgtagca gcttttgatg tatctgactc
     4321 caaggtcgga ttggatgtat ctgaagctat tttttctgaa cctaataatg ccatgaaaat
     4381 aatttccctg gatagattgg atgtaaaggt caataagggc gaagtattgg atggagtagg
     4441 aaaacatctt gcggagaaga ttcgtatttc cgatattcct gttgcagacg tttctaatat
     4501 cttgaaggat acaaatactg atatacttct gaattatctg cctgtaggca gtagggaagc
     4561 aacaaagttt tatgcacaaa aatgtttgga ttcaggagtc tcattcatca atgcaatacc
     4621 agtttttata gcatcagaac ctcattggca aactgcattc aaagataata acgttctgtg
     4681 tgctggtgat gatataatga gtcaagtagg tgcaacagtt gttcataaaa ccttagtcaa
     4741 gctttttatt gatagaggtg tcaaggtaga cgatacttat caactgaata taggtggtga
     4801 tatggatttt tacaacatgc ttgatgatga acggttagag gataaacgaa ttagtaaaac
     4861 aagtgctgta gaagcaatgt ctccatatac tattccaatg aggataggtc cttcggacta
     4921 tgtcagttct ttaaaaaatg ataaaatatg ttatatcaat atccgcggta aaaaattcgg
     4981 aaatattcct attgaattag acttgaaatt aagagtagca gatgcctata atagtgcagg
     5041 tataatgata gatgcaataa gagctactaa aattggcatt gacagaggat tatctggttc
     5101 acttgaaagt gtttcggcat attgttttaa acatccacca attcaaatgt catatacaaa
     5161 agcaaaagaa aactttcaag agtttgttaa aggaagaaaa gatatctaat atagtggtat
     5221 ttaccgtaga ctaattcaat tatggatttg acaaactcca aactcaagat cttcatcatt
     5281 tttatttatc agtagggcta gtttagtcat cgtttgcc
//
LOCUS       DATIAS010000564         2533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_919611, whole genome shotgun sequence.
ACCESSION   DATIAS010000564 DATIAS010000000
VERSION     DATIAS010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919611"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1240
                     /locus_tag="VLA74_11290"
     CDS             <1..1240
                     /locus_tag="VLA74_11290"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HSF51335.1"
                     /translation="DIQSFLVYLREKRKLSYRSASQYLNSIKKFYYVNSDYEFKWSLI
                     KMYLGNDDDDVEVEDRPYTREEIQIMLKTANDIRVKIIILLMVSSGMRHGALPLLKLK
                     NLTKIEKYGLYQITVYQKSRKYNYKTFCTSECANLIDSYLNYRKHAGENLKDSSPLLR
                     EQFNSEDSFKVNNPKPIGVSLIRYLVNEVLIKYSALRQKIPYNYQNKRREQKSPTMLT
                     HAFRKFFNTECAKAGVYPDFIELMMGHKLPGVRSHYLIPDINTLLEGTKEVKGYLAAI
                     NDLTINDEFRLVTKIKKLEEQDDYQKYIINKKIKEKDEEIAKMRQAMRTVLDTVDIMK
                     NDFIAKQNEKVEKDKEIKDHFKKIESRLFETQIFAQKLDEVDQKRQEIFAKKGFITKE
                     DEEEIKNFVVGDLKQNDPDL"
     gene            1522..1752
                     /locus_tag="VLA74_11295"
     CDS             1522..1752
                     /locus_tag="VLA74_11295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51336.1"
                     /translation="MSDLYIRIFVFIDSNFLCNPNIRDLNKSIEFNNIMEIVTTISIS
                     LPRTIVEEIDNHRGDINRSKCILRLIESKFHE"
     gene            1921..2106
                     /locus_tag="VLA74_11300"
     CDS             1921..2106
                     /locus_tag="VLA74_11300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51337.1"
                     /translation="MIKVKKIPDPNINNQSNYINTSNTTARDELKVIQRSIALLRLPK
                     IIHDELIKIHHYHYKQQ"
     gene            2131..>2533
                     /locus_tag="VLA74_11305"
     CDS             2131..>2533
                     /locus_tag="VLA74_11305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51338.1"
                     /translation="MYIQFDVISDPIKFVLDTALKEARKEERLTNQLLITMLSAYSNN
                     PLNLLINAPSGVGKNYVINTVASLFPQSDILSLAGMTEKALFHRSGILVIKNEYSGEY
                     EPIETKIDEIENELNDLENELTQTKDKNQKQE"
BASE COUNT         1029 a          325 c          406 g          773 t
ORIGIN      
        1 agatatccaa tcattcttgg tatatttgag agagaagcga aaattgtctt atagatctgc
       61 atcccagtat cttaattcaa taaagaaatt ttattatgtt aattcagact atgagttcaa
      121 atggtcactt atcaaaatgt atcttggtaa tgacgacgat gatgtagaag tagaagatag
      181 accatatact agagaagaga ttcaaataat gttgaaaact gccaatgata ttcgtgtcaa
      241 aattatcatt ttgttgatgg tatcatctgg aatgcgacat ggagcacttc cattactcaa
      301 actcaagaat ttaacaaaga ttgaaaaata tggtttgtat caaataactg tatatcaaaa
      361 atcacgtaaa tataactata aaactttttg tacttctgaa tgtgcaaatc ttattgattc
      421 atatctcaat tacagaaaac atgcaggaga gaacctgaaa gattcaagtc cattgttaag
      481 agagcagttt aattcagaag attcattcaa agttaataat cctaaaccta taggagtgag
      541 tttaataaga tatttggtaa acgaagtatt aataaaatat tctgcactta gacaaaaaat
      601 tccttataac taccagaata aaagaagaga gcaaaaaagt ccaacaatgc taactcatgc
      661 tttccgcaag ttctttaata ctgaatgtgc taaagcagga gtttatccag attttattga
      721 attaatgatg ggtcataagt taccaggtgt ccgtagtcat tacctaatac cagatattaa
      781 cacattattg gaaggtacaa aagaggttaa aggatatttg gcagcaataa atgatttgac
      841 aatcaatgac gagtttagac ttgtaacaaa gataaaaaaa ttagaagaac aagacgacta
      901 tcaaaaatat attataaata aaaaaattaa ggaaaaggat gaagagattg ctaagatgag
      961 acaagcaatg agaacagtat tagatacagt agacataatg aaaaatgact ttattgctaa
     1021 acaaaatgag aaagtggaaa aagacaaaga gattaaggat cattttaaaa aaatagaatc
     1081 tcgtctattt gagacacaga tattcgctca aaaattggat gaagtcgatc aaaaaagaca
     1141 agagatattt gctaaaaaag gatttataac aaaagaggat gaagaagaaa ttaaaaattt
     1201 cgttgtagga gatctaaaac agaatgatcc agatctgtga cagattttat ttaatcaaca
     1261 gcagtagcaa taataagaaa aagtaaattt gctaaagatc tgattgataa tattttttta
     1321 tgtctgtttt agttaggtaa tatttcctta attgtaattt ctctgttatt cttgttttct
     1381 agtaagaata aaaaaattga aaagatctaa tagataaaag aagttataaa gaattttcaa
     1441 aataacttaa ggttatgttt ttttactctt ttcttcttaa gaattgagga tagactagat
     1501 taagcaaagg atagactaaa tatgagtgat ctttatatca gaatattcgt ttttattgat
     1561 tcgaatttcc tttgtaatcc taatattcgt gacttaaata aatctattga atttaacaac
     1621 attatggaga ttgttactac aataagcata tccctgccaa gaacaattgt cgaagaaatt
     1681 gataatcata gaggagatat taatcgttct aaatgtattt tacggttaat agaatcaaaa
     1741 tttcatgagt aaggagaatc tacaatgatt caaacacaaa ctcttccacc ctttttagtg
     1801 tatagttgtc cattaggatg caatttatta tgtcctaaac gatggaaatg cagatctgta
     1861 gatcaagata ttgtatgtct ttgtcaatgc cacaaaaaca acgaggattt gaaataaaaa
     1921 atgataaaag taaaaaaaat acccgaccct aatattaata accaaagtaa ttatataaat
     1981 acttccaata ctactgcaag agacgaacta aaagtaatac aaagatctat cgcacttttg
     2041 agactaccaa agatcattca tgatgaattg atcaaaattc atcattacca ttacaaacaa
     2101 cagtaagaaa gaaggggata atgtattaat atgtatatac aatttgatgt tatttctgat
     2161 ccaattaaat ttgtattgga tactgcttta aaggaagcaa gaaaagagga aagattaaca
     2221 aatcaactct taattacaat gttatcggca tatagtaaca atcccttaaa tttattaatc
     2281 aatgcaccaa gtggggtagg caagaactat gtaatcaaca ctgttgcatc tttgtttcct
     2341 cagtctgata tcctttcttt ggctggaatg acagaaaaag cattattcca tcgctctggt
     2401 attttagtaa ttaaaaatga atatagtggt gaatatgagc ctatagagac aaaaatagat
     2461 gagattgaaa atgagttaaa tgatctcgaa aatgagttaa cacaaactaa agataaaaat
     2521 caaaaacaag aat
//
LOCUS       DATIAS010000565         4421 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_646792, whole genome shotgun sequence.
ACCESSION   DATIAS010000565 DATIAS010000000
VERSION     DATIAS010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4421
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_646792"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..1327
                     /locus_tag="VLA74_11310"
     CDS             263..1327
                     /locus_tag="VLA74_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSF51339.1"
                     /translation="MKAAVYHEHNKDPRKVVKIEEIEVPKIKHNQILIKVEAASYNYN
                     DLWGIWGEPIKIPLPHISGSDVSGTVVDVGENVLSIKKGDRIVGYPNLTCRICKDCTS
                     GKEYDCRQRQVWGFQTGPLWGGFAQYTYLPEVNVIKIPNNVSFEDAAAISMVGMTAWH
                     MLVTRANIQPGQSVLIMGGGSGMGIAGIQIAKLFNCDVIATAGTQEKMDKCLELGADH
                     VVNHREAEWYKKVRNLTVNNKQGEEGVDIIFEHIGKSVFAQEVSLLNMGGTLVSTGAT
                     TGYDSKLDLRYLFFRGLNLLGATQGTRAGLEEVIKWTSKGKIKAIIDTIYPFENMVNG
                     HIKMMESQLFGKLVTTPQKL"
     gene            1393..1848
                     /locus_tag="VLA74_11315"
     CDS             1393..1848
                     /locus_tag="VLA74_11315"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSF51340.1"
                     /translation="MFHMLLENKTNEQIANELKISIRTVQNYKRRLEQRYGTIWRQKT
                     NDTLFLECTLFKNRMLRLYKALEDQVTSDETSGTDKAKCAEVAANIAIDILKMESEGI
                     KAVKQLVSKNVQGKNILDNRNNNRQSKNRYDYDESNNIQPENDDPNRKF"
     gene            complement(2125..2352)
                     /locus_tag="VLA74_11320"
     CDS             complement(2125..2352)
                     /locus_tag="VLA74_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51341.1"
                     /translation="MEFMSNIQDEFFLYHYKKFGLETEIRNVIYSLSSIGIELEKFGL
                     SIPKLVNIDKDVFNLERQIKSIIKLKDQHNG"
     gene            complement(2631..2864)
                     /locus_tag="VLA74_11325"
     CDS             complement(2631..2864)
                     /locus_tag="VLA74_11325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51342.1"
                     /translation="MSNLSYYEEIDNFIKNSNDEKEENTSFLNEKKTKLDQLISFFNE
                     KNFKLSSGDIKRTIFLIDDVIESSDQLMLIIIT"
     gene            complement(3436..>4421)
                     /locus_tag="VLA74_11330"
     CDS             complement(3436..>4421)
                     /locus_tag="VLA74_11330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51343.1"
                     /translation="HIVTNMDTKFVKLTKNNYIYAVQVDFQNDMNATYKYKGIKLYAF
                     IDGSSHLISFNGLESDYYEYLPLIHQVLNSFEFKNYKKDQFVTYENPYAKIKFQYPAN
                     WHIDTYSTNLPRFTFPEDVSFPEDELPVLEKDRNKEEKEAINSLSYGMYIDVASTFDS
                     GADYVIEVNREPEQYNWSKLVKELSPENKMKTNEESNFTKFIDKNNKDHISFSVELEK
                     INSPKDFSIMFYAVEYGDNDCHFIDVTNFLPIPLPDVEMKVDPNKPITITRGKEAIVE
                     LHIKSDSSINSHVLVSSSKNEENKDIKTNILPNSTIIPPKDTAISILKIKL"
BASE COUNT         1601 a          557 c          667 g         1596 t
ORIGIN      
        1 accttggtag tatataatgt aaagtaaaag tgattacttt ggattggtta cttctgaatg
       61 aagttgttca tagataataa aacaaagtaa ttagtgttgg tttacacaaa taacttacta
      121 atgtctttac aaaactatta atctataaac cttatttttt gataattaaa taaatattac
      181 taccaattag atttaaaaaa tattttttac catgttttgt aaacctatta tttaaatttc
      241 ctattacatt ttttataatg atatgaaggc agctgtatat catgagcata ataaagatcc
      301 acgaaaagtt gtaaaaatag aagagataga agttcctaaa attaagcata atcaaattct
      361 tataaaagtt gaagcagcat cttataatta caatgatctt tggggaatat ggggagaacc
      421 aattaagatt ccacttcccc atatttctgg aagtgacgtt tcaggaacag tagtagatgt
      481 tggagaaaac gttctaagca taaaaaaagg agacagaata gtaggatatc ccaatctaac
      541 ctgtagaata tgtaaagatt gtacttctgg caaagaatat gattgtcgtc aaagacaagt
      601 atggggtttt caaacaggtc cattatgggg aggatttgct caatatacgt atttaccaga
      661 agttaatgtt ataaaaattc caaataatgt ttcatttgaa gatgcagcag ctatttctat
      721 ggttggaatg acagcttggc acatgttagt tactagagct aacattcaac caggtcaaag
      781 tgtattgatc atgggaggtg gaagtggtat gggaatagca ggcatccaaa ttgcaaagtt
      841 gtttaattgt gatgttattg caacagctgg cacacaagaa aaaatggata aatgtcttga
      901 attaggtgct gatcatgttg taaatcatag agaggcagaa tggtataaaa aagttagaaa
      961 tttaacagta aataataagc aaggagaaga aggtgtagat attatttttg aacatatagg
     1021 aaaatctgta tttgcacaag aagttagtct cttaaatatg ggaggcacat tagtatctac
     1081 tggagccaca actggatatg attcaaaatt agatttaaga tatcttttct ttagagggct
     1141 aaatcttctc ggagctactc aaggaactcg tgcaggatta gaggaagtaa tcaaatggac
     1201 aagtaaagga aaaataaaag caataataga tacgatttat ccatttgaaa atatggtaaa
     1261 tggtcacata aaaatgatgg aatcacaatt atttgggaag ttagttacca cgccacaaaa
     1321 attataataa aatctatttg aaatttttta ttagataacg gtctaacaat acaattgatg
     1381 caatgaaaac aaatgttcca tatgctattg gagaacaaaa caaatgagca gatagcaaat
     1441 gaattgaaaa taagtattag aacagtacaa aattataaac gacgactcga acaacgatat
     1501 ggaaccatat ggagacaaaa gacaaatgat actctctttt tagaatgtac cttgtttaaa
     1561 aatagaatgc taagacttta caaagcatta gaagatcaag ttacttctga cgaaacttct
     1621 ggaactgata aagccaagtg tgcagaagta gcagcaaata ttgcaataga tattttgaaa
     1681 atggaaagtg aaggtataaa agcagtaaaa cagttagtat caaaaaatgt acaaggaaaa
     1741 aatattctag acaatcgtaa taataatcgt caatctaaaa atagatatga ttatgatgaa
     1801 tctaataata ttcaaccaga aaacgatgat ccaaatagga aattttagtt taattaataa
     1861 ttcttcttaa caaatgaatc tacacgatta cgagattcgt gaatatcgtt tagattgttt
     1921 tattttctca tgttttgatt ctttgaggat caatacactc aatagtatgc attgcgatta
     1981 tgaggaaagt cattccctaa actgccaata atgaattatc tatttttatt aataaatcaa
     2041 aattccttta tctaactgtt ttaaatttta ttaatcaaca tagtatgata attttaatct
     2101 attgaagttg taaataatac gattttaacc gttgtgttga tcttttaatt tgattatact
     2161 tttaatttgt ctttctaaat taaagacatc tttatctata ttgactaact ttgggatgga
     2221 taatccaaat ttttctagtt ctatacctat agaagacaaa gaataaataa catttcgtat
     2281 ttcagtttct aatccaaatt tcttatagtg ataaagaaag aattcatctt gaatattaga
     2341 cataaattcc aattgtttag atccttttaa ttgctcaaac aatattttca atatattatg
     2401 ggaatcaaag gaatagataa tataagatat taatttaatt aatttatttt gaatttcaat
     2461 aaatgaatta aagataatat tatttatttt taataacatt tctttagaaa tagatcttga
     2521 ccaaattatt gaacggaaga aaaaaagatc acagatataa taaaatatga acaatatatc
     2581 tcctaatata ataaaggtat cacaagcaga taacattttt tcataggaat ttatgttatt
     2641 atgataagca ttaattgatc cgatgattct ataacgtcat caattagaaa tattgttctt
     2701 tttatatcac ctgagctgag tttaaaattc ttttcattga aaaaacttat taattgatct
     2761 aattttgtct ttttctcgtt aaggaaagaa gtattctctt ctttttcatc attagaattt
     2821 tttataaaat tgtctatttc ttcatagtaa gataaattgg acaatatatt ataatatcta
     2881 taactttata ttatttatga ttctttcttt aaatatctat aattatattc attttattaa
     2941 atattattaa aaaattggtt atctaaactt ttacaatata ttttacctat gatgtataac
     3001 taaagtgtct ttatacgtaa agagattttt gttatcattt ttacattaga ttgtttaaaa
     3061 agaaacctat cttataggtt attccgatga ggctgctcca gattctattt caattattaa
     3121 atataccatt ttaattttga tctttttcct tcttcccttt ccatattttc catcctaaaa
     3181 ttcctgttcc aattgttgtg atagtagtcc aggctcctgt tagaggatta aagtaatcat
     3241 ttaaccagtt ttttagaatt tctgaggtag aggggggatt gtcaacaatt aatgtaatgt
     3301 ttgatttttt tgttatattt ataggggatg gatttgtaaa gtttatcgtt tcgccaccaa
     3361 attgaatgag atatgtttct ggtaatgata gttttgcaat tatcggtatt gtatacgacc
     3421 gtgctagagc cgtatctaaa gtttaatttt caatattgag atcgcagtat cttttggagg
     3481 aattatagta gaatttggga gaatattagt ttttatatct ttattctctt catttttaga
     3541 agaagaaact aaaacgtgag aatttattga ggaatcactt tttatatgta attccactat
     3601 tgcttctttg ccccgagtta tagttatagg cttgttagga tcgactttca tttccacgtc
     3661 tggcaaaggt attggaagaa agtttgttac atctataaaa tgacaatcgt tatctccata
     3721 ttctaccgca taaaacatta tactaaaatc cttaggagaa ttaatttttt caagttcgac
     3781 tgaaaagcta atatgatctt tgttattctt atctataaat tttgtaaaat tagactcttc
     3841 attagttttc attttatttt caggagataa ttctttaact aatttactcc aattatattg
     3901 ttctggctct ctatttactt caataacata atctgcaccg ctatcaaatg tcgaagcaac
     3961 atcaatatac attccataag ataagctatt gatagcttcc ttttcttcct tatttcgatc
     4021 tttttctaaa acaggtaatt cgtcttctgg aaaagaaacg tcttctggaa aagtaaatct
     4081 aggtaaatta gtcgaatatg tgtctatatg ccaattggct ggatattgga atttgatttt
     4141 tgcatatgga ttttcatagg tgacaaattg atctttttta taatttttaa attcaaaaga
     4201 attcaatact tggtgtataa gtggtagata ttcataataa tcagattcca atccattaaa
     4261 tgatattaag tgagaactac catcaatgaa agcatataac ttaatacctt tatatttgta
     4321 tgttgcattc atatcattct gaaagtcaac ttgaaccgca tagatatagt tatttttagt
     4381 taatttaaca aattttgtat ccatatttgt aacaatatgg t
//
LOCUS       DATIAS010000566         8759 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_510710, whole genome shotgun sequence.
ACCESSION   DATIAS010000566 DATIAS010000000
VERSION     DATIAS010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8759
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510710"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..579
                     /locus_tag="VLA74_11335"
     CDS             43..579
                     /locus_tag="VLA74_11335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HSF51344.1"
                     /translation="MPIDPEFPNNYQVIGKIKLGDGEQFHFRWGPGKQAEAAENEEVK
                     AAYTARGEEQVPLGVSGTMVAVDWDSCVADGACIEACPVQVFQWYRTEHDVPAKDAHE
                     QPWEGTGSSVKEERKDYTDKADPIREHDCIWCMACVSVCPPQAIKVDQSSLEFHEKAS
                     GTFNESLSKGSAPPPHAH"
     gene            748..1350
                     /locus_tag="VLA74_11340"
     CDS             748..1350
                     /locus_tag="VLA74_11340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51345.1"
                     /translation="MLVLVVVTDSYMGIFLPSDLNTRLSDFINKKREFPFIEKDEIIG
                     TYYLFGKNQKIRESLDILSVHSIAKKTMERTLSNIKIFKSFQHTKINSDFIREGYIKR
                     ILQISIENKEFNYQKMDMRILRDPTILSSCFEQHIVYYKQDYFFHLIKQPLEKSVIPS
                     NLVDKLEGRMLMVGYNVSDDQKLPYANILEPFFEWLQKID"
     gene            1622..2053
                     /locus_tag="VLA74_11345"
     CDS             1622..2053
                     /locus_tag="VLA74_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 subunit beta"
                     /protein_id="HSF51346.1"
                     /translation="MGIQTKANYELLLDRLYDKLGTTSKKEISRLELPQPQIIWVGQR
                     TIFRNFMEFPKALRREPEKILLYLNKELASAGYIIGDRVIFLGRKERSSFGALIDRYV
                     KDYVICPVCSSHDTRTEKNKKLGFLLCEACGAKSSIKGNYA"
     gene            complement(2192..2614)
                     /gene="trxA"
                     /locus_tag="VLA74_11350"
     CDS             complement(2192..2614)
                     /gene="trxA"
                     /locus_tag="VLA74_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSF51347.1"
                     /translation="MISSSDDEIAAIMKKKMNELQKRAEITAKLKKITEPIPLNDSNF
                     DLEKNKFPLMLVDFWATWCGPCKIISPIIEQLAKEYSGKIVFAKINVDENHQISNRFG
                     IQSIPTMIVFKYGEVVDRIIGALPKVQIENKLKIYLEE"
     gene            2731..3330
                     /locus_tag="VLA74_11355"
     CDS             2731..3330
                     /locus_tag="VLA74_11355"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HSF51348.1"
                     /translation="MVNNNQNIIEPQEPQEPQEPQIEVDYYESLNKELNKTKIELEKT
                     KEESEITLNKLKYLMADFDNYRKQIEKQMNSTIETNKANILAKFLNILDDYERALDVI
                     KKNQDIDPVLIDGLDGIIKNFYSALLSEGVIKIETIGTLFDPNKHHIVSFSYTDNKDE
                     NIITEEIRTGYMMNDKVLRPSLVIISKKKYNQQEVGNSN"
     gene            3348..5255
                     /gene="dnaK"
                     /locus_tag="VLA74_11360"
     CDS             3348..5255
                     /gene="dnaK"
                     /locus_tag="VLA74_11360"
                     /inference="COORDINATES: protein motif:HMM:NF001413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HSF51349.1"
                     /translation="MGKVIGIDLGTSNSAAAAMIGGKPTIIQAAEGASIGGKAFPSVV
                     AFTNTGDLLVGEPARRQMVSNPEGTVMAAKRKMGTDLRFNVGGKNYSPQQISSFILQK
                     IKKDSEAFLGDVVDKAVITVPAYFNDNQRQATKDAGEIAGLQVVRIINEPTAASLAYG
                     LDKIQKDLKIMVFDFGGGTLDVTIMEMGGGVFQVKSTSGDTQLGGTDMDNAIVEYILQ
                     EFKQQSGLDVRNDKAAMMRIREAAEKAKIELSNLVSTEINLPFLSYDQSTGPKNLIIN
                     LTRSKIEELLRPIVEKCKGPMMQAIQDAKHVPSDIEKIIMIGGPTRMPIVRQFVETVM
                     GKEPERGVDPMEAVAMGAAIQGAIISGDVSTDILLVDVTPLTLGLEVLGGIKETLIER
                     NTTIPTKKSKVFTTAADYQSAVTIHVVQGERPMAADCVSLGTFNLAGIPPAPRGVPQI
                     EVTFDIDANGILNVTAKDLGTSKEAKITITASTKLSKEEIDRLKKESDQYTEADKKKR
                     EEAELRNEADNIVYSAEKLINQDFKDKIKPEQTEKINKSIHDLKDALSSNNLEDIKNK
                     IQNTKTLLAEVSTEIYKNIGASTGGGPTGGGPTGGGTTSDTTQENSTGQGTNQQSNTD
                     NSNEKTSSAGS"
     gene            5329..6450
                     /gene="dnaJ"
                     /locus_tag="VLA74_11365"
     CDS             5329..6450
                     /gene="dnaJ"
                     /locus_tag="VLA74_11365"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HSF51350.1"
                     /translation="MTSKKDYYEVLGVQKTATKDEIKNSYRKLALKFHPDRNKSSEAE
                     EKFKEISEAYAVLSDDDKRKRYDTYGHVGTDEAFRGSEANFEEIFKDMGFGGFAKTIF
                     EQMFGDRGGFSSGDPFAGFSFNIGGSERSRGRDILYDVELSLEDVLKGRKDEIEVPKF
                     DKCSDCNGTGASKGSKPKVCSVCNGRGQTRRVYNQNRFSTFISLETCQSCNGKGEVIE
                     NPCNMCRGSGKIKVKKKLKISIPSGVEDGMTLQLSGEGEYSDVGSPGDLLIRVHVLPH
                     QLFERLDEGHILHDLTLDYTSLVLGTEVKIPTLQGNEKLKIPPGTSVDTILRLKGKGL
                     PRYGSYGKGDQLVRVHVRIPNILTDKQKWLLKELDKEFQ"
     gene            6489..7079
                     /gene="hsp20"
                     /locus_tag="VLA74_11370"
     CDS             6489..7079
                     /gene="hsp20"
                     /locus_tag="VLA74_11370"
                     /inference="COORDINATES: protein motif:HMM:NF041800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal heat shock protein Hsp20"
                     /protein_id="HSF51351.1"
                     /translation="MTYPFDEWFRKRRLGSWFPDIDTMMREMEKMMGEAFQHFEQPVP
                     KKFIKERKLDDGSTIKEYGPVVYGYSVKIGEDGKPIIRKFGNIDAFSHILTSDSTEIQ
                     DEREPLIDVIMGKEEIKVVAEMPGVEKEDLRLNANENTLTISCSTSSKQRYHKKIDFP
                     EPVEPTTGRSQYRNGVLEITFKKKNIISSGVQINIE"
     gene            7277..7576
                     /locus_tag="VLA74_11375"
     CDS             7277..7576
                     /locus_tag="VLA74_11375"
                     /inference="COORDINATES: protein motif:HMM:NF015069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET family transporter"
                     /protein_id="HSF51352.1"
                     /translation="MIEFTISSQSTLLAFLIGLSATILTRYSSIPQIIKGLKTRKMDD
                     VSFWLIFYLTVGLFLYVIYGVIIDDLIIIWGNVVGVITNLVLISLKIKYSAKQFG"
     gene            7718..8227
                     /locus_tag="VLA74_11380"
     CDS             7718..8227
                     /locus_tag="VLA74_11380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51353.1"
                     /translation="MSSKKRIKIELEDSEGDKYNLSLEGNFSKEKIVHIMELMDMVQS
                     GRKPTNNITSFITDNDKEILSVDSKIWNVIEQSFSRISFTSSDIAQLYEERYKEPIKL
                     SVISTYLSRYCTKGKLLRTKRLREYVYSLPISSKDLSSNNSQNCFSSTTHYNNLYNID
                     NKTIHDLKN"
     gene            complement(8375..>8759)
                     /locus_tag="VLA74_11385"
     CDS             complement(8375..>8759)
                     /locus_tag="VLA74_11385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSF51354.1"
                     /translation="SFFGNKKREISITETGIRLLNAKKEELEQKWRKAQQIYNNGQGN
                     KAQLQTFMEANRSWMPLMLFMGITDILFFMTMMSFVGMALTPMEHSMAGDSGTEAAGG
                     ETSSEMDSGDTGDFGGFDGGGFGDF"
BASE COUNT         3242 a         1232 c         1536 g         2749 t
ORIGIN      
        1 atgatttata taatatactc tcatggataa attcagatat aaatgccaat agatccagaa
       61 tttccaaaca attatcaagt aattggtaag atcaaattag gtgatggtga acaattccac
      121 ttcagatggg gaccaggtaa acaggcagaa gcagcagaaa atgaagaagt aaaggcagcg
      181 tatactgcac gtggagagga acaagttcca ttgggtgtaa gtggtacaat ggtagccgtt
      241 gattgggatt catgtgttgc cgatggcgca tgtatcgaag cctgtccggt tcaagtattt
      301 caatggtata gaactgagca tgatgttcct gcaaaagatg ctcatgaaca accctgggaa
      361 ggaacaggtt cttctgttaa agaagagaga aaggattata ccgataaagc agatccaatt
      421 agagaacatg attgtatatg gtgtatggca tgtgtctcag tatgccctcc tcaagcaatt
      481 aaagtagatc aatcctctct agaattccat gaaaaggcat ctggaacctt caacgaatca
      541 ctttcaaaag gaagcgctcc accaccgcac gctcactaaa ttcttttttt tatttcgaca
      601 taaataataa attacaaata gattaacact atcgttgtat aaacagaaca atttatttta
      661 acaaatatga tctattgctt atttcttatt acatcataaa aattaaatag acatatgttc
      721 ttcttttaga agtatatatc actttaggtg ttagtgttgg ttgtagttac tgattcatat
      781 atgggaattt ttttgcctag tgatttaaat acaagactct ccgattttat aaataaaaag
      841 cgggaatttc catttataga aaaagacgaa ataataggta catattattt gtttggcaaa
      901 aatcaaaaaa ttagggaatc attggacata ttatcagttc atagtattgc aaaaaaaaca
      961 atggaacgaa cattaagcaa tattaaaatt tttaaaagtt tccagcatac aaaaattaat
     1021 tctgatttta ttagggaagg atatataaag agaatattgc agatatctat cgaaaataaa
     1081 gaatttaatt atcaaaaaat ggatatgcgt attttaagag atcctactat tctgtcaagc
     1141 tgttttgaac aacatattgt ttattataaa caagactact tttttcattt aatcaaacaa
     1201 ccattagaaa aatcagtaat accatctaat ttggtggata aacttgaagg aagaatgttg
     1261 atggttggat acaatgtctc agatgatcaa aagttaccat atgcaaatat acttgaacct
     1321 ttttttgaat ggctgcaaaa gatcgattga taaaaattat agacagaatt taaattttaa
     1381 tttatttcat tgatttatta tttggtgatc cgtattaaat gtaaaagtta aaaatttata
     1441 gttatttctc gtcgaatgat attttttttg tctgtattaa aatttgatag atgttgtctg
     1501 atctttgtag aagagtaatt ttgaaaggat ccttttatct aaattatttt tgaccataat
     1561 ttaattttgt atggttataa taccataacg tacattaaac agaggaaatc tctaataata
     1621 tgtggggatc caaactaaag caaattacga attattacta gatagacttt acgataaact
     1681 aggtacaact tcaaaaaaag aaatctctag attagaatta ccacaaccac agataatttg
     1741 ggttggtcaa agaacaattt ttagaaactt tatggaattt ccaaaagcat tacgacgtga
     1801 gccagaaaaa atattacttt atctaaataa agagcttgca tctgctggat atattattgg
     1861 agatagggta atctttcttg gccgtaaaga acgttcttca tttggtgctt taatagatag
     1921 atatgtaaag gattatgtta tctgcccagt atgtagtagt catgacacca gaacggaaaa
     1981 gaacaagaaa ttagggtttt tgttgtgcga agcatgtgga gctaaatctt ccattaaggg
     2041 taattatgca taatattttc aaattcgttt ataatcaaga taaaatacag attgttaatt
     2101 tattaaattt atttgcaaat ttaaaaatgt aatcatattt gagatgattt tgaaataata
     2161 tataattata ataaaatcaa taatgcgtta tttattcttc taaatatatc ttcaatttgt
     2221 tctcaatttg tactttaggt aacgcaccaa taattctatc gacaacttct ccgtacttga
     2281 agactatcat agtaggaata ctttggatac caaatctatt agaaatctgg tgattttcgt
     2341 ctacattgat ttttgcaaag acaattttac ctgagtattc ttttgctaat tgttcgatta
     2401 taggtgagat tatcttacat ggtccacacc aggttgccca aaaatctact aacatcaacg
     2461 gaaatttgtt tttttccaga tcaaaatttg aatcatttaa cggtattggt tcagtaattt
     2521 tttttaattt tgcagtaatt tctgccctct tttgcaactc attcattttt ttcttcataa
     2581 tagccgcaat ctcatcatct gaagaagaaa tcatatcaat tttatttgct aatctcgact
     2641 taatttgtct tatgttttat cctacgcgta aattttattt atatttataa cgatatctaa
     2701 ttattttgct ttctttctta atatgagatt atggtcaata ataatcaaaa tataatagaa
     2761 ccccaagaac cccaagaacc ccaagaaccc caaatagaag tcgactatta tgaatcctta
     2821 aacaaagaac taaacaaaac taaaattgag ttagagaaaa caaaagaaga gtcagaaatt
     2881 actcttaata aattaaaata tttgatggca gatttcgata attacagaaa acaaatcgaa
     2941 aaacagatga attcgactat agagacaaac aaagcaaata ttttggccaa atttttgaat
     3001 attctagatg attatgaaag ggcattagat gtaataaaga aaaatcaaga tattgatcca
     3061 gttttgatag atggcttgga tggaattatt aagaattttt atagcgcctt gttatcagaa
     3121 ggcgtaataa aaattgaaac cattggtaca ttattcgatc ctaataaaca tcatatagtg
     3181 agtttttcat atactgataa taaagatgaa aatataataa ctgaggaaat acgtactggt
     3241 tatatgatga atgacaaagt cttaagacca agcctagtaa taatatcgaa aaaaaaatat
     3301 aatcaacaag aagtaggtaa ctcaaattaa taaggtgaat attgatcatg ggaaaagtta
     3361 ttggtataga tttaggaact agtaattctg cagcagctgc tatgattggt ggaaaaccaa
     3421 caataattca ggccgccgaa ggagcttcaa taggaggaaa agcatttcca tctgtggtag
     3481 ctttcactaa tacaggtgat ctattagttg gagagcctgc tagaagacag atggtatcga
     3541 atccagaggg aactgtcatg gctgcaaaaa ggaagatggg tacagattta agatttaacg
     3601 taggtgggaa aaattattct ccacaacaaa tatcgtcttt cattttacag aaaattaaaa
     3661 aagattccga ggcatttttg ggtgacgttg tagacaaagc tgtcatcacc gttcccgcat
     3721 atttcaatga taatcaaaga caagccacaa aagatgctgg tgaaatagct ggtttgcaag
     3781 ttgtcagaat tattaacgaa cctaccgctg cttcacttgc atatggtttg gataagattc
     3841 aaaaagatct aaagatcatg gtctttgatt ttggaggagg gacattagat gtaacaataa
     3901 tggaaatggg gggaggagtt tttcaggtca aaagtacttc tggtgataca caacttggag
     3961 gaactgatat ggacaacgcc attgtagaat atattttgca agagtttaaa cagcaatctg
     4021 gtttagatgt tagaaatgat aaagcagcta tgatgagaat aagagaagct gcagaaaaag
     4081 caaagatcga gttatcaaat cttgtttcta cagaaattaa cttaccattt ctctcttatg
     4141 atcaatctac tggtccaaaa aatcttatta tcaatttaac tagatctaaa attgaggaac
     4201 ttttaagacc aatagtagaa aagtgtaaag gtcctatgat gcaagcaatc caggacgcaa
     4261 aacatgttcc aagtgacata gagaaaatta ttatgatagg aggaccaaca aggatgccaa
     4321 tagtaagaca attcgttgaa acagtaatgg gcaaagaacc ggaaagaggt gtagatccta
     4381 tggaggcagt agctatgggt gctgcaatac aaggcgctat aatttctgga gatgtttcaa
     4441 cagatattct tctagtggat gttaccccgc tgacattggg tcttgaagta cttggaggta
     4501 taaaagaaac attaattgaa agaaatacta ctataccaac taagaaaagc aaagttttta
     4561 caactgcagc tgattatcaa tctgccgtta ctattcacgt ggttcaagga gaaaggccta
     4621 tggctgcaga ttgtgtctct ttaggcacat tcaatttggc cggaatacct cccgcaccca
     4681 gaggagtgcc tcaaattgag gtaacttttg atattgatgc aaatggcata ttaaatgtca
     4741 ctgcaaaaga tttgggaaca tccaaagaag caaaaatcac aattaccgca agtacaaaat
     4801 tatctaaaga agaaatagat agattaaaga aagaatcaga tcaatatacg gaagctgaca
     4861 agaaaaagag agaagaggca gaacttagga acgaagcaga taatattgtt tattcagctg
     4921 aaaaactaat taatcaagat ttcaaagata aaattaaacc agaacagact gaaaaaatta
     4981 acaaatcgat acacgattta aaagatgctt tatctagtaa caatcttgaa gatataaaga
     5041 acaaaattca aaatacaaaa actctgttag cagaagtaag tacagaaatt tataaaaata
     5101 ttggagcatc aacaggcgga ggacctacag gcggaggacc tacaggcggg ggaacaacaa
     5161 gtgatacaac tcaagaaaat agtacaggtc aaggaaccaa tcaacaatca aatactgaca
     5221 attcaaatga aaaaacatca tcagccgggt cataaattta atcaaaacaa actagatatc
     5281 atatgtttcg tccaactata attttattat ttttcagtga gtaggttaat gacaagtaaa
     5341 aaagattatt atgaagtttt aggagtacaa aaaactgcta ctaaagatga aattaaaaat
     5401 agttatcgta aactagcttt aaaatttcat cctgacagaa ataagtcttc cgaggctgaa
     5461 gagaaattta aagaaatttc agaagcatat gccgtccttt ctgatgatga caaaagaaaa
     5521 cgatatgata catatggtca cgtaggcact gatgaagcgt ttagaggctc tgaagccaat
     5581 ttcgaggaaa tatttaaaga tatgggtttt gggggctttg caaaaacgat atttgagcaa
     5641 atgtttggtg acagaggagg attttcatcg ggagatccat ttgctggctt tagctttaat
     5701 ataggaggaa gtgaaagaag ccgaggccgc gatatcttgt atgatgttga actctcttta
     5761 gaagatgttt tgaagggaag aaaagatgaa atcgaggtgc caaagtttga caaatgtagt
     5821 gattgtaatg gaacaggagc atcaaaagga agcaaaccta aagtctgtag tgtatgtaat
     5881 ggaaggggac aaacacgtag agtatataat caaaatcggt tttcaacatt tatttcgttg
     5941 gaaacatgcc aaagttgtaa tggaaaaggg gaagttattg agaatccatg taatatgtgt
     6001 agaggatctg gtaaaattaa ggtaaaaaag aaacttaaaa ttagtattcc ttctggtgtc
     6061 gaagatggga tgacattaca attaagtggc gaaggagaat actctgatgt tggttctcca
     6121 ggagatctat tgatccgagt acatgtactt ccacatcaat tatttgaaag gttggatgaa
     6181 ggacacatat tacatgattt gactcttgat tatacaagtc tagttttggg aacagaagta
     6241 aaaattccaa ctctacaagg aaatgaaaaa ttaaaaattc cacctggcac atctgttgat
     6301 accatcttaa gacttaaagg aaagggatta ccgagatacg gaagttatgg aaaaggcgat
     6361 caactggtca gagttcatgt tcgtattcca aatatactga cagataaaca gaaatggctt
     6421 ttgaaggaat tagataaaga atttcaatag gaataacttt ttaatatctg ataagatttc
     6481 ttaattttat gacatatcca tttgacgaat ggttcagaaa aagaagactt ggaagttggt
     6541 ttccagatat tgacactatg atgcgagaaa tggaaaaaat gatgggagaa gcatttcaac
     6601 attttgaaca accagtgcca aaaaaattca taaaagaacg taaattagat gacggttcga
     6661 ctataaaaga atatggacct gtagtatacg gatattcagt aaagattggc gaagatggaa
     6721 aaccaataat aagaaaattt ggaaacatag atgctttttc tcatattctt acaagtgact
     6781 caacagaaat acaagatgaa agggaacctc taattgatgt gataatgggc aaagaagaaa
     6841 taaaagttgt tgcagaaatg cctggagttg aaaaagaaga tttacgatta aatgctaatg
     6901 aaaacaccct aacaatttca tgttcaacgt catccaagca acgttaccat aaaaaaattg
     6961 attttccaga gccagtagaa ccgacaacag gacgatcgca gtataggaac ggagtattag
     7021 aaataacatt taaaaagaaa aatattatta gtagtggagt ccagatcaat atcgaataaa
     7081 tctaaacttg ctaaatgtta ttttatttaa tcaatttttt atcatattca gtttagtttt
     7141 ttatgtcttt caaattatgt tgaatgacgc atttcttaaa attataatca tacattgtac
     7201 tacttcaaat tctaatttat tctaaattat aattgaaaaa tatatggtat aaaagcgtct
     7261 ttttttatct ttctttatga ttgaatttac tatttcgtct caatcgactc ttttagcttt
     7321 tcttatagga ctatcagcta ccatacttac tagatacagt agtattccac aaataattaa
     7381 gggtttaaag acaagaaaga tggatgatgt ttcattttgg ttaatttttt atttaacagt
     7441 tggtttattt ttatatgtta tttatggagt tatcatagat gatctgataa ttatttgggg
     7501 aaatgtcgtc ggtgttatta caaatttggt gttaattagc ttgaaaataa aatattctgc
     7561 taaacagttt ggataatatt tacaactaaa aactctaatt gaagtgaaat acttgtaaaa
     7621 tactaatgtg gttaaaaaaa gctgagctat cattatattt ttttttagta ttaatgttaa
     7681 aaaccggtaa ttctaatgtt attaaagatc tttcattttg agctcaaaaa aacggataaa
     7741 gatagaatta gaagatagcg aaggagataa atataacctt tcgttagagg gaaatttttc
     7801 aaaagagaag attgtacata taatggaatt aatggatatg gttcaatctg gtagaaaacc
     7861 aactaataat attacgagct ttattacaga taatgataaa gaaatattat ctgtggattc
     7921 aaagatatgg aatgtaatag agcaatcatt tagtagaata tcttttactt cttcagatat
     7981 tgctcaattg tacgaagaga gatataaaga gcccattaag ttgagtgtaa tttctacata
     8041 tttatcgaga tattgtacaa aaggaaaatt acttagaaca aaaagactta gagaatatgt
     8101 atattctctt ccaatatcat caaaagattt atcttctaat aacagtcaaa attgtttttc
     8161 ctctacaact cattataaca atttgtataa tattgacaat aagaccattc acgatcttaa
     8221 aaattaaatt ttcctagtga ttgtatatag tataatttgt tgtaaattat atcatttttt
     8281 tctgtctaca gaatcaattt ttataatcgt tgttcaatag ataaatagag tttattattt
     8341 tattttattt tattatgttt tgctagcgat atctttaaaa gtctccgaat ccaccaccat
     8401 cgaatccacc aaaatctccg gtgtctccac tatccatctc agagcttgtt tctcctccag
     8461 cagcttctgt tccagagtcg ccagccatag aatgttccat aggagtcaat gccataccta
     8521 caaacgacat cattgtcata aaaaatagaa tatctgttat acccataaac aacattaacg
     8581 gcatccatga tctattagct tccataaacg tttgtaattg tgctttattg ccttgtccat
     8641 tgttgtaaat ctgttgagct ttacgccatt tttgttccaa ctcttctttc tttgcattta
     8701 aaagtctaat accagtttct gttattgaaa tttctctttt tttgttacca aaaaaactc
//
LOCUS       DATIAS010000567         2594 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_919858, whole genome shotgun sequence.
ACCESSION   DATIAS010000567 DATIAS010000000
VERSION     DATIAS010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2594
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919858"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2546
                     /locus_tag="VLA74_11390"
     CDS             <1..2546
                     /locus_tag="VLA74_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51355.1"
                     /translation="IVAPPSIHPDNNNKYTLLNGINPVALTKKQISKLIDLFKNNNNN
                     NDYNSEFHYKSQNIEKDLKEIDEKTVYEIISRVKPYYKEGIRNDFILYFSGWLRKLDV
                     RYDNAEKLINELAIDDEERNTRIKTLKETYKKQDPEEIAGYSYLLELLSEQDNSSIQT
                     AIAKLKEIPKILEEKQIIKKGIKGHKKENNEAKKEKKEIVTFKYSQMGRGDLHEAILS
                     AGSLPFFTKYNHEKKEFELVENIEENSRILRPPEREEYPYTPYEFSGLEEIKHYKDFI
                     INNNIDIDYLFQTCKSIISKFNNQDNYKVTLIAADGILSYSQDRFSTIHYDFIVGGNG
                     SGKSSLGDTVGAIAYRAVIMTDPTAPNLFRLLGSAEPAQCTIVLEEADRIDKSPELMA
                     ILKTGYARNGRVPKINPNTLKQEFFFSYCQKVIISERSLSQSIAKGVNTRILPINCFK
                     GQTKYDIKEILNPTDTGGSQNKELLKELEDFRKLLLVYRLMHFKDPIPDLDIGVEGRD
                     KELVKHLIQLFYGSKCLQEIIESLQKFLDIKNQKKETSLDHVLLPIISDLIKDNGPQM
                     LFRTFWNVLKESIPGKEDEKKPNEYHTEDYGTLYSTTITNLLSDIFGATTKHGRKGNM
                     LIFDPKIIEKLSKKDKTKIIVTELSNQLQSSDDDEEKEENNEVDQEAYSHINDCCEGV
                     KGVSTPRRGIAQIIDAEKDSIEIQNSLVRSKDSNISNTNNNSNDYQNHQNQIIDSLVL
                     VNGNHKKEKSNSTPFSYAFTPFTPSHANKSITLIDGEVGLFTNPLISKSDLATGNYDP
                     EIINNIDRVHPNSDRWFCHNCTLRDDKWGMMKHPCSKNDINNKGGSKLI"
BASE COUNT         1076 a          386 c          427 g          705 t
ORIGIN      
        1 atattgtagc tcccccttct atacatccag acaataataa taaatatact ttactaaatg
       61 gaatcaatcc agttgctctt acaaaaaaac aaattagcaa actaatagac ttatttaaga
      121 ataataataa caataacgac tataattctg aatttcacta caaatcacag aacattgaaa
      181 aagatcttaa ggaaattgat gaaaaaacag tttatgaaat aatatctaga gttaagcctt
      241 attacaaaga gggaataaga aatgacttta ttctctattt ttcgggttgg ctaaggaaac
      301 tagatgtaag atatgataat gcagaaaagt taatcaatga actggcaata gatgatgaag
      361 aaagaaacac cagaatcaag acattaaaag aaacatataa aaaacaagat ccagaggaga
      421 ttgcaggata ttcatatcta ttagaattat tatcagaaca agacaacagc agtattcaga
      481 ctgcaattgc aaagttaaaa gaaataccaa aaatacttga agaaaaacag ataatcaaaa
      541 aaggcataaa agggcataaa aaagaaaata atgaagctaa aaaagagaaa aaagaaattg
      601 taaccttcaa atattcacaa atgggaagag gagacttaca tgaagctatc ctaagtgctg
      661 gtagtttacc attctttaca aaatataatc atgaaaaaaa agaatttgaa ttagttgaaa
      721 atattgaaga aaatagtagg atcttgagac ctccagaaag agaagaatat ccctatactc
      781 cttacgagtt ttctggtttg gaagaaatca agcactataa agattttata attaacaaca
      841 atatagatat agattattta ttccaaacat gtaaatcaat tatttctaaa tttaataatc
      901 aggataatta taaagtaact cttatagctg ctgatggtat cttatcttac tctcaggata
      961 ggtttagcac aatccattat gattttattg ttggaggtaa tggaagtgga aaaagctcat
     1021 taggtgatac agttggagca attgcctatc gtgctgtaat tatgacagac cctactgctc
     1081 cgaatctgtt tagattgttg ggatctgcag agccagcaca atgtactatt gttttggaag
     1141 aagctgatag aatagacaag tccccagagt taatggccat tctcaagaca ggttatgctc
     1201 gtaatgggag ggttccaaag ataaatccaa atactcttaa acaagaattc ttctttagtt
     1261 actgtcaaaa agtcattatt tcagaaaggt cattgagcca atcaattgct aaaggagtca
     1321 ataccagaat tttacctatc aattgtttta aaggacaaac aaaatacgac atcaaagaaa
     1381 ttttgaatcc aactgatact ggaggatcac aaaataaaga actattgaaa gaattagaag
     1441 attttagaaa actactatta gtttaccgat taatgcattt caaagatcca atccctgact
     1501 tagacatcgg agtcgaaggt agagacaaag aattggtaaa acatttgatt cagctatttt
     1561 atggttccaa atgtttacaa gaaataattg aatctttaca aaaatttctc gatataaaga
     1621 atcaaaagaa agaaacctct ctagaccacg tattattacc tattatctct gatttaatta
     1681 aagacaatgg ccctcaaatg ttatttagaa cattctggaa tgtattaaaa gaaagcattc
     1741 caggaaaaga agatgagaaa aagcctaatg agtatcatac agaggattat ggaactttat
     1801 acagtactac aataacgaat ttgctgtcag atatatttgg agcaactaca aagcatgggc
     1861 gtaaagggaa tatgctaatc tttgatccta aaatcattga aaaattgtca aagaaagata
     1921 aaactaagat tatagtcaca gaattatcga atcaactaca aagtagcgat gatgatgaag
     1981 agaaggaaga gaataatgaa gtagaccaag aagcctactc tcacataaat gactgctgtg
     2041 aaggcgtgaa gggtgtgagc actcctagaa gagggatagc tcaaataatt gatgcagaaa
     2101 aagatagcat tgaaatacaa aattcattag tgagatcaaa ggatagtaat attagtaaca
     2161 ccaacaacaa cagtaatgat tatcagaatc atcaaaacca aataattgat tccttagtat
     2221 tagtaaatgg aaatcataaa aaagaaaaaa gcaatagtac ccctttctca tatgccttca
     2281 cacccttcac gccttcacat gctaacaaat ctataacatt aattgatggt gaagtgggat
     2341 tatttacaaa tcctttaatc tctaaatctg atcttgctac aggaaattat gacccagaga
     2401 ttattaacaa catagacaga gtacatccaa attctgatcg ttggttttgt cataactgta
     2461 cactaagaga tgataaatgg ggaatgatga aacatccttg cagtaaaaat gacataaata
     2521 ataaaggagg ttccaaacta atttgacttt atcagaacaa gaacaacaag aacaacaacc
     2581 aaatcaacaa gaac
//
LOCUS       DATIAS010000568         2642 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_783024, whole genome shotgun sequence.
ACCESSION   DATIAS010000568 DATIAS010000000
VERSION     DATIAS010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783024"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..467)
                     /locus_tag="VLA74_11395"
     CDS             complement(126..467)
                     /locus_tag="VLA74_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51356.1"
                     /translation="MNENNDFSNSNKETELKCSLCKEPLFTEKDEEMTKEVIDGSIYF
                     FHTQKCFNVYKRLEDFYGKNIKNFIENKQFVFDTFWDNAIPTSDEIQEIKKNNNKSSK
                     PILKVIEQTIY"
     gene            complement(1251..1994)
                     /locus_tag="VLA74_11400"
     CDS             complement(1251..1994)
                     /locus_tag="VLA74_11400"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSF51357.1"
                     /translation="MGLPDFPIGWNRNQSYTNEQVYNFLSNITLQSEPGVFANYSDFG
                     MGILGHILAIDSGISYEKLVKDRILNVLGMDSTGIAMNSTGVTYPDILKSRLAIGHSG
                     GQEVGLEFIPEALQPAGALYSTANDLMKYLSANLGLIKTKINDMLQETHLIRSEYQQP
                     PATRATAELFSSNKSLSTSYVGLGWFVDTNLGTEIIQHSGEIDGYSSFMGFNPDKQVG
                     LVELCSCEGADMPMEVRESLAAFIIATLT"
     gene            2032..2163
                     /locus_tag="VLA74_11405"
                     /pseudo
     CDS             2032..2163
                     /locus_tag="VLA74_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612400.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(2286..>2642)
                     /locus_tag="VLA74_11410"
     CDS             complement(2286..>2642)
                     /locus_tag="VLA74_11410"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSF51358.1"
                     /translation="TIAAEASYCAAEQDKYWDYHTELYDNWGGERTGWITNDSLKQFA
                     RNIQIPDIEKFSNCIQSNKYLNIVQNNDNIARSMGLTGTPSFVLIKDNNIQSIIPGAL
                     PYEFFEQTLNGLLASS"
BASE COUNT          861 a          440 c          393 g          948 t
ORIGIN      
        1 aattaaacta atctttttat cttgtatttg gttttttaaa tcttttagta aatcttttac
       61 cgactctaca agatcaaatt cttccatctc aagagataaa aggtgacttt caatacgggc
      121 tgcctctaat atattgtctg ttcgattact ttgaggattg gtttactgga tttattatta
      181 ttttttttta tttcttgaat ttcatctgaa gtgggaatgg cattatccca gaaagtatca
      241 aaaacaaatt gtttattttc aataaaattt ttaatatttt taccataaaa gtcctccaat
      301 ctcttgtaca cgttaaaaca tttctgagta tgaaaaaagt atatagaacc atctattact
      361 tctttagtca tttcctcatc tttttcagta aacaggggct ctttacacaa ggaacatttt
      421 aattcagttt ctttgttgga attggagaaa tcattatttt cattcatttt ttctggacct
      481 aaatgcttat ggcaatatag gttctatggg ttttaaacta ttcggagatt ccgaatgttt
      541 ataagaagat ttaatttcct taagaagaaa gatcacttta tcaaatttat gttaataaca
      601 aatgcgagta agaaaaataa aggcaggaat aacaaatttc atattaaaga tgctagatct
      661 ataagctttt ttctaaatga gaggaactta agaaataaaa tcttgataag aaaaagtgaa
      721 tagttggagc tacctaaaat tatcctatta taaattctaa tactatttgt taatggcata
      781 ataccaaggt atttctattt ttctgctttt cacatcttgt gaataatctc atgaactatc
      841 atgttattat gaattgttct ttatagaaat catcttattg atggacatat attaattaag
      901 tgctttcttc attgtcttat attctatcaa ggtacaattc tattttttcc tcttctcatt
      961 aaaatttttt acaatttttg ttaaattgct gtattgaaat taaacaataa ctggtcccac
     1021 tttatagaag ggttcaaatc ccatctcctc tattgtaacc attatgaata acggttgtga
     1081 atcgttaaag caaagttttt taattatgaa ttcgcgatta tgatatagat tcctcactcc
     1141 cggcacttta gtctcagatg catatgaatt tatttacagt atgaccgtat gctagataca
     1201 catcaagatc tgctaatggt taaagacgat gaataatgtg atcgagattt ttatgtcaat
     1261 gtagcgatta tgaatgctgc caaagattct cttacctcca taggcatatc agctccttca
     1321 cagctacata attctactaa tcctacttgt ttgtctggat taaatcccat aaagctacta
     1381 tagccatcaa tttcaccgct atgttgtata atttccgtac caagattagt atctacaaac
     1441 catcctaatc caacataact tgtgctcaaa ctcttgttgg aagaaaataa ttcagccgta
     1501 gctcttgttg ctggcggttg ctgatattca gatcttatta aatgggtttc ttgtagcata
     1561 tcatttattt tggttttaat taaacccagg ttagcagaca aatatttcat caagtcattt
     1621 gcagtagagt acaatgctcc tgctggttga agtgcttcag gtatgaactc aaggccaacc
     1681 tcctgcccac cgctatgtcc tatagctaat ctagatttga gtatgtcagg ataggtcaca
     1741 cctgtactat tcattgcaat tcctgtgcta tccattccta gcacatttag aattctgtcc
     1801 ttaactagct tttcatatga aatacccgaa tctatagcta aaatatgacc caaaataccc
     1861 ataccaaaat cagaataatt tgcgaacaca cctggttcac tttgaagtgt gatatttgaa
     1921 aggaaattat atacttgttc attagtgtaa ctctggtttc tgttccaacc tataggaaag
     1981 tccggtaggc ccaatctaga acaatggaag aatagcgtta gctatcgtca gagatggatt
     2041 gtcgaatctg tcttctcctg tattaaaaga atgtttggtg aatatgttac tgcaataaga
     2101 tttgagaata tgataaaaga gataatacta aaagtatcat tgtataactg gtttcaagta
     2161 taactgttac ataatttacc ttagtaacag aaaatagatg actatctaaa cgagttacgc
     2221 aacagagcag caaatgaaaa aatacaatta ttaaaaaaat aaaaatgata tcaaaaatgt
     2281 aaggattagc tgctggctag caatccattt agtgtttgtt caaaaaattc ataaggcaac
     2341 gcccccggaa ttattgattg gatattattg tctttgatca atacaaagga tggagttcca
     2401 gtcaatccca tagatcgagc aatattatcg ttattttgaa caatattcaa atatttatta
     2461 gattgtatgc aattagaaaa tttttcaata tctggtatct gaatgtttct tgcaaattgt
     2521 tttagactat cattagttat ccatccagtt ctttctcctc cccaattatc atataattca
     2581 gtatgataat cccaatactt atcctgctct gcagcacaat aagatgcttc agctgctata
     2641 gt
//
LOCUS       DATIAS010000569        10212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_511487, whole genome shotgun sequence.
ACCESSION   DATIAS010000569 DATIAS010000000
VERSION     DATIAS010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 10212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10212
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511487"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1365)
                     /locus_tag="VLA74_11415"
     CDS             complement(<1..1365)
                     /locus_tag="VLA74_11415"
                     /inference="COORDINATES: protein motif:HMM:NF015089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSF51359.1"
                     /translation="MNLEYSKILGKKTFDDSLDLPENKKVILLSSIYSGEEHKVLLKF
                     YDPELEVIYFWKDQTNHKPYCYTKSQFTEKAKEIAKKEPKYELRYEKKIDLIADKEID
                     VVKILAPDPLSIGGTDESVREKITSWEADIKYHENYLYDNSLIPGTYYYRVGNQIFEY
                     KYELTKQIEGKLYGLLFDKDGDLNKNNTDEYNKYISQWINLLNQPIPELKRIAIDIEV
                     EAEEGRIPNPRDHDKKIIAIGMVGNDGFKKVYVLNYDYQNGSKNDKKKMIPEAEIFEN
                     EKDLISAAFKVLKSYPIILTFNGDDFDLPYLYTRSQDSRIDRDKKKGIEKNEIPIIIR
                     KESFIKRGMQAEPVQIKHGIHLDLFRTFQNRSIQIYAFNHKYSEFTLNAISQALLNDH
                     KLEFDVDITRLPVDKLAEYCLKDADLTLRLTTFNENLLIKLLMIISRIGHLPVDDVSR
                     FGVNQ"
     gene            complement(1701..2507)
                     /gene="tatC"
                     /locus_tag="VLA74_11420"
     CDS             complement(1701..2507)
                     /gene="tatC"
                     /locus_tag="VLA74_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HSF51360.1"
                     /translation="MSVKEHFYEMRSRILRVSFFIIIVIIFCVTFGIQYYSVNLNNSP
                     NGLDNIIKFPFIYPDPFNNLAIQITTFMKDMLLPAEVDLIQTAPGQAFVAQIYVAALI
                     GIIFSVPLIIKEAYEFLSPAIEEKKKKKIKLLKIFIPTISLFISGIAFSFLVVIPFTL
                     DFLYKYGESIGVVTFLNINDFISFVLQFLLGFGVTFELPIIMYIISLTGIIEYDFWKR
                     NFRYSVIILVIFGAIITPDGSGVTMWFISGPMILLYISGVFIIRITSRKK"
     gene            3038..3358
                     /locus_tag="VLA74_11425"
     CDS             3038..3358
                     /locus_tag="VLA74_11425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51361.1"
                     /translation="MGIHEFLLPDENIKFQSKTEVKYAEKKYNFLITDMRIILYAKRG
                     RFLKSDDIISERLDKLHEIKYCEKGLIFRTAKITIQSNINMDIFGSCSELKQLFNNLQ
                     VIVF"
     gene            3759..4154
                     /locus_tag="VLA74_11430"
     CDS             3759..4154
                     /locus_tag="VLA74_11430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51362.1"
                     /translation="MINYEKLYSISEIDSTIVSATNGKSLDIKISPSVSPIKSQDEIK
                     FKIAFLQPNSDKIQVHVDYDFIVFLDGDEIFSASKQTGQPLLHTAEGTVTIPYSFLSS
                     GLYIVKISVLGINFVPINPESADFTFQVS"
     gene            complement(4494..4850)
                     /locus_tag="VLA74_11435"
     CDS             complement(4494..4850)
                     /locus_tag="VLA74_11435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51363.1"
                     /translation="MISDLFDCINSLNLKIDEIEKEIQIQAEKIITEYKKYSARLREN
                     ETYFLSGIQYGVPLKSYLITVKGVEVLGEEVIDIGEFIKEVINFANNPKRKIEVLKDL
                     VTHLQKFQEITTTENE"
     gene            complement(5929..6417)
                     /locus_tag="VLA74_11440"
     CDS             complement(5929..6417)
                     /locus_tag="VLA74_11440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSF51364.1"
                     /translation="MISHWFSRVNSVIPRGFSRHYILNLLKEKPMTGKEIIDYAIYES
                     EGKWKPSPGLIYPMLGRLLEEGLITEIENGKYKITHKGLGIAEDIQSVHKTLQKQLDV
                     MFRLGNIGKFMAMDLIDRVSSVGSTLSANLDKMTEQEREKYKGFLKTELKKIEDQEQE
                     KK"
     gene            6815..7684
                     /locus_tag="VLA74_11445"
     CDS             6815..7684
                     /locus_tag="VLA74_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HSF51365.1"
                     /translation="MKKFEVISLKERLEKKDEIIILPGVYDALSARIAQNVGFNAAFQ
                     TGYGTSATLLGMPDFGFLNAGETIDNARRIINSVDIPILVDIDTGYGNPLNVWRMVTD
                     LEKLGAGGIFLEDQVWPKRCGHMKGKSVISKEDYVQKLKAAIDARKSKDFIIVARTDS
                     LAQYGIDEAIERGKEFQKIGADVIFIEAPKTLEEMKKITAEIDAPLLANMIEEGVTPN
                     LPAKDLEKLGFRMVVFPLSALYSSTYAIKNVFLSLQKTGMTKNLKKKMITFKEFNDFV
                     NLPKYNQLEKKYS"
     gene            7807..9198
                     /locus_tag="VLA74_11450"
     CDS             7807..9198
                     /locus_tag="VLA74_11450"
                     /EC_number="2.8.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase"
                     /protein_id="HSF51366.1"
                     /translation="MLIKKNESVTDQKTNLYSNPLYTRKFICNNEIAHDNSKNIWIHA
                     YGCSANFADSEIISGLLQKHGYKIVSEEGKSDLNIIVTCSVKDSTEHKILHKIGNLTK
                     SNKPLVVAGCLPKTERKKIEEINPNASLLGPNSLDKILELVEVAKCNKKGVFLADSDI
                     EKINLPRIRINKAISMVQIATGCLNQCSFCQTKIAKGWLKSYRLGSIIRQVQNDISEG
                     YKEIWLTSTDNGCYGKDINSTLVELLESCASISGNYKLRVGMMNPMHLTDLLDGLIRI
                     YKESDKIFKFIHIPVQSGSQRILKKMFRGDDINSFKSIISKFRKEIPEVTIATDIIVG
                     FPGESDADFNSTKDLIRETKPDIVNISKYSSRYGTQSSKLKKIRSDIVKNRTTVLHTL
                     CRSISKERNSLWKNWQGDIFLDEINNNIIQGRNYAYKSVIIQGDRSKLAIGDTVRVKI
                     SNYSNYSLFGNLI"
     gene            complement(9317..9643)
                     /locus_tag="VLA74_11455"
     CDS             complement(9317..9643)
                     /locus_tag="VLA74_11455"
                     /inference="COORDINATES: protein motif:HMM:NF013371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31e"
                     /protein_id="HSF51367.1"
                     /translation="MSKSDESATHVYTINLSKAWLTPRYRRTDRVINMIKEFAKRHMK
                     NENVKIDQELNEEIWRRGKTNPPRKVRVKMTTEDNSILVSSYQDILKDSKTEKKVSDE
                     EITQEN"
     gene            complement(9662..9820)
                     /locus_tag="VLA74_11460"
     CDS             complement(9662..9820)
                     /locus_tag="VLA74_11460"
                     /inference="COORDINATES: protein motif:HMM:NF002316.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L39e"
                     /protein_id="HSF51368.1"
                     /translation="MAARKNTSRKKRLIKKMRQNRPVPAWVIIRTHRQVRSNPKRRSW
                     RRSDVNIG"
BASE COUNT         3510 a         1511 c         1517 g         3674 t
ORIGIN      
        1 ttgatttaca ccaaatctag aaacgtcatc taccggaaga tgtcctatcc ttgaaataat
       61 cataagtaat tttattagaa gattctcatt aaaagtggtc aatcttaaag ttagatctgc
      121 atctttcaag caatattcag ctaacttatc tacaggcaag cgggttatat ccacatcaaa
      181 ttctaattta tggtcattta ataatgcctg cgatattgca tttagagtaa attcggaata
      241 tttgtgatta aatgcataaa tttgaataga tcgattttga aaagttcgaa ataaatccag
      301 atgtattcca tgtttaattt gtactggttc tgcttgcatt ccccttttta tgaaagattc
      361 ctttcttatt attattggaa tttcattctt ctctattcct ttttttttat ctcgatctat
      421 tcgcgaatct tgtgatcttg tgtataaata tggtagatca aaatcatctc cattaaaagt
      481 aagaattata ggatatgatt taagaacttt aaaagctgca gaaatcaaat ccttctcatt
      541 ttcaaaaatc tcagcttctg gaatcatttt tttcttgtca tttttagatc cattttggta
      601 atcataatta agaacatata cttttttaaa tccgtcattt ccaaccattc caatagcaat
      661 aattttttta tcatgatccc ttggatttgg aatccttccc tcttcagctt ctacctctat
      721 atcgattgca attcttttca attcgggaat tggttgattt aagaggttta tccattgcga
      781 aatatactta ttatattcat ctgtgttgtt tttgtttaag tcaccatctt tgtcaaataa
      841 taatccatac aattttcctt ctatctgttt agtcaactca tatttatatt caaaaatttg
      901 gttgcctact ctgtaataat atgtacctgg gataagagaa ttatcatata aatagttctc
      961 atgatactta atatctgctt cccatgacgt tattttttct cttacacttt catcagtacc
     1021 ccctattgat aaagggtctg gtgcaagaat ttttactaca tctatttctt tatctgctat
     1081 taaatcaatt tttttttcat atcgtaattc gtatttcggt tcctttttcg caatttcttt
     1141 tgctttttct gtgaactgag acttggtata acaatacggc ttatggttag tttgatcctt
     1201 ccagaaatat attacctcta actcaggatc ataaaatttt aataaaactt tgtgttcttc
     1261 gccggaataa attgaagaga gtaaaattac ttttttattt tcaggtaaat ccaacgaatc
     1321 atcaaacgtt ttttttccca atatcttaga atattctaga ttcaatattg cattgaataa
     1381 aatataatta tcaaatttta atcttttccg tgttctaatt ttggttaaga aatgaatatg
     1441 aatatttaaa acaacagtca ttcaagttca tatttgtctt tttcatccgt taatatataa
     1501 tgaccaaaat tatgatttat gtatggaata aatgcaatat atctgtaaat taaacaaagt
     1561 attcaataag caatgttaat gttgttatta tattttattt atccaattaa aggaatttac
     1621 tcactatcat ttgattaaat tctgtgcttt caattgcttt caatttaatc caagaattca
     1681 taaaatacac tcttttcaaa ttatttcttt ctagaagtta ttcttataat aaatactcct
     1741 gaaatatata ataatatcat tgggcctgaa ataaaccaca tagtaactcc actaccatca
     1801 ggtgtgatta tagcaccaaa aataactaaa attattactg aatatctgaa atttcttttc
     1861 caaaaatcat attctattat accagttaaa gaaataatat acataattat gggaagttca
     1921 aaagttacac caaatccaag aagaaattga agcacaaatg aaataaaatc atttatgttg
     1981 agaaaagtta ctacaccaat agattccccg tatttataca aaaaatcaag tgtgaacgga
     2041 attacaacta aaaatgaaaa agcgattccc gaaataaata aactaatggt gggaataaat
     2101 atttttaata actttatttt cttttttttc ttctcttcaa ttgcaggact taagaattca
     2161 taagcctcct ttattattag tggaaccgaa aatattattc ctattaatgc cgcgacataa
     2221 atttgggcta caaatgcttg tccaggtgcc gtttgaataa gatccacttc agctggaagc
     2281 aacatatctt tcataaatgt agtaatttgt atggctaagt tgttaaacgg gtcagggtaa
     2341 atgaatggaa atttaataat attgtccaat ccgtttgggg aattattcaa attaactgaa
     2401 taatattgta ttccaaaagt tacacaaaaa atgataacta taatgataaa aaaagaaact
     2461 cttaatattc tagacctcat ttcataaaaa tgttctttaa cagacattcc tgaagacaat
     2521 tctattgctg tttgtatttt ataatcatga tatataattg gtggtcttta gcatcagaaa
     2581 atcttatgca tatcttgtta tatttatttg ccttcaagca ggacatttga ctatgttata
     2641 aattatctaa atcgccatag ctagataact ttttgttttt ctttattttt tatttttaaa
     2701 cttgcaagta acaaacatta catattttct agttgtgctg gtacaccagc tttgggtctt
     2761 gctttaaccc caaacatgtt catatgagct acgttaatct tagagatcat ctaaatcgca
     2821 atttgaaaag gtataaataa ataatcgcat ctaaaaagta gctaattttt ttagttattt
     2881 aattctataa tgtacatcat ctggtaatag actaattttt tcaatgcaaa ttggcaaatc
     2941 tttttcccct tgagaattat ttaatttaat tatcaaattt gagaattagt tatgactaga
     3001 gtcaataaat aacacaattt ttaaaagatt tgatataatg ggcattcatg aattcttact
     3061 tccagatgaa aatattaaat ttcaaagcaa aacagaggtc aagtatgcag aaaaaaaata
     3121 taatttccta attacggata tgagaataat tctgtatgca aaaaggggac gctttttaaa
     3181 atcagatgac attattagcg aacgcctgga taagttacat gaaataaaat attgtgaaaa
     3241 aggcttaata tttagaactg ccaagataac tattcaatcc aatataaata tggatatttt
     3301 tgggtcctgt tctgaactaa aacaactatt caacaactta caggttattg tattttaact
     3361 gcttttcaat atcattttat attgccacag aaaagttggt ttgaaaagat tattatccat
     3421 tgatccgttt tgcaaaagtc aatattaatt atatattaat ttatgattaa tattatttga
     3481 atagttcagg aaattgaatg aatatcgtta aacataaatc caaatgttat gttttattta
     3541 atgtatttag ttagctacta aaattctcca gtcatttttc caagtcaagc aaaagaatat
     3601 caggatcgac ccttaattga ttattcgttt tgtatactta aaatgaataa cttgagacaa
     3661 taaataaata tactcttata ttcaccattt ttatgttgca acgtttaaaa tactgtttcc
     3721 tgctttttat aatcatatcc ataacaagtt attccgttgt gataaattac gaaaaacttt
     3781 attcgatatc ggaaatagat tcaaccatag tatcggcaac taatggaaaa tctctggata
     3841 ttaaaatttc accatcagtt agtccaatca aatcacaaga tgaaataaaa tttaagatag
     3901 cctttcttca accaaatagc gataaaatac aggttcacgt agattatgat ttcatagtat
     3961 tcctcgacgg tgatgaaata ttctctgcat ccaagcaaac aggacaacct ctcttacata
     4021 cggctgaagg aacagttact ataccatatt catttctgtc ttctggtttg tacatcgtga
     4081 aaatttcagt gttgggcatc aactttgttc caataaatcc tgaatcggca gactttactt
     4141 ttcaagttag ttaatggaaa aattttatca taataattcg tattttttat tgatttattt
     4201 tgttcaaaat gttttgacgc aattataagt taaaatttgg aattttctta cctgtgggta
     4261 gagaattaga tgaactaaaa ttatggaagt caacctttta tctgcaagtt ataactaaaa
     4321 ggacggatta tctaacatac cattagaatc gagtaaattt cgtttttctt taaggattgc
     4381 ttagtagtat tgagacatat tgatgaagat attagagttg gatttggcat tgataaaatt
     4441 cctctataat aatcaaattg aactagaaat atcaatcata agatacttaa tttctattca
     4501 ttttcggtag ttgttatctc ttggaatttt tgcagatgtg ttaccaggtc ttttaatacc
     4561 tctatttttc gtttaggatt gtttgcaaaa ttaattacct ctttaataaa ttcaccaata
     4621 tcaattacct cttctccaag gacttctaca ccctttacag ttattaaata tgattttagt
     4681 ggaactccat attgaattcc agacaaaaaa tatgtttcat tttcccttaa gcgggcactg
     4741 tatttcttgt actctgttat tattttttcg gcctgaattt gtatttcttt ttcaatttcg
     4801 tctattttta agtttaaact attaatacaa tcaaaaagat ccgagatcac agtctaagtt
     4861 agatatttat ctttttaagt atttggaatt atgaagttgt cattcttaac ggttctgacg
     4921 acttgaaagt cattattgga tactatatta gttccattgt attcaaacta cgttcaaaat
     4981 tacatattcc ataggagtga ggttctaact gaacccatcg gacaggctaa aaggtgtaag
     5041 aatatttgcc gcctgcatgc caacaagata aatgaatgaa atagagaaaa aggaacgtgt
     5101 atggtgtgtt atccttgata atttataata atatggttat gatataatat taagcttgac
     5161 aggaacatga ggataggatt atgcagatgc agattttcat agatgttaac ttaagtaaag
     5221 gctatagcta acaacgtttt atttatgtat gatatgaaaa ttaaatgaag gaaatagaac
     5281 atcaacttct attgaaatgt actctctcta tctatatttt tcttgcttta agtttacgta
     5341 ataatctaaa gtattaatac tctctatgga agtgaagaaa aagttacatg tctgtttgga
     5401 attgaataca aatgttttga gtcctacccc atctataaag aaaaaaaaag attaacagcc
     5461 tttcattaaa gacgaaactg ttattcaaag tggtggtcaa caattttagc tattgtttgg
     5521 tatagaacca cgcgaaaagt ctgcgcttgg aattaacatt ttagaagaac atgtttatag
     5581 gtgaaaaaca tcattagatc tttggttcga agggaaggaa aagatttggt atatgcctga
     5641 tagcggtaca tcgtatgata aagcatgaaa cataattgga ctgaagcccc atttgcattg
     5701 tgctttagac aaaaaactaa tggaaggtat caatcagtac gaacgatgga atggatagtt
     5761 tgatgactat tatgcatgtg tgaaaaggag aaagtagaag attggaattt attcatttac
     5821 gtagatggat acaattcgtt gttcagggta taattacaca atgagaaata ataataattt
     5881 tgagtaagga gctgaatatt gtcttaaatt aagagcattt tacgcgaatt acttcttttc
     5941 ttgttcttga tcctcaattt ttttcagttc tgttttaaga aatcccttat atttttcccg
     6001 ttcctgttct gtcatcttgt cgagatttgc acttaaagta gatcctacag atgatactct
     6061 atctatcaaa tccatagcca taaacttccc aatatttcct aatctaaaca ttacatccag
     6121 ttgtttttgt agagttttat gaaccgattg aatatcttct gcaataccca gacctttatg
     6181 ggttatttta tattttccat tttctatctc tgtaattaac ccttcttcta gtagtctacc
     6241 tagcatggga taaattaaac cgggagaagg tttccatttg ccttcacttt cgtatattgc
     6301 ataatcaatg atttctttcc cagtcattgg tttttctttt aataagttta aaatgtagtg
     6361 tcttgaaaag cctctaggaa tcacactatt tactctagaa aaccaatgag atatcattaa
     6421 acctggtata tcgctagcga tttattaaga tttctttgtc acatataaaa aagtataatt
     6481 ttattgagat gcaaattatt ctgatttgaa ttcttttctt taaaaacata tatctagttt
     6541 ttaatctaga tgtgtgatga caatgaaatg tcctatctgt gggtcgctta tgatttggtt
     6601 aaatgggtct atcagtcatg atcctccaat aaagtattat acatgtagag gttgtaaaat
     6661 tggagtttca agatattcgg aaactagcta cgatgtgtac gaaacagaaa aaaattgatt
     6721 accttaaatt aaatatctaa attaaatcca aattttttcg atttttataa taaataatct
     6781 aaaattaata agcttgttta ctcagtaaaa ttctatgaaa aaatttgaag taatttctct
     6841 aaaagaacga cttgaaaaaa aagacgaaat cattattctt ccgggagttt atgatgcatt
     6901 aagtgcaagg atagctcaaa atgtgggatt taatgctgct tttcaaactg gttatggtac
     6961 atcagcaaca ttacttggga tgccagattt tgggtttctg aatgcaggag aaacaataga
     7021 taatgctagg aggattatta attctgtaga tattccaatt ctggttgaca tagataccgg
     7081 gtacgggaat cctctaaatg tatggaggat ggtgaccgac cttgagaaat tgggtgcagg
     7141 tggtattttt cttgaagatc aagtttggcc taaaagatgc ggtcatatga agggtaaatc
     7201 agttatatca aaggaggatt acgttcaaaa gttgaaagca gcaatagatg caaggaaaag
     7261 caaagatttc atcattgttg caagaaccga ttctttggct caatacggca tagatgaagc
     7321 tatagaaaga ggaaaggaat ttcaaaaaat aggtgcagat gttatattta ttgaagctcc
     7381 aaaaactcta gaagaaatga aaaaaattac tgctgaaatt gatgcacctc ttttagccaa
     7441 tatgattgaa gaaggtgtaa caccgaatct tcctgcaaag gatttggaaa aacttggctt
     7501 cagaatggta gtttttccac tatctgcatt atattcatct acatatgcaa ttaagaatgt
     7561 ctttctttct ctccaaaaga cagggatgac aaaaaactta aaaaaaaaaa tgattacctt
     7621 taaagaattt aacgattttg taaatcttcc taaatataat caattagaaa aaaaatattc
     7681 gtaatcattt ttcattttta caattctatt tcaaagttgt atgaattaat aattatataa
     7741 tacctaatat tcttaccaat gtagtatagt ttgaatataa ttaaaacaag tcttattgaa
     7801 tctatattgc ttattaagaa gaatgaatca gttacagatc aaaaaacaaa tctatattct
     7861 aatcctctat atacaagaaa atttatttgc aacaatgaga ttgcacacga taattcaaaa
     7921 aatatttgga ttcatgctta tggatgttct gcaaattttg cagattctga aatcattagt
     7981 ggattgttac aaaaacatgg atataaaatt gtaagtgaag aaggtaaatc cgatcttaat
     8041 attatagtaa cttgctcagt taaagattct actgaacaca aaattcttca taagataggc
     8101 aatttgacaa agtcaaacaa accattagtg gttgcaggat gtcttccaaa aactgaaaga
     8161 aaaaaaatag aagaaattaa ccctaacgct agtctactgg gtccaaattc attagataaa
     8221 atcctggaac tagttgaagt agcaaaatgt aataaaaaag gtgtatttct tgctgattct
     8281 gacatcgaaa agatcaattt accgagaatt agaataaata aagctattag catggttcag
     8341 atagctactg gctgtttaaa tcaatgttct ttttgtcaga caaaaattgc gaagggctgg
     8401 cttaaaagtt atcgtctcgg atcaattatt agacaggtac aaaatgatat ttcagaagga
     8461 tataaggaaa tatggctaac ctctactgat aatggatgtt atggaaaaga tattaattca
     8521 actcttgttg aattattgga atcatgtgct tcaatttctg gaaattataa actaagagta
     8581 gggatgatga atcccatgca tctgactgat ctactagatg ggttaataag aatttataaa
     8641 gagtctgaca aaattttcaa attcatacat atccctgttc aaagtggaag tcagagaatt
     8701 ttaaagaaaa tgtttcgcgg tgatgatatc aattccttca aaagcattat atctaaattt
     8761 aggaaagaaa ttccagaggt aacaattgct actgatatta tagtagggtt tcctggagag
     8821 tcggatgctg atttcaattc aacaaaagat ttgattcgcg agacaaaacc agatattgta
     8881 aatatctcaa aatacagttc cagatatggt acgcaatctt caaaattaaa aaaaataagg
     8941 tcagacattg tgaaaaatcg taccactgtc ttacatacac tctgtcgttc tatatctaaa
     9001 gaaagaaatt ctctgtggaa aaactggcag ggtgacattt ttcttgatga aataaataac
     9061 aatattattc aaggcagaaa ttatgcatac aaatcagtaa tcatacaagg tgatagatcg
     9121 aagttggcta ttggagacac agtcagagta aaaatctcga actattctaa ttattctcta
     9181 ttcggtaatt tgatatgaat tcacaaattc agtttttctg ttctaagaca tctttttttg
     9241 cttgcaacat tggataacac aatgaatttt aagtcatgtt gagccttata atattccaaa
     9301 atatgaaagt tacaaattag ttttcttgcg ttatttcctc atctgatact tttttttctg
     9361 ttttagaatc ttttaggata tcctgatatg acgatactaa tatagaatta tcctctgtag
     9421 tcatttttac acggaccttt cttggcgggt ttgtttttcc tcgtctccat atttcttcat
     9481 tcaattcctg atctattttt acattctcat ttttcatatg tcgtttagca aattctttta
     9541 tcatgttaat tactctatca gttcttctat atcttggggt taaccatgcc ttgctaagat
     9601 ttatagtata aacatgagtt gcactttcat cagattttga catcactcac acctcgcatt
     9661 tctatcctat atttacatcc gatcttctcc aagatcttct ttttgggttt gatctgactt
     9721 gtctgtgagt tcttataata acccaggctg gcaccggcct attttgcctc atttttttga
     9781 ttaatctttt ttttctggat gtattttttc gggcagccat tttattaaat aaatattttt
     9841 ccgcctttta agtgttgatg tgtataagtc tgaacgaaga ctattacaaa ttaatctttt
     9901 atcagataat attcaaactt aataaaacat tttaacctaa taaaatttta ttaaaatgct
     9961 taagctctgt gagatatgct acgattttat gaaatctatt ggatataaag acaaaatcaa
    10021 tataacagtt gttgaaaaaa aacagtgcaa ggggatctat cataaaaaat tagtggatag
    10081 tttcaaaaca taacaggttt gttacactga ttcgtttgtg aaattacatt gtatgcatga
    10141 atcataaata tcaccatcaa gatggttaaa atgagttcca caagtcttgc atgtatgatg
    10201 aacctcatcg aa
//
LOCUS       DATIAS010000570         2419 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_376088, whole genome shotgun sequence.
ACCESSION   DATIAS010000570 DATIAS010000000
VERSION     DATIAS010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376088"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(366..809)
                     /locus_tag="VLA74_11465"
     CDS             complement(366..809)
                     /locus_tag="VLA74_11465"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HSF51369.1"
                     /translation="MLDNWQIGLQLEFLIDIIFALAAGFVIGAERESRGKPAGISTNS
                     LVIGGAMLFTYLSAAVDPNSTSRIAAQVVSGIGFLGAGMILKGEVDKKITNLTTAASV
                     WYSAAIGMAIGFNFYIIALAAVIFAVLVPRIPHITKIKSNIEDLD"
     gene            1107..1274
                     /locus_tag="VLA74_11470"
     CDS             1107..1274
                     /locus_tag="VLA74_11470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51370.1"
                     /translation="MKLIRLKSLSFDQKDAIKYFDCNEGDIKSTSFPTEANLFKAKSQ
                     VYNQKKFTFIT"
     gene            1744..2355
                     /locus_tag="VLA74_11475"
     CDS             1744..2355
                     /locus_tag="VLA74_11475"
                     /inference="COORDINATES: protein motif:HMM:NF014419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51371.1"
                     /translation="MNGKKPNEVATLKVAEAEQRDVGRKIARVDPEIVERLNITTGDA
                     LELSSLGRKTTVLSWPAKESDRGKGIIRIDGLIRNRLDVGINDLIEIKTVKSKDAKSI
                     TFAPTEPLRITGGEQYLAEYLNGALMTKGDTIPINVMGRRIDLVVISTNPSGPVIIND
                     STEIIISEESSKAIQISKEGGASASITYEDIGGLGDAVERVEK"
BASE COUNT          939 a          325 c          361 g          794 t
ORIGIN      
        1 gtaaaagcag aattggaaca ggattgttag caatatttgt tttagtaggt tcatgtggat
       61 atgtactatc agaattatta ggatggaaag aaggtttaag caaaagattt agtcaagacc
      121 attatttttt taaatttcta ttagatataa aatgagtatt atatatagaa agggtagctt
      181 ctttttcaga atttaaaatt tattcaaatg agtatatttt acatcataca ttcatgaata
      241 tctattgagg atgattataa tacttctcat agtcgatata aaatatgtga ctctttttta
      301 taatgcaacc gcaaaagaag aaaatattag aacatgtgaa acatacacta tcaggtataa
      361 atgagttaat ctaaatcctc tatattactt tttatttttg taatatgagg gatacgagga
      421 actaatacag caaatattac tgctgctaat gctattatgt aaaaattaaa tcctatagcc
      481 attcctattg ctgcagaata ccaaacactt gctgcagtag ttaggttggt aattttttta
      541 tctacctctc cttttaaaat cattcctgcc cccaaaaatc ctataccact aacaacttga
      601 gctgctatac gtgaagttga attagggtca acagcagcag agagatatgt aaataacata
      661 gcaccaccga ttaccaaaga gtttgtacta atacctgcag gtttacctct tgattctctt
      721 tctgctccta taacaaatcc agcagcaaga gcaaaaataa tatctattag aaattcgagt
      781 tgtagaccta tctgccaatt atctagcatt taaggttgga tatgtgatcg tcttatctat
      841 aaattatatc attataaaat tattggacaa acaaaaaagt tatcttattc gtagtaaatt
      901 aattatattt acataatgac ttatcataat gcaattatgt ctttaaattt aattttcttt
      961 aaaatatact ttataatcat gataaattaa ccgaagaaag aaaaagtgtt aatgttgtaa
     1021 cattaattgt taattgacta caactcgttc ttatcaagaa ggataaacaa agacaatgta
     1081 tttgctacat ttttctctag gtagttatga aattaattcg ccttaaatcg ttatctttcg
     1141 atcaaaaaga tgcaattaaa tattttgatt gcaatgaagg cgatattaaa tctactagtt
     1201 ttccaactga ggcaaattta tttaaagcaa aatcacaagt ttataatcaa aaaaagttta
     1261 cctttataac ttaacaatta taaaatgata atgataatta atgatcgaaa cgctagaaca
     1321 tcctctacca tctaaaatta agcagactat tattaattaa tatcaattaa ctaataataa
     1381 aaaaatacag ttccatttaa tgataaaaat ccaaaatctc tgtaatcgac tgccactaat
     1441 tacaaccact ataatttaat ttcataaaag aattatacaa attttcaaat gacgtaatca
     1501 aggaaaaata aagaaatctt caacaaaaat aattctattt gactaaatta gtattttaaa
     1561 ttataatata attaatttct aataagttga ctagaaggtt atttttgtaa taatacaatt
     1621 acattaatat tcattgttat atattgataa aaaaaatatc attattgata aaaaatgact
     1681 gtaattgtat atttaatcta aatataaata atgaatatgt tttaataata tatggcttct
     1741 aacatgaatg gaaaaaaacc aaatgaagtt gcaactctaa aggttgctga agcagaacaa
     1801 cgtgatgttg ggagaaaaat agccagagtt gatcctgaaa tagttgaacg tctaaacatt
     1861 actacgggtg atgcattaga attatcatcc cttggaagaa aaacaactgt tcttagctgg
     1921 cctgcaaaag aaagcgatag aggtaaaggt attattcgta tagacggatt aatcagaaat
     1981 agattagatg ttggtattaa tgatttaata gagatcaaaa cagttaaatc aaaagatgct
     2041 aaaagtataa cctttgctcc tacagaacca ttgagaataa ctggtggaga gcagtatctt
     2101 gctgaatatc tgaatggtgc actaatgacc aaaggtgata caataccaat taatgttatg
     2161 ggcagaagaa tagatttagt tgttatttct acaaatcctt ctggtccagt tattattaat
     2221 gattctacag aaatcataat atcagaagaa agctcaaagg caatacagat ttcaaaagaa
     2281 ggtggagcat ctgcatctat tacttatgaa gacattggag gattaggtga tgcagtagaa
     2341 agagtagaga aatgattgaa ctgcctctaa gacatcctga actttttaag agattagggg
     2401 tagaagctcc aaagggtgt
//
LOCUS       DATIAS010000571        20806 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1465071, whole genome shotgun sequence.
ACCESSION   DATIAS010000571 DATIAS010000000
VERSION     DATIAS010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 20806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20806
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465071"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1051..1845)
                     /locus_tag="VLA74_11480"
     CDS             complement(1051..1845)
                     /locus_tag="VLA74_11480"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HSF51372.1"
                     /translation="MLDIIYEIVKSIDISVARRENFAIAFSGGLDSSLLAKIVKDNFK
                     DVTLLSIGFPGSHDIEFSKFISNKMSMKHITYEINIENFIIVLKKIIKNIPCNNLSHI
                     ENCVAFYYISFLASSNGFNTVLTANGFDELFCGYDRYRQIFSDGIVEINKFMDKKIEN
                     EQMLVKEIQEVSNEFNVSIKQPFLSCDFIEYAKKIPINKKITSSNDLLRKHILREVAI
                     LLNVPVEAALKPKKALQYGSLIHKNLIKGIKKEDEIRKLLLTKINH"
     gene            2048..2860
                     /locus_tag="VLA74_11485"
     CDS             2048..2860
                     /locus_tag="VLA74_11485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HSF51373.1"
                     /translation="MTRNLVESDIKYINHNGVHLSNRTKLSLSNLFIFLGKDHEIDAK
                     IMSPNNKMFIIDFKIEDNKFIQVIDSQDDFDKFNKIKEHLPDLDIVAIGSSKYAGKST
                     EFESLFLFDSKNCRIGSIFIEDPSLSFDYAHILPLVTKCSILHGHTSTVMVEIIGNMS
                     NGLVMDFSEAKRLIKESINDLDHKFFINRRYLLKEDEIYYFVQFEGPRGFFNLQLPKS
                     TVYLLEDEATVENLSREIIKILSPKMPKNIDALGVYIYEGVNKGAHLLANLK"
     gene            3024..5420
                     /locus_tag="VLA74_11490"
     CDS             3024..5420
                     /locus_tag="VLA74_11490"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HSF51374.1"
                     /translation="MEPKINLKSWNHILESKILKSWEDEDLYNFNLKENNIKNIFVID
                     TPPPYPSGRPWHIGAAAHYAQIDMIARTARMDGKIVMFPIGIDRNGLPVEIYTERKYK
                     VKMRQMEREKFLDLCKSALDDLESEMINIMKNLGISANFKEYYRTDSVEFRSLTQKTF
                     IDLWNKGLVYISNRPNNYCTDCGTTIADAEIIYEDLPTNLVYMYFGIENSNTDKLIIA
                     STRPELLFACQAVIVNPKDDRYYPFHGKKVILPLFNRKVPILVHHSVKPEFGTGMVMV
                     CSYGDQNDVQVFRDLNLKEIVALDQNGYTTDEAKPYQNLMINNAREKIVKDLREGGFV
                     EREEKVVHRTPLCERSKTPVQIIPLHDYYLKQLEYVPVLKAISKNICFYPEIHKQILN
                     NWLDAISIDWPISRRRFYGTEIPVWFCNKCQTPNLPDSGQYYQPWKERPPFDRCSKCG
                     STEFTGEEKTFDTWMDSSITPLFISKFSRDEKFYKHTYPCTIRPQAKDIIRTWLYYTL
                     LRCYQLTDTLAWNNAWVMGYGVDEKGKKMSKSKGNVIDPFPVIQQFGADTFRFWSASE
                     TNLGQDFRCSEQSISISQKFLSKLWNLGRFLSSFPIPKEIFADIDVKNILPTDKWILS
                     ELFRLVENCSKGYNIFNFFIPSNHIRDFTWNLFASHYVEMVKSRVYDDSDPTAQNSAL
                     YALHKCFSTILLLLAPICPFITEELWKTLYSSRSIHLQKRPLTNDFFKDFEKFTEKIV
                     EFNSFVWNKKKESINPHTGKPASLKDPISLSVPLELQEFEKDLQYMHNLHNINDINDN
                     "
     gene            complement(5497..5883)
                     /locus_tag="VLA74_11495"
     CDS             complement(5497..5883)
                     /locus_tag="VLA74_11495"
                     /inference="COORDINATES: protein motif:HMM:NF042555.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HSF51375.1"
                     /translation="MVNLPMDYNKLCKSIFALHDDIRYAGVVDESGTLIAGGMRRGID
                     SIVDETSEELYLAQTSIRRSMRERFDETLGKVRFSYVEREKISILTIYLDKMVVLITL
                     EPNIDSHTVIDIAEDSLDMIDGKIDS"
     gene            complement(6890..7195)
                     /locus_tag="VLA74_11500"
     CDS             complement(6890..7195)
                     /locus_tag="VLA74_11500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51376.1"
                     /translation="MNEDRSVKDIVETGFGTIGKIRILRTMAEENKLFTVYALHKKTH
                     LKREDIKRNLSELIQINWVIEQKLGNYVYSLNREDKYIKKIISFFQDIGYTGEKHYL"
     gene            complement(7199..8362)
                     /locus_tag="VLA74_11505"
     CDS             complement(7199..8362)
                     /locus_tag="VLA74_11505"
                     /inference="COORDINATES: protein motif:HMM:TIGR02928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF51377.1"
                     /translation="MEESFIFKDRTKLSPRYIPKELPHREKQIDLLKRIFSNLKNDPD
                     KYPLTILQIIGQAGIGKTSTLLRFGNLLKEELANNKINSKIVYINLKLQGGNKYAIYK
                     YMLGCIAPELPAQGLSAEEMLRQMIDYLDNTSSYALIILDEIDYLIKISKDIGIIYDL
                     TRLNEFNPNKRCNVKGVIFIARSIEFYEKLDEAELSSLGRVPIGFPTYTIEQVSDILV
                     QRSVEAFHKEVISTDIIDWISRIIISSEINGDIRYALDLLTYAGNIAENEGTKKILLD
                     QVKRVHEQIYKGITDEDIKDLSKEQIVILLAIIRGLRIKKKDYVELKEIRMQVLDISE
                     EIKIKKLDVEDVLTELDTKKIIRIHSLKKISLLSASIDKLEKILEDIINGKKN"
     gene            complement(8494..9411)
                     /locus_tag="VLA74_11510"
     CDS             complement(8494..9411)
                     /locus_tag="VLA74_11510"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF51378.1"
                     /translation="MQIENLIDNEGKECIEGFLICPDCNSKYPIIEGVAIILKNFPNY
                     IQNRTEMYGKWLLECQTNEMKDFLRNTVEYLSSPIGSNIYEDGGIWYSPYKWLQLEKH
                     DEDRLIKSLRWNINPNELYDRVISNINPKLDGIALDLGCAMGKTTLKLAKKYSFVIGV
                     DLSFSFIKEARKLMQEDIQGNAEFCVCDVSSLPFHNMKFDLILAMNLIELVNPKELLL
                     SVHKLLKPHSDVIFTDPYDYNRGKEIEKKYEARSFRELIEESGFEINESNQKKESFIP
                     WILKINERVYLYYFVDFIKAKKLSKHKLF"
     gene            complement(9607..10941)
                     /locus_tag="VLA74_11515"
     CDS             complement(9607..10941)
                     /locus_tag="VLA74_11515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51379.1"
                     /translation="MLKNFLYVQLLTVLFVVVFFMFSPIQSVVADGLFEEKLPPASVG
                     DREASLYTKISPPILTSESKENAFFELKLFDAKTDKNIEHISYFIAVEKDGKLIMRDL
                     FHSHQGPLKLKIDPQEGNFINIFGSTEPFLGGWTSETGDISVSGPILLEGGLYHFAIE
                     IFGIDNDRNIFTPETAPRFDSYLSVGDIYKDNIKEGDKNYNISIISYYDQIQNFTYDS
                     PKKDISWIMPFNWDLKRIQEQNIFVHEEVKIPKVFNEFGNSTSFHALVNGNPLTGRAI
                     AIDPFTEEKNLILHFLLNKADILRIAESLQNQGIKTMTFNLSPAKEKIVETTPEIVSD
                     RGGILTRFQWPSEVLSNQDNALKLTFSDALADSAIKGDIKYDLTFYDQNGNQIIKKEN
                     LIAENASDSQTIKFPSKGIYQIELNIKGITFPDIVAADETRNGISRGIVVVP"
     gene            complement(10996..11700)
                     /locus_tag="VLA74_11520"
     CDS             complement(10996..11700)
                     /locus_tag="VLA74_11520"
                     /inference="COORDINATES: protein motif:HMM:NF015545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis protein"
                     /protein_id="HSF51380.1"
                     /translation="MRLSIIIAEAAIETIPKNLQNIIAVKNHAKKMKRRVKEILLDIN
                     YHYSAMEKGGIESRWKRGRPDIVHLCLLCILSTPLFYNSLVGVYIHTIDNKVILIGEN
                     LRIPKSYKRFEGLMMQLFIEKEILSSNSDREILLQVKDMTFSELIGKIVKPDKIIGFS
                     TFGKYQDIKTILTENLKKDDAHYVFVIGGFQSGHLSQEVIDRMDKIYSISKYSLEAHV
                     VVSRLIYECEKFLSIQ"
     gene            11840..12139
                     /locus_tag="VLA74_11525"
     CDS             11840..12139
                     /locus_tag="VLA74_11525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase P subunit"
                     /protein_id="HSF51381.1"
                     /translation="MVKSEAKLVAYERISILIHSALSEKHQNYELANKQAQLAKKIAK
                     RLRLKLPYNLRQFYCKKCKNFISPGYNSRVRIGRSNVKAIRITCLKCNYVYRKLF"
     gene            12198..12650
                     /locus_tag="VLA74_11530"
     CDS             12198..12650
                     /locus_tag="VLA74_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19e"
                     /protein_id="HSF51382.1"
                     /translation="MAKVYDVPADKFIEKLAGYLKNDKKIEPPSWSYFVKTGPHTEKI
                     PQNKDWWYTRCASLLRKVYIHGPVSVADLKGEYGGKKQRGYNLAHHVDASGGIIRTGL
                     KQLESSGYIVKKDKGRIISEDGMKRVDRLATELHKELQKDFPELGRYS"
     gene            12663..12950
                     /locus_tag="VLA74_11535"
     CDS             12663..12950
                     /locus_tag="VLA74_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HSF51383.1"
                     /translation="MSLPQNNNPSEEERKREAEAQAMRQKVMTVLLDASARQRLANVR
                     MVKPELANAVENYLVNAASSGRLNRALTDDELKQILLSIQSPKKDFKINRI"
     gene            13046..13702
                     /locus_tag="VLA74_11540"
     CDS             13046..13702
                     /locus_tag="VLA74_11540"
                     /inference="COORDINATES: protein motif:HMM:NF019976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein"
                     /protein_id="HSF51384.1"
                     /translation="MLDDFLHPKLLLKVISHIEAGRYHLKEFQNTLELDNDSIFQAIV
                     KYLLNNNIGQLSEKDKTISFSRSDKILITLIAIRRGCEIQECSRLLSWQDFESLTSEI
                     LGHFEYVTNVNILLTKPRCQLDVIAIKKDFLISIDCKHWKNYSKSAIMPYVDKQIIRT
                     KNYLRNNKKIKKALPMLLTLYDSNFRFINGIPIVPISFFKSFIFEFESFNDNIAYISR
                     "
     gene            complement(13800..13940)
                     /locus_tag="VLA74_11545"
     CDS             complement(13800..13940)
                     /locus_tag="VLA74_11545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51385.1"
                     /translation="MDIFGNLIQQLNVPINLDTFGVWIPLAFGLAVGLAYVIASGLRR
                     PT"
     gene            14140..14412
                     /locus_tag="VLA74_11550"
     CDS             14140..14412
                     /locus_tag="VLA74_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L44e"
                     /protein_id="HSF51386.1"
                     /translation="MQKEMRKFCPKCKTHTAQSVSLYKKGKDRKTALGARRHAEDKKG
                     YGGQKFPELKRTAKTTKKITLKYTCKTCQRKSMREGMRMRKLEISA"
     gene            14434..14631
                     /locus_tag="VLA74_11555"
     CDS             14434..14631
                     /locus_tag="VLA74_11555"
                     /inference="COORDINATES: protein motif:HMM:NF013803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S27e"
                     /protein_id="HSF51387.1"
                     /translation="MNKENILIPQPLSEYLTVQCTKCNDKIIIYSHTSKNIYCKTCNE
                     LLAQKSGGKAKIFGNIIANLD"
     gene            complement(15061..15711)
                     /locus_tag="VLA74_11560"
     CDS             complement(15061..15711)
                     /locus_tag="VLA74_11560"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSF51388.1"
                     /translation="MSKKKVNIIAVIMCGGKGTRMKKNYRTDKPMIKLGNKRMIEYMI
                     DNLINTKRFLKIVICSSKNTVRTKSFLLKKIKRKIIDDLEFVETDGDSYSLDLISILK
                     KFPNDMIFVVSADLPLLSKDEINEILKSCDFRSPCNSIIIEKEFVEGLGIKPSVSFTY
                     EFKEYCYSGIEIFNPSKIYDFKHEIPERFIVLNQKGIAVNVNEKSDLEKAKRIMQI"
     gene            complement(15714..16472)
                     /gene="cobS"
                     /locus_tag="VLA74_11565"
     CDS             complement(15714..16472)
                     /gene="cobS"
                     /locus_tag="VLA74_11565"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: protein motif:HMM:NF014685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HSF51389.1"
                     /translation="MPFDNIFSILSFLTIIPVTKRKGFDISYIAKNMYLFPIAGFIIG
                     LSVGSLAFILYDHLQDLMLGMMVTIALIAFTGLHHTDALADLADGLMVRGSKDIKHKV
                     MTDPGNGTAGTVILIIYIVGIIILVSNINNKFELFSLIIIAETLSKYSMVLQCYIGKS
                     AWEGMNTIFITEMKNKKKFIVSTIVMVIILIIFGLGVYQVALSLTGMLLVSLLLLLIS
                     NRSFEGISGDVIGACNELSRLFIYFINVVIMGST"
     gene            complement(16462..17442)
                     /locus_tag="VLA74_11570"
     CDS             complement(16462..17442)
                     /locus_tag="VLA74_11570"
                     /inference="COORDINATES: protein motif:HMM:NF002281.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HSF51390.1"
                     /translation="MISSIDIIFILILSITLDLAFGDPSNRFHPVSWIGKIVKYFIPK
                     LKITKKENQYEEKIRGVVFTISFIVVSALLVQVFLIYLKNIYFFMFFILSIYLLYSTI
                     AIKNMDKHVDNIINSLKRNDIDNARLKLSFIVGRDTQKLDEQHILSAAIESIADSTVD
                     GIISPLFYFSFFGPTGAFVFRIINTLDSMIGYRNNYFVNIGWMAAKADTFANYIPARI
                     TSLLMIISSIIARADWKNSIKILMRDRNCSISVNSGYPMSAMAGALKIRLEKIDHYAL
                     GNPEEILSIQKCILAIKIMKMTTILFCLLISIPTILLLGLLKWWSIVFAI"
     gene            complement(17439..18332)
                     /locus_tag="VLA74_11575"
     CDS             complement(17439..18332)
                     /locus_tag="VLA74_11575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HSF51391.1"
                     /translation="MEHAKILMVQGTSSGAGKSTLVIALCRILSDLGFRVCPFKAQNM
                     SSKIFNISKSEVISNIQAVQAIAARNKPSWKINPILLIPVGNYRSRVFIKGKFYAEMT
                     ASKYYKDFVLQTGFPMVLESIKTLRKDNDILIVEGAGSPAEINIAKYDIANMLLAEKT
                     KSPVLLISDIERGGCFASLVGTMELLQRKHQKLVKGFLINKFRGNKGLLKNAIKHVQS
                     VRNMKCLGIIPKIDFSLPEEDSLDGTKSKTHPTNDDNNNSEHFTYSKEILDQQIDILS
                     KEVRKNIEIEFILDKVLKLTR"
     gene            complement(18383..19531)
                     /locus_tag="VLA74_11580"
     CDS             complement(18383..19531)
                     /locus_tag="VLA74_11580"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HSF51392.1"
                     /translation="MIESNYGQENSYINNQTEFKRLDSCTHGGLYSTDNNQEIRIDFS
                     SNINPLGISRKVLSTISQNIRNVSITYPDPKCRELRRRISKYLDYNILPECITVGNGA
                     TELIHQFVRSFPYRALIPIPTFCEYELAVRRMGLKIDFIDPLENFQIDNDLMIKKLKK
                     RNNSILFLCNPNNPTGRLTPVEIIKKIMEEAKDKSTLVLIDESFIEFVKNYERNSMIS
                     YVMEYDNLIILRSMTKSFGLAGLRLGYLVANPNLITKINLNQIAWNVNGVAQIAGIEA
                     LNDQDHLVRAKKIIEKEKIRILKAIREKMKGLVSYNSEANFLLIKLKNKDSTWYKKEL
                     LKNYGILVRDCSSFRGMSNEFIRIAVRTPNENEFLLTALENMEANINN"
     gene            19630..20706
                     /gene="asd"
                     /locus_tag="VLA74_11585"
     CDS             19630..20706
                     /gene="asd"
                     /locus_tag="VLA74_11585"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HSF51393.1"
                     /translation="MLKVALIGSTGAVGQEFVVALANHPWFELQDIASSERSAGKNYI
                     DAIRDQNTGILKWHNKEQVPDYIKEKVVSKVDDIDPKNYDLVFTALESSDAQIIEPKM
                     AEITPVISTAAAFRYQDDVPILIPGINDEHVELLNIQKKNRQWKGFVCPLPNCTTTGL
                     AISLKPILDNFGIESIFMTSMQALSGAGRSPGVAALDIIDNVIPFIPKEEEKVQVETK
                     KILGSFTDSSISPSTVKVSCTCTRVPVLDGHTETVFVETKTPVEPEQVKQAMINFSDS
                     VKLSGLPSSPKQYIIVHDDPTRPQPRIDREINDGMTTFVGRLRKDTVFDNGVKYVLLS
                     HNEKMGSAKGAVLLAELLKSKNMI"
BASE COUNT         7087 a         3316 c         2973 g         7430 t
ORIGIN      
        1 tgaacttgat tctctattta agccacaaaa tcattttgcc tcagccattc aaatcataga
       61 aaatgtttct aatattgtct cgaaagaatt taaaaaaatg aattaatttc gtagtcatta
      121 tttacgtttc atttctatct aaagatataa agatatcatc gtaatatctt ttctaacttt
      181 tataattata gtggaaatac caaaaaatat gtagtgattt ttagttgaat ataaaattct
      241 atgttccatt aatgagtatt ctaatgttaa ccattatatt tatttcaaag ctagtgctct
      301 agataatggt agcttttatg acaacagata ttgtttttat acccatcttg ttactttaag
      361 aaaacatatt attgaaagta aactagtatt atcaaaatta aaaaagatat gatacaaaat
      421 agtttttaag tcacatgaat atattcatga agataaaaga gcagatgtgt tgtaccagag
      481 ttgtaacaac atatggtaaa taatggttac aactatgctt gcgaacgtat tacaagttgt
      541 attacgcaat gcagataaaa ataattcaat attctaatat caatctgttg aattgcgaat
      601 atgcaagaaa ttacgtgaca atatgcgact ttagctgccc tttcttctga atcccttgaa
      661 acgttttcat aaaaagatat catgtaatat tgaaaaactt tgttaaatat gtgcaagatc
      721 aattaccatc acaagaaaga atactaggac tgatgtccga atagctgcgt cattcaagtt
      781 gaatccaaat ttgatatgct gctttaaagt gtaattcata ataaaagtaa tccagtatag
      841 tcagaagatg aaataacaat aatggtatat aatgaaaatc taaatcatga atgcaataac
      901 aactaaatgt aggattaaaa tagataaaag aatcagtaca cctaattata attaatatct
      961 tgtttattaa taattaaaat ttgttatttt atattattaa agtaatatat tcaaataata
     1021 tattcaacag tatttataat attgttttga tcaatgattt attttagtca ataaaagttt
     1081 tcttatttca tcctccttct ttataccttt tataaggttt ttgtgaatta aagaaccgta
     1141 ttgcaaagct ttttttggct ttagagctgc ttcaactggt acattcaaca aaatggccac
     1201 ttctcgtaaa atatgttttc tgagtaagtc gtttgaactt gtaatctttt tatttattgg
     1261 tatttttttt gcgtattcta taaaatcaca cgataaaaag ggttgcttaa tggaaacgtt
     1321 aaattcattt gaaacctcct gtatttcctt aacaagcatt tgttcatttt ctattttttt
     1381 atccataaat ttatttattt ccacaattcc gtctgaaaat atttgtctgt atctgtcata
     1441 cccacaaaat aattcgtcga agccattagc agtgagaaca gtgttaaacc cattcgatga
     1501 agctaaaaaa gaaatataat agaaagcgac acaattttct atgtgagata aattgttaca
     1561 tggtatattc tttataattt ttttcaagac gatgataaaa ttctcgatat tgatttcata
     1621 agttatatgt ttcatactca ttttgttaga aataaattta gaaaattcaa tatcatggga
     1681 acctggaaaa cctattgaga gtaaggtaac atctttaaaa ttatctttta caatctttgc
     1741 taacaacgaa ctatctaatc cgccagaaaa agcaatagca aaattttccc ttctagccac
     1801 actaatatct attgatttta caatttcata aatgatatca agcaattatc attcaattca
     1861 agtatccttt tactctaact tttaaatata cctttttaaa ttttctgaca attttatatt
     1921 gttttttaaa tttgtttatt actcaaagaa aatattcttc tacagtattc aaggtttaaa
     1981 atagtaatta gttattatca ttaaagattt ttatataaaa tatttcgata tttaatttag
     2041 ttaagctatg actcgtaatc tcgtggaaag cgatattaaa tatatcaatc ataatggagt
     2101 acatctctca aatagaacca aattatcttt atcaaattta ttcatttttt taggaaaaga
     2161 tcatgaaatt gatgcaaaaa ttatgtcacc taataataaa atgtttatca ttgatttcaa
     2221 gattgaagac aacaagttta tacaagtaat tgattctcag gatgactttg ataaatttaa
     2281 taagattaaa gaacatttac cagatcttga tattgtagca attggttcat caaaatatgc
     2341 cggaaaatca acagaatttg aatcattatt cctgtttgat tctaaaaatt gccgtatagg
     2401 ttctattttt attgaggatc cttctttgtc ttttgattac gcccatattc tacctctagt
     2461 tacaaaatgc tccattcttc atggacatac atcaacagta atggttgaaa tcattggaaa
     2521 tatgagtaat ggcttagtta tggattttag tgaggctaaa agacttatca aagagtcaat
     2581 taatgatcta gatcataaat tttttatcaa tagacgatat ctactaaaag aagatgaaat
     2641 ctattatttt gttcagtttg agggacctcg aggatttttc aatctccaat taccaaagtc
     2701 aacggtctat cttttagaag atgaggctac cgtggaaaat ctttctaggg agataataaa
     2761 aatcctttct ccaaaaatgc ctaaaaatat cgatgcgttg ggagtttata tttacgaagg
     2821 agtcaataaa ggcgcacacc tactggccaa tctaaaatag attcgttata ccctattggt
     2881 atttcatcat tttcttcttg tgttcctttt caaatttaat atctaatttt ttagactgga
     2941 gaataatatt ccatcaaata tacatatatc gataccaacg ttaataacca cattgtaata
     3001 ttaagactaa ctaaatctga gagatggaac ctaaaatcaa tttaaaatct tggaatcata
     3061 tattagaatc aaaaattctc aaatcttggg aagacgaaga tctatataat tttaatttaa
     3121 aagaaaataa tattaaaaat atatttgtaa tagacactcc cccaccatat ccatcaggaa
     3181 gaccatggca tattggagcg gcagcacatt atgcacagat tgatatgatt gcaagaacag
     3241 cgagaatgga tggaaagatt gttatgtttc caattgggat agatcgaaat ggtcttccag
     3301 ttgaaattta cactgaaaga aaatacaagg tcaaaatgag acaaatggaa agggaaaaat
     3361 tcctagacct gtgcaagtct gcccttgatg atcttgaatc agaaatgatc aatatcatga
     3421 aaaatcttgg aattagtgct aactttaaag aatattatag gacagattcg gttgaattta
     3481 ggtctctcac tcagaaaaca tttatcgatt tgtggaataa aggtcttgta tacatttcta
     3541 atagacctaa taattattgt acagattgtg gtacaactat tgcggatgca gaaataattt
     3601 atgaagacct tccgacaaat ttagtttaca tgtatttcgg tattgaaaat agcaatactg
     3661 ataaattaat tatagcatca actcgtccag aattgctttt tgcatgtcaa gctgtcatag
     3721 ttaatcctaa agatgatcgg tattatccat tccacggaaa aaaagtaata ctgccacttt
     3781 tcaacaggaa agtaccaatt cttgttcatc actcagtaaa accagaattt ggaacaggta
     3841 tggtaatggt atgtagttac ggggatcaaa atgatgtgca agtatttaga gacttgaacc
     3901 taaaggaaat agttgcactt gatcaaaatg gttacaccac agatgaggct aagccttacc
     3961 aaaatttaat gattaataat gcaagagaaa aaatagttaa agatttaaga gaaggcggct
     4021 tcgttgaacg ggaggaaaaa gtagttcatc gtacaccact ttgtgagaga agtaagacgc
     4081 cagtgcaaat tatccctcta catgactatt atttgaagca attagaatat gtgccagtct
     4141 tgaaagccat ttcaaaaaat atttgtttct atcctgagat acataaacag atcttaaata
     4201 attggcttga cgcaatttca atagattggc caatttcaag aagaagattt tatggtactg
     4261 aaatacctgt atggttttgt aataaatgtc agactccaaa tcttcctgat tctggacagt
     4321 attatcagcc ttggaaggaa agaccgcctt tcgacagatg ttccaaatgt ggatcaacag
     4381 agtttactgg agaggaaaaa acttttgata catggatgga ctctagtatt acaccgttat
     4441 ttatttccaa attctcccga gatgagaaat tttacaagca tacttatcct tgtacaatta
     4501 gaccccaagc aaaggatatc ataagaacgt ggttatatta tactctgctt agatgttacc
     4561 aacttacgga tacattggct tggaataatg catgggttat gggttacggg gttgatgaaa
     4621 aagggaaaaa aatgagtaaa agtaaaggta atgtcattga tccttttcct gttatacagc
     4681 agtttggagc tgatacattt agattttggt ctgcaagtga aacaaattta ggtcaagatt
     4741 ttcgttgttc tgagcaaagt atatctatct ctcaaaaatt tttgtctaaa ttgtggaatt
     4801 taggaagatt tctatcctca tttccaatcc ctaaagaaat ttttgcagat atagatgtaa
     4861 aaaatatttt accaactgat aaatggatac tttcagaatt atttagactt gttgagaatt
     4921 gtagtaaggg atataatatc tttaattttt tcattccttc taatcatata cgtgacttta
     4981 cttggaatct ttttgcatcc cactatgttg agatggtcaa atcacgagtc tatgatgatt
     5041 ccgatccaac cgctcaaaat tctgcacttt atgcattaca taaatgtttt tcaaccatac
     5101 tgctattact tgcaccaatt tgccctttca ttactgaaga attatggaaa acactttatt
     5161 cttcacgaag cattcattta cagaaaagac cattgacaaa tgattttttc aaagattttg
     5221 aaaaatttac agaaaaaatc gtcgaattta actcctttgt atggaataag aaaaaagaat
     5281 ctattaatcc acatactggt aaaccggctt ccttaaaaga ccctatctca ctatccgttc
     5341 cattagagtt acaagaattc gaaaaagatc ttcagtatat gcacaatttg cataatatca
     5401 atgatattaa cgataattga atgttatttc tatttaattt atgaaattgt gaaaagaaaa
     5461 ataaagattg ataatactac attaaattaa aaacaattaa ctatctatct taccatcaat
     5521 catgtctaaa gaatcttccg cgatgtcgat tactgtatgc gaatcaatat tcggttccaa
     5581 agtaatcaaa actaccattt tatctaagta aattgtcaga atagatattt tttcacgttc
     5641 tacgtaggag aatctaacct ttcccaaggt ttcgtcaaat ctttctctca tggatcttct
     5701 aatagatgtt tgagcaagat atagttcctc gcttgtttca tctacaatag aatcaatacc
     5761 tctcctcata ccaccagcta tcaatgtccc gctctcatca actaccccgg catatcttat
     5821 gtcatcatgt aaagcaaata tcgatttaca taacttgttg taatccattg gtaagttaac
     5881 caataattct attattgaat gttcgggttg ttcttaaaaa taaataacta aaactaatga
     5941 atcagatttt atactaaagc cagcctaact tcagcttgaa tttaacatac aagaaaaaca
     6001 tatatctgaa tacaagaaaa acacgatttt tagtgatttt tctcattctg ctcaaacgat
     6061 attttacaaa cgacattgtt acttcaataa tgatatacac acatctttca cttaaagttt
     6121 accagaaatg aatttattta tttttaataa attttattta taaattttat atagaactta
     6181 tgacatcttc gttaatagat ttaacaaatt atgggccgtt aataatttct tattcctttt
     6241 aattaaatgc ttgatattaa accaaaaaaa tctacgttca tttaagataa ttcaaggaac
     6301 tgtttcaaca aacaaaattt aatagctaga acttgaaatc atcactgaca tttttagaga
     6361 tatcaagaat attttgtaga tgaaggtaat tggcttttct ctagaccttt attttgcaat
     6421 attaatgtca tttttcaaat aagtaaaaca ttatggcgtt ttatgaaaaa tatatttcta
     6481 tataatagcc atataagtat taacaaaata ctatatttat aatgtatatt ttcattaccg
     6541 ttctggcaat gccattaaat agtaatattt ccaagtttta taacaatatt atttatattt
     6601 agtcactttt attttttata atatcgtatt tataaagcta tattcatata aacattgagg
     6661 gaaaaaagat aataatttga ggtagtagat tttaggttag ctggttccaa gtctttttac
     6721 gaaaactcat attttctcga gttaactctt caaattaaac atcccagtat acaacaaaca
     6781 tgaaaaaacc aaaatgagtt gaattgaaat attgattaag tagttgcaaa atttgatcta
     6841 atattgttaa ctttgatata gtaaataatt tagcaatttt tttttaaatc taaagataat
     6901 gtttttcgcc agtatatcct atatcctgaa aaaatgaaat tatttttttg atatacttat
     6961 cctctctatt taatgaataa acataatttc ctaatttctg ttcgattacc caatttatct
     7021 gtatcaactc tgataaattt cttttaatat cttctctttt caagtgcgtt tttttgtgaa
     7081 gagcataaac cgtaaacaat ttgttttctt ccgccattgt tcttaatatt cttatttttc
     7141 ctattgttcc aaaacccgtt tccactatat cttttacaga tctatcttca ttcatcttct
     7201 aattcttctt tccatttatg atatcttcta aaattttttc tagtttatca attgatgcag
     7261 ataacaaact aatcttttta agtgaatgaa ttcttattat tttctttgta tccagttcag
     7321 tcaagacgtc ttctacatca agttttttta tcttaatttc ttcagagata tctaggacct
     7381 gcattctgat ctcttttagt tctacataat cctttttttt gattcgcaat cctctaatta
     7441 ttgctagtag tataacaatt tgttctttgg ataaatcctt aatatcctca tcggttatcc
     7501 ctttataaat ttgttcatgt actcttttaa cttggtctaa gagtattttt tttgtccctt
     7561 cattctccgc aatatttcct gcatatgtta aaagatctaa tgcgtatcta atatctccat
     7621 ttatctcaga tgaaataatt atccttgaga tccaatctat tatatctgta gaaatcacct
     7681 ctttgtggaa agcctctacc gatctttgta cgagtatatc actgacttgt tcaattgtat
     7741 atgttggaaa tccaattggt actcttccta aagaacttaa ttctgcttca tctaattttt
     7801 cataaaattc aatacttcta gcaataaata tgactccttt aacattacat ctcttattag
     7861 ggttgaattc attgagacgg gtcaagtcat aaattattcc aatatccttt gatatcttga
     7921 taagatagtc aatctcatcc aatattatta aagcataaga tgacgtatta tcgagatagt
     7981 caatcatttg tcttaacatc tcctcagcac tcaatccttg tgccggtaat tccggagcga
     8041 tacatccaag catatattta taaatcgcgt atttgttacc accttgtaat tttagattaa
     8101 tatatacaat tttcgaatta attttattat ttgctagttc ttcttttaat aaatttccaa
     8161 atctaagaag tgtagatgtc ttaccaattc cagcttgacc tattatctgt aaaattgtta
     8221 gggggtattt gtcaggatcg ttttttaaat tactaaatat tcttttgagt agatcaattt
     8281 gtttttccct gtgtggtaac tcttttggaa tatatcttgg cgaaagttta gtccgatcct
     8341 taaaaatgaa gctttcctcc atgatattaa ttattcataa tctatctagt tgttattatt
     8401 attatttctt tatcattttt agactcgatc aaaataaatt gatagtatat tggtcaattc
     8461 gttagtatct tcagatccaa catattgatt atcttaaaaa agtttatgtt ttgataattt
     8521 ctttgctttt ataaaatcta caaaatagta tagatatact ctctcattaa tttttaatat
     8581 ccatggaata aaagattcct ttttctgatt agattcattt atttcaaatc cactttcttc
     8641 tattaattct ctgaatgatc ttgcttcata ttttttttca atttctttgc ctctgttata
     8701 atcatatgga tctgtaaaaa tgacatcact atgcggtttt aataatttat gaactgataa
     8761 taataattcc tttgggttta ccaattctat taaattcatt gccaatatca ggtcaaattt
     8821 catattatga aaggggagag aacttacatc acagacacaa aattcggcat taccttgtat
     8881 atcttcctgc atcaatttac gagcttcttt tataaacgaa aacgaaagat ctactcctat
     8941 gacaaatgaa tatttttttg ctagcttgag tgtagttttt cccatcgcac atccaagatc
     9001 tagagctatt ccatcaagtt ttggatttat attactaatt acacgatcgt atagctcatt
     9061 tggatttatg ttccatctta acgatttaat taatctatcc tcgtcatgtt tttctagttg
     9121 gagccactta tatggcgagt accatattcc accatcttcg tatatgttac ttccaattgg
     9181 actggataaa tattctacag tgtttctcaa aaaatccttc atttcgtttg tttgacattc
     9241 taataaccat ttcccataca tttcagtacg attttgaata taatttggaa aattctttag
     9301 aattattgca accccttcta ttatggggta tttggaatta caatctggac atattaaaaa
     9361 accttcaata cactcttttc cctcattatc tattagattt tctatctgca atctgatttg
     9421 tttatctaaa ttatttatac atattaggtg atttgcgaaa agtctcttca atcttctgtc
     9481 taagtagtaa ttatttgaga aaaatataat tctatgttat tagaaaaata tgaagaaaaa
     9541 taattttaga ttgtaataaa aaatggaaaa attaaattta ctataaagta aatttagcta
     9601 ttttttttat ggtactacta ctattcctct tgatattcca ttcctcgttt catcggctgc
     9661 tacaatatct ggaaaggtta ttcctttgat gttcaattct atctggtaaa ttccttttga
     9721 tggaaattta atcgtctgtg aatctgatgc gttctctgca attagatttt cttttttaat
     9781 aatttgattt ccattttgat cataaaaagt taggtcatat tttatgtctc ccttaatcgc
     9841 tgaatctgcc agtgcatcag aaaaggttaa ttttaatgca ttatcttgat ttgataatac
     9901 ttcactaggc cattgaaatc ttgttagtat tcctcccctg tctgatacaa tctctggtgt
     9961 tgtttcgacg attttttctt tagctggtga taaattaaat gtcattgttt ttataccttg
    10021 gttttgaaga gattctgcta ttctcaaaat atccgctttg ttcaaaagga agtgtaatat
    10081 taagttcttt tcctctgtga atgggtcaat agcaatggcc cttccagtca aaggattacc
    10141 atttactaat gcatgaaaag aagtactatt tccaaattca ttaaatactt taggtatctt
    10201 gacttcctca tgtacgaaaa tattttgttc ttggattctc ttgagatccc aattaaaagg
    10261 cattatccat gaaatatctt tctttggtga atcataagta aaattctgta tttgatcata
    10321 ataagatatt atggaaatat tgtagttctt gtcaccttcc ttaatattgt ccttatagat
    10381 gtcgccgaca cttaggtaag agtcaaacct aggtgcagtt tcaggagtga aaatatttct
    10441 atcgttatct attccaaata tttctattgc aaagtgatat aatcctcctt ccaacaatat
    10501 ggggccgctt acagagatat ctccggtttc acttgtccaa ccgccaagaa aaggttctgt
    10561 tgaaccaaat atatttataa aattcccttc ttgtgggtct atttttagct ttaaaggtcc
    10621 ttgatgtgag tgaaacaggt ccctcattat caattttcca tctttttcta cagcaataaa
    10681 atacgatata tgttctatgt ttttgtcagt cttcgcatca aataatttta attcaaaaaa
    10741 agcattttcc ttgctttcag atgttagaat aggtggactg atttttgtat ataaacttgc
    10801 ttccctgtct ccgaccgatg caggaggtaa tttttcttcg aatagcccat ctgcaacaac
    10861 actctgaata ggactgaaca taaaaaatac aactacgaat aaaactgtta ataactgaac
    10921 ataaagaaaa ttttttaaca tctaaacgtg tgaatacttt cccagttttt aaaaatcttt
    10981 cttttataaa ccacattatt gaatagataa aaatttttca cattcataaa tcaatctgga
    11041 aaccacaaca tgtgcttcta gactatattt agatatcgaa tatattttat ccattctatc
    11101 aataacttct tgggaaagat gtccactctg aaatcctcca attacaaaaa cgtaatgggc
    11161 atcatctttt tttaagtttt cagttaaaat ggtcttgata tcttgatatt ttccaaatgt
    11221 agaaaagcct ataattttgt caggtttcac aatttttcct attaattcac taaaagtcat
    11281 atccttgacc tgtaatagaa tctccctgtc ggaatttgag gataatatct ccttctcaat
    11341 gaacagctgc atcatcaatc cctcaaatct tttataagat tttggaatcc ttaaattctc
    11401 ccctatcagg attactttat tatcaattgt gtgaatataa actcctacta agctattata
    11461 aaataaaggc gtggaaagta tacataataa acataaatgg acaatatcag gacgtccacg
    11521 tttccatctt gattcaattc ctcccttttc catagcagaa tagtgataat ttatatctag
    11581 caaaatttct tttacacgtc ttttcatctt tttcgcatga tttttaacag caataatatt
    11641 ttgtaagttt tttgggatgg tttcaatcgc tgcctcggca attattatcg ataaccgcaa
    11701 tttaataatc actagttgta gctgtttata atttggttgt gattcggtac aaaaaattaa
    11761 aattatttat tttttaatcg attttcttac atttcaaaga aaggtatttt tatctaaaca
    11821 attcactttg atacctagtt tggtaaaaag tgaggctaaa ttagttgcat acgaacggat
    11881 atctatatta atccacagtg ctcttagtga gaaacaccaa aattatgagc tagcaaacaa
    11941 acaagcacaa cttgcaaaaa aaattgcaaa aagacttaga ttaaaacttc catataatct
    12001 tcgccaattt tattgcaaga aatgtaaaaa ttttatttca ccaggttaca attccagagt
    12061 acgaataggg cgatctaatg tcaaagcaat aagaattact tgtctaaagt gtaactatgt
    12121 atacagaaaa ttattttaac acattatgga cagagaataa ggttttataa gggttctaga
    12181 gatattctga tgttataatg gctaaagttt atgatgtgcc agctgataaa tttatagaaa
    12241 aattagctgg atatttaaaa aatgataaaa aaattgaacc tccatcttgg tcctattttg
    12301 taaaaactgg gcctcatact gaaaaaattc ctcaaaataa agattggtgg tacaccagat
    12361 gtgcttctct cttaagaaag gtctacattc atggaccagt ttctgtagcg gatctcaaag
    12421 gtgaatacgg tggcaagaaa caaagaggat ataatttggc acatcatgta gatgctagtg
    12481 gtggaataat tcgtactggt ttaaaacaac ttgagagttc tggttacata gtaaaaaaag
    12541 ataagggcag aataatttct gaagatggaa tgaagagagt ggatagactt gcaactgaac
    12601 ttcataaaga acttcaaaaa gattttcccg agttaggcag gtattcctga acttgatgaa
    12661 acatgtcact cccacaaaat aataatccaa gcgaagaaga gcgtaaaaga gaagcagaag
    12721 cacaagcaat gcgtcaaaag gttatgacgg tacttttgga tgcatctgcg agacaaagat
    12781 tagccaatgt taggatggtc aaaccggaac tagcaaatgc cgttgaaaat tatctggtaa
    12841 atgcggcctc ctctggtagg ttgaatcgtg cattgactga tgacgagcta aaacaaattt
    12901 tattgagcat tcaaagtccc aagaaagatt ttaaaattaa tcgaatctag tatcaccaaa
    12961 caggattaca taatattgat ttgtgaatcc gttgtactat gtaagtacca taacaacagg
    13021 ctaaattttc attattctga ttaaattgtt agacgacttt ctacatccta aactcctgct
    13081 gaaggtcatt tcacatattg aagctggaag atatcactta aaggagtttc aaaatacact
    13141 cgaactagac aatgattcta tatttcaagc tattgtaaaa tatctgctaa acaacaatat
    13201 agggcaatta tctgaaaaag ataagacaat atctttttct cgttctgata aaattctgat
    13261 tactctgatt gctattagga ggggttgtga gatacaagaa tgttcgagat tactctcatg
    13321 gcaagatttt gaatccttga cttccgagat attgggccat tttgagtacg ttaccaacgt
    13381 taatatctta ctaacaaaac cacgatgtca attagacgta atagctataa aaaaagactt
    13441 tctaatttct attgattgta agcattggaa aaattatagc aaatccgcta ttatgccata
    13501 tgttgataaa caaataatac gtactaaaaa ttatttacgc aataataaaa aaataaaaaa
    13561 ggccctccct atgcttttga cgttatacga ttcaaatttt agatttatca atggtatacc
    13621 gattgttcct ataagctttt ttaaatcatt tatatttgaa ttcgaatctt ttaatgacaa
    13681 tatagcgtat atatcaagat aagtaagatt ttaaatacaa ctcggtttta attaaaaaat
    13741 tcaatcgcta aaaatagaca aacaaaaaga aaaatgggta atcttcactt tatttctatt
    13801 tatgttgggc gccttagacc agatgctatc acgtatgcca atcctactgc taatccaaaa
    13861 gctaatggaa tccacacccc gaaagtatct aaattaatag gaacattcag ctgctgtatt
    13921 aaattaccaa atatatccat tttcttccta tgataagagg aaggttgctt ataagcgttt
    13981 aaaaaattta gcgttttttg taaacggaaa attttggtga attcctaaaa tagtgttttg
    14041 acagtttgtt ttctttatta ttatcctttg gtgatcgcta aaagcatctc gccagcagtt
    14101 ttccttaaat aaccctaata tcaaaaaatt tacatgaaga tgcaaaagga gatgcgaaaa
    14161 ttctgtccca agtgtaagac gcataccgct caatctgttt cattatataa gaaaggaaaa
    14221 gatagaaaga ctgctttggg ggccagaagg catgcagaag acaaaaaggg atacggcggt
    14281 caaaaatttc ctgaattgaa acgtacagca aaaacaacta agaaaattac ccttaagtac
    14341 acatgtaaaa cctgtcaaag aaaatccatg agagaaggga tgagaatgcg aaaattagaa
    14401 attagtgcct aaattagcta ttggtaataa aaaatgaata aagagaatat cttgattccg
    14461 caaccattga gtgagtatct cactgttcag tgcacaaagt gcaatgataa aataattatc
    14521 tattcccata cgtcaaagaa tatttactgc aaaacatgca atgaattatt agctcaaaaa
    14581 tctggcggaa aagcaaagat atttggaaat ataattgcga atctggatta gtaactatta
    14641 tactttgtag tatttcttat tttcacactc taaaactaca aaatgaagtt aatagacatt
    14701 attacatttg taatatcaat tcttactttt gatatgaaga attttgcata gatttcaatt
    14761 ggaaatggcg atatgaaatt tgttgaggaa gcaataaacg acatgaaaat aatgatcaca
    14821 tcctgttttt tggaacatca agttcttatt ataacaaata attctggaat aaaataagat
    14881 tctacgagag tattgtttta gttttcattc ctaatacact gggatattaa atttgaaaag
    14941 taacaaagtg tcagagataa caatcaagta catccataaa attaccagat ccaaactaat
    15001 gttaagatca tattacttgt tcattgactt ttagtgcctg ccttatgtag ttaaaatatt
    15061 tcatatttgc attattcttt tggctttctc aagatcggat ttttcattta cattaactgc
    15121 tatccctttt tgatttagta ctatgaatct ctctggaatc tcatgtttaa agtcatatat
    15181 tttacttggg ttaaagattt caattccaga ataacaatac tctttaaatt cataggtaaa
    15241 ggaaacactt ggctttattc ctaaaccttc gacaaattct ttttctatta taatggaatt
    15301 gcatggagat cgaaaatcgc atgattttaa aatctcattt atttcatctt ttgataataa
    15361 cggcaggtct gcagatacga caaaaatcat gtcgttagga aattttttaa ggattgaaat
    15421 cagatctagg gaatagctat ctccatctgt ttcaacaaat tccaggtcat caataatttt
    15481 tcttttaatt ttttttaaga gaaatgattt agttctgact gtgtttttac tgctacagat
    15541 aacaattttt agaaagcgtt tggtatttat caaattatca atcatatatt ctatcattct
    15601 tttatttccc agttttatca taggtttgtc agtccgataa ttttttttca ttctagtacc
    15661 ttttccacca cacattatta cggcaataat attcaccttt tttttagaca ttattatgtc
    15721 gatcccataa taacaacatt aataaagtaa ataaacaatc ttgataattc attacaagct
    15781 cctatcacat ctccagatat tccctcgaaa gatctattag aaattaataa gagaagtaaa
    15841 cttacaagta acattccagt aagtgatagt gctacttggt agactcctag tccaaaaatg
    15901 attagtatta taaccatcac gattgttgat acgataaact tttttttgtt cttcatctca
    15961 gtaataaata ttgtattcat tccctcccat gctgatttac ctatgtaaca ttgtaagacc
    16021 atgctatact tagaaagagt ttcagcaatt ataatcaaag aaaataattc aaatttgtta
    16081 ttaatattag atactaaaat aataattcct actatgtaga taataagtat tacagttcca
    16141 gcagttccat ttcctggatc tgtcatcacc ttatgtttta tatctttaga tcctcttacc
    16201 atcaatccgt ctgctaggtc tgcaagtgcg tctgtgtggt gtaatcccgt aaatgcaatt
    16261 aaagcgattg ttaccatcat cccaagcatt aaatcttgca aatggtcata caggatgaaa
    16321 gctaaagatc ctacactaag tcctattatg aatccagcaa ttgggaataa atacatattt
    16381 tttgctatat agctaatatc aaaacctttt cttttcgtta ccggtataat ggttaaaaaa
    16441 gataaaattg aaaatatatt atcaaatggc aaatactata gaccaccatt tcaaaaggcc
    16501 taataatagt atggttggaa tagagattaa tagacaaaat agaattgttg tcatcttcat
    16561 tatttttatt gcaagtatgc atttttgaat agatagtatc tcctcaggat tgcctaatgc
    16621 ataatgatct attttttcta atcttatctt caatgctcct gccattgcag acattggata
    16681 gccagagttt acactaattg aacaattacg atcacgcatt agaattttaa tagaattttt
    16741 ccaatcagcc cttgctataa tcgatgaaat tatcattagc aaagatgtta ttctggctgg
    16801 aatataattt gcaaatgtat cagctttggc agccatccat ccaatattaa caaaataatt
    16861 gtttctatat ccaatcatcg aatccaatgt attaattatt ctgaacacaa aggctccagt
    16921 tggaccaaaa aaagaaaaat aaaataaagg cgatattata ccatctactg tactatctgc
    16981 tatagattct attgccgccg atagaatatg ttgttcatcc agtttttggg tatctctgcc
    17041 tacaatgaaa gacagtttaa gacgtgcatt atcaatatca tttctcttca aggagttgat
    17101 aatgttgtca acatgtttgt ccatattttt tatggcaatt gtactgtaaa gtagataaat
    17161 tgatagtata aaaaacataa agaaataaat atttttcaaa taaattaaaa atacctgaac
    17221 gagcaatgca gataccacta taaaagatat tgtgaaaact actcctctga tcttctcttc
    17281 atactggttt tcttttttag taatctttaa ttttgggata aaatatttta ctattttacc
    17341 gatccatgag acaggatgaa acctattact cggatcacca aacgccagat ctagagttat
    17401 tgaaaggatt aggatgaaga taatatctat tgatgatatc atctggttaa tttcaaaacc
    17461 ttatctaaga taaattcgat ttcaatattt tttctgacct cttttgataa tatgtctatt
    17521 tgttggtcta atatttcttt tgaatatgtg aaatgttcgc tgttattatt atcatcattg
    17581 gtagggtgtg ttttactttt ggtaccgtct aatgagtctt cctcaggtaa agaaaaatca
    17641 atttttggaa taattccgag acatttcata tttcttactg attgtacatg ttttattgca
    17701 tttttaagta aacctttatt accacgaaat ttatttatta aaaatccttt cactaatttt
    17761 tgatgttttc tttgtaatag ttccatagtt cctacaaggc ttgcaaaaca acctcctctt
    17821 tcgatgtctg atatcagtag aacgggactt ttcgtttttt cagctagcaa catattagct
    17881 atatcatact ttgctatgtt aatttcggca ggagacccag ctccttctac aattaatata
    17941 tcattatctt ttctcaaagt ctttattgat tccaagacca tcgggaagcc agtctgtaag
    18001 acaaaatctt tataatattt agaagcagtc atttctgcat aaaattttcc tttaataaag
    18061 accctgcttc tataattccc tacgggtatc aacaaaattg ggttaatttt ccaactaggt
    18121 ttatttctcg cagcaattgc ttgtactgcc tgaatatttg atattacctc cgacttagaa
    18181 atattgaaaa tttttgacga catgttctgt gccttgaatg gacaaacacg aaaccctaga
    18241 tcagacaaaa ttctgcacaa tgcaataact aatgtacttt ttcctgcgcc agaagaagtg
    18301 ccctgaacca tcaatatttt tgcgtgttcc aaatcgtttt ttaccttcta tctgtgcaca
    18361 ttttaatcat aatactgagc cattaattat taatatttgc ctccatgttt tctaaagcag
    18421 ttaagagaaa ttcattttcg ttaggagttc ttactgcaat tctaataaac tcatttgaca
    18481 ttcccctaaa actgctacag tcacgaacca agataccata atttttcaac aattcttttt
    18541 tgtaccatgt agaatcctta ttttttaact tgatcaataa aaaattagct tctgaattat
    18601 atgacaccaa acccttcatt ttttctctta ttgctttcaa gatccgaatt ttctcttttt
    18661 ctattatttt tttagctctc actaagtgat cttgatcatt aagtgcttct attcctgcaa
    18721 tttgagctac accatttaca ttccatgcaa tttgattcaa atttattttt gttattaaat
    18781 taggatttgc aactaaataa cctagtctca aaccagctaa accaaatgac tttgtcatag
    18841 atcttaatat tattagatta tcatattcca tcacgtatga aatcattgaa ttcctttcat
    18901 aattttttac aaattctata aaactttcat caattaatac taatgttgac ttgtcctttg
    18961 cctcttccat aatttttttg attatttcta ctggcgttaa tctaccagtt gggttattag
    19021 gattgcaaag gaataagatg ctgttgtttc ttttttttag ttttttgatc ataagatcgt
    19081 tatcaatttg aaaattttct agtggatcaa tgaaatcaat ttttaaaccc attcttctaa
    19141 ctgccaattc atattcgcaa aatgtaggaa tcggaatcaa tgctctataa ggaaatgatc
    19201 taacaaattg atgtattagt tccgtagctc catttccaac tgtaatgcat tcaggaagga
    19261 tattataatc taaatatttt gaaattcttc ttctcaattc cctacatttg ggatctggat
    19321 atgtgattga aacatttcta atattctgcg atattgtgct taatactttt ctcgaaattc
    19381 caagaggatt aatatttgaa ctgaaatcta ttcttatttc ctgattatta tctgtggagt
    19441 ataatcctcc atgagtacat gaatctaatc ttttaaattc agtttgatta tttatataag
    19501 aattctcttg accataattg gactctatca aatctctgat gaacaagatt gatatttcca
    19561 atcatgtaaa tacttttttt ggttgaataa cgattattag atcgttatta tttatttaat
    19621 tgctgtaata tgttaaaagt agcgttaata ggctctaccg gtgcagttgg acaagaattt
    19681 gtagtagcac ttgcaaacca tccttggttt gaattacagg atatagcctc atcagaaaga
    19741 tcagcgggaa aaaactatat cgatgccatt agagaccaaa acacaggtat attaaaatgg
    19801 cataacaaag aacaggttcc agattatatt aaagagaaag ttgtaagtaa ggttgatgac
    19861 atagatccta aaaattatga tcttgttttt actgcgttag aatcatctga cgcacaaata
    19921 attgagccaa aaatggctga aataacaccg gttataagta cagctgctgc tttcagatat
    19981 caagacgatg ttccaatatt gattccaggt ataaatgatg aacatgtaga attattgaat
    20041 attcaaaaga aaaacagaca atggaaaggg tttgtgtgtc cgctacctaa ttgtacaact
    20101 accggtttgg caatttctct gaaacctata ttggacaatt ttggcatcga aagtattttt
    20161 atgacttcaa tgcaagctct ttctggagct ggaaggtctc ctggagttgc tgctttagat
    20221 ataatagaca atgttatacc atttattcca aaagaagaag aaaaggtgca agtagaaacc
    20281 aaaaagattc taggatcctt tacagatagt tctatatctc cttcaacagt taaggttagt
    20341 tgtacttgta ctagagtacc tgttttagat ggccatacag aaacagtatt tgtggaaaca
    20401 aaaactcctg ttgagccaga acaagtaaaa caagcaatga tcaatttttc agattctgtc
    20461 aaacttagcg gattaccgtc atcgccaaag caatacataa tagttcatga tgaccctact
    20521 agacctcaac ccagaatcga tagggaaatc aatgatggaa tgactacatt tgttggaaga
    20581 ttacgaaaag atactgtatt tgacaatggg gttaagtatg tccttttatc tcacaatgaa
    20641 aagatgggtt ccgcaaaagg tgcagtactc ttagctgaat tgctaaaatc taagaatatg
    20701 atatagaatt atggacattt ccttaatttt aagatataaa tatcaaaaca tagaatcagt
    20761 tatgacataa cacgagttga gagttaaact gtgattcgac aagtaa
//
LOCUS       DATIAS010000572         4110 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_647719, whole genome shotgun sequence.
ACCESSION   DATIAS010000572 DATIAS010000000
VERSION     DATIAS010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647719"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..249
                     /locus_tag="VLA74_11590"
     CDS             37..249
                     /locus_tag="VLA74_11590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51394.1"
                     /translation="MSHIIDTNKWREESLKGLVCAKFQCYNKPRNQCSKFSIYYCNYH
                     ITSHIHTDTAKKLQKEKGDIDKTKFR"
     gene            complement(513..2060)
                     /locus_tag="VLA74_11595"
     CDS             complement(513..2060)
                     /locus_tag="VLA74_11595"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF51395.1"
                     /translation="MEEEKERGQKEKEKHNTTKTTAVIYSSRSAQFILVLLSSTLLVV
                     MFSETMLLPAIPEIMQDFKIPYSTAAWIFSAYLIVAAVMTPIAGKLSDIYGSKKVLLT
                     LLVLYIVGVIAGGFSENISFLLASRVIQGLGLAAVPVAFSIIRDSFPTEKLSMPVGVF
                     SSAASGGSVVGLLVGASLIQNFGWNATFFFIAPAAVIVTFMIARFVPTDSNPENLQLN
                     GMDNNTSISKDAVTKDRKSMIDIKGAIALSATITSFLIALTFIENSNSLENSMEIAGI
                     SFITSAVSLILFIFIEKRTKTPLIELWLLKQRILLPSYIMMIITGTTIFLVYPTIVQL
                     VRSPLPAGFGGDAVYAAYVQLPFMVIFLIFSSTTSYIISKLGKVMPTVLGGSISIAGT
                     IGLLMLHSTGFFVSINLTIIAIGLALTMTAIWNLIVSSAPKEFMGISTGIGALFSFIG
                     MAIGPALAGTYMHTFHMSIEGTVGLLPSPDSFNMIFLTAAVLSSMSLTFSLLLRRRMS
                     KNIKTIT"
     gene            2708..2947
                     /locus_tag="VLA74_11600"
     CDS             2708..2947
                     /locus_tag="VLA74_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51396.1"
                     /translation="MSNDPNPDFSTNIIKREAKGFENTDLGEVQEVSREYIITQKGTL
                     NKEKFYIPKNLVDRFDGTTVYFKLTEEEAKQYKKD"
     gene            complement(3243..3608)
                     /locus_tag="VLA74_11605"
     CDS             complement(3243..3608)
                     /locus_tag="VLA74_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51397.1"
                     /translation="MNFDLLEKYSYEWKHSRDSQLEKKIIDIICNTNNNFNFPISEDC
                     TISKGKVGFTYKNNKTFPNFFEFLSYITKHPIPIEVNNCHFGPGEIVVIKDNKEDALG
                     DLIQSTHKIVNQVKTQMKE"
     gene            3764..>4110
                     /locus_tag="VLA74_11610"
     CDS             3764..>4110
                     /locus_tag="VLA74_11610"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSF51398.1"
                     /translation="MNVKSIFNDSIKSNQGTLVIINPKAASGNNESNIGIFSTLLKKQ
                     IGEKIKIIITKKSGDATKYTRQYLKKNFKKIIAIGGDGTLNEVANGFFEDSIKSSLNS
                     KDFHKLIPISAEA"
BASE COUNT         1536 a          595 c          580 g         1399 t
ORIGIN      
        1 aagttaaata tcttatattg acaaaatatc cttcatatga gtcatattat cgatactaat
       61 aaatggagag aagaatcgtt aaaagggtta gtttgtgcaa aatttcaatg ctataacaaa
      121 cccagaaatc aatgttctaa attttcaatt tattattgca attatcatat aacatctcat
      181 attcatactg ataccgccaa gaagttacaa aaggaaaaag gtgatattga taaaacaaaa
      241 tttagatgag atagatatct atttttttct gcttaaagtt ttaagccatt aatttcgatt
      301 tgtgcctcaa ttctagatat aattaagtta tttgggagtg ataagaaatt ggtatctact
      361 caaagcaagg aaaacataat cataataaga atcccatata gttaatggtt cacactgata
      421 ttggcttaat tctcattcag aaaatctcaa tcttaataca tctccatcgt taatttcggc
      481 ttctatatta atcatcttgg aaattgatat gtttacgtta tcgtttttat attttttgac
      541 atccttctcc ttaacaataa agaaaaagtc aacgacatag atgacagcac agcagctgta
      601 agaaagatca tattgaatga gtctggagat ggaagtaaac caactgtacc ttctatcgac
      661 atatgaaatg tatgcatgta tgttccagcc aaggcagggc ctatagccat tcctatgaat
      721 gaaaaaagtg ctcctattcc tgtagatatt cccataaact cctttggagc tgaggataca
      781 attaagttcc aaattgcagt cattgttagc gctagtccga tagcaattat tgtaaggttt
      841 atcgatacaa agaatcctgt agagtggagc atcaaaagac caatcgttcc tgcaatgctg
      901 attgaacctc ctaacactgt aggcattact tttcctagtt tagatataat ataggatgtt
      961 gtactagaaa atattaaaaa tattaccatg aacggaagct ggacataagc tgcatataca
     1021 gcatcgccac caaatcctgc tggtagagga ctccttacta attgtactat ggtaggatat
     1081 acaagaaata ttgtagtccc agtaataatc atcataatat aagatggcag taagatcctt
     1141 tgctttaaca accacaattc aatcaaaggt gttttcgttc ttttttctat aaagatgaaa
     1201 agaattaaag aaacggctga tgttataaaa gaaattcctg caatctccat cgaattttct
     1261 aacgaattac tattttctat gaatgttagt gcaatcaaga aagatgttat cgtagctgaa
     1321 agtgctatag cacctttgat atctatcata gattttctat ctttagtgac ggcatctttg
     1381 ctgatactag tattgttatc cattccattt aattgtagat tttcagggtt ggaatcagta
     1441 gggacaaatc ttgcaatcat aaaagttaca atcactgctg ctggagctat aaagaagaat
     1501 gtagcattcc atccaaaatt ctgtattaaa ctagcaccta cgagtaatcc tacaacagat
     1561 ccacccgacg ctgcagaact gaagacacct acaggcatag aaagtttctc tgtgggaaac
     1621 gaatctctta taatactaaa cgctacagga actgcagcta agcctaaacc ctggattact
     1681 ctactagcga gaagaaaaga tatgttttcg gagaatcctc ctgcaataac acccactata
     1741 tacaatacaa gcaaggtaag cagtactttc ttgcttccat agatatctga aagtttacct
     1801 gcaataggtg tcataacagc agctacaatg agatatgcac tgaatatcca agctgcagta
     1861 ctgtatggta ttttaaaatc ttgcattatc tcaggaattg ctggcagtag catagtttct
     1921 gagaacatta ccaccaaaag agtactacta agtaaaacta gaatgaattg agctgaacga
     1981 ctactataga ttactgctgt tgtttttgtt gtattatgct tttctttctc tttttgccct
     2041 ctttcctttt cctcttccat ctcagaaact tcaatttaag aatatataaa ttctgaagtt
     2101 tacaaattat actaattata ttatttaatt atttttaata cattagtcaa attatttttc
     2161 ttatttttag gttttattct ccatttcttc agcaacaata ggaaaaagac atagaagttt
     2221 aattatgtat ttgttattat caaataattt ctgaagatat aatattatga attatttgac
     2281 ctgttattat atatatataa actatttatc ttatctctca ttctctatta ttatttcaga
     2341 ataacttcga aatagaaaaa tctctttgta gaataagtaa aattttctag atgaaatact
     2401 ttataattca tgaaaaatga gagaatatag gtaaaaagat tagaaaatac agaagatgta
     2461 tagaaataag gataagaaga attaattaaa tatatcagcg attgccgagg tcatttattg
     2521 gatatattgt attggatggg ccaatattta agtttggtta tcaaatcagc ctcacaggtt
     2581 tgaataacaa atttgttatt agtctaaact acactaaaca aattattgta atcaatgatt
     2641 aattaagtca atactttaaa ttataaaatg caaaaaaagt taaataaaat gtattacttg
     2701 ttattatatg tcaaatgatc ctaatcctga cttttcaaca aatattatca aaagagaagc
     2761 aaaaggattc gaaaatactg acttgggaga agtacaagag gtttcaagag aatatattat
     2821 tactcaaaaa ggcactctca acaaggagaa attctatatt cctaagaatt tagttgaccg
     2881 ttttgatgga actactgttt attttaagtt aactgaagaa gaagcaaaac aatataaaaa
     2941 agattaatgc ttttctaaat tttttataat ttaaaatttt aatgacttta ataataataa
     3001 gctgaaagaa aacctactga taaaaactag attcaaagat ttgttgaata tatgtcctac
     3061 ttgatataat ctatattttt ataaatacaa aaacttgtaa caaatttaaa ataatattct
     3121 ttgttgttat aataaaatta attcttataa tttaagaata ttataacaaa atttaagaaa
     3181 aggataaaaa tagtggtgac ttgttttaat aaattagtac aatctatata aaaaataact
     3241 atttattctt tcatttgagt tttgacctga ttaacaattt tatgagttga ctgaatcaaa
     3301 tcacctaatg catcttcttt attatcttta attacaacaa tttctcctgg accaaaatga
     3361 caattattta cttcgatggg tataggatgc ttagtaatgt aagaaaggaa ttcaaaaaaa
     3421 ttaggaaatg ttttattatt tttatatgta aaaccaactt tacctttgct aattgtacaa
     3481 tcttctgata ttggaaaatt aaaattatta ttggtgttac aaataatgtc aataattttt
     3541 ttttcaagtt gcgaatctct agagtgtttc cattcataag aatatttttc caataaatca
     3601 aaattcatat actattcgat attagagcaa atattaaaat tgatctttaa taaatattaa
     3661 aaatatacga tgcaatcgaa atgttcaaaa ttaattatta attaaatttt tatataaatt
     3721 atattcatag ctactataac taatttctca tcaatataaa taattgaatg taaaaagtat
     3781 ttttaatgat tctatcaaat caaatcaagg cacattagta attataaatc ctaaagctgc
     3841 cagtggcaac aatgagagta atataggtat tttttctact ttactaaaaa agcagattgg
     3901 ggaaaaaatt aagataataa ttactaaaaa atcaggtgat gctactaagt acactagaca
     3961 atacctcaag aaaaacttta aaaaaattat agcaattgga ggggatggaa ctctaaatga
     4021 agtagctaac ggcttttttg aagattctat caaatcttca ctcaattcaa aggattttca
     4081 taaactaatc cctatttctg cagaagcaat
//
LOCUS       DATIAS010000573         2498 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_783826, whole genome shotgun sequence.
ACCESSION   DATIAS010000573 DATIAS010000000
VERSION     DATIAS010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783826"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VLA74_11615"
     CDS             complement(<1..219)
                     /locus_tag="VLA74_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S26e"
                     /protein_id="HSF51399.1"
                     /translation="MPKKRTSRGRTKGGKGSSGTVHCSQCGAMVPRDKAKKITGRVTL
                     VEPTLAKELRAQGAYISPATDVKFYCVSC"
     gene            416..1420
                     /locus_tag="VLA74_11620"
     CDS             416..1420
                     /locus_tag="VLA74_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HSF51400.1"
                     /translation="MKIALVGAHPQDTLLISKIKKTLDNSYIQTISMSEKNYNLANQV
                     DLVFIVGGDRAMLDYFHKVVNDSAPAIGIYESESTGFLAQIDVRELETNIQRLKKNDY
                     RIDEVVRLAVNVDGKEMEPVLNDVAVFPSKSATLMEHILRIDRNDVWHDNSDGVIIST
                     PIGSTAYSMSAGGPMILQNSRVFVVVSVNSVDNTRRPLIFPDNCILEISDILSRYHCE
                     VVLDGGRRLGIKKVLKCSKHQYPAKLVRLVGDDSATSIIAKKVKIAEELLNMPPSAKL
                     ILKILEYEGSMSQKDLASKTLLPERTIRLSLGHLVNRGYVKKKTSLRDARHRIYELKI
                     "
     gene            complement(1410..>2498)
                     /locus_tag="VLA74_11625"
     CDS             complement(1410..>2498)
                     /locus_tag="VLA74_11625"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HSF51401.1"
                     /translation="VHVTLAPILDVVGEQKTKPTQHSVQELRRIGINPDIIAIRCKNI
                     LSTDARRKVSLFANINSNCVLSCHDVKSIFLVPEILANQGIISIIENKLKLHNLFIKW
                     SNWKGISKSFLEYNKVVNIAVVGKYVSLPDSYVSVYQALSHAAAKLRNKLEVTWIDSE
                     KFDITSKQKLSLLEKYEGILIPGGFGKRGSEGIINVANFAREANIPFLGICFGFQLSL
                     VSFARNVCRICDANSTEIDPTTNDPVVEFMPEQKEINNLGGTMRLGRHKISVNSHTLA
                     SKIYLQNFINKRHRHRYEFNKRYLSVLHKNGMILSGYSDNGKRTEILEIPNHKFYFAF
                     QYHAEFDSRPGKPEQAFESFMKIASIKS"
BASE COUNT          875 a          374 c          398 g          851 t
ORIGIN      
        1 acaagaaaca caataaaatt taacatcagt tgctggagaa atatatgctc cttgagctct
       61 caattcttta gctagagtag gttcaacgag agttactctt ccagttattt tttttgcttt
      121 atctctggga accatagcac cgcattgact gcaatgaact gttccagagc taccttttcc
      181 tcctttcgta cgaccgcgac tagtacgttt ctttggcata taattatgat tctgattcca
      241 tactttaaag gttctggtaa aatcagctat tataattaag tcaattaatc aatttttcaa
      301 cattaaaagt aaaattatta aacaaaaata aaagattttt tttgatataa tgcattgtat
      361 tataataaat aataacagaa aaactttaag agattatatt actacaaaga agataatgaa
      421 aattgcactg gttggtgctc atcctcaaga taccttacta atttccaaaa ttaaaaaaac
      481 tcttgataat tcctatattc aaactatcag tatgtctgaa aaaaattaca atctagcaaa
      541 tcaggtggat ttagtcttta ttgttggagg agatagggca atgttagatt attttcataa
      601 agtagtgaat gattctgctc cagctatagg aatatatgaa tccgaatcta ctggattttt
      661 agctcaaata gatgtacggg aattagaaac aaatattcaa agactaaaaa aaaatgatta
      721 tagaattgac gaggttgtta gattagcagt aaatgtagat ggaaaagaaa tggagccagt
      781 attgaatgat gttgcagtat ttccaagtaa aagtgctaca ttaatggaac atatattgag
      841 aattgataga aatgacgttt ggcatgacaa tagtgatgga gtgataatat caactcctat
      901 tggatctaca gcctattcga tgtccgcagg aggaccaatg atactgcaga attcgagagt
      961 atttgtagta gtatctgtaa attctgtaga taatactaga agaccattga tattcccaga
     1021 taactgtata ttggaaattt cagacattct aagtagatat cactgtgaag tagttttaga
     1081 tggtggaaga agactaggta ttaaaaaagt tctaaaatgt agtaaacatc aatatccagc
     1141 aaaattagta aggttggtag gagacgattc tgctacttcg ataattgcta agaaagtaaa
     1201 aattgctgaa gaattattaa atatgccacc cagtgcgaag ctaattttaa aaatattaga
     1261 atatgaagga tcaatgagcc agaaagattt agctagtaag acattattac cagaaagaac
     1321 aattagatta tctttaggtc atctcgttaa tagaggatat gtaaaaaaga aaacatcatt
     1381 acgtgatgca agacatagaa tctatgagct caagatttaa tcgacgcaat cttcataaat
     1441 gattcgaatg cttgttctgg ctttccggga cgactatcaa attctgcatg atattgaaat
     1501 gcaaaataaa atttatgatt agggatctct aaaatttctg tcctttttcc attgtctgaa
     1561 tatccagata atatcattcc atttttatgt aaaacagata agtatctttt attaaattca
     1621 tatctatgcc tatgtctttt attaataaaa ttttgtaagt atatttttga cgcaagtgta
     1681 tgtgaattta ctgatatttt atgacgacca agtctcatag ttccgcctaa attatttatc
     1741 tccttttgtt caggcataaa ttctactact ggatcattgg ttgttggatc tatttcagta
     1801 gaattagcat cacatattct gcaaacattt cgtgcaaatg aaacaagaga taactgaaat
     1861 ccaaagcata ttccaagaaa aggaatattt gcttctcttg caaaattggc cacgttgatt
     1921 atgccttcag aaccacgttt tccaaatcct ccgggaataa gaataccttc atatttctca
     1981 agtaatgaaa gtttttgttt agaagtaatg tcaaattttt cagaatcaat ccatgttact
     2041 tccaatttat ttcttagctt agctgctgca tgagagagag cctgataaac acttacatag
     2101 ctatcaggaa gagaaacata tttaccaacg actgcaatat ttactacttt attatattct
     2161 aaaaatgatt ttgatatgcc tttccagttt gaccatttta taaataaatt gtgtaatttc
     2221 aatttattct ctattatact aatgattcct tgatttgcca aaatttcagg taccaaaaaa
     2281 atagatttta catcatgaca agacaacaca caatttgaat ttatgtttgc aaaaagtgat
     2341 acttttcttc ttgcatcagt agataaaata tttttacatc ttatcgctat tatatctgga
     2401 ttaatgccta ttcttctaag ttcttgtaca ctatgttgtg taggtttagt tttttgttct
     2461 cctactacat ccaagattgg tgctaatgtt acatgaac
//
LOCUS       DATIAS010000574         3906 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_648092, whole genome shotgun sequence.
ACCESSION   DATIAS010000574 DATIAS010000000
VERSION     DATIAS010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3906
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648092"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VLA74_11630"
     CDS             <1..473
                     /locus_tag="VLA74_11630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51402.1"
                     /translation="VNSPAPTLVSGNVITNIQTSPTDWTAQRGSGSTLLDSITAYVIC
                     FNNPTTLTSSTIAGQESSVNDSPVQFSNSTDSSQESKIKSTDSSQESKISSQNTEQNK
                     NVEKTSNNNDQIQTSNTQSNEQQMKALNQNVEQNNNVVEQKKSTSLPLFNFNHQ"
     gene            671..838
                     /locus_tag="VLA74_11635"
     CDS             671..838
                     /locus_tag="VLA74_11635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51403.1"
                     /translation="MNLVKLLVAIVLFATTFSIFTSNEKEEGRNKDLDFILSHLEEPT
                     IFPRTIITKKL"
     gene            complement(1902..2102)
                     /locus_tag="VLA74_11640"
     CDS             complement(1902..2102)
                     /locus_tag="VLA74_11640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51404.1"
                     /translation="MEIDYYPLNGFFESQTWGALHKCGIGFVIAKEKIELDKIKIYAK
                     RIQHLEKDLGIETTDFSDWEIE"
     gene            complement(2629..2778)
                     /locus_tag="VLA74_11645"
     CDS             complement(2629..2778)
                     /locus_tag="VLA74_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51405.1"
                     /translation="MTGRSVSIELPEEIWKIIDNNFKLNGESDSEIISNIVKDHLAHI
                     HELDI"
     gene            complement(2936..3076)
                     /locus_tag="VLA74_11650"
     CDS             complement(2936..3076)
                     /locus_tag="VLA74_11650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51406.1"
                     /translation="MIIDNIIEEMEKKSTVINKKKRVLFKDEVFMYGIGEDTLVYLLF
                     YL"
     gene            3358..>3906
                     /locus_tag="VLA74_11655"
     CDS             3358..>3906
                     /locus_tag="VLA74_11655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51407.1"
                     /translation="MNYQTSDIIFRTVISMLANKDSSSNKKYTRRGNFLTLFYVSLFG
                     FIFLSGSMLSISPSGLQTQPQAQISLGLQDVDAQQYYPEPQMGYDDRSYGGGGDYYQS
                     NSYDSNRYDSYGSNSYNSYANSYEPPKKSYDDSYDSYDKKERDRKNVAEIEKDDNKLF
                     ICPDTGIVVDDRINCPQKCPFNT"
BASE COUNT         1447 a          626 c          514 g         1319 t
ORIGIN      
        1 aagttaattc tcctgcaccg acattagttt cagggaatgt gataacaaac atccaaacaa
       61 gccccacaga ttggactgca caacgaggta gtggttcaac actattggat tcgataacag
      121 cttatgtgat ctgctttaac aaccccacta cactgacatc gtcgactatt gcaggacaag
      181 aatcatcagt caacgatagt cctgtgcaat tcagtaacag tacagattct agccaagaat
      241 caaaaataaa aagtacagat tctagccaag aatcaaaaat atccagccaa aacaccgaac
      301 aaaacaaaaa cgtagaaaaa accagcaaca acaatgacca aattcaaacc agtaacacac
      361 agtctaatga acagcagatg aaagcactca atcaaaacgt cgaacaaaac aataacgtag
      421 tagaacaaaa gaagagtaca tcacttcctt tgttcaactt caaccaccaa taattttttt
      481 ccaaccctat tttttttagt tataatattt tcttttactt taaatgatta tcttgatcta
      541 tcaaaattga tagcaaagat tttgttaggt attacaccgg atcctttctt aacaaagtaa
      601 agttcttttt acataatggt tattttctaa aaacccctta aagtttagag acaagtatga
      661 aatcggttcc gtgaatcttg taaaactttt agtagcaata gttctttttg ctactacatt
      721 ttctatattt acatctaatg aaaaagaaga aggaagaaat aaagacctag attttatttt
      781 atctcattta gaagaaccaa caatatttcc aagaactata ataactaaaa aattatgata
      841 tcagaaaata gtttactcaa aagaaaaagc aatagatcat ttcatagaat ctgactttat
      901 agattgcagg atcaatgttt ttcctttact aaaagaaggt gcaacttgga ctcctgaatt
      961 gttattcata gatttagatt tatcggattt taacactaaa aggtcattac aaatagcatt
     1021 gaataaaatc ctaaaaagta tcaagaaaaa cttgttgaca ataatgtata tccaacattc
     1081 ctatggagtg gtaatggtta tcgtataatt ttaccagtaa tcttgtcatg cccaattaga
     1141 acgtataaaa tagtttcaag aatttactac tactagcaaa ccgtccaaag aatttttgag
     1201 gtttgctaaa gattatcttt cgaacggtaa agcagacaaa tcatactatc cctttaggtt
     1261 atgtctatta tgtataccaa attctttaaa tggaaaatgt cttgttagaa gaggagaaat
     1321 cttagaaaac tcaattgtaa agataataca agaatgaaat ggttatagac ctcttgtagt
     1381 agagcttttg tatgatttta gaaattattt gatataaaag aagattgatg agtataacta
     1441 taaacaaaaa ttacttgtag ctaacaagaa gaagagaaat aaaaatcata gagattatta
     1501 tccaaataag aaccataata ataataataa taataattat gactggatcg agataatcct
     1561 tgaaacacca tttgaagact acagaaaaat aatgtcaagt cttattttag caccatatct
     1621 tatcaatgta aagaagttac catttcaaca atgatacaag ataataagag aatgacttga
     1681 taaatgcaat tctttacaaa agttagatga ttcaagcagc tttaactcta gaatttccta
     1741 ttctctcaaa aatgcaaaag atagacaaat agggcctata agcttatata agaaagatca
     1801 aaacagattc taattatagt aacttgtata tcttacaaaa gaacaaagga atactcaagt
     1861 agaagaaaat attttattac aaaaaaacaa ataatttatt gttattcaat ttcccagtca
     1921 gaaaaatctg ttgtttctat tcccagatct ttttccaagt gttgtatcct tttggcataa
     1981 atttttattt tatccaattc tattttttct tttgctatta caaagccaat cccgcattta
     2041 tgaagagctc cccaggtctg actttcaaaa aatccattca gaggatagta atcgatctcc
     2101 atattttaaa cccctcctgt aatatttgga agaaaatctt tgaccatata tcctccaaaa
     2161 cttgtcattg gagatcctat atctttgtga tttcatctat tacataaaaa aaatagaatc
     2221 taaagttatt aagctagcaa aaataactac tgataataaa atttatttta gtttaaatat
     2281 ttttttaaag atagctttgt atctatccca cataagatac tatattttaa aaactttttc
     2341 ctacaatatt ttgtatgcta attagtatat ctacacaaag gatcataata ctatagacat
     2401 ttatgactgt cataacaaca tatattattt tttttgttcc aagaaaaaaa tttgcttaaa
     2461 agttttttta ttgaaaagat ctacattttt ttattattct ttcctgcatt atttgagtcc
     2521 attcctcatg agttgtcaac cttttttttc taaaagatct ttaaaagaca taaacatatc
     2581 atgttgaatt tcaactatat cctttagtct atttacatca acgagatttt aaatatctag
     2641 ctcatggata tgagctaaat gatccttaac gatattagag attatttcag aatcagattc
     2701 tccatttagt ttaaagttat tatctatgat tttccagatc tcttctggta gttctatact
     2761 gactgatcta cctgtcattg ttctctgata ttatttatta ttgtatagtg tttatattat
     2821 ttttttaata aatctctttt aactaatttt ggatattcag gaatatattc tgaaagaatt
     2881 tagtcacttg tgtaagagaa tactatagct tggtatgtac atatctaaaa tgttcttaca
     2941 aatagaaaag aagataaaca agagtgtctt ctcctattcc atacataaat acttcatctt
     3001 tgaatagaac tcttttcttt ttgtttatga ctgtactttt cttttccatt tcctctatga
     3061 tattatctat tatcattatt tgttcttgtt cattctgttg agcctttttt atattagctg
     3121 ctttgctcta tatttctccg caatccaatc tgtcaacttc actttcatct ccaataagta
     3181 cacactagta gaatttttta tatcattctt aatattgaat ttttggtaac atactatatt
     3241 tcaataaata actcattaca tgatataatt ttttttttac tatttttaat atagaatatg
     3301 tggtaacata gtattaatca aattaacaat actaacttta gataatctat taagagaatg
     3361 aactatcaaa cctcagatat tatctttcga acagtaataa gcatgctagc taataaagat
     3421 agtagcagca acaagaaata tacaagaaga ggaaattttt taacattgtt ttatgtatct
     3481 ctttttggat tcatattctt gtctggcagc atgctaagca tctcaccatc cggtttacaa
     3541 acacaaccac aagcacaaat atctctagga ttgcaggatg tagatgcaca gcaatattac
     3601 ccagaaccac aaatgggtta tgacgacaga tcatatggag gcggaggaga ttactatcaa
     3661 agtaactctt acgacagcaa tagatatgat agttatggta gtaatagtta caacagctat
     3721 gccaactctt acgaaccacc aaagaagagc tatgatgact cttacgactc gtatgacaaa
     3781 aaggaaagag ataggaaaaa tgttgccgag atagagaagg atgataacaa attattcata
     3841 tgtcctgata ccggcatagt agtagatgac agaataaact gtcctcaaaa atgtcctttc
     3901 aacaca
//
LOCUS       DATIAS010000575         3920 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_784404, whole genome shotgun sequence.
ACCESSION   DATIAS010000575 DATIAS010000000
VERSION     DATIAS010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784404"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..417)
                     /locus_tag="VLA74_11660"
     CDS             complement(235..417)
                     /locus_tag="VLA74_11660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51408.1"
                     /translation="MAINIVITILSIFIDLASSEQNDVGLVIEKPKWCNSASLTDYYT
                     FLEFEKQYKYPCATYI"
     gene            759..1109
                     /locus_tag="VLA74_11665"
     CDS             759..1109
                     /locus_tag="VLA74_11665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51409.1"
                     /translation="MKNENKVIAVTTLTILAISFLYTSNVFAQGNGVIQIQIQGPKIG
                     DNLKISAYTFQNSWEWNDTFTIDNTFVKQVDKVSDGDIVNVCVKDLKEGKESCSSGTF
                     NSNSIANINIEVGS"
     gene            complement(2458..3138)
                     /locus_tag="VLA74_11670"
     CDS             complement(2458..3138)
                     /locus_tag="VLA74_11670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51410.1"
                     /translation="MLERNIIEAISYEFYEIFFISSFVVIIVLSLIISIIPSSFAQSN
                     STTSDYYNPFLGIKLQYPNPWEKVSPSSFDSNTCNLFGCIIAFNLKENIENTESYFSI
                     RSYDLDKIKDECKCSNSIDFMVWKYDNLNNIPGFLFLDDKEITIAGNHSAWVMEYLSL
                     SNNGFNYNYDLLVKYFDKFYDIRFESPSKEYYMEHIGDIKNILNSIEFVPVIQDSEKP
                     SFLIQEYK"
BASE COUNT         1439 a          536 c          563 g         1382 t
ORIGIN      
        1 ccaagaaaaa atatagtagt cggcttgaaa tgttctttga ttttacacaa attcctggaa
       61 gaagtttaga agaacgttgt caaatttttg tcaataaagg acaggataat actaattggg
      121 tgtataatca tctaatcctt agtaatcgtt attgaaaaaa tgttccttaa caattgcttc
      181 ttgtgtatgt taactcaaat gactattatt gataagtacg aaagttacat attcttatat
      241 atatgtagca catggatatt tgtattgttt ttcaaattcc aggaatgtgt agtaatcagt
      301 taggctggca gagttacacc attttggttt ttcgataacc aagccaacat cattttgttc
      361 ggaagatgct aaatctataa aaatagataa tatagtgatt acaatattta ttgccatgaa
      421 gaataatagg aatttcactt caatactatt catctaaata ttaataaatt ttcaaatttc
      481 gtttttcaac attagataac tgaaaataat ttaaatccta ttgtctattt attcattcta
      541 caatttagtt tattgattaa tcaaattagc aaaaagctaa atacactgta gtagaaccct
      601 actacatgga tggcactact cccgacgggc ccagagtttt cttgggttca ctatttcgat
      661 aaattgaaaa taatcttatt atactctaat tggaaaattt atgtatcatt tatcttatta
      721 taaaaattaa attgaaactg attgttatag atttactaat gaaaaatgaa aataaagtta
      781 ttgcagtaac aacattaaca atactagcca tatcatttct ttatacatct aatgtctttg
      841 cacaaggaaa tggcgttatt caaatacaaa tacaaggacc aaaaattgga gataatttga
      901 aaatatcagc ttatactttt caaaattctt gggaatggaa tgatactttt actatagaca
      961 acacctttgt taaacaagtg gataaagttt ctgatggaga tatagttaat gtatgtgtga
     1021 aagaccttaa agaaggaaaa gagagttgct cgtctggcac ttttaatagc aacagtattg
     1081 caaatataaa tatagaagtc ggcagttagt tactaaaaat attattttct ttttaattgt
     1141 ataatatacc ataacaattt atgattttgc aaatagatgt ttttcataaa tatgatgaat
     1201 cgataaaaag tgccaataat aaaaactaaa tacgagctag cagtatattg acaaaagtag
     1261 actcctattt tagaaccgct atcgttatta ctcccgacga agtgaatatc catacaaaaa
     1321 acattgttaa taaaatttac attaagatct tgtgcaaacg attttagtta agagaaactt
     1381 tgttaatata cgcatggaca ctgctcttaa gttacaaaaa atagtacctt ataactctat
     1441 tggtcttctt ttctaggttc cgaattatgt atctgcgtta cagccaattc tgtttttcag
     1501 atgtggaaaa tctttttcta ttctaaagag attatagaag tatgttcaag ttaacaaaat
     1561 tcaacatgtg tatcatagga atgattgtag ggacaactct aattgcaaca ctgcctttca
     1621 ttggactcac atgtaaatgg tgttagaacc gtactaacta ataagggaca aattcatacg
     1681 acgtataccc aaataaacaa gagctgaaca ggtctaccga tatctaaata gattttactt
     1741 gagataatta ttatgaatag ttaatacgat aaaaagattt taccaccaaa tatcataaat
     1801 aatacatata ctatagaatt atatcattac acaaagaaaa atgatgtaat gataataaga
     1861 tgggcagaat ctgaaccata tcattccatc ttattcaata atacctccaa atatccattt
     1921 ttatattttt tcggcgccga aaaaattatg gttgtttttt gctttaaact aaaaaattct
     1981 atggttaata tccatctaca agatttcaat ctacataagc atcttctgta attttaaatc
     2041 attatcagtt atattgcaca atcatttttc tctagtataa aaatagaata ataatgaaat
     2101 gtatgaattg ttatactgaa tacttaccaa gtttatctaa ccctgtctgt ccatcatgta
     2161 gtttttgtca ttattgtaga gaatttacct gttttcatca atataagaaa agtaaatgaa
     2221 ttgatttaca tttaggaaaa tttggataga tcagttatcg gcggattcca tctaacaggg
     2281 gaagggtata atttagctgt aaaaccaaaa caaaatttta acaataagat ctaagtacaa
     2341 gacagtagaa cgctactata tggaagattg cactccagat gaaggcttct aatgtatatc
     2401 atgaatggca agagttcagt gtgatttata agaattattt actcttaatt tgatatatta
     2461 cttatattct tgaatcaaga atgatggttt ctctgaatct tgaattactg gtacaaattc
     2521 aatagaatta agaatatttt ttatatctcc aatatgttcc atgtaatatt ctttagaagg
     2581 agattcaaat ctgatatcat agaatttatc aaaatacttt actaataaat cataattata
     2641 attaaatcca ttatttgata aagacaggta ttccattacc catgcagagt gattcccagc
     2701 tattgttatc tctttatcat caaggaataa gaatccagga atattgttca agttatcata
     2761 tttccatacc ataaaatcaa ttgaattaga acatttacat tcatctttaa ttttatccaa
     2821 atcataagat cttatggaaa aatatgattc tgtattttca atattctctt ttaggttgaa
     2881 cgcaataata catccaaata agttacatgt attactatca aatgatgatg ggcttacttt
     2941 ttcccaagga ttggggtact gtaatttaat tccaagaaac gggttataat aatcactagt
     3001 cgttgaattt gattgtgcaa atgatgatgg tataattgat attattaacg ataaaacaat
     3061 aataacaaca aaagaagaaa taaaaaatat ttcatagaat tcatagctta ttgcttctat
     3121 tatatttctt tctaacatga aaatattcta tgattgctat agaaaataaa tttgatgtaa
     3181 ttaagataat aaaatttgaa caggcatata atgaaaatac attatataat agaaccccgt
     3241 caatttgagt ctattaatta atccgacaga tgatattaat attgagtgtg tatatgcaaa
     3301 agagagcatt gattgttact tatcgtttac tattgcttta caaataatga aggtataagg
     3361 gccttattaa taattcaaat ctaaaatctt aaatattatc gatattgcta taacattgaa
     3421 gtcttatttt agcaccgcta tcgctattac tcccgaaggg caggttttta tcagtgttca
     3481 ctatatcccg gaaaattttc attttatttg attaaatact gaaatcgtat tatttcgact
     3541 ctatggataa cacaattttg tggatgaact cgattgctaa aaagattatt caagagcaat
     3601 tttttaatgt attcaataaa agatatgaat attgttactg tggagtaaga ttaagattga
     3661 gtcttgagtt tctatatatc taatgttata gtataatgaa attgaaaatt atatcattat
     3721 acatatataa ttttattagc ctagtgatat gccttgccaa tgttagatca aaccaataca
     3781 gaaaatatcc ctaatacgag ttggtgtcct cgttgcctgg aagtaggaat ttctgttcta
     3841 ttgggtccac gcctttacaa gaaagaggaa ttaattgatg gtgaattacc atatgactct
     3901 tttgactggc tagagtgtcg
//
LOCUS       DATIAS010000576         2174 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_512409, whole genome shotgun sequence.
ACCESSION   DATIAS010000576 DATIAS010000000
VERSION     DATIAS010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512409"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1345)
                     /locus_tag="VLA74_11675"
     CDS             complement(230..1345)
                     /locus_tag="VLA74_11675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51411.1"
                     /translation="MIIGFTIVIALLFIFTAENTVLAIEYTNYISEKYNIQFEYPKNW
                     HIVEKSSVIDEDPLITISDPMSSSIIFIGYNDIILQSMPLKEVLESMLKAGKSDIKIE
                     IKEVIESPSLLTIDNHTAGTFVVTIEPKFGVDMKKNTNRTWIVPTTNHTYQIIYKSNP
                     EVFDSTTNIEIRDHFIKSINFLEDNMSIQAAPNFVAQNDSNNTINTFEDPKTGISIQY
                     PSDWEIASKEFSEALDKSTDEMLYTLSDQQISQISTTVVDIYPKSLNGAMLGITSELL
                     PFPIPLEQYMELNIQSLKMDLGDISLSLSKSIPVSIGNLNGLKYNLTFPDNSFTQTQI
                     AFVKDSKAFIIFYNLGETEQSKHIDDINLIINSFKIR"
     gene            1692..>2174
                     /locus_tag="VLA74_11680"
     CDS             1692..>2174
                     /locus_tag="VLA74_11680"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF51412.1"
                     /translation="MGNLVINNKQAFKSLNKLTKYTIILSGLLLNAGLLHQIFAEDED
                     RKQDKINNKNNNNQLLDILGNQEVSKIFNQGLELDSQGRYEEAIVYYDKALELDPQDR
                     NSLVYKGLALFYLGKYEEALSWYDKVLEILPYDSYVLDDKGTVLLSMGNYHEAITLFD
                     K"
BASE COUNT          796 a          287 c          302 g          789 t
ORIGIN      
        1 attattcttc ttccatctaa cctctcgaag tacgcttgta caccaacttt catcaggaag
       61 agatgtggtt aaagtaaaca catcctaatt aggtgttatg cagctttaag cttggctgaa
      121 acatttgtta ataagagcga agataattca aaagataata atgtaatttc tagaataata
      181 gagatttttc aaaataaaaa aggaataaaa tagattttcc tcagaatatt tatcttatct
      241 taaatgaatt aataattaaa tttatatcat caatatgctt tgattgttct gtttcgccta
      301 ggttatagaa tattataaaa gctttagaat cctttacaaa tgctatttga gtttgagtaa
      361 aggaattatc tggaaatgta agattatatt ttaatccatt caaattaccg atagaaacag
      421 gaatgctctt actcaagctc aagctaatat cacccaaatc catttttagt gattgtatgt
      481 ttaattccat atactgttct aaaggtattg gaaaaggaag taattcagac gttataccca
      541 acatagctcc attaagagat ttaggatata tgtctacaac agttgtactt atctgagata
      601 tttgttgatc agagagagta tagagcattt catcagtaga cttatctaaa gcttcactaa
      661 attcctttga agcaatctcc caatctgatg gatattgaat agatataccg gtctttggat
      721 cttcaaaagt attgattgta ttatttgaat cattctgagc tacaaaattt ggagctgctt
      781 gaattgacat attatcttct aggaaattaa ttgattttat aaaatgatca cgaatttcaa
      841 tatttgttgt tgaatcaaaa acttcaggat tgctcttata tattatctga taagtatgat
      901 tggttgttgg cactatccac gttcgattag tatttttttt catatccaca ccaaattttg
      961 gttcaattgt aactacaaat gttcctgctg tatgattgtc aatagttaaa agagatggtg
     1021 attcaattac ttcttttatt tctattttaa tatcactttt acctgcttta agcatacttt
     1081 ctaaaacttc ctttaaaggc atagattgta gaataatgtc attgtaacca ataaatataa
     1141 tagaagatga cattgggtct gatattgtta ttagtggatc ttcatcaata acagacgact
     1201 tttcaacaat atgccaattt ttaggatatt caaattgaat gttgtatttt tcactaatat
     1261 aattagtgta ttctatagct aaaactgtat tttctgctgt gaatataaac aataaggcta
     1321 taactattgt gaatcctata atcaaaattg atctatacaa acattcatca attgagttct
     1381 ctttattata aaactttcta atataataaa taataaacca actacagata ctaatattat
     1441 cagaattagt ttttaatatt tactataaaa atttctagta actaatgtaa gacacataat
     1501 tccaaacatg ggatttagtt attatcatga tttataattg tttattaaga gataaaattc
     1561 caaattttga atttattgac tattatgaag ttaaaattat gttttgtagt catatttaat
     1621 tcaatagcaa aatgagttta gatttatcta taaacataac atatgtttat taatctgatt
     1681 aaattaccta aatgggtaac ttggtaataa acaataaaca agcatttaaa tcattaaata
     1741 aattaacaaa atatactata atattatctg gattattatt aaatgctggt ttattgcatc
     1801 agatttttgc tgaagatgaa gacagaaaac aagataaaat taacaataaa aataacaaca
     1861 accaattatt agatattcta ggaaatcaag aggtttcaaa aatttttaac caaggattag
     1921 aattagattc tcaaggtagg tatgaagaag ctatagttta ctatgataaa gccctagaat
     1981 tggatcctca agatagaaat tctcttgttt ataaaggact agcattattt tacctaggta
     2041 aatatgaaga agctttatct tggtatgaca aagtactgga aattcttcca tacgattcat
     2101 atgtactaga tgacaaaggc acagtacttc tttcaatggg taattaccat gaagcaataa
     2161 ccttgtttga caag
//
LOCUS       DATIAS010000577         4620 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2011791, whole genome shotgun sequence.
ACCESSION   DATIAS010000577 DATIAS010000000
VERSION     DATIAS010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4620
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2011791"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..1396)
                     /locus_tag="VLA74_11685"
     CDS             complement(227..1396)
                     /locus_tag="VLA74_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSF51413.1"
                     /translation="MDARNIGLRNIEVADTKICSIDGENGKLIYRGYDILDLVNHSTF
                     EETSYLLLFGELPDKVQLEEFSYTLKESRKIPDSIIANLKNRPKTALPMDVIQSCVPS
                     LSDFDKNIYSDTKEDNIRRGISLISKIPTIVAAWNRIRMGLDVIEADQELSHSANTIY
                     MIFGRKPTLEETKVFDICLILHAEHSFNASTFAAREIASTRAHMYACICGALGALSGE
                     LHGGANIQVMKMLFDIGESKNVEEWIKDKLKEGKRIMGMGHAVYRTTDPRADILERLS
                     KAMCKNENYKWYEITRNIEQYTKKYMSEIKKQSIYPNVDLYSASLYYSMGFPIDLNTP
                     IFAISRISGWVSHVIEEKFAEAAPKPALYRPKAVYVGKYCGPMGCEYTPLNKRKP"
     gene            complement(1487..2083)
                     /locus_tag="VLA74_11690"
     CDS             complement(1487..2083)
                     /locus_tag="VLA74_11690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit beta"
                     /protein_id="HSF51414.1"
                     /translation="MAYQYFPGATAVGISFNNGVLLASERRVSFGNFVVNKSTKKTFV
                     LTENVGAACAGMVADMNVLARQVAALSKIRKFEIRRDLPTNSVAKLLSVIMFERRYFP
                     LLTQVVVGGYDTKPQIYTLDPLGSLLPDEYASVGSGAEMALGVLDAQYNSKMNEEDAR
                     NLAIKSIKSSIQRDASSGDGIDILIINNRGKKEESIKV"
     gene            complement(2143..3774)
                     /locus_tag="VLA74_11695"
     CDS             complement(2143..3774)
                     /locus_tag="VLA74_11695"
                     /inference="COORDINATES: protein motif:HMM:NF024977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSF51415.1"
                     /translation="MSIQLKVHPSFFKEFATKTWISPYEIIKELVENAFDEDATKVLI
                     TVLNNGSIVVEDDAGMDAEGIEKFLLLGSPHKKIESISPKLKRIRTGRYGTGRLSFLT
                     SFANMKIKTKKNNYTKCIIIDESSLNQLFTGNSLLNEIKDRPLSRNGTELSLNNVKMN
                     IDLLKLTKEIRKLAILRQPLFQVFIKQADQFTEWDFNDSDIVKAQEIQGYHIPVNLDN
                     GQIRGEIIVARRPLTEEEKGIGIMIGNHIVVRSHFGFDAKLNRITGLIRCDTLTSRFA
                     DKSAIIEDDAYYNFNKIVRQFIADEVIPKLSQYEDVLITKEESRIYREIDKVLGQAVI
                     ENLESVEVEEEYETIEDKDSASNENSSNVNSISNTKSTTQDNKVLTDERYDNKSIEIS
                     NTRKQDHTDILEHQIIHPESEPTYYNPAENLQVSPVLQTAENLNNMQVKKIKTLKRTF
                     ALKKIGYKVIPYEDETDSRYGFTNENVVFVNKANSAYKAEAERGDEFLLRHIIRIVAE
                     AIAEEKHPEGKDALELQNRLIGEAIKIHNLHSRKK"
     gene            complement(3865..>4620)
                     /gene="rplJ"
                     /locus_tag="VLA74_11700"
     CDS             complement(3865..>4620)
                     /gene="rplJ"
                     /locus_tag="VLA74_11700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HSF51416.1"
                     /translation="QLMTLRKKFHNQINIRIIKNKVAQRAFEKVKGIAGIEDLSKELE
                     GQCALMFTNLSPFKLNLIFGENKVFLPAKGGDIAPKDITIPAGNTGIPPGPVLSEFKE
                     AKVPTKIDQGSIAVTKDTMVARSGEVISQKLASLLSKVNIKPIEAGILVNYAISEGLQ
                     FREQDLQLDVKEYIKQLQQSYSSALNLAIEIVYFAPETMSSLLSIAYQKSLNVASTAG
                     YISKDTVEIVINKAQANTYGLSQILKSKGYDHQ"
BASE COUNT         1418 a          759 c          640 g         1803 t
ORIGIN      
        1 aataattttc tatttttttc aatttcataa gctttgatat ttttaatttt tggaataata
       61 ttttctggcc aatttagtaa taatttattt aatatagatg aagtttcttt ttttgataac
      121 atatttattt tcaaactata tcattaccta tattatcata atttattata tctttaattt
      181 tcaaaaaata aagaaataga ttgaatatta aaaatgaaat aaataatcat ggttttcttt
      241 tatttaatgg tgtatactca catcccatag ggccacaata tttacctaca tacactgcct
      301 ttggtcgata taatgcaggt tttggagctg cttctgcaaa tttttcttca ataacatgtg
      361 atacccatcc agaaattcta gaaattgcaa aaataggagt attaaggtca attggaaatc
      421 ccatactata ataaagagat gcactataca aatctacatt aggatagatt gattgttttt
      481 taatttctga catgtacttt ttagtatatt gttctatatt tctagtaatt tcataccatt
      541 tgtaattttc atttttacac attgcttttg aaagtctttc taaaatatcg gctctaggat
      601 ctgttgttcg ataaacagca tgtcccattc ccattattct ttttccttct tttagtttgt
      661 ctttaatcca ttcttccaca ttttttgatt cacctatatc aaaaagcatt ttcatgactt
      721 gaatattagc tcctccatgt aattcccctg ataatgctcc taatgcacca caaatgcatg
      781 catacatatg tgcccgtgta gaagcaattt ctcgtgctgc aaaagtagaa gcattaaaac
      841 tatgttctgc atgcaatatc aaacaaatat caaaaacttt agtttcttca agagtcggtt
      901 tacgtccaaa tatcatataa atagtatttg cagaatgcga aagttcttga tctgcttcta
      961 taacatccaa ccccattctt attctattcc atgcagcaac tattgttgga atttttgata
     1021 taagggaaat cccccttctt atattgtctt ctttggtatc agaataaata tttttatcaa
     1081 aatcagatag ggaaggaaca catgattgta tgacatccat tggtagagcc gtttttggtc
     1141 tattttttaa atttgcaatt atggagtctg gtatttttct tgattctttt agtgtgtatg
     1201 aaaattcttc taattggact ttatcaggaa gttctccaaa caataagaga taacttgttt
     1261 cttcaaaagt agaatgattt actagatcta aaatatcata gccgcggtaa attaatttac
     1321 cattttcgcc atcaatagaa cagatctttg tgtctgcaac ttcaatattt cgtaaaccga
     1381 tatttcttgc gtccaacttc taatttatca taatatttga gatttatata ttaaaagaat
     1441 acgaaagtga aagaagaata tatgattgtt catagaatat agccatttat acttttattg
     1501 attcttcctt ctttcctcta ttattaataa taagaatatc tataccatct ccacttgaag
     1561 catctctttg aattgaggat ttaatagatt taatagctaa atttcgggca tcttcctcat
     1621 tcattttgga attatattgc gcatccaaga cacctaaagc catttcagca ccagaaccta
     1681 ctgatgcata ttcatcagga agtaatgaac ccaacggatc aagtgtatat atttgaggtt
     1741 tggtatcata gcctccaact acaacttgag ttaacaatgg aaaataacgt ctttcaaaca
     1801 taattacaga caataatttg gcgactgaat tagtgggaag atcccgtctg atttcaaatt
     1861 tgcgaatttt ggataatgct gctacctgtc tggcaagtac attcatatcg gcaaccatac
     1921 ctgcgcatgc tgctccaaca ttttcagtga gaacaaaagt ttttttagta ctcttattta
     1981 caacgaaatt tccaaaagat acccgtcttt cagatgccaa taaaacacca ttattaaaag
     2041 agattcctac ggctgttgcg ccaggaaagt attgataagc catttgtggt atatcaaata
     2101 atagccagat ttagtctttt ctattaactt tgacttcaga ttttattttt ttctactatg
     2161 aaggttatga attttaatag cttctccaat aagacgattt tgtaattcta aggcatcttt
     2221 tccttctgga tgtttctctt cagctatagc ttcagctact attctaatga tgtgtctcaa
     2281 aagaaattca tctcctcttt ctgcttctgc tttataagct gaattagctt tatttacaaa
     2341 tactacattt tcattagtaa atccatatct tgaatctgtt tcatcttcat aagggattac
     2401 tttatatccg atttttttca atgcgaaggt ccgtttaaga gtttttattt tttttacttg
     2461 catattattt aaattttctg cagtttgcaa aacaggagaa acttgtaaat tttctgctgg
     2521 attgtaataa gtaggctcac tttctggatg gataatttga tgttctaata tatcagtatg
     2581 atcttgtttt ctagtattgg aaatttcaat agatttatta tcatatcttt catctgtcaa
     2641 gactttatta tcttgagtcg tagatttggt attagaaata gagtttacat tggaactatt
     2701 ctcattagaa gctgaatctt tatcttcgat tgtttcatat tcttcttcta cttccacaga
     2761 ttccaggttc tcaatcacag cctggccaag aactttatct atttcgcgat aaatacgtga
     2821 ctcttctttg gttattaata catcttcata ttgagataat tttggaatta cctcatcagc
     2881 aataaactgt cttacaattt tgttaaaatt ataataagca tcatcttcta ttattgcaga
     2941 tttatctgca aatctagagg ttagagtgtc acatctaatt aatcctgtta ttcgatttaa
     3001 ttttgcatca aatccaaagt gacttctaac aacaatgtga ttgccaatca ttatacctat
     3061 tcctttttct tcttctgtta aaggacgtct tgcaactata atttcacctc taatttgacc
     3121 attgtctaga tttactggaa tatgatagcc ttgtatttct tgggctttta ctatatcaga
     3181 gtcattaaaa tcccattcag taaattgatc tgcttgtttg ataaaaactt gaaatagtgg
     3241 ttgtctaaga attgctaatt tccgtatttc tttagtcagc tttaacagat caatattcat
     3301 ctttacatta ttaagcgata actctgttcc atttctagaa agtggtctat cttttatttc
     3361 gtttaataaa gaattaccag taaataattg gttaagagag ctttcgtcta taataataca
     3421 tttggtataa ttatttttct ttgttttaat cttcatattt gcaaaggatg taaggaaaga
     3481 caatcttcct gtaccatatc ggccagtgcg aattcttttt aattttggag atatcgattc
     3541 tatttttttg tgaggggagc ctagtaatag aaatttttct attccttcag catccattcc
     3601 tgcgtcatct tctactacta tagacccatt gttaagaacg gtaatcaata cctttgtagc
     3661 atcttcgtca aaagcatttt caaccaattc tttaattatt tcatatggag agatccatgt
     3721 ctttgtggca aattccttaa aaaaagatgg atgaactttt aattgtattg acattatata
     3781 ttagtaaaaa gattttcttg cctttattta ttgtgttgtt attatccaaa agaatgtaaa
     3841 aaatttgata aattttgtgt aaatttattg atgatcataa ccttttgact ttagaatctg
     3901 actcagacca taggtatttg cttgtgcttt gttaattact atttccactg tatctttaga
     3961 gatgtaccca gctgttgacg ctacatttaa tgatttttga tatgctatgg ataaaagaga
     4021 actcatagtc tctggagcaa aatagacaat ttctattgca agatttaaag cagatgaata
     4081 agattgctgt aattgtttaa tatattcctt aacatcaagt tgtaaatctt gttctctaaa
     4141 ttgaaggcct tctgaaattg cataattgac taatatacct gcttcaattg gttttatatt
     4201 tactttggat aataaagaag caagtttttg agaaataact tctcctgatc tagctaccat
     4261 tgtatccttt gttactgcaa tactaccctg atcgattttg gtaggaactt ttgcttcttt
     4321 aaattctgat aaaactggac ctggtggaat tccagtattt cctgcaggaa ttgttatatc
     4381 ctttggtgct atatcaccac cttttgcagg taagaatact ttattttctc caaaaattaa
     4441 attaagttta aaaggactta aatttgtaaa cataagagca cattgacctt ctaattcttt
     4501 gcttaaatct tcaataccag caatcccttt tactttttca aacgctcttt gagcaacttt
     4561 attttttatt attctaatgt taatttgatt atgaaatttt tttcttaaag tcattaactg
//
LOCUS       DATIAS010000578         3114 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_921778, whole genome shotgun sequence.
ACCESSION   DATIAS010000578 DATIAS010000000
VERSION     DATIAS010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921778"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..2602)
                     /locus_tag="VLA74_11705"
     CDS             complement(227..2602)
                     /locus_tag="VLA74_11705"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSF51417.1"
                     /translation="MIIQNLVVFLIPILGTIIICPLNSIDSKPIIKGPYIDNVKFIHY
                     LDENVALEEIKSGNLAMYYFRIPLDLVPSILADDDIKLYDKVSGTFGILLNPAPAEDG
                     SINPFQFREIRYAMNFLFNRNFISNEILQGYGFPLFDPFGPLSPDYRVVMDTVESYGF
                     HYDPEFVSNIIGKVLQNNGAFLEDKKWYFNEKPITLKILIRSDDQQRKVLGELISSEL
                     EKMGFTVIKDYGDLNKSLRILQNTNPQDLQWNMYTEAFTSNAFSRYNEDIVAQFYAPW
                     YANMPGYQNPGFWQYQNSTLDFLTQKLVFSNFTSESERNTLLEAATKMGIEESVRIFL
                     VKNIDPFAASSSVSGLVNDFGGGIANKYSLFNAKSNKTNFLDIGVKQIYQGAWNTIGG
                     FGDTYSSNIYSNIADSSILRHPFTGDVISMRNDVINVTTNGPYNKLKVHPEAIIWNSS
                     HGWIYADHNSTSLSKVINKILYSNWHHGIPMDKSDLLYSLYFMFEWGSNYGAEDLTQD
                     PEYTSRVEVSLPLMKGIRFLSHDTIESFIDIWHYDSKEITGYAGLWPQEPWEISAATE
                     RLVLSNVLSFSKSQATTKNAEWLSLIIPGHANLIKKELMKMKDENFIPLPLKNIVSLE
                     AAKKRYDASIKWIEDHKHAVISNGPFFLDSYNPSGRTMEIKAFRDQTYPFEQGYWSHL
                     EKPKSIQLTNFTTDKFIKIREEKVIDFQALVDNSPQSNISIYYFLIDYSGKIVNSGMA
                     EKINDVGSFQIQLHKKLTETLRQGPVSLKIFANTNEALKPFISNNLYLVIK"
     gene            complement(2664..>3114)
                     /gene="tfb"
                     /locus_tag="VLA74_11710"
     CDS             complement(2664..>3114)
                     /gene="tfb"
                     /locus_tag="VLA74_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018852.1"
                     /note="stabilizes TBP binding to an archaeal box-A
                     promoter; responsible for recruiting RNA polymerase II to
                     the pre-initiation complex; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcription initiation factor IIB"
                     /protein_id="HSF51418.1"
                     /translation="LVRGRSISALVAAALYAACRDTETPRTLKDIANASNIKKKDVAR
                     CYRLLIRELDLRMPVVDPVKCVARIASKAGLSEKTKRKALEILKKAEEGKISAGKDPM
                     GLAAAALYVACVMNGENKTQKDVAEAAGVTEVTIRNRYKGLKTHLKL"
BASE COUNT         1011 a          533 c          486 g         1084 t
ORIGIN      
        1 atgaccagga ctatatgccg ttgaaacaga tataggaact gcaatagaaa agctcatgga
       61 atataatgtg aagtaataaa aacttgaaaa tataaaaata tcgatatagt ttgatattct
      121 aataattgac aacataatct catgataaaa aaattaataa tattataaaa gacaaaaaat
      181 taaagagagc atcagaaaaa gctatataaa tataagatta ctaaaactat ttaatgacta
      241 agtagaggtt attagaaata aatggtttca atgcttcgtt agtattcgca aatattttta
      301 atgaaactgg tccttgcctt aatgtttcag ttagtttttt gtgcaattga atttgaaaag
      361 atccaacatc gttaattttt tcagccattc cagaattcac tattttcccg gaataatcaa
      421 taagaaagta ataaatggag atattggatt gaggtgaatt atcaactaga gcttgaaaat
      481 cgattacttt ttcttctctg atttttataa atttgtcagt tgtaaagttt gttagttgaa
      541 tagattttgg tttttctaaa tgtgaccaat aaccctgttc aaaaggatag gtctgatcac
      601 ggaatgcctt tatttccatg gttcttcctg atggattata cgagtccaag aaaaatggac
      661 cgttgcttat tacagcatgt ttatgatctt caatccattt tatgcttgca tcatatcttt
      721 tctttgccgc ttccaaggat acaatatttt ttaatggtaa aggaataaaa ttttcatctt
      781 tcattttcat taattctttt tttattaagt ttgcatgtcc tggaattatt aacgatagcc
      841 attctgcatt ttttgtagta gcttgagatt tggaaaatga aagaacattt gaaaggacta
      901 atctttcagt ggcggcagaa atttcccatg gttcctgtgg ccacaatcct gcatatcctg
      961 ttatttcctt gctatcataa tgccatatat caataaaaga ttctatagta tcatgagaaa
     1021 gaaatcgaat ccccttcatt aaaggaagac ttacttctac acgtgacgta tattctggat
     1081 cttgtgtaag atcctctgca ccgtaattag atccccattc aaacataaaa tacaaagaat
     1141 aaaggagatc ggatttgtcc attggaatcc catgatgcca atttgaataa agtatcttat
     1201 taattacctt actcagagaa gtagaattat gatctgcata tatccatccg tgggaactat
     1261 tccaaattat tgcctcagga tggactttaa gtttattata tggtccatta gtcgttacat
     1321 ttatgacatc atttctcata gatataacgt cgcctgtaaa cggatgtcgg agaattgaac
     1381 tatcggctat atttgaatag atgttgctac tataagtatc accgaaccca ccaatagtat
     1441 tccatgctcc ttgatagatt tgcttaacac ctatatcaag aaaattcgtt ttgttggatt
     1501 tagcgttaaa taaggaatat ttgttagcta ttcctcctcc aaaatcattt actaatccag
     1561 aaacagagga tgaagcagca aaaggatcta tattctttac tagaaatatt cgtacagatt
     1621 cctcgattcc catctttgtt gctgcttcta ataacgtatt tctttcactt tctgacgtaa
     1681 agtttgaaaa aaccaatttt tgagtcaaaa aatctaatgt tgaattttga tattgccaga
     1741 atcctggatt ttgataaccc ggcatgtttg cataccatgg tgcgtaaaac tgagctacta
     1801 tgtcttcgtt atatctagaa aatgcgttac tagtaaatgc ttctgtatac atattccatt
     1861 gaagatcttg tggattagtg ttttgtaaga tccttagtga tttgtttaga tctccataat
     1921 ctttaatcac agtaaatccc atcttctcga gttcagatga tatcaattca ccaagtactt
     1981 ttctttgttg gtcatcgctt cttatgagaa tttttaaggt aattggtttt tcattaaaat
     2041 accatttttt gtcttcaaga aatgccccat tattttgtaa aacctttcca attatatttg
     2101 aaacaaattc gggatcgtaa tgaaaaccat atgattcgac agtatccatt accacacgat
     2161 aatcaggaga aagcggtcca aagggatcga ataatggaaa accatatcct tgcaatattt
     2221 cgttagaaat aaagtttcta ttaaataaaa aattcatagc ataccttatt tcacggaatt
     2281 ggaatggatt aatactgcca tcttccgctg gtgccggatt tagaagaata ccaaatgttc
     2341 cagacacttt atcatataat ttaatatcgt catcagcaag aatgctggga accaaatcca
     2401 agggaatacg gaaataatac atagcgagat tgccagactt tatttcctct aatgcaacat
     2461 tctcgtcaag ataatgaatg aacttgacgt tatctatgta tgggcctttt ataataggtt
     2521 ttgaatcaat agaatttaaa ggacaaatta ttatggtacc taaaatcgga attaaaaaga
     2581 ctacaaggtt ttgaataatc ataactacat taaaaggtca tcataaatat ctacatttta
     2641 gtaaaaaaca ttttaaataa gaattatagt tttaagtgtg tttttaatcc cttgtatcta
     2701 tttctgattg tcacttctgt aacacctgct gcttctgcta cgtctttttg ggttttattt
     2761 tcaccattca ttacacaagc tacataaaga gctgcagctg ctagtcccat aggatcttta
     2821 ccggctgaaa tcttgccttc ttctgctttc tttagtatct ctaacgcctt acgttttgtt
     2881 ttttctgata atccagcctt acttgctatt cttgcaacac atttaaccgg atcgaccaca
     2941 ggcatgcgta aatccaactc tctgattaat aacctataac atctagcaac gtcttttttc
     3001 ttaatattac tagcgtttgc tatatctttt aaagtcctgg gcgtttctgt atcacggcaa
     3061 gcagcatata atgcagctgc gactaatgct gaaatcgacc ttcctctaac aagg
//
LOCUS       DATIAS010000579         3246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_512998, whole genome shotgun sequence.
ACCESSION   DATIAS010000579 DATIAS010000000
VERSION     DATIAS010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512998"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..80)
                     /locus_tag="VLA74_11715"
     tRNA            complement(6..80)
                     /locus_tag="VLA74_11715"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43..45),aa:Gly,seq:ccc)
     gene            complement(164..514)
                     /locus_tag="VLA74_11720"
     CDS             complement(164..514)
                     /locus_tag="VLA74_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51419.1"
                     /translation="MNLQIVLISGLVCTFIFLSSFTNLVFAEDFPVIFAFKEQYLPSK
                     YTTSYLTFMINNALGGSSSYVSNSESHETFKEQFVSIESLDYNNKMMFEDPSQQLTSL
                     STNSAPFILPLPFP"
     gene            complement(755..2596)
                     /locus_tag="VLA74_11725"
     CDS             complement(755..2596)
                     /locus_tag="VLA74_11725"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSF51420.1"
                     /translation="MGFSIIKNNFSFLLIIIIIGIGFLSIISYQSASFTADEIKKIAE
                     EDIRSNARIQTYDLSRILVHSLDSIISNLELLTSSPLILQNDLDQIQNLLYTAQLSTL
                     KITDAYYWMDINGRIVSSSKIYQGENLNTNLNLQNQPFFLFPKKTLSPYYSTSIKSED
                     SPSSSLYISYPLLKQQIIKHQNDTFSIRQTFDGVIVASISVKSLGIFLQNEMVSSIIG
                     NVGLMDRNGVIIYARNQSLIGNNYLSTEFQSLIPENLRGDYNSILKKGLEGKSLAEDL
                     VYNGTTVTLSYEPIVISDKYLWTLYVSFPHQLASNVGSLIAQQNNFSTLIVVITGSVT
                     VGIIYLILSWNRRLKGEVSTRTSQLKNINLSLVESNRLLEEANEQLKVHDKMQKEFIN
                     IAAHELRTPIMPILGEVELIEDDLDPEDKTVKVQEEQIKLIIRNAKRLDRLASDILDV
                     TRIESNSLVLQKDYFDLNDILSDSIKDIRKRISSGDGFAKNIEAIYQPTNVRIFGDKE
                     RINQVISNLLSNALKFTEKGFIKISVTKKDQDVLISVEDTGSGIDAEIYPRLFCKFAT
                     KSDKGTGLGLYISKNIVDAHHGKIWAHNNPNGIGATFFFKLPLHDKT"
     gene            complement(2773..>3246)
                     /locus_tag="VLA74_11730"
     CDS             complement(2773..>3246)
                     /locus_tag="VLA74_11730"
                     /inference="COORDINATES: protein motif:HMM:NF028455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51421.1"
                     /translation="FVLDSSAFYSGFHLSNSKKYYTTPLILDEVRHLKNLTSSYDALI
                     ISESLFALEPNVESVSMTRTIAFSSGDIDRLSDADISIISLSYQLGYPLVSDDYCVQN
                     VSKIMGIEIISLGISEISKIRKWINFCKTCGKGYSPKITECTICGNKTRRRYKNK"
BASE COUNT         1125 a          514 c          509 g         1098 t
ORIGIN      
        1 caatatgcga gatgcgggat ttgaacccgc gaccccgagc ttgggaagct cgtaccctaa
       61 ccggcctagg ctaacctcgc gatattgaaa aaaatacaat tcagatatat attcttaata
      121 gttattttca atttgtttct atttttaact cctctaaaat acattaggga aagggtaatg
      181 gcagaataaa tggtgcacta ttagtactaa gagacgttaa ttgttgggat ggatcttcaa
      241 acatcatttt attattatag tccaatgatt caattgagac gaattgttct ttaaatgttt
      301 catgggattc actattagaa acgtatgaag atgaaccacc taatgcatta tttatcatga
      361 atgtgagata tgacgtggtg tatttcgatg gaagatattg ttctttaaat gcgaaaatta
      421 cgggaaaatc ctcagcaaac acaagatttg taaacgatga tagaaaaatg aatgtacaca
      481 caagtccact tattaataca atctgtaaat tcatttttgc ttgcaatatc tagttctaaa
      541 taaatatatt tgatttagga tagttcaatc catagtaatc tgtgattata tttgaatgga
      601 aaataatatg taaaataata ttagaagatt aatacagata agagtataat tggaatttga
      661 tatatcttgt tattgaaaga tttttaaaga taaaaatatt attattttta aatcaaagta
      721 taaaaatgaa aacctagaaa tttcttaaac cttattaagt tttatcatgt agtggaagtt
      781 tgaagaaaaa agtagctcct atgccgttag gattgttatg agcccatatt ttaccgtgat
      841 gtgcatcaac tatattttta gaaatataca gacccagtcc agtaccttta tcagattttg
      901 tagcaaattt acaaaataga cgaggataaa tctccgcatc tattccactc ccagtatctt
      961 caacactaat aagtacatcc tgatctttct ttgtaacact gattttaata aaaccttttt
     1021 ctgtaaattt caatgcgtta ctcaataaat tgctaattac ttggtttatc ctctccttat
     1081 ctccaaaaat cctcacatta gttggctgat agatagcttc tatatttttg gcaaaaccat
     1141 ctccggaaga tatacgcttc cggatatctt tgatggaatc agaaagaata tcattaagat
     1201 caaagtaatc tttttgaagg actaaagaat tgctttcgat cctagttaca tcgagaatgt
     1261 cagaagctaa tctatctaac cgttttgcat tcctaatgat taatttaatt tgttcttctt
     1321 gaacttttac agtcttgtcc tctggatcaa ggtcatcttc tattaactca acctctccta
     1381 gaataggcat tataggggtt cgtaattcat gagctgcaat gttaatgaat tctttttgca
     1441 ttttatcgtg tacctttagc tgttcattag cttcttccag aagtctattt gactccacca
     1501 aagacaggtt aatatttttt aattgtgacg ttctagtact aacttccccc tttaatcgtc
     1561 tgttccagga aagaattaga tagattattc caacggtgac tgagccagta attacaacta
     1621 tcagagtact gaagttattt tgttgagcta tcagagaacc tacgttactg gcaagctgat
     1681 gtggaaaact aacatataaa gtccacaggt atttatcact aattactatt ggctcgtatg
     1741 ataaggttac tgtagttccg ttatacacta aatcttcggc aagggatttt ccttcaagac
     1801 ctttcttaag aatactatta taatcccccc tgagattctc tggaattaaa gattgaaatt
     1861 cggtggaaag ataattgttg cctattagag actgatttct agcatagatt atcacaccat
     1921 ttctatccat taaaccaaca ttacctataa tagaagatac catttcattt tgtaaaaata
     1981 tacctaagga ttttacactt attgaagcaa caattacccc atcaaatgtc tgtcttatgc
     2041 taaaggtatc attttgatgt tttattattt gttgttttaa taaaggatat gaaatgtata
     2101 aagaagagga tggactatct tctgacttga tcgaagtact gtagtaagga gatagtgtct
     2161 tttttgggaa tagaaaaaaa ggttgatttt gaagatttag atttgtattg aggttttctc
     2221 cttgatagat tttactagag cttactattc taccattaat atccatccaa taatacgcat
     2281 cagttatttt caaggttgat agctgtgcag tataaagaag gttttgaatc tggtcaagat
     2341 cgttttgcaa aatcaagggg gaagaagtca agagttctag atttgaaata atcgagtcta
     2401 aactatgaac aagaatcctt gaaaggtcat aagtctgtat tcttgcatta gaacggatat
     2461 cttcctcagc aatctttttt atctcatctg cagtaaagga agccgactga taggatatta
     2521 tggaaagaaa accaataccg attattataa ttatcaaaag aaaagaaaaa ttgtttttta
     2581 ttatagagaa acccatcaac tgcagacaaa taagaagatt atattctaat aaataaatca
     2641 actagaaaaa atattataga aaaatcgtat gctaatattt tcttattatc cactcccatg
     2701 gaagtcataa taatgactta aaaacaagaa accgtaatcc aagatgaagt tccagaatat
     2761 tcaaatatca aattacttat ttttatatct tcttctagtt ttgttaccac aaattgtaca
     2821 ttcagttatt ttaggtgaat aacctttacc acaagtttta caaaaattga tccatttccg
     2881 gatttttgaa atttcagata tgcctagaga aataatctca atacccatga tcttcgatac
     2941 attttgaaca caataatcat ctgaaactag gggatagccc aattgataag atagagaaat
     3001 aattgaaata tccgcatcag aaagtctatc aatgtctcca gagctaaagg ctatagttct
     3061 cgtcattgaa acggattcaa catttggttc aagtgcgaac aatgactctg aaattattaa
     3121 agcatcgtaa ctcgaagtca aattctttaa atgacgaacc tcatcaagaa tcaatggagt
     3181 agtgtaatat tttttactat ttgaaagatg aaatccagaa taaaaagcac tagaatccaa
     3241 tacaaa
//
LOCUS       DATIAS010000580         4334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2012289, whole genome shotgun sequence.
ACCESSION   DATIAS010000580 DATIAS010000000
VERSION     DATIAS010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4334
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2012289"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2668)
                     /locus_tag="VLA74_11735"
     CDS             complement(<1..2668)
                     /locus_tag="VLA74_11735"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF51422.1"
                     /translation="MSLESLDRHEEAEQYYNMVSEKYLKEINDVKKKATEYQNLHKYE
                     EALLYYDILLTIDTKNKFNTLLNKGVILYKLNKYEEAIECYDKVIEKDPDNIEALNAK
                     GLALEKLRKYDDAIQLFDLVIAKNPPFVIDTIIKKGDIFMELENYPEAEKSYNDALKS
                     DQNNISALNKLHTLYSNYTFQYDKAISVSKRLLKNTLEREVKINTKLLLVQDLINDGN
                     YEQGKKIAKEVIKNSPFEAIRRRGIGHALIIIAYLLQRNKLEGIKELINFLVYYTNLD
                     VDIKYEKNQWNFKGLINTINKNQKIDSATKTILRNLIDLLHGDKDSQKRLSKIATETL
                     EEEKKIKIRNKIKKTAIISLVVMAALSIYYVQMTVLESCSVPESRQINIGDVGSAPIG
                     IDFNPNNNKAYVANEKDSTISIIDCNVPRYYNIFKQYFGFDTQLQLQVEDKTISLDNP
                     PSGIAVNPTTNKIYVIHQLPSPSLSIIDGNNNYQKLNFPMGRYPVDIAVDPIINKVYV
                     ANSIDGNVSVIDGETDKWIGDIDVGDKLFSVAINPTTNKLYVTHEGSNIVSIIDETKE
                     KDNIKNISLYQFIADLNINSKTNKVYVTYPINNTITVIDGTSDTKIKEIDVGDKPIRI
                     DIDEEADKVFVVNQDSDSVSVIDGATDTIIKTLKIPSKYPYDVEFNSDINSLYVINMG
                     SNSRSTVDIMKYDDNDDDNNLNYIHVGDKPVDIDVNPKTKKAYVVNYNSDTLSIINST
                     NRVEEIIDVGDKPRSIAVNPTTNKIYVTHQTPSSPSLSIIDENNNYQILQENITIGKD
                     PVDIAVNPITNKVYVANYGDGTVSVINGKTDQLINEGIDVDENAFTIDVNPNTNKVYV
                     GYSNNFHLSVIDDKSNRLLRDINDEPVKIGLFY"
     gene            complement(3354..3941)
                     /locus_tag="VLA74_11740"
     CDS             complement(3354..3941)
                     /locus_tag="VLA74_11740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51423.1"
                     /translation="MLAENKQTPMYYMAEASNIENIKIAISKKEFNAKISYLIKAAEN
                     FFSIKDSSTNLIDIQGIDNAAKKVYELINLDPNNKEIPRLQTIIDDALNMYKQFAMEW
                     INNNMMVARLKINEIQSDLYDIELPYLFDSLSFNELKKIDQLKLQILIYLSSEIRRKT
                     IFESPDDRNLKILIAKLRAAFGTNRTSKPFTVGNI"
     gene            4111..4242
                     /locus_tag="VLA74_11745"
     CDS             4111..4242
                     /locus_tag="VLA74_11745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51424.1"
                     /translation="MGSLDAKTILPLPIFASKAVTSVSDDLIRSFALLRRNQNILKI"
BASE COUNT         1327 a          653 c          548 g         1806 t
ORIGIN      
        1 gataaaaaag tcctattttc actggttcat cattaatgtc gcgtaaaagc ctattacttt
       61 tatcgtcaat aactgaaagg tgaaaattat tactgtaacc tacatatact ttatttgtat
      121 taggattgac atctatagta aatgcatttt catctacatc tatgccttca tttatcaatt
      181 gatctgtttt tccattaata acagaaacag taccatctcc ataattagcc acgtatactt
      241 tgtttgttat tggattgaca gctatgtcta caggatcttt acctatagtg atattttctt
      301 gtaatatttg gtaattatta ttttcatcaa taattgaaag agaaggagaa gaaggtgttt
      361 gatgagtcac atatatttta tttgtagttg gattaacagc tatactacgt ggtttatcac
      421 ctacatctat tatttcttcc actctatttg tagaattaat tatagataaa gtatcagagt
      481 tatagttgac tacatatgcc tttttcgttt taggattaac atctatgtca actggtttgt
      541 caccaacatg aatatagtta aggttgttat catcatcatt atcatcatat ttcattatat
      601 caactgtact cctagaatta ctacccatat taatgacata taaagaattt atatcagaat
      661 taaattctac atcataagga tacttactag gaatcttaag agtttttatt attgtatctg
      721 tggcaccatc aattactgat actgaatcag aatcctgatt aactacaaaa actttgtcag
      781 cttcttcatc aatatctatt cgtatgggtt tatcacctac atctatttct tttatctttg
      841 tgtcgcttgt accatcaata actgttatag tattattaat aggataggtt acatacactt
      901 tattggtttt tgagttaata ttaagatctg ctatgaattg atagagagat atatttttga
      961 tattatcttt ctcttttgtc tcatcaatta ttgaaacaat attagaacct tcgtgggtta
     1021 catataattt atttgtagtt ggattaatag ctacactaaa tagtttatca cctacatcta
     1081 tgtctcctat ccatttgtct gtttctccat caataactga aacattacca tctatactat
     1141 tagccacgta tactttgttt attattggat cgacagctat gtctacagga tatctgccca
     1201 taggaaaatt taatttttga taattattat ttccatcaat aattgaaaga gaaggagaag
     1261 gtaattgatg aattacatat attttatttg tagttggatt aacagctata ccagatggag
     1321 gattatctaa tgatatagtt ttgtcttcta cttgtagctg tagctgagta tcaaaaccaa
     1381 aatattgttt aaatatgtta taatatctag gcacattaca atctataatc gaaatagtgc
     1441 tgtctttttc attagcaaca taggctttat tattgtttgg attaaaatca atacctatag
     1501 gtgcgctgcc tacatcacct atatttattt gtctagattc gggtacggaa catgactcta
     1561 gaacagtcat ctgaacataa tatatactaa gtgcagccat aacaactaga gatataattg
     1621 ctgttttttt tattttatta cgtattttta tttttttttc ttcttcaaga gtttcagtgg
     1681 ctattttcga taatcttttt tgactatcct tatcgccatg caataaatct attaaattac
     1741 gaagaatagt ctttgtagct gaatctattt tttggttctt atttattgta ttaattagac
     1801 ctttaaaatt ccattgattc ttttcatatt tgatatcaac atcaaggttt gtatagtata
     1861 caagaaagtt gatcaattct ttaatacctt caagcttgtt tctttgcaat agatatgcta
     1921 taatgatcaa ggcatgacca atacctcgtc ttcttattgc ttcaaaaggt gaatttttaa
     1981 taacttcctt tgcaatcttt tttccttgtt cataattgcc atcatttatc aaatcttgta
     2041 caagtaaaag tttagtattt attttgactt ctcgttctaa tgtatttttc aataaccgtt
     2101 tgcttacaga tattgcttta tcatattgaa atgtataatt agaatataat gtgtgtaatt
     2161 tgttaagagc agatatatta ttttgatcac ttttaagagc atcgttatag cttttttctg
     2221 cttctgggta attttctagc tccataaata tatcaccttt tttaattatg gtgtctataa
     2281 caaatggagg attttttgct attaccaaat caaaaagctg aattgcatca tcatattttc
     2341 taagtttctc taaagctaaa ccttttgcat ttaatgcctc aatattgtca ggatccttct
     2401 ctattacttt atcatagcat tcaatagctt cttcatattt gtttagtttg tagagtataa
     2461 ctcctttatt taataaagta ttaaatttat tttttgtatc tattgttagt agaatatcat
     2521 aataaagtag agcttcttca tatttatgta agttttgata ctctgtagcc tttttcttca
     2581 catcatttat ttcttttaaa tatttttctg aaaccatatt gtagtactgt tctgcttctt
     2641 catgtctgtc tagactctca agggacaaac cttttccatt cagtgcttca atattgtcag
     2701 gatccttctc tattacttta tcatagcatt caatagcttc ttcatatctg ccaagtctat
     2761 caagagactg accttttgcg ttatatacat tagtactgtt tgaatctatc tctattactt
     2821 tatcatagca ttttatagct tctttgtatt ctcctaaatt gctaagagca agtcctttgt
     2881 tataaaatgc aatgatattt tttgaatctc tttctagtac ccgatcatat gattttatag
     2941 cttcttgaaa tttaaataaa taatttagaa catcaccttt actattccat gcaagaagat
     3001 tattgggatt tatctctatt actttatcat agcattttat agcttctttg tattctccta
     3061 aattgctaag agcaagtcct ttgttatacc atgcatctat attatttgga ttaagtttta
     3121 tagaaacatt ataacaatct attgacttat tatacagaga ttctaatttt tcctttgcat
     3181 attttgactt tgacttttca taatgtgatt tataataatt tcctctttct aatagatcct
     3241 ttcctaattt tactcatgat ttaggatcta atagactatt ttctatatta cgtatatcta
     3301 aatgtaattt ttcatcttct gtaacaattt tatcaatata aaaatattcc attttatata
     3361 tttcctacag taaatggttt tgatgttcta ttcgtaccaa atgctgctcg cagttttgca
     3421 attaaaattt taagatttcg atcatctggt gattcaaata ttgtctttct tctaatttca
     3481 gaagataaat atattaaaat ttgcagtttc aactgatcga ttttttttaa ttcattaaag
     3541 gataagctat caaatagata tggtaattct atatcataaa gatcggattg aatttcatta
     3601 attttgagtc tagcaaccat catattatta tttatccatt ccattgcaaa ttgtttatac
     3661 atatttaaag catcatctat tatagtttga agcctaggta tctctttatt atttggatca
     3721 aggttaatta attcataaac tttttttgct gcattatcta tgccttgtat gtctataaga
     3781 tttgttgatg aatctttgat tgagaaaaaa ttctcagcag cttttattaa atatgatatt
     3841 ttagcattaa attctttctt agagattgca atttttatat tttcaatatt agatgcttca
     3901 gccatataat acataggtgt ttgtttattt tcagctaaca tttgattttc tatatatttt
     3961 ctaagacttt ctatggtgat aatcccagta tctgaatttg ctgcctttcc atctaatcct
     4021 tctattagat gaaaagaaaa tgctccatga gtatgaggag gatcattgct attaatatga
     4081 atacaattat ttttttctct tgaaacttta ttgggctcac ttgatgctaa aacgatctta
     4141 cccctaccga tatttgcatc taaagcagta acgtcagtat ctgatgattt aattagatct
     4201 tttgcgttat taagaaggaa tcaaaatatt ctgaaaatat aactaatttt tataaatttt
     4261 ataaatgtaa taacattatt ctcttttatc ttagatcaaa tatgtaattt tttaaatggt
     4321 tgctaattac gcaa
//
LOCUS       DATIAS010000581         2229 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_785246, whole genome shotgun sequence.
ACCESSION   DATIAS010000581 DATIAS010000000
VERSION     DATIAS010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785246"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VLA74_11750"
     CDS             <1..828
                     /locus_tag="VLA74_11750"
                     /inference="COORDINATES: protein motif:HMM:NF019642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF51425.1"
                     /translation="NILIKKQGKSKSPNQIELTLMEKNKVEGTDVMSFKFSKHVEDYD
                     VRKKTLLLDYNAGQFAFFDIGEVYNDPKGPIRHFTISSSPTENFIMFSTRIRDSPYKK
                     RLANLEKGTKIKLRGPEGQFVLHQNYTNTAVFLSGGIGVTPFRSMIKYATDMQLPVKI
                     IMFDSNRNRNNILFKKEFDEWAGVNQNLKIIYTISEKEQKDEQSSSSLSTTNDWKGEY
                     GRINKAMILKYLNTNVLNNSIFYICGPPSMLKAMQNLLQEDLEIPKERIKVEEFTGY"
     gene            1255..1860
                     /locus_tag="VLA74_11755"
     CDS             1255..1860
                     /locus_tag="VLA74_11755"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSF51426.1"
                     /translation="MNLTRKILIFAIFAVLSTNTILNNSTAFVVINEVFAATNNNMGF
                     GANTLVSNNTALVKPPSLEEEHKEIHEKLEKIVSSSGDTANMAKQVQSIMQPHFEKEE
                     QLSIPVLGALQPYVNGTLTEETRNQVIKISQQFKQEYPSMLEEHKQIVAALDNLENIA
                     MKENRQDVISFIAELKSHAMNEEQVTYPATMVVGELLELKK"
BASE COUNT          833 a          315 c          356 g          725 t
ORIGIN      
        1 aatatactaa taaagaaaca aggtaaaagt aaatccccca atcagattga gctaactttg
       61 atggaaaaga ataaagttga aggtactgat gtaatgtcat ttaagtttag taagcatgtt
      121 gaggattatg atgtacgaaa aaaaacacta ttattagatt ataatgctgg tcaatttgcc
      181 ttttttgata taggcgaagt ttataatgat cccaaaggtc caattagaca ctttactatt
      241 tcatcttctc ccacggagaa ttttataatg ttcagcaccc gaattagaga ttctccatac
      301 aaaaaaagac ttgcaaattt agagaagggt accaaaatca agctgagagg tcctgaagga
      361 caatttgtat tacatcaaaa ttacacaaat actgctgtat ttctttctgg tgggataggt
      421 gttactccat ttagaagtat gataaagtat gccacagaca tgcaattgcc agtaaaaata
      481 ataatgtttg attccaatag gaatcgtaac aacatactat tcaaaaaaga gtttgatgaa
      541 tgggcaggtg ttaatcaaaa tttaaagatt atctatacta ttagtgaaaa agaacaaaag
      601 gacgaacaat catcatcatc gttatcaact acaaacgatt ggaaaggaga gtatggaaga
      661 ataaacaaag caatgatttt aaagtatcta aacactaacg ttctaaataa ttcaatattc
      721 tatatttgtg gtcctcctag tatgctaaaa gctatgcaaa atttgcttca agaagattta
      781 gaaattccaa aagaaagaat caaagttgaa gagtttaccg gttactgata tgaaaaatta
      841 ctaatgttca acttatcaga ttattatgac aacttgttat agtcattcta tagatatctt
      901 tactttctat cctgttcctc atttaacttt tgagcatcca atatgtgtct gttgttattt
      961 cttttttagt catgtcaaag atataattca ataaacaata attcaaaatg agttttaaac
     1021 taaacaataa tattccgaag agatatgtct atagacattt attattatga gaaataataa
     1081 aatctttttt ggaacttaga tttcatgcaa agaaaaaaat agttatctgc attttagata
     1141 attattattg tcttccttga atcgatttta gtatttatag cattgatctc ccacaatagt
     1201 ttcaggcagc aacttaacag aatctttata taatttcctt ataattggtt tacaatgaat
     1261 ctaacaagaa aaatcttaat atttgctata ttcgcagtct tatccacaaa tacaatatta
     1321 aacaatagta ctgcctttgt agttattaat gaagtttttg cagcaacaaa taataatatg
     1381 ggttttggtg ctaatacttt ggtatcaaat aatactgcac tagtaaaacc tccatcttta
     1441 gaggaagaac ataaagaaat acatgaaaag ttagagaaaa tagtgtcatc ttcaggagat
     1501 acagcaaata tggcaaagca agtacaatcc ataatgcaac ctcattttga aaaagaagaa
     1561 caattgtcaa ttccagtact gggagcgtta caaccatatg ttaatggaac attaactgaa
     1621 gagactcgaa atcaagtaat aaaaatatct caacagttca agcaggagta tcctagtatg
     1681 cttgaggagc ataaacaaat agttgctgca ctagacaacc tggaaaatat tgctatgaaa
     1741 gagaatagac aagatgtaat atccttcatt gcggagctta agagccatgc aatgaacgaa
     1801 gagcaagtaa catatcctgc cacaatggtt gtaggagagt tacttgagtt aaagaaataa
     1861 aaaatctgtc agttctatct tcaatatatt agctggtcta tttatctcaa atccaaataa
     1921 ttctgcatca tttatacatt ttttctatac gatagtatta tcatttcttg agttatttga
     1981 atatgtattt caccttaaca agatgcaaat gatagatgat actatggaaa cgctggaagg
     2041 tctttatgga aacgattatg acaataccga agtttagaag tatttggctc aagacgaagg
     2101 aatctcatct agataaggat ttggaaagtt tattgattct tttgctctgt tgcatgattc
     2161 attaatttat tgataataat tctttggttg aagttttttt tatgttgtga tataaataaa
     2221 ttgtatagc
//
LOCUS       DATIAS010000582         2455 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1467410, whole genome shotgun sequence.
ACCESSION   DATIAS010000582 DATIAS010000000
VERSION     DATIAS010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1467410"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VLA74_11760"
     CDS             complement(<1..284)
                     /locus_tag="VLA74_11760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51427.1"
                     /translation="MSTFDIHAIELDIVYNAYGFHDPNGRMYVLEEDKDEILQKVAQN
                     PGKNIPEVQPLTIRTNIGQCVEIKFTNDLSNEYASIHPTGLGLDPNKSDGS"
     gene            complement(281..562)
                     /locus_tag="VLA74_11765"
     CDS             complement(281..562)
                     /locus_tag="VLA74_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51428.1"
                     /translation="MYSDVKILLSLIFTFLLVTGSIPFSSIAQAFAQSYENNKGYDND
                     KLPDYIQKYKLPNGFNQPTPDNPWPDEIIPKNFPLRDACLDGKKFHINS"
     gene            complement(1198..2010)
                     /locus_tag="VLA74_11770"
     CDS             complement(1198..2010)
                     /locus_tag="VLA74_11770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51429.1"
                     /translation="MKIPFNPHTFFINNEKQTIIVKVIRVRSDTGIMKLMRIHSLCLI
                     STVTIIVISILPITTTTSLSFYDKKPSNQLQNSILEQQPIKVQNVLTQFEEQQKQYQG
                     NQSTKIYKDETYGIEFEYPSTVDILEDRLLTMLDLQLAHVFFEGQFKLPYLTLKLYSL
                     SPNEKTLNDFTSRIVKMKESSELLNNNVSILRFEATTLAGKPAHELEYIDKYYMAPEN
                     NTSSKKAETRSLSIWTIENNQAYELEFTGTVEKYKKHLPSAERIIKSFKIYK"
     gene            complement(2076..2300)
                     /locus_tag="VLA74_11775"
     CDS             complement(2076..2300)
                     /locus_tag="VLA74_11775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51430.1"
                     /translation="MMWEEYNKQKGPWKRVQILKDIAQVQPYLSSYYDATSYVINNKN
                     KTDKKEEEIERMKIGEEIYRKQMERAVFYY"
BASE COUNT          827 a          348 c          338 g          942 t
ORIGIN      
        1 gatccgtccg atttatttgg atccaagcct aatcctgttg gatgtattga tgcatattca
       61 ttacttagat catttgtaaa ttttatttct acacattgtc ctatattagt acgaattgtg
      121 agaggttgaa cttcaggtat atttttacca ggattttgtg caactttttg taaaatttca
      181 tccttgtctt cctctaaaac atacattctg ccgttaggat catgaaagcc ataagcgttg
      241 taaactatat ctaattctat ggcatggata tcaaatgtac tcaagaattt atgtggaatt
      301 tttttccatc taaacatgca tcacgtagag gaaaattttt tggaataatt tcatctggcc
      361 atggattgtc gggtgttggt tgattgaaac catttggtaa tttatacttc tgtatataat
      421 ctggtaactt gtcattatca taacctttat tgttttcata tgattgtgca aaagcttgtg
      481 ctatagaact gaatggtatt gaacctgtaa caagaagaaa agtaaaaatc aatgatagta
      541 gaatttttac atcactatac aatgatatta atctctctcc ttattctaca agactcatca
      601 tttactttcc tgaattgttc caaaacaaat aacataagtc aacaatagta attgtgctta
      661 ttaagattgc ttatgattat tatgatacct aatattagat acactataaa aagaaattca
      721 tagtaaacta tttcttaagg atgtataaag aaaaaaatac ataaaatgaa cttaaaacaa
      781 tcatcactat tatatttgtt attctgtcca tatactgata atcatttata gatgagtttt
      841 aaaaaaattt atagaaacat tttcttctaa cacattattt ataattaatt ttggaaagtc
      901 ataaaactga aaacaaatag aaggcatata aagattagat tcagattatt acagttatca
      961 ttgattctta ctgtattatt tgtaaaagtt ccttcaagaa aatgatataa taaaaacatt
     1021 agaaaagcta atcttgtaca tcattatcta aaagaaggat tataaaatta ctaggtcata
     1081 gttcttgtac attttagcaa tatgccggac tttataataa aaaaccatta ttactactat
     1141 gttaaagatt gatatgaatc ttttattata agtattgttg tagtgtatcc atatagatta
     1201 tttataaatc ttgaaagatt taattattct ttcagctgaa ggtagatgtt ttttatattt
     1261 ttcaaccgtt cctgtaaact ctagttcgta tgcttgatta ttctctatag tccatatact
     1321 caaactcctt gtttcagcct tctttgaact agtgttgttt tcaggggcca tgtaatattt
     1381 atcaatatat tctagttcat gagcaggttt tcctgcaagt gtagttgctt caaatcttaa
     1441 aatagacaca ttattattta aaagttcaga ggattccttc atttttacaa ttctagaggt
     1501 aaaatcattc aaagtttttt catttggaga taaagaataa agttttaagg ttaaatatgg
     1561 caacttaaac tgaccttcaa aaaaaacatg tgctaactga agatctaaca ttgtgagaag
     1621 ccgatcttct aatatatcaa cagttgaagg atattcaaat tcaattccat aagtttcatc
     1681 tttatatatt tttgtagatt gatttccttg atattgtttt tgttgctctt caaattgtgt
     1741 gagcacattt tgtactttaa taggttgctg ttccaaaata gaattttgta attgatttga
     1801 tggtttctta tcgtagaaag ataaagacgt agtagtagta ataggcagaa tagatattac
     1861 aataattgtg acagtagaaa tcaagcataa agaatgtatt ctcatcaatt tcatgatccc
     1921 agtatctgat ctcaccctaa ttactttaac gataatagtt tgcttttcat tatttataaa
     1981 aaaagtatga ggattgaaag gaatcttcat ttacgtcgaa gggtttccat tttcctggtt
     2041 ttaatcaact attatagaat taaaagcttc aattcctaat aatagaatac agctcgttcc
     2101 atctgttttc tatagatttc ttcccctatt ttcattcttt ctatttcttc ttctttttta
     2161 tctgttttat ttttattatt gatgacataa ctagtagcat cataatatga agataagtaa
     2221 ggttggacct gagctatatc ctttaggatt tgaactctct tccagggacc tttttgttta
     2281 ttgtattctt cccacatcat tttttctatt agtttaagtc catctattct ctctaaatgc
     2341 tgctgctagt cttttcaaat caaatttatt aataaaataa tataagcact acaataacaa
     2401 aataataatg atgttgtaga acaatgagca atagatcagt aaaagtagaa ttacc
//
LOCUS       DATIAS010000583         2671 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_923062, whole genome shotgun sequence.
ACCESSION   DATIAS010000583 DATIAS010000000
VERSION     DATIAS010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2671
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_923062"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VLA74_11780"
     CDS             <1..455
                     /locus_tag="VLA74_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51431.1"
                     /translation="LSASKVVVGESFDLTIIATNNGDTADMQLVSLSFPNITSIDSIV
                     KILKYTFTQKPVFIKMGDKVGSEYVGVNKVINAYYPAIEANSRPWYNDDYYQISVEVK
                     PNNVGRFVIFVKTIALPHTNELGHYPIFSIKDYQGEFVVLSSVEVVNK"
     gene            518..1765
                     /locus_tag="VLA74_11785"
     CDS             518..1765
                     /locus_tag="VLA74_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51432.1"
                     /translation="MKKRFYFRRGASDNNTKNQKYGNNNDRTIVESSYFYKRLINRFL
                     VGCILVSTGILLSNSGGSWDITNHLLNKPETFFSSPHVILYSGIVLALIGTTIMFLYW
                     RSYSIYISTIKGEKNLKLDLSIKMVITGISMLILAGPLDFSWHSAFGLDGLLSPPHLT
                     LTIGMLAGSIGSLIGITSYIVINNSISQEKRRDNNIDTFKKNEGISISIYTTLTIIGI
                     LPIWMSSSGLIYMFSLPFSDTEYYNFNLEPTTAATIATVSFPFLISFILVSLFKLIEE
                     MGNKKRKFGAISVTGSIFIIITIVTMMIPNKSLISTIPFYVLNIIPIIMADIFLSKLP
                     LKRVFVYTSGGILGSSFFMLYYPMITHIYNEVLSNQPVWPSLTASVYFDMIIQIYPLL
                     AVPAIGVGILGTIFSHRLINRKN"
     gene            complement(2437..>2671)
                     /locus_tag="VLA74_11790"
     CDS             complement(2437..>2671)
                     /locus_tag="VLA74_11790"
                     /inference="COORDINATES: protein motif:HMM:NF016341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008193 - tRNA guanylyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA(His) guanylyltransferase Thg1 family
                     protein"
                     /protein_id="HSF51433.1"
                     /translation="LTRSDLKLKLFDETIRNCMIETVKHLMDNTGFKCVFGFTQSDEI
                     SILFDSCYQVINNTFAGKIRKFILILLQNYMII"
BASE COUNT          916 a          369 c          365 g         1021 t
ORIGIN      
        1 aattatctgc atcgaaagta gttgttggag aaagctttga tttaacaata attgcaacta
       61 acaatggaga tactgcagat atgcaacttg tttccttgtc ttttcctaat attacttcta
      121 tagatagtat agttaaaata ttgaaataca cctttactca aaaacctgta ttcatcaaaa
      181 tgggtgataa agtaggctcg gaatacgtag gagttaataa ggtaattaat gcatattatc
      241 cagctataga agctaatagt agaccttggt acaatgatga ctattaccaa ataagtgtag
      301 aagtaaaacc gaataatgtt ggaagatttg taatatttgt aaaaactata gcattacccc
      361 ataccaatga gttaggtcat tatcctatat ttagtattaa agattatcaa ggagaattcg
      421 ttgttttatc ttctgtagaa gtagtgaata aataaaaaaa gaggaaataa taaataatat
      481 caatgaaaaa tataatagtt aattatcgac atctgatatg aaaaagagat tttattttag
      541 acgaggagct tctgataata atactaaaaa tcaaaaatat ggcaataata atgatagaac
      601 tattgtagaa tcttcatatt tctataagcg gttaataaat aggtttttgg ttggttgtat
      661 cttagttagt accggtattt tactctctaa tagtggtggt agttgggata taacaaatca
      721 ccttttaaat aaacctgaaa cctttttctc ttctccacat gttatattat atagcggaat
      781 agttctagcc ctaataggaa ctacaattat gtttctatat tggaggtcat attctattta
      841 tatttctact ataaaaggag aaaaaaatct taaattggat ttgtcaataa aaatggtaat
      901 taccggtatt tctatgttga tattagctgg accacttgat ttttcttggc attcagcttt
      961 cggtttagat ggtttgctaa gtccaccaca tcttacttta acaattggga tgttagcagg
     1021 cagtattgga tctctgatag gaataacatc atatattgtc atcaacaata gtattagtca
     1081 agagaaaaga cgggataata atattgacac ttttaagaaa aatgaaggaa tttcaatttc
     1141 aatatataca acattaacta ttatcggaat attaccaatt tggatgtcat catcaggatt
     1201 aatttacatg ttctcattac ctttttcaga tacagaatac tataacttta acttagaacc
     1261 cactactgca gccactatag ctactgtaag cttcccattt ttaatatcat ttattttagt
     1321 atcattattc aaactcatcg aagaaatggg taacaaaaag agaaagtttg gtgccatatc
     1381 tgtcactggt tcaattttta ttattattac aatagttaca atgatgattc caaataaatc
     1441 gttgatatct acaattccat tctatgtact taatatcatt cctattataa tggctgatat
     1501 atttttatca aagctaccat taaagagagt atttgtttat acatcaggag ggattcttgg
     1561 ttcttcattt ttcatgcttt attatccaat gataactcat atctataatg aagtcttatc
     1621 taatcaacct gtatggccta gtcttactgc ttctgtatat tttgacatga ttatccaaat
     1681 ttatccttta ctagccgtac ccgctattgg agtaggaatt ttggggacaa tttttagtca
     1741 tagattaatt aacagaaaaa attgatgata tagatcttat tacctcttac ttccgtttgt
     1801 gagttatata tttactcact ttcgtttcgt acaatttatg taatccagta ttattattat
     1861 aagaaatgcc caggatttca gatctaaatt attctgttcg tttactttga atttttccca
     1921 ctttggtaag cataaattct atttctatat taaggaaatt ttttttctag aatcttagat
     1981 ttgattttat taattcaagc tttggttatc ttttatctaa cagtcttaag ttctattaca
     2041 atagtcattg aatatgtaaa ggaaatgtta tttcctgcta tatagtatag ggagtaagtt
     2101 attttttaat ttgataatat tagatttcat ataatgtttg aaagtttatc atctggatca
     2161 aatccaatag ttgctatatc aatatgttga atcatgctat tacacagtat aacaattcct
     2221 tttttagtag ttggattaaa agcaactatg ctattataac tattaactag gctattatat
     2281 caaattattt gtgaaccaaa attagtaatc ttcttgtcta aatgcttctt ttaatacatt
     2341 acataattat ctttagatct attgttcatt tcttattact agtaatttgt ttcccttttt
     2401 tgttattatt attctctttt atctttgaag ttacaattat attatcatat aattttgcaa
     2461 taatattaga ataaactttc taatcttacc agcaaaagta ttatttatta cttgataaca
     2521 agaatcaaac aaaatagaaa tttcatctga ttgagtaaaa ccaaaaacac atttaaaacc
     2581 tgtattatcc atcaaatgct ttacagtttc aatcatacaa tttctaatag tttcgtcaaa
     2641 tagttttaat ttcaaatctg atcttgttag t
//
LOCUS       DATIAS010000584         2093 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1059622, whole genome shotgun sequence.
ACCESSION   DATIAS010000584 DATIAS010000000
VERSION     DATIAS010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1059622"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VLA74_11795"
     CDS             <1..191
                     /locus_tag="VLA74_11795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51434.1"
                     /translation="ESYNTELLFQLLLLLLWLILIFQNIIVTYFKNSSHLPSLIIMQD
                     LFIKVAICYLEFNYIQFT"
     gene            complement(1095..1439)
                     /locus_tag="VLA74_11800"
     CDS             complement(1095..1439)
                     /locus_tag="VLA74_11800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51435.1"
                     /translation="MLIAEKFIRSLVSNYGKHTVYTDGGTWYDEACNIIGLKHYLHSP
                     LEKSLMERVNQYFKDRIECFDDYYPCMQKEECNLFHVYNWIQFFVSIYNDTTFENYFI
                     NELNKRGEYVLN"
     gene            1883..>2093
                     /locus_tag="VLA74_11805"
     CDS             1883..>2093
                     /locus_tag="VLA74_11805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51436.1"
                     /translation="MKFKYSKNSEELVKLLKEYVQESSFCIYASKLNGDFDWVCHFVF
                     DSIEQYEIESINFLNRFGELITDFRT"
BASE COUNT          767 a          291 c          271 g          764 t
ORIGIN      
        1 atgaaagtta taatactgaa ttattatttc aattattatt attgttatta tggctaatcc
       61 tcatatttca aaacataatt gtaacatatt tcaaaaattc ttctcattta ccatctttaa
      121 tcatcatgca agatcttttt atcaaagttg ctatatgtta tctagaattc aattatattc
      181 aatttacata atagattaga aattttataa aatgttatta tgtaaataag tgttacagag
      241 gctacaatat ataacaccca attggtgcga ataatgattt tattatctga taagaaaaaa
      301 attgtcattt ttagttagtt agtgagtgag ttagtaggga aggaaaaaca gtaaaataac
      361 aaaagcaatt gcagccagtg ctgacagaat tacaagagta gtcgacttca tagtataata
      421 ttatatattg tattatttta aatataagat tttttatttt atcggattct ttataacaat
      481 aacaataata attagataga tgttatacag aggctacaat atataacacc cctacagtga
      541 acaacaactt tctacaagat ttggaaggaa tacgaaacta gtagcatgta taatatcata
      601 atataataac ataaataaag attaaaattc aattttgcag tattgttttt acctaattta
      661 tatccaaaaa agattctata attattattc ttgactggtt gattatctca tataacattc
      721 attgcttacc aaattgtatt ttacaaagaa tagtaaagta ggtggatgcc atccaatggc
      781 tacttttttt tgttattgag attcaatcat agcaaacagt aaattgttat tatattcttt
      841 ctttgatgac cttacagaat aagaatcacc acattccaca ttttcttttt cttgaattgc
      901 cttcttttaa tggatcaaat tgatatgagc aatttctaca ttttattaat ttgatattca
      961 tagattagta tggcaatatg gcaataatga atgttatggc agtatggctt cacatctaat
     1021 aataaatata aaatgatgta aatataagta gatggagaaa gaattagaat tattggtaga
     1081 taataaaggc tctgttaatt taagacatat tcacctcttt tattcaattc gttaataaaa
     1141 taattctcaa atgttgtatc attatatata gatacaaaga attgtatcca gttatataca
     1201 tgaaatagat tacattcctc tttttgcata cacggatagt aatcatcaaa acattctatt
     1261 ctgtccttga agtactggtt gactctttcc atcaaacttt tctctaatgg tgaatgcaaa
     1321 taatgtttta atccaattat gttacatgct tcatcatacc atgtaccacc atcagtatag
     1381 acagtatgtt ttccatagtt tgatacaaga gatctaatga acttttcagc aataagcatg
     1441 tttctctctt ctgaaatata gattccaagc tctgaagagt gaataggttc aatacagaac
     1501 tataaccaaa agtgttggct accaatatgt ataacagttt catctattac aaatgcagat
     1561 actcttttcc ttttatagat ctgcaaagaa ccaacctctg aatccagttc cagacagaca
     1621 cgtaacttct tttctgatcc ttaaaaattg ttagtgcttt agatgtattt cttaaactca
     1681 aaccaagaaa atacaaatac aaaaagaata cattactaca atagtggatg ttctgtttct
     1741 cataaatttg accaacatgt atgttagaat aggacattca cagataaatt catttttgtt
     1801 aaattaacag gtcctcctgg gctattcatc tatattaaat cctaaactaa caacaaataa
     1861 taaagtaaat cgtactattc ttttgaaatt taaatattca aaaaattctg aagaacttgt
     1921 caaacttttg aaggaatatg tgcaagaatc ttcattctgc atatatgcta gtaaattaaa
     1981 tggtgacttt gattgggtat gtcattttgt attcgattct attgaacaat atgaaattga
     2041 atcgataaat tttcttaata gatttggtga actaattact gattttagaa cat
//
LOCUS       DATIAS010000585         3071 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_105761, whole genome shotgun sequence.
ACCESSION   DATIAS010000585 DATIAS010000000
VERSION     DATIAS010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105761"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1093)
                     /locus_tag="VLA74_11810"
     CDS             complement(164..1093)
                     /locus_tag="VLA74_11810"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HSF51437.1"
                     /translation="MKIGLVVPQFGINATKENLTRFVQIAEQEGFESLWVYDRMLYAI
                     NPQQPYPGTPDKREWPEFFKNNLDPLATLAFIAANTTKVNLGTCIIDMTFHNPITLAK
                     EFTTIDILSEGRTICGFGIGWSKDEYLAANIPYEKRGERANEILQAMKNVWTEDIVEF
                     NGDFYKIPKSIIDPKPIQKPHPKILLGGFSPKTFERMIKYGDGYIGTLAGSFDYFHNS
                     IKMFNDSIEKSSRTRRDFDLTVLTFPYLVKTSSEKKSNRSPMTGRTIDEIGYDLSVLE
                     RSGVDRVILAVNAEKDYDVNESIEFVKELIKFC"
     gene            complement(1155..1670)
                     /locus_tag="VLA74_11815"
     CDS             complement(1155..1670)
                     /locus_tag="VLA74_11815"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSF51438.1"
                     /translation="MIGKRFDHIEKYNYKFFIDLCYSNRLIQNRKILENLNNSKIARL
                     ATVDPEISQPYLIPVVFVFDGNNIFIPIDDKPKTVNSNQLKRVKNIQKNPNVSFLIDT
                     YEDKDWSNLSYLMIQGKARIVNRLKDTDTIEKAHSLLSEKYLQYKKMVGIGDICIIID
                     IQKTINWKYSS"
     gene            2111..>3071
                     /locus_tag="VLA74_11820"
     CDS             2111..>3071
                     /locus_tag="VLA74_11820"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HSF51439.1"
                     /translation="MATAKQILILGAGFGGLASANLLRKSLQKEECQITVIDKNQYFM
                     MGLVNLWILNGTRRLENSQVALKKLEAKGIKFLNDEIIRIDPSKNSVTTKTNHNKLQY
                     DYLIISLGAELAPKRIDGFENNGSCFNIYDAQQVPSLREKILSLTSGRIVICIADIPY
                     KCPPAPYEVSLLINDILIKNETRDSIDLDIYVPTPISLPVAGPNMSQDVVNLLNDNHI
                     NFHPLHKIKKVLDKKTIQFENGSKTSYDVLVLIPPHQVPQIIKNSDLLGDGDQHWINV
                     DKFTLRTKYKNVFAIGDVTEIRLDKTTTIPKAGIFAEGEAKVVS"
BASE COUNT         1063 a          493 c          442 g         1073 t
ORIGIN      
        1 gttttcaaac ttcatacgat caatatgtta ttttaagacg gttaaaagca gttatggatt
       61 atgaaacaaa taagtttgat tctataaata gctccaaaat tctaatacat agagaatatc
      121 cttttacatc attgataaaa ataatttgtg tgtttgacaa ctattaacag aattttatta
      181 gttctttaac aaattcaata gattcattta catcataatc cttttctgca ttcacagcaa
      241 gaattaccct gtctacgcca gatctttcga gcacggataa atcataacca atttcatcaa
      301 tcgttcgtcc agtcatagga gaccgattac tttttttttc agagctagtt ttcacaagat
      361 atggaaatgt tagaacagtt agatcaaaat cccttctagt tcttgaactt ttttcaatag
      421 aatcattgaa cattttaatt gaattgtgaa agtaatcaaa agatcctgct aaggttccta
      481 tataaccatc tccatatttt atcatacgct caaacgtctt tggcgagaaa ccccctagca
      541 aaattttagg gtgaggtttt tgaataggtt ttggatcaat tattgatttt ggtattttgt
      601 aaaagtctcc attaaattct acaatatctt ctgtccatac atttttcata gcttgaagaa
      661 tttcgtttgc tctttctcct cttttctcat aaggaatatt agcggcaaga tactcatctt
      721 ttgaccaacc aataccaaaa ccacagattg tcctaccttc agataaaatg tctattgtag
      781 taaattcttt agcaagtgtt ataggattat gaaaagtcat gtcaataata caagttccta
      841 aatttacctt tgtagtattg gctgcaataa atgctaatgt tgctaatgga tccaaattat
      901 tcttaaaaaa ttcaggccat tctcttttat ctggagttcc cgggtatggt tgctgaggat
      961 taatagcata taacattcta tcatataccc aaagtgattc aaatccttct tgttctgcaa
     1021 tttgaacaaa tctagttaga ttttctttag tagcatttat gccaaattga gggacaacta
     1081 atcctatttt catatccatt attaattttt atactataaa gacataatgt aatcaatatt
     1141 agtatatatt tttcttaact ggaatatttc cagtttatag tcttttgaat atcaattata
     1201 atacagatgt ctccaattcc taccattttt ttatattgaa gatatttttc tgacaataat
     1261 gaatgagctt tttctattgt atctgtatct tttaacctat ttactattct tgctttacct
     1321 tgtatcatca aataagaaag attactccag tctttatctt catatgtatc aattagaaaa
     1381 gaaacattag gatttttttg tatatttttt actcttttta actggtttga atttactgtt
     1441 ttaggtttgt catctattgg aatgaagata ttattaccat caaatacaaa taccacgggt
     1501 attaagtaag gttgactaat ctcaggatct actgttgcta atctggctat ttttgaattg
     1561 ttcaaatttt ctaatatttt tctgttttgt atcaatctat tgctatagca aagatctata
     1621 aaaaatttat agttatattt ttctatatga tcaaatcttt tacctatcac ttagatagaa
     1681 aaataaatta atataaaaca taatagatgt tatctgtttt atccttttga atagattgat
     1741 tcaatacttc caaattggta cattgaatat gtgacctgca ttatttactt tataagagtt
     1801 aaaaggtggc agataactta aaatgggttc agtaatatta ttcagctaaa tgtgtgagat
     1861 ttgaaccctt ctataaagtg ggaccagtta atatttttta ttgtattgct aatttaatag
     1921 attatcaata ataaatcagt tatatcaaat tctcaaggtc tgaattgtac ccaatctagt
     1981 gcactagtta aataactatc aaacaagcaa cataactgat cctctgcatc tagtaatatc
     2041 acgaaattct taggtcatca atccaatgct ccatatacaa atatacaatc tatgcaatta
     2101 ttatcattaa gtggctacag caaaacaaat cttaatttta ggagcaggtt ttggaggatt
     2161 ggcatcagcc aacttattac gaaagagtct tcaaaaggaa gagtgtcaaa ttactgtcat
     2221 tgacaagaac cagtatttta tgatgggcct tgtgaactta tggatactaa atggaactag
     2281 aagattggag aattcccaag ttgctctgaa aaagctagaa gctaaaggaa ttaaattttt
     2341 gaatgatgaa ataataagga tagatccatc taaaaatagc gttactacta aaaccaacca
     2401 taataaatta caatacgatt atttgataat atcactaggt gcagaacttg caccaaaacg
     2461 aatcgatgga tttgaaaata atggaagttg ttttaacata tatgatgctc agcaagtccc
     2521 aagtctgcga gaaaaaatac tttctctaac aagtggtcgt atagtaatct gtatagcgga
     2581 tattccatat aaatgcccgc cagcacctta tgaggtgtca ttattgatca atgatatatt
     2641 gattaaaaat gaaacaagag attccattga tttggatata tacgtaccaa caccaatttc
     2701 attacctgta gctggaccaa atatgagtca agatgttgtc aacctgctta atgataacca
     2761 catcaatttc catcctctac ataaaataaa aaaagtatta gataaaaaaa caatacaatt
     2821 tgaaaatggc agtaagacaa gctatgacgt attagtacta attcctcctc atcaagttcc
     2881 tcaaatcatc aagaattctg atctgttagg agatggcgat caacattgga taaatgttga
     2941 caaatttacc cttagaacaa aatacaagaa tgtctttgca ataggcgacg taaccgagat
     3001 tagacttgat aaaaccacaa ccatccccaa agctggaata tttgcagagg gcgaagcaaa
     3061 ggtagtcagc c
//
LOCUS       DATIAS010000586         2952 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1468581, whole genome shotgun sequence.
ACCESSION   DATIAS010000586 DATIAS010000000
VERSION     DATIAS010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2952
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468581"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VLA74_11825"
     CDS             <1..745
                     /locus_tag="VLA74_11825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSF51440.1"
                     /translation="WVPQSGRITRSIVNENIERSLRRMSVNSLDLLQFHWWDYNNPYY
                     MDALKYLSDLMDEGRIKHLGLTNFDTERMQIIIDSGLQIVSNQVQYSIVDRRPEVKMI
                     PFCMEHNISLLAYGSICGGLVSERYLGRTELSTAELDTLSLRKYKKMIDAWGGWNLFQ
                     DLLLTLKKIAIKHDVSIANVATNYILAKPVIAGVIIGVRLGIVEHRNDNTQVFNFNLD
                     KSDRDAIDAVCAKANNLFETIGDCGDEYR"
     gene            1400..1534
                     /locus_tag="VLA74_11830"
     CDS             1400..1534
                     /locus_tag="VLA74_11830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51441.1"
                     /translation="MKYLSSIGILSMSLTLLTSSIIIVNAQITETSSMTNMTSPTLVN
                     "
     gene            1592..1960
                     /locus_tag="VLA74_11835"
     CDS             1592..1960
                     /locus_tag="VLA74_11835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51442.1"
                     /translation="MRISDIDKQEFEISWSGNATLREDIPVWDSGTVWTTLKDDGYWY
                     GKGYGMLITLDNKVAKYTFSTVGKMDDDGKLRNLGSVIFDTNDTGGGALSVLKNTIGV
                     LADEIDMKGNAITKIWKLNR"
     gene            2275..2610
                     /locus_tag="VLA74_11840"
     CDS             2275..2610
                     /locus_tag="VLA74_11840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51443.1"
                     /translation="MITNNFNDTNNNNNSDTYNVLPKQFLNYINYELSLFEKITNKKF
                     FFNIVSNDRFELSVYESRKEEEEENDNNNKSKYQVVYRANNLHQFIKRLFMIREHLIK
                     NFGNGITTQ"
     gene            complement(2715..>2952)
                     /locus_tag="VLA74_11845"
     CDS             complement(2715..>2952)
                     /locus_tag="VLA74_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSF51444.1"
                     /translation="YGQYGIRCNCIVPSTIRTPFLEPYLKDENAKKTLESSFPLQRIG
                     EPSDISNAILFLCSNKAKWITGAKIDIDGGITAK"
BASE COUNT         1096 a          366 c          484 g         1006 t
ORIGIN      
        1 atgggtacca caatcaggaa gaattacgcg ttctatcgtt aatgaaaata tagaaagatc
       61 gcttcgcaga atgagtgtta actcgttgga tttacttcaa ttccactggt gggattataa
      121 caatccgtat tacatggatg ctcttaaata cctatccgac ctcatggatg aaggacgaat
      181 taaacactta ggtcttacaa attttgatac tgaacgtatg cagatcataa tagattcggg
      241 tttacaaatt gtatcgaacc aggttcaata ttcaattgta gatcgaagac cagaagtgaa
      301 gatgatcccg ttttgtatgg agcataacat cagtcttctt gcttatggaa gcatctgtgg
      361 aggactggta tcagaacgct atttaggaag aacagagtta tctactgctg agttagatac
      421 attaagccta cgaaaataca aaaagatgat agatgcatgg ggcggatgga atttgtttca
      481 agatctttta ttgactttga agaaaattgc gataaagcac gatgtaagta ttgcaaatgt
      541 agcaaccaac tatattctcg ccaagcctgt aatagcagga gttattatcg gcgttagact
      601 tggaatagtt gagcacagaa acgataacac tcaggtattc aactttaatt tggacaagtc
      661 agatcgtgat gctatagatg ctgtatgtgc aaaggcaaat aacttgtttg agacaatcgg
      721 agattgtggc gatgaatata gatgatctgt ctttttgctt ctttgacttg taatgcatta
      781 ggtaatccta catgttgata agaaaccttg ttcgtagagt ttcatgtcat ctaaagcatt
      841 tggatagtga tcatttcaat tatcagtgct gctgtagaaa ataatctgat acttagtaac
      901 aaaatttatg atttcaataa tattttaaat tggtcacata ataaaaatgg cagttcaaaa
      961 ctagtttata tcgtgtaatt atatacatgg attcggtggt cttgcgggtc atttttgacc
     1021 tttattttat ttttatataa ctttttgaaa ttacatttaa tccttaataa atgataacaa
     1081 ggtaaaaggg tgccttgtct tctctatctg attagttagc agtcttaagt gaaagaatac
     1141 aacagttaga cagaaaacaa atgatataat aatataatta ctaaactttg tacaaataat
     1201 atcttaaatc tagatataga atttacatct caaatatata gtaaaacaga agtaataata
     1261 aacgaatttt tgattaagtc aatttactta taacctaaaa gcagtttata attcgacgat
     1321 aaaaaattat atctatctat attgttttta tttagtaaat ctacaaaata tattattcga
     1381 ggttttttaa taataaacaa tgaaatatct atcaagtatt ggaatattga gtatgtcact
     1441 gactttgctg acatcatcaa taattatcgt taatgcacag ataacggaga ctagtagtat
     1501 gactaatatg acaagtccaa cactagtcaa ttaggaactt tctgtaagta tagatgattt
     1561 aattttagaa tctaaaacgc aaagtgaagg aatgagaata tcggatattg ataaacaaga
     1621 atttgaaata tcttggtcag gtaatgcaac actgagagaa gatattcctg tgtgggattc
     1681 gggaacagtt tggactactt taaaggatga tggttattgg tatggtaaag gttatggaat
     1741 gctaataaca ttagataata aggtagcaaa atatactttt agtactgttg gaaaaatgga
     1801 tgatgacgga aaattaagaa acttaggatc tgttattttt gatacaaacg atacaggagg
     1861 aggcgcatta tctgtactaa aaaatacaat tggagtatta gcagatgaaa tagatatgaa
     1921 aggtaatgca ataaccaaga tatggaaatt aaatagataa ctctaatttt tttagttggt
     1981 ttttttgtag tatttttcag caatgatatt ttggaataaa atattcttca taaaaagttg
     2041 aatctaattc aacagtatta aattataaat ggatgtttta tttatagagt tttcaacaat
     2101 tttatcgagt gatatttcca attgtagttt tgttttgcta ttggtaggga atttacttct
     2161 ttctcatatc atgataattc aatatataac caaatgaaat ttatctacta tatccttcaa
     2221 cagtacataa tgatgatatt cattaaataa taataaaata ctataaaaaa attaatgata
     2281 accaataatt tcaatgatac caataataat aataattcag atacttacaa tgtacttcca
     2341 aaacaatttc tcaattacat aaattatgaa ttaagtttgt ttgaaaaaat taccaacaaa
     2401 aagtttttct ttaatattgt aagcaatgac agatttgaat taagtgtata tgaatcaaga
     2461 aaagaggaag aagaagaaaa tgataataat aacaaatcaa aatatcaagt agtctataga
     2521 gcaaataatc ttcatcaatt tatcaaaaga ttatttatga tcagagaaca tttaattaaa
     2581 aattttggta atggaataac aacacaataa ctagtaaaaa tattataatt tatcaaaaaa
     2641 aggaaaaaat ttgtattttt atttatttat ttattgcata ttgtatgatt tttatatttt
     2701 tcgtataatt gaaattattt tgctgttata cctccatcga tatcgatttt tgctcctgta
     2761 atccactttg ctttattaga acaaagaaac aaaatagcat tagaaatatc ggaaggttca
     2821 ccaattcttt gtagaggaaa tgacgattct aaagtttttt ttgcattttc atctttcagg
     2881 tatggttcaa gaaaaggagt tctaatagtt gatggtacta tacaattaca tcgaatacca
     2941 tactgtccat ac
//
LOCUS       DATIAS010000587         2927 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1740213, whole genome shotgun sequence.
ACCESSION   DATIAS010000587 DATIAS010000000
VERSION     DATIAS010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1740213"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..1817)
                     /locus_tag="VLA74_11850"
     CDS             complement(258..1817)
                     /locus_tag="VLA74_11850"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF51445.1"
                     /translation="MEDDNPDNYGISNFKKNGSNNMIPRSAWITLFILGSIDLISTAS
                     ETMIIPAIPDIIEDFGLTYSYSSWILSSFLISGAVMTPIAAKLSIIYGRKKVLLLLIM
                     LYIIGTLSAGFSPNMVFLIISRIIQGLSLAIFPIAFGIIQNVFPKDKLAIGQGIIIAL
                     FSSGSVIGLVIGGYIIEIFGWQTIFFTIIPFVIFIVLFIYKKIDVKDTLHKPMLIVDQ
                     NDAINNNDKTKNESNHISKIKDSYLQLLDLRGTISLAILISSFLIILTSLEKTSFSSY
                     SIIVPTFTLLAISCFILFIWFERKTNYPIIPLKIFKDKTLVYTNIFLMISGLTTFMIY
                     QMLPILVQNPEPVGFHGNAITVVQIQLPFMISLFIISTLSGFIVSRWGNIKPTILGSI
                     IGFIGFFSILLFHDSEISIGSSLVIVGVGISLMQVGGFNIITTYTPKKFSDISVGVTS
                     LLFIVGMSIGPAISASFLQNFLVKMEEIGIYPSLQAYDLIFFTAVMLSLIPLILIFLI
                     KKRIIKHGKSI"
     gene            complement(2086..2679)
                     /locus_tag="VLA74_11855"
     CDS             complement(2086..2679)
                     /locus_tag="VLA74_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvoyl-dependent arginine decarboxylase"
                     /protein_id="HSF51446.1"
                     /translation="MTKKSCSISNQVSNPFNYLPKAMFFTKGKGIHKDQLTSFELALR
                     DAKISDLNLVTVSSIKPPKCKVLSILEGRKYLLSGQITFAVMARSSTNEPNRLIAASV
                     GLANPKEEGKYGYLSEHHSTGETGQKAGDYAEDMAMEMLATTMGLPNDQSLKWDEKEE
                     QWRLSGRIYKTQNYTQSAEGHKDGLWTTVLSAAVFIL"
BASE COUNT         1053 a          455 c          440 g          979 t
ORIGIN      
        1 aatctattat agcgactggt cgcaaaatat ctacgaaaaa catcaattct atttttccta
       61 tccatatctc ctagctcggc tagagttgga aaatcaaatt ccaatagttt ctgactcatt
      121 aataacaaag tattgtgtaa atgtctctta aagtttttcc aattaatttt gatataaatt
      181 tttgaaaaag gattttaata attaaaagat acacgaaaga atttatggtc attgtaatgg
      241 atcgatatga cgtaaaatta aatagatttg ccatgtttaa taattctctt tttaatcaaa
      301 aatattaata tcagcggtat caaagacagc ataacagcag taaaaaatat tagatcatat
      361 gcttgtaaag atggatatat cccaatttct tccatcttaa ccaaaaaatt ttgtagaaaa
      421 gatgcagaaa ttgctggacc tattgacata cctacaataa atagcaatga agtcacccca
      481 acagaaatat cagagaattt ctttggagta tatgtagtaa ttatattaaa tccacccacc
      541 tgcatcaagg agattccaac ccctacaata actaaacttg accctatcga tatttctgaa
      601 tcatgaaata gcaaaataga aaagaatcct ataaatccaa taatactacc tagaatagta
      661 ggttttatgt ttccccatct agaaactata aatccagata aagtggatat aataaaaaga
      721 gagatcataa aaggaagttg tatctgtacg actgtaatcg cattaccgtg aaagccaact
      781 ggctctggat tctgaactag aattggtaac atttgataga tcataaatgt tgtcaatcca
      841 gagatcatca aaaaaatatt agtatagacc agtgtcttgt ctttgaaaat ttttaatggt
      901 ataatgggat aattcgtctt cctttcaaac caaataaata aaataaaaca ggaaattgct
      961 agcaaggtaa atgtaggtac aataatagag taagaactga aacttgtttt ttccagactt
     1021 gttaaaataa ttaaaaatga ggaaatcaaa atagcaagtg atatagttcc cctcaagtct
     1081 aaaagttgca gatatgaatc cttaatctta ctgatatgat tagattcatt tttcgttttg
     1141 tcgttattat taatagcatc attttgatct actatcaaca ttggtttgtg tagcgtgtct
     1201 ttcacatcta tttttttgta aataaaaaga acgataaaaa taacaaaagg tataatcgta
     1261 aagaatattg tctgccagcc aaagatctct atgatatacc ctccaattac taaacctatc
     1321 actgatcctg atgaaaaaag agcaatgatt attccttgac caatagcaag tttatcttta
     1381 gggaagacgt tttgaatgat gccaaaggct atcggaaata ttgctaaact caatccttga
     1441 ataattcttg aaattatcag gaaaaccata tttggtgaaa atccagcaga aagggttcca
     1501 ataatgtata acataataag taacaagaga acctttttcc ttccataaat aattgataat
     1561 tttgctgcga taggagtcat tacagcacca gatatcagaa aggagctcaa tatccatgaa
     1621 gaatatgaat atgttaaacc gaaatcctcg atgatatcgg ggattgcggg gataatcata
     1681 gtttcactag ctgtcgagat taaatcgatt gaacctagaa tgaataaagt tatccaagct
     1741 gaccttggaa tcatgttatt agaaccattt tttttaaaat ttgatatacc ataattgtca
     1801 gggttatcat cttccaatat tctatagtga taaatcaaat atttaaatga tggaactgtt
     1861 tttctcacat cattatggtt cccacattat ttatgaaagt cagataatat ttataataat
     1921 tgttagcaat tatcttgtaa acagaatttg aaaatttatt tccaaattta tacggttaat
     1981 ctattttaaa aacaatagat tgattcttat tattttctta tataaaatat tgggataaca
     2041 ggaatttaaa aaataaatta gagaagcctc attgaaataa cataactaga gaataaaaac
     2101 tgcagcactc aatactgtag tccatagacc atccttatga ccttctgcag attgggtata
     2161 attttgtgtc ttgtaaattc ttccagacaa tcgccactgt tcttcttttt catcccattt
     2221 tagggattga tcatttggaa gacccatggt tgtagctaac atttccattg ccatatcttc
     2281 tgcataatca ccagcttttt gacctgtttc tcctgtagaa tggtgttctg ataaatatcc
     2341 atattttccc tcttcttttg gatttgcaag gccaactgaa gctgcgataa gtctatttgg
     2401 ttcattagta gaagatcgag ccatgacagc aaacgtaatt tgtcctgaca aaagatactt
     2461 tcttccttcc agaatactaa gaaccttaca tttgggaggt ttaatactgg aaactgtgac
     2521 aagattaaga tcagaaattt ttgcatcgcg taacgcgagc tcgaaactgg tcaattgatc
     2581 tttatgaatt cccttacctt ttgtgaagaa cattgcctta ggaaggtaat taaatggatt
     2641 ggaaacttga ttagaaatgg agcaagattt tttagtcatt tttgtgtaat gttaaaatat
     2701 gttatattaa gattattaat tcttagtgat ttagagtaat acaacagatt taattatata
     2761 acaaaagtat agaacactta tacaatataa caatgaatct taaaagtctt attgaataaa
     2821 tggatccatc attgttgcat gattttaatt aaaaacttga aatttcgagt tcaacaatag
     2881 ggcttttcgc ttatttttca atttcctttt cctaccctat ccgtttt
//
LOCUS       DATIAS010000588         3301 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_106320, whole genome shotgun sequence.
ACCESSION   DATIAS010000588 DATIAS010000000
VERSION     DATIAS010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3301
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106320"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            249..698
                     /locus_tag="VLA74_11860"
     CDS             249..698
                     /locus_tag="VLA74_11860"
                     /inference="COORDINATES: protein motif:HMM:NF014044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
                     /protein_id="HSF51447.1"
                     /translation="MIEDYEKLGIFYLGKKYNTESKSTEDQLVLYESKDLLTHAVCVG
                     MTGSGKTGLCMVILEEAIIDGIPLIIVDPKGDISNLLLTFPQLNAENFLPWINEQDAI
                     KKGLSLEEYAKNQAETWKKGISDWNQQEERIGRLQFSKFYHIYTWQQ"
     gene            764..1600
                     /locus_tag="VLA74_11865"
     CDS             764..1600
                     /locus_tag="VLA74_11865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51448.1"
                     /translation="MFRERIDNTVTSLLTLDGIKANPQSREHILISTILNNVWSAGKD
                     FDLAELIKAILDPQMTKVGVLDIESFFPSKGRFGLVMSLNNLLTSPNFSSWMDGIDLD
                     IGNILYDKSGKPNVSIFSISHLNDNERMFFVTLLLNQILSWVRAQSGTMSLRSILYID
                     EIYGYLPPIANPPSKQPLMTLLKQARAFGLGVVLATQNPVDLDYKGLSNTGTWLIGRL
                     QTEQDRDRILDGLVGVSQNGNKIGNRKNIEQLISGLDNRIFLMNNTHEDGLEMLQTIL
                     NN"
     gene            1685..2365
                     /locus_tag="VLA74_11870"
     CDS             1685..2365
                     /locus_tag="VLA74_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51449.1"
                     /translation="MVSQYRWALSYLRGPLIKDQIKQLMAPMKKSKDFFVTKMKSEDL
                     GEPIVSKNDLNNDHTKINSKSKKEIKEQPIPSPEITQYFIPISFLGTKKPNEFFYKPV
                     ILGAVSLNFTDSKLAVDIIKDLTFITPIADGSIPVDWTNSQQIEIDIKKLQKNPDSEN
                     FMELPPEASKPKNYESWKKDFIDWLYRNQKLNLFKVKNIKEISKVEESERDFKIRIDT
                     LIRRIEII"
     gene            2362..2817
                     /locus_tag="VLA74_11875"
     CDS             2362..2817
                     /locus_tag="VLA74_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51450.1"
                     /translation="MTQKLRQKYASKMRSLQEKIQRTEGIVRLQQEQAQQQKIQTAFS
                     LGSTLIGAFMGRKIARYSARSASDGMRRVTRTAKEKNDVNKALQILQSYQRQFLDLET
                     EFKAEVAEIENKIRRNLNDLETITLKLDKKDISVKLLSLTWVPSSNNTT"
     gene            complement(3001..3123)
                     /locus_tag="VLA74_11880"
     CDS             complement(3001..3123)
                     /locus_tag="VLA74_11880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51451.1"
                     /translation="MSNVPLNKFEKKKRVIELHLQGKTIRDIAPVYEDERSFIK"
BASE COUNT         1283 a          452 c          541 g         1025 t
ORIGIN      
        1 attttatttt ttagttggac tagtattgta aacaatagtg aaacctctga gcccgatgtg
       61 atattagttc tctagttgga ttcactccaa accaaagaaa agatgaatca aaatagagac
      121 acaacaaata gtaaatcaaa atattgaaga atctactaca tattaattat ttttatatgc
      181 atttagatct ccagttacta aagattgtta tttaagacgg gtcctgctaa ggataaatta
      241 ataaggtaat gattgaagat tatgaaaaac taggtatttt ttatttgggt aagaaatata
      301 atacggaatc aaaaagcact gaagaccaac tagttttgta tgaatcaaag gatttgctta
      361 ctcatgctgt ttgtgttggt atgactggaa gtggaaaaac gggtttgtgt atggtcatac
      421 tcgaagaagc aattattgat ggcataccat taataatagt cgatccaaag ggagatattt
      481 ccaatctttt gcttaccttt ccacaattaa atgcagaaaa ttttttacca tggataaatg
      541 agcaggatgc tataaaaaaa ggactttcat tagaggaata tgcgaaaaat caagcagaaa
      601 catggaagaa aggaatatcg gattggaatc aacaggaaga acgaataggg agactgcaat
      661 tcagcaaatt ttatcatata tacacctggc agcaatagcg gaatcctagt ctctatctcg
      721 aaatctttca tctccttcaa aggtaatagt agaagattct gaattgttca gagaaagaat
      781 agataacaca gtaactagtt tgctaacgtt agatggtata aaagccaatc cgcagagtcg
      841 tgagcatatt cttatttcta caattttaaa taatgtatgg agtgctggaa aggattttga
      901 ccttgctgaa ttaataaagg caatactaga ccctcaaatg actaaagtag gggtattgga
      961 catagaatca ttttttccat caaaaggtag attcggccta gtgatgtcat taaataatct
     1021 attaacatca cctaattttt cttcatggat ggatggaata gaccttgata taggaaacat
     1081 attgtacgat aaaagtggaa aaccaaatgt ttctattttt tcaatatctc atttgaatga
     1141 caatgaacgt atgttttttg tcacacttct gttaaatcag attctatctt gggttagagc
     1201 tcaatcaggt acaatgagtc taagatctat tttatatatc gatgagatat atgggtatct
     1261 gccaccaata gctaacccac cgtctaaaca accattgatg actctattaa aacaggctag
     1321 ggcctttggc ctaggcgttg tattagcgac acaaaatcca gttgatttgg attacaaagg
     1381 attatcaaac acagggacct ggttaattgg aagattgcaa actgaacaag atagagatag
     1441 aatattagat ggactagttg gagtatctca aaatggtaat aaaataggta atagaaaaaa
     1501 tatagaacaa ttaatttcag gtttagataa taggatcttt ttaatgaata atactcatga
     1561 agatggttta gaaatgttgc aaactatact gaataactaa aattcgttta cagattcttc
     1621 ctgataagat aggttaatta tgcttgaaaa tcagcatttt tgatatatat agaatatgcg
     1681 aaatttggtt agtcagtata gatgggcact atcatattta cgaggaccac ttataaaaga
     1741 tcaaataaaa caattaatgg ctcctatgaa aaaatcaaaa gacttttttg taactaaaat
     1801 gaaatcagaa gatttaggcg aacctattgt ttctaaaaat gatcttaata atgaccatac
     1861 aaagattaac agtaaaagca aaaaagaaat aaaagaacaa cctataccat ctcctgaaat
     1921 aactcaatat tttattccta tatctttcct aggaacgaaa aaaccaaacg aattttttta
     1981 taaacctgtg atacttggag cagtttcctt aaattttact gattcaaaat tagctgtaga
     2041 tataataaaa gatttaactt ttattacgcc aatagcagac ggatcaattc ctgttgattg
     2101 gacgaattct cagcaaatag aaattgatat aaaaaagcta cagaaaaatc ctgacagtga
     2161 aaattttatg gaattaccac ccgaagcatc gaaacctaaa aattatgagt catggaagaa
     2221 agattttatt gattggctat atagaaatca aaaactaaat ttatttaaag taaagaatat
     2281 aaaagaaatt tcaaaggttg aagaatcaga acgtgatttt aaaattagaa ttgatacatt
     2341 aattcggagg atagagataa tatgactcaa aaattacgcc aaaagtatgc gtctaaaatg
     2401 cgttctcttc aagagaaaat tcaaagaact gaaggcattg taagattaca acaagaacag
     2461 gcacaacaac aaaaaatcca aactgctttt tccttaggaa gtacattaat aggagcattc
     2521 atgggtagaa agatcgctag atattctgca cgaagtgcgt ctgatggtat gagaagagta
     2581 acaagaacag caaaagaaaa aaatgatgta aataaagctc tacaaatctt gcaatcatat
     2641 caacgacagt ttttagacct agaaactgaa ttcaaagcag aagttgcaga aattgagaat
     2701 aaaataagaa ggaatttaaa tgatttagaa acaataactc ttaagcttga taaaaaagat
     2761 atttccgtca aattattatc tttaacgtgg gtaccatcat ccaacaatac cacttgatta
     2821 gaatagaatt taaaaattga tatgtatttt actctataaa aattacatat ttcaatgaaa
     2881 ttatacaaaa agctataagt atagtgaata attgatatct aattttatac tgtacaaggt
     2941 aaatctattt taaaagatgt atattgtctt aattttcttg tatatgaatt cagtgacaat
     3001 ttatttgata aaagatcgtt catcttcata tactggagct atatcacgga tagttttacc
     3061 ttgcaaatgt aattctatta ctcttttttt cttttcaaat ttgttcaaag gaacattaga
     3121 cattcctaca atatctttat aaaaaaaaga aagtacttaa atggtaacat tgctgtctga
     3181 tgttatcaat tagtttccat tgttatcatt tacttttcgc taagaataga aaaaatcata
     3241 ttaaatcatt caaaagcaga ttaaaatttc tttgtaggaa atgaaaatat agtaaacatt
     3301 t
//
LOCUS       DATIAS010000589         2140 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_787664, whole genome shotgun sequence.
ACCESSION   DATIAS010000589 DATIAS010000000
VERSION     DATIAS010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787664"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VLA74_11885"
     CDS             complement(<1..512)
                     /locus_tag="VLA74_11885"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSF51452.1"
                     /translation="MQIKDKKDIEFGLTIPQGWRGGDLPLEEENDPIKQYEFSKKIAL
                     AAEQASFSSIYAYDHFIPHFRDDVEKNIFECFILISSIASITQKIKIGQVVTCNSYRN
                     PSLLSKMIATLDIISNGRAEVGLGAGWYQEEYLSYGYDFPSNVTRISQLDESLQIMKK
                     MWKENTTSFIG"
     gene            967..>2140
                     /locus_tag="VLA74_11890"
     CDS             967..>2140
                     /locus_tag="VLA74_11890"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSF51453.1"
                     /translation="MKYSVGFVGWQNITVPSNKKEKEGKDIIENLCQTTFKSNDYLWY
                     YSHFFNFVQIDFLNIFKDKKILSDLPRFRQTLREWAELDPTDFKFAIMVPKQYIDIYN
                     DNHDKLERFLQELEPIQEKILVIVLKVPSTFTLAKDREWLNTLLKFFKQFKYSVAIEF
                     EHQSWYQDLTYNILKKYNTSLIWSDRHKYHVITSNFLYLQITENPEKWIQKVKEKEKD
                     IEKANDRSTNPYSDTDTIYFAGIVLDSNNISKINFIRKLFNLGQVQSVNNYNNPKNDI
                     KAWKGKAIFHVDINSFYSSCEEIRDPSLKGKPHAVIMTDEENNNITKGVVATCSYEAK
                     RLGVHSAMPLYKALNLCPNLILRAVDKRYYNMISEKVMEILERYADTLEQASIDEAY"
BASE COUNT          810 a          327 c          334 g          669 t
ORIGIN      
        1 cctataaaag aagtcgtatt ttccttccac atttttttca ttatctgtaa agactcatcc
       61 aattgagaga ttcgtgtaac gttagatgga aaatcatatc cgtacgacaa atactcttct
      121 tgataccatc cagcacccaa tccgacctca gcccgaccat tactgattat gtccaaggtc
      181 gcaatcattt ttgaaagaag actaggattg cgataagaat tacaggtgac aacctgtcct
      241 atcttaattt tctgtgttat tgatgcaatt gatgaaatca gtataaaaca ttcaaaaata
      301 tttttttcaa catcatctct aaaatgcggg ataaaatgat cataggcata aatggaactg
      361 aaactagcct gctctgcagc aagggctatc tttttcgaaa actcgtattg tttaattgga
      421 tcattttctt cttctaatgg tagatctcca cctctccaac cttgtggaat agttagtcca
      481 aattctatat cttttttatc ttttatttgc aatctgtatt ttaatgataa tctatctaga
      541 tataaataat ttgtaatact ttttaaatat taaaaagatt gacaataact gtgaacaaaa
      601 aaagaaatag gttaaacctc atttataagt acctaaaacg aaatacataa tatctgtatt
      661 tttaaacgat gaaaatgata acattcaaat aaactgattt tagcgcaact ttttaaataa
      721 ctttaacagc ttacgaatta aaaatcatct aatattatat tgacatcgtt tattcctcaa
      781 agcgttaaga aaacctttaa tttaatataa tgttttccac caagaattac catggtagat
      841 ataattaata tgacagatta ctacgaaatg acgtagacag aagcacatat agaaaagata
      901 caattatgaa taaaagatta aaaattgaat attccataaa gaattagagg aggggataat
      961 ataatcttga aatacagcgt aggtttcgtg ggatggcaaa acataacggt tccatctaat
     1021 aaaaaagaaa aagagggaaa ggatataatt gaaaatcttt gccagacaac ttttaaatca
     1081 aacgattatt tatggtatta ttctcacttt tttaactttg tacaaattga ttttctcaat
     1141 attttcaagg ataagaagat attgtcggat ttacctaggt ttagacaaac gcttagagaa
     1201 tgggcagaac ttgatcctac tgattttaaa ttcgctataa tggtcccaaa acagtatata
     1261 gatatttata acgataacca tgacaagtta gaaagatttc ttcaagaact tgaaccaatt
     1321 caagaaaaga ttcttgtaat agtgttaaaa gtgccatcaa cttttacttt agcaaaagat
     1381 agagaatggt tgaatactct cttgaaattt tttaaacagt ttaaatattc agttgcaata
     1441 gaatttgaac atcaatcttg gtatcaagac cttacctaca acattttaaa aaagtacaat
     1501 acttcgctga tatggtctga tcgacacaaa tatcatgtaa ttacatccaa ttttttgtat
     1561 ttacagataa ccgaaaatcc ggaaaagtgg atacaaaagg taaaagaaaa agagaaagac
     1621 attgaaaaag caaatgatag aagtacaaac ccttattctg atactgatac catttatttt
     1681 gcaggcatag ttctggatag taataatatc tcaaaaataa attttatccg gaaattgttt
     1741 aatttagggc aagttcaaag cgtcaataat tataataatc cgaaaaatga catcaaagca
     1801 tggaaaggta aagcgatttt ccatgttgac attaactcgt tttattcatc gtgtgaagag
     1861 ataagagacc catcattaaa aggaaaacct catgctgtca taatgaccga tgaagaaaat
     1921 aataacatta caaagggagt ggtggcaacc tgttcatacg aggctaagag attgggagta
     1981 cattctgcaa tgcccttata caaagcgtta aacctatgtc ctaatttgat tctgcgagct
     2041 gtggacaaaa gatactataa tatgatctca gaaaaagtaa tggaaatact ggaaaggtat
     2101 gcagatactt tggaacaggc tagcatagat gaggcatatt
//
LOCUS       DATIAS010000590         4291 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1603466, whole genome shotgun sequence.
ACCESSION   DATIAS010000590 DATIAS010000000
VERSION     DATIAS010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4291
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1603466"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..326
                     /locus_tag="VLA74_11895"
     CDS             183..326
                     /locus_tag="VLA74_11895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51454.1"
                     /translation="MATASYDGTCKNCGSDLSVWIEVRKNTDGIPKPEVWCIDCIRGS
                     NSK"
     gene            1252..1467
                     /locus_tag="VLA74_11900"
     CDS             1252..1467
                     /locus_tag="VLA74_11900"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSF51455.1"
                     /translation="MELMYFTGNAEIENPTILLLHGYPASSHMYRNLIKELEDEYHII
                     APDYPGFGNSDQLPINKFEIHSITFQM"
     gene            1519..1842
                     /locus_tag="VLA74_11905"
     CDS             1519..1842
                     /locus_tag="VLA74_11905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51456.1"
                     /translation="MIMALQWVSDWQSNHPERIQAIITQNGNAYEEGLLSTWNPIRSY
                     WKNPTKENKEKLINLLFTHNFTKYQYVNGTRNHDKISPDSWNLDQSVLKRPGNIDLQL
                     GLLYD"
     gene            1852..2070
                     /locus_tag="VLA74_11910"
     CDS             1852..2070
                     /locus_tag="VLA74_11910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51457.1"
                     /translation="MKQYPIWHEYFRKYQHPTLVAWGKNDIFFESNGALAFQKDLNDV
                     EVHLLNTGHFPLEEDLDISASLIKRFLG"
     gene            complement(2373..2588)
                     /locus_tag="VLA74_11915"
     CDS             complement(2373..2588)
                     /locus_tag="VLA74_11915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51458.1"
                     /translation="MVIELLLNWECFKYLGCVVGEDLTNTAATYIGIIIGTVLGAGIS
                     MLIYKRQQKTTEEQDKILKHIEELGIK"
     gene            2875..3015
                     /locus_tag="VLA74_11920"
     CDS             2875..3015
                     /locus_tag="VLA74_11920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51459.1"
                     /translation="MNNLALFIHKFEENRLLTFDVIDDSYEHFNNRLKIQKFVEEVII
                     IV"
     gene            3012..3401
                     /locus_tag="VLA74_11925"
     CDS             3012..3401
                     /locus_tag="VLA74_11925"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HSF51460.1"
                     /translation="MNYNKLNSEEEKVIVDKATEPPFIGEYDNFYKDGTYICRRCNTP
                     LFSSKSKFNSGCGWPSFDEYFPNAIRHVPDPDGIRIEIECANCNAHLGHEFLGERFTD
                     KNRRECVNSLSIRFIPKDKELPKKTNG"
     gene            3394..3951
                     /gene="msrA"
                     /locus_tag="VLA74_11930"
     CDS             3394..3951
                     /gene="msrA"
                     /locus_tag="VLA74_11930"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HSF51461.1"
                     /translation="MDNNNEMEIATLANGCFWCTEAIFKKLKGVKSILPGYAGGTVKN
                     PSYNQVCTGITGHAESIQIKFDPKVISFEKILDIFWHTHDPTTLNRQGNDVGTQYRSA
                     IFYHDEKQKEIAEKSKKDIEQEHVYKDPIVTEISPFKNFYVAEDYHKDYYENHKDNSY
                     CNLIIDPKLDKLLKKYRNEVKEEYK"
BASE COUNT         1610 a          597 c          589 g         1495 t
ORIGIN      
        1 taatgaaata atattttctc tacctttgtg agtgtggttc tactaacacc tataaagcca
       61 gcaatattat ctaatgatat atcttgtatt aaattgaccg aggatttacc tgctaattgt
      121 ctttcctgtg agttctttta aataacttta taaattatta ttaccaatat taatgaaaga
      181 aaatggcaac tgcatcttat gatggaacat gtaaaaattg tggttcagat ctatctgttt
      241 ggatagaagt aaggaaaaat actgatggaa taccaaagcc tgaagtttgg tgtatagatt
      301 gtatacgtgg tagcaattcc aaataataac aataataatt agcagaatta aattctactc
      361 attaatttta ttttatattt ttaattttct aaaagaattt caatatacgt gctacctgac
      421 aattgtccca tttttttgtt tatgcatatt tattcgaatc tcaacaacta atcgatctat
      481 catttatatc catatcaata aatcctttaa tgaactatac atcatatctt acacttctct
      541 taatacgaag aatgtgatat ttccccctac aatctccaat gttctagata tagtcatcta
      601 tcttttgcta tacctcatta tgatctctcc atcaaggtca taaagacagt ataataacaa
      661 ataaatacat agttttacta taacaataac tcatacttta taattatatg gtacaattat
      721 tattatttca ttatatttat gacacttata gtaacgctaa catttttcat tgtagttacg
      781 taacgttaat ttttgtagaa ctaaaattgt tgaaggttca ttattatatt tgtgctctct
      841 ggtagaaata gtatgacaaa cgatcaaaca tcttacctat aataaaaata tcaatccatt
      901 actacaacaa tatcgttgta gccattatag aagtgaaatt gaaattaatt ggtattgcca
      961 tttttaatta tcaatttcca atatctgttg aaaagcggat cgttgaaaaa aatttattcg
     1021 gcgatgatgg tgatgctgtt tctactatta ataaataatt tcaactatat atactgatta
     1081 tttttaattc gaaacagatt ataatttgga aataaagacc ctgctgttat ttaacagctt
     1141 tcaaactatt acgttatcct ccttcgattg gtaactaatt aatggtaaaa ccttattaag
     1201 ataatttatg atatgataat atatccatat tatataaaac tgctaatatt aatggaatta
     1261 atgtatttta cagggaatgc ggaaatagaa aatccaacta tcttattact tcatggttat
     1321 cctgcttcat cccacatgta ccggaactta atcaaagaac ttgaagacga atatcatatt
     1381 attgctcctg actatccggg atttggaaac agtgaccaac ttccaattaa taaatttgaa
     1441 atacattcga taacatttca aatgtgataa atggtcttgt ggaagaatta aaatcagaca
     1501 aatatagtat ttatgttcat gattatggcg ctccagtggg tttcagattg gcagtcaaat
     1561 caccctgaac gaattcaagc gataattact cagaatggaa atgcctatga agagggatta
     1621 ctatctacat ggaatccaat acgcagttat tggaaaaatc ccactaaaga aaataaggaa
     1681 aaattaataa atctactttt tacccataac tttacaaaat atcaatatgt aaacgggact
     1741 cgcaatcatg acaaaataag tccagattca tggaatctgg atcagtctgt attgaagagg
     1801 ccaggcaata tagacctaca acttgggtta ttgtatgact agcaaaataa tttgaagcaa
     1861 tatcctatat ggcatgagta ctttcgaaaa tatcaacatc ctacattagt tgcatgggga
     1921 aaaaatgata ttttctttga atcaaatggc gcattagcat tccagaaaga tctgaatgat
     1981 gtggaagttc atctactaaa tacaggacac tttccactag aagaagactt ggatatcagt
     2041 gctagtctaa taaaacgttt tttaggttaa cgaattaaat aattctaata aatatattga
     2101 ctaatcaatt tcaatatgaa ttatagattc tgtaaaactc aaccaagtaa atgataacat
     2161 aagaatatta gtatggcact ttcaaatgtt gtatattgta gataaattta aagattttat
     2221 atataattaa tttcaaaatt aaattatttg ctttctaata gtgaatctat tttcttattc
     2281 aatgttgaaa aattgtttaa cattttatta tgattcttta acattctttc atggttctct
     2341 tcaaaggttt gtatatgatt tataatgtgt ccttatttta ttcccaattc ttctatatgt
     2401 tttagtattt tatcctgttc ttctgtagtt ttttgttgtc tcttatatat taacatacta
     2461 atacccgcac ctaatacagt tcctataata atacctatgt acgtagcagc agtattggta
     2521 agatcttctc ctacaacaca acctagatac ttgaaacatt cccaatttag taataattct
     2581 attaccataa aaatgacatt tctatatact ttttaataat tacttatctt ctaataccat
     2641 tttaagtaat taatttatat tgttcaaata tcaaagacat caatagcgat taaaatattt
     2701 atcttcattt aactagatat taccaatatt attgcaggta taaacaaaag taaagttaga
     2761 tataaacaaa tagaaccaga cagaataaag ttatagaata aaaaattctt tgtaatttac
     2821 tagaaacaaa aatcctatat cggaggaagt atattgtatt atagatgaat tgatatgaat
     2881 aatttagcac tatttataca taaatttgaa gaaaatagat tattgacatt tgatgttata
     2941 gatgatagtt atgagcactt caataatcga ttaaagattc aaaaatttgt agaggaagtt
     3001 ataataatag tatgaattac aataaactaa attcagaaga ggaaaaagtc attgtagata
     3061 aagcaacgga acctcctttc attggtgaat atgacaattt ttacaaagat ggaacatata
     3121 tctgtagaag gtgtaatact cctctcttct catcaaaaag caagtttaat tctggatgtg
     3181 gatggccaag ctttgatgag tattttccaa atgccataag acatgtgcca gatcctgatg
     3241 gaataagaat agaaatagaa tgtgcaaatt gtaatgcaca tttaggacat gaatttcttg
     3301 gagagagatt tacagataaa aatagacgag aatgtgtcaa ttcattatct atacgtttta
     3361 tcccaaagga caaggagttg ccaaagaaaa caaatggata ataataatga aatggaaata
     3421 gcaactcttg ctaacggatg tttttggtgt acagaagcaa tcttcaaaaa acttaaaggt
     3481 gtcaaatcta ttttacctgg ctacgcggga ggaacggtaa aaaatccttc ttataatcag
     3541 gtatgtactg gtattactgg tcatgcagaa tcaattcaga tcaaatttga tccaaaagtt
     3601 atatcttttg aaaaaatcct agatattttt tggcatacac atgatcctac aactctcaat
     3661 agacaaggta acgatgttgg cactcagtac cgttctgcaa tcttttatca tgatgaaaag
     3721 cagaaagaga tcgcagaaaa atcaaaaaaa gatattgaac aagaacatgt ttacaaagat
     3781 ccaattgtta cagaaatttc tccatttaag aatttttatg ttgcagaaga ttatcacaaa
     3841 gattactatg aaaatcataa agataattca tattgtaatt taattattga tcccaaatta
     3901 gataaattgc ttaaaaaata tagaaatgaa gtaaaagaag aatacaaata gatattttat
     3961 gaagaaatag agttacataa attcattatt ctctgtaggt agataataat ctataggcat
     4021 gaatcaatat atctaaaatt tatttatgat cagagggtat ttaatgaaaa cttggtaata
     4081 aaatacctaa taacacaaca atgcaataac acacaatatt atataaataa ttaaatagaa
     4141 aaaagattat tatattttta attttttatt tattgtctat taaatgatct ttctattttt
     4201 cgtatataat tataattatt ttgcacgata tcgttgtaat atctttgtgt aagttctatt
     4261 gatttattga aattctcaat actaccaaca g
//
LOCUS       DATIAS010000591         2625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1332388, whole genome shotgun sequence.
ACCESSION   DATIAS010000591 DATIAS010000000
VERSION     DATIAS010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332388"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(548..1264)
                     /locus_tag="VLA74_11935"
     CDS             complement(548..1264)
                     /locus_tag="VLA74_11935"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSF51462.1"
                     /translation="MLLFTLQSIILVQSISGQTDEVEEEGSPKIEKPKVDVTIDGTAA
                     DDRIKGGNGDDRINGEEGYDVLFGGAGDDRIDGGEGNDEIHGEDGNDDLRGEEGDDRI
                     YGERGIDELDGGEGNDILRGAAGNDMIEGAEGNDTLYGGPGNNTLSGGDGDDIIYDER
                     GHSELEGGKGNDKLYGGRGNDELDGGPDNDMLTGSAGADVFKCDQFDKILDFDSTEGD
                     IKIGPCLIGNESLSQLSLLF"
     gene            complement(1983..>2625)
                     /locus_tag="VLA74_11940"
     CDS             complement(1983..>2625)
                     /locus_tag="VLA74_11940"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HSF51463.1"
                     /translation="SLSGVAAGAISVTAGTIIGFSSRNTISNAIAGILLLSSRPFKLG
                     DRIRTTEDETLVGDVVEITLLYTKIKTVRNELVTIPNQTLLQRQIVNYSGLDVLAIAV
                     EISMTYNNNRKLIEQLMIESAKMTEGIITSSSSSSTISITTEPYVILKTFDDYGATYE
                     LRAYTKRPNEYQKLQSEIRKNIYDIFQKHGLDLTVPQAQIDMVKNDLSSKVVK"
BASE COUNT          846 a          453 c          295 g         1031 t
ORIGIN      
        1 ataagaacta gaaaataacc tttacttttg ttatcgattc ataatttttt cttatattat
       61 gaaatgatct tttaatcact gatccacttt tgaaaatatc tttaactatc aatccgttag
      121 agttatttta taaataaatc aaacaatcaa ctaaaacaga tatctaaaag actgcagatt
      181 aagaccaaaa tcaatatgat tgcagcactg cagcactgca gcgctactta taacatataa
      241 tatattttta ttgttgttgt catagcttaa aataattcat aaaactaaat tggaatccta
      301 accttcgtcg atcaaatatt ggttctacat ttatatactt aaatatttag aataagcagg
      361 tttatcttgt aattctcttt cttctcttat aacaacttga aatcaagacc agaataatat
      421 cttatagaaa tttatgctat gtacatattt gccaatttta aatccataat attattttag
      481 agatgtacat aattgtctaa attatcctaa ataatacaat aacatatata ctttgcaaag
      541 tatatattta gaataatagg gataattgag aaagtgattc attcccaatc aaacaggggc
      601 cgatttttat atcaccttct gttgagtcaa aatccaatat tttatcaaat tggtcacatt
      661 tgaatacatc tgctcctgca cttcctgtta gcatatcatt atctggacct ccatccaatt
      721 catcatttcc tcttccacca tataatttat cattgccttt gcctccttct agttcactat
      781 gtcctctttc atcatatata atatcatctc catctcctcc acttaatgta ttatttcctg
      841 gtccaccata taaggtatca ttaccttcag ctccttctat catatcattt cccgctgctc
      901 ctctcaaaat atcatttcct tctcctccgt caagctcatc aattcctctt tcaccatata
      961 tcctgtcatc tccttcttca cctctcaaat catcgttccc atcttctcca tgaatttcat
     1021 cattaccttc gcctccatct attctatcgt ctccagctcc tccaaaaagt acatcgtaac
     1081 cttcttctcc atttatcctg tcatccccat ttcctccctt aattctatca tcggcagcag
     1141 tgccatctat tgtgacatcc acttttggtt tttctatttt aggactacct tcttcttcta
     1201 cttcatcagt ctgcccacta atagattgaa ctaatatgat ggattgtaat gtaaataata
     1261 acaataacat gaaaaaacca atatagcaat atcttaatga gaattgatgt acaaaagaac
     1321 aactgatatt tttatatttt tttattttca tttttattct tctgttaatt acaggtatta
     1381 tataatttaa taagtgaaac ttttactatt tagtggaaga attgtcttaa tgatagatat
     1441 gaatagactc tatagcgcta aattaattac tctttattat tgctaaaatc aaaagaatta
     1501 gtataactga atttgaattg gattcatctt tgacaataga attaattaca aattcataga
     1561 tattcagaaa ttgattcttc tatgcattaa ggttcttcta ctatattgta tttagctttt
     1621 attattagaa acttaattta aattaattta atgtagattt attttgatag agtatgttga
     1681 attgcttttg ccaatagaaa tataacaaaa cctagtgaaa gctatggaaa aatataagaa
     1741 attattcggg caataatttt cattttatac aataatatgt tgattaagat attatgattt
     1801 tataagattt ttagagaaat aaaatctatc aaccttaatt gaattatgta gatgtgacga
     1861 gatttatcca acgtttttac actattttat atctgatggg aagcttacag aaccgattat
     1921 attattattg gtcaagtgat atttgataat taaaagatta ttgatgagat ttttctattt
     1981 ttctatttta ctactttact acttaaatcg tttttgacca tatctatctg ggcttgagga
     2041 acagttaaat ctaatccatg tttttggaat atgtcatata tattttttct aatttcagat
     2101 tgtaattttt gatattcatt tggccttttt gtatatgctc ttaattcgta tgtggctcca
     2161 taatcatcaa aagttttaag aattacataa ggctctgttg ttattgaaat agtgctagaa
     2221 gaagaagatg atgttattat tccttcggtc atctttgcag attctatcat taattgctct
     2281 atcaattttc tattattatt ataagtcata gaaatctcta ctgctattgc aagaacatct
     2341 aatccactat aatttactat ttgtctttgt aataatgttt gatttggtat ggttactaat
     2401 tcgtttctaa cggtctttat tttagtatat aataaagtta tttcaactac atctccaacc
     2461 aaagtttcat cttctgttgt tctaattcta tctcctaatt taaaaggtct agatgataat
     2521 aacaatattc ctgctattgc attgcttatt gtatttcttg aagaaaaacc aataatagta
     2581 ccagcagtta cacttattgc accagcagca actccactta gagat
//
LOCUS       DATIAS010000592         8280 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_652205, whole genome shotgun sequence.
ACCESSION   DATIAS010000592 DATIAS010000000
VERSION     DATIAS010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8280
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652205"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..645)
                     /locus_tag="VLA74_11945"
     CDS             complement(286..645)
                     /locus_tag="VLA74_11945"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSF51464.1"
                     /translation="MKEIDIYIRSDDLSKVTDILQKYKVGMTFFDIFGTGRTPRAAQK
                     IVDVYMTGKTNIPKFVKRTNVKTIVPDASAKQIVDDLLNSFGSAVEPYGLMFIKDVSD
                     AYEIGSKLSGDAVLTLK"
     gene            complement(861..1370)
                     /locus_tag="VLA74_11950"
     CDS             complement(861..1370)
                     /locus_tag="VLA74_11950"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF51465.1"
                     /translation="MSFKIKKRFFFKKNLNDNKKELSKNKLAEDSIKEGEKYANKNNL
                     EESLKCFDTAINLDPKNDLALGDKALILDILGKHDEALTFFSRALEINPANSITWHNK
                     GLTFIRLNRLQEAIECFDKAIEFRKDYAKAWYNKGRCLEMMSEIKKSQECLNTARKLD
                     PFLFTKVKK"
     gene            complement(1355..1627)
                     /locus_tag="VLA74_11955"
     CDS             complement(1355..1627)
                     /locus_tag="VLA74_11955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51466.1"
                     /translation="MDLRLESNRSNVREFEDLLSRMVFLSYHIANYKNISESIGFDNC
                     EISIDEIHDFIQDLKYEINEEIPSINKRDINYCLCILKSLGICHLK"
     gene            1806..2564
                     /locus_tag="VLA74_11960"
     CDS             1806..2564
                     /locus_tag="VLA74_11960"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSF51467.1"
                     /translation="MKIKNIPVNLIDIAEENVRKNFPFGQGANDNLIKTHLSKFDLLQ
                     PVVVRFDKESKRYKLLIGRRRFLALSDKGEKEISAVITELEGAEAEAASLFENLIRKD
                     LSSIEKAMMVKKLVDSTKSGISGVSKKYGLPKSTVSEWLSILTLSKEIRERIEKGEIT
                     SYEAIAIARKPKSFQDTLTKVTTREKLDEEMIRLGVKRGAPKGLLTVRLVFNPLKRKE
                     KDIWDILNKEAKENGLEITDYVKIILANHIKHNN"
     gene            complement(2656..3111)
                     /locus_tag="VLA74_11965"
     CDS             complement(2656..3111)
                     /locus_tag="VLA74_11965"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF51468.1"
                     /translation="MFKKILLAFDGSNASTNAAKYAIHLSSLENSQLIFLNVIENIKQ
                     GGVIGLRAKYGDMKLVEGYTNTRRKNAEEWIKPIEKSAKDKGINTKVEILEDDGNSLI
                     GFIINYAEKNNVDLIVVGTKGQSKFRRLLMGSVASGIIHHAKCPVLLIK"
     gene            complement(3131..3412)
                     /locus_tag="VLA74_11970"
     CDS             complement(3131..3412)
                     /locus_tag="VLA74_11970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51469.1"
                     /translation="MVLVTENEIDGTSRKAIEALYGQNIQDFNVRVVFPYSTDPILDR
                     SNSTDSRMDSWDVQVTFLMNGIQYTVDLIIHKEDGQISHAKLIDKMKPL"
     gene            3580..5280
                     /gene="thsA"
                     /locus_tag="VLA74_11975"
     CDS             3580..5280
                     /gene="thsA"
                     /locus_tag="VLA74_11975"
                     /inference="COORDINATES: protein motif:HMM:NF041082.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit alpha"
                     /protein_id="HSF51470.1"
                     /translation="MYQLFNEGVKRTNGKDARRLNLFAGELISNLIKDSFGPGGKEKM
                     FIDILGEITLTKNGATFLRKIDVQHPAAKILIEASNAVDNEVGDGTTSVVLLAGGLLQ
                     RAAELLGMGISPNIISNGYRKGLEISLQVLDKIAEEPNNINIIDLMKNLAKTCLGTKI
                     TSYSITDQSNSLGDLIVEAIYTLTNCFDKDFDIDDIKIEEKPGNMSDIQLIKGIIIDK
                     TFDNHLIPKKIENAKILLIDDDLEPKRTKMNAEIIINSYTQMQDFIIAESEIVRKKID
                     NIIKSGTNVVISRKGINLSASTYLAKENIISIKRVKENDLLWLEKATGAKIVIDIGKN
                     DLKEFLGFAGKIYEKMVGDDRITFVDECKHLKSVTILLRGSSKMIRDECHRTCLDAIY
                     VIKDFIKKNRIVGGGGACEAIIASKLRDTRYTINNKEQIVLQKFAEVLEEIPLIIAKN
                     LGMNVINVQTKLRSKLKDVDKNRKIEWYGINANKRTVDKIFPEIIEPSLVKEQVLKTA
                     VEVAILLISVDDVLMAKQSLNTHTHNDGTVHSHEGGEKNHDHYFDKLGKKQRPTHHFY
                     "
     gene            complement(5498..5896)
                     /locus_tag="VLA74_11980"
     CDS             complement(5498..5896)
                     /locus_tag="VLA74_11980"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF012756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HSF51471.1"
                     /translation="MIQIKIQFKGESDIPPSYLCFEYRDKIDEITFYNVVNMIKGKLS
                     RNLKINLYETLLIYSSSIIDQLRSKKPIIDIQKNAKKLLLSDNVMIGVPNMLGRTIFQ
                     VKLDNDDHFTEVLFEKPLDIDQYILATTDH"
     gene            complement(5902..7017)
                     /locus_tag="VLA74_11985"
     CDS             complement(5902..7017)
                     /locus_tag="VLA74_11985"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase family protein"
                     /protein_id="HSF51472.1"
                     /translation="MGMEFYGDSYKGNDEPIFVGIPTFLKLPWMKNFEELKKVKPDMA
                     IIGEPFDFGTTIRPGTRYGPRAIRAASTVPSPPYEHFNIETGVDPFGVFKTVDYGDVV
                     VSPGDVIESHRRMTAKVKEVLDIDATPIILGGDHSITFANVRALAKKYKNIGMIHIDC
                     HADCAPQGLCGFKYDHGAHIRRIMELGCLKGKNYTLIGPRGYWPGPDLYKWMADQDFQ
                     WFTMLDVEELGIDQIAKEAADRANDNVDAVYLSWDIDTFDPAYAPGTGEPEPNGLTSR
                     EGMRLMRLLSTSFDPDRFGFDLVEVSPTYDVSDVNSYNGGITSGLANRLIVELMAGLS
                     LTKKGEKDGNPVRPKFYRGKGHTYDFGNGPKAQVPER"
     gene            7223..>8280
                     /locus_tag="VLA74_11990"
     CDS             7223..>8280
                     /locus_tag="VLA74_11990"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51473.1"
                     /translation="MAIIDAYGIAVLAFMALVLSVGILTSLLVKKSSKRYMVAGKSLP
                     LFFIGTMLTAQAVDGNSSLGNVALVYQFGFWAGAAIPIGLATCLILTATIYGPRLNKM
                     TMLTLPDFYFRRYGVGTEGISSVIMMLSFIILVAGNFAAGGFILSTVLHIPLFWAMLI
                     VSSAVLVYTFAGGLFSSAYTDIFQVYLTVGAFWATFLFFVLGFSGIDFSTILGAAPEG
                     FLDLSGLTSMENGALVNWGGILALGIGDVVALDFMERVFSARDPKTARRGALMAAGLT
                     ISVIVPVSMMGIVALYYLPNIADPYTVYPTLALEHLPFPIGAALLMGVLGASMSTANG
                     GLLAISSVIARNLIQRDI"
BASE COUNT         2810 a         1271 c         1319 g         2880 t
ORIGIN      
        1 agttttgtaa agacattagt aagttatttg tgtaaaccaa cactaattac tttgttttat
       61 tatctatgaa caacttcatt cagaagtaac caatccaaag taatcacttt tactttacat
      121 tatatactac caaggtaatt acaatgctgt taatttagaa gctagcttga atacaatatg
      181 aattgttacc caataaagat tttcatatag tcagagccac aaaatctgtc ctactataaa
      241 taaaaatatg atagtatata gaattatttt tacagaaaag attaattatt tcaaagtcag
      301 tacagcatcg ccactgagct tagaccctat ttcataagca tcagagacat cttttataaa
      361 cattagccca tatggttcta ctgcagaacc aaaactattc aagagatcat caacaatctg
      421 ttttgcagac gcatcaggta caatagtttt aacattggtt ctctttacaa attttggaat
      481 attcgttttt ccagtcatat atacgtctac aattttttga gcagctcggg gtgttcttcc
      541 tgtaccaaag atatcaaaaa atgtcatacc taccttatat ttctgtaaaa tatctgtaac
      601 cttagaaaga tcatcagaac gaatatagat atctatttct ttcatgttat aaaatattta
      661 gtaaatcaaa taaggttttc tatttatata attataaata atgaatcaga taaatgatgc
      721 tattttcttt acaggtttct tatacaaagg tctatataat ttctaatcta cattgaaatt
      781 ttatattttg gttaaattat acagatgttc aattcttgtt catcattgaa taacccaaat
      841 ataatatata aaattttatt ttattttttt acttttgtga atagaaaagg atccagtttc
      901 cttgcggtat ttagacattc ttgagatttt tttatttcac tcatcatttc caaacatctt
      961 cctttattgt accaagcttt tgcataatct tttctaaatt ctattgcttt gtcaaagcac
     1021 tctattgcct cttgcaatct attaaggcga ataaatgtta gacccttatt atgccatgtt
     1081 attgaattcg ctggatttat ttccagagcc ctagaaaaga aggttaatgc ttcatcatgt
     1141 tttcctaata tgtccagaat taatgcttta tctcctaaag caagatcatt ttttggatca
     1201 agattaattg cagtatcaaa acatttcagg gattcttcca aattattttt atttgcgtat
     1261 ttttcacctt cttttataga gtcttcagct agtttattct tactgagttc ttttttatta
     1321 tcgttgaggt tttttttaaa aaaaaacctt ttttttattt taaatgacat atacccaaag
     1381 attttagtat gcacaaacaa taatttatat ctctcttatt aatagaagga atttcttcat
     1441 ttatttcata ttttaaatcc tgtatgaaat catgtatctc atcaatagat atttcacagt
     1501 tatcaaagcc tatagattca cttatatttt tatagttagc aatatgatag gaaagaaaca
     1561 ccattctaga taataaatct tcaaattcac gtacattaga tctgtttgat tctaatctga
     1621 ggtccatata tttcagaaaa cttttacaaa agatataaag attcttgaac aattggtaaa
     1681 ctacgaattc tctataaaaa ttcatccgta taatacgatt attagatatt gctattgtta
     1741 ctgagataat ctgataggat tattgcaaaa ttaatatatt attgatatat atttactatt
     1801 tataaatgaa aattaaaaat attccagtta atcttataga catagcagag gaaaatgtga
     1861 gaaaaaattt tccctttgga caaggtgcaa atgataatct aattaagaca cacttgtcaa
     1921 aatttgattt acttcaaccg gttgtagttc gatttgataa agaaagtaag agatataaat
     1981 tattgattgg tagaagaaga tttttagcat tatctgataa aggtgaaaaa gaaatttcag
     2041 cagtaataac agagttagaa ggtgctgaag cagaagcagc ttcattattt gaaaatctta
     2101 ttcgcaaaga tctttcttct attgaaaaag ctatgatggt aaagaaactt gttgattcca
     2161 caaaatcagg aatttcaggt gtatcaaaaa aatatggact tccaaagagt acagttagtg
     2221 aatggttaag tattttaact ctctctaagg aaataaggga aagaattgag aaaggtgaaa
     2281 ttacttctta tgaagcaata gcgatcgcaa gaaaacctaa aagcttccaa gatacattaa
     2341 ccaaagtaac aactcgagag aaattagatg aagaaatgat aagattgggt gtaaaaagag
     2401 gagcaccaaa aggattattg acggtaagat tagtctttaa tcctcttaaa agaaaagaga
     2461 aggatatttg ggatattctt aataaggaag ctaaagagaa tggtttggaa attacagatt
     2521 atgtaaaaat aatactggct aatcatatta agcataataa ttaatttcta aagcttatat
     2581 attgtccgaa gtagaattta attgaattgt aaagatacga ttagattcat acaaataatt
     2641 agaacaaact tttaattact ttatcaataa tactggacat tttgcatgat gaataattcc
     2701 agacgcaaca ctacccatca ataatctcct gaatttagat tgtcccttag tgcctaccac
     2761 aataaggtca acgttatttt tttcagcata atttatgata aaccctatta atgaattacc
     2821 atcgtcctct aaaatttcca ccttggtatt tattccctta tcctttgcag atttttctat
     2881 tggttttatc cattcttctg catttttcct gcgagtattt gtataacctt ctaccaattt
     2941 catgtctcca tatttcgctc ttagacctat aacacctcct tgtttgatat tttcaataac
     3001 attaaggaaa attaattggg aattttctag tgatgaaagg tgtattgcat atttagcagc
     3061 attagttgaa gcattagacc cgtcaaatgc taagagaatc tttttaaaca ttttaaaacc
     3121 ttcaaaaaaa ttaaagtggt ttcattttat caattagttt tgcgtgactt atttgtccat
     3181 cctctttatg aattattaaa tccacagtat actggattcc attcattaag aaggttactt
     3241 gaacatccca tgaatccatg cgtgagtccg tagaattact tctgtctagt attggatcag
     3301 tcgaatatgg aaaaacaact cttacattaa aatcctggat attttgtccg tataatgctt
     3361 caatagcttt tctagatgta ccatctattt cattttccgt tactaatacc attattaatt
     3421 ataatgcaat tagtaaatat aaaaaagtat tgttaagaaa taaatcttat aaacttaaat
     3481 tcgtaaatta ccctagtaat ttctattgca aaatgaatat tttaataatt tacgaaataa
     3541 taatgattac atattacatg cttcagtaat agaataatta tgtaccaact attcaatgag
     3601 ggtgtaaaaa gaacaaatgg taaagatgca agacgactaa atttgtttgc tggtgaattg
     3661 atttcaaacc ttataaaaga ttcatttgga ccaggaggta aagagaaaat gttcatagat
     3721 atacttggag aaataacatt aacaaagaat ggagcaacgt ttttacgaaa aattgatgtt
     3781 caacatcccg ctgcgaagat attaatagaa gcatcaaatg cagtagataa cgaggtaggg
     3841 gatggtacta cttcagtagt tcttctggct ggaggtcttt tgcagagagc ggctgaattg
     3901 ctaggaatgg gtatttcacc aaatataatt tctaatggat atcgaaaagg tctagaaatt
     3961 tcgttacaag tattagataa aatcgctgaa gaaccaaata atataaatat tattgatttg
     4021 atgaaaaatt tagctaagac ttgtttaggt acaaaaatta cctcttattc gataactgat
     4081 caaagtaaca gcttgggaga tctcatagtt gaagctatct atactcttac gaattgtttt
     4141 gacaaggatt ttgatattga tgatataaaa atagaagaaa aaccaggaaa tatgtctgat
     4201 atacagttaa ttaaaggaat tataatagac aaaacatttg ataaccattt gatacccaaa
     4261 aaaatcgaaa atgcaaaaat tcttctcata gatgatgatc ttgaaccgaa aagaaccaag
     4321 atgaatgctg aaattatcat caattcgtac acccaaatgc aagattttat aatagctgaa
     4381 tcagaaattg taaggaaaaa aattgataat atcataaagt ctggaaccaa tgttgttata
     4441 tctcgtaaag ggattaacct tagcgcaagc acttatttag caaaagagaa tataatttct
     4501 atcaaaagag tcaaggaaaa cgatctttta tggcttgaga aggcaacagg ggcaaaaatt
     4561 gttattgata taggcaagaa tgatctaaag gagtttttag gatttgctgg aaagatatac
     4621 gaaaagatgg taggagatga taggataaca tttgttgatg aatgtaaaca tttaaagtct
     4681 gtaactattt tattaagagg tagctcaaaa atgattcgtg acgaatgtca tagaacatgt
     4741 ttagatgcaa tatatgttat aaaagatttc atcaaaaaga atagaattgt cggtgggggt
     4801 ggtgcctgtg aagccattat tgcatctaaa ttaagagata cgagatatac cataaataac
     4861 aaagaacaga tagttcttca aaaatttgct gaggttttgg aggaaattcc attaattatt
     4921 gctaaaaatt tgggaatgaa tgtgataaat gttcagacta aattaagatc gaaacttaaa
     4981 gatgtcgata aaaatagaaa gattgagtgg tatgggatta atgccaataa acgaacagta
     5041 gataaaatat ttcctgaaat catcgaacct agtttggtga aggaacaagt tttaaagaca
     5101 gccgtcgagg ttgcgatact tttgatatca gttgatgatg ttctaatggc aaaacaatct
     5161 ctgaataccc atactcataa cgatggtaca gtacactctc acgaaggagg agagaaaaat
     5221 catgatcatt acttcgataa attagggaaa aaacaacgtc ctacacatca tttttactag
     5281 tttttaacta cataaaacaa gaaaatgata ttgtctaata aaaacaaatt atgtgactcg
     5341 aaagctttat tatagatctt attatagaaa atggttgatt gattagatta gatattttac
     5401 caagatatga tttcaataat attcaacaaa aaacagatat tatagccacc cttatttgag
     5461 aagagaccaa tttggagatt ttgggtagaa cttaaattta atgatcagtg gtagctagaa
     5521 tatattggtc tatatctagt ggtttttcaa acaaaacttc ggtaaaatga tcatcgttgt
     5581 ctaatttaac ttgaaagatc gttcttccta acatattagg tacgcctatc attacattat
     5641 cagatagtag taattttttt gcattttttt gaatatctat tattggtttt tttgatcgta
     5701 gttgatctat tatggaagaa gaataaatta ataatgtttc gtacaaatta attttcaaat
     5761 ttcttgaaag ctttcctttt atcatgttaa ccacattgta aaaggttatc tcatctatct
     5821 tatctctgta ttcaaaacaa agataagaag gaggaatatc tgattctcct ttaaattgta
     5881 tcttaatttg gatcattatt tttatctttc tgggacctgg gctttaggtc cattaccaaa
     5941 gtcatacgta tgaccttttc ctctatagaa tttaggtctc actggatttc catctttttc
     6001 tcctttcttt gttagagata atccggccat aagttctaca atcagcctat tggccaagcc
     6061 agatgtaatt cctccattat atgaatttac gtcactcacg tcataggtag gtgaaacctc
     6121 cacaaggtca aatccgaatc tatccggatc gaatgatgtg gacaatagtc tcattaatcg
     6181 catgccttct ctagatgtca aaccattggg ttcaggttct ccagttcctg gagcatatgc
     6241 tggatcaaaa gtgtctatat cccagcttag atatactgcg tctacattat catttgccct
     6301 gtcagcagct tcttttgcta tctgatcaat tcctaattcc tctacatcta gcatagtaaa
     6361 ccattgaaaa tcttgatctg ccatccattt gtacagatcc ggtccaggcc aatatcccct
     6421 tggaccgatt aatgtatagt ttttaccctt taaacatcct aattccatga ttcttcttat
     6481 atgtgcccca tgatcatatt tgaagccaca aagtccttgt ggagcacaat cagcgtgaca
     6541 atcgatatga atcataccaa tatttttgta ttttttagca agagctctta catttgcgaa
     6601 agtgatagaa tgatcacctc ccaaaataat tggagtagca tctatgtcta gaacttcttt
     6661 aaccttggca gtcattcgtc tatgagactc gattacatca cctggtgata ctacaacatc
     6721 tccatagtcg actgttttaa acaccccaaa aggatctaca cctgtttcaa tattgaagtg
     6781 ttcataaggt ggagagggaa cagtggatgc cgctctaata gctctcggtc catatcttgt
     6841 acctggacga atagttgtac caaaatcaaa tggttctcct ataatagcca tgtccggctt
     6901 tacttttttt aattcctcaa aatttttcat ccatggcagt tttaaaaaag ttggaattcc
     6961 aacaaatata ggttcatcat ttcccttgta ggagtcacca taaaattcca ttcccatatc
     7021 taatcaatta ttaattcgtc ccaattattt ttaaatatta ctaattatat ttaatatttg
     7081 aaatcattgt tcaactgtca aatgttcgac agtcgaaact tgcattattt atttgtcttg
     7141 ttagatccgc aatattactt ttaataataa aagttttaaa aaacatatta tttatatatt
     7201 taataaatta ttactaattt acttggcaat aatcgatgca tatggaattg cagtacttgc
     7261 ttttatggca ttggttcttt cagttggtat actaacttct ttgcttgtaa aaaagagtag
     7321 caaaagatac atggtagcag gaaagagtct tcctcttttc tttattggta caatgttaac
     7381 tgcacaggcc gttgacggaa attcatcatt agggaatgtt gctttagttt atcaatttgg
     7441 tttctgggct ggtgcagcaa ttccaattgg attagcaacg tgtttaattc ttacagctac
     7501 tatctatggt cctagattaa ataagatgac aatgcttaca ttgcctgatt tttattttag
     7561 gagatatggt gttggtacag aaggcatatc atcggttata atgatgctta gttttattat
     7621 tctagtagca ggaaactttg ctgcaggtgg attcattctc tcaactgttt tacatatccc
     7681 cctattctgg gcaatgttga tagtatcttc tgctgttttg gtttatactt ttgctggagg
     7741 tcttttttct tctgcttata cagatatttt tcaagtatat cttactgtag gagcattttg
     7801 ggcaacattt ctcttctttg tgttagggtt ttctggaata gattttagca caatattagg
     7861 agctgctcca gaaggttttc tggatctttc cgggttaaca agtatggaga atggggcact
     7921 ggtcaattgg ggaggaattc ttgctctagg aataggagat gtagtagctt tagattttat
     7981 ggaaagagta ttttctgctc gcgaccctaa aactgcaagg aggggtgctc ttatggctgc
     8041 aggattaact atatctgtta ttgttccagt tagtatgatg ggcatagttg cattatacta
     8101 tcttcccaac attgcagatc cttatacagt ttatcctacc ttagcattag aacatttacc
     8161 tttcccgatc ggggctgcac tattaatggg cgtactagga gcttcaatgt ccacagcaaa
     8221 tggtggacta ttagcaatat ctagtgttat agctagaaat ctcatacaaa gagacatttt
//
LOCUS       DATIAS010000593         2093 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1332811, whole genome shotgun sequence.
ACCESSION   DATIAS010000593 DATIAS010000000
VERSION     DATIAS010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332811"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(548..1954)
                     /locus_tag="VLA74_11995"
     CDS             complement(548..1954)
                     /locus_tag="VLA74_11995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51474.1"
                     /translation="MRNRKIPVIIGIIIIFIVIIDLLMTRQVLAYTTDMEILMFILTV
                     IIGYGVGSWLLLGYITQVSKEIRAKSRIINIMHWTVIIIQFSLFLIISSMLFNNNSNR
                     FLSPLVFAVSSITGSIVLGVMTYKLISWYRLSRYKNLVILFYGIAAFTLASSILEDAG
                     TKLLLVQVVQEKSPPGAPIESSFLYKPSEKYDGEIIYKIVNPDTTFLYIIPNSSLIYY
                     NLLNSTVLPIAFVFRWIASTTLLRSLYQRVGKLSLLLWIILSLPLIFYLIGKAPGFFS
                     GESLAGVDEQYRYFFRLLFRIGTIGGNILFGLVFFIFVKSLASSKLKDYLIMVGIGDT
                     IVGISLSTSAIEPTYGVAAHSLVLLSSYLFSFGFYLSAISISNDISLRKSIKGSMNDL
                     VGTIGSTQMEQEIVKKVTKIIQRQQKEMEKQVGDFSSEVTETNLKDYVELAIKERDNM
                     SDRLDKKRFDKDNSESRI"
BASE COUNT          740 a          350 c          285 g          718 t
ORIGIN      
        1 ctctctaaaa ggagtattat gatagccact tcataagata cggttcagtc agagcctcac
       61 tctcatacgg agtatgttaa cttagaacct agccaacata caggaataaa caaactagaa
      121 gattttcata tcgtcagagc ctaaccaaac tatcattttt ttgtagaatc aagaattcat
      181 ctgttccaag aaaagccatc gttgtaggca tattcaaccc atcaattttt ttactacgtt
      241 gttatttagg tgtcttaatt tatatgtctt gtataagtta atcatgatat atgcaaatat
      301 gaagatctgt tatttaacaa gatattccaa tagttcaaaa ttatctttaa cagtttaatt
      361 ttaaaattta ataaaaaata atgagaaatt actttaataa taattaataa caacaataaa
      421 agatttcttc tcatgtcatc atttagttct ggatcaacat ttgatacatt ttgaattgtt
      481 tttttctttt tctttttttg gttacatttg tatatatatt attagtacca tgatgtatgt
      541 atatatacta gattctagat tctgaattgt ctttatcaaa tcttttctta tccagtcgat
      601 cactcatatt atctctctct ttgattgcta actctacata atcttttagg ttggtttctg
      661 taacttcaga ggaaaaatct cccacctgtt tttccatttc cttctgttgc ctttgtataa
      721 tctttgttac ttttttcact atctcttgtt ccatctgtgt agatccaatg gtaccaacta
      781 gatcattcat agatcctttg attgattttc ttaaagaaat atcattagat attgatattg
      841 cagaaagata aaatccaaaa ctaaacaagt acgaagatag tagtacaaga gaatgagcag
      901 caactccgta tgtcggttct atcgcagagg ttgaaagtga aataccaaca atagtatcac
      961 ctattcctac catgataaga taatccttta attttgacga ggccaaactt tttacaaata
     1021 taaaaaagac gagaccaaat agaatatttc ctcctatggt accaattcta aataaaagtc
     1081 taaaaaaata acggtactgt tcatctactc ctgctaaact ttcacctgaa aaaaagcctg
     1141 gagccttacc aatcaaataa aatattaatg gaagagacaa aattatccaa agtaacaacg
     1201 agagttttcc tactctctga taaagagaac gtaaaagtgt ggtagatgca atccatctaa
     1261 aaacaaatgc tatgggcagt acggtagaat ttaaaagatt atagtatatc agactcgaat
     1321 tcggtatgat ataaagaaat gtagtatctg gatttactat cttatatatt atttctccat
     1381 cgtatttctc agaaggttta tacaagaaag atgattcaat aggtgctcct ggtggtgact
     1441 tttcttgtac aacttgtacc aataataatt tggtacctgc atcttctaat attgatgagg
     1501 caagtgtaaa tgctgcaatt ccgtagaata agatgaccag attcttatac ctacttaatc
     1561 tataccatga aatcaatttg tatgtcatga ctcccagaac aatgcttcct gttattgaac
     1621 taaccgcgaa gaccaaagga gacaaaaatc tgttactgtt attattaaaa agcatagatg
     1681 agattatcaa gaataaggaa aattggatta taatcacagt ccaatgcatt atattaataa
     1741 tcctagattt ggctctgatc tccttgctta cttgtgtaat atatcctaat agtaaccaag
     1801 atcccactcc atatccaata atcactgtca aaataaacat aagaatctcc atatcagtag
     1861 tataagccaa aacctgacgt gtcatcaata ggtcaataat tacaataaaa attatgataa
     1921 ttccaattat aactggtatt tttctgttac gcataatagg tatttgaaga aacagatatt
     1981 tttcaaggta tatccatcgt gaaattaact taactgacca aaaagaatat tcaactttga
     2041 aatatttaaa gatattagat tattattata ctgcaatcca atatcttcta tct
//
LOCUS       DATIAS010000594         2897 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1604156, whole genome shotgun sequence.
ACCESSION   DATIAS010000594 DATIAS010000000
VERSION     DATIAS010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1604156"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..403)
                     /locus_tag="VLA74_12000"
     CDS             complement(218..403)
                     /locus_tag="VLA74_12000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51475.1"
                     /translation="MMSLTFHHYKILKQKNFHFGFDNSSNTDDMINYNNNLTTILKQE
                     LDKWKNFSFALKNQNRG"
     gene            complement(639..1547)
                     /locus_tag="VLA74_12005"
     CDS             complement(639..1547)
                     /locus_tag="VLA74_12005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSF51476.1"
                     /translation="MNWNKYNESLVKRGEVLLDFDVIDNWDNELEEMNKGKEGRKFVY
                     PDSFIKLLGYMRAYFHLPYRQTEGIVRAHAANTLPSIPDYSRICRRINRLNIKINDDN
                     DDVNNNSSLQHDDYFIIAIDSTGIKVSNRGEWIRHKWNVKRGYLKIHVAVDIKKKRIL
                     SLIVTSEQVHDGKVLPQLIDDITIKQNKVIDTAIMDGSYDSNKNFQLLSFKGIQSAIK
                     VRKNSRCKKTNHYLRNKNVQLQKTNMKQWKDSVCYGQRWIVETVFSCIKRLFGEYVTA
                     IRFENIIKEIILKASLYNWFQSITAN"
     gene            complement(1655..2071)
                     /locus_tag="VLA74_12010"
     CDS             complement(1655..2071)
                     /locus_tag="VLA74_12010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51477.1"
                     /translation="MSEGDHHVTDNTTKFLYAFTQSILNSDRSIRWVAITDQDGIILN
                     EQNREEGFESLLTKEENQESAINTIIRQKTRTKFEPKIGKLSYAFGRYQKLSRCLIPI
                     SENFYLILTMDFEENNFDKIIMEKIIPLVKQEKEKF"
     gene            complement(2188..2532)
                     /locus_tag="VLA74_12015"
     CDS             complement(2188..2532)
                     /locus_tag="VLA74_12015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51478.1"
                     /translation="MLLEIFIMWGCVDLKDCFSAGDLSNIASTYIGIIIGALVGGFIS
                     WLIYNRQEKTAVIQKEIQDHILNLEEKHEISLEKHENILEKIQIVEQNHEEMLKNIFT
                     LDKKINSLLESK"
BASE COUNT          930 a          479 c          353 g         1135 t
ORIGIN      
        1 aatatattta ataaatctgg atcatcatcg attatggcta tggatttagt aaacattata
       61 gagtatagat ttaaacgtaa aaaatctatt taagcatgat cggtattctc ttttttgaaa
      121 attttgctta tacaatgcta tacttaaagc agttaacgaa taacaacaaa aataacaaaa
      181 gaagaggagg ttcattgagg ctcatatgct ttacacacta tcctctattc tggtttttca
      241 atgcaaaaga gaaatttttc catttgtcta attcctgttt taatatggtt gttagattat
      301 tattataatt tatcatatca tcagtattag aagaattatc aaacccaaaa tgaaagttct
      361 tttgttttaa aatcttataa tgatggaatg ttaatgacat cataatagga tatattctaa
      421 tcgggttaac agtattagaa caattcaact gccttgttga aatgtaaatt ccccattttc
      481 atttatacct ccacattctg aacaaaaaag ttgaatatca tctaacttgt gtgtcatttt
      541 atctagtcca ttaaaaacct agtaaataag ttgtggtaaa tcatgctttg ttgcgcaatt
      601 cttaaccaat ccttttacta ttctagtata attgacaatc aattagccgt tatactctga
      661 aaccagttat acaatgatgc ttttagtatt atctccttta taatgttctc aaatctgata
      721 gcagtaacat attctccaaa taacctcttg atacatgaaa agacagtttc tacaatccat
      781 ctctgtccat agcacacact atccttccat tgtttcatat tggttttctg tagttgtacg
      841 ttcttgttcc tcaaataatg attagtcttt ttacatcgag aattctttct tacctttata
      901 gcagattgaa ttcctttaaa cgataataat tggaaattct tgttactgtc ataagaacca
      961 tccatgatgg cagtatctat tactttattc tgctttattg ttatatcatc tatcagttgt
     1021 ggtagtactt tgccatcatg tacttgttca ctggttacta ttaatgatag gattcttttc
     1081 ttttttatat caactgctac atgtatcttt agataacctc ttttgacatt ccacttatgt
     1141 ctaatccatt cacctctgtt tgagaccttt atgccagtag aatcgattgc aattataaaa
     1201 taatcatcat gttgtaaact ggagttgttg ttcacatcat cattatcatc atttattttg
     1261 atattcagtc tatttattct tctacaaatc ctactataat caggaattga tggtaatgta
     1321 tttgcagcat gagctcgtac aataccctca gtttgtctgt atggtaagtg aaaataagcc
     1381 ctcatgtaac ctaataattt gataaatgaa tctggatata caaattttcg accttcttta
     1441 cctttattca tctcttctag ttcattatcc cagttatcta taacatcgaa atcaagtaat
     1501 acctcaccac gtttaacaag agattcattg tacttgttcc agttcacata atatgactag
     1561 aataagttag ctaaatgtat taggaatagt gagttacgca acaatgcagt aaatcaaatt
     1621 atgaaacact acaaataaaa tttaattgtc atatttagaa tttctctttt tcttgtttaa
     1681 ctaaaggaat aattttttcc attattattt tatcaaaatt attttcctca aaatccatag
     1741 ttaaaatcaa ataaaaattt tcactgattg gaatcaaaca tctgctcaat ttttgatatc
     1801 ttccaaatgc ataacttaat tttcctattt ttggttcaaa tttagtcctt gttttttgtc
     1861 taattattgt atttattgca gattcctgat tctcttcttt agtaagaagt gattcaaatc
     1921 cttcttctct attttgttca tttagaataa taccatcttg gtcagttatt gctacccatc
     1981 ttatagacct gtcagaattc aatatacttt gggtaaaagc ataaaggaat tttgtagtat
     2041 tatcagttac atgatgatct ccttccgaca tatttgtgta tatttaataa gtaaatttcg
     2101 attgtaataa aagagatctt ttactattat agttagttaa aaaaattgac tagaaagaaa
     2161 taaaattaat tctcttcgag attattatta tttactttct aacaatgaat ttattttctt
     2221 atctaacgta aaaatatttt ttaacatttc ttcatgattt tgctcaacta tttgtatctt
     2281 ttctaaaata ttttcgtgct tttctagact aatttcatgc ttttcttcta agtttaatat
     2341 gtgatcttgt atttcctttt gtataactgc agttttctct tgtctattgt atatcaacca
     2401 actgataaag cccccgacta atgctcctat tataatacct atataagtag aagcaatatt
     2461 ggataaatcc cctgcactaa aacaatcttt caagtcgaca catccccaca ttatgaatat
     2521 ttctaataac atattacatg aacatgattc gttgcttttt attttattga tttgtaaagc
     2581 ccgtgtaaag tcacctaacc cgttctgcta ctactgtaaa atcaatatgt accaaacgat
     2641 ataaatagaa aaaaacagtg tcttctatcc gtagtgaata atctaaatct gctctttgtc
     2701 tttctcattg taggacattt agaaatgagt tcataataga tttagaatga taaaaaaaga
     2761 acgctcttat ttctgaatgt ttcagctacc tgttacaaag aatctccatg aatctttcct
     2821 ttcttgtctt tgttctatta ttatgaataa actgaaatgt cttggaatat gcctgtaaat
     2881 tgtacttgtt tacaccc
//
LOCUS       DATIAS010000595         2527 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_516366, whole genome shotgun sequence.
ACCESSION   DATIAS010000595 DATIAS010000000
VERSION     DATIAS010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516366"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            499..822
                     /locus_tag="VLA74_12020"
     CDS             499..822
                     /locus_tag="VLA74_12020"
                     /inference="COORDINATES: protein motif:HMM:NF025601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4342 domain-containing protein"
                     /protein_id="HSF51479.1"
                     /translation="MTSCKDCDTEIPLNSKFCLNCGTQIGIKRDVYQVSGENLIGKVK
                     EMMQGANVRRIIVKDEKGKVLVSIPITWGTAGIVATIALAPWLAALGVIAGVVTKCTV
                     EVEKA"
     gene            982..1137
                     /locus_tag="VLA74_12025"
     CDS             982..1137
                     /locus_tag="VLA74_12025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51480.1"
                     /translation="MNGDDNDSRIREIINDSIRYLEIYLNNLNDQKIPQSSKNMENNK
                     KANLKKK"
     gene            1340..1537
                     /locus_tag="VLA74_12030"
     CDS             1340..1537
                     /locus_tag="VLA74_12030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51481.1"
                     /translation="MDTYSTDKTVSKKRNRKVVDNKKLVIELKQHLQNLDYDNHESLL
                     NNLREIRNNLMIMVKKTILKR"
     gene            complement(1655..>2527)
                     /locus_tag="VLA74_12035"
     CDS             complement(1655..>2527)
                     /locus_tag="VLA74_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HSF51482.1"
                     /translation="FVVGDKTFKVRMLPSAALNTKTKLAVGAGVLVNPEVLIQEITSF
                     NAHKRTFIDGNCGIISKEHIRKDLSTNHLKNNIGTTGTGTGPANSDRALRILTLAKDQ
                     AELKDYISDVSSMIHFHLDKKEDVLIEGTQGTFLSLFHGGYPFVTSKDVTASSICADV
                     GIGPKNVDDVLVVFKSYVTRVGAGPLENELDRDESVKRGWLEFGSVTGRERRSSPFNI
                     EMAKKAIRLNGATSLAITKMDVLYPQTAGITEYTKLPINSRNFIENIESELGLKVVLI
                     GTGADVNAVIDRRK"
BASE COUNT          902 a          387 c          423 g          815 t
ORIGIN      
        1 atattttacg aaatagatta ctggaattcc ccccatgaat tcggtttgta cagaaaaaat
       61 atgtacatca ttaagatgaa cggaaaagga cggtagagga gagcgctcta aagcgcaaac
      121 gagtctacca aaattattta aatctaatat ttcaacgtag aagggtgatt ttaattccaa
      181 gcaagtatct tcaaagatga aggtaattaa tatttatgca aaatttctta gttgaggtga
      241 agtccactcc gggtcagcca tttgctgaat tttttctcta tgaattcttt aaatttttct
      301 aaattgtatt attgataaag tatattaaaa ttcaaaattg agaatgattc ataatttgtc
      361 agaatgaatc ataatttgac aatcaatttc tacctttgcc atatgaaaat ggcaagaatt
      421 ttatatttag tttatctttt aaaggtcgat aacaaatatt acgataaaga aataaacttg
      481 aagttctaac tactatatat gacaagttgt aaggattgtg atactgaaat tcctttaaac
      541 tcaaaattct gtcttaattg cggaacacaa ataggaataa aaagagatgt ctaccaagtt
      601 tcaggcgaaa atcttatcgg aaaggttaaa gaaatgatgc agggtgcaaa tgttaggaga
      661 attatagtaa aggatgaaaa gggtaaggta ttggtttcca ttccaattac ttggggtaca
      721 gctggtatcg tagcaacaat tgcgttggca ccctggcttg ctgcattagg ggttatagca
      781 ggtgttgtaa cgaaatgcac agtagaggta gaaaaagcct aaatgttagg ataaaagttg
      841 aatttctttt taaagattaa atcaaaaaga gacagtatta ttatcctcaa atgatcctat
      901 gatatatgtt tttggagttt ataagcattt aaatcattat cattatattg ttgggtagta
      961 gatgtatcaa cgataattat attgaatggt gacgacaacg acagtagaat cagagaaatt
     1021 atcaatgaca gtatcagata tcttgaaatt tatcttaaca acttaaatga tcaaaaaatt
     1081 ccacaaagtt ccaaaaatat ggaaaataat aagaaagcaa atttaaaaaa aaaatgaaag
     1141 aaatgcaaga aatataaaaa ataagagtta ttctactaat aaagatgtac ttcaaacttc
     1201 aaacaaggat aatcccataa ataataatat aaaatatgag caagaaaaaa cattcaatga
     1261 gaatgaatac aatatatgga aagcatatag ttggatcgaa tattctatac tgcagctcag
     1321 attaaaaaaa tacaatttaa tggatactta ttccactgat aagaccgtta gtaaaaaaag
     1381 gaatagaaag gttgtagata ataaaaagtt ggttatcgaa ttaaagcaac acttgcaaaa
     1441 tttggattat gataatcatg aatctctttt aaataattta agagaaatca gaaataattt
     1501 gatgataatg gtaaaaaaaa caatccttaa aagataaatt ggtattgcta ttttttaagt
     1561 ttattattaa ttacgccggg tcgttatact ttttctatag atatcacgta tagctagttg
     1621 aagtatgtct caattattga ataattttgt agtcctattt ccttctatct atcacagcat
     1681 ttacgtccgc accggttcca attagaacta ctttaagacc tagttctgac tcgatgtttt
     1741 caataaaatt tcgtgaattg attggaagtt ttgtatattc cgtaattcct gcagtctgag
     1801 ggtataaaac atccattttt gttatagcaa gactagttgc accattgaga cgaattgctt
     1861 tctttgccat ctcgatgtta aatggtgacg acctccgttc ccgtccagta acgcttccaa
     1921 attctaacca tcctcgcttg acagactcat ctctatccaa ttcattttct aatggacctg
     1981 cacctaccct ggtaacataa gatttgaata ccaccaagac gtcatctaca ttttttggac
     2041 caatgcccac atctgcacat atagaggatg cagttacatc ttttgatgtg acgaatggat
     2101 agccaccgtg aaatagtgag agaaaagttc cttgtgtccc ttctataaga acatcttctt
     2161 ttttgtccaa atggaaatga atcatagagc taacatcaga aatataatct tttaattcgg
     2221 cctgatcctt ggctaatgtt aatattcgta aagctctgtc ggaatttgca ggtccagtac
     2281 ctgtaccagt cgttcctatg ttatttttta aatggtttgt agaaagatcc tttcgaatat
     2341 gttctttgga aattataccg caatttccat caataaaggt tcttttgtgt gcgttaaatg
     2401 atgtaatttc ttgaatcaac acttcgggat taactaaaac ccccgcacca actgccaatt
     2461 tcgtttttgt attgagagca gcactaggca gcatcctaac tttgaatgtc ttgtcaccca
     2521 ctacaaa
//
LOCUS       DATIAS010000596        21672 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_516548, whole genome shotgun sequence.
ACCESSION   DATIAS010000596 DATIAS010000000
VERSION     DATIAS010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 21672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21672
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516548"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1213..3123)
                     /gene="gatE"
                     /locus_tag="VLA74_12040"
     CDS             complement(1213..3123)
                     /gene="gatE"
                     /locus_tag="VLA74_12040"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase subunit GatE"
                     /protein_id="HSF51483.1"
                     /translation="MTINSKEIIVKVGFEIHQQLLTKNKLFCNCSCTETQDYNSSFLR
                     KLRPTQSELGLYDQASMFEFSKMQTIKYYSSFGSTCLVEADEEPPHEINKDALETALI
                     ISLALYSKIVDEINVMRKIVIDGSNTTGFQRTMLISYGGYLQVDDKKIGVQTICLEED
                     SGKLLYDDGNIKEFGLDRLGIPLVEIALEPVTGNPSEIMKIALTLGRLLRASKRVARG
                     IGSIRQDVNISINNGNGIVEVKGVQRLDQLIKVIEHESIRQHGLMLIAEKLKKVRKVD
                     EPLTGDKILEISNILKDSESKTIKKLLRNKNNSINAIRVKSFKGFFGFEPYPGVRIGK
                     ELGELVRFYGFGGIFHSDELPNYGITEQEVKKIKEKLEIIDEKDGFIMVGGPKEKMSI
                     AIDAICKRLDIVKFGVPSETRSASIDGKTIYSRPKPGSARMYPETDIPVYTITNDLLG
                     SLIEKVPKSWNEIIKQLSKKYQMNEILSEKIFDSNYFEVFEEISSSTQIPPSFIASKL
                     TEDVINLERQGFDSSVLTKDIITNIFKKLDSNKIAKESVFLIFEKLMKKETSTVESTI
                     DLLGIKSISDEELDKILDKIIEENLYIIQEKGMDSISTLMGKTMATLRGKVDGKKIND
                     LIKYKIKKILTR"
     gene            complement(3170..4570)
                     /gene="gatD"
                     /locus_tag="VLA74_12045"
     CDS             complement(3170..4570)
                     /gene="gatD"
                     /locus_tag="VLA74_12045"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase subunit GatD"
                     /protein_id="HSF51484.1"
                     /translation="MIITYLMSKDDNVGSILKNTKTGEVINVVLTDETAVTGRLMPGY
                     EYGKKDHIVIKLNNGYNIGIKIERIKSIHLISSTNLENKTSSYKNVKYANGNNHFSNT
                     IRLTDSDQPKILLLSTGGTIASKIDYRTGGVTSVLSAQDLYSSVPEISDYAKIDTEIL
                     INEYSENIGPNEWNIIINKIIEKINLGMYQGIIISHGTDTMSYTASALSFALQNIPIP
                     VILVGAQRSSDRPSSDASSNLIGAVICASRLDYSGVFVVMHSGMSDDVVACHIGTRVR
                     KNHTSKRDAFRSIDVSPVATIKKNQIYLNHEVVSNIILKKRSVEYEKGKVKYQIFGSK
                     FDNRVFLLKYYPGFNPMLIEYVVSQGNKIVIIEGTGLGHINKNCISYLKKAIDLGVLV
                     FMTSQCIWGRTNMNVYDTGRDLLKIGVIPLSNMLSETAVVKAMWLLANESNYTSIIKI
                     MQENISNEIIPISHIL"
     gene            complement(4608..5147)
                     /locus_tag="VLA74_12050"
     CDS             complement(4608..5147)
                     /locus_tag="VLA74_12050"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000309 - nicotinamide-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide adenylyltransferase"
                     /protein_id="HSF51485.1"
                     /translation="MLTGLFIGRFQPLHYGHIETIKSVLKTVDFLIIIVGSAQNSHEL
                     RNPFTAGERIQMIRNTLIKIKEIDISKILIIPVSDTKVHALWTYNIDLLVPKYDLVFT
                     NDPFTIVLYKERGIKIIQPELHHRKKFSGTLIRDYIIKDEDWKQLVHPETTKIIQDIN
                     GIDRLKKIWQKHKELFDIT"
     gene            complement(5255..5584)
                     /locus_tag="VLA74_12055"
     CDS             complement(5255..5584)
                     /locus_tag="VLA74_12055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51486.1"
                     /translation="MNFKSKPILIISVIYLIIFFALSSGLINAILEGSSLPEGITFIP
                     SRSVQTISETIIMTLILFVGMSGAFLVYKSGFAKTPKTQYGFLAGGFSVIILSMFIGL
                     SLINVKI"
     gene            complement(5919..7565)
                     /gene="thsB"
                     /locus_tag="VLA74_12060"
     CDS             complement(5919..7565)
                     /gene="thsB"
                     /locus_tag="VLA74_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HSF51487.1"
                     /translation="MSIQQGSAGGVPVLILKEGSTQTKGRDAQKNNVTAAKLIAEIVR
                     SSLGPRGMDKMLVDSLGDVTITNDGATVLKEIDVQHPAAKMMVEISKATDNEVGDGTT
                     SVVVLAGALIEKAEELISKDVHPTIIVDGYRKSAQKAIEILNKIAQKIDANDKESLIK
                     VAKTSMQTKLVSKEADELADIVVKAILQVVESVDSKNKVDIDDVKVEKKAGGSLRDTT
                     LIQGIVLDKEVVHGGMPKRIDKAKIALLNCALEIEKTEFDAKINISSPDQMKMFLEEE
                     NRMLKDMVEKIKSSGANVVICQKGIDDIAQHYLAKSDILTVRRVKESDMTKLARATNA
                     RVVNSIDDLTSNDLGSADLVEERKVETDKWVFVEGCKHPKSVTILIRGGSQRVVDEAE
                     RSIHDALMVTKDVLEKPAIVAGGGAPEAYVASKLREWTSTLIGREQLAAEKFAEALEV
                     IPLTLAENAGMDPIDAATDLRAKQSKGAKWMGIDARSAKITDMSKMDIFEPLSVKEQI
                     IKSATEAASMILRIDDVIASSKSPGGMPPGGMPPGGMGEM"
     gene            complement(7698..8180)
                     /locus_tag="VLA74_12065"
     CDS             complement(7698..8180)
                     /locus_tag="VLA74_12065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HSF51488.1"
                     /translation="MGDKKSVSALVTGGEASAGPPLGPALGPLGINVLQVVNTINEKT
                     KDFLGMKVPVKVEIDSETKKFTVEVGIPPTTALIAKEAGITKGSGTSGRDYVGNISMS
                     GIVKIARMKIDVSYALDLKNCSKEIIGSCVSSGVKVEDKPAKDLYTDINSGKYDSLFQ
                     "
     gene            complement(8276..8935)
                     /locus_tag="VLA74_12070"
     CDS             complement(8276..8935)
                     /locus_tag="VLA74_12070"
                     /inference="COORDINATES: protein motif:HMM:TIGR00405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor Spt5"
                     /protein_id="HSF51489.1"
                     /translation="MKNKKNLDDLDDIIDYDNNDENNKESNFNQDALLKSINSDVSDK
                     DIQKDPKNSTASKQEESKETQFKNKLLDSDSKFFAIRITGGQENIVANILQNKINSKK
                     INLRSILILEHFKGYVIVEASDSNVVYEALYGIRHVRGQIRGDLPFSDIEKYLIKKPV
                     VTELNVDDTVEVVAGPFKSMKAKITRVDYEKQEATVVLLDSPYQIPVTVDANYLKKIT
                     T"
     gene            9144..10148
                     /locus_tag="VLA74_12075"
     CDS             9144..10148
                     /locus_tag="VLA74_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSF51490.1"
                     /translation="MTESIQVNQLDLLDRKILNEIQWLFPLTDRPFLEIAQRHNTTEI
                     DIMNRISAMKENGLIRQINAIFDTRRLGYKSALIAFAVKPEKLDYVANEVNKHPGVSH
                     NYERNHEFNMWFTLAIPPHSEMKATLDKMASLDGIIKYRLLPTLKMYKIGVKLDMVND
                     DSINPKPTEGIKELNPEKIHLTELDKDFIRELQKDLEIIPEPFVKSAEKLSISTEELF
                     DKAREFEKDGIMRRYAAILRHRDAGFTANGMIVWKVPDNIIDKIGFKLATFSQVSHCY
                     RRPTYPDWEFNLFSMIHARSFDSAEKIAKEMSNIIRIYNYKILFSSREFKKERVKYFE
                     "
     gene            10217..10654
                     /locus_tag="VLA74_12080"
     CDS             10217..10654
                     /locus_tag="VLA74_12080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51491.1"
                     /translation="MLTSEIQLPDSKSIRLLEISDLAIMNELSYILKERIIESFRIDS
                     FTTSDPFNHNKNFRYSTIVDKENPNRIIAIMCIFEDSDKYSLNWKKIDIKRLQEIVIS
                     PDQAKELKNELMPKDTNNFYQLRVNGKVIGSIMFAFQICGLHD"
     gene            complement(10693..11367)
                     /locus_tag="VLA74_12085"
     CDS             complement(10693..11367)
                     /locus_tag="VLA74_12085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSF51492.1"
                     /translation="MKLIKKLEIQSIENIINFLNDRLVGRLATVDNNGYPQVIPMNFV
                     YIQTRNHKNHSALLNQHSIYMHSYPYGEKIDNIKRNSKVGFEVDQHIAFLPSYYFHPT
                     DASQADTLYISIVIKGESFIVENYEEKALALNALMEKYQKEGKYQRLDSKMRSVQEVT
                     VIKIVPIEIRGKYKIGQQWTSSYRLKIAASILAREKDEAIPILDIMGIEILPNNTLHI
                     QREPIL"
     gene            complement(11482..12207)
                     /locus_tag="VLA74_12090"
     CDS             complement(11482..12207)
                     /locus_tag="VLA74_12090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ERCC4 domain-containing protein"
                     /protein_id="HSF51493.1"
                     /translation="MSFRIVVDERERNSKVPKFLINNGVHVDFARLVVGDYIVSSEVA
                     IERKTIRDLVNSIYDGRLFVQCSDLLQFYSKPLLIVEGNILELKTDIENDIDYHQKEK
                     IALNKITQIYDALATVAIIFRIPIIHSPSAKYTSKFLISLSNKILQSNLFLNGPLIKK
                     IKKANHVQLQQLSILSSLPGIGDKLALKLLEKFKTPLKAINASTAELAMIPGFGIARA
                     EKIKKILDFEYEEKHLAYQKKLL"
     gene            complement(12270..12647)
                     /locus_tag="VLA74_12095"
     CDS             complement(12270..12647)
                     /locus_tag="VLA74_12095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit beta"
                     /protein_id="HSF51494.1"
                     /translation="MSQENELPPWLKEQISRLQQLQQNLQAIMMQKQQIELEIVETDR
                     ALEELNKTKPSDSIYKAAGPLLVKTEKDSVEKELSEKKELANTRVMVLGKQESRVKEN
                     LKEVENKINEMIKGASSNQQQQQ"
     gene            complement(12688..12960)
                     /locus_tag="VLA74_12100"
     CDS             complement(12688..12960)
                     /locus_tag="VLA74_12100"
                     /inference="COORDINATES: protein motif:HMM:NF011470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex subunit Pcc1"
                     /protein_id="HSF51495.1"
                     /translation="MKSFKAKINISFKLLPDKQNKDFIKSIFIALEPDIKILEIPSVK
                     LTSNEDKNFFSIDIIAREVSSFRSTINSYLRLVKTANCCLIESFDI"
     gene            complement(12941..13180)
                     /locus_tag="VLA74_12105"
     CDS             complement(12941..13180)
                     /locus_tag="VLA74_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L37"
                     /protein_id="HSF51496.1"
                     /translation="MVKRNVKSQMALKGLGVKFGATVRKRYGTVYKTLKQKRRCPTCS
                     SLRFDRIASGIWYCPKCNLKVASGAYDINIEKLQS"
     gene            complement(13184..14002)
                     /gene="rrp42"
                     /locus_tag="VLA74_12110"
     CDS             complement(13184..14002)
                     /gene="rrp42"
                     /locus_tag="VLA74_12110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000178 - exosome (RNase complex)
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex protein Rrp42"
                     /protein_id="HSF51497.1"
                     /translation="MSLSKKSPIIIEYLRKRQMLDLLNNKKRLDGRNLDDLRTLEIDL
                     DVIKKANGSALVRLGNSEVIAGVKVETGEPFEGLEHKGALIVTAEVLPTSSPFVEPGP
                     PDEDTIELARVVDRGIRESEMVDLEKLVLVHGKIVYTIFVDCSVINADGNLFDATSYA
                     VVCALASSKLPIFEIQNDQVVNTGNKQDPPITTLPVSITAIKIGNTIMLDPTAEEESC
                     MESRITITTNSNGEYTAIQKGSNGSFTLDQIKYVAEIARIKGEEIRKKIKELVK"
     gene            complement(14002..14757)
                     /gene="rrp41"
                     /locus_tag="VLA74_12115"
     CDS             complement(14002..14757)
                     /gene="rrp41"
                     /locus_tag="VLA74_12115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex exonuclease Rrp41"
                     /protein_id="HSF51498.1"
                     /translation="MNQTILVDENGKRTDGRSIDELREIKLTVGILKNANGSAFIEFG
                     KNKIIVAVYGPREVHPKHMAQPDKCVLRCRYHMSPFSTDTRKNPAPSRREIEISKVMR
                     EALEPAVVLEDYPRAAIDIFVEVLQADGGSRCAGITAASVALADAGINMRDLVAACAA
                     GKINDKIVLDINDVEDKEGSADMPVAYLPNLEQISLLQLDGVLTQSQFTECLEKAVQG
                     CKMVYEIQRKALMEKYFGNDIPIDEETSEEVKE"
     gene            complement(14779..15609)
                     /gene="rrp4"
                     /locus_tag="VLA74_12120"
     CDS             complement(14779..15609)
                     /gene="rrp4"
                     /locus_tag="VLA74_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000178 - exosome (RNase complex)
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex RNA-binding protein Rrp4"
                     /protein_id="HSF51499.1"
                     /translation="MLEIKRKYVIPGDVIIEGNYKPLMNVIRKENSIIATRIGIAESS
                     KDGIKVIPLSGIYIPRINDIVIGKIIDNSSLSWEVDINSCFSAHLPAQDVFGRDFSPA
                     RDDMKKRFAPGDLVTTRIIAFDRTRDPMLTIQERDLGRISHGEFLKISSTRVPRLIGK
                     RGSMIQTIEQATQTKILIGQNGILVVSGKNDEGISLAFKAIKMVEEEAHTSNLTQKVK
                     DLLNVKDELQQVESENNSSGNNEAYINSHNENNSKTNDVENNNDTNNEITKTSSGDSS
                     "
     gene            complement(15741..16430)
                     /locus_tag="VLA74_12125"
     CDS             complement(15741..16430)
                     /locus_tag="VLA74_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly factor SBDS"
                     /protein_id="HSF51500.1"
                     /translation="MTDNKSTIVRLAIDNDKFEILVKPDPALDYKLGKKIDISNILIS
                     DEIYADANKGTRIADEKLIRNFKTTDSIEIAKKILEQGEVNLTTDQRRRMVEEKKKQI
                     IQYINRNFVDPKTHLPHPPLRIQNAMEEVRLIIDPFKKPEDQTKKIIESLRKILPLKS
                     ENLQLLVTIPPQFSAPSYNVLKNIGQLKDEKWLQDGSLRVIVEINAGIKGTFVERMNS
                     VTKGSAQIQEQ"
     gene            complement(16526..16999)
                     /gene="rpsI"
                     /locus_tag="VLA74_12130"
     CDS             complement(16526..16999)
                     /gene="rpsI"
                     /locus_tag="VLA74_12130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HSF51501.1"
                     /translation="MERRIKEMTKTTTVDLYPGQRKTSRAVATISKGNGKIRVNNIPA
                     EVLQPEVSRELILTPVNIVGDLRNKVDINVKVAGGGFMGQAFATAVAISRALAGEAKG
                     DRDPKDHPLSKSIRQDIRKKINEFDRHLLAGDPRQTESKKFGGPGARRKKQKSYR"
     gene            complement(16984..17478)
                     /locus_tag="VLA74_12135"
     CDS             complement(16984..17478)
                     /locus_tag="VLA74_12135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HSF51502.1"
                     /translation="MDKSKKDINSNSSYANKNNSKNQIVVDVSSCIAGRVCSRVSKLL
                     LQGNRVTIVNSEKAMISGNRYKTIDDYKKRLEVSSITNPIHGPYHPRRPDRILTKMVR
                     GMTPRKKSSGISAFRRLRVYIGIPVEFRSNEIKIFDDTKITKPESYYITIGDIAKQIG
                     WKGE"
     gene            complement(17471..17845)
                     /locus_tag="VLA74_12140"
     CDS             complement(17471..17845)
                     /locus_tag="VLA74_12140"
                     /inference="COORDINATES: protein motif:HMM:NF028445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18e"
                     /protein_id="HSF51503.1"
                     /translation="MEHDKVTSMFTNTLNDNTKLSLRDAYKKSESAIWKSIEKKFESS
                     RSNRSEVNVSKLDNITKEGDIVIVPGKVLGSGIINHKIILSCFSISVAAMKKIIDCGG
                     EVITINELVEQYPDGKGVRIIG"
     gene            complement(17871..18524)
                     /locus_tag="VLA74_12145"
     CDS             complement(17871..18524)
                     /locus_tag="VLA74_12145"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF013366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit D"
                     /protein_id="HSF51504.1"
                     /translation="MTSSINILEKTDQKIILKFNNIPRQYLNAIRRISISEVPILAID
                     DVVILENSSVMHDEAVAHRLGLIPLRTELNRFILPDKCGCNNTLGCSKCRVLLILDSE
                     SSEKTKLVTSGDLVSEDEYVKPVSKNIPIITLAPGQKLKFEAYARLGIGKDHAKWQPT
                     TAAIVKDGNETNESILIIETIGSLTAEETVKAAINIINSKLNNFSTMIKSLDFQKGN"
     gene            19043..19543
                     /locus_tag="VLA74_12150"
     CDS             19043..19543
                     /locus_tag="VLA74_12150"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF51505.1"
                     /translation="MGVNEKIIFLGILGLGAIVGILTYTVFMGLEPTPGDTRSIYRKD
                     LPPDSAQASAGAEKSQINPASIKADVILTILEGAATQGNPDYDPKEMSVKKGDVIKVD
                     NKDTVPHTVTNGEGPNDSNSGKIFDTGITNAGEASIIDTQNIDPGDYAYYCTVHPYMT
                     GNLKLQ"
     gene            19644..20420
                     /gene="sufC"
                     /locus_tag="VLA74_12155"
     CDS             19644..20420
                     /gene="sufC"
                     /locus_tag="VLA74_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HSF51506.1"
                     /translation="MAFLEIKDLHASIEGKEILTGLNLKIEKNEVHAIMGPNGSGKST
                     FANVLLGHPKYSVNSGDIQVKGKSILELSTDERAKQGLFLGFQYPIEISGVGYSHFLR
                     NAYNTLNKSLMQDQKNREVFLTVKEFHEYIKRNLDDVGLDPSFLSRYLNEGFSGGEKK
                     RSEVMQMLVLKPNIAILDEPDSGLDIDAVKSVAEAINKLIDTGAGIVVITHYARILRY
                     LSKLDKVHVMAKGKIIKSGGKELSEELESKGYGWLGLDES"
     gene            20544..21218
                     /locus_tag="VLA74_12160"
     CDS             20544..21218
                     /locus_tag="VLA74_12160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chlorite dismutase family protein"
                     /protein_id="HSF51507.1"
                     /translation="MNSEKPVFLNFSFFKVDPKWRWLNEIGKEEAIKEFADLLEVANT
                     KMKVIPYSTVGLRDDADFMLWMISESVEKMQVFTSKIYLTVLGKYVEPSQIYLSCSRR
                     SVYSNQVKPGFTDDVNPLRYNIVYPFIKSREWYLLPFEKRKKMMDEHIEVGRKFPNIR
                     LNTSYSFGLDDQDFMLAFETDDLNSFQDLIIQLRETEVSRYVIKDTPMIVCVYKKIDQ
                     VIKSLG"
     gene            21215..>21672
                     /locus_tag="VLA74_12165"
     CDS             21215..>21672
                     /locus_tag="VLA74_12165"
                     /inference="COORDINATES: protein motif:HMM:NF020398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1802 family protein"
                     /protein_id="HSF51508.1"
                     /translation="MKRMIALKEWAIVCKALEDGKQILLLRKGGIMEFRRGFEIKHNE
                     FFLYPTYEHQSKNSIKDEYIPYLESLLYDRHDNEKKYDSNKNSINLFAQVYEIIEITD
                     RAILPKLQNYHIWNNEYVTMRINYNPTKPLNILLLRIFKIKEPLLVDIKD"
BASE COUNT         7017 a         3514 c         3206 g         7935 t
ORIGIN      
        1 gcacatacat ttttagctaa tagttatcaa tacatgtata ataaatgaga ccgtctaaag
       61 tagataatgc ctacaacaag gaaacagaca ctgatactag aagatacttt tggttagatt
      121 gatagtcaaa tacaaataac acataaaaga tttagcaaaa gaactacata gatatagaat
      181 tgggcataca aatggtacaa aaggtataat aagtgactgg atggattaaa agattagcca
      241 agtgatagac tttcggtacc acaagatgta atgataacga taagacaaga attatcagat
      301 agcggcacta gaaagatttt aaatacgcat tggatctgat atacagaaag attggagtac
      361 aatattatga agtacatagt tatagcttac tatacaaata ctactatagt ccaaaagtac
      421 cgaggaaaag atttggaaat attgcatcag ttaaggaaaa gaagatattt aaagaacaaa
      481 aagcattctg aagtatctag agcatgatta gactgtactt gtaaataatg aattcacctt
      541 tgtataagat tacgtaatca gaaaaaggga aaaggaatga atttctgcaa ttaaaaagat
      601 ctattataac ggtaacaggt tctcccaaaa gaacaactgt ttttggttgt ctttcaatag
      661 attcgaaaca gttattcaag atatatgaga aatttaacag tattacattt gttgactatc
      721 atctaaaaaa gtacgaaaaa gatttggtaa atttattgtg tttgtcgata tgacaaaacc
      781 tcatagttct aatatcacaa gaaaatttct tggtgggatt aagatactat aaaaaccaga
      841 atattttaca ctggtatggc tagaatttaa agcaatagag gaacgctgga gacaggcgaa
      901 atataccata ctttccagtt attatcttac ttttgatgat ttgaactatc taatttgtgg
      961 ttattatata cctatagatt caaacgatac tataaaagta tctatctgtc aatactataa
     1021 aagtatctat ctgtcaatgt ctacggatta atgttattaa tatgatcttg cttttgaaga
     1081 ttttattttt tcatgaaatg aaaaaagaca tggtttgcaa taaaaaaata accaatttga
     1141 atttgaggtt attaacatgg tcaaagaagg tataaaaata atttattgac aaattataat
     1201 atcaattatc aattatcgtg ttaaaatttt ttttatttta tattttatca ggtcattaat
     1261 ctttttacca tctacttttc cacgaagagt agccatagtt tttcccatca aagtacttat
     1321 tgaatccatt cctttttctt gaataatgta aagattttct tctattattt tatctaaaat
     1381 tttatcaagc tcttcatcac ttattgattt tattccaagt agatctattg tagattcaac
     1441 agtagatgtt tcttttttca ttagtttttc aaaaatcaga aagacggatt cttttgcaat
     1501 tttatttgaa tctagtttct taaagatatt tgtaataata tcttttgtta agacagatga
     1561 atcaaatcct tgtctttcta aattaattac gtcttctgta agttttgaag caataaaaga
     1621 aggaggaatt tgtgttgagg atgatatttc ctcgaaaact tcgaaataat ttgagtcgaa
     1681 aatcttttcg cttaatattt cgttcatttg atatttttta cttaattgtt ttattatttc
     1741 gttccatgat ttgggaactt tctcaataag agaacccaaa agatcgttgg ttatagtgta
     1801 gacgggtata tctgtctccg gatacatcct agctgatcca ggttttggtc tactatagat
     1861 agtttttcca tctatagatg cagatctggt ctcggaggga actccaaatt ttacaatatc
     1921 cagtctcttg catattgcat caatagcaat agacatcttc tctttaggtc ctccaaccat
     1981 tatgaaacca tctttttcat caataatttc taatttttct tttatttttt taacttcttg
     2041 ttctgtaatt ccataatttg gcaactcatc cgagtgaaat ataccaccga aaccataaaa
     2101 gcgtaccaat tctcccaact cttttcctat tcttacacca ggatatggtt caaaaccaaa
     2161 aaaaccttta aaacttttga ctctaattgc attaatactg ttattcttat tccttaatag
     2221 tttcttgatc gtttttgact ctgaatcttt cagaatattg cttatttcaa gaattttgtc
     2281 tcctgttaat ggctcatcaa cttttcttac tttttttaat ttttctgcta ttaacattaa
     2341 accatgttgt cgaattgact catgctctat cactttgatc agttggtcta atctttgtac
     2401 tccttttact tcaactatcc cattcccatt gttaatagat atattaacat cttgtctaat
     2461 acttcctata cctcttgcta ctcttttact tgcacgtaat aatcttccca aagtaagtgc
     2521 aatcttcatt atttcagatg gatttccagt aactggctct aatgcaattt ctaccaatgg
     2581 gattccaagt ctatctaatc caaattcttt aatgtttcca tcatcatata acaattttcc
     2641 agaatcttct tctaggcaaa tcgtttgtac tcctatcttt ttatcatcaa cctgtaaata
     2701 ccctccatat gaaattaaca ttgttcgttg aaatccagtt gtattagaac catctataac
     2761 tatttttcgc attacattga tttcatccac tattttagaa tacaatgcta aagaaataat
     2821 taatgcagtt tctaaagcat ctttatttat ttcatgtggt ggttcttcat cagcttcaac
     2881 tagacaagta gatccaaaag aagaataata tttgatcgtt tgcattttag agaactcaaa
     2941 catactagcc tggtcatata acccaagctc actttgagta ggacgtaatt ttctcaagaa
     3001 agatgaatta tagtcttgag tttctgtgca actgcagtta caaaataatt tattttttgt
     3061 taacagttgt tgatgaatct cgaaaccaac ttttacgata atttcttttg aatttatagt
     3121 cacaacgatt atgatataaa atgtatattt taatcattgt gagaattatt tatagaatat
     3181 gagaaattgg aataatttca tttgatatat tctcctgcat tatttttata attgaagtat
     3241 aattgctttc attagctaaa agccacattg cctttactac agcagtttcg gaaagcatat
     3301 tggacaatgg aattactcct attttgagta aatctcttcc agtatcataa acattcatgt
     3361 tggtcctacc ccaaatacat tgtgatgtca taaatactaa tactcctaag tcaattgctt
     3421 tcttcaggta agaaatgcaa tttttattta tatgtcctaa cccagttcct tcaataatga
     3481 caatcttgtt tccttgacta acaacatatt ctatcaacat tggattaaaa cctggataat
     3541 attttaataa aaatactcta ttatcaaatt tagacccaaa aatttgatat tttactttac
     3601 ccttttcata ttcaacagat ctctttttca gaataatatt tgaaaccact tcatgattta
     3661 agtagatttg attcttctta atagtagcaa caggcgagac atcaattgat cgaaatgcat
     3721 ctcttttgct tgtgtgattt tttcttactc gtgttccaat atgacaagca acaacatcat
     3781 cagacatgcc agaatgcatg acaacgaata ctccggaata atctagtcta cttgcacaga
     3841 taacagctcc tattaaattt gaagatgcat cagaagaagg tctatcagaa gatcgttgtg
     3901 cacctactag tattactgga attggaatat tttgtaatgc aaaactcaat gcagaggcag
     3961 tataactcat agtatcagtt ccatgtgaaa taataatccc ttggtacata cccaaattta
     4021 ttttctctat gatcttgtta ataattatgt tccattcatt cggtcctata ttttcactat
     4081 attcgttaat caaaatttca gtatcaattt ttgcatagtc tgatatttcc ggaacagaac
     4141 tataaagatc ttgagctgaa agaacagatg tgacacctcc agttcgataa tctattttac
     4201 ttgcaattgt ccctcctgta cttaataaca agattttagg ttggtccgaa tccgttaatc
     4261 taatagtatt agaaaaatgg ttattaccat tagcatattt aacattttta tatgaggatg
     4321 ttttgttttc taaatttgta gatgaaatca aatggatgga tttgatccgt tctattttta
     4381 taccaatatt ataaccgtta tttagtttta ttacaatatg atctttctta ccatactcat
     4441 atccaggcat taatcttcca gtaactgcag tttcatcagt taaaacaaca ttaataactt
     4501 caccagtttt ggtatttttt agtatggacc caacattatc atcttttgac ataagataag
     4561 tgattatcat agataattat aacctaatcc cataataata ctaaaattta ggtgatgtca
     4621 aataattctt tatgtttttg ccagattttt tttagtctgt ctatcccatt tatatcctga
     4681 attattttgg tcgtttctgg gtgtactaat tgtttccaat cttcatcttt gattatataa
     4741 tctcttatta atgttccaga aaattttttt ctgtgatgta gttctggttg aattatcttt
     4801 attcctcgct ctttatataa tacaattgta aacggatcgt tagtaaaaac tagatcatat
     4861 tttgggacca ataaatcgat attatatgtc caaagcgcat gcacttttgt atctgatact
     4921 ggaatgataa gtattttact aatatcaatc tccttaattt tgattagagt atttcttatc
     4981 atttgaattc gttcgccagc tgtaaatgga tttctcaatt catgactgtt ttgtgcactt
     5041 ccaacaataa taatcaagaa atcaacagtt tttagaacgg atttgatagt ttcgatatga
     5101 ccgtaatgta atggttgaaa acgacctatg aataatcctg tgagcatcaa tagtgaaata
     5161 atggtgaaat aaataaatgt taatttagaa atacatttta tgttagtata aaaaaatatt
     5221 ttattttgat agttgcttgc tagtttgatg tcaattaaat tttgacatta atcagagata
     5281 atccaataaa catcgatagt ataattacag aaaatcctcc tgccaaaaat ccgtactgag
     5341 tttttggtgt tttagcaaac cctgatttgt agactaaaaa agccccactc attccaacaa
     5401 aaagtatcaa tgtcataata attgtttcgc ttatagtttg tactgaccta gaaggaatga
     5461 aagttattcc ttcaggtaaa cttgagcctt caagtatagc atttattaaa ccagaagata
     5521 atgcaaaaaa tataattaga taaattactg atattataag tattggtttt gacttaaagt
     5581 tcaacaagaa agcatgcatg tataagtata aatactttta ttaaagaatt cttaattcct
     5641 gagttctatt tgttaaagct tttaatatca atatgtatat aatagaagac aaatatattg
     5701 aaatgtatta tttgttcggc tgaatgtttt aataaaaaat attgttttaa tcataatcta
     5761 gcattaaaaa gtctcaaaaa aggatacata aaatggtaca atgcattttc aagcaatata
     5821 tcttgggatg aatatttatc aagattattg aaaattgaag atactggaat ttggataatg
     5881 gatattatta actatgaatt agaaaaaaaa tgaggatatt acatttcacc cataccacca
     5941 ggaggcatac caccaggagg cataccacca ggagatttac ttgatgcaat tacatcatca
     6001 attcgtagaa tcattgatgc cgcttctgtc gcagatttaa ttatttgttc ttttacactt
     6061 aaaggttcaa agatatccat tttggacata tctgtgattt ttgcgcttct tgcatcaatc
     6121 cccatccatt ttgctccttt actttgtttt gctcttagat cagttgctgc gtcgattgga
     6181 tccatacctg cattttctgc caatgtaagt ggtattactt ccaaggcttc tgcaaatttc
     6241 tcagctgcta attgttctct tccaattaat gtactagtcc attctcttaa cttgctagca
     6301 acataagctt ctggagctcc accacctgca actatcgctg gtttttctaa aacatctttt
     6361 gttaccataa gtgcatcgtg aatagaacgt tctgcttcat ctactactct ttgagatcct
     6421 ccccttatca agattgttac cgattttgga tgtttacatc cttcaacgaa aacccattta
     6481 tcagtctcta cttttctttc ttctaccagg tctgcacttc ccaagtcatt agaagtgaga
     6541 tcgtcaatgc tgtttactac acgagcgttg gtagctcttg ccaatttggt catatcactt
     6601 tcttttactc tacgaactgt caatatatct gattttgcca aataatgctg ggcaatgtcg
     6661 tcaataccct tttgacaaat aactacatta gctccagaag atttaatctt ttccaccata
     6721 tcttttagca ttctgttttc ttcctcaaga aacattttca tttgatctgg tgaactaatg
     6781 tttatttttg catcaaattc ggttttttct atttctaaag cacaatttaa taatgcaatt
     6841 ttagctttat ctattctttt tggcatgcca ccgtgtacca cttctttgtc aagaactatt
     6901 ccttgaatta aagttgtatc tctcaacgat cctccagctt tcttttctac ttttacatca
     6961 tctatgtcta ctttattttt agaatcaacg ctttctacaa cttgtaaaat tgccttaact
     7021 acaatatcag ctaactcatc tgcttctttt gatactaact ttgtttgcat tgatgttttt
     7081 gctactttaa ttaaactttc tttatcattt gcatcaattt tttgtgcaat tttattaaga
     7141 atttctatcg ctttttgagc actctttcta tatccatcta caattattgt tggatgcaca
     7201 tcttttgaaa tcaactcctc tgctttctca attaaagcgc cagccaaaac aacaacagaa
     7261 gttgtaccgt ctccaacctc attgtctgtt gccttactga tttctaccat catttttgcc
     7321 gcaggatgtt gtacatctat ttctttcaga acagttgcac catcattagt aattgtaaca
     7381 tcacctagag aatccaccaa catcttgtcc attccacgtg ggcctagact tgagcggacg
     7441 atttcagcta ttagctttgc tgcagtaacg ttgttctttt gagcatctct accttttgtt
     7501 tgagtagatc cttcctttaa tattaacact ggtacaccac cagctgaacc ttgttgaatt
     7561 gacatttatc attttcacct taaaattaat tctaaagaaa ctgacagaat ttgggatatt
     7621 ttaattttat gccatatata acattatatg aaatagtttt gcaagttttt ttagtattaa
     7681 aaaatagtta aatttgtcta ttgaaataag gaatcatatt ttccagagtt aatgtcagta
     7741 tacagatctt ttgcaggttt atcctcaacc tttactccgc tactaacaca agatccaata
     7801 atctctttag aacaattctt caaatctaaa gcataagata catcaatctt cattcttgca
     7861 attttgacta tgccggacat tgaaatattt cccacataat cccttcctga tgttccagaa
     7921 ccctttgtaa ttccagcttc ttttgcaatt agagcagttg taggaggtat tcctacttcg
     7981 acagtaaatt ttttagtttc agaatcaatt tccaccttaa cgggaacctt cataccaagg
     8041 aaatctttgg tcttttcatt gattgtgttt acaacttgta atacgttaat ccccaaaggc
     8101 cctaatgcag gtcctaaagg aggtccagca ctggcttctc ctccagtaac taaagcagat
     8161 actgattttt tatcgcccat atcggaaaaa ataatagtcc gaaatataaa tggtcatcaa
     8221 attttaagat ctataaaaat aatatactga gcaaaaatat attaaattat gaatatcaag
     8281 tggttatttt cttcaagtaa tttgcatcaa cggtaacagg gatttgatat ggcgaatcta
     8341 atagtacaac agtagcttct tgcttttcat aatcgacacg tgtaatcttt gctttcatgg
     8401 atttaaatgg acctgcaact acttcgacag tatcatcaac attcaattcg gtaacaactg
     8461 gttttttgat aagatatttt tcaatatcac taaaaggaag atcacctcgt atttgtcctc
     8521 ttacgtgcct aataccatat agtgcttcat acacaacatt agagtcggat gcttcaacta
     8581 tcacgtaacc tttaaaatgt tcgaggataa gaatcgagcg taagttgatc tttttagagt
     8641 ttatcttatt ttgtaatata ttagcaacaa tattttcctg tcctccagtt attctaattg
     8701 caaaaaattt tgaatctgaa tctagtaact tatttttaaa ttgtgtttct ttagattctt
     8761 cttgtttgga tgcggtagaa tttttagggt ctttttgaat atctttgtca gaaacatctg
     8821 aatttatact ttttaataag gcgtcttgat taaaatttga ctctttatta ttttcatcat
     8881 tattgtcata atcaattata tcatccagat catccagatt ttttttattt ttcattaatt
     8941 tttattcaat acttaacgat tagaagcatt ttataaattt aatttatgtt aaatgttata
     9001 aaatattagt ataaatttaa taattattta aaaaagagat taaaaattat ttatttggaa
     9061 ttatctctaa attgggtaaa aaatccatat ttgaggtcaa aatggataag tatttaatag
     9121 ataataggtc tattcaataa aaattgactg aatctataca agtaaatcaa ttggatttac
     9181 tcgatagaaa aattttaaat gaaattcaat ggctttttcc tcttactgat agacctttct
     9241 tagagattgc ccagcgtcat aatactacag aaattgacat tatgaataga atttcagcta
     9301 tgaaagaaaa tggattaata agacagataa acgcaatctt tgatacaaga agattaggtt
     9361 acaaaagtgc cctaatagca tttgcagtaa agccagagaa attagattat gtagcaaatg
     9421 aagttaacaa gcatcctggt gtaagtcata attatgaaag aaaccatgaa ttcaacatgt
     9481 ggtttacttt agccatacct cctcattcag aaatgaaagc tactttggac aaaatggcat
     9541 ctcttgatgg gataattaaa tatagattat tgcctacact aaaaatgtac aagatagggg
     9601 taaagttgga tatggtaaat gatgattcta taaatcctaa accaactgaa ggaattaagg
     9661 aattaaatcc agagaaaatt cacctaacag aacttgataa agattttatc agagaattac
     9721 aaaaggattt ggaaataata ccagaaccat ttgtgaaaag tgctgaaaaa ttatctatta
     9781 gcactgaaga actttttgat aaggcaagag aatttgaaaa agatgggata atgagacgat
     9841 atgctgctat attacgacac agagatgcag gatttactgc aaatggtatg atagtatgga
     9901 aagttcctga taatattatt gacaagatag gattcaaatt ggcaactttt tcccaagtga
     9961 gtcattgtta tagaagacca acatatccgg attgggaatt taatcttttt agtatgatac
    10021 atgcacgcag ttttgatagt gctgaaaaaa tcgcaaaaga aatgtctaac ataataagaa
    10081 tctataatta caagattctt tttagctcaa gagagtttaa aaaggaaagg gtaaaatatt
    10141 ttgagtgaat caaaaatttt tatttaattt atcagaatga attaaaatta tataacatat
    10201 taccaagata agcaatgtgt tgacatctga aatacagctt ccagattcta aatctattag
    10261 attactagaa atatctgatc tggcaattat gaatgaactt tcgtatatct tgaaagagag
    10321 aataatagaa tcatttagaa tcgattcatt tacaacttct gatccattta atcacaataa
    10381 gaattttcgt tattcgacta ttgttgataa agaaaatccg aataggataa ttgcgattat
    10441 gtgtattttc gaggattcag acaaatactc tttgaattgg aagaaaattg atataaaacg
    10501 cttgcaagaa atagtaatat ctccagatca agccaaagaa ttaaaaaacg aattaatgcc
    10561 aaaagatact aacaattttt atcaattaag ggtaaatggt aaagtaattg gatctatcat
    10621 gtttgctttc cagatatgtg gtctgcatga ttagaaatat gtatgaataa gcaaaaaata
    10681 ttcttggtca aatcacaata tcggttccct ttgtatatgc aatgtattat ttggtagtat
    10741 ttcgatgccc atgatgtcta aaataggtat agcttcgtcc ttttctcttg ctagaatact
    10801 tgcagcaatt ttcaatcgat aagaagaagt ccattgctgt cctattttgt attttcctcg
    10861 tatttctata ggaacaattt taataactgt cacctcttgt acagaacgca tttttgaatc
    10921 aagtctttga tactttcctt ctttttgata tttctccatc agagcattga gagctaaagc
    10981 tttttcttca taattttcaa ctatgaacga ttctcccttg attactatac tgatataaag
    11041 agtatctgcc tgagatgcat ctgtgggatg gaagtaatat gatggtagga aagctatatg
    11101 ctgatctact tcaaatccta cctttgaatt ccttttaata ttatctatct tttctccata
    11161 aggataagaa tgcatgtata tggaatgttg gtttaataaa gcagaatggt ttttatggtt
    11221 acgggtttgg atgtaaacaa aattcattgg tatgacctgt ggataaccat tgttatctac
    11281 cgttgcaagt ctaccaacta atcgatcatt aaggaaattt attatatttt ctatagattg
    11341 aatttctagt ttttttatta acttcaacag aaatcacaat tttataaata tcaaatatat
    11401 tatatttagg tatttgatat atagctaaca tttcaaattt tttcctcaaa tggatacata
    11461 ttatttaaca aattgaatag actacaataa ctttttttga tatgctaaat gtttttcctc
    11521 atattcgaaa tcaagaatct tttttatttt ttctgccctg gcaatcccaa atcctggaat
    11581 catagctaat tccgcagtcg aagcattaat tgcttttaat ggtgtcttga atttttcaag
    11641 taattttagg gcaagtttat ctcctattcc tggtaacgaa gataatatag ataattgctg
    11701 tagttgtaca tgatttgcct tcttaatttt ctttatcaga ggaccattta aaaataaatt
    11761 cgattgtaag atcttattcg ataatgaaat taaaaatttt gatgtatatt ttgcagatgg
    11821 tgaatgaata ataggtattc taaaaattat tgccactgtt gctagggcat cataaatttg
    11881 cgtaattttg tttaaagcga ttttttcttt ttgatggtaa tcaatatcat tttcaatatc
    11941 agtttttaat tcaagtatat ttccctctac tattaataga ggttttgaat aaaattgcaa
    12001 cagatcagaa cattgaacaa aaagtctccc atcataaata gaattaacta gatcccgtat
    12061 agtctttctt tcgatagcaa cttcagaaga tacaatataa tcccctacca ctaatcgtgc
    12121 aaaatctaca tgtacaccat tattgattaa gaattttgga accttgctgt ttctttctct
    12181 ttcatctact acaatccgaa aagacatagt tagttatgca cgaaacttat tttgtataac
    12241 tcagtgttga tatatcatga tatctgaaat tattgttgct gctgctggtt agatgatgct
    12301 cctttaatca tttcgttaat tttattttca acttctttta gattttcctt tactcttgat
    12361 tcttgttttc ctaggaccat aactcgagta tttgccaatt cttttttttc agatagttct
    12421 ttttcgacac tatctttttc tgtttttact aataaaggcc ctgcggcttt ataaatagaa
    12481 tcagaaggtt tggttttatt caattcctcc aatgctctat ccgtttcaac aatttctaac
    12541 tcaatttgtt gtttttgcat cattattgct tgtagatttt gttgaagttg ttgtaatcga
    12601 gatatttgtt ctttaagcca aggaggtaat tcattttctt gactcaactt gataattaat
    12661 aatgatattt aatataaatt tattttgtta gatatcaaat gattcaatca agcaacaatt
    12721 cgcagttttg accaatctaa gataagaatt aattgttgat ctaaaacttg atacttcacg
    12781 ggcaattata tctattgaaa aaaagttttt atcttcgttg gaagttaatt taactgaagg
    12841 aatttccaaa atttttatgt ctggctctaa ggctataaat attgatttaa taaagtcctt
    12901 attttgttta tctggtaata atttgaaaga aatattgatt ttagctttga agcttttcaa
    12961 tatttatatc atatgcccca gaggctacct tcaaattaca ttttgggcaa taccaaattc
    13021 cagacgcgat tcgatcaaat cttaaggagc tacaggttgg acaacgtctt ttttgtttaa
    13081 gtgttttata aacagttccg tatctttttc tcactgtcgc accaaatttt acaccaagac
    13141 ccttaagtgc catttgactt tttacatttc ttttaaccat ttgttatttc acgagctcct
    13201 ttattttttt tcttatttcc tctcctttaa ttcttgctat ttcagccaca tattttattt
    13261 gatccaaggt aaaagaccca tttgaaccct tttgaatggc agtatattct ccattagaat
    13321 tagtagttat tgttattctg gattccatac atgattcttc ctccgcagta ggatctaaca
    13381 taatagtatt tcctattttt attgcagtta ttgatactgg taatgtcgta atcggagggt
    13441 cttgtttatt gcctgtattc acaacttgat cattttgtat ttcgaaaatt ggtaatttac
    13501 tactagctag ggcacatact acagcataag atgtagcatc aaatagatta ccatcagcgt
    13561 tgataacact acagtctaca aaaatggtat agacaatttt cccatggacc aaaactaatt
    13621 tttcaaggtc aaccatttca gattctctga ttcccctatc aaccacccta gcaagctcta
    13681 tggtatcttc atctggtgga cctggttcta cgaaaggaga agatgtgggt aaaacttcag
    13741 cggtaacaat tagagctccc ttatgttcta atccctcaaa tggttcaccg gtctcaacct
    13801 ttacacctgc aataacttca gaatttccta atcttacgag agcagatcca tttgcctttt
    13861 tgattacatc gagatctatt tcaagtgttc tgagatcatc taaatttctg ccgtcaagtc
    13921 tttttttatt gtttaataag tctaacattt gacgcttgcg gagatattca attattattg
    13981 gagacttctt tgataagctc attattcttt tacctcctca ctagtttctt cgtctatggg
    14041 gatatcatta ccaaaatatt tttccatcaa agcttttctt tgtatttcat aaaccatttt
    14101 acatccctgt actgcttttt ccaaacattc agtaaattgt gattgagtga gtactccatc
    14161 tagttgtagt agggatattt gttcaagatt gggtagataa gcaacaggca tatcagctga
    14221 gccttcttta tcttctacat cattgatatc gagaacgatt ttgtcgttta tttttccagc
    14281 tgcacaagct gctaccaaat cgcgcatgtt aatacctgca tcagccaagg caacagatgc
    14341 tgcagttatt ccagcacatc tagaaccacc atcagcttgt aatacttcaa caaatatgtc
    14401 tatagccgca cgaggataat cttctaatac aacagcaggt tctaaagctt ctctcataac
    14461 cttagatatt tcaatttctc tacgagatgg agctgggttt ttacgtgtat cagtcgaaaa
    14521 tggggacatg tgatacctgc atcttaatac acatttatct ggttgagcca tatgttttgg
    14581 atgaacttct cttggcccat acacagctac aattatttta tttttgccaa attcgatgaa
    14641 tgcagatccg tttgcatttt ttaagattcc aacagtaagt ttaatttcac gtaattcgtc
    14701 tattgaacga ccatctgtac gttttccatt ttcatctacc aaaattgttt gattcatgat
    14761 cttcaatcct ccaattagtt aagaggaatc tcctgaagag gtttttgtaa tttcattatt
    14821 agtatcgtta ttgttttcaa catcatttgt ttttgaattg ttttcgttat ggctattaat
    14881 gtatgcctcg ttattaccag aagaattatt ttcagactct acttgttgta attcatcctt
    14941 tacatttaac aaatctttta ccttttgagt aaggtttgat gtatgtgctt cttcttcaac
    15001 catttttata gctttaaatg cgagacttat tccttcgtca tttttgccac ttactactaa
    15061 aattccattt tgacctatca gtatctttgt ttgtgtagct tgttctattg tttgtatcat
    15121 tgatcctctt ttacctatca aacgtggaac acgtgtggag gatattttta aaaattcacc
    15181 atgagaaatt cttcctaaat ctcgttcttg aatagtcaac atagggtctc gcgttctatc
    15241 aaatgcgatt attctagttg taacgagatc tcctggagca aatctttttt tcatatcatc
    15301 tcttgccgga gaaaaatctc ttccaaatac atcttgagca ggtaaatgag ctgaaaaaca
    15361 tgaattaata tctacttccc atgataatga agaattatca attatttttc ctatgacaat
    15421 atcattaatt ctaggaatat atatccccga taatggaatt acctttattc catctttact
    15481 tgattctgct attcctattc gtgtagctat aatggaattt tcttttctaa ttacattcat
    15541 cagaggttta taatttcctt ctataataac atctcctgga ataacatact ttcgctttat
    15601 ttctaacata aattaggata acatctcctt gttaacaaaa attacaaaga aaagcatctc
    15661 atccatatct tgatataaat ttttatgatc ttttctcaag tccaatttcc tattttgata
    15721 aaagatattt attattgtta ttattgttcc tgaatttggg cagaaccttt agttaccgaa
    15781 ttcatccttt caacgaatgt tccttttatc ccagcattta tttcaacaat aacccttaaa
    15841 gaaccatctt gcaaccattt ttcatctttt aattgaccga tatttttcag aacgttataa
    15901 gaaggtgcgg aaaattgtgg tggaatagtt actagcaatt gcaggttttc tgattttaat
    15961 ggcaaaattt ttcgtaaaga ttcaataatt ttcttggttt gatcttcagg tttcttgaat
    16021 ggatctatta ttaatcttac ttcttccatt gcattttgta ttcgtagtgg aggatgagga
    16081 agatgtgttt ttggatcaac gaaatttcta ttgatatatt gaataatctg ttttttcttt
    16141 tcttcgacca ttcttctacg ttgatctgtt gttagattaa cttcaccttg ttctagtatt
    16201 tttttagcaa tttcaatcga gtctgtagtt ttgaaatttc taattagttt ttcgtcagct
    16261 attctagttc ctttatttgc atctgcataa atttcatcag aaatcagaat attagatata
    16321 tcgatttttt tcccaagttt ataatctaat gcggggtctg gttttactaa aatctcgaat
    16381 ttatcattat ctatagctaa acgaactata gtggatttat tatcagtcac aaagtaatag
    16441 aaatcctatt aagtatttat gcatgtagag acatataaca taataatact gattgctata
    16501 ataaaggaat aaaatatttg atattttaac gatatgattt ttgtttcttt cttcttgcac
    16561 caggacctcc aaatttctta gattctgtct gtcttggatc ccctgcgaga agatgtctat
    16621 caaattcatt tattttttta cggatatctt gtcgaatact ctttgataat gggtgatcct
    16681 ttggatctct gtcacccttt gcctcaccgg ctaaggctcg tgatattgca actgcggtag
    16741 cgaaggcctg tcccataaat cctccgccag ccacttttac attgatgtca actttattgc
    16801 gtaaatcacc aactatatta actggcgtta ggattagttc tctagatacc tctggttgta
    16861 aaacctctgc tggaatatta ttaactctga tttttccatt ccccttggaa atagttgcaa
    16921 ctgcccttga tgtttttctc tgtcctggat agagatcaac tgttgttgtt tttgtcattt
    16981 cttttattct cctttccatc ctatttgttt tgcaatgtct ccaattgtta tataatatga
    17041 ttctggttta gttattttag tatcatcaaa tatttttatt tcattcgaac gaaattctac
    17101 cggtattcct atatacactc ttaatcttct aaatgcagag attccgcttg attttttcct
    17161 tggtgtcatg ccccgtacca tttttgtcaa gattctatca ggtcgtcttg gatgataagg
    17221 cccatgaata ggatttgtta tagaacttac ttcaagacgt tttttataat cgtcaattgt
    17281 tttataacga tttccagata tcatggcctt ttcggaattg acaatagtaa ccctattgcc
    17341 ttgaagtaaa agttttgaaa cacgggaaca tacacgacca gctatacaag aagatacatc
    17401 aactactatt tggtttttag aattattttt gtttgcataa ctagaattac tattgatatc
    17461 ttttttagat ttatccaatg attcgaacac cttttccatc aggatattgt tcaacaagtt
    17521 cattgatagt aataacttct cccccgcaat caataatctt cttcattgct gcaaccgaaa
    17581 tagaaaaaca acttagaatt attttatgat tgataatacc agaacccaat actttgcctg
    17641 gaacgataac aatatcacct tccttagtaa tattgtccaa tttactaacg tttacctcag
    17701 aacgattaga cctagaactt tcaaactttt tttcaataga tttccaaatt gcactttcac
    17761 tttttttgta tgcatcacgc aaacttaatt tagtgttatc attcaatgta ttagtaaaca
    17821 tacttgtaac cttatcatgt tccattagaa taatccccaa ataaacctac ctagttccct
    17881 ttttggaaat ctagagattt tatcatcgta ctgaaattat ttaattttga atttattata
    17941 ttaatagcag cctttactgt ttcctctgct gttagagacc caatagtttc tattatcaaa
    18001 atcgattcat ttgtttcatt cccatccttt actattgcag cagtagtggg ctgccatttt
    18061 gcatgatctt tacctattcc tagtctagca tatgcttcaa attttaattt ctgtccagga
    18121 gcaagagtaa ttataggaat attcttgctc actggtttca catattcatc ttcggataca
    18181 agatctcctg aagtaacgag tttcgtcttt tcagaagact cggaatctaa aattagtaat
    18241 acacgacatt tagaacaacc taaagtatta ttacaaccac atttgtcagg taaaatgaat
    18301 ctgttcaatt ctgttcgtaa tggaataaga cctagacggt gagcaactgc ttcatcgtgc
    18361 ataacggagg aattttctaa aattactaca tcgtctattg ctaagatagg aacctcacta
    18421 attgagattc tacgaatggc atttaaatac tgtcttggaa tgttattaaa ttttaggatt
    18481 attttttgat ctgttttttc taaaatattt atagatgaag tcaatattaa gtgaagtttt
    18541 ttgtccaaag cactcttaaa aatctaccga ccaacaccga aaaagaaaaa catagctaat
    18601 gaaattacaa cctcgcattg tccattagga tataaggtat agcaaataca ttatacctaa
    18661 tcaatttgaa agtagtccaa tttgaatgat attatagaat ataagaaaat ctattatttc
    18721 aggtatcaat atttgttggt ggatgataat attctactaa tttcttagaa taacagtccc
    18781 cacataaata gcccaatacg ttccactgtt gcataggctt gtatttaaaa atattaattt
    18841 cattattaca aactgtacat tttgtggaat cagacatttt gtttattaat tatttgtagc
    18901 attataaata tgataataaa atgttttttt taataatgaa ataaacatgt atatgaaatc
    18961 aatatcaaaa tataatgtaa atttaagtta gatttcaaaa aaattaatta ggacctttct
    19021 ccatccatga ttagttagat aaatgggagt taatgaaaag ataatttttt tgggaattct
    19081 tggattgggt gctatagtgg gaattttaac atatacagta tttatgggac ttgagcctac
    19141 cccaggagat acacgttcta tttatagaaa agatttaccg cctgattctg ctcaagcaag
    19201 tgcgggagca gaaaaatcac aaataaatcc tgcgtcaatt aaagctgatg tgatattgac
    19261 aattttggaa ggagcagcaa ctcaaggtaa tcctgattat gatccaaaag aaatgtctgt
    19321 gaagaagggc gatgttatta aggtagataa taaggataca gtacctcata cagttactaa
    19381 tggtgaaggt ccaaatgatt ctaattctgg aaaaatattc gacactggta ttactaatgc
    19441 cggagaagct tcgataatag atacacaaaa tattgatcct ggtgactatg cttattattg
    19501 tacagttcat ccatatatga caggaaactt gaagctacaa tagaaattta gagtcaattt
    19561 tatttttttg atcaagcagt agagtcagaa ttttctttca tgaggatatc cttatattat
    19621 gtaaataaga atactattcg tttatggctt ttttagagat caaggattta catgctagta
    19681 ttgaaggaaa agaaattctt actggtttga atttaaagat agagaagaat gaagttcatg
    19741 ccattatggg tcctaatgga tcgggtaaaa gtacatttgc aaacgtactt ttgggtcatc
    19801 ccaaatattc tgttaattca ggtgacattc aggtaaaagg aaagagtatt ctagagttat
    19861 ctactgatga gagagctaaa caaggattat ttcttggttt tcaatatccc atagaaatct
    19921 ctggtgtagg atatagccat tttttgagaa atgcttataa tactttaaat aaatcattaa
    19981 tgcaggatca aaagaatcga gaagtttttc tcactgtaaa ggaatttcac gaatatataa
    20041 aaagaaattt ggatgatgtt ggattagatc cttcatttct aagcagatat ctgaatgagg
    20101 gtttttctgg aggagaaaag aagagatctg aagtaatgca gatgctcgta ctaaaaccaa
    20161 atattgctat attggatgaa ccagattcag gtctagatat tgatgcagta aaatcagttg
    20221 ctgaagcgat taataaatta attgacacag gtgcaggaat agtagtaata actcactatg
    20281 ccagaatctt aagatatctt tcaaaactcg ataaagttca tgttatggca aaaggaaaaa
    20341 tcattaaatc tggaggtaaa gaattatctg aagaattaga gagcaaggga tatggatggt
    20401 taggtctaga tgagtcctag atcagttcga ttatcttatc aaaacaatag aactgtctat
    20461 tgaaaacacc acgaataatc tctctaatga tcataaattg attactaata ataggactaa
    20521 tgtataagaa aagatgtgta ataatgaata gtgaaaaacc tgtattcctg aatttttcgt
    20581 ttttcaaggt tgatccaaaa tggcgatggc taaatgaaat aggaaaggaa gaagccatta
    20641 aagaattcgc tgatttacta gaagtagcta atacaaaaat gaaggttata ccatattcta
    20701 ctgttggact tagagatgat gcagatttta tgttatggat gatttcggag tcagtagaaa
    20761 aaatgcaagt atttacatca aagatttatt tgacggtatt aggaaaatac gtggagcctt
    20821 ctcaaattta tttgtcttgt tcaagaagat ccgtatattc aaatcaagta aaacctggtt
    20881 ttacagatga cgtgaatccg ttacgatata acatagtata tccttttata aaatctagag
    20941 aatggtatct tctgccgttt gaaaaaagaa agaaaatgat ggatgaacat atagaggttg
    21001 gaagaaaatt tcctaatatt agattaaata catcatattc ttttggtctt gacgatcaag
    21061 attttatgtt agctttcgaa accgatgatc ttaacagttt tcaggacttg atcattcaat
    21121 tacgggaaac tgaagttagc agatatgtga ttaaagatac tcctatgata gtttgtgtgt
    21181 acaaaaagat tgatcaagtc attaagagtt tgggatgaaa agaatgatag cattaaaaga
    21241 atgggcgatt gtatgtaaag ctttagaaga tggaaaacaa attttgttac ttcgtaaagg
    21301 aggaattatg gaatttagaa gaggttttga gatcaaacat aatgaatttt ttctttatcc
    21361 cacatatgaa catcagtcta agaattcgat caaagatgaa tatataccat atttagaaag
    21421 tttgttatat gacagacacg ataatgaaaa aaaatatgat tctaacaaaa atagcataaa
    21481 tttatttgct caagtatatg aaattattga gatcacagat agagcaattt taccaaaatt
    21541 acaaaattat catatatgga ataacgaata tgttactatg cgtataaatt ataatcctac
    21601 taagccactt aatatattat tattaagaat atttaaaatt aaagaacctt tacttgtaga
    21661 catcaaagac ga
//
LOCUS       DATIAS010000597         2714 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1879675, whole genome shotgun sequence.
ACCESSION   DATIAS010000597 DATIAS010000000
VERSION     DATIAS010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1879675"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(248..682)
                     /gene="nikR"
                     /locus_tag="VLA74_12170"
     CDS             complement(248..682)
                     /gene="nikR"
                     /locus_tag="VLA74_12170"
                     /inference="COORDINATES: protein motif:HMM:NF002815.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010045 - response to nickel cation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HSF51509.1"
                     /translation="MNKNEVKKKEQVARISISLSPALLDQFDKSMNNAGFSDRSKAIQ
                     KALYEFINNNEWEQKEVQEGAGALVVLYDNHLFGNDRESIKSQHEYNDIIVTTTHLHL
                     DHDNCLETIILRGKIRRMKSFMKVISENRGIKSIKMHYVGIK"
     gene            1509..2246
                     /locus_tag="VLA74_12175"
     CDS             1509..2246
                     /locus_tag="VLA74_12175"
                     /inference="COORDINATES: protein motif:HMM:NF015226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015204 - urea transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071918 - urea transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea transporter"
                     /protein_id="HSF51510.1"
                     /translation="MFVQDGLSKSWAIPGFTSSFIFTTWTIMYATKRFGHDIWPEPVS
                     AAHEELIKDSGNPVQVQEENFKWTAGEFIKSTLKGVSQVTFVENWKTGIFWVVGLTLA
                     FELAPFITGQDRPWWTNGYTAQWNEFSPLYLGGLMAFVGSAVGAGMAILTKLPTGEIR
                     AGLHGFNQVLVMIALTSFLPLTAQSFLIALLATVSCGFVMPALQRFFGMWGLPALTGP
                     FVFTAWVFLLGIAGFSNIPAGIGWARP"
     gene            2290..>2714
                     /locus_tag="VLA74_12180"
     CDS             2290..>2714
                     /locus_tag="VLA74_12180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51511.1"
                     /translation="MNIQEFNEFLKLTSKGRENSDIQKIKMFIDWCNKNNHEEILLRL
                     SSEKDAGLGDNRIIDFTTKRIIITKKSFMKKFLDVGYVAGMGPFPYIILSEKKYTSKI
                     KDSAKLDVRKIMNKSDFEYSLDYDLVDEVIASQGSSSIV"
BASE COUNT          855 a          446 c          461 g          952 t
ORIGIN      
        1 agttggaaaa aaaaaaaatg atcgatatca aatgaaaaaa ggcaattcca atatctgatg
       61 atctattcat aaaaaattta attattctaa gtattaaaaa tttactaaat agtaatactt
      121 tattcatatt aaaccgattt agagaacaat taaaatacaa cgatgttatt cattatacta
      181 ataaatttat gataagccgt taccccttca tctatttcga atttatccat atagattaat
      241 aatgttttta tttaatgcca acataatgca tctttatact ttttatacct ctgttctcag
      301 agataacttt cataaaactt ttcattcttc ttatttttcc tcttagaatg atggtttcaa
      361 gacaattatc gtgatccaag tgtaaatgcg tagtagttac tattatatcg ttatattcat
      421 gctgactctt tatcgattct ctatcattac cgaagagatg attatcgtat agaactacta
      481 atgcacctgc gccttcttga acttcttttt gttcccattc attattatta ataaattcat
      541 aaagtgcttt ttgaattgct tttgatctat ctgaaaaccc tgcattattc atggatttat
      601 caaattgatc aagtaaagca ggagataatg aaatgctaat tctagcaacc tgctctttct
      661 ttttaacttc atttttgttc aagttcttac gcaattttat aatagatcgt ttttttttat
      721 tcttaaacct atctttacat taaataacat tattcttgtc aactgggatc gagataaact
      781 ttaagtttaa aaatttattt tgcatggtga aaatctatct tgtctttggg ttatctttat
      841 gtattaaaga ggttatatat tgaagaatga caacatattt tttataatat ccttaaatct
      901 tccatgcaac tatgtaagcc cataactaca aattctaata aattttttta ctatacacat
      961 ttatttattt cgctattttc ctgatctttt tatattttta tattgatgag gatattcagt
     1021 aatcataaat actcaaaatc aattataata tgatctaaaa atttttactt tattaataaa
     1081 caaaattaaa ttacaaatta ataaagaata ccttgtgaaa atctacctac atgggagtag
     1141 cagattttgt gtccggtaat ccgggattgg acttctttta tattctgttt aatggaattt
     1201 cagaagttcc tctcttcagt tccccgatca ctggcatcct gatactaatt ggagtcttta
     1261 tcgcgtcaag aaatgctgga ataatgatgg taatttccgg tctaataggt gcaggaatgg
     1321 ctatattgct aggagctcca tacggccttg ttgcattcgg tcttttcggc tataactcta
     1381 tattgactgg tatggctttt tggtctggac ctttcgttaa atctaacaag gcaacattct
     1441 tcatatctat tttcggtgca gctgttacag cagtagtttg gatggcattt ggtcatttga
     1501 tgggagacat gtttgttcag gatggtttat ctaaatcttg ggcgattcct ggatttacct
     1561 catcattcat ctttacaact tggacaataa tgtacgccac gaaaagattc ggacatgata
     1621 tctggccgga acctgtatcc gcggcacacg aagagttgat aaaagacagt ggaaaccctg
     1681 ttcaggtaca ggaagagaat ttcaaatgga ccgctggaga attcataaaa tcaacgttaa
     1741 aaggtgtttc ccaggttacc tttgtagaaa actggaagac tggaatcttt tgggtggtcg
     1801 gacttacgtt agcgtttgaa ttggccccgt ttataactgg ccaagacaga ccttggtgga
     1861 caaatggtta cacagcacaa tggaatgaat tttctccgct ttatttgggt ggtttgatgg
     1921 catttgttgg gtctgcagtt ggagctggca tggcaatatt gaccaaattg ccaacaggtg
     1981 agataagagc aggtctacat gggttcaacc aggtattggt aatgattgct ctcaccagtt
     2041 ttctgcctct taccgcacaa tctttcttaa ttgcattact tgcgacagta tcatgcggtt
     2101 ttgtgatgcc tgcgctccaa cgattctttg gaatgtgggg attgccggct ttaacaggtc
     2161 cgttcgtttt caccgcatgg gtgttcttac taggaatagc tggcttctct aatatacctg
     2221 ctggtatagg ttgggcacgt ccatagatcc gaaaaattcc ctttattttt tattttttaa
     2281 agtgaaaaaa tgaacataca ggaatttaac gaatttttga aacttacaag caaaggaaga
     2341 gagaattccg atatccaaaa aatcaagatg tttatagatt ggtgcaataa aaacaaccac
     2401 gaagaaatac ttctaagact tagttccgaa aaagatgcag gtttaggaga taaccgcata
     2461 atagacttca caacaaaacg aattattatt accaaaaaaa gttttatgaa aaaatttctt
     2521 gatgttggtt atgtagctgg gatgggtcca tttccataca taatattatc cgaaaaaaaa
     2581 tacacatcaa aaataaagga ttccgcaaaa ctagacgtca gaaaaattat gaacaaatca
     2641 gattttgaat attccttaga ttatgatttg gtagatgaag ttattgcaag ccaaggctct
     2701 agttctattg ttag
//
LOCUS       DATIAS010000598         3458 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1470516, whole genome shotgun sequence.
ACCESSION   DATIAS010000598 DATIAS010000000
VERSION     DATIAS010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3458
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470516"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VLA74_12185"
     CDS             complement(<1..250)
                     /locus_tag="VLA74_12185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51512.1"
                     /translation="MIRLSSTIKSRFVIDVIIAIGFLISGIFLSPYISEWYDENYGKT
                     LERLSGLLQSEKIQEFNDLRKQINVKIQFDEIDLSGKDL"
     gene            complement(418..1623)
                     /locus_tag="VLA74_12190"
     CDS             complement(418..1623)
                     /locus_tag="VLA74_12190"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HSF51513.1"
                     /translation="MTSAWEEIDEWGPEKVLQVYDPDTGMKGVLVIDNTSKGPGKGGI
                     RFAPSVTPLEIFRLARTMTWKCAAAGLPFGGAKGGIIADPNMVDRVSWMKSFAKMIRP
                     YCPSQYIAATDVGTTELDMAVFAHEIGDMRACTGKPSELGGIPHELGTTGYGVSVALQ
                     TALDILKDLKIMQVLNKSQIRVVIQGFGNVGSFAARFLDQNGIKVVGVSDVSGFIYNK
                     DENGLNIPKLMKDMKGRAKLSDLQDYGYDIRDKDEIFEIDLDIFIPAAMGSVINNKTA
                     PKLLGNGVKMVVEAANIPTTDDACRYLHENKIWIIPDFLANAGGVIGSFVEYQGRTEK
                     EAFDLIEYKITKNIKEVLTEAIMKEENPRKIATELSKQIVYRAMLLRKGAISVAREAY
                     DRKDKISIS"
     gene            2586..2999
                     /locus_tag="VLA74_12195"
     CDS             2586..2999
                     /locus_tag="VLA74_12195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51514.1"
                     /translation="MDSKDLVNLVVPLRLACLTNSGWPIIVPLWFKFLNDQFYCATQE
                     NAKLISYLKKDNRCAFEISSEIPPYRGIRGQGKAIIKKELGIEILQTVIEKYVQKKDT
                     DLTTYLLKSKEKEVAIEITPIKIFYWDYTNRMKIS"
     gene            complement(3146..>3458)
                     /locus_tag="VLA74_12200"
     CDS             complement(3146..>3458)
                     /locus_tag="VLA74_12200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51515.1"
                     /translation="TAFEKKMNKIESSTIIKYEDSFINKDKNLILIKTIAIENQQAQT
                     FYIIVMKKEQQITIRLDPLTDPKKTTAVKRSLGLIAKELLNKNKDLKLTKTNLSEFIV
                     Q"
BASE COUNT         1177 a          539 c          417 g         1325 t
ORIGIN      
        1 taagatcttt tccggagaga tctatttcat caaactggat cttgacatta atttgctttc
       61 ttaaatcgtt aaactcttgt attttttcac tttgtaatag tccagacaat ctctctagag
      121 ttttcccata attttcatca taccactctg aaatatatgg agacaaaaaa atacctgata
      181 ttaggaaacc aatagctatt ataacatcta tgacaaaacg acttttgata gtagatgata
      241 gacgaatcaa aatattgttt tgcttttcat atccatagtg atatgtattt ttcgagtttt
      301 ttgagtaata gtacgtgata tagaatattg atcaaaacat tgatgttcta ttttatgtcc
      361 atatcaataa ttgttcaaaa ctaaaatgtc ttattgtagt gtgcatcaaa ttcaatttta
      421 tgatattgaa attttatcct ttctatcata agcctcacgg gctacgctta ttgcaccttt
      481 tctcagtaac atggctctgt atactatttg tttagatagt tcagtagcta ttttccttgg
      541 attctcttct ttcattattg cttctgttag tacttcttta atattcttgg ttattttgta
      601 ttcaataaga tcaaatgctt ccttttctgt tcttccctga tattcaacaa aagatccaat
      661 aacaccacca gcattagcta agaaatcagg aataatccag attttattct catgtaaata
      721 tctgcaagca tcgtctgtag tagggatatt cgctgcttct acaaccattt ttacaccatt
      781 tccaagtaat tttggtgcag ttttgttatt tatgacacta cccatagctg caggaataaa
      841 aatatccaaa tcaatttcaa agatttcatc cttatctctt atatcatagc cataatcttg
      901 tagatctgac agttttgctc ttcctttcat atctttcatt agtttgggaa tgtttaaccc
      961 attttcatct ttattataaa taaaccctga tacatcactt acacctacca ccttgattcc
     1021 attttgatct aggaatcgag cagcaaatga tccaacattt ccaaatcctt gaatgacaac
     1081 tctaatttga ctcttattta gtacttgcat aattttcaag tcttttagta tatcgagtgc
     1141 tgtttgtaat gctacactca ctccatagcc tgtagttcca agttcatggg gaatacctcc
     1201 aagctcagat ggtttgccag tacaggctcg catatcacct atttcatgtg caaaaactgc
     1261 catatcaagt tctgttgtac ctacatctgt tgcagctatg tattgagaag gacaataggg
     1321 tctaatcatt tttgcaaatg atttcatcca tgatactcta tcaaccatat ttggatcagc
     1381 aataatacca ccctttgcac ccccaaaagg aagacctgct gcagcacatt tccatgtcat
     1441 agttctggca agtctaaaaa tttctaatgg tgtaacacta ggagcaaatc gtatacctcc
     1501 ttttcctgga ccttttgaag tattatcaat aactaaaaca cctttcatac cagtatcagg
     1561 atcataaacc tgcaaaacct tttcaggtcc ccattcatca atttcttccc atgcagatgt
     1621 caatttttat aatcataata tggatctcat tagattatac ttatcttttt tgtaaagata
     1681 tttttattca tcttttattt taaaagctct ttaactcatt attctttcaa gaattaaaat
     1741 ctacttcttg tacatttata aaaattgatt caatattctc aataacataa tttacagata
     1801 tatttttaac aaataaaaaa atctataaat ctttttgttc ttgaaaatcc tcatattgta
     1861 actgtcaatc tgactttcaa cataatacat atgtagtcaa tagtcatgat gatacaactt
     1921 ctataattcg ttttaataat tgttaaaatt ctcaaaatcc tttaatatca ttattttttt
     1981 actatataat tatcaaattt ttatttttga tgagaattaa ttttttatct tatatttgta
     2041 aatatgatgt tatcaatatt tgtaataact ttactaaaga ttagaataat atatattctt
     2101 tagctgttta attcttattg tttcttattc tttttataat ggacatagaa atttcgattg
     2161 catcagcatt ttaatcaact ataatatcag acatcattta attcatatga ctttgccaag
     2221 agcaaggcat gtaaaatatc atcacttttc catttctatc aagttcttgg catttaacat
     2281 aagaataaca gttttacaga agtttaatat aacataaata taatattatg tattattttt
     2341 ttggtatcat attaaattag atatattata ataatagtta ttctttatta aaatcaaaag
     2401 aaattattag atctatagct aattgtattc gaatagtaat ataataaaaa tataataatc
     2461 gttctcatga taataacaga taatcaaaaa ataaatgact attcttctgt taatagtgag
     2521 aaattctaaa tgaaatttaa ataatgcttt atcgataatt atataacaaa gtgatttgca
     2581 atactatgga ttcaaaggat ctagtaaatc ttgttgtgcc tttaagatta gcatgtttaa
     2641 ctaattcagg atggcctata attgttccat tatggttcaa atttttaaat gatcaatttt
     2701 actgtgctac ccaggaaaat gctaaattaa taagttattt aaagaaagat aatagatgtg
     2761 cttttgaaat ctcatctgaa attccacctt acagaggaat tagaggtcaa ggaaaagcta
     2821 taattaaaaa agaacttgga atagaaatat tacaaacagt tatagagaaa tatgtacaga
     2881 aaaaagacac agatttaaca acatatctgc ttaaaagcaa agaaaaagaa gtagcaatag
     2941 aaataactcc gatcaaaatt ttctattggg attatacaaa tagaatgaaa atatcataat
     3001 gatataagat tataacacag atacgagaca aataaaaaac tcttttaatt tttaaataat
     3061 aatgtatatt aaaaaaagaa acggaattca cattcttagc aatttgagat tacattcata
     3121 tatgtctata ttagaatata atttgttatt gaactataaa ctcggaaaga tttgtttttg
     3181 ttaatttcaa atccttattt ttattcaaaa gttcttttgc tatcaaacct aatgatcttt
     3241 ttacggcagt ggtttttttt ggatcagtta acggatctag cctaattgtt atttgttgtt
     3301 cttttttcat aactattata taaaatgttt gtgcttgttg attttctatt gcaatggttt
     3361 taatcaatat caaattctta tccttattaa taaaagagtc ttcatatttg ataattgtac
     3421 tgctttctat tttattcatt tttttctcaa atgctgta
//
LOCUS       DATIAS010000599         5736 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2016640, whole genome shotgun sequence.
ACCESSION   DATIAS010000599 DATIAS010000000
VERSION     DATIAS010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5736
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016640"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..1128
                     /locus_tag="VLA74_12205"
     CDS             196..1128
                     /locus_tag="VLA74_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51516.1"
                     /translation="MQIVESSPYKKLVYALESKDVKRQVYLLTIFLFLFLGISCSLFL
                     SNGEIFGELGTVPPPTFHKVLPTYVVDITTGSGISYKFQHFYPLNIAIPVGTTVAWFN
                     YDPESIHTVTSGAPGSPNSGKMFNSGIIPYSGSLQYTFDTPGRVAYHCEIHPWMIGSV
                     YVSDSFKEGNNIKLNSGSDMGLMDNSQYDWAFNTTKNDRILLDFQPTSINFGKTVPLT
                     YNITLHDDKKLKTIFSKTFVALGNDLQIELISSNLDDILVYGPDFSDPIIGAYHIRSN
                     NPDGEYSINAEITAVGSNLTQSEISDKFKGIIVS"
     gene            complement(1280..3550)
                     /locus_tag="VLA74_12210"
     CDS             complement(1280..3550)
                     /locus_tag="VLA74_12210"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSF51517.1"
                     /translation="MSNNKYIEYSNLSESENYIDHPLIKKKSIDHRLYQTNIVNSSRG
                     KNSMVILPTSLGKTIISALLSADVLYNFKTMRVLVMAPTRPLVLQHMFSFSSVLKILN
                     NQKIFVTGQIPPSTRKLIWDNKNIRLIFSTPEIIRNDLFESRLSLDDFGLVVFDEAHR
                     AVKDYAYTYIAKKYLEQSLNPVILAMTASPGSDRIRIDQICEHLSIEHIEYRNEEDSD
                     VKPYVNPIDLSWELIDLSCDYKNIVHLFREILKEKLRWLVYRGLIQKKNLEYIFKSDL
                     IELGKVLQRNLQFSVTEEKGQLYSALLNQSSALSLMYCIELIESQGPYSLQNFINRME
                     SSEGKAHSILLKDPRMDEIKKKLVNISDHPKIKYIIDLLDQNKFVSNIKDSNNTNLSL
                     DSNSKILIFTHYRDTATHIVDVLKQRKIRSCRFVGQSSKNNDVGMKQDEQSNVLDSFR
                     RGEFNILIATSIAEEGLDIPEVDLVIFYEPVASEIRHIQRKGRTGRRSKGKVIILASK
                     DTVDMRLLYASKRRMEKMRNIFNTKKTSLKPMKRNQISLTPLTEKELESLEELLEKEK
                     ANLGTEDYDFKLQNYKLLAKMKENKFDDKYLYNKQSRSDGTINSKNKSKNNKELIDKT
                     VRNIYELLVKEKINKKTQFDLRYLSDHFSIDYKILLDAIDQLQKEEIITVKNNYIIFN
                     KIPNSKEQKYMIYVEKILLGKASVMVNGRWHAVLNYYDYDGPRNILKKGSEFMARADL
                     YNNEGSFCIRIKEVIL"
     gene            complement(3709..5088)
                     /locus_tag="VLA74_12215"
     CDS             complement(3709..5088)
                     /locus_tag="VLA74_12215"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HSF51518.1"
                     /translation="MQKVFLQYDKGSIIISGLAQIPYTIFDPRTNQLRAQGFYYSNII
                     SFLQQSGIEYEDRVMDIIPTPSLTISDSNIKLSLRTYQKKAIENWVNADKKGCIILPT
                     GSGKTIIAIKIIELINSSAIIIVPTIDLMDQWIKVLSIYFKNLKIGNIGGGNSNISGI
                     TVSTYDSAFLKAHLIGNKFSLLIFDELHHLAAPGYRTIAEQFASRYRLGLTATYERED
                     NLHLEFPKLVGGIVFQSYVNDLTKEKHLASFVVERRFVKLLPEEKIEYNQNYELYQTL
                     LKKIGIKLRGQMGLQKLIMISGKNKDAREALLARNKALDIALNSQSKVEELRKILNEN
                     HGLKTIIFTQHNKLVYTISDKFLIPFITHKSSKQEREDTLNGFKDNRYNAIVTSKVLD
                     EGVDVPEAELGIIVSGTGSKREFIQRLGRLLRTKPDSNKRAKLIEVISSETQEINTSA
                     RRKQALKNI"
     gene            complement(5168..5431)
                     /locus_tag="VLA74_12220"
     CDS             complement(5168..5431)
                     /locus_tag="VLA74_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51519.1"
                     /translation="MIESERKCKRCAISKKRPSGFLRRNIPFILMMVAVWFFVSGLYP
                     FPYFYAVGMPVDEAIMKPVLIATAIFMIPFIFIMIAWRKRPPY"
BASE COUNT         1852 a          902 c          796 g         2186 t
ORIGIN      
        1 tataaagtaa tagaacttaa ctggcgcgag aatattcatc attattatca tactaaaaag
       61 actcatcata ataaatagaa tcaaatcata tcagtttatc aaaaatagtt cgagcttctt
      121 tacccaccga acccgtggat aaatccacac gaaaaacctt aaattgcact aaaagataat
      181 aatgatcaat aatagatgca gatagtagaa tcatctccat ataaaaaact tgtgtatgca
      241 ctcgaatcaa aggatgtaaa aagacaagtt tatttattga caatattttt atttctattt
      301 ttaggaatca gttgtagctt attcttatca aatggagaga tattcgggga acttggaacg
      361 gttccacctc caaccttcca caaggtactg cctacctatg tggtggatat aaccacaggt
      421 tcgggtatta gttacaaatt tcaacatttt tatcccctaa atatcgccat accagtgggg
      481 actactgtag catggtttaa ttacgatcca gaatcaatac atactgtaac tagcggggcg
      541 ccaggatcac cgaattcagg aaaaatgttc aattcaggta ttatacctta ttctggttca
      601 ttgcaatata cttttgatac gccgggaaga gttgcatatc attgtgagat tcatccttgg
      661 atgataggtt ctgtttatgt aagtgattct tttaaggaag gtaataacat aaaattgaat
      721 tctggatctg acatgggttt aatggataat tctcaatacg attgggcttt taatactacc
      781 aaaaatgata gaattttact agatttccaa ccaacttcca ttaactttgg aaaaactgtg
      841 ccgttaactt acaatattac tttgcatgat gacaagaagt taaaaacaat tttttcaaag
      901 acctttgttg ccctaggaaa cgatcttcag atcgaactta tttcaagcaa tcttgatgat
      961 atcttggtat atggtccaga ttttagcgat cctattatag gagcatatca tattagaagt
     1021 aataatccag atggagaata ttcaataaat gctgaaatca cggcagttgg ttctaacttg
     1081 acacaaagtg aaatatctga taaatttaaa ggcattattg tttcctagaa atatattatt
     1141 tcattagtag aagcattaaa attcaaaatt ttttgatact cataagatct atatgtcgtt
     1201 tatcaataat gaaatcttca ataaataata taaaaatcat tttataatat ttactaagga
     1261 cattataata taccaagatc tacagaatta cttcttttat tctaatacaa aatgatcctt
     1321 cattattata aagatctgct cttgccataa attcggaacc ttttttcaaa atattacgtg
     1381 gcccatcata atcataataa tttaatacag catgccatct tccgtttacc atgacagatg
     1441 ctttccctag taatattttt tcaacataga tcatatattt ttgttcttta gaatttggta
     1501 ttttattaaa aataatataa ttatttttta ctgttattat ttcctctttc tggagttgat
     1561 caattgcgtc taacaatatc ttatagtcta tagaaaaatg atcggacaaa tatcttagat
     1621 caaattgggt ttttttattt attttctctt ttaccaacaa ttcataaata tttctaactg
     1681 ttttatctat caattcttta ttatttttag atttattttt tgaattaata gttccatcag
     1741 atcttgattg tttattgtat aaatatttgt catcaaattt attttctttc atttttgcta
     1801 ataacttgta attttgtaat ttgaaatcat agtcttccgt acctaaatta gctttttctt
     1861 tttcaagtaa ttcttcaagt gattctaatt ctttttcagt taatggagtt aaggatattt
     1921 gatttcgttt cattggtttt agtgaggttt tttttgtatt gaatatattt ctcatcttct
     1981 ccatgcgtct tttacttgca tatagcaaac gcatatcgac agtatctttt gaagcaagta
     2041 ttataacctt accttttgac ctacgaccag ttcttccttt tctttgtata tgtcttattt
     2101 cacttgcaac aggttcataa aaaataacta aatccacttc aggaatatct agtccctctt
     2161 ctgcaattga tgtagctatc aatatattaa attctcctct tctaaatgaa tctaatacat
     2221 tggattgctc atcctgtttc atgcctacat cattattttt gctcgattgt ccaacaaatc
     2281 tgcaggatct tatttttctt tgttttaata catcaacaat atgggtagct gtatctctat
     2341 agtgagtaaa aattaaaatt ttagaattcg aatctaatga aagatttgta ttatttgaat
     2401 cctttatatt ggaaacgaat ttattttgat ctaataaatc tataatatat ttaatttttg
     2461 gatggtctga aatatttaca agtttctttt ttatttcatc cattcttggg tcttttaaga
     2521 gtatggaatg tgcttttcct tcactagatt ccattctatt tataaaattt tgaagagaat
     2581 acggaccttg actctcgatt aattctatgc agtacattaa agaaagagca gaagactggt
     2641 ttaacaaagc agagtataac tgaccttttt cttcagttac cgaaaattgt agatttcgtt
     2701 ggagaacttt tccaagttct attaaatcac ttttaaatat atactcaaga tttttttttt
     2761 gaattaatcc acgataaacc aaccatctta atttttcttt taatatttcg cgaaatagat
     2821 gtacaatatt tttataatcg catgatagat ctattaattc ccaactcaaa tcgattggat
     2881 tgacatatgg ttttacatca gaatcctctt catttcgata ctcgatatgt tcaatactaa
     2941 gatgttcaca gatttggtcg attctgatac gatctgatcc agggcttgca gtcatagcta
     3001 gaatgactgg atttagtgac tgttctagat atttttttgc aatatatgta tatgcatagt
     3061 ctttcactgc tctatgagct tcatcgaaaa ccaccaatcc aaaatcatct agagatagac
     3121 ggctttcaaa aagatcattt ctgattatct caggagttga gaatattaat ctaatatttt
     3181 tattatccca tatcaacttt cttgtagatg gtggaatttg accggtaaca aagatttttt
     3241 gattgtttaa tattttaagt actgaagaaa acgagaacat atgctgtaat accaatggtc
     3301 tcgttggagc catgactaga accctcatag ttttaaaatt ataaaggaca tctgcagata
     3361 acagagctga aattattgtt tttcctaagg aagttggaag aatgaccatt gaattttttc
     3421 ctcgtgacga attaacaata ttggtttgat acaatcgatg atcaattgat ttttttttga
     3481 ttagaggatg atctatataa ttttctgatt ccgacaggtt actatactct atgtatttat
     3541 tatttgacat attataataa ttatgtaaaa tctaacatat taacgagtta atttaattct
     3601 ttttgatgtg atttgagtta atatgtaaga taaagatata atttaaatat tttatttgat
     3661 ttttagtttt ttaaaaataa ttcatctatc aattatagtt acactttatc aaatattttt
     3721 aagagcttgc tttctcctag cacttgtgtt aatttcctgt gtttcagaag aaattacttc
     3781 tattaatttc gctcttttat ttgaatctgg tttagttctc aacagacgcc ctaaacgttg
     3841 aatgaactcc cttttactac cagtaccact aactattata cccaattccg cttctggaac
     3901 atctacacct tcatccaata ctttggatgt tactatagca ttatacctat tgtctttaaa
     3961 accatttaag gtatcttccc tttcctgttt acttgattta tgagttataa atggaattag
     4021 aaatttgtca gagattgtat ataccaattt attatgttgt gtaaatatta tcgtttttaa
     4081 tccatggttt tcattaagga tctttcttaa ttcttccacc ttggactgac tgtttagagc
     4141 aatatctaaa gctttattcc tagcaagtaa ggcttctctt gcatctttgt tttttcctga
     4201 aatcattatt aacttttgca gtcccatttg accacgtaat ttaatcccaa ttttttttaa
     4261 tagagtttga tataactcgt aattttgatt atattctatt ttttcttctg gtaataactt
     4321 tacaaatctc cgttctacaa caaaagatgc caagtgtttt tctttagtta aatcattaac
     4381 atatgactga aacactatac ctccaactaa ctttggaaat tctagatgga gattatcttc
     4441 tctttcataa gtagcagtta gacctaatct atatcgagat gcaaattgct ctgcaatagt
     4501 cctatatcct ggtgcagcta gatgatgcaa ttcatcgaaa ataagtagag aaaatttgtt
     4561 tcctattaga tgcgctttaa gaaatgcaga atcgtatgta gaaactgtta taccactaat
     4621 atttgagttt cctcctccta tatttcctat ttttagattt ttgaaatata ttgaaagaac
     4681 cttaatccac tgatccatta gatctattgt tggtacaatg ataatagctg aagagtttat
     4741 taattcaatt atcttgatag ctataattgt ttttcccgac ccagtaggta aaattataca
     4801 tccttttttg tctgcgttta cccaattttc tatggctttt ttttgatatg ttcttaaaga
     4861 tagtttaata tttgaatcag atatagtaag agatggtgtt ggaattatat ccataacacg
     4921 atcttcatat tcaatgccac tttgctgtaa aaacgagata atatttgaat agtaaaatcc
     4981 ttgtgctctt aattgattag ttctagggtc aaatattgta tatggaattt gagctagtcc
     5041 agatataatg attgaacctt tatcatattg taaaaatact ttttgcaaga ttatcagata
     5101 atttattttc ttatttattt aatctttaaa aactgtagga tatattacaa tgtattaaga
     5161 agtgctctta atatggcggt ctttttctcc atgcaatcat tataaatatg aaaggaatca
     5221 taaaaatggc cgtagctatg agaaccggtt tcattattgc ctcatcaact ggcattccta
     5281 cagcataaaa atacggaaaa ggatacaaac ctgaaacaaa aaaccatacc gcaaccatca
     5341 tcaatatgaa tggaatattt cttcttagaa agccggaagg tcgtttttta gagattgcgc
     5401 atcttttaca ttttctttcc gattcgatca aacaagatga acatgtattt tgattacagt
     5461 atgcacatat aatattacca aattttgatc cacagatata acattggttc aataaccctg
     5521 ttagaaagat cgcatgcaca tatttaatat ttattcaggt atctttgtac tgaataattt
     5581 tttagattat caatataata actttaacac tagcaacaac aaatacaaaa aaaaataaaa
     5641 aaagagtgga ttgaagtttt gattttctat ggaatagatc tgctgtacag ttttccttcc
     5701 aatgctagct tgtacatctc tgctacatac gggttc
//
LOCUS       DATIAS010000600         3924 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1062589, whole genome shotgun sequence.
ACCESSION   DATIAS010000600 DATIAS010000000
VERSION     DATIAS010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3924
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1062589"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..1257)
                     /locus_tag="VLA74_12225"
     CDS             complement(130..1257)
                     /locus_tag="VLA74_12225"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51520.1"
                     /translation="MSLMLFIFYNFDNLEFNSKSFVNVYALDDDGDGTSNDIDFNYVF
                     DPNEYLEEDTTILTYQNNNNINQIKQSTESEINDNKEITPPYDNLNINEKINDENFTQ
                     SFDTKDRDNNTNTNFNIVAVGDWDCTGETEDTVDNIVEQDPEVVLALGDFSYSGDADC
                     WFELIEPIADKTKIVMGNHEDEDDYMDFFGLKEEYYSFNYRNIHFLALSTETDYDDDS
                     EQYEFAIQDLEKYSKDPFIDWIIVFYHRHIYGSGSLEADTDFREIYHPLFDKYKVDLA
                     LQGHLHVYERTYPIIFNEEDDYEPIVQDYNPSIYKNPKAPIFVTVGTGGAHDMTLSSS
                     DDFAGEGIDGEFGILDIALESDQKTLTGTFIENGKKKKGYG"
     gene            1492..3123
                     /locus_tag="VLA74_12230"
     CDS             1492..3123
                     /locus_tag="VLA74_12230"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF51521.1"
                     /translation="MFGKKNLYSLFAIYIYAYIYAQKQKQQQGKQHLSEENITLFDPT
                     LKIELVTSGLDFPTTMAFLGPDDFLILEKNTGNVIRVINGTLLEKPLLHVDASIKDER
                     GLLGIAVSKKKDFNDNIFFIENKKITHNVFLYYIKCNDKKNLNCENRIYKYDLDNQKN
                     VLVNPKLLVGVPSFPDPSHIGGIIDIGPDENLYVTVGNFQDTIPSVVYKTPTQNYENR
                     HPIDGRAGILRLTQDGYPVLYPNGSGVIGDTYPLNAYYAYGMRNSFGIDFDPVTGKLW
                     DTGNGPQFGDEINLVEPGFNSGADKIYGIWESNELGDRSKNKKGEYVTVTEDNPADLV
                     YLDGKGHYNPPEFIWGKTVAPTALSFLDSDKLGSNYKDDIFVGSADGGRLFHFDLNEN
                     RDGLILKGNLTDKIALNHTEYGDILFAEGFSIVTDVKQGPDGYLYVVSGLKQSKTAKF
                     GAVFRFVPTENSNNNNSSNTKHDSIILHTQKEEKSGNVLNESSTHINSMTKSENIPKK
                     IDTNILSAIAPKLANTTKIIDTKAWDKLFVQQKVE"
     gene            complement(3552..3701)
                     /locus_tag="VLA74_12235"
     CDS             complement(3552..3701)
                     /locus_tag="VLA74_12235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51522.1"
                     /translation="MQNKERRVKRKSLFEFEQRYKDNIAYELQSKNDIECYDKVMKSY
                     PNYPG"
BASE COUNT         1424 a          544 c          551 g         1405 t
ORIGIN      
        1 tatttaaaat tgtatcattt tttataaaat ttcatataat taaataaaca attaatctaa
       61 ataaaaaata taataactaa ctaataacta aaactagcta ttccatttta ctcttttaca
      121 atcttgaatt catccataac cctttttttt ctttccattt tcaataaaag tacctgttaa
      181 tgtcttctga tcagattcta aagcaatatc tagtattcca aattctccat ctattccttc
      241 acctgcaaaa tcatctgagg aagataatgt catatcatga gctccaccag ttccaacagt
      301 tacaaaaatt ggagcttttg gatttttata gatacttgga ttataatctt gtactatggg
      361 ttcataatca tcttcctcgt taaaaataat tggatatgtt ctttcatata catggagatg
      421 accttgtaaa gccagatcaa ctttgtattt gtcaaaaaga ggatgataga tttctctaaa
      481 atcagtatcg gcttcaagag aaccagatcc atatatatgt ctatgataaa atacaataat
      541 ccaatctata aatggatctt tagaatattt ttcaagatct tggatagcaa attcatattg
      601 ttctgaatca tcgtcataat cggtttctgt agacaatgcc aaaaagtgta tatttctata
      661 attaaaagaa tagtattctt ctttcaagcc aaaaaaatcc atatagtcat cttcatcttc
      721 atggtttccc attacaattt tggttttatc tgctatcggt tctattaatt caaaccagca
      781 atccgcatct ccactatatg agaaatcacc aagagctaga actacttctg gatcttgctc
      841 tacaatatta tcaactgtat cctctgtttc tcctgtacaa tcccaatctc ctacagctac
      901 aatgttaaaa ttagtatttg tattgttatc tctatcttta gtatcaaatg attgagtaaa
      961 attttcatca tttatttttt catttatatt gagattgtca tacggcggtg ttatttcttt
     1021 attatcatta atttcacttt cagtagattg ttttatctga ttaatgttat tattattttg
     1081 ataggtaaga atagtagtat cctcttctaa atactcatta ggatcaaata cataattgaa
     1141 atcaatatcg ttacttgtac cgtcgccatc atcatcaagt gcgtaaacat ttacaaaaga
     1201 tttagagtta aattctaaat tatcgaaatt ataaaaaata aataacatta aactcattac
     1261 aaagataaaa ttaaaataat tataattatt gctatttata aatatcaaaa taatcacaat
     1321 atcttgaaaa aagaatataa taacattatg ccaaatattt tattggagaa agttatattc
     1381 taattttata actaatttgt atcaataaat gataattatt ttcttttaaa agtttctcac
     1441 aaattattta tttataatat gcatgacttt tagttgaaaa ttattctata gttgtttgga
     1501 aaaaaaaatc tatattctct ttttgcaatt tatatatatg cttatattta tgcacaaaaa
     1561 caaaaacaac aacaaggaaa acaacatctt agtgaagaaa atattacact ttttgatccc
     1621 actttaaaaa tagaattagt aacatctgga cttgattttc ctactaccat ggcattttta
     1681 ggtccagatg actttttaat tcttgaaaaa aatactggca atgtgataag agtaataaat
     1741 ggtacattac ttgaaaaacc acttttacat gtagatgcaa gtataaaaga tgaacgaggt
     1801 ttgctaggaa ttgctgttag caagaagaag gattttaacg ataacatttt ttttatagaa
     1861 aataaaaaaa taacgcataa tgtctttcta tactatatta aatgtaatga taagaaaaat
     1921 ctgaattgtg agaatcggat ttataaatat gacttggata atcaaaagaa tgtccttgta
     1981 aatccaaagt tattagtagg tgtaccttca tttcctgatc cttctcatat tgggggtata
     2041 atagatattg gacctgatga aaatctttat gttactgtag gaaacttcca agatactatt
     2101 ccatcagtgg tatacaaaac tcccactcaa aattatgaga atcgtcatcc tatagatggc
     2161 agagctggta ttttaagact tacccaggat ggttatccag ttttatatcc taacggtagt
     2221 ggagtaattg gagatacata tcctcttaac gcttattatg cttatggaat gagaaatagt
     2281 tttggaattg attttgatcc tgtgacagga aaattatggg atacaggaaa tggaccgcag
     2341 tttggggatg aaattaactt agtggaacct ggctttaaca gcggtgctga taagatatat
     2401 ggcatttggg aatctaatga attaggagat agatctaaga acaaaaaagg tgaatatgtg
     2461 actgtcacag aagataatcc tgctgatcta gtttatcttg atggaaaggg acattataac
     2521 cctccagaat tcatatgggg taaaacagta gctccaactg ccttgtcatt tcttgattca
     2581 gacaaattag gttctaacta taaagatgac atatttgttg gatctgcaga tggtggtcgt
     2641 ttatttcatt tcgatctaaa tgaaaataga gatgggttaa ttttaaaagg taatctaaca
     2701 gataaaatag cactaaatca tacagaatat ggtgatatat tatttgcaga aggttttagt
     2761 attgttacag atgtgaagca aggtcctgat ggatatctct acgttgtttc aggactaaag
     2821 cagtcaaaaa cagccaagtt tggagcagtt tttaggtttg tacctactga aaatagtaat
     2881 aacaacaaca gcagcaatac aaaacatgat agcataattc tacatacaca aaaggaggaa
     2941 aaaagtggta atgtattaaa tgagagcagt actcatatta attcaatgac aaagtcagaa
     3001 aatataccta aaaaaataga tacaaatata ctttcagcaa tagcaccaaa gttagcaaat
     3061 acaactaaga taatagatac aaaagcatgg gataaactct ttgtgcaaca gaaagtagaa
     3121 taggtaggca aaaggaaaga aaatatcttt gaaataatat agacgtagtg tttattttat
     3181 aatatataat aacaatataa aaggaattgc aataactgat tttttcatat tattttttcc
     3241 cttactctat atacgacgta tttgaataag agtattttaa tacaacaata gacaaatatt
     3301 tccgtaaata ttttcgaaaa aagttatttt ttccgttact aacaaaacat cgggaaactt
     3361 ttatagattt tttaatttat taattaattg gtctactatt actctagagg tgtacaacgt
     3421 aagcaagtta tatcataata aaataatgaa tatcatcgtc aatctattat tgatatttct
     3481 taatattgat ttcatttttg ttgaaacaaa aatttttagc atttgtttat actttacaat
     3541 ataagtataa attaacctgg atagtttgga tatgatttca taactttatc atagcattca
     3601 atatcatttt tactttgcaa ttcataggct atattatctt tatacctttg ttcaaattca
     3661 aaaagacttt ttcttttcac tcttctttct ttattttgca agattcatta ttaattctgg
     3721 tagacttaaa atgtacttgt cgtaaaagtt atagatctag tatttattgt taagtatatc
     3781 aataagggca tggcttttta tcaattttta aattaaaaac aattagagga gtttgtcgtt
     3841 gtgggaaata gattttgata tactttcatt tattgcgcta attaacttaa atattgatac
     3901 acgctttttg agaatgttga attt
//
LOCUS       DATIAS010000601         7205 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1471184, whole genome shotgun sequence.
ACCESSION   DATIAS010000601 DATIAS010000000
VERSION     DATIAS010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 7205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7205
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1471184"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VLA74_12240"
     CDS             complement(<1..953)
                     /locus_tag="VLA74_12240"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF51523.1"
                     /translation="MILSSWFFTFLSIAIIILIAIIPITSAASAYPLEENKILEKKGK
                     QNNNSDNIGVTITNNKTKEIEKLLDTAEEYYISGGHGEAIVYFDRALAVDANNTDAIT
                     GKGEVLLELEKYEEALTYFDRALAVDANNTDALNNKGVALSNLGEYEDAMEYYDKALA
                     IDGNDTSVLNNKAMAFYRLGQYYEAMEYYDKALAIDANHTYALNNKGLALSKLGQLQE
                     AIALYDKALEIEPNDTDALNNKGIALYNLGQIQEAIALYDKVLEIEPNATDALNNKGL
                     ALSDLGQLQEAIALYDKALEIEPNYTIALGNKGLALSKLGQL"
     gene            complement(1475..1648)
                     /locus_tag="VLA74_12245"
     CDS             complement(1475..1648)
                     /locus_tag="VLA74_12245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51524.1"
                     /translation="MDKVRIQRIKKRNEQERDPEYLYQRVKEDLSKLERVYKDQKYRD
                     VRTIFPRIYIINS"
     gene            2021..2224
                     /locus_tag="VLA74_12250"
     CDS             2021..2224
                     /locus_tag="VLA74_12250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51525.1"
                     /translation="MESQRTYLQINIEELLIINQSLRENDKVKEDVLAHLSDQLLVLS
                     ERIQINRSKNLMKMQKEQKYLKI"
     gene            2251..4680
                     /locus_tag="VLA74_12255"
     CDS             2251..4680
                     /locus_tag="VLA74_12255"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSF51526.1"
                     /translation="MNTPISINGVGGNVTVTIIDGSNNKTDIRIDDFENSFPQECGLT
                     FLYNDPYRKDSSNTSTHFSDWVKGFQFNIKSVYYEREYRREGLLNKIKTKLEQDQRLL
                     LLGESGTSKSIILMEILCDYLKLDYKILHNLDPVSIGNSSGEIKNIQYIENTILKLVE
                     AKKNVIVLVDDVHNKTISDIFSVMKRIRDYNEDIFKKITFLLSARQPDFEQAMTGGGI
                     FHAETKDRIDLLFDDPKREPIPYFSQEEVKGFIEKYREYWDSSLRNKSIDENAQAIFN
                     DTKGHPIMVRFSVLKNGLKNHVRQMYQDWLLTKDNSLNIERIKSVIACSLYHISSIPL
                     NDKTLSVDLGLEEPSYELDKTIIKIEGNVWTTIHPRWDLELFNYLFSLNVHIRKIQRA
                     FSFILNKILDINSGSGTWNQLLILDTVYSTIAAKKFVDIKFIQEMIKEDDIEKKIDHF
                     FKPEFFNIIGFAYNKLEYRNYAIVCCDKAIEINPQYVNAYINKGIALFVLVRNEEAIK
                     CYDKAIEIDPHVSMSYYLKGRILLAVGRYEEAIVCCDKAIEIDPYDTMSYYNKGNALS
                     ALGRYEEAIDYYDKAIAINSQDAEAYYYKGVILSILGRNEEAIVCCDKAIEINPQYAL
                     AYYYKGAALSDLGRYEEAIVCYDKTIEINPQDADAHLARGIALSTLGRKEEAIACFDK
                     TIEINPQDASAYYNKGIVLSVLGRYEEAIVCDDKSLTIDPNYSDALNGKAFALANLGK
                     NEEALPLIEKALESDSNNEYYLSTAAFIMYNLGKYDEAKNYYNKALDINPNLKDTLSE
                     SELKAFNSVME"
     gene            complement(4952..5170)
                     /locus_tag="VLA74_12260"
     CDS             complement(4952..5170)
                     /locus_tag="VLA74_12260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51527.1"
                     /translation="MLLLQQSLIIGVNILLQHYTMIKCRNCSYKFDPTKEGNRKKRKC
                     GMCYFGDSYSIRSKKEYDRNLLLMMIES"
     gene            5230..5373
                     /locus_tag="VLA74_12265"
     CDS             5230..5373
                     /locus_tag="VLA74_12265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51528.1"
                     /translation="MSKDEIQTSLRMSRELLKKLKQFALDHDISLATVVREACEEYLK
                     KHK"
     gene            5523..>7205
                     /locus_tag="VLA74_12270"
     CDS             5523..>7205
                     /locus_tag="VLA74_12270"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSF51529.1"
                     /translation="MEYYLGCSGWSYDRWKGHFYPVDLDNRYWLSYYSQIFDFVEIDS
                     TFYRIPSSFMVSNWNKRTPDNFRFAVKFPKVITHDKRLNNVQKEIENFYDAIEPLYNK
                     ILVFLLQLPPSLQIAEGLDLIKDLKYTLNPSFRYAIEVRHHSWFNELFYNYLKERNYC
                     LVWSQQDTLVTPPILTTDFLYLRLIGDRSIDERDFGKIKKDRTKEMQLWTRIIKDIQK
                     NEKNIKTAIIAANNHYAGFGPMTAKLFAEIMNLQNKVRPFPVLDYQILKKEIKEKKHK
                     NITSKKQWIAKAIFHVDINSFFSSCEEIRDPSLKGKSHAVIMTDQANNNITKGVVATC
                     SYEAKKLGVQSAMPLYKALELCPNLILNAVDKKFYSKISDTVMDILEGYADTFEQASI
                     DEAYLDCTHKIFSSSNTNNIIAVEEYAQEIKKTIKEKCGGLLTSIGVASTKSVAKIAS
                     DYQKPDGLTVVPLNELKDFLNTLEVERISGIGIKTRKILKEKLNIKTIGELAKTDVQI
                     LIERFGKKIGTWMWQVANGENSDPVIPRGDHVSLSNESTLENFTLDKKIIKKS"
BASE COUNT         2596 a         1051 c         1162 g         2396 t
ORIGIN      
        1 agttgtccaa gtttagatag tgctaatcct ttgttgccta gtgcaattgt atagtttggc
       61 tcaatctcca atgctttatc atacaatgct attgcctcct gcagttgtcc taggtcagat
      121 agtgctaatc ctttgttgtt tagtgcatct gtagcatttg gctcaatctc caacacttta
      181 tcataaagtg ctattgcctc ctgtatctgt ccaagattgt agagtgctat tcctttgttg
      241 tttagtgcat ctgtatcatt tggctcaatc tccagtgctt tatcatacaa tgctattgcc
      301 tcttgtagtt gtccaagttt agatagtgct aatcctttgt tgtttagtgc atatgtatga
      361 tttgcatcta tagccaatgc cttgtcgtag tattccatcg cctcgtagta ttggccaagg
      421 cggtagaatg ccattgcttt gttgtttagc accgatgtat cgtttccatc tatagccaat
      481 gccttgtcgt agtattccat cgcatcctca tattctccaa ggtttgatag tgccactcct
      541 ttgttgttta gcgcatctgt attatttgca tctacagcca gtgccctatc aaaatatgtc
      601 aacgcctcct cgtacttttc aagttctaag agtacttctc cttttccggt tatcgcatct
      661 gtattatttg catctacagc cagtgcccta tcaaaataga ctatcgcctc accgtgtccg
      721 ccagaaatat agtattcttc cgcagtatca agtaactttt caatttcttt tgttttgtta
      781 ttggtaatgg taactccaat attatcactg ttgttatttt gtttgccctt tttttctagg
      841 attttattct cttctagtgg ataggcagat gcagcggatg ttattggtat tattgcaatt
      901 agtataatta ttgcaattga aaggaaagta aaaaaccaag atgataaaat caagattttt
      961 ctatttctaa atcttttgat atttagatac atctgaattt aactgactcg tgtattattt
     1021 gaaagataaa ttaaattaac ttttctaagt tcatttttgc ttcaaaaatc gattgataac
     1081 tgttattatt gactaggtat ttcttattga ttataattgg agttttactt ctatctctta
     1141 cgtaagatca attaaaagaa tacaattaat caatcacgta ataagactat tcaatttttt
     1201 tgatataagc aaaatatcaa aactgtcatc gatttgtcat gattgttgat aagttataga
     1261 gaaattgaga ggttgtgcta aatatttacc aatatacttt ttcttcaatt tctttgttat
     1321 agaatcccag taatacgcat aaaagtattg atgtgtgtta tgtctgcatt ctttagaaca
     1381 cttgatcttt tcctatttga tagtagaact ttcaggtatt cctagtttct ctttaatcaa
     1441 tttctctagt cctagaatgt atgagagttc atacctagga attgataatg tatatccttg
     1501 gaaatatggt tcgtacatct ctatactttt gatctttgta cactctttct agttttgata
     1561 ggtcttcttt tactctctgg tacagatatt caggatctct ttcttgctcg tttctcttct
     1621 taatcctctg gatcctcact ttatccatct ttaaataaga aaaatattct ctagttcatt
     1681 gtcttcttta ttacgtgatt taacgaattt acctattagg tttgacggac atttttgcct
     1741 gtaatgctaa atgaaattaa caaattagag atttttgttg tgatattgat tctaaaaatg
     1801 gactcaaaat ataaaaccaa aagcagataa ttaaacatta tgtattagaa ggcattttta
     1861 aaagatttgt aaaattacta cctttcattt tgttatttag attattctga atggttcatt
     1921 ggttatggtg gttctatata tgacaaaaaa aggaatagtg gaaaagtaga aatatttaaa
     1981 aaaaattgaa tcttatttta catttctgaa tgttccacaa ttggaaagtc aacgaacata
     2041 tctacaaatt aacatcgaag aattactgat aatcaatcag tcattgagag agaatgacaa
     2101 ggtaaaagaa gatgtattgg ctcatctatc tgatcaatta ttggttttaa gtgaaagaat
     2161 acagattaat cgctcgaaaa atttaatgaa aatgcaaaaa gaacaaaaat atttaaaaat
     2221 ataataaatg tatcaaatta gattagatga atgaatactc caatctcaat aaatggtgtt
     2281 ggcggaaatg ttactgttac aataatagat gggagtaata acaagacaga tatacgaatt
     2341 gatgattttg aaaatagttt tccacaagaa tgtggattga catttcttta taatgatccc
     2401 tatagaaaag atagtagcaa tacttctact cactttagcg attgggtgaa aggatttcag
     2461 tttaatataa aatcagtata ttatgaaaga gagtataggc gcgaaggatt attaaacaaa
     2521 ataaaaacaa aacttgagca agaccagaga ctccttttat tgggggaatc tggtacatcc
     2581 aaaagcatta ttctgatgga gatattatgc gattatctta aactagatta taaaatatta
     2641 cataatcttg atccagttag tataggaaat agcagtggag agattaaaaa tatccagtat
     2701 attgaaaata caatattaaa acttgttgaa gcgaagaaaa atgttattgt tctagttgat
     2761 gatgtacata ataaaacaat ttcagatatt ttttctgtaa tgaaaaggat tagagattat
     2821 aatgaagata tatttaaaaa aattactttt ttgttgtctg cacgtcaacc agattttgag
     2881 caggcaatga ctggtggagg aatttttcat gcagaaacaa aagatagaat agatctatta
     2941 tttgatgatc caaaaaggga acctatccct tatttctcac aagaagaggt gaaaggtttc
     3001 atagagaaat atagagagta ttgggattca tcactaagaa acaagtctat tgacgaaaat
     3061 gctcaagcaa ttttcaatga tacaaaagga catccaatta tggttagatt ttctgtacta
     3121 aaaaatggac taaaaaacca tgtaagacag atgtatcaag attggcttct tacgaaggat
     3181 aattctctta atattgaaag aataaagtcc gtaatagcct gttcacttta tcatatctct
     3241 tctatacctt taaatgataa aacattaagc gttgaccttg gtctagaaga gccatcatac
     3301 gaacttgata agacaattat aaaaatagaa ggaaatgtct ggacaacaat tcatcccaga
     3361 tgggatcttg aactattcaa ctatttattt tctttaaatg tacatataag aaagatacaa
     3421 agagcattca gttttattct aaataaaatc ttagatatta actccggctc tggaacttgg
     3481 aaccagttac ttattttaga cacagtttat agtactattg cagcaaaaaa gtttgtagat
     3541 atcaaattta ttcaagaaat gataaaagag gatgatatag aaaaaaaaat agaccacttt
     3601 tttaaaccag aattttttaa cattattggt tttgcttata ataaactaga atatcgtaat
     3661 tatgctatag tgtgctgtga caaggccata gaaataaacc cacaatatgt aaatgcttac
     3721 atcaacaaag gcattgctct atttgtactt gtcagaaacg aagaggctat aaagtgctat
     3781 gacaaagcca tagagataga cccacatgtt tcaatgtctt actacttaaa aggcagaatt
     3841 ctattagcag ttggcagata tgaagaggct atagtgtgct gtgacaaggc catagagata
     3901 gacccatatg atacaatgtc ttactacaac aaaggcaatg ctctatcagc acttggtaga
     3961 tatgaagagg ctatagatta ctatgacaaa gccatagcga taaactcaca ggatgcagag
     4021 gcttactact acaaaggggt tattctatca atacttggca gaaatgaaga ggctatagtg
     4081 tgctgtgaca aggccataga gataaaccca cagtatgctc ttgcttacta ctacaaaggc
     4141 gctgctctat cagaccttgg cagatatgaa gaggctatag tctgctatga caagacaata
     4201 gagataaacc cacaagatgc agatgctcat cttgccagag gcattgctct atcaacactt
     4261 ggcagaaaag aagaggctat agcctgcttt gacaagacaa tagagataaa cccacaagat
     4321 gcaagtgctt actacaacaa aggaattgtt ctatctgttc tgggcagata cgaagaggct
     4381 atagtctgcg atgacaagtc cctgactata gatcccaatt atagtgatgc attaaatgga
     4441 aaagcatttg ctttagcaaa ccttggcaaa aatgaagagg ctttaccact tattgaaaaa
     4501 gcacttgaat ctgattcaaa taatgaatat tatctctcaa ctgctgcctt tataatgtat
     4561 aatttaggaa aatatgatga agccaaaaac tattataata aagcattaga tataaatcct
     4621 aacttaaaag acacattatc agaatcagaa ttaaaagcat ttaattcagt tatggaataa
     4681 taatcaaatc aaaataaatt gttataattt gttatttgaa atattttgat tccacaaatt
     4741 tttagtaata atatttaaaa atagatggat ctatagattg gtaagacagt tttctctgga
     4801 tgcaaaacaa ctaaacagat tttttaatcg tatatattct atatctaatt tttggagatc
     4861 ccaaaaataa aacgtatgct attttatcag tattatatcg tactatttat attaggaaca
     4921 ttcagtattc actttttctt tattattaat attatgattc aatcatcata agtagcaaat
     4981 ttctatcata ttctttcttt gaccttatag aataagaatc tccaaagtaa cacattccac
     5041 attttctttt ctttctatta ccttctttag ttggatcaaa tttatatgaa caatttctac
     5101 attttatcat ggtgtaatgt tgtaataata tatttacacc aattattaaa gattgttgta
     5161 ataacaacat taaatcaaaa gttaaataga actatagttc aagttacaat gaactagtta
     5221 gtattaaaaa tgtcaaaaga cgaaatccaa acgtcattga gaatgtcaag agaattactg
     5281 aagaaattaa aacaattcgc attagatcat gatatatctc ttgcaaccgt agttagagaa
     5341 gcctgcgagg aataccttaa aaaacataaa taaaaaatat tactcaatgt tcgtcttatt
     5401 ttgagaagtt tagtttagta cttgtaacat aaaagttcat aatcaaagaa aatgcataga
     5461 acaaaaaact aatgcatttt taaaaaaaag tttttgcttt atttaacact aaaaataccg
     5521 tattggaata ttatctagga tgttctggtt ggagttatga tagatggaaa ggacattttt
     5581 atcctgtaga tttagataat agatattggc tttcatatta ttctcaaata tttgactttg
     5641 ttgagataga ttcgactttc tatagaatac cttcttcttt tatggttagc aactggaata
     5701 aaagaactcc agataatttc agatttgctg taaaatttcc gaaagttatt actcatgata
     5761 agcgtttaaa caacgtacag aaagagatag aaaattttta tgacgctata gaaccattat
     5821 ataacaagat acttgtattt cttctacagt tacctccatc tcttcagatc gctgaaggtt
     5881 tggacttgat aaaggatttg aaatatactt taaatccttc ttttagatac gccatagaag
     5941 tcagacatca tagttggttt aatgaactct tttataacta cttgaaagaa aggaattatt
     6001 gtcttgtatg gagtcagcaa gatactttag ttacacctcc tattctgact acagattttc
     6061 tttatctcag attgataggt gacagaagta ttgatgaaag agattttgga aaaataaaaa
     6121 aagatagaac aaaggaaatg caattatgga ctcgaataat aaaagatatc caaaagaatg
     6181 aaaaaaatat taaaactgca atcatagcag caaataatca ttatgcagga tttgggccaa
     6241 tgacagcaaa gttatttgca gaaataatga atttacaaaa taaagtaagg ccatttcctg
     6301 ttttagatta ccaaatacta aagaaggaaa tcaaagagaa gaagcataaa aacataacct
     6361 ctaaaaagca atggatagcc aaagcaatat ttcatgtaga tataaattca tttttttctt
     6421 catgtgaaga gattagagac ccatcattaa aaggcaaatc acatgcagta ataatgacgg
     6481 atcaagccaa taataacatt acaaaaggtg tagtagcaac atgttcttat gaagccaaaa
     6541 aacttggagt gcaatcagca atgcccttat ataaagcatt agaattatgt cctaatttaa
     6601 tattaaatgc agtagacaaa aaattctatt ctaaaatatc tgatacagtt atggatatat
     6661 tagaaggata tgcagatact tttgaacagg caagtattga tgaggcttat ttggattgta
     6721 cacataaaat tttctcctct tctaatacta ataatataat agcagtagaa gaatatgctc
     6781 aagaaattaa aaaaactata aaagaaaaat gtggtggttt attaacatca ataggtgtag
     6841 catcaacaaa atccgttgca aaaattgcat ccgattatca aaagccagat ggtctaactg
     6901 ttgtaccatt gaatgaattg aaagactttt tgaacacttt agaagttgaa agaatttcag
     6961 gaattgggat aaagacacga aaaattctga aagaaaaatt gaatatcaaa actatagggg
     7021 aattagcaaa aactgatgtt caaattttaa ttgaaagatt tggaaaaaag ataggaacgt
     7081 ggatgtggca agttgcaaat ggagaaaata gtgatccagt tattccaaga ggagatcatg
     7141 tttcattaag taatgaatcg acattagaaa attttacatt agataaaaaa ataataaaaa
     7201 aatct
//
LOCUS       DATIAS010000602         2027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2017217, whole genome shotgun sequence.
ACCESSION   DATIAS010000602 DATIAS010000000
VERSION     DATIAS010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2017217"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            582..914
                     /locus_tag="VLA74_12275"
     CDS             582..914
                     /locus_tag="VLA74_12275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51530.1"
                     /translation="MVGVYEINLKTLIIFGDEKRSYVTVLKSIQKLIISDLQKRTVAF
                     IIGETGIQIGIEHFWLWFCIEPVQPFMLVIYISEERNMTVAEKFIQSLVSKYGKHIVY
                     SYRGTWHD"
     gene            complement(1259..1480)
                     /locus_tag="VLA74_12280"
     CDS             complement(1259..1480)
                     /locus_tag="VLA74_12280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51531.1"
                     /translation="MIEERCWIKSSLVRIMMNIEPIKRIHNYRTKKCNAVLKSTANTW
                     MRIRDTPEDNGINTILTNTYKTKIIVQAR"
BASE COUNT          719 a          284 c          275 g          749 t
ORIGIN      
        1 aaaaaatttg tagtatggta ctattagtat gactttttat caattcctct attgccacca
       61 attgcttcag atcgataata tccatactca ctttggaggt cgaaagtggt ctttattaaa
      121 gaaatagtaa aagaatattg aatttttaat atgaacattg cattaacaat aacaattaaa
      181 gacgaaagta aggaaatgtc tttgtaaaag aatttcaaca catttatttc attaaaatat
      241 aattattatc attaatgaca aaatattatt aattattcgt taatatcgct attagtattt
      301 ttaatccata aaaaaagtta tagtaattat tcaacatagc catattagta taagtgaact
      361 tataaaaact tcattaaatt ttaagttata gatctctata tccagcaata aaataagaaa
      421 aattacattt tttagtattt ttatctatgt taggttaaca ttttaacttc acgagagatc
      481 tatatctgtc aacgttctat tccaacaata tatgttgtta agaattgtaa gaaatagaac
      541 atctaaatgt atagttttgt attcttttta tatatacttt cttggttgga gtctacgaaa
      601 taaatctaaa aacattaatt atatttggag atgaaaagag aagttatgtt actgtattga
      661 aatcgattca aaaattgatc atctcagatt tacaaaagag aacagtcgct tttattatag
      721 gtgaaaccgg tattcagatt gggattgaac atttctggtt atggttttgc attgaaccag
      781 ttcaaccgtt tatgcttgta atatacattt cagaagaaag aaacatgaca gttgctgaaa
      841 aattcattca atctcttgta tcaaaatatg gaaaacatat cgtatattca tatagaggta
      901 catggcatga ttaagcctgt aactttttgc atttgaaaca tagattgtat tctccttcag
      961 agaaaagtct tattgaaatg gtaatgtatt atttcaagga tagaacataa agttttgatg
     1021 attattatcc ttacattaat aatgaataga gaaaatgtaa tctacaatag gtatacaatt
     1081 ggatcaaact cttcatttat ctatacagca ccaaaatcag aaacaccatt atagtcaaaa
     1141 ttggagataa atagcattat gtgatcatcc atgaaaatct acctgcatgc tagttatctt
     1201 ttatatcctg tttatccata ttttgttact tttttttttg ctatcaagca tttcttatct
     1261 atcttgcctg tactattatc tttgtcttgt atgtgtttgt aagtattgta tttattccat
     1321 tatcttccgg tgtatcgcgt attctcatcc acgtgttggc tgtagatttt agtactgcat
     1381 tacatttttt tgttctatag ttgtgtatcc ttttaattgg ttctatattc atcataattc
     1441 ttaccaaaga agactttatc cagcatcttt cctctatcat tttttagggc agctccgcat
     1501 tttctctttc catccaacat ctattacagg atgattcaat ttttttgttc acctcctttt
     1561 cagtagttgt tggctaaaag gtgacaaaca tccatgcact ctctaagaat actatgatag
     1621 cttcttcaca tacggttcag taagagcctc gctctcatac gtactatgtt aagtttgaac
     1681 ctagccaaca tacaggaata aacaaactag gagattttca catcggcagc actagagcga
     1741 atatttaaga ataagaaata aaagttctag taggattgtt tctatagcat tatctaagat
     1801 aatatataca aattagaact aattcttatt attatgttat tatagaatta caaatggaaa
     1861 caaaaagctg tctaaaggga ggtaaaatag aatcctacaa aattaaattt tatagcgtag
     1921 attttctaat cattgttata tcataaaaaa atttaagaaa aatatataat attaatatga
     1981 atgtgataaa tacaaaactc gataattaat agcaaaaaat gtttatc
//
LOCUS       DATIAS010000603         3211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_927113, whole genome shotgun sequence.
ACCESSION   DATIAS010000603 DATIAS010000000
VERSION     DATIAS010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927113"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..166
                     /locus_tag="VLA74_12285"
     CDS             23..166
                     /locus_tag="VLA74_12285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51532.1"
                     /translation="MLIAPGGPKTILQKQRLEKFHKEQEQQQEQKQKEQVIKQQQEQN
                     QKQ"
     gene            222..605
                     /locus_tag="VLA74_12290"
     CDS             222..605
                     /locus_tag="VLA74_12290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51533.1"
                     /translation="MTEQNNNSNNNRNKEQINISLELSNLIEEYVSQFLKVRELYFKI
                     DKKAKKENFTEDFIDALLYEKFTGAIKKSKSSSTTTATTITTTIQSPKVVAAETNTTT
                     TTSKTNNDTKNEENKYFQQYFQHFQ"
     gene            687..1064
                     /locus_tag="VLA74_12295"
     CDS             687..1064
                     /locus_tag="VLA74_12295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51534.1"
                     /translation="MSVSLKEFCSKSNNKELANETVRCGSCQNILLHCGKYDIIKVDK
                     DGNEGLLCETCKKNNRSLEMVTRISSSSDGNHVFQIPISQLDKIIQPTHATDSIEKAT
                     KETKFIPKQLNSNVELVPHQSNK"
     gene            1129..1374
                     /locus_tag="VLA74_12300"
     CDS             1129..1374
                     /locus_tag="VLA74_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51535.1"
                     /translation="MTHKTGNIGFGNLTGLRPMASNNNNDNNDSSSIKIMRISYDIYE
                     KLRDHSRKYHDQPISYDDIFEELCTFYNEHHERKYSF"
     gene            1545..2273
                     /locus_tag="VLA74_12305"
     CDS             1545..2273
                     /locus_tag="VLA74_12305"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HSF51536.1"
                     /translation="MKDKISKNISNNDYQSDKTKSNVKHKYLVEIVGTFILVYAIASA
                     VTIYSDSGQLGVIGIGLVHALVLTAIIYAIGYRSGAQVNPAVTIGLLVARKIGGKEAA
                     LYIICQLIGAVIGAAVVYAMFGSAMSASVTLPSENNIIRAFILETVMTFTLVYVVMAT
                     TTAKNFKIAPLAGVAIGFTLGFNVIFGGSITGGSLNPARSFGPALMTGNFDFNWLYWI
                     APIFGGIIAAGLYKALHRDTDLPE"
     gene            2632..2907
                     /locus_tag="VLA74_12310"
     CDS             2632..2907
                     /locus_tag="VLA74_12310"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51537.1"
                     /translation="MLNGENDTQTPVEGALLLQQKLTEINHPDHVMITYPDLGHKFYP
                     SSPWQTGIGPIQQYVLADIYSWLESHNGFTPLTTFSSSSYTSKTPLK"
BASE COUNT         1269 a          484 c          483 g          975 t
ORIGIN      
        1 atcatatgaa gaacttgtat aaatgttaat agcaccaggt ggaccaaaga caattttgca
       61 gaaacaacga ttagaaaagt ttcataaaga acaagagcaa cagcaagaac aaaaacaaaa
      121 agaacaagta ataaaacaac agcaagaaca aaatcaaaaa caataaattt attttattat
      181 ttcttgatat tataataata atttgtgtga tatgatattt tatgactgaa caaaataata
      241 atagtaataa taataggaat aaagaacaaa taaacataag tttagaactt tcaaatttaa
      301 ttgaagaata tgttagccaa tttcttaaag ttagagaact ttatttcaag atagacaaga
      361 aagcaaaaaa ggaaaatttc acagaggatt ttatagatgc attgctatat gagaagttta
      421 caggagcgat aaaaaaatct aaatcttctt ctactactac tgctactact attactacta
      481 caatacaatc accaaaagta gtagcagcag aaacaaatac aactactact acatcaaaga
      541 ctaataatga tactaaaaat gaagaaaata aatactttca acaatacttc caacattttc
      601 aataaataaa taaataaata aatgagctaa acaaacaaac aaaaaaaatt tagctttgag
      661 tatttataat caaaacatag attagaatgt ctgtatcatt aaaagaattt tgttcgaaat
      721 ctaataataa agaacttgct aatgagacag taaggtgtgg ctcatgtcaa aatatcttat
      781 tgcattgtgg aaagtatgat attattaaag ttgataaaga cggtaatgaa ggtttgttat
      841 gtgaaacttg caaaaagaac aatagatctc tagagatggt aacaagaata tcatcatcat
      901 cagatggaaa tcatgtcttt caaataccaa tatcacaatt agataaaata atacaaccaa
      961 cacatgcaac agattcaata gaaaaagcaa caaaagagac gaaattcata cctaaacaac
     1021 tgaattcaaa tgtggaacta gttccacatc aatcaaataa ataaataaaa aataaaatag
     1081 aatctatgta tagtagaaga atagaaaatt aatggtgtaa taaaagatat gactcataaa
     1141 actggcaata tcggatttgg taatcttact ggattaagac ctatggctag taacaacaac
     1201 aacgacaata acgatagcag tagtatcaag ataatgagga tttcatatga tatctatgag
     1261 aaactaagag atcatagcag aaaataccat gaccaaccta tctcatatga tgatatcttt
     1321 gaggagctct gtacctttta caatgaacac catgaacgaa aatatagttt ttaacttgac
     1381 taatatttta ttattttttt gtattgttca aacatcaaag acattaatag tgattctgtt
     1441 gcataatttt ctcctttagt atctattgca ttataatatt tgtctatgat gaatcataac
     1501 aaggttttac caatacttat taagagtaag taaagcgacc atttatgaaa gataagatat
     1561 ctaagaatat atcaaataat gattatcaaa gtgataaaac aaagtctaat gtcaaacata
     1621 aatatttagt agaaattgtg gggacattta ttttagtata tgctattgct tctgctgtta
     1681 ctatctattc tgatagtgga caattagggg taattgggat aggattggta catgccctag
     1741 tattaacagc aataatatat gctattggtt atcgctctgg tgctcaagtt aatcctgctg
     1801 ttacaatcgg tttattagta gcaagaaaga ttggaggaaa agaagcagca ttatatataa
     1861 tatgtcaatt aattggagca gtaataggag ctgctgtagt gtacgcaatg tttggctctg
     1921 caatgtcagc aagtgtaact ttgccatccg agaataacat tataagagca tttatactgg
     1981 aaacagtaat gacatttact ttagtatatg tagtaatggc taccactact gctaaaaatt
     2041 tcaaaattgc accattagca ggagttgcaa taggttttac acttggtttc aatgtaattt
     2101 ttggtggatc tataactggt ggctcactta atcctgccag atcatttggt cctgctttga
     2161 tgactggaaa ttttgacttt aattggcttt attggattgc tccaatcttt ggaggcataa
     2221 tagcagcagg tctgtataaa gcattacata gagatacaga tcttcctgag taatagtata
     2281 ttaaatcaga acaatagaac cttacgatct acagaaagca aaacagcgag aacgagcagg
     2341 taaatcctcg gtcaatttga ccaagggtca tgcattagat caaatcgctg gttttgttgg
     2401 agtaggaaga acaacactaa aaaagcagaa gaaatagtta acgctgcaga acaagaaaga
     2461 accagagaaa tatcaacaag tttttaaacc aaactgcttt tactattgag gttacaaaca
     2521 gtagacggat tttttgcata ggtgggtgtt atattgtaac ctctgtaaca cccacttttc
     2581 aacttacaaa atataacacc aaacgattca acagaactaa ttatttttct tatactcaat
     2641 ggagaaaatg atactcagac tccagtagaa ggagcattat tgcttcaaca aaaactaaca
     2701 gaaataaatc atcctgacca tgtcatgata acatatccag acttaggaca taaattttat
     2761 ccttcatctc catggcaaac tggtatcggc ccaatacaac agtatgtatt ggcagatatt
     2821 tattcatggc ttgaatctca taatgggttt acacctctga ctacttttag ctcatcttca
     2881 tatacatcaa aaacaccact aaaataaatc attaaaagat aaatcctcaa attttatttt
     2941 tcttaaattt ttcaaaaaaa gttctaataa taaaatctaa atactgtgta gttgaaccct
     3001 actacatgca ggactctact cccgacgggc ccgtagtttt ctcgggttca tccaattcat
     3061 ctattcaaat gaatgaatat ataataatta taacatgaaa cattctctct ggattcgcca
     3121 tattatatca attttctaaa aaatctacta ttaccatttc atcataaaat ctttattcat
     3181 ctatcgtatt ttagatatat tcaagtttag t
//
LOCUS       DATIAS010000604         5152 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1471420, whole genome shotgun sequence.
ACCESSION   DATIAS010000604 DATIAS010000000
VERSION     DATIAS010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5152
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1471420"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VLA74_12315"
     CDS             <1..260
                     /locus_tag="VLA74_12315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51538.1"
                     /translation="AQENPLAMFMYALKAPKSKRQYPKRLKVFLDFLTSNNELIHSNL
                     ENQCREFMTTSQTDPRWANKKLMEFVLYQKERVYKELSYLL"
     gene            854..1096
                     /locus_tag="VLA74_12320"
     CDS             854..1096
                     /locus_tag="VLA74_12320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51539.1"
                     /translation="MAENMSNKSNDYKRDAQNDEIKSIVLGLFALIGFIILISSIFMG
                     VVGESLASVADTVFVAVIIGSFTLVGIIIGRTLLKK"
     gene            complement(1164..1334)
                     /locus_tag="VLA74_12325"
     CDS             complement(1164..1334)
                     /locus_tag="VLA74_12325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51540.1"
                     /translation="MIYIDIRMAMKRVMLSLPEEMVKVLENERKERYLETIPETVRVI
                     LSDYFRNKIKKK"
     gene            1380..2768
                     /locus_tag="VLA74_12330"
     CDS             1380..2768
                     /locus_tag="VLA74_12330"
                     /inference="COORDINATES: protein motif:HMM:NF028105.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HSF51541.1"
                     /translation="MTAINPPRPSLLTKTELEWLMGKKKVSKVYEYRIRSDIKKKLQI
                     FQLSELPLLAQNGFLNELSVFTQLSANTQNKVEQLSSKNNHTSNEIHHSPTINIALGE
                     NSSVIPHFWTRDLFLTKSLSYQGRNSLQGSAFRKVKDDYHNINYNFDKNQQKEILPNS
                     VRIPNNKQGNALSLHQSYQGITRKDSNDLDKKFWDDFEEYLNNSYSKNSIRARLLYAK
                     QYSDILVNCNAQELLTLSNDKRLQVMKSLSVLAKFMGCYDKWKNIKNRYQLKWSNENS
                     IDTFKKIINENNSFNNLLEWLKNTFCQISETHRNLLIYCTLTGLRPDEACQSIRLVKE
                     NINNYHDKEKMILKHFEFPEIFIRRTKQAYVSIANDLIIKVANDSGNHSYNALRCHLK
                     RKKIQMNMNYCRKIFATFMRNNGLQSEIIDLLQGRIPKSVFVRHYYLLTKDYNKDVIS
                     PLLYKLHDVIIK"
     gene            3054..3221
                     /locus_tag="VLA74_12335"
     CDS             3054..3221
                     /locus_tag="VLA74_12335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51542.1"
                     /translation="MKEKRIETLQQKYENDMKTFREDMNNQLSKMILMIQQNPKLSYV
                     KPEILEKINDN"
     gene            3379..3543
                     /locus_tag="VLA74_12340"
     CDS             3379..3543
                     /locus_tag="VLA74_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51543.1"
                     /translation="MNRLNSKLLGIFLPNEVLVKIDRDRGDIPRSRFLLKLIEVAYNT
                     NRIKPQEQFP"
     gene            3631..3834
                     /locus_tag="VLA74_12345"
     CDS             3631..3834
                     /locus_tag="VLA74_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51544.1"
                     /translation="MNITNNKSTVLNNSFTSNTQQNNEDKICNALGCYQLANTEITLT
                     VGAKLLTIFVCEICKSKFKDNHI"
     gene            3837..>5152
                     /locus_tag="VLA74_12350"
     CDS             3837..>5152
                     /locus_tag="VLA74_12350"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HSF51545.1"
                     /translation="MSQNLFNNNNNYNNSADFWYYQIGVNVIPADTENKETYENWSQW
                     QDKPIPDELHEERKRNGEYNKGIAIVTGKIWRGKYKGKYLVAIDCDNKKAIEEFCRDG
                     LEELKQKTLVEQTSNPEKMHIYFIVDGEIPNKASDKCNSETLKKINANEIPAIEVKSN
                     GKGIMFCANSPHQKDGNYRIIGTLKPEVFPASMVEERISLVCKKYNIPYGFCNNGNNN
                     NNYNFNIGPSIQELFTPGTKILKGHNRHLGILRAMDSLLVKNMGFLTLDEIKGHAHKR
                     NLELCVPPLDDRDMERLWNQALDWANRKIREREEAKQKQQNKQKQEEERQNNNNNKNI
                     ASTTTTTSNTKTKVEKQDLIEEATQLVMSIHRFLTIEESKEIFYYDDKSGVYVSGGEV
                     LIEKELDKTFGFKLRTSDITEIKNYVMRKTYVKMQEFDSNLDIINL"
BASE COUNT         2047 a          723 c          773 g         1609 t
ORIGIN      
        1 tggcacagga aaatcccttg gcaatgttca tgtatgcact aaaggctcct aaatctaaaa
       61 gacagtatcc aaaaagacta aaagttttcc ttgatttttt aacttctaat aatgaactaa
      121 ttcattcaaa tttagaaaat cagtgtagag aatttatgac aacatcgcag acagatccaa
      181 gatgggctaa caaaaaactc atggaatttg ttttgtatca aaaagaacga gtttacaagg
      241 aactatcata tttattatga aaagagctaa aaagtactct ttccaggtca tttgcttatt
      301 tacatctatt cctattaaac ggtaaaactt attttcaact attgcaagag tcttttctat
      361 tggtctattt tcataggaaa tcattctagc taaataagtt ccaaaaaaag tgactagaac
      421 taatgttcct cccaatagaa ctaaaagctc tatcagttgt tgttccaata tttattcata
      481 aatcattcct gatttgtgga ttttgctaca atagggagca atttaaagat atcgaagaaa
      541 attaatcata ctagttgata tactcagtat attacaatta tatagtttta tttaatatag
      601 gcttaatcta tatacatatt actcctttct aaatgaatat ataagatttt acatttacag
      661 gtaaataaaa ataattctat ataagtccaa atgcatatta aaattaattt atcttctcaa
      721 ttttgaaata aaaagagtag cagaacatcg attacattga ttccaacaat aggctattgc
      781 ttttactaaa aagtttattt taggaataat ttataaaaat tgtttttata ttattaaata
      841 ggttgtattg gcaatggctg aaaacatgtc taacaagtct aatgattata aaagagacgc
      901 tcaaaatgac gaaattaaat ccatagtttt agggttattc gcattgattg gatttattat
      961 ccttatatct tcaatattta tgggagtagt aggtgaatca ttagcatcag tagcagatac
     1021 tgtatttgtt gctgtaatta ttgggtcttt tactttggta ggaataatta ttggtaggac
     1081 attattaaag aaataatttt cttacaaatg tcacaacaag gaatctttca aaaacatgtt
     1141 tttcaataat aattgtcttt gcattatttt ttctttatct tatttctaaa gtagtcactt
     1201 agaatcactc taacagtttc aggtatagtt tcaagatatc tttctttacg ttcattttct
     1261 aaaactttta ccatttcttc aggtaatgat aacatcactc gcttcattgc catacgtata
     1321 tcaatgtata tcaatagata tctttataaa gatattgacg tttatctatt atcatcactt
     1381 tgacagctat caatccacca agaccatcat tactaactaa aacagaatta gaatggttaa
     1441 tgggtaaaaa gaaagtttca aaagtttatg agtatagaat tagaagcgat atcaaaaaga
     1501 aacttcagat ttttcaatta tccgaattgc ctttacttgc tcaaaatggt tttcttaacg
     1561 agctgagtgt atttactcag ctgagtgcta atactcagaa taaggtagaa caactttcct
     1621 ctaaaaataa ccacacttct aatgaaattc atcattcacc aacgataaat atagccttgg
     1681 gcgagaattc cagtgtgatt ccacactttt ggactcgcga ccttttcctt accaagtctc
     1741 tgagctacca aggcaggaat tcccttcaag gctctgcttt tcgtaaggta aaagacgatt
     1801 atcataatat aaattacaat tttgataaaa atcagcaaaa agaaatctta ccaaattcag
     1861 taagaattcc taataataag caaggaaacg ctctatcttt gcatcagagc taccaaggca
     1921 taacaagaaa agattctaat gatttggata aaaaattttg ggacgatttt gaagaatatc
     1981 taaataattc atatagtaaa aatagcattc gagccagact actttatgcg aaacaatatt
     2041 cagatatttt ggttaattgt aatgctcaag aacttttaac actttcaaat gataaaagac
     2101 tccaagtaat gaaatcatta tctgttttag ccaagtttat gggttgttat gataagtgga
     2161 agaatattaa aaatagatat cagttgaaat ggtctaatga aaactctata gatactttca
     2221 aaaaaatcat caatgagaat aatagtttca ataatctact agaatggctt aagaatacat
     2281 tttgtcaaat atcggaaaca catcgaaacc ttctcattta ttgcacttta actggactaa
     2341 gaccagatga ggcatgccag tctataagat tggtaaaaga aaatatcaat aattaccacg
     2401 acaaagagaa aatgattcta aagcattttg aatttcctga aatatttatc agaagaacca
     2461 aacaagccta tgtcagtatt gcaaatgatt tgattattaa ggttgccaat gattctggta
     2521 atcattcgta taatgcttta agatgccatt tgaagcgaaa gaaaatacaa atgaacatga
     2581 actattgtcg caaaatattt gctaccttta tgagaaataa tggattgcaa tcagaaatta
     2641 ttgatttgct acagggacga atacctaaat cggtatttgt aagacattat tacctattaa
     2701 ctaaagacta caacaaagat gttatatcgc ctttattata caagttacat gatgttataa
     2761 taaaataaat gaagaaaata atttttattt ttttcaaaag aaataataaa agaacatcaa
     2821 taaatttaca aactcttaac caagaaaata aattttcaaa aagaatggat gaattataag
     2881 aagaaaaatt ttctccaaga aatggaatta tgtatatata ggtaacagaa atgaaggaaa
     2941 aacatattat ttcaaattat ccaaaatatg aattagttaa tgctattgaa aataaatact
     3001 gttcaaaatg tagctatcct ctcaaatctg aagcatagaa tgaaattaaa aatatgaaag
     3061 aaaaacgaat agaaacatta caacaaaagt atgaaaatga tatgaaaaca tttagagagg
     3121 atatgaataa tcagcttagt aagatgatat taatgattca acaaaatcca aaattatctt
     3181 atgttaagcc tgaaattttg gaaaagataa atgataatta gtaaatttta taatatatag
     3241 ccatttatat ttccatactt ataaatatac gtagaaactt agccacatat aaactcagta
     3301 aacgtaatat acggagtata ctagtcactt attccataca tatttatatg agttttatca
     3361 atcttatata gaggagatgt gaacagatta aatagtaaac tgttaggaat attccttcct
     3421 aacgaagttt tagtgaagat agatagagat agaggagata ttcctaggtc gaggttcttg
     3481 ctcaaattga tagaagtagc atataataca aacagaataa aacctcagga gcaatttcca
     3541 tgattataaa tcaaaaaaat atcttgtctg atgacagtct tggagggcca gcatcagaca
     3601 agataaaggt attcacaagg agaaaacctc atgaatataa ctaataataa atccacagtc
     3661 cttaataatt cttttacttc caatacccaa caaaataatg aagataaaat atgtaatgcc
     3721 ttaggatgct atcagcttgc aaatactgaa ataactttga cagttggtgc caaattactt
     3781 acaatatttg tgtgtgaaat ttgtaaatca aaatttaaag ataaccatat ttaaaaatgt
     3841 ctcaaaatct tttcaataat aacaacaact acaataattc tgcagatttc tggtattatc
     3901 aaataggagt taatgttatt cctgcagata cagaaaataa ggaaacatat gaaaattggt
     3961 cacaatggca agataaacca attcctgatg aattacatga agaacgaaaa agaaatggag
     4021 aatataataa aggaatagca atagtaactg gaaaaatatg gcgaggtaaa tataaaggaa
     4081 aatatcttgt tgcaatagac tgtgacaata aaaaagcaat tgaagaattt tgtagggatg
     4141 gcttggaaga gttaaaacaa aaaacgcttg tagaacaaac atcaaatcca gaaaaaatgc
     4201 acatctattt tatcgtagat ggagagattc caaataaagc aagcgataaa tgcaattctg
     4261 agactctcaa aaaaataaat gcaaacgaga ttccagctat agaagttaaa agcaatggta
     4321 aaggcattat gttttgtgct aattcacctc accaaaagga tggtaattac cgtattatcg
     4381 gaacattgaa accagaagtc tttcctgctt ctatggtaga agaaagaatt agtcttgtat
     4441 gcaagaaata caatattccc tacggatttt gtaacaatgg taataataat aataattaca
     4501 attttaatat tggcccttct atccaggaat tatttactcc tggaaccaaa atacttaaag
     4561 gtcacaatag gcatttagga attttgcgag ccatggattc attgcttgta aaaaatatgg
     4621 gatttttgac tttagatgaa attaaaggac atgctcataa acgaaatttg gaactttgtg
     4681 ttcctcctct tgatgacaga gatatggaga ggttatggaa ccaagcctta gattgggcta
     4741 acaggaaaat cagagaaaga gaagaggcaa aacaaaaaca gcagaataaa caaaaacaag
     4801 aagaagaaag acaaaataat aataataata aaaatatcgc tagcactacc actaccacct
     4861 ccaacacaaa aacaaaagtc gaaaagcaag accttattga agaagccacg caattagtaa
     4921 tgtccataca tagatttcta acgattgaag aaagtaagga aattttttat tatgatgata
     4981 agagtggtgt ttatgtttct ggtggagaag tattaatcga aaaagaatta gacaagacat
     5041 ttggcttcaa acttcgaact tctgatatta ctgaaattaa gaattatgtt atgcgtaaaa
     5101 cttatgtaaa aatgcaagaa tttgattcta atctagatat aattaattta aa
//
LOCUS       DATIAS010000605         2433 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_382718, whole genome shotgun sequence.
ACCESSION   DATIAS010000605 DATIAS010000000
VERSION     DATIAS010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382718"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..2130)
                     /locus_tag="VLA74_12355"
     CDS             complement(286..2130)
                     /locus_tag="VLA74_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51546.1"
                     /translation="MDNNLIKNNKDTNTDNNSLAGIEGGNIDLSTSKTISILNQLQPQ
                     VREELSKHDWEIISYNPTRFLIAHSEHKQIIFAELKGKDVTRRKNNIVGATIENESNE
                     TISYLKFSRIVIGAIPVEITLNKNPLGLFDHKFTIRFVTPSELSFTVGPKTLDEIVSY
                     LKDRSLVYMTTKATEALSIIINAFEKNGKVIVINDVDTPGFYFMEGKVKNYHTNHPKP
                     TFDQIVSCCELLDILQTKFKNKDVFPTVLKWSIISPFDYILKQVHKKWIPWLYPYGWS
                     NTGKSTLGDICCCIWNRYHDKDAILPFTSVDTKAKLGEALSKSIYPIVINEVAQLNDE
                     YRNKEMIEMIKTSITDLISRKKFVNKTIYTEIPSFSPCILTGNSAPPSDTGFRRRIIP
                     IVFTEKDQYSNKEIEDFKKLFDERIKKELSVLGDFTANYILENQSLLLDGKKEWKEIA
                     EIILTGFYNSTGIISAPEWIKYFVKEDQIGESKEEIDLLFRSYLINKVNETYNKYYRN
                     IEKINQSNSESNAEIPNLPFSDRLNFCLKHNLIPFLNLIETDETDMIAITSDLIHEMK
                     KNISQISSLNEIAAIIEGFEYGQKRVGGKNVRSAFGTRLQLLNFLGME"
     gene            complement(2115..>2433)
                     /locus_tag="VLA74_12360"
     CDS             complement(2115..>2433)
                     /locus_tag="VLA74_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51547.1"
                     /translation="DAEIENTSIINSNNNNTEIIFKHPYQEQAKGILYKINLANRPLV
                     FKIYSNTLSPKLKEELNHLYKNNKKVFNEVVTNSVKRLYESIDFQYFHMNGIGGKIAW
                     TII"
BASE COUNT          716 a          372 c          326 g         1019 t
ORIGIN      
        1 ttttattacg ggttcagtag ctattcttat atcgaattta gatattgtac tcagaagggc
       61 tttcttttct ttctcatctt ttattatgga aaggtaatag tttattgttt cgttagttac
      121 caaagatttg tattgtagtt gaaccatttt aattttttac tcctttataa atttctttta
      181 ataattctat ttcttgcata ttgagattga taaataaaat taaaaaaata tatcatatat
      241 tatatgcagc gctgcatatg ctgcatctgt tatttttatt attcgtcact ccattcctag
      301 aaaattcaac agctgtagtc ttgttccaaa cgcagacctt acattttttc caccaactct
      361 tttctggcca tattcaaaac cctctattat agctgctatt tcatttagac tggaaatttg
      421 agagatattc tttttcattt catggataag atcagatgtt attgctatca tatctgtttc
      481 atctgtttct ataagattca ggaaaggtat tagattatgt ttcaaacaaa agttaagtct
      541 atctgagaat ggaagattag gaatctctgc attagactca gaatttgatt gatttatttt
      601 ttcaatattt ctataatatt tgttatatgt ttcgtttacc ttgttaatta gataacttct
      661 gaataaaaga tcaatctctt ctttactttc tcctatctga tcctctttta caaaatattt
      721 aatccattca ggagctgaga ttatacccgt agaattgtaa aaccctgtaa gtattatttc
      781 tgcaatttct ttccattctt tcttaccatc aagtaaaagg ctttgatttt ctaaaatata
      841 attggctgta aaatcaccta aaactgatag ctcttttttt attcgttcat caaacaattt
      901 tttaaaatct tctatttctt tatttgaata ttgatccttt tctgtaaaaa ctataggaat
      961 tattcttctc ctaaaacctg tatcagatgg aggagcagaa tttcctgtta aaatacatgg
     1021 tgaaaatgag ggaatttctg tataaatagt tttatttaca aatttttttc tggaaatcag
     1081 atccgttatc gatgtcttaa tcatctctat catttcttta tttctatact catcatttag
     1141 ctgtgctact tcatttatca caattggata gatactttta cttaacgctt ctcctagttt
     1201 tgcttttgtg tctactgaag taaaaggcaa tattgcatct ttatcatgat accgattcca
     1261 gatacaacag catatgtcac ctaatgttga tttacccgta tttgaccagc cataaggata
     1321 tagccaagga atccattttt tatgtacttg tttcaggata tagtcaaaag gagaaataat
     1381 agaccatttt aatactgttg gaaatacatc tttgttttta aattttgttt gtaaaatgtc
     1441 tagtaattca caacagctta cgatttgatc aaaagtgggt tttggatgat tcgtatgata
     1501 attttttacc ttcccttcca taaagtagaa tccgggtgta tcgacatcat ttattacaat
     1561 cacttttcca tttttttcaa atgcatttat tataatcgat aaggcttctg tagcttttgt
     1621 agtcatgtaa accaatgatc tgtctttgag gtaagatact atttcgtcta atgttttcgg
     1681 tcccactgta aatgaaagtt cagatggtgt tacaaatcta atagtaaatt tatgatcgaa
     1741 tagtcctaaa ggatttttat tcaatgtaat ttctacaggt attgcaccaa ttacaattct
     1801 tgaaaatttt agatatgata tggtttcgtt actttcattt tcaattgtag ctcctactat
     1861 attgttcttt ctcctagtta catcttttcc tttcagttca gcaaaaatta tttgtttatg
     1921 ttctgaatgt gcaatcagaa atcttgtcgg attatacgat attatttccc aatcatgttt
     1981 tgataattct tctctcactt ggggctgaag ctgattaaga atagaaattg tcttagatgt
     2041 agataaatct atatttcctc cttctattcc agctaaacta ttgttatcag tgttagtgtc
     2101 tttattattt tttattaaat tattgtccat gcgattttac caccaattcc attcatgtga
     2161 aaatattgaa agtctattga ttcatacaat ctctttacag aatttgtgac tacttcatta
     2221 aaaacttttt tattgttttt gtataaatga tttagttctt cttttagctt tggagataga
     2281 gtattactat atattttaaa tactaaaggt ctatttgcaa gattaatttt atataatatg
     2341 ccttttgcct gttcttgata tggatgttta aatataattt ctgtattatt gttattgctg
     2401 ttgataatac tagtattttc aatttctgca tca
//
LOCUS       DATIAS010000606         3736 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_927679, whole genome shotgun sequence.
ACCESSION   DATIAS010000606 DATIAS010000000
VERSION     DATIAS010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927679"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VLA74_12365"
     CDS             <1..333
                     /locus_tag="VLA74_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51548.1"
                     /translation="DRFVMNGIFSIPKRSFNKLLLDSKVTKQFSDIDKIYKSLVTLER
                     INQKLVFNYLFRFGTNLLDENFLLQEEIQFLNKFCGLFKIPTENSYKKEIIRLIKNSE
                     NHLITDFL"
     gene            799..1275
                     /locus_tag="VLA74_12370"
     CDS             799..1275
                     /locus_tag="VLA74_12370"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HSF51549.1"
                     /translation="MNFFNDNDKEYNENNNNENNNNENIDFAAILTGREEVPVVDTLD
                     TALATFQSKDNEDLKFCVKITDMSKIKEVSIDVGKHEKGETVAELYKSETPSDEVTGK
                     LCEGDINSQDLKGPLQGKNTEELVKKIETGEAYVNILTEDKPKGKVRGQIKKLDHI"
     gene            complement(1396..1788)
                     /locus_tag="VLA74_12375"
     CDS             complement(1396..1788)
                     /locus_tag="VLA74_12375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51550.1"
                     /translation="MSSSQSLVTNKKDPAITIKIIKYMIMEHYECPPDSKYCLEVLTE
                     SRKNQVLTRINQDNVVRDVNRPVIATKINCWECGLEIFVHSLVVSNKFSKGRKRRYHF
                     RCALKKNLVEEKTKMHEDYRKFLLGILI"
     gene            2453..3367
                     /locus_tag="VLA74_12380"
     CDS             2453..3367
                     /locus_tag="VLA74_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSF51551.1"
                     /translation="MVTDQLFRIFPIEGVGSGIIIDSQGHILTNYHVVDHARRLKVTL
                     HDGRTFNAKVIGTDKLTDLAVLKIELNSNSFDDSNNNDTDYHDNKSMTSVPFAKLGDS
                     DILKVGQIVIAVGNPFGLTGGPTVTTGIISSINRNIEFEDGVLELVQTDAAINPGNSG
                     GPLVNTSGEVVAINTAKIPYAHGIGFAIPVNTAKKVLEELIQYGKVNRPWLGISTIKI
                     TGRIARYYRLPTNEGALVVKVEEYSPAADAGIRPGDIIEEIDDKRIEEITELSSQIKK
                     KKINEKTLLSVNRYGRRFNVSVILENQP"
BASE COUNT         1352 a          536 c          645 g         1203 t
ORIGIN      
        1 gatagattcg taatgaacgg aatatttagt attccgaaga gaagttttaa caagttacta
       61 ctcgatagta aggtaacaaa acaatttagt gacatagata agatatataa aagtctggtt
      121 acattggaaa gaataaacca gaaactggtg tttaactatc tatttagatt tggaactaat
      181 cttttggatg agaatttttt gttacaggaa gagatacaat ttctaaataa attttgtggg
      241 ctttttaaaa tacccacaga aaattcatac aaaaaagaga ttatcagatt aattaaaaat
      301 agtgaaaatc atttgattac tgattttcta taattattac gatagtccga aatattaatt
      361 ttataaaata actataatat tttgtagtag gttgttgact aaattcaaaa tctaaagata
      421 aaattgagta ttaaatatta aaaatcacca gaaatatttt tgattaattt cctgtagtta
      481 ttaaatcatt tagatcaata gagagatgaa ggttcctatt ataaataaaa attaactaca
      541 ttgttgaagt gtgacatacc gtggatgctg taacaagaca attgcggaac gaagaaaatg
      601 aattattcat tttctagccc tttctactcc gatataatca aaaacaacat ctagtctaga
      661 tttaatacgt gaagatgaaa ctttgaccaa taggaaaata gtcagataaa ccaatttcca
      721 cctaagatta cgacgtatat ttactaatta gagatatact gaaactatta taagaaatgc
      781 tgtgtataac aaactacaat gaattttttt aatgataatg ataaagagta taatgagaat
      841 aataataatg agaataataa taatgagaat atagattttg ctgcaatact tactggaaga
      901 gaagaagtgc cagtagtaga tactttagat actgctttag caacattcca atccaaagat
      961 aatgaagatc taaaattctg cgttaaaatt acagatatga gtaaaataaa agaagttagt
     1021 attgacgtag gtaaacatga gaaaggtgaa acggtcgcag agctatataa gtctgaaact
     1081 ccatcagacg aggttaccgg caaattatgt gaaggggata taaattcaca ggatcttaaa
     1141 gggccgttac aaggaaagaa tacagaagaa ttggttaaaa aaatagaaac cggagaagca
     1201 tatgtaaata tattgacaga ggataaaccg aagggaaaag taagaggaca aattaaaaag
     1261 ttagatcata tttgagaatt tttatgaata ttaaagaaat aataaatatt agaaatgagg
     1321 ttgtaggacg atgatgcttc catcttgttg gtgctagttg tcaccagggt gttttgccta
     1381 cgaggtcaca ccatctcaaa ttaatatacc taacaggaat tttctataat cttcatgcat
     1441 ctttgtcttt tcttctacga ggttcttttt caaagcacac ctaaagtggt atcgtctttt
     1501 tctacctttt gaaaacttgt tcgatacaac caggctgtga acaaagattt ctagaccaca
     1561 ctcccaacaa ttgatttttg tggcgataac tggtctgttt acatccctta ccacattgtc
     1621 ctgatttatt cgtgtaagaa cttgattctt tctactttct gtaagtactt ctagacaata
     1681 cttggagtct ggaggacatt catagtgttc cataatcata tacttgatga tctttatggt
     1741 tattgctgga tcttttttat ttgtaacaag ggattgcgaa gaagacatat ctacagaatt
     1801 ttttgataat tatattaaag ttttccccaa aaagttaaga caatgttttt atccttccgg
     1861 taggcctctg tggcctgaat atttttatct taaaatcagt ttatttgaat ttcatgtcat
     1921 tcgtctttgc tttcttttta aaagtctgtt ttatgtgaaa gtgcttcgat gaaaatggat
     1981 tcttgggtac atttatccat atctttctaa aaccgttata accttttctg tgcttttgaa
     2041 gttggggagc gtcgtctgtc tgatggctat acttggttgt acagacgttc gcctgacata
     2101 aaaaaactct gcattggttg tagttctcat caggtagtca tgacctccct tttttcatat
     2161 ttccatttaa cactttgtag attctgtaaa cagcatcgat cagagagtat tattgagggt
     2221 gaccaaataa ttaaaaatta atcaatttag tcatctcctt ctaatataat actagtatgt
     2281 atcgtataat tataagtcaa ccaacgataa agaaaccacc taatactcca tcaaaaccta
     2341 aatcaccttt agaacgagta ggtataaaat tctgatttct ataactgaag ctacatttat
     2401 cgacgctatt gaaaaaataa ctaagaatgt agttaatatt gcaagtgtta aaatggtaac
     2461 tgatcagctc ttccgtatat ttccaattga aggtgtagga tctggcatca tcatcgatag
     2521 tcaaggtcat atactgacaa attatcacgt agtcgaccat gctaggagat taaaagttac
     2581 cttacatgat gggagaacat ttaatgctaa agtaattgga actgataagc taactgatct
     2641 tgctgtatta aaaattgaat tgaattctaa tagttttgat gactctaaca ataatgacac
     2701 tgattatcat gataacaagt caatgacctc ggtgccattt gctaaattag gagattcaga
     2761 tattctaaaa gtgggtcaaa tagttattgc tgttggtaat ccatttggcc ttacaggagg
     2821 acctacggtt acaaccggaa ttattagttc cataaatagg aacatcgaat ttgaagacgg
     2881 agtattagaa ttggttcaaa ccgatgccgc aataaatcca ggcaattccg gcggaccttt
     2941 ggtaaatact agcggagaag tagttgccat caataccgca aaaataccct atgcccatgg
     3001 aataggattt gcaatacctg taaatactgc aaaaaaggta ttggaggagt taatacaata
     3061 tgggaaagtc aatcgaccat ggttaggcat ctctacgatc aagataaccg gtagaatagc
     3121 tagatattat cggttaccaa ccaatgaagg tgcactagtt gtaaaggtgg aagaatatag
     3181 tcccgcagct gatgcaggaa taagaccggg tgatattatc gaggagattg atgataaaag
     3241 gatagaagaa ataacagagc tttcatctca aatcaaaaag aagaagataa atgaaaaaac
     3301 tttattatct gtgaatagat atgggagacg atttaatgtc tcagttatat tggagaatca
     3361 gccatgacta tttttatttt tatgttttct gttactaaat gagttcattt tacttaccat
     3421 atagtaagtt gctttataca tatccactta ccaatttata tatacttaca ttaatatagt
     3481 taatgtggtg tgtaaataaa aataaaagaa aatactcaaa ataaaaataa tatagataag
     3541 gataatttaa ccgtattact tacatcgttt ccggataaac aaaagatata tgataatgat
     3601 tcctctatat ctttctcaga ccttagacaa catgatatag atattatgaa tattttgtat
     3661 ggtaacgcag atgaaaatac tgtagccaca ttttcattta atggactgaa aaatatgttg
     3721 aatatacatc aagaaa
//
LOCUS       DATIAS010000607         5859 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1606646, whole genome shotgun sequence.
ACCESSION   DATIAS010000607 DATIAS010000000
VERSION     DATIAS010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5859
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1606646"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..132
                     /locus_tag="VLA74_12385"
     CDS             <1..132
                     /locus_tag="VLA74_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HSF51552.1"
                     /translation="RTHSWMNRFRRLLIRWEKKEDNYIAILHFVCAWITYKRGGVFG"
     gene            complement(431..1462)
                     /locus_tag="VLA74_12390"
     CDS             complement(431..1462)
                     /locus_tag="VLA74_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HSF51553.1"
                     /translation="MNNDYTLWILFSIFVGIALSIDLGLFGKLKNILSKQKEKNPIHN
                     HTQDILDSSHESLQKLQQQQTRNALWWTIIWISLAGIFAIIVYFNMGNEKMLEFVTAY
                     TLEKSLSVDNMFIFLLVFSTLSIPYIYQHRILSVGILSAIVFRILLVLVGVSLLESFH
                     WMIYVFGGLLILTAIRLLFQKKEKKIDLEKNIAIRILKTFVPINLNINSNKFLLRQEG
                     ILYATPLLVALVIIELADILFAIDSIPAVLAISSDYFIVITSNIFAILGLRSLYLLLS
                     GIMEKFYYLKPALVLLLFFIGFKMLISEVYKMPVLISLIIIFAILSSAIILSLVKIKQ
                     KRSSTIRKE"
     gene            complement(1931..2065)
                     /locus_tag="VLA74_12395"
     CDS             complement(1931..2065)
                     /locus_tag="VLA74_12395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51554.1"
                     /translation="MLEDKSTIEYDTIIIIDIPVINKINPITKIAKNTRFANLKSHSI
                     "
     gene            2645..2911
                     /locus_tag="VLA74_12400"
     CDS             2645..2911
                     /locus_tag="VLA74_12400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51555.1"
                     /translation="MGILDTSPKFGVLSGGASSYSTNSSSGIAVANPEDPTRVILYKT
                     EHIAVLQKTQEIKFITTFDDITKEGYRLMAISEGRFYFQKILDK"
     gene            complement(3109..4560)
                     /locus_tag="VLA74_12405"
     CDS             complement(3109..4560)
                     /locus_tag="VLA74_12405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51556.1"
                     /translation="MNIDKTIKDLSSRLDEVHPYSASTSNEIKNDGITYWKGKKIIST
                     KAWNDLYEKSSTYTDTYKITLASRKPLQYFPDDYNSQISITGIKDEKLKEEIQQWNKD
                     YYELLEYRKNPTLGRMKCTKCVLSGSNDDPIFVGIEKVFARIVTNQCNNNINTHSNGF
                     ITYHCSVMNLFSCPFESIKSYNEKPIESKYPYKREDLFTLHQLSFAIEQAITTFSEIT
                     KNNEIIYEVDFEKDRFQEIHTKYNGEPESWGWNDNVEKQLAKVQPISPIQIRNEQDIY
                     NILTDREKLEYLLQEYEKKYSHQLDEEKIQHVCCDENTPCVHDDDSNNNNNKVVSSTL
                     TTSTTTDTLAAAARKKQQQIQNQEDYSHKGENRHSKNNTSEEGLDNEKLISILKTQIK
                     EDELEEQEKEQKIFLKENRQNIIDFIIENKDVIRIEDLKIYGSVYKCYREKGNCNICN
                     MLTNIICINCNNYKNKEVWLCTNHWKEYVITYY"
     gene            complement(4547..5029)
                     /locus_tag="VLA74_12410"
     CDS             complement(4547..5029)
                     /locus_tag="VLA74_12410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF51557.1"
                     /translation="MTIDQQNSSFNFDYNDTNSNSNNSKSKFIIEERRRLVAKLWAQS
                     KTETEIARELHCNVSTICRDIKFLKKLSQQFVFDLAKDLGFYYKGCIDTMDQIQQKCW
                     NIYNDDSISQKDKLLALKIIKETCESKFSLIEKGPSVMTLNSLQERVEKIEMSNNEYR
                     "
BASE COUNT         2030 a          773 c          800 g         2256 t
ORIGIN      
        1 agaacacact catggatgaa tagattcagg cgattattga ttagatggga aaagaaggaa
       61 gataactata ttgcaatatt acattttgtc tgtgcttgga taacatataa gagaggaggt
      121 gttttcggat aggctctaag agtttttctt atcattctag tgattggatt atcattgatt
      181 ggattatggt tatatcttga tataagaaag ggagagaagc agaaaaaaag agaagtatat
      241 cttaatacta cacaagcatg tatatgtgta atttgtaaac ataaagaaac gaagatttgt
      301 ttgcaacaaa aatgcgcatg ctgtattata ataaaaggag atgttataat tggacataac
      361 taataattca ttgtagtaaa agatgatact agaatataat agtccaacaa aaaatttaag
      421 tggacataga ctactctttt cttatcgtag aactcctctt ttgttttatc tttactaatg
      481 ataatataat tgcagatgac aagatagcaa atataataat taaagatatt aaaactggca
      541 ttttataaac ttcagaaatc aacattttaa atcctataaa gaaaagcagt aacactaatg
      601 caggttttag ataataaaat ttttccatta taccagatag aagaagatat aaacttctaa
      661 gtccaagaat tgcaaatata tttgatgtaa taacaataaa gtaatctgag gaaatagcca
      721 aaactgctgg aattgaatca atagcaaata atatgtcagc cagctcgatt atcactaatg
      781 caacaagaag aggtgtagca tacaatattc cctcttgtct taaaagaaat ttgtttgaat
      841 ttatgtttaa gttaatcggt acaaatgttt ttaatatacg gattgctata tttttttcta
      901 aatcaatctt cttttctttc ttttgaaaaa gcaatctaat agcagttaga attaataaac
      961 caccaaatac atatatcatc caatggaaac tttctaaaag agaaacgcca accaatacta
     1021 atagtattct aaaaactatt gcactaagaa ttccaactga taaaattcga tgttggtaaa
     1081 tatatggaat tgataaagta gagaaaacta gtaaaaatat aaacatgtta tctacgctca
     1141 aacttttctc aagagtatac gcagtaacaa actctaacat tttttcattt cccatattaa
     1201 agtagacaat tattgcaaaa attcctgcta atgatatcca gattatagtc caccataaag
     1261 catttcgagt ttgttgttgt tgtagttttt gcaaagattc atgactagaa tctagtatgt
     1321 cttgagtgtg attatgaatt ggattctttt ctttttgttt acttagtata ttctttaatt
     1381 ttccaaataa tcctaaatca atagataatg caattccaac gaatatactg aacagaatcc
     1441 ataaagtata atcattattc atagatataa attccaatta tagtaaactc catcaaaacc
     1501 taaaatttgg gacgaattaa ctgattctgt cttaaattca attctatttt cattaaaaaa
     1561 ttcattacaa tatatagttt ataagcaatt ataatgaata gtatagtgat ctataggaga
     1621 tatatagatt gtatatcttg taactgtaga attttaatct ttttacattt gtaaaacaac
     1681 gtatcaaata taaaaatgaa gaattctaaa aggttttttg aaatataaaa ttatgatagg
     1741 taatttttga atataactac aaatagataa ttaaaaatcc ttgctagcat ttattgtgat
     1801 atagttgaag tgatgaatct gaaaagtatt taccaaagag agttgaataa atttattttt
     1861 gttttaaata tcattacatt attaagacag aaaaactgca aaaagagatt ttaaatatat
     1921 ggtattaata tcatatagaa tgacttttta aattggcaaa tctagtattt ttagcaattt
     1981 tagtaattgg attgatttta ttaattactg gtatatctat tatgattatt gtatcatatt
     2041 ctatagtcga tttatcctct aacaataagc tctttagtta ttacgggagg agtattagta
     2101 tacttatgat aatttttggt ttttttatga ttatgcttgg agtgtccaaa aagcaaaaga
     2161 aattaactga aaaatagagc tatttatgta ggtttaaaga tttgttctat tagataagga
     2221 tcatttatta aagttaaatt aaacccttca tctttcaacc atttattatc ttaaaggagt
     2281 atcaaaacca tcaccaacta ttaagatatt tttttgaata taatataata atatgtagaa
     2341 gtaaaaaaca ataccctata aatgagaatt tttctatctt tggtgtggtt atttgttatt
     2401 aagtattcgt ttaaatgtaa aatataagcc attgaacatt gttaattgcc attatctaag
     2461 ggagttgaat ggtcatggtt tcagtgttca atcaatcatt gagagaaaat aacaaggtaa
     2521 aaggaagatg cattagctaa tctatcagat caattattag gtttgtgaaa ggatacaaca
     2581 attagaaaga aaacaagtta tgtaagataa ttatttatat acattattac tataattttt
     2641 tcttatgggt atcttagata cgtctccaaa atttggcgta ttaagtggcg gtgcatcttc
     2701 atattctact aattcctcta gcggaatagc agttgcaaat ccggaagatc caactagagt
     2761 tatactgtat aaaacagaac atattgcagt gttacaaaaa acacaagaaa taaaattcat
     2821 aactacattt gatgacatta caaaagaagg atacagatta atggctataa gcgaaggaag
     2881 attctatttt caaaagatat tagataaata atcgaattca ttgcaaataa taagatgact
     2941 acaaacttaa gcactctcat ttcattttag tcatattgca tctggatgat tataaaaaat
     3001 ttctcaatga atataggaat cttaaacaga tagtagaatt tataaattaa ttattgcttt
     3061 tataaattca attgatttgt attttattta atttactttt ttttaatttt aataatatgt
     3121 tataacatat tctttccaat gatttgtaca aagccaaact tctttgttct tataattatt
     3181 acaatttata caaataatat ttgttaacat attacaaata ttacaattcc ctttttctct
     3241 atagcatttg tatacagatc cataaatctt taaatcttca attctaatta catctttatt
     3301 ttctattata aaatcaataa tattttgtct gttctctttt aaaaatatct tctgttcttt
     3361 ctcttgttcc tctaattcat cttcttttat ttgtgttttt agaattgaaa ttagtttttc
     3421 attgtctagt ccttcttctg atgtattatt tttgctgtga cgattttccc ccttgtgtga
     3481 ataatcttct tgattctgta tttgttgttg tttttttctt gctgctgctg ctaatgtatc
     3541 tgttgtcgta gaggttgtta atgttgatga tactacctta ttattattat tatttgaatc
     3601 atcatcatgc acacaggggg tattttcgtc acagcaaaca tgctgtattt tttcttcatc
     3661 caactgatga ctatactttt tttcatattc ttgaagtaaa tattctaatt tttctctatc
     3721 agttagaata ttatagatat cttgttcatt tcttatttga ataggagaaa ttggttgaac
     3781 tttagctaat tgcttttcta cattgtcatt ccatccccaa ctttcaggtt caccattgta
     3841 ttttgtatgg atctcttgaa atctatcctt ttcaaaatca acttcatata ttatttcatt
     3901 attttttgtt atttcagaaa atgtagttat tgcttgttca attgcaaatg atagttgatg
     3961 taaagtaaat agatcttctc ttttgtatgg atattttgat tctattggtt tttcattata
     4021 agatttaata ctttcaaatg gacatgaaaa taagttcatt acactgcaat ggtaggtgat
     4081 gaagccatta gagtgagtat taatattatt attgcattgg ttggttacaa ttctagcaaa
     4141 tactttttca ataccaacaa aaattggatc gtcatttgag ccgcttaaca cacactttgt
     4201 acatttcatt cttcccagtg ttggattttt tctatattca agtaattcat aatagtcttt
     4261 attccattgt tgaatttctt cctttaactt ctcatctttt attccggtta tagatatttg
     4321 actattataa tcatctggaa agtattgtaa aggttttctg gatgctagtg taattttgta
     4381 agtgtctgta tatgttgagc tcttttcata tagatcattc caagcctttg tagatattat
     4441 ttttttacct ttccaataag ttattccatc atttttgatc tcattactag tagaagcaga
     4501 atatggatga acttcatcta atctacttga taaatcttta atggttttat ctatattcat
     4561 tattggacat ttcaatcttt tcaactcttt cctgtaatga gtttaaagtc attacggagg
     4621 gacctttctc tatcaatgag aatttggatt cacaagtttc tttaataatt tttagggcta
     4681 atagtttgtc tttttgagag atgctgtcat cattatatat gttccaacat ttttgttgta
     4741 tctgatccat cgtatcaata catcctttat aataaaaacc gagatctttg gctaaatcaa
     4801 atacaaactg ttgcgacaac ttttttagaa atttgatatc tctacaaata gtagaaacat
     4861 tgcaatgtag ttctcttgct atctcggttt ctgttttgga ttgcgcccac aacttggcta
     4921 ctaatcgtct tctctcttca attatgaatt ttgatttgct attgttacta ttgctattag
     4981 tatcattgta atcaaaatta aaactagaat tttgctgatc tatggtcaat tattgcattt
     5041 attatatatg ctgtttaaac ttttatattt ttactttaat aaaaaattaa agatagtcca
     5101 atagagaatt tttagttata aatttagtcg aattaatgat cttcatagat ctatctagag
     5161 tgatatttat catattcatc taagttacca aaatagaaga aataatataa cttttcatta
     5221 tcaacagtag tagtagcagc aacaatttgt atctttaatt tttcaaatga ttcaggatta
     5281 atacctgcaa aaactaaact aaattgccag cattaatttc tatagtagaa ttatcaaatg
     5341 atgctaacgg taatgaatga tttctgatta attggtagta gtttgctata tgtatccatt
     5401 aaagttccca atctaatact atattctaca gcgtattggt acttacattt ttttgtttct
     5461 gtttgaagct caattcatgc aactttacca gctactatta ttgattgatg gaatcctctg
     5521 cagaatagta ggaggttcac attgaaacct caagtaataa tatctgttag gacgagtaat
     5581 tgattagaca tgaaacacac cagtattagt caattaagag cgtgagattt caagtctccg
     5641 accccttgca ctcacgtttt accgatttct cttcatttat tattctagaa ataatttgtt
     5701 tcatattttg tagtgcatta ttaattatat ctattatata atgattatac tatgattatg
     5761 ttattactaa gacacataac gtataataat gaagtataaa tataatagag atatgcttat
     5821 agaaaaagat ttggagaaaa aatcaactat tcagatatc
//
LOCUS       DATIAS010000608         2166 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1743659, whole genome shotgun sequence.
ACCESSION   DATIAS010000608 DATIAS010000000
VERSION     DATIAS010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1743659"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..811
                     /locus_tag="VLA74_12415"
     CDS             <1..811
                     /locus_tag="VLA74_12415"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSF51558.1"
                     /translation="CILSLAVIISLILPLQYSALKFANAQILKDSQIMIFNSDSKIPV
                     LADGENTALIPKVDVSIEGTPKSDKLKGGIGDDKIDGKYGHDLLRGEDGNDKIKGGIG
                     DDKISGQGGNDIIKGEKGDDILFGGQGDDQLYGNIGDDALDGGEGVNIMVGGRGSDSF
                     LCNQDDIVIDFNASEADQIIGLCKSNEIIAISDYNNNNSPNKSFFGSPQSTSSTAETP
                     SPPLNANDALPNFEPILRLNPNDVHHVDFQSFPQLPIPLNDRDIQGLLQFN"
     gene            1120..1752
                     /locus_tag="VLA74_12420"
     CDS             1120..1752
                     /locus_tag="VLA74_12420"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51559.1"
                     /translation="MEPELIKQQEEDKKYNIIDSVWAEDINGTENGDNITGTINKDLI
                     KGLDGNDTLAGKEAGDDISGGNGDDMIYGNDGRDVLWGKAGNDHVEGGEGNDRIYGDR
                     GNDTLIGGPSNDTLTGGPDRDIFICGTATDTITDFNVTQKDTNPENDCENIENSGNGN
                     AKDNKNLSIQQNDDSSLGNTDIKEETTVANTTPTIDEPKPDSGLFFGLFK"
BASE COUNT          870 a          281 c          355 g          660 t
ORIGIN      
        1 atgtatttta tctttggcgg taataatctc actgatatta cctctacaat attcagcact
       61 aaaattcgca aatgcacaaa ttctaaaaga ttctcagata atgatattta atagcgattc
      121 aaaaattcca gttctagctg atggtgaaaa tacagcacta atacctaaag tagatgtatc
      181 aattgaagga acgccaaaaa gtgataagct aaagggagga ataggagacg acaagatcga
      241 tggtaaatat ggacacgatc tattacgggg tgaagatggc aatgataaaa taaaaggcgg
      301 aattggagat gataaaatta gtggacaagg aggaaatgat ataataaaag gcgaaaaagg
      361 agacgatatc ttatttggtg gacaaggaga tgatcaactt tatggtaata ttggagatga
      421 tgcgcttgat ggtggcgaag gagttaatat aatggtagga ggaagaggta gtgatagttt
      481 tctgtgtaat caggatgaca tagtaatcga ttttaatgct agtgaagccg atcaaattat
      541 tggcttatgt aaatccaacg aaataatagc aatatctgat tataataata acaactctcc
      601 taataaatca tttttcggat cacctcaatc aacatcgtca acagcagaga caccatcacc
      661 acctctcaat gccaatgatg ctcttccaaa ctttgaacct atccttcgac ttaatccaaa
      721 tgatgtgcat catgtcgact ttcaatcatt tcctcaacta ccaataccat tgaatgatag
      781 agacatacaa ggactactac aattcaatta atttttttct cattttttac cttggttatt
      841 agaaacagct agtgcattat aaaaaaaatt tttttgaaaa caaagaaata tacaacaaac
      901 attgttgtat gctatttaaa ttatcaatta atttacataa agctttaagt ataaatctaa
      961 tatcaatttt atggaattat cttccaatac tctttttaat tgtttcacac ttttactaca
     1021 acaagaaaaa aaatgaatat caataacaaa ataaaattcc aaaaaaaaat tttctatatg
     1081 tctctgttat gtatgttttc tctctcttct gttatcttaa tggaacctga actcattaaa
     1141 caacaagaag aggataaaaa atataatatt attgatagtg tatgggcaga agatatcaat
     1201 ggaactgaaa atggagacaa tattaccggt acaataaata aagatcttat caaaggactt
     1261 gatggcaacg atactctagc aggaaaagaa gcaggagatg atatcagtgg aggaaatgga
     1321 gatgatatga tttatggtaa tgatggaaga gatgttttat ggggaaaagc aggaaatgat
     1381 catgtagaag gaggagaagg aaatgacaga atatatggtg atagaggaaa tgatacgtta
     1441 ataggaggtc ctagtaatga tacactaacc ggaggcccag acagagatat attcatatgt
     1501 ggaacagcaa cagacactat aacagatttt aatgttacac aaaaagatac aaatccagaa
     1561 aatgattgtg aaaatataga aaatagcggt aacggcaatg caaaagataa taaaaattta
     1621 tcaatacaac aaaacgatga ctcatcttta ggaaatacag atataaaaga agaaacaaca
     1681 gtagcaaaca caactccaac aattgatgaa ccaaagccag atagtggatt attttttggt
     1741 ttatttaaat agtttacata atatacatat caatagatga tgatcacgta tcatcacaat
     1801 ataataatat tatttctttg ctcttttttt gtttaccaat atatagtcat ataatatttc
     1861 tatttatatt gatgaaaatt attaattaca gtcttaaaat taaacattat gtattgagtt
     1921 gatttatcct atgttgtaca tttcctcaat tataagtagg aatttgaaat tatacaaaaa
     1981 agataatgtt gactaaattt ataaagtaaa agaattttta ttttttatta acttttgtta
     2041 tatgacgaat tgatctatac aaagaaaata gcaataataa taatataata aatgttataa
     2101 agctgaaata tgataatctc aattttatag tttatatata taagagataa tggaaaaatc
     2161 ataaca
//
LOCUS       DATIAS010000609         2561 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1335433, whole genome shotgun sequence.
ACCESSION   DATIAS010000609 DATIAS010000000
VERSION     DATIAS010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335433"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="VLA74_12425"
     CDS             complement(<1..777)
                     /locus_tag="VLA74_12425"
                     /EC_number="1.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II glyceraldehyde-3-phosphate
                     dehydrogenase"
                     /protein_id="HSF51560.1"
                     /translation="MVKLFINGYGNIGRRLATAFNLDKQVNLIGIAKYSADERAKEAV
                     SKGYKIFIPQSIEKDFNNKKLEFSGYIEEAIEQSDIVIDASKEGLGFENKQKYYVPMK
                     KMAIFQGGEDREGRYSVADIIHNSRVNYDKVVDKSYVIQGSCNVSGLGRIMQPLIENF
                     GDRIIRYDVSLIRRWADLEDSKDVKDSIEWDKNPHHQDDVKSFIPNANLFVESYKVPS
                     RMMHLHQMSIRFKDKAPSKNKILDTFANEFGICILNSAKGT"
     gene            949..1536
                     /locus_tag="VLA74_12430"
     CDS             949..1536
                     /locus_tag="VLA74_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HSF51561.1"
                     /translation="MKILIIDNYDSFVYNIAQSLGQNNIKTLVYRNDKVTLNDIRRMN
                     VDAIIISPGPGNPEYKKYFGICNNIIKMLGKEIPILGICLGHQGIVSAFGGKITNAGK
                     TRHGKTSKIYYKNDPLFENVKNPFYATRYHSLIADKKTFPNCLEITANSVDDNEIMAI
                     THKQYPIKGVQFHPESILTDEGLKILNNFISFIKK"
     gene            1533..>2561
                     /gene="trpD"
                     /locus_tag="VLA74_12435"
     CDS             1533..>2561
                     /gene="trpD"
                     /locus_tag="VLA74_12435"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HSF51562.1"
                     /translation="MTDEESNIKNIVNSVFSNEKLPLNEAKDLFRNVIEGKIQNSYVT
                     ALLKQISSRGETVDEILAMIQTIKENSITIHPNIKNHLIDICGTGGDKIKTFNISTAS
                     AIVAASAGSIIAKHGNRSVSGLCGSADFFEFIGLNLNNSPHAVSCDIEKIGIGFLFAP
                     IFHPILKNVSKLRKDIGIRTIFNIAAPLCNPCDNLTGQIIGVSDPLLLNKLAKVTEKI
                     DKNFFIIHSYDGFDEISNTGSNRIIYIKKGEINNFNLNPMEVGIPITTLDNISVKNKE
                     QSVRLTLESIYGLSRKEIEDIVVLNSAPVLVLSDIAKDIKEGIDISRSVIKEGKARKK
                     LQDLISFSG"
BASE COUNT          923 a          371 c          364 g          903 t
ORIGIN      
        1 agttcccttt gcagaattta gaatgcatat accaaactca ttagcaaatg tatctaaaat
       61 tttatttttt gaaggagctt tgtctttaaa tctaattgac atttgatgta aatgcatcat
      121 tcttgaaggt accttatagg actcaacaaa tagatttgcg ttaggtatga aagattttac
      181 gtcatcctga tgatgaggat ttttatccca ttctatagaa tcttttacat cttttgaatc
      241 ttctaaatcg gcccatcttc ttattaagct tacatcatat ctaataattc tatcgccaaa
      301 gttttcaatc aaaggctgca taattcttcc caaaccagag acgttacaac ttccctgtat
      361 aacataggat ttatccacta ctttatcata gtttactctt gaattgtgaa taatatctgc
      421 aacagagtat ctcccttctc tatcctctcc accttgaaat atagccattt ttttcatggg
      481 cacataatat ttttgtttat tttcaaatcc tagtccttct ttagatgcat ctattacgat
      541 atcactttgt tcaatagctt cttcaatata accactgaat tccagttttt tattattgaa
      601 atctttttca atagattgtg gtataaaaat tttataacct ttggaaacag cttcttttgc
      661 tctttcatca gcactatatt ttgctatacc aatcaaattt acttgtttat ctaagttaaa
      721 tgctgtagct aatcttcttc caatattacc ataaccatta ataaataatt taaccatttt
      781 caaccactaa aatcttcttg aactattgag ttaaaagtat aatatatttt atttcgattt
      841 cgattttgtc tttggataag atagaacgcc aaatataaca tcattctcta ttttgtattg
      901 aaatgtttaa atgagtttat aattataaag tataatatct acaaataaat gaaaatttta
      961 attattgata attatgattc ttttgtttat aatattgcac aatcattagg ccaaaataat
     1021 ataaagactt tagtatacag aaatgacaaa gttactctta atgatatcag aaggatgaat
     1081 gtagatgcaa taatcatctc cccaggccca gggaacccag aatataagaa atactttgga
     1141 atttgtaata atattataaa aatgttggga aaagagattc caattttagg aatttgttta
     1201 ggacatcaag gtatagtatc agcttttgga ggaaaaatca ctaatgcagg taaaaccagg
     1261 catgggaaaa cgagtaagat atattataaa aatgatccct tatttgaaaa tgtcaaaaac
     1321 cctttttacg ccactcgtta tcattcactt atagcggata aaaaaacttt tcctaattgc
     1381 ttagaaataa cggcaaattc agtagatgat aatgagatta tggctataac tcataaacaa
     1441 tatcctatca aaggagttca atttcatcca gaatcaatat taacagatga aggattgaaa
     1501 atattgaata attttatttc gtttataaaa aaatgacaga tgaagagtct aatataaaaa
     1561 atattgtgaa tagtgttttc tctaatgaaa aattaccact taatgaagct aaagatttat
     1621 ttagaaacgt aattgaaggc aaaatccaaa attcttatgt tactgctctt ttgaaacaga
     1681 tttcatctag aggagaaaca gttgacgaaa ttcttgcaat gatacaaact attaaggaaa
     1741 attctataac tattcatcct aatatcaaaa atcatttgat cgatatttgt ggtacaggtg
     1801 gcgataaaat caaaacattt aacattagta ctgcatctgc aattgttgct gcttctgcag
     1861 gttcaattat agcaaaacac ggaaaccgat ctgtttcagg tttgtgtggt agtgctgatt
     1921 tttttgaatt tattggatta aatctaaata attctccgca tgcagtatct tgtgatattg
     1981 aaaaaatagg aataggattt ttgtttgcac ctatttttca tccaatttta aaaaatgttt
     2041 ctaaattaag gaaggatata ggtataagaa caatatttaa tattgctgca cccttatgca
     2101 atccctgtga caatttaact ggtcaaatta taggagtttc tgatccattg ttattaaata
     2161 aattagctaa agttaccgaa aaaatagata aaaatttctt tataattcat tcatatgatg
     2221 gctttgatga aatctctaat actggatcaa acaggataat atatattaaa aaaggagaaa
     2281 tcaataattt taatctaaat ccgatggagg taggaatacc catcactact ttagataaca
     2341 tttctgttaa aaataaagag caatcggtaa ggctgactct ggaatcaata tatggtttat
     2401 ctagaaaaga aatagaagat attgttgttt taaattctgc gccagtattg gttttgtctg
     2461 atattgccaa agacattaag gaaggaatag atatttctag atctgtaatt aaagaaggaa
     2521 aagcaagaaa aaaattacaa gatctaatta gttttagtgg a
//
LOCUS       DATIAS010000610         4273 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1744041, whole genome shotgun sequence.
ACCESSION   DATIAS010000610 DATIAS010000000
VERSION     DATIAS010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4273
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744041"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..1682
                     /locus_tag="VLA74_12440"
     CDS             297..1682
                     /locus_tag="VLA74_12440"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSF51563.1"
                     /translation="MLLTFWFSTIPVAFLTLIRFVRNRKTLIEKDLRRIYNDPIIIFQ
                     ITTRSATKTKVVERGINSIIRASNEINYSNYKISVVTEDENDIKNVGKLKNSEIIVVK
                     REYKTNAIKKARALQYAVEYRKNTSENTKNFWIFHMDDESYVTNQTLLSLLKYIREGK
                     GVASEGPIVYPLKFESANPITALAESVRPFGCYDCVSQMTNPPPLHLHGSNLLVRSDI
                     EDTVGWNFGETLAEDQVFGYKIYERYGANALGWHGGILLEQPPLNIKDHFMQRRRWIL
                     GTLQNMNNFPFWHKFKIGFKLASYFMGFVSGIVSTILYIITVVPLFTASIQILIDKLE
                     YNPLTWIQYIISSFFPTVFPEITNQINSITGNNIYNPVDLGSLSLLLLFPYIMWLLSY
                     QIGLTLNLRYNKFTLLKKITFHSYALILSLILGLIETFPAFVAILEYQLRKRIKSMEG
                     IPNYDFYVVNK"
     gene            1728..2276
                     /locus_tag="VLA74_12445"
     CDS             1728..2276
                     /locus_tag="VLA74_12445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51564.1"
                     /translation="MIRINKKLVQSKKLVITCFYLSVTVMLIISGYGLSMSADNYKKY
                     EKIIIGDVLVNTEFPFKGSINLVTYLMIFSLVSWFTAIKIFEDNIINIPTHIKTILQI
                     ISLVSIIICAYELFYNFTVWNSIITDNLISGYFAPNKELINYPKPDTPWNLSFATQMF
                     LAALIITSHSFYTMTKSKNTDL"
     gene            2374..2976
                     /locus_tag="VLA74_12450"
     CDS             2374..2976
                     /locus_tag="VLA74_12450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51565.1"
                     /translation="MNSSIVLRNKKKEVLFIKCKILTFSIALLVGMTLILGNVFSLNE
                     VIAQSTNTDNKNNKPLKNFEKEVPSLKVSFEETDLDLDPFIHKENGIITQIGIPQFFE
                     TQTNDKPEFTVKQGDKLTLEYGKQPLEMKAYIIDYDSDVNEIYPVKQLDYSTIMIPED
                     APQGLKNLEIRCTYDNNEQVSYTTSMFIRTTEDNDDEGKK"
     gene            3501..3644
                     /locus_tag="VLA74_12455"
     CDS             3501..3644
                     /locus_tag="VLA74_12455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51566.1"
                     /translation="MRLAQAITVTVLKTEPIIPAINAPSTDSSRNCGTIVSNQDVIFG
                     KEI"
     gene            3967..4179
                     /locus_tag="VLA74_12460"
     CDS             3967..4179
                     /locus_tag="VLA74_12460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51567.1"
                     /translation="MERINGETITGIALVILSLLFIFAGSVNEVWAIILPGDYLILIL
                     GLAFIALGVYTIIRNKNRPPETSVHH"
BASE COUNT         1626 a          619 c          628 g         1400 t
ORIGIN      
        1 acttgtgcta ttattattat tattattgtt attactgtta ttaccactac ctgtactgcc
       61 agtaccggaa ccaccactac taacactact acccggcaaa ttactattca cgtcaagtat
      121 tttgaaacga ctacatatac attttttctt tttatagtta attaaaaaaa cacatatgaa
      181 ttattaacgg ctattttaat tgaaatcagt attaaaataa taaatttagt gaaaatttta
      241 ttatagagta atttacagga tttgtattgg agatactaaa ttatacatta tatattatgc
      301 tcttaacatt ttggttttct actataccag tagcattttt aaccttaatt agatttgtaa
      361 gaaatagaaa aactctaatc gaaaaagatc ttcgtagaat atacaatgat cctataataa
      421 tatttcagat cactacaaga tccgctacca agacaaaggt cgtggaaaga gggataaact
      481 ctattattag agcttctaat gagatcaact acagtaatta taaaatttca gtagttacag
      541 aggatgaaaa cgatataaaa aatgtgggca aattaaaaaa ttctgagata atagttgtaa
      601 aaagagaata taaaacgaat gccataaaga aagcaagagc actgcaatat gcagtagaat
      661 atagaaaaaa tactagtgag aatactaaaa atttttggat atttcatatg gatgatgaga
      721 gttacgttac gaaccaaacg ttattgtcat tattaaagta tatacgagaa ggaaaaggtg
      781 ttgcctctga aggtcctata gtatatcccc taaaatttga aagtgccaat cccataactg
      841 cccttgctga atctgttaga ccatttggct gttatgattg cgtttctcaa atgacaaatc
      901 ctcctcctct acatttgcat ggaagtaatt tactcgtaag gtcagatata gaagacaccg
      961 taggatggaa ttttggtgaa actcttgcag aagatcaagt ctttggatac aagatttacg
     1021 aaagatatgg ggcaaatgct ctgggctggc atggaggtat acttttagaa caacctccgt
     1081 taaatattaa agaccacttt atgcagagaa ggagatggat actgggaacc ttacaaaata
     1141 tgaataattt tccgttttgg cataaattca aaattggatt caagttagct agttatttca
     1201 tgggctttgt atcagggata gtctcaacaa ttctatatat aattacagtt gttcccttgt
     1261 ttacagcttc aatacaaata ttgatcgaca aacttgaata taatccatta acgtggatac
     1321 aatatattat ttcttctttt tttccaacgg tttttccaga aattactaat caaataaatt
     1381 ctattactgg taacaacatt tataatcccg ttgatttagg atctttgtca ttattattat
     1441 tatttcctta tattatgtgg ttgttatcat atcaaatagg attaacctta aatttacggt
     1501 acaacaagtt tactctatta aagaaaataa ctttccactc ctatgcattg attctctcac
     1561 tcatattggg gttaattgaa acatttccgg catttgttgc tatattagag tatcaattaa
     1621 gaaaaagaat taaatctatg gaaggaatcc caaattatga cttctatgta gttaacaaat
     1681 gaaaagcaaa caaatgatat caatcaatgc aattttcaaa atgcaatatg ataagaatta
     1741 ataagaaact agttcaatca aaaaaacttg taataacgtg cttttatctt agcgtaaccg
     1801 taatgctaat aatttcgggg tatggtttgt ctatgagtgc ggataattac aaaaagtacg
     1861 aaaaaataat tattggagat gtattagtca atactgaatt tccctttaaa ggttctatta
     1921 acttggtgac ttatttaatg atattctcac tggtatcatg gtttactgca atcaaaattt
     1981 ttgaagataa catcatcaat atacctacac atataaaaac aatattacaa attataagtt
     2041 tagtttctat aattatttgc gcttacgagc tattttataa ttttacagtt tggaactcga
     2101 taataactga taatctgata agcggttatt ttgcacccaa taaggaattg atcaattatc
     2161 ctaaacctga tactccatgg aatttgtcat ttgcaactca aatgttttta gctgctctta
     2221 taattacaag tcatagtttt tacaccatga cgaaatcaaa gaatacagat ttatgaatat
     2281 taatgcaaaa ataaatatca aattagaact aaagaaaatt ctttataaat ttacaattac
     2341 atttataaca tttaagactt aagataatta taaatgaata gttctattgt tctaagaaat
     2401 aagaaaaaag aagtgttatt cataaaatgc aaaattttga ccttttcgat tgcattgtta
     2461 gttggaatga ctttgatttt aggtaatgtc ttttccttga atgaagtaat agcacaatct
     2521 acaaatacag acaataaaaa taataaacct ctaaaaaatt ttgaaaaaga ggttccatct
     2581 ctaaaagtgt catttgaaga aacagatctt gatttagatc cgttcataca taaagagaat
     2641 ggaattatta cacaaatagg aataccacaa ttctttgaaa ctcaaaccaa cgacaaacca
     2701 gaatttactg taaaacaagg tgataagtta actttagaat atggaaaaca gcccctagaa
     2761 atgaaagctt atattattga ttacgattca gatgtaaatg aaatatatcc agtcaaacaa
     2821 ttagattatt cgaccataat gattccagag gatgcaccac aagggttaaa aaatctggaa
     2881 ataagatgca catatgataa taacgaacaa gtttcatata caacgtcgat gtttattaga
     2941 acgactgaag ataatgatga tgagggaaag aagtaacaat cttgcgacag gagaaaaccg
     3001 aaataaatgt gaaatttaaa aacatattga ggtgataaat atacctaaag gttgttttga
     3061 ttttttacca aatttttaaa ggttttacaa tgcaatatca ggatgatgtt aattctacct
     3121 actcagaatt ctattaggaa catatctttc catgcaaata tttatcgcct aaaaatctac
     3181 aatcacaatg aaaatttacc gtgcgataag aatgtcaaaa aaatagtttt ggcgaatcta
     3241 aatatgacga aatttattta caaaatcaag tagatgtttt aataaaattc attagataat
     3301 agacagacaa ttcttttaaa gacatattca gaaaaaaaac agtatcttaa aaaccagaaa
     3361 atttaactga ctgatagttc tattttatta ataaatatgt taagccctct agaaataatt
     3421 tcatataatc cgtattatca tgatcaacta agaatatgga attttctgtt caacagagta
     3481 taaaataaaa agatcaagag gtgcggttag cccaagcaat aacggtgact gtacttaaaa
     3541 ctgaaccaat tattcctgcg attaacgcac cgagtactga ctcatcaaga aattgcggta
     3601 ccatcgtttc aaaccaagat gtaatattcg gaaaagagat ataacttccg aatccgatag
     3661 tgaatcctac aagccaaaac atgaatatcg ctaatttcct ggacatttta atcaccatag
     3721 gatgaaatca attttttttc tatatcaaaa agaaaaacgt tatttatcat ttttaggtta
     3781 ttaatgaaga ggatattaag gtagtttgtt aacattcata taatctaagg tataataatt
     3841 tttaactaga ccggcttccc tagattaaat cacgactgta tagcatataa taaaaaaata
     3901 aaatagcgta aaattatgca atagaaagta ataatattta tagtaacaat aactatttgt
     3961 tcttgtatgg aacggataaa cggagaaaca atcacaggaa tagcgcttgt aatcttgtca
     4021 cttcttttca tatttgctgg atcagtgaac gaggtttggg cgataatact tccaggcgac
     4081 tatcttattt tgatactagg tttagcgttt atagcattag gagtttatac aatcataagg
     4141 aataaaaatc gtccaccaga aaccagcgtt catcactaat tttcaacaaa atatcaattc
     4201 caatttattt aaccattttc agaagtttta ttaatagtaa tagcaaatct cttattcata
     4261 ttttgagtct ctt
//
LOCUS       DATIAS010000611         2755 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1472561, whole genome shotgun sequence.
ACCESSION   DATIAS010000611 DATIAS010000000
VERSION     DATIAS010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2755
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472561"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VLA74_12465"
     CDS             <1..666
                     /locus_tag="VLA74_12465"
                     /inference="COORDINATES: protein motif:HMM:NF016330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HSF51568.1"
                     /translation="GSRPKPYKVTISVKMLGNKQWKTAVESMSSQVIYAAKLLAGEMP
                     ENIEKAFAGAPSRLFPSKAEFKAYCTCPDSANPCKHIAAVCYIIAEEFDRNPFMIFEL
                     RGRSREDILTSLRKARNCGTGRDAKEPSSHVDEKDNKSDNDGDTSAPRPLQNFVCSFW
                     HAGKNYRLLDVSMEPSRVNAAVIKRLGEPSFWRLQKNFVDIMEDIYGKVSRIALKEAY
                     APS"
     gene            1009..1419
                     /locus_tag="VLA74_12470"
     CDS             1009..1419
                     /locus_tag="VLA74_12470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51569.1"
                     /translation="MENRSSNNNNNIIGAVGSFNLDDSQRYYVIPETNNKFVVVLDNK
                     EEINPAFPLKDYQLHLNNISSSDYKYSSKASIRKYGDAISHFIKKEIQKGSFLDLFKI
                     YIEEKMNKLNNLNRILFILRFSINSTFKIIFSNP"
     gene            complement(1450..1683)
                     /locus_tag="VLA74_12475"
     CDS             complement(1450..1683)
                     /locus_tag="VLA74_12475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51570.1"
                     /translation="MISSQGQDINQKLFDHFYKIEQKRINSKLPERYAKTVYNSLPDT
                     EILSPESAIKYVKQNSPLDNDEIIVKRYKHLFG"
     gene            complement(1680..1892)
                     /locus_tag="VLA74_12480"
     CDS             complement(1680..1892)
                     /locus_tag="VLA74_12480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51571.1"
                     /translation="MSTSTGLKDNVKPVIRKIYKCKTLSVNIPPTLSKRAQLKNGDYI
                     FSWIDSKNRLVFERVNTGLDKEDSEQ"
     gene            1973..2278
                     /locus_tag="VLA74_12485"
     CDS             1973..2278
                     /locus_tag="VLA74_12485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51572.1"
                     /translation="MDIKKTTIVYQISMNGSLTKSDYGTIYNVLFARRGVSETPSIKS
                     CLIRLCIGTRTKQTFDDINDSILVFWKYDQNLTTLPRFESPLIIPINIRAYPKISLL"
     gene            complement(2254..2715)
                     /locus_tag="VLA74_12490"
     CDS             complement(2254..2715)
                     /locus_tag="VLA74_12490"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSF51573.1"
                     /translation="MTGHNPTDRSKLGTKRHILTDKDGIPLSAVITSANTHDVTVAID
                     TVDSIVIKRPSSKPKHNQKQNLCLDKAYHSKDVEQEIIKRGYIPHIRHRREERIFRRK
                     HPARRWVVERTNSWHNRFRKLFTRYEKKDENYLGLVQLANSLIVYRRLILG"
BASE COUNT          916 a          441 c          462 g          936 t
ORIGIN      
        1 ggttcaagac caaagccata taaggtcaca atttctgtaa agatgcttgg caataagcag
       61 tggaaaacag ctgtagaatc tatgtccagc caggtaatat atgctgcaaa gctacttgca
      121 ggagagatgc ctgaaaatat agaaaaagca tttgcaggag ccccatccag actttttcca
      181 tctaaagcag aatttaaagc atattgtacc tgtcctgatt ccgctaaccc ctgtaaacac
      241 atagctgcag tgtgctacat cattgcggaa gagtttgata ggaacccgtt tatgatcttt
      301 gagctcagag gcagaagccg cgaagatatt ctgacatctt tacgaaaagc cagaaactgt
      361 ggtacaggac gcgatgctaa agaaccatca tcccacgtag atgagaaaga taacaaatcc
      421 gacaacgatg gtgatacaag tgctcccaga ccacttcaaa actttgtctg ttcattctgg
      481 catgctggca agaattatag gcttctcgat gtcagtatgg aaccttctcg agttaatgct
      541 gctgtgataa aacgtcttgg agaaccgtct ttctggaggc tccagaaaaa ctttgtcgat
      601 attatggaag acatttacgg taaagtgagc aggatagcac tgaaagaagc atacgctcca
      661 tcataataat aaatctagat atagattaat attctagttt gtagacaatt tatattttaa
      721 gttataaaat atgaattctt aatatataaa ataaattagt aataattaca aggctgaaca
      781 aaagagctga atttgatggc aacaataaaa gaaataacaa atcagtagta gatgagcaag
      841 ttattaaaga ttctgttaaa tggagtatta cagaatattc tgtatttatt agcaagctgg
      901 taaaaaaaag gcttaagctg gtatactgat gagaaactta aaaagggttg gttctctgga
      961 gtttatgtaa ataatcaagg agaactaaat tttactgatc cttttactat ggaaaataga
     1021 tcttctaata ataacaataa cattatagga gcagttggat cattcaatct tgacgattct
     1081 caacgatatt atgttattcc agaaacaaat aataaatttg tagtagtatt agataataaa
     1141 gaagagataa atcctgcttt tcctttaaaa gattatcaac tacatttaaa caatatttct
     1201 tcttcagatt ataaatattc tagtaaagca agtataagaa agtatggcga tgctatctct
     1261 cattttatta aaaaagaaat tcaaaaaggt tcgtttttag atttattcaa aatatatatt
     1321 gaagagaaaa tgaataaatt aaataattta aatcgtattt tattcatttt aagattttca
     1381 ataaacagta cctttaagat tattttttct aatccatagt tttcctttgt gcttcgtact
     1441 aactgtttat tatccaaaaa ggtgtttata ccttttaact attatttcat cattatcaag
     1501 tggcgagttc tgctttacat atttaatggc gctttctgga ctcagtatct cagtgtctgg
     1561 tagagagtta tagacagttt tagcgtacct ttctggtaac tttgagttga tccttttttg
     1621 ctctatttta tagaaatgat cgaataattt ttgattaata tcctgacctt ggctagagat
     1681 cattgttcgg aatcctcctt atctaatcct gtgttgaccc gttcaaagac taaacggttt
     1741 ttggaatcta tccatgaaaa tatataatct ccatttttca actgcgcacg ttttgatagg
     1801 gttggtggga tatttacgga caaggtttta catttgtaaa ttttacgaat aacgggttta
     1861 acattatctt ttaaacctgt tgaagttgac atacacagtt taaacacttt acaagtaata
     1921 agaagtatta attcttgata gttcttttga gtttacaaaa attacaactt ttatggatat
     1981 taaaaaaact acaattgttt atcaaataag tatgaatggg tcactcacta aaagtgatta
     2041 tggaacaatc tataatgtac tgtttgcaag gagaggagta agtgaaacac cttcaataaa
     2101 atcatgtctt attcgtttat gtattggtac gagaacaaaa caaacattcg acgacatcaa
     2161 tgattcaata ctagtatttt ggaaatatga ccaaaattta acaactttac ccagatttga
     2221 atctccatta attataccaa ttaatataag agcctatccc aaaattagcc tcctataaac
     2281 aataaggcta tttgctagtt gcacaagacc aaggtaattc tcgtcctttt tttcatatct
     2341 tgtaaacaat ttcctgaatc tattgtgcca tgaatttgtt ctctctacaa cccatcttct
     2401 tgctggatgt tttctacgaa atattctttc ttctcttctg tgtcgtatgt gtggtatata
     2461 tcccctttta ataatttctt gttctacatc tttggaatga tatgctttat caagacatag
     2521 attctgtttc tggttatgct ttggtttgga tgatggtctt ttgattacaa tgctatcaac
     2581 tgtatcaatt gcgacagtaa catcatgggt atttgcagat gttataacag cagacagcgg
     2641 aataccatct ttatctgtta gaatatgtct tttggttcct aatttgcttc tatcagttgg
     2701 attatgtcca gtcatcgccc ccctaaaggt gattttactg atatactatc tagag
//
LOCUS       DATIAS010000612         2573 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1745555, whole genome shotgun sequence.
ACCESSION   DATIAS010000612 DATIAS010000000
VERSION     DATIAS010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1745555"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VLA74_12495"
     CDS             <1..488
                     /locus_tag="VLA74_12495"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSF51574.1"
                     /translation="IKPTIEETLRYRSPVQFVSRIAIDDITLYEGGERVGKGEEGRQK
                     QKIQKGQRIILFLGSANHDESIFPDPDRFDITRKNLRHLGFGTGIHFCLGAPLARLEG
                     QIALRIILARLENLEFNFDYTDRQDLYTKISPIKSSSLKSSFLLGLSHLPVSFKPTSV
                     Y"
     gene            935..1195
                     /locus_tag="VLA74_12500"
     CDS             935..1195
                     /locus_tag="VLA74_12500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51575.1"
                     /translation="MSRRNYLTVDPISVSIFLTAFQTLSQPIAGLIFGILFWNIARIQ
                     KTINRIVKDKDILRKHQNINLELDEIELKKYLDKVIKELKKN"
     gene            complement(1360..1557)
                     /locus_tag="VLA74_12505"
     CDS             complement(1360..1557)
                     /locus_tag="VLA74_12505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51576.1"
                     /translation="MPSSTVKYFSCIYCGAEFIAVKPDDIHTKANKYKINRDDIETLH
                     KCIECGKNNKLYWSEQIKRPN"
     gene            complement(1877..2383)
                     /locus_tag="VLA74_12510"
     CDS             complement(1877..2383)
                     /locus_tag="VLA74_12510"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51577.1"
                     /translation="MGGMIAQQLTLNYPGKVDNLIIYASYCGGNQSIPPNQQIVEQFS
                     DLSGSSEDIKTRFIPLLFTQNWIKQNPNYMEKFASLEFPPVDILKKQLNAIFSWEGTC
                     NQLKNISQDTLVIVGTNDLLLSSANSIILTEKIPGAWLAQFRDGGHGVMFQYPERLST
                     LVNTFLNS"
     gene            complement(2371..>2573)
                     /locus_tag="VLA74_12515"
     CDS             complement(2371..>2573)
                     /locus_tag="VLA74_12515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51578.1"
                     /translation="VCLRSNFFKGLSANHKVIVFDNRGIGNTTIGSKNVTIDQFAKDS
                     AGLLDTLKINKSDVFWDIQWVE"
BASE COUNT          907 a          383 c          388 g          895 t
ORIGIN      
        1 taatcaaacc taccatagaa gagactttac gttatcgatc accggtacaa tttgtatcac
       61 gtatagcaat tgatgatata acgttatatg aagggggaga aagagtagga aaaggagaag
      121 aaggaaggca gaaacaaaag atacagaaag gtcaacgaat tatattattt ctgggttctg
      181 ccaatcatga tgaatcaata tttccggatc ctgacagatt tgatattact cgtaaaaact
      241 tgcgtcattt gggttttgga acaggaatcc atttttgttt aggtgcacct ttagccagac
      301 ttgaaggaca aatagcattg agaataattc ttgcaagatt agagaatctg gaatttaatt
      361 ttgactatac tgatagacaa gatctatata caaagatcag tccaataaag agttcatcat
      421 taaagagttc atttttactt ggattatcgc atcttcctgt aagctttaaa cctacgagtg
      481 tatattaaaa atttgtagat gttccttatt taacctatgc tactataatt ctggatacac
      541 agggttactt ccaatctccc ttcaaataag gaggtctcaa caaagacacc ttatatagct
      601 ttaagaatca atatacctgg gtcaatattc tttaaacgtt tttttgttct tctacattaa
      661 ctttagtatt cattctaata atagttaaag gtagagattc ataatcctaa aaaaagagaa
      721 agtgagtgaa atacagagta ttatttacgg cagcaacagc aacagcatat gaagattagg
      781 gaccagatat gtttgatatt ggcataaccg accggccttg ttaagatacc attaattcag
      841 aactaaattg ctccggaatt atgtctgttg aagtaatggg aacttgtgac tggttaatag
      901 gtggtgatgc gctctctagt gactcataat attcttgtcc aggaggaatt atttaactgt
      961 tgatccaatt tctgtttcta tatttctgac agcgttccaa actttaagtc aacctatagc
     1021 aggattaatc ttcggaatcc tattttggaa tattgctaga attcaaaaga ctattaatag
     1081 aattgttaaa gataaagata tcttaagaaa acatcaaaac ataaatttag aattagatga
     1141 aatagaatta aaaaaatatt tagataaagt aataaaagaa ttaaagaaaa attaactcaa
     1201 gaatgtttta tctcctttct cattttaaaa aaatagtttt gtttctaata agaaaaatat
     1261 actaatatgt atgcaaaaag cttcattcac ttttataaaa aaatagttaa ccatatagcg
     1321 tcacaaaagc acagacagta aacagatgtt tactaaaaat tagttcggtc gttttatttg
     1381 ttcagaccaa tataatttat tattcttccc acactcaatg catttgtgta atgtctcgat
     1441 atcatctcta ttaattttat atttatttgc ttttgtatgt atatcatctg gttttacagc
     1501 aataaattca gctccacaat aaatacaact aaaatattta actgtactag atggcatgag
     1561 aaatctatat atattcttct taatctaaat ttatctagat tttttaaaaa tagttaagat
     1621 atttctatat ttttattatt gttattgtct ttttatttta aaaatattga tctattttaa
     1681 atatttaatt tcttaaacat tatatagatt cttttaaaaa tgaccaaatt ttaggtcaaa
     1741 tgtgtctcac aaaccactgg ccccattgtg ttattagttc tcaaattggg ttcactctta
     1801 aataaaaacc tacattctta gtagttgatc tcgcaaaaaa tatgaaaaaa ggagaaatat
     1861 atttttaaat tgttagttaa ctattaagaa atgtatttac caatgtactt aatctttcag
     1921 gatattgaaa cattaccccg tgaccaccat ctctgaactg tgccaaccat gccccgggaa
     1981 ttttctctgt taatattatg gaattagcag atgacaatag aagatcattt gttcctacta
     2041 ttacaagtgt gtcttgagat atgtttttta attgattaca tgttccttcc caagagaaaa
     2101 ttgcattgag ttgtttttta agtatatcaa caggagggaa ttctaaagat gcaaactttt
     2161 ccatatagtt aggattttgt ttaatccagt tttgtgtaaa taaaagggga ataaaccttg
     2221 tctttatatc ttcagaagaa cctgatagat cgctaaattg ttctacaatt tgctggtttg
     2281 ggggaatcga ttgatttcca ccacaataag aagcatatat tattaaatta tcaactttgc
     2341 ctggatagtt taatgttaac tgctgagcaa tcattccacc cattgaatat cccaaaagac
     2401 atcagatttg ttaattttaa gagtatctaa taatcctgca ctatccttag caaattgatc
     2461 tattgtgaca tttttagaac caatagtagt gttcccaata ccacgattat caaaaactat
     2521 gactttatga tttgcagata atcctttaaa aaagttggat cgcaagcata cat
//
LOCUS       DATIAS010000613         2006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2019912, whole genome shotgun sequence.
ACCESSION   DATIAS010000613 DATIAS010000000
VERSION     DATIAS010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2019912"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..810)
                     /locus_tag="VLA74_12520"
     CDS             complement(148..810)
                     /locus_tag="VLA74_12520"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF51579.1"
                     /translation="MISRLFERNRTSTVIVLYSLYLYFLGLSLRNTSKALDIFDDEKR
                     SHIAVWNWIQRFGSLPIYKRKRVSAFIIDETVIQIGWKQFWLWICIEPIHKSVLGIYI
                     SEERNMFVAENFIRSLVEKYGRHTVYTDGGTWYPQACGFLYLKHRLHSPLEKSLIERV
                     MQYFKDRTESFDDYYPCNNKKRNCDLLHVYNWIKLFIYLYNTTIRNKIPFLVNGGELA
                     LS"
     gene            1103..>2006
                     /locus_tag="VLA74_12525"
     CDS             1103..>2006
                     /locus_tag="VLA74_12525"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSF51580.1"
                     /translation="MPFFNLNNVANATRAQPISEGPIVKDSNLKAEVVFEGLTSPTSI
                     AFLGPNDILVLEKDKGTVQRIINGKILAEPLLDINVANEDSRGMLGIAVSKGGEEINS
                     THIFLYFTEAPIGEFPIGNRVYNYELVNNKLVNPKVLLNLPALPGASHNGGAIMIGPD
                     NNIYTIIGDVGGHRNQAQNQESGGEPDGTSGIVRISQDGIPLTNTPIGDRVPLNLYYS
                     YGLRNSFGFDFDPITGKLWNTENGDDFGDEINLVEPGFNSGWNKVQGIWTLDDDEDIA
                     EVAPLHPENGLVNFGGKGKYSSPEF"
BASE COUNT          714 a          306 c          329 g          657 t
ORIGIN      
        1 tgtggtggag gttgtggtgg atgtggataa ttagtacaac aacaaattat tataatatca
       61 aaagattaag acaattaatc agtaaaactt tttaattcta cgttttctat taagtgtaga
      121 taattcaaaa ttcttatagg agtgctgtta acttaaggct aattcacctc cattgacaag
      181 aaatggtatt ttatttctaa ttgttgtatt atacaaataa atgaacaact ttatccaatt
      241 gtatacatgt aatagatcac aatttctctt tttgttatta caaggatagt agtcgtcaaa
      301 actctcagtt ctatccttga aatactgcat taccctttca ataagacttt tctctaatgg
      361 tgaatgcaac ctatgtttta gatataaaaa accacaagct tgaggatacc atgtcccacc
      421 atctgtataa actgtatgtc tgccatattt ttcaactaat gatctaataa aattctctgc
      481 tacaaacatg tttctttctt cagaaatgta gattccaagc acagatttgt gaatcggttc
      541 aatacagatc cataaccaaa actgtttcca gccaatctga ataacagttt catctataat
      601 gaatgctgaa actctttttc ttttgtatat aggcagagaa ccaaatctct gaatccagtt
      661 ccatacagca atatgacttc ttttttcatc atcaaatata tctaatgcct tggaagtatt
      721 tcttagactt agaccaagaa aatacaaata caaagagtat aatacaataa cagtggatgt
      781 tctatttctt tcaaataatc tactgatcat agatagaaat aggatatcca cagctataga
      841 tttatcatta agttaacagg actattacta ctatagaaaa ttaacaagta ttaattgata
      901 taatatttgt agaaaaggat tcactaataa taattaacaa atgaaaataa taataaacat
      961 tagctaagct aatttaataa tacaaaatta acaagcatac ctcacaactt caattatatt
     1021 ttaactgtct aaaaaaaatg atatgcctac gtcagtactt atctttggac ttttgttatg
     1081 ttcattaata atattaggaa taatgccatt tttcaacttg aataatgttg ctaacgctac
     1141 acgtgctcaa ccaatttctg aaggaccaat tgtcaaggat tctaatttaa aggcagaagt
     1201 agtctttgaa ggtcttacat ctcctaccag tattgcgttt ttaggtccaa atgatatttt
     1261 agttttagag aaagataaag gtacagtgca gaggattata aatggtaaga tattggcaga
     1321 accattactt gatatcaatg tagccaatga ggatagtagg ggtatgttag gaattgctgt
     1381 atcaaaagga ggagaagaaa tcaattctac acatattttc ttatatttta cagaagctcc
     1441 cataggtgaa tttccgatag gtaatcgtgt ttacaactat gaattagtaa ataacaaatt
     1501 agtaaatcct aaagtacttt taaatctacc agctctacct ggtgccagtc ataatggtgg
     1561 tgctattatg attggccctg ataataatat ctatactatt attggagatg ttggtggcca
     1621 tagaaatcaa gctcagaatc aggaatctgg cggagagcct gatggaacta gtggtatagt
     1681 aagaatttct caagatggta tacctctaac aaatactcct ataggggata gagtaccttt
     1741 aaacttgtac tattcatatg gcctgagaaa cagctttgga tttgattttg accctataac
     1801 aggtaaacta tggaatacag aaaatggcga tgactttggt gatgaaatta atcttgttga
     1861 accaggattt aatagcggat ggaataaggt gcaaggtata tggacattag acgacgacga
     1921 agatatagct gaagtagctc cactacatcc tgaaaatgga ttagtaaatt ttggtggaaa
     1981 aggaaaatac agttctcctg aattta
//
LOCUS       DATIAS010000614         2447 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_930971, whole genome shotgun sequence.
ACCESSION   DATIAS010000614 DATIAS010000000
VERSION     DATIAS010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_930971"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            372..539
                     /locus_tag="VLA74_12530"
     CDS             372..539
                     /locus_tag="VLA74_12530"
                     /inference="COORDINATES: protein motif:HMM:NF015846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit Sec61beta"
                     /protein_id="HSF51581.1"
                     /translation="MSSKKKNAPLPASSAGLLRFFEDETKGVKVKPEIVLGVTGGLIA
                     ISILIRVIFPV"
     gene            554..2311
                     /locus_tag="VLA74_12535"
     CDS             554..2311
                     /locus_tag="VLA74_12535"
                     /inference="COORDINATES: protein motif:HMM:NF021370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2070 family protein"
                     /protein_id="HSF51582.1"
                     /translation="MEEGLDSVSNIHKRWSFTRINFSSYKISLIISIISLLLIIILTE
                     IYFQQDSVHIIIYSILGLIFIICSYILDFYLLRDTPVNKFSKILHVSAFSNLIWMAIL
                     ILGIVSYMIFNKDNIPIGHIIEGMMVAIGLRLGIFTSVFGAGLKKAIKTAIYQPFLLL
                     FVITPLNSFKELTDAIAIGFGFIILGLGIAWVILVDRSGRPYIQSTFSLLQAFMSAWT
                     ENKVENIEKILISKSREASVSTRIVRFGDEFENINLVLPDIHPGPFKTIGGSNLSFRI
                     WEYYDYKSIVFHSVSDHSLNIPSSEEVVKYLESLSTYKIIQNGTTCSTPIRVTNGSST
                     CTGIAFGNIPLIILSNSPVGMDDVPENLLIELEKYSKEIGFDKILIIDSHNAMGKKLE
                     ETSRNDMLNAAKSCLRTLKNSPQSEFKISYSSIREIQSDINNKDLGKAGISIFMIQIH
                     DKQYFIGWIDSNNMKNGLREHIIKDLEKKDITLLDICTSDTHENSGFRTSEGYFPFGE
                     ITSFDQATKYFIEILSEAQGKIKNAKYEILDSKTSIKVMGNGQFEDYSRALDKSMNLT
                     KIFLAVTFGIIVLMLIVTK"
BASE COUNT          885 a          329 c          392 g          841 t
ORIGIN      
        1 tttcttcttt ttctagttca ccacaagggc ataaatcatc aggtaatcca cattttttac
       61 aaataaccgc catattttat ttacctattc ttttcatatc ttcttattaa gcgttcccaa
      121 gtaaaaagta cagatactaa atctatcgta ttggtgatgt atataaagca atctgtaaca
      181 agatgcaaaa ttgaacatat tttttctagc taacagttat tcaaaccttc aaatattcta
      241 gatattagtt ttagtttgga tcttttaaaa gactaacaaa atcatatcat ctataatttc
      301 aaattctatc tcgcggagcc tttagatgaa acgatatgta tttaagtaat aatgtgctga
      361 agtttatcga attgagtagt aaaaagaaga atgcaccatt accagcttct agcgcaggat
      421 tgttaagatt ttttgaggat gagactaaag gagtcaaggt aaaaccagaa atagttctcg
      481 gggttactgg agggttaata gcaatttcta tattgatcag agtcatattt ccagtataat
      541 agtggctcaa ataatggaag aaggccttga tagtgtttct aatatccaca aaagatggtc
      601 tttcacaaga ataaactttt catcttataa gatttcatta ataatatcta taattagctt
      661 actgttaatt attatactaa cagaaattta tttccaacag gattcagttc atattatcat
      721 ttattctata ttgggattga tttttataat ttgtagttat attttagatt tttatttgtt
      781 gcgtgataca ccggtcaaca agttttccaa gatactccat gtttcagcat tttcaaatct
      841 tatttggatg gcaattttaa ttctgggtat agtttcatat atgatcttca acaaagacaa
      901 tattcctatt ggacatataa tagaagggat gatggtagca attgggttaa gactaggtat
      961 atttacatca gtttttgggg caggcctaaa aaaagcaata aaaactgcga tatatcaacc
     1021 ttttctctta ttatttgtca taactccgtt aaattcattt aaggagctga cagacgccat
     1081 tgccattggt ttcggcttca ttatattagg tttagggata gcatgggtta tattagtaga
     1141 tagatcaggt cgaccatata ttcaaagtac tttttctctc ttacaagctt ttatgtctgc
     1201 ctggacagaa aataaagttg aaaatattga aaagattctg atatctaaat ccagagaagc
     1261 atcggtatct actagaatcg ttaggtttgg cgatgaattc gaaaatatca atttagtatt
     1321 accagatata catccgggac cattcaagac aataggagga agtaatttat cgtttagaat
     1381 ttgggaatac tatgattata aatcaatcgt atttcatagt gtttcggatc attcgttaaa
     1441 tattccatca agtgaagagg ttgtaaaata tttagaatct ttatcaacat ataagataat
     1501 ccaaaatgga actacttgtt ccacccctat aagggtaaca aatggaagtt ccacttgtac
     1561 tggaattgca tttggaaaca tacctcttat aattttatcc aattcacccg ttggtatgga
     1621 tgatgttcca gaaaatctat taattgaatt agaaaaatat tcaaaagaaa ttggttttga
     1681 caagatttta ataatagata gtcataatgc gatggggaaa aagctagagg aaacaagcag
     1741 aaatgatatg ctaaatgctg caaaaagttg cttgagaact ctaaaaaatt cccctcagtc
     1801 ggagtttaaa ataagttatt ctagtatcag agaaatccaa agtgacatta ataataaaga
     1861 tttaggaaaa gcaggaatat ccatatttat gattcaaatt catgataaac aatattttat
     1921 tggttggata gattcaaata atatgaaaaa tggattgcga gaacatatta ttaaggatct
     1981 tgaaaaaaag gacattacat tgttagatat ttgtacctct gatacgcatg aaaattcagg
     2041 atttaggaca tcggaaggat attttccatt tggagaaatt acaagttttg atcaggcaac
     2101 aaaatatttc attgaaatct tatctgaagc acaaggaaaa atcaaaaatg caaaatacga
     2161 gatattagac agcaaaacat caattaaagt tatgggaaat ggccaatttg aagattattc
     2221 gagagcctta gataaatcga tgaatttgac taagatattc ttagctgtta cgtttggaat
     2281 aatagtattg atgttaatag ttacaaaata actccatatt aaataacatg aaaatattaa
     2341 tccatgatta tattaatttt atatcttgtt ttttataaag attgaaatta ttttctataa
     2401 atctaaacat aacttgttta taattttagt tataaaaata ttataaa
//
LOCUS       DATIAS010000615         2725 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1475491, whole genome shotgun sequence.
ACCESSION   DATIAS010000615 DATIAS010000000
VERSION     DATIAS010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1475491"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..973
                     /locus_tag="VLA74_12540"
     CDS             <1..973
                     /locus_tag="VLA74_12540"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51583.1"
                     /translation="STLPQDNNKATTTKEKSPSSFNIAVAADWGCKEDAKKTSKNIQH
                     KNPELVIAAGDLSYEGQGDCWEDIISPFESKLKVSMGDHEYHDTQGGTTGVINEYLKP
                     LNLAKTYYSFNLDNVHFVFIDPYIDYRPGSSQYQFIEQDLKTASTNPKIDWTFVVEHI
                     PMYTSPTKHPADSIIRDIYHPLFDKYGVDLVFSGDNHNYQRTFPLKYNNNNNGDGYSS
                     NNPIISNSDKNNYNADRGVIYLTTGTAGRSHYEIKQQASFVAKQDDKHFGFLNMDISG
                     NTVKGTFIANENEQGFINVGFQQNNRIIDHFTISKTDTSNNNQSNKL"
     gene            1051..2034
                     /locus_tag="VLA74_12545"
     CDS             1051..2034
                     /locus_tag="VLA74_12545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51584.1"
                     /translation="MKKEKIIIKTSLIILFWFFLLIAITYFINDILIFSQHNKYEDQK
                     SVNQENVAGLHIVEVKYQEASFSDFDIFGIKKIYPTKKSGFEWFMNNYDPESDPYMHN
                     YKSIVKNEDGSYNIGERSRMGVYSKDGIGYPKGNMETYNFTELSKKGYWYKPSDWKNV
                     EITGEYLYKKGKGPGITHYARSEDHSTINNGCGGSSYKLKIHFDGTSSISKEQSHAKP
                     WKISMNKSPFGKLDKDWFRFKGIMYNLPDGTVKLENWLDPFLNNTWIKIAEYQDKGGW
                     GKDGNKCQGKDDHIITWGSPTATFRWDDALVDFRNLSVREIQPRIIQDLIS"
BASE COUNT         1023 a          365 c          450 g          887 t
ORIGIN      
        1 ctctactctt cctcaagata ataacaaagc tacaacaaca aaagaaaagt ctccttcttc
       61 cttcaatatt gcagttgcag cagattgggg atgtaaagaa gatgctaaaa agacatctaa
      121 aaacatccaa cataagaatc ctgaacttgt tattgcagca ggtgatctaa gttatgaagg
      181 acagggagat tgttgggaag atataatttc accatttgaa tcaaaattaa aggtatctat
      241 gggtgaccat gagtatcatg atactcaagg tggtacaaca ggtgtaatta atgagtattt
      301 gaaacctttg aatttagcaa aaacatatta ttcttttaat ttggataacg tacattttgt
      361 ttttatagac ccttatattg attatagacc tggttcatct caatatcaat ttattgaaca
      421 agatttaaaa actgcttcta ccaatccaaa aatagattgg acatttgtag tagaacatat
      481 cccaatgtat acttcaccta ctaaacatcc tgcagattct ataatcagag atatttatca
      541 tcctcttttt gataaatatg gtgttgactt ggtatttagt ggagacaatc acaattacca
      601 aagaacattt cccttaaaat ataataataa taacaatggt gatggttata gttctaataa
      661 tcctatcata tcaaatagcg ataaaaataa ttataatgca gataggggag tgatttatct
      721 aacaactgga actgcaggaa gatcacacta tgaaatcaaa caacaagcat cttttgttgc
      781 aaaacaggac gataaacatt ttggatttct aaatatggat attagtggta atactgtaaa
      841 aggaactttc attgcaaatg aaaacgaaca aggatttatt aatgtaggct ttcaacaaaa
      901 taacagaata atagatcact ttacaatttc aaagactgat acatcgaata ataatcagtc
      961 caataaactt tgaaaatttg actcaatatc aattattttt tatattaatt acctgaaaac
     1021 ctttttctaa tctatactgg tattgtatat gtgaaaaagg aaaaaataat aataaaaact
     1081 agcttaataa tacttttttg gttttttctg ttaatagcta tcacttattt tataaatgat
     1141 attttgatat tttcacaaca taataaatat gaggatcaaa aatctgtaaa ccaagaaaat
     1201 gttgctggtc ttcatatagt ggaagtaaaa tatcaggaag caagttttag tgatttcgat
     1261 atatttggaa taaaaaaaat ctatcctact aaaaaaagcg gttttgaatg gtttatgaat
     1321 aattatgatc cagaatcaga tccatatatg cataattata agagtattgt aaagaacgaa
     1381 gatgggagtt ataacatagg cgaaagatcc cgaatgggag tatattccaa agacggaata
     1441 ggttatccaa aaggaaatat ggaaacttat aactttacag agctctcaaa aaaaggctat
     1501 tggtataaac cttcagactg gaagaatgta gaaattactg gagagtattt atataaaaaa
     1561 ggcaaaggtc caggtataac tcattacgct cgatccgagg accattctac aataaataac
     1621 ggatgtggtg gatcaagcta taagcttaaa atccattttg atggaacgag tagtataagc
     1681 aaagaacaat cacatgcaaa accatggaaa atatctatga ataaaagtcc gtttggtaaa
     1741 cttgacaaag attggtttag atttaaaggt attatgtata atcttcctga tggtactgtg
     1801 aagctcgaaa actggttgga tcctttccta aataacacct ggataaaaat tgcagaatat
     1861 caggacaaag gaggatgggg taaagatggt aataaatgtc aaggcaaaga cgatcatata
     1921 attacgtggg gttctcccac tgcaactttt agatgggatg atgccttggt tgattttaga
     1981 aatttaagtg taagagaaat acagcctcga ataattcaag acttaatttc ctagcgttaa
     2041 gagtaataac aataatattt ttttaaattt ttctagacgt ccttaacatc cacaaatttt
     2101 tcatgctata cattataggt aggaagtaga ttaggtcgta tccttttctg atgttcagct
     2161 ctaatataga tagcagatga ttttcgaatt tgtttgttgt agttgttgta gttaattctt
     2221 cattttttat tactatgact gatccatgga tcaagattag gagataattt ttacaacata
     2281 ccaaaatgaa gtcatttatt agtttgatag gcactttgac agaggaagag tgacttgtct
     2341 atttgatttt tttttgtata gctgtatatt tctttaacat ttggaagtaa agaagataaa
     2401 aagaatatcc aattaatact taaagtattc gatatagaaa acgacaaatt gttacgccaa
     2461 tataatttaa aaaatttaga aattgtagta aagtttgaaa atggcgtacc tttttgctta
     2521 ttttgtaagg ctgatgattg tgtgcttata caagttttgc tatatgcgga aaacaaaatc
     2581 tttgctatac tgaataacat taattcgtag acctcatcag atattttaca atatccagat
     2641 tgaatcttgt aattctgtaa taatacaaaa ttgtatcttt tagaaaatca aacaatggat
     2701 aataagtaga aagtatataa tactt
//
LOCUS       DATIAS010000616         3220 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_931522, whole genome shotgun sequence.
ACCESSION   DATIAS010000616 DATIAS010000000
VERSION     DATIAS010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_931522"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(416..489)
                     /locus_tag="VLA74_12550"
     tRNA            complement(416..489)
                     /locus_tag="VLA74_12550"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(453..455),aa:Pro,seq:tgg)
     gene            complement(585..1478)
                     /gene="map"
                     /locus_tag="VLA74_12555"
     CDS             complement(585..1478)
                     /gene="map"
                     /locus_tag="VLA74_12555"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II methionyl aminopeptidase"
                     /protein_id="HSF51585.1"
                     /translation="MDFLECYRKAGKIASTVRENAREKNHIGSTMFKICEEIEIEIRK
                     KGAEPAFPVNVSLNEIAAHYTAEPNDPTPVKDGDILKIDIGVHVDGFIADTAVTVCYN
                     PEFDSLVRSSEIALNEALKIAKTGVKSSDIGKVIESSIIKGGFIPIKNLSGHSLEQYT
                     IHAGKSIPNIDTFGSFRLETNHIYAIEPFVTVKNGLGIVHEGKIANIFAIVSRKPTKE
                     KETDEFLNELWNRFRSLPFALRWLLDSHEEKKARELLEKLKKRKNVHAYPVLIEGKGM
                     IVAQSEHTIIPIENIVEVITA"
     gene            2155..2373
                     /locus_tag="VLA74_12560"
     CDS             2155..2373
                     /locus_tag="VLA74_12560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51586.1"
                     /translation="MTEDLEGTKERKFAIATLLMPDGKNYEIPLVRKTFSTGREGYYA
                     QIPSFVYADEVYGGQIQVWKKGGTKDKT"
     gene            2450..>3220
                     /locus_tag="VLA74_12565"
     CDS             2450..>3220
                     /locus_tag="VLA74_12565"
                     /inference="COORDINATES: protein motif:HMM:NF021646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51587.1"
                     /translation="MKRKNSKNSVRIIYVILDGIGDLPHESLDNLTPLAAAYTPNLDK
                     IASNGTMGQVITVGKGIAPQSDIAVFNMLGYNFRDIPYVGRGVVESIGCGLDFQKGDL
                     ALRGNFATVDNRLKIVDRRAGRIITDEEARSVCETLNKKISFQDPDASVVVVPTIAHR
                     VTIRFRHKKTKLSDQITNTDPAYDKVNGIGIAKTDIAHMHVLKSEPQNNDTSSRISAD
                     LINDFTNQVISLTKNHPINISRIQRNLNPMNCILVRDAG"
BASE COUNT         1047 a          524 c          495 g         1154 t
ORIGIN      
        1 atcaataaac ctgctttgta tggatattta aaataagaca tctcttaagt cttactctat
       61 ttcagtcgac ccacaagatg tgttaggttt tctttattgt acacggttga cggattcgag
      121 gaattccaaa gtaaaatcaa ttttttgttg ttataataat gtatgactta ttcacgtgtt
      181 ttaaattaag gactttaccg atcacaagtt tggtctaatc tttttctgct ttatacggta
      241 gtacttttac cacttttagc agaagcaaat ttgcattcat taggggagac atattaaaga
      301 tatggtatga gatcataatc actaattatt tgttactaag tattaggtgc atatactacg
      361 ttcttcatat tatttatcaa aaaaagttcg aatttgtttt ggtccaaaga atcaatgggg
      421 tcggccggat ttgaaccggc gaactccagc gcccaaggct ggcatcatac caagctagac
      481 aacgacccct tattttacaa ttaaataata tttttttagt atataatttt aagtttcgga
      541 agttttcttt taaactattg tagttttaaa attagactaa agaatcatgc agtaatgact
      601 tcaacgatat tctcaatagg tattatggtg tgttcagatt gggccactat cattccttta
      661 ccctctatta gaactgggta tgcatgaaca tttttccttt ttttcagttt ttccagtaac
      721 tctcttgctt tcttctcttc atgagaatca agtaaccacc tcaacgcaaa aggcaatgat
      781 ctaaatctat tccataattc gtttaagaac tcgtcagtct ccttctcttt tgtaggtttt
      841 cttgacacta ttgcaaaaat atttgcgatt tttccttcat gtactatccc taatccattc
      901 ttgacagtta caaagggctc tattgcatag atgtggttag tttctaatcg aaaagaacca
      961 aatgtgtcga tattgggaat tgatttacct gcatgaattg tgtattgttc taatgagtga
     1021 ccactcaagt tctttatagg tataaatcca ccttttataa tgctactttc gattaccttt
     1081 ccaatatcag acgatttaac accagttttg gctattttca acgcctcatt taatgcgatt
     1141 tctgaggatc ttaccaaaga atcaaattcc ggattgtaac aaacagttac agcagtatca
     1201 gctataaatc catcaacatg aacccctata tctattttta aaatgtcacc atcttttacc
     1261 ggagtgggat cgttgggttc tgccgtataa tgtgccgcaa tttcatttag actaacattg
     1321 actggaaatg cgggctctgc tccttttttc cttatttcta tttctatttc ttcacagatt
     1381 ttaaacatag ttgatccaat atggtttttc tccctagcgt tctccctaac tgtactcgct
     1441 atctttccag cttttctata gcattctaaa aaatccatct aattgatttc atatctgtaa
     1501 tatataaaat tgttttaaat cattcatttt ataaaattca ataacatgac atttaatcta
     1561 ctaaaatttg agactttggt attgttctat caagttattt ggggattaaa tatcaattac
     1621 ttttttgatt atcaccgaaa tccgattaga attcttttct taataaaatc attctagttt
     1681 actttattca attttactct ctctttatct tcgttcaatt taattaaaga tcagtataag
     1741 gaaatgtgtt tgtttggtgt gagtgaaaga taatattata gcacaaaaca aaaatacaat
     1801 aaaaattttc atttcacgat cgtaagatat tatattatat tatatttatc atttaaatag
     1861 agtagataaa aacggattta tgaaaggatc tagtcttcta tctttttatt actttaaaat
     1921 ttataaagat atataatttc gatgcattca acatttcgtg atccaaacaa tcctgaatat
     1981 taactatctt tgatacataa cttcaacgga gcaatcaaat cttctgatta caaattcatt
     2041 ttaaatctag taatcaacaa ttaattttct cgcatttttt acattaacta taacattaag
     2101 attcttctga ttaatattat ttttatattt cagcatgtca ataagataat tagtatgaca
     2161 gaagatctcg aaggtaccaa agaaagaaag ttcgctatcg cgactttatt gatgcctgat
     2221 ggaaaaaatt atgaaattcc cctagttaga aagactttta gtactggtag agaaggatat
     2281 tatgctcaaa ttccttcatt tgtatatgcc gatgaggttt atggaggaca aatacaagtt
     2341 tggaaaaaag gtgggacaaa agacaaaact taattttata taccttttta gctataattt
     2401 tattttttta ttaaataaaa ataaatttag ttaaaatatc tttttccttg tgaaaagaaa
     2461 aaatagcaag aattcagtta gaatcatcta cgtaattttg gatggaattg gcgatcttcc
     2521 acatgaatct cttgataact tgactccgct ggctgcagca tatactccta atctagataa
     2581 gattgcaagt aatggtacta tggggcaagt gattactgtg ggtaagggaa tagctcctca
     2641 atcagacata gcagtattta acatgttagg atataatttt agggatattc cttatgtcgg
     2701 gcgaggagtt gtagaatcta ttggatgtgg cttggatttt cagaaaggag atttagcatt
     2761 aagagggaat tttgcaacag ttgacaacag gttaaaaatt gtggataggc gtgcaggacg
     2821 tattataacg gacgaagaag ccagatcggt ctgtgaaaca cttaacaaaa aaatttcttt
     2881 tcaggatcca gatgcttccg ttgttgtcgt tcctaccatt gctcataggg ttaccataag
     2941 atttaggcat aaaaagacaa aactttctga tcaaataact aatactgatc ctgcctatga
     3001 taaagtaaat ggtatcggaa ttgcaaaaac agatattgca cacatgcatg ttctaaaatc
     3061 tgagccacaa aataatgata catcctcaag aatttcagca gatttgatta atgattttac
     3121 aaaccaagtt atttccttaa caaaaaacca tcccataaat atttctagaa tccaaagaaa
     3181 tttgaaccct atgaattgta ttttagtaag agatgcaggt
//
LOCUS       DATIAS010000617         2430 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_250823, whole genome shotgun sequence.
ACCESSION   DATIAS010000617 DATIAS010000000
VERSION     DATIAS010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250823"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VLA74_12570"
     CDS             <1..190
                     /locus_tag="VLA74_12570"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51588.1"
                     /translation="VWDNASYHISKITREYVNRQKEKEDWLTVIHLPKRAPYLNPNER
                     KVNQKINQMYVQTDSILV"
     gene            complement(211..783)
                     /locus_tag="VLA74_12575"
     CDS             complement(211..783)
                     /locus_tag="VLA74_12575"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSF51589.1"
                     /translation="MTHLSFPDLSGKLINLRELSMDDAITILNLMSYDISKYLYEVPY
                     PYKIDDALNFIKSSYEYFKLHKAITFGIEYKNTLESKLLLVGTISIKDIDYVNKKANI
                     GYWIGKQYQSKGIATECVELVVNYAFDILELEEISAYVFPDNNPSIRVLEKNGFIKTS
                     EVNEYHHISNKSSVITNVITPSSKSLIQIF"
     gene            1261..2262
                     /locus_tag="VLA74_12580"
     CDS             1261..2262
                     /locus_tag="VLA74_12580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51590.1"
                     /translation="MERVPVTEDNFIQILADYTEWKYEDEIKNSIDECTWDLEFESDE
                     FVYKQLLTWFIFERINPATGKTILDEFIDFVSKDSNNLLLVGKLRMMKNLIYDIFEIV
                     DRKGNIITLKGQSNQKKYKVEIISGYVERYAPGRFVMARIFPWGDYYRFAGITKIKIY
                     HNNKNFPKCIITQDMIEQIQDYFEKRFVKDAESIIISKRSTLHGMLNKLPYVWIDGIS
                     TSLFLNRRGKKKEKVKRIVEILVNSQHLNDLVNSFPKDARTALLLIKEKGGIVKYREI
                     VKKYSDDTKFNWEKEPPISPIGLLRRHGLVIVGRMLIGNRFYKVILIPNEILQRLTI"
BASE COUNT          918 a          334 c          390 g          788 t
ORIGIN      
        1 tgtctgggac aacgcatcat atcatataag caaaattaca agagaatatg taaatagaca
       61 gaaagaaaaa gaagactggc tcactgtaat acatcttcca aagagggctc catacctgaa
      121 tccaaatgaa agaaaagtaa accagaagat aaatcagatg tatgtgcaaa cagattctat
      181 actagtatag aataacaaaa agatgcaata tcagaatatc tggataagag atttggaaga
      241 tggtgtaatg acatttgtga tgacacttga cttatttgat atatgatgat attcgtttac
      301 ctcactcgtc ttaatgaacc catttttttc caaaactctt atagatggat tgttatcagg
      361 aaaaacataa gctgaaattt cttctaattc caatatatca aatgcatagt taaccactag
      421 ttcaacacat tctgttgcta tgcctttact ttgatattgt ttaccaatcc aatatcctat
      481 atttgctttt ttgttaacat aatcaatatc tttaatactt atagttccaa ctagtaacag
      541 ctttgattct aatgtatttt tgtattctat accaaaagtt attgctttat gtagtttaaa
      601 atattcataa ctagatttaa taaaattcaa agcatcatct attttgtaag gatatggaac
      661 ttcataaaga tatttagata tgtcataact catgagattt aatatagtta tagcatcatc
      721 cattgaaagt tctcttaaat tgattaattt gccagataag tctgggaaag ataaatgagt
      781 catttgtatt tgttttattc aatcataaag tattatattt aactaacttc tactttattg
      841 caaattaata tattaaattt agtatacatg ttattaaagc tcaaatatgt taaaaatatg
      901 tttccaataa taaaatctaa atacaaggta gtagaaccct actacatgga aggctctact
      961 cccaacgggc ccgtagtttt ctagggctca cattatatag tcataagttt gtataagggt
     1021 tcagaaagaa agaaagaatt gttgtacaac tttgcttcta tatatttaga attgggttta
     1081 aaatatctgt ttttaggaag attctgggag aaagaggaag aaaaaaactt ttacattgta
     1141 tttaagtaga taaaatacaa ctatgtttac aacaacttct taatttcttt atcattactt
     1201 aacgttagag aaatattatt aacgtcttta tcaatatatt caagaggtgt tctggttatt
     1261 atggaaagag taccagttac tgaagacaac tttatacaaa tccttgctga ctatactgaa
     1321 tggaagtatg aagatgagat caaaaattca atagatgaat gcacatggga tcttgaattt
     1381 gaaagtgacg agtttgtcta taaacaacta ttaacatggt ttatctttga gagaataaat
     1441 cctgctactg gaaaaacaat acttgatgaa tttatagact ttgtttctaa ggattccaat
     1501 aatcttcttc tggtgggtaa attaagaatg atgaaaaatc taatatatga tatattcgaa
     1561 attgtagata gaaaaggcaa cataattact cttaagggtc aatcaaatca gaaaaaatac
     1621 aaggtagaga tcatttctgg gtatgtagaa agatatgcac cagggagatt tgtgatggca
     1681 aggatctttc catggggaga ttactacagg ttcgccggaa taaccaagat aaagatatac
     1741 cacaataata aaaattttcc taaatgtatt ataacacaag atatgataga gcagatccaa
     1801 gattattttg aaaaaagatt tgttaaagat gcagagtcaa taattataag caagagatca
     1861 actttacatg gaatgctcaa taagttacca tatgtgtgga tagatggaat atctacttca
     1921 ttgtttttaa acagacgagg taagaaaaaa gagaaagtaa agagaattgt tgagatactt
     1981 gtcaattctc aacacttaaa tgatttggtc aattcctttc caaaagacgc ccgaacagct
     2041 cttttactaa ttaaggaaaa aggaggtata gttaagtaca gagagattgt aaagaaatac
     2101 agtgatgata caaaatttaa ctgggaaaaa gaaccaccca tttcacctat aggattactt
     2161 cgcagacacg gcttggtaat cgtaggaaga atgttaatcg gcaatagatt ctataaagta
     2221 attctaatcc caaatgaaat attgcaaagg cttactatct aaagatagat agatcgtatt
     2281 gcaacatggt ttaaaacttt tgtataattt caataactgc ctactagtaa gattattgat
     2341 atatagcaaa ttccgtgaaa gatgttaagt caagtgtcat cacaaatgtc attaaccatc
     2401 ttccaaatct cttatcaaga tattctgata
//
LOCUS       DATIAS010000618         2051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1885531, whole genome shotgun sequence.
ACCESSION   DATIAS010000618 DATIAS010000000
VERSION     DATIAS010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1885531"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VLA74_12585"
     CDS             complement(<1..544)
                     /locus_tag="VLA74_12585"
                     /inference="COORDINATES: protein motif:HMM:NF020050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSF51591.1"
                     /translation="MFVQFGQHFRYKSSLDNNNVQYGNRYYLVICREIMLDRVDKIIL
                     THLGKNARLSSQELRKILQATGHTITDRGVRHRIQKLEKNNIILGYSAILNPNIISEK
                     INHTVLLKFKYGKSSQQKIKQLTDYVNQSSFCLYSNRLSGDYDWICNFIFDSVEQYEL
                     ESDNFVNRFSSLISDFRSYES"
     gene            597..1508
                     /locus_tag="VLA74_12590"
     CDS             597..1508
                     /locus_tag="VLA74_12590"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51592.1"
                     /translation="MNKYQTKYMTEYKTVKINSLDIFYREAGPKNAPTILLLHGFPTS
                     SHMFRNLIQKLSDEFHIVAPDYPGYGNSSMPSVDEFDYTFENMAKIIFKFVETIGLGK
                     YSLYMMDYGAPIGFRLFSMQPEKVQAFIIQNGNAYDEGLGEFWNPIKDWWNNKTDENE
                     KKLHYLVTEETTKWQYINGTRNPQLISPDNWIIDQAGLNRPGNVAIQLAMLYDYKTNP
                     PLYSQWQKNFGKYQPPTLIVWGKNDYIFPESGAHPYKRDLKDVETYILDTGHFALEED
                     CDVIAEKISRFFSARLEIKAEVKATEA"
BASE COUNT          750 a          305 c          314 g          682 t
ORIGIN      
        1 tagattcata tgatctaaaa tctgaaatca atgaagaaaa tctatttaca aaattatcag
       61 attccaattc atattgttca actgaatcaa atataaaatt acaaatccaa tcataatcac
      121 cacttaatct gttggaatat aaacaaaatg atgattggtt cacataatca gttaattgtt
      181 tgattttttg ctgtgatgac tttccatatt tgaatttcag tagaacagta tggttaattt
      241 tttctgagat tatgtttgga tttagaattg ccgaatatcc taaaattatg ttattttttt
      301 ctaatttttg tattctatgt cttactcctc tgtctgtaat agtatgtcca gtagcttgaa
      361 gaatttttcg tagttcttgt gatgatagtc tggcattttt tcctagatga gttaagataa
      421 ttttgtctac tctatcaagc ataatttctc tacaaataac aagataatat ctatttccat
      481 attggacatt attattatct aacgatgatt tatacctaaa atgctgtcca aattggacaa
      541 acattcaaaa aaatatttcc agcataccta tatgtttttt ctaatataat atacttatga
      601 ataaatacca aaccaaatac atgacagaat acaaaactgt caaaataaat agcctcgata
      661 ttttttacag agaagcaggt ccaaagaatg caccaacaat tttgttgttg catggctttc
      721 caacatcatc acacatgttt cggaatctaa tacaaaaact gtctgatgaa ttccacattg
      781 tagcaccaga ctatccagga tatggaaaca gctcaatgcc atcagttgat gagtttgatt
      841 atacttttga aaatatggcc aaaattattt ttaagtttgt agaaacaatt ggattgggaa
      901 aatacagtct ttatatgatg gattatggtg caccaattgg attcagacta ttttcaatgc
      961 agccagaaaa agtacaggca tttattatac aaaatggaaa tgcatatgat gaaggtctag
     1021 gagaattttg gaatcccata aaagattggt ggaataataa aactgacgaa aatgaaaaga
     1081 aacttcacta tctggtgaca gaagagacaa caaagtggca atatattaac ggaacaagaa
     1141 atcctcaatt aatcagtcct gacaattgga taatagatca ggcgggattg aaccgtcctg
     1201 gaaatgttgc aattcaacta gctatgcttt atgattataa gactaatcca cctctatatt
     1261 cacaatggca aaaaaatttt ggaaaatatc agcctcctac cttaattgta tggggtaaaa
     1321 atgactatat cttcccagaa tcgggagcac atccatacaa aagagaccta aaagatgtag
     1381 agacatacat tcttgatacc ggtcactttg ctttagaaga agattgtgac gtaattgctg
     1441 agaagatttc tagattcttt tctgccagac tagaaataaa agcagaagtt aaggctactg
     1501 aagcataata tgcaattcga tgtcaaagat catatcccac tggtccattg aactctgggt
     1561 tccaatccta ctttttatag aattcatgga ccaataataa tgatattatc taaaaattaa
     1621 tctttacttt ttgtgatcat ttatttataa atcaatcaag ataaagcaga attttgaaat
     1681 ctaatagtga gattgacact atttgtaaaa gattgaaatg attctgtgga ctttgaaccc
     1741 ttaaacatca tttgttttat agttggtata ggaatggatt attatgatca aaatagtctt
     1801 atttgcaaat attactgaaa tgtcttatat ctaatttcat aaatgaagga aaaaagatat
     1861 tcaataattt acgaaatata attatttccg aatcggaata tttgtataat caaaaaatag
     1921 aataactata gatttgcttg ttggacgaaa ttgataaagt tatccttcat gaacttggaa
     1981 aaaatgctcg aatttccgca tatcagatag cgcatattct tcatgaaatg gattacaaaa
     2041 taacagatcg a
//
LOCUS       DATIAS010000619         2139 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1476219, whole genome shotgun sequence.
ACCESSION   DATIAS010000619 DATIAS010000000
VERSION     DATIAS010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1476219"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..649
                     /locus_tag="VLA74_12595"
     CDS             125..649
                     /locus_tag="VLA74_12595"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HSF51593.1"
                     /translation="MTSLITCIFLFYGGLNAAFSASGDKFSASLDGAQEIPPVTTEGT
                     GLASLQMQDNTITYQVNVVNTDKINGIHIHKGTSGENGEVLVSLYTRDTDGNDISSLP
                     KKIAPKIDVASTVQRSSQFSSSGNFHASDLQGSLEGKTLENLISLMQSGETYVNVHTT
                     SYPDGEIRGQISSK"
     gene            682..1530
                     /locus_tag="VLA74_12600"
     CDS             682..1530
                     /locus_tag="VLA74_12600"
                     /inference="COORDINATES: protein motif:HMM:NF016362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP cone domain-containing protein"
                     /protein_id="HSF51594.1"
                     /translation="MYNTLGNEGLRVEESVQLTKSDGRKVLFDFDKIISTCIRAGASR
                     NLAEEIAQKVFEQSYDGMTTKEVYKKILRFLKDQHYPKIQNRYRLRESIMSLGPTGFI
                     FESFVGQILEKHGYRIESIRSKVKGQCVEHEIDLIAHSSKNNRYMIECKYHNIAGIFT
                     GLKETLYTHARFLDLKEEFDREMLVSNTQISGDAIQYAKCVGQDVLSWRYPKDNGLEK
                     MIEDQGLYPVTLLHLSKNELDAFSKINFLLARNLLNVNLDELSKKTGISTNRLTTLQS
                     KINQIL"
     gene            complement(1828..>2139)
                     /locus_tag="VLA74_12605"
     CDS             complement(1828..>2139)
                     /locus_tag="VLA74_12605"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSF51595.1"
                     /translation="GLVFYIRNTDLESIKEVLQKNNVEGISYFEIVGRGKLERGEVEK
                     IIDGYRSGKKFVPEFVTRKRVEVVIPDSEVDKILNEVKKSGNIHGKLFIYDVPQSYDL
                     P"
BASE COUNT          768 a          323 c          349 g          699 t
ORIGIN      
        1 agatttgttt tatggataaa acctatataa gattatttat aaaaattttg tgaaattgtt
       61 tataataaat gttgtatata atcaattagt ataaacgatg taccaaaaaa atttattgtt
      121 aattatgact agcttaatta cttgtatatt tttgttctat ggaggattaa atgcggcttt
      181 ctcagcatct ggtgataaat ttagtgcaag tctggatgga gcacaagaaa taccacctgt
      241 aactactgaa ggaacaggtc ttgcttcttt gcaaatgcaa gataatacta taacatatca
      301 ggtaaacgtc gttaataccg ataaaataaa tggaattcat atccataaag gaacaagtgg
      361 agaaaatgga gaggtactag tcagtttgta tacccgagat acagatggca atgatatctc
      421 atctttacct aagaagatcg ctccaaaaat tgatgttgca tcaactgttc aacgatccag
      481 tcaattctca tcaagtggga acttccacgc ttctgatctg caaggctctc tagaaggaaa
      541 aacgttagaa aatctaattt ctctgatgca aagtggagaa acatatgtta atgtacatac
      601 aacaagttat cctgatggtg agatcagagg acaaatatcc agcaagtaga tcgaaattaa
      661 atatatctct gccaaagtgt tgtgtataat accttgggaa atgaaggatt aagagttgag
      721 gaatctgttc aattaactaa aagtgatggt aggaaagtct tatttgattt tgataaaata
      781 atatccacat gtataagagc cggtgccagt agaaatctag ctgaagagat tgcacaaaaa
      841 gtatttgaac aatcttatga cggcatgact acaaaagagg tatataaaaa aatacttcga
      901 tttctaaaag atcaacatta tccaaagata caaaataggt atagactacg cgaatcaata
      961 atgtcccttg gtcctaccgg ctttattttc gaatcctttg ttggtcagat tcttgaaaaa
     1021 cacggatata ggattgagtc tataagatcc aaagtcaaag gtcaatgtgt agaacacgaa
     1081 attgatctaa ttgcacattc ttcaaaaaat aaccgatata tgatagaatg caagtatcat
     1141 aacattgccg gaatatttac tggtctaaaa gagacactat acactcacgc aaggtttctt
     1201 gatctaaaag aggagttcga tcgagagatg cttgtgagta atacccagat ttctggagat
     1261 gctatccaat atgcaaaatg tgttggacaa gatgtattat cgtggcgata tccaaaagat
     1321 aatggattag agaagatgat tgaagatcaa ggactttatc cagtaactct tttacattta
     1381 agtaaaaatg agttagatgc cttctcaaaa attaatttct tattagcaag aaatcttctc
     1441 aatgtaaatc ttgatgaatt atctaaaaag acaggaattt caacgaaccg attaaccaca
     1501 cttcaaagta agattaatca gattctgtag atttattgaa ttattgtttt ttatatcaac
     1561 taatgtgaaa gtattattta actgtcaatt gtttcatgtg tttaattgat tatctattgg
     1621 tctcaaatta taataagatg atgaaaacaa acatgccata tgaagttgat aattatggat
     1681 gatgatgtaa ataaattcaa ccgaattcac caaaaataaa ttagctttca tttttagagt
     1741 ttttttattg cacatatata tattctaaaa tattagtcga catctactaa atatacaaag
     1801 atagactatt ttgattgatc agtcaagtta tggtaaatca tatgattgtg ggacatcata
     1861 gataaatagc ttgccatgga tattaccaga tttttttacc tcatttaata ttttatctac
     1921 ttcagaatca ggaataacga cttctaccct ttttctcgtt acgaattcag gaacaaactt
     1981 tttcccagat ctatatccat ctattatttt ctctacctct cctctttcta attttcctcg
     2041 tcctactatt tcaaaatagg atattccctc gacattattt ttttgtaaaa cttctttaat
     2101 agattcaaga tccgtattac ggatatagaa gactaatcc
//
LOCUS       DATIAS010000620         2158 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_114123, whole genome shotgun sequence.
ACCESSION   DATIAS010000620 DATIAS010000000
VERSION     DATIAS010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114123"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VLA74_12610"
     CDS             <1..540
                     /locus_tag="VLA74_12610"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HSF51596.1"
                     /translation="LIPVLQKVGDLWEKGELDVATEHACSNAASNLISILNNKFHSLD
                     TEKKKPIKVILCTPEGEIHKIGCEILESLLLEKKYHVYNISPSAPNESIVEYVIETSP
                     NLIIICLTLSEHKNTTIRLINELNKKYPTNIVIAGAGVIALKEDKTIENQNKQNKISI
                     LHNESISNFIRHINEYINV"
     gene            complement(818..>2158)
                     /locus_tag="VLA74_12615"
     CDS             complement(818..>2158)
                     /locus_tag="VLA74_12615"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HSF51597.1"
                     /translation="ILVTGATGFIGSRLTRRLIASGKYHIRCMARNPDEIYQKIFGLS
                     ENIIEIVRADATKYEEVLKALEDMDVVFYLIHSMEGTSSKWKEFSYKDRLIAENFAKA
                     ASEKRVKRIIYLGGLINEINNLSEHMRSRKEVGEILKKSTAKVTVFRAAIILGPEGGS
                     FLMLKYLVERLPIMVCPKWVETRSQPIAVDDVVNYLVNCLEVSETEGKEFDIGGPEIV
                     TYFELMKRYAKTVNKSLRILVIPFLTPRLSSYWIDLVTPVKASLARPLIDSLKHEATV
                     KDGQIRKLIPFDLSNIEQAMKTSKKESEIKSKILKINEKSSISLNNKILIISLLVLAA
                     IGSTYYFLDARQDVFRPYWMVLSCLWYFGIFSSIYFVRYGARLGSLIAGILGWITVTF
                     WLLDNIRLVYDIAIMTSSPPDLIMTIRNFLGIVISISVILSSHNVFHKIRLYKI"
BASE COUNT          757 a          358 c          318 g          725 t
ORIGIN      
        1 ctaattccgg tactgcaaaa ggtaggggac ttgtgggaga agggagaatt agatgtagcc
       61 acggaacacg cttgcagtaa cgcagcttcg aacctaataa gtatattaaa taacaagttt
      121 catagtttgg acacagaaaa gaaaaaaccg ataaaggtga ttttatgtac tccagagggc
      181 gaaatacaca agattggatg tgagatactt gaatcgttat tattagaaaa aaaatatcac
      241 gtatataata tatctccatc agcaccaaac gaatcaatag ttgaatatgt aattgaaaca
      301 agtcctaatt taataataat atgcttaaca ttatcagaac ataaaaatac cacgataaga
      361 ctaataaatg aattaaataa aaaatatcca actaacattg taattgctgg agcaggggtt
      421 attgcattga aagaggacaa gacgatagaa aatcaaaaca aacagaacaa aattagtatt
      481 ttgcataacg aatcaataag taattttata cgccatatta atgaatacat aaatgtttaa
      541 ttttaactct acgtactcaa tttgattttt taaaatatca atttcttgtg tttagtttca
      601 aatttgcctt cggttataat ataaaactat aaaatttctt attcaaataa atgaggttcc
      661 cacggttctt aatctaattt aatatgataa ttgaaattac gttaatatta acaaaatatt
      721 tcttttaata aatatatgga tagtggtaat tttaatatag tgaaaatgga aaagatattt
      781 tgaagagatt taattttcat attgttagat caaatcatca gattttatat aatcttatct
      841 tgtgaaagac attatgagaa gataatatta ctgaaataga tatcacaatc cctagaaaat
      901 tcctaatagt cattataaga tctggtggtg atgaagtcat aatagcgata tcatatacca
      961 agcgaatgtt atctaatagc caaaatgtta ctgtgatcca tcctaaaatg cctgcaatga
     1021 gggatccgag tctcgcacca tatctaacaa aataaattga agagaatatt ccaaaatacc
     1081 acaaacaact tagaaccatc caatatggcc gaaaaacatc ttgtcgtgca tctaaaaaat
     1141 aatatgttga accaattgct gctagtacta aaagcgatat aattagtatt ttgttgttca
     1201 atgaaatgga acttttttca tttattttta gaatttttga tttgatttcc gattcttttt
     1261 tagacgtttt catggcttgc tcaatattag aaagatcaaa tggtattagt ttcctgattt
     1321 gtccatcctt aactgtggct tcatgtttca aactatcaat caatggtctt gctaaggagg
     1381 ccttaactgg cgtgacgagg tctatccaat aagaagacaa tcttggagtt aaaaaaggga
     1441 tgactagtat ccttaatgat ttattgaccg tctttgcata tcttttcatt agctcaaaat
     1501 atgtgactat ttctggccca ccaatatcaa actcttttcc ctctgtttct gaaacctcca
     1561 aacaattcac aagatagttt acgacatcat caactgctat tggctgtgat ctagtctcaa
     1621 cccacttagg acacaccata atagggagtc tttctacaag atactttagc atcagaaacg
     1681 atcctccttc tggtcctaaa attattgcgg cacggaacac tgtaactttg gctgtagatt
     1741 ttttgagaat ttctccaact tccttcctgc ttcgcatatg ttcggaaaga ttattaattt
     1801 cattaattag acctcctaaa tatattattc tttttactct tttttctgag gcagctttag
     1861 caaaattttc agctattaat ctatctttgt acgagaattc tttccatttt gaagatgtac
     1921 cttccataga atgaattaaa taaaaaacca cgtccatatc ttctaaggcc tttaatactt
     1981 cttcatattt ggtagcatct gctctaacta tctcaataat attttcactt aacccaaata
     2041 ttttttggta tatttcatct ggatttctag ccatgcaacg aatatgatat ttacccgagg
     2101 caattaatcg tctagtaagt cttgacccta taaacccagt tgctcctgtt actaaaat
//
LOCUS       DATIAS010000621         2301 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1476257, whole genome shotgun sequence.
ACCESSION   DATIAS010000621 DATIAS010000000
VERSION     DATIAS010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1476257"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..412)
                     /locus_tag="VLA74_12620"
     CDS             complement(251..412)
                     /locus_tag="VLA74_12620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51598.1"
                     /translation="MSDNDDVSKKVVDYDINENQFVIEYTAIFEDGTSDSYIENKVIK
                     TAAERLLFG"
     gene            complement(903..1544)
                     /locus_tag="VLA74_12625"
     CDS             complement(903..1544)
                     /locus_tag="VLA74_12625"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HSF51599.1"
                     /translation="MESTSTTQIPAWHLKADYIETCNCDYGCPCNFDAFPTYGFCRAL
                     VLYHIREGNYGDVKLDSLDVVGAYSWPKAIHEGNGTMQLYITKNALEDNNVKHALVDI
                     FSGNAKGEGPFALFAGTFKYFLEPQFVNINVKIDGKKSSFSVPDIMDVQVESFINPVT
                     GEEQDTKIQLPKGFIWKLAEAAKTKIMRITTPSLNFDDSGKNAFYSVVEYRGP"
     gene            complement(1631..>2301)
                     /locus_tag="VLA74_12630"
     CDS             complement(1631..>2301)
                     /locus_tag="VLA74_12630"
                     /inference="COORDINATES: protein motif:HMM:NF039346.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51600.1"
                     /translation="TFNQFLINDKKPMLIHTGPIGMYKNIEQKIKEVIPLQKLAYVSF
                     LHFESDEWGGMEFLESANAKLVCSDLSSKLNLMRWYNVPLDHISVWDNDILKTGKMHF
                     KFIMTPHVHHWDSMMIFEENTKSLFTSDLFIQPGNNKPVIAEDISESMINLYRFTGIF
                     VTEKPVRDTTKRLKDLSPNMVYPMHGSCIDKSLFSKYTEAIMKNDFAYSGNLLGQKLE
                     NTIS"
BASE COUNT          802 a          377 c          274 g          848 t
ORIGIN      
        1 agtaataaca gaaccttatt atataaagat tctaatacct aaggcttgta cacttcttgg
       61 attatacttt aacagtaaat ctgaattata aattataaaa taaattttaa ttgtatcctc
      121 aaagatagtt cttattctct cttttggtgc taagctttaa atccaaagtc tcaaatatca
      181 ttttttattg atataaatta actattgttt gatttttctt ttttagattt ttcttccttt
      241 ttgatattct ctacccaaat agaagccttt ctgctgctgt ttttattact ttattttcaa
      301 tataagaatc agaagttcca tcttcaaata tagcagtata ttctattaca aattgatttt
      361 catttatatc ataatcaaca actttttttg aaacatcatc attgtctgac aaatgcagaa
      421 gtacaaatta ttctaaaata aatttgcttc tttactgcta ttaaccaaaa accaataagt
      481 ttttaaatgg agctgctttt actattgacg ctacaaacaa tagacggatt tttgcataac
      541 ctggtgttat tgtagcctct gacacccaaa aatcgacaaa tcttttattg taccttctct
      601 tgttataata tacctaaatc aaatcaaaac ttgagcaatt catcttagta gtgagtgtta
      661 acaaagtaac taggcaaatc tatctataac atccactttt taatatccat ttacaacatc
      721 tgccgattca acaaaccaaa aattttataa aataaaaaag cacaactata aattaaatat
      781 tttttgaatt agataaacaa aaaatgaatt tagcaaattt actattctaa tgaatataat
      841 aaaataacaa agtgctgata gatttgaaat ccaaagatag agattaatta ttatttctac
      901 agttatggtc ctctatactc tacaactgaa taaaatgcat tctttccaga gtcatcaaag
      961 tttaaacttg gagtagtaat acgcattatt tttgtttttg ctgcttctgc aagtttccaa
     1021 ataaatcctt ttggtagttg tatctttgta tcctgttctt cgccagttac aggatttata
     1081 aaactttcta cttgtacatc cattatatca ggaacagaga aactactttt ctttccatct
     1141 atcttgacat tgatatttac aaattggggt tcaagaaaat atttaaatgt ccctgcaaag
     1201 agagcaaaag ggccttctcc tttagcatta cctgaaaata tatccactaa tgcatgtttt
     1261 acattattat cttctaatgc atttttagta atataaagtt gcattgtgcc atttccttca
     1321 tgtattgcct taggccaaga atatgcacca acgacgtcca gactatctaa ttttacatct
     1381 ccataatttc cttctcttat atgatataat actaaagctc tacaaaagcc ataagtagga
     1441 aaagcatcaa aattacatgg acagccataa tcacaattgc atgtttcaat ataatcagct
     1501 tttaaatgcc aagcaggaat ctgtgtggta gatgtggatt ccattaacaa taactaatta
     1561 tttgtttgta taaaagaata tcttaataga gtgaaattat gcgattattg atattcaaaa
     1621 aaagattcat ttaagaaata gtattttcta atttctgacc taataaatta ccagagtaag
     1681 caaaatcatt tttcattatg gcctcagtat actttgaaaa taaagacttg tcaatacatg
     1741 aaccatgcat aggatatacc atatttggag ataaatcttt aagtctttta gttgtatctc
     1801 ttacaggctt ctcagtgaca aagattccag taaatctgta aagattaatc attgattctg
     1861 aaatatcttc agctataaca ggtttgttgt ttccaggttg aataaataaa tcagaagtaa
     1921 atagtgactt tgtattttcc tcaaatatca tcatactatc ccaatgatgt acatgtggtg
     1981 tcatgataaa tttgaagtgc attttaccag tctttagaat atcgttatcc catactgata
     2041 tatggtctaa aggaacatta taccatctca tcaaatttaa ttttgaactc aaatcactac
     2101 atactaattt tgcattagcc gattctaaaa attccattcc tccccattca tcactttcaa
     2161 aatgcaaaaa tgatacgtac gctaattttt gcaaaggaat aacctctttt attttttgtt
     2221 ctatattttt atacatccct atagggccag tatgaattaa cattggtttt ttatcattaa
     2281 tcaaaaattg attaaatgtt a
//
LOCUS       DATIAS010000622         2956 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_795348, whole genome shotgun sequence.
ACCESSION   DATIAS010000622 DATIAS010000000
VERSION     DATIAS010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795348"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..908)
                     /locus_tag="VLA74_12635"
     CDS             complement(<1..908)
                     /locus_tag="VLA74_12635"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HSF51601.1"
                     /translation="MIYNKGNIKIIINQLADFWFYIIGVNVIPFDTQKRIPVIYHYDE
                     YQNEPIPIEIYEQWKREGKFEKGIAIILGKVYRGNNIGQYLIGIDIDREKGLREFLTK
                     NNRHAELEKFAEKTIVEQHKDELYRAHIYFYSPIPFPQKTPDSILGIEVKSRGEHGIM
                     FVSPSVHKNGFNYEIIGNAKEPLHLSSQQAIELMRHLDNICVKHGIKYLEKEKNRILT
                     EPLKKIIKALKVDPEFQHIIHEGQRHMTMLSFADSLLIHHHKNKQIKEKLKTFFLKVN
                     DNVCLPPLLENEINSIWKSAVEFVDD"
     gene            complement(936..1127)
                     /locus_tag="VLA74_12640"
     CDS             complement(936..1127)
                     /locus_tag="VLA74_12640"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HSF51602.1"
                     /translation="MVHLHNQTKSNQTEIRKLQGIHGNSTYTIVLPKDFISILNLSKG
                     DYLKCRVSNQQLIIEKAEV"
     gene            complement(1383..2306)
                     /locus_tag="VLA74_12645"
     CDS             complement(1383..2306)
                     /locus_tag="VLA74_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51603.1"
                     /translation="MSEISIHWKKITRGLPKSRKYADDRAPTIEEIQQLCKYPDRRIK
                     GIMYTMASSGIRLGAWDYLHWKDIQPIELQGKVVAAKIIVYAGDDEEYFSFITPEAYY
                     ELQKWMQYRQDSGEEIHENSWVMRQLWDTKKGYYHHGTIKNPEKLKSSGLKRLMEDAL
                     WTQGIRKKSNLKRNRYEFQTDHGFRMWFKTRCEISGMKSINIEILMGHSIGISDSYYK
                     ITQDELLMEYLKASDFLLVSNENQLQKQYNKIQIQNQNDFKFIEGKLFEKESEIETLN
                     RNDQNKSDAIAALADKIDELVLEIERLKKEK"
     gene            complement(2330..2518)
                     /locus_tag="VLA74_12650"
     CDS             complement(2330..2518)
                     /locus_tag="VLA74_12650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51604.1"
                     /translation="MKIFFNYINLLPNGNLEEQCNLFAATGLEDQRWAFNNIIKFLQY
                     QKERVEKSEITGRPLVIL"
     gene            complement(2682..2756)
                     /locus_tag="VLA74_12655"
     tRNA            complement(2682..2756)
                     /locus_tag="VLA74_12655"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2719..2721),aa:Arg,seq:gcg)
BASE COUNT          861 a          476 c          373 g         1246 t
ORIGIN      
        1 aaatcatcaa caaattccac tgcacttttc catatgctat ttatttcatt ttctagtaat
       61 ggtggcaaac atacattatc attgactttt aaaaagaaag ttttcaattt ttctttaatt
      121 tgtttattct tatgatgatg aattaataat gaatctgcga aagatagcat tgtcatgtgt
      181 ctttgacctt catgaataat atgttggaat tctgggtcta cctttaaggc cttaattatt
      241 tttttaagtg gttcagttaa tattctattt ttctcttttt caagatactt tattccatgc
      301 ttgacacata tattatcaag atgtctcatt aattcaattg cttgctgtga acttagatgc
      361 agaggttctt ttgcattacc aattatttca tagttaaaac catttttatg gactgaagga
      421 gagacaaaca ttataccatg ttctcctcta ctttttacct ctattcctaa gatagaatct
      481 ggagtttttt gaggaaatgg tattggtgaa tagaaataga tgtgcgctcg gtataattca
      541 tctttatgtt gctcaacaat agttttttca gcaaatttct caagttcagc atgtctatta
      601 ttttttgtaa gaaattctct tagtcctttc tctctatcta tatctatacc aattaaatat
      661 tgacctatat tattcccacg atatactttg cctaaaatta ttgctattcc cttttcaaat
      721 ttgccttctc ttttccattg ttcatagatt tctattggaa ttggctcatt ttgatattca
      781 tcataatgat aaataacagg gatccgtttt tgagtatcaa aaggtataac atttactcct
      841 attatgtaga accaaaagtc ggctaattga ttaataataa tctttatatt tcctttattg
      901 taaatcatat ttatacacac taactctttt ttttgttaaa cttctgcttt ttctatgatt
      961 agttgctgat tagaaactct acattttaga tagtctccct ttgaaagatt caagattgaa
     1021 ataaagtcct ttgggagaac tatagtgtat gttgaatttc catgaatgcc ttgcaatttt
     1081 cttatttcag tttgattaga tttggtttga ttatgtagat gtaccatata ataataattg
     1141 tatgtactat acaagagaac tataatatta atattcttaa aagaggaaat tataactaat
     1201 tgaataaaat ttgtaattct gaagatacat aatcattttt tctattattt tgaattgcta
     1261 catttctaat ttatttttta tttttatttt ttcaatatta tagttcagca gtaaccattc
     1321 attcatttat taaccaaatt ataaaattac tataaagaga aattgaagat aaattcaatt
     1381 atctattttt ctttttttaa tcgttcaatt tctaatacca attcatcaat tttatctgct
     1441 aatgctgcaa tagcatcaga tttattttgg tcattacgat ttaatgtttc tatttcactc
     1501 tctttttcaa ataatttgcc ttctataaat ttaaagtcat tttgattttg tatttgtatc
     1561 ttgttatatt gtttttgtaa ttgattttca ttgcttacca acaaaaaatc tgatgctttc
     1621 aaatattcca ttaatagttc atcttgtgtt attttgtaat acgaatcgga aattcctatt
     1681 gaatgaccca tcaatatttc tatgttaatg cttttcattc cagagatttc gcatcttgtc
     1741 ttgaaccaca ttctaaatcc atggtctgtc tgaaattcat atctatttct ttttaagtta
     1801 gatttttttc taataccttg cgtccataga gcatcttcca tcaatcgctt aaggccagaa
     1861 gatttgagtt tttctggatt ttttatagtt ccatgatgat aataaccttt ttttgtatcc
     1921 cataattgtc tcattaccca actattttca tgaatttctt caccactatc ttgcctatac
     1981 tgcatccatt tttggagttc atagtatgct tccggagtga taaatgaaaa atattcctcg
     2041 tcatcaccag cataaactat aatttttgct gctactactt tgccttgtag ttctattggt
     2101 tgaatatctt tccagtgtag gtagtcccat gctcctaatc taattcctga agaggccatt
     2161 gtatacataa ttcccttgat tcgtctatct ggatatttac aaagttgttg tatttcttct
     2221 attgttggtg ctctatcatc agcatatttt cttgattttg gaagtcctct agttattttt
     2281 ttccagtgga tagaaatctc agacatttcg caaaataact ttattgtttt tataaaatta
     2341 caagaggtct tcctgtaatt tctgactttt ctactctttc cttttgatat tgtagaaatt
     2401 ttataatatt attgaatgcc catctctgat cttccaatcc tgttgccgca aaaagattac
     2461 attgttcttc taaatttcca tttggaagta aatttatata attaaagaat attttcattc
     2521 gtcttaaata acaatcttta gtaactggag atctaaatgc atataaaaat aaagaatatg
     2581 cagtagattc ttcaatgttt tggtctattt gttgtatttc tatttttgat tcacctattt
     2641 tttatttttg agtgaatcca attagagaac taatatcgca ctgggctcag agggatttga
     2701 acccacgacc aactgctccg caggcagcca ttctatccaa actgaactat gagcccacga
     2761 atattatcta aatacgtgaa ttataaattt tacattctca tccgttattg tatttcattt
     2821 ctttgatccc agcactttct gcaaagttgt cctgatatat tccattttgg ttttgggtta
     2881 tatctaatga atttcaaatt agttccacaa atagagcagt aatttctttc tttttcaaat
     2941 tctttgtctt tttttt
//
LOCUS       DATIAS010000623         2056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_114852, whole genome shotgun sequence.
ACCESSION   DATIAS010000623 DATIAS010000000
VERSION     DATIAS010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114852"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..773)
                     /locus_tag="VLA74_12660"
     CDS             complement(<1..773)
                     /locus_tag="VLA74_12660"
                     /inference="COORDINATES: protein motif:HMM:NF015666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSF51605.1"
                     /translation="MSDMSLIQENKVLVIGLGQLGLPVAKFVKANGFDVYGYDIKKEA
                     MVMAEQIHDIKITDSFKEFDIYIICISTHRPNDIYSPQIDSLFSIASRISVEGKIGAL
                     VSIESTVPKGTSRRIFELLGHRFHVVHAPHRWYSLDEEKYGVNQLRVIGGVNPCCLKA
                     GSDFYTGTMDNNQPSQDKNSLTSGYEIYNERDFSLRRDLLYSKSSKKEENDAENLIYS
                     KAGLGIKMHHVSSIEIAELTKIIENSHRYLQIAFAEELY"
     gene            1035..1835
                     /locus_tag="VLA74_12665"
     CDS             1035..1835
                     /locus_tag="VLA74_12665"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HSF51606.1"
                     /translation="MTLLISTQKLDELIQKKDKKLRIIDTRSFGEYVLGHIPGSINTE
                     LMQFHWSDTTKNGIKQFNKQNTKLFSNFGIKKNTFLVFYENISGPSAARGVWLSLYFS
                     HKKVAMLDGGFDKWRVENRVIDTESEKFQHRRFEGKPYSSILADLNFMKKVIKKKKDF
                     QIIDVRTSDEFSGQQVRACRRGHIPLSRNIDWNTNVKDGRFKSLNELKKIYTEISPDK
                     ETVTYCQGGYRAANTFVILSELGFKKAKLYLGSWNEWGNDMSLPIENN"
BASE COUNT          742 a          285 c          339 g          690 t
ORIGIN      
        1 aaataaagtt cttcagcaaa tgctatctga agatacctat gagaattttc tataattttt
       61 gtcaattcgg caatttctat tgaagaaaca tgatgcattt ttatgcccaa gccagctttc
      121 gaatatatca aattttctgc atcattttcc tcctttttac tagattttga atatagcagg
      181 tctcgcctta atgaaaaatc cctttcgtta taaatctcat atcccgaagt gagggaattc
      241 ttgtcttgag atggttgatt attgtccatg gttccggtgt agaaatctga accagctttt
      301 aaacagcagg gattaactcc tccgattaca cgtaattgat ttacaccata tttttcttca
      361 tcaagtgagt accacctatg aggagcatga actacatgaa accgatgacc taacaactcg
      421 aatattctcc tagaggtacc tttaggaaca gtactctcaa ttgagaccaa agcgccaatc
      481 ttaccttcta cggatattct gctggctatt gaaaataagc tatctatttg gggagaataa
      541 atatcgtttg gcctgtgagt ggatatacat atgatatata tatcaaattc tttgaaacta
      601 tccgttatct tgatatcatg aatttgttca gccataacca ttgcttcttt ttttatatca
      661 tagccataca catcaaaacc attagctttt acaaatttag caacaggtaa acccaattga
      721 cctaatccaa taactagaac cttattttct tggataagag acatatcaga cattcgaaag
      781 aaaattcaat ttttttatta tatatattgg cgaaaagaga tactatgaat ttgtataata
      841 attttaaatt atatttttag gtagaccttt tttttataaa ttttgacata tcaattgtta
      901 agaatgcatc tgttttacaa attcagggta aaaaatttat ggataaatct catgtaaaga
      961 aaatcaattt tgttatttaa tataacaatt ataaaagaaa ataaattgat tagaatctat
     1021 atctattgta tctattgaca ttattaattt ctacacaaaa attagatgaa ttaattcaaa
     1081 aaaaggataa aaagttaagg ataatcgata ctaggtcttt tggtgaatat gttttgggac
     1141 atattccagg ttctataaac acagaattaa tgcaatttca ttggagtgat acaacaaaaa
     1201 atggcattaa acagttcaat aaacagaata ccaagttatt ttctaatttt gggataaaaa
     1261 agaatacttt tcttgttttt tatgaaaaca tttctgggcc ttcagctgca agaggagtct
     1321 ggctttcatt atatttttca cataagaaag tcgctatgtt agacggagga tttgataaat
     1381 ggagagttga aaatagagta atcgacacag aaagtgagaa atttcaacat agacgatttg
     1441 aaggtaaacc ttattcgtct atactggcgg atttaaattt tatgaagaaa gtgattaaaa
     1501 agaagaaaga ttttcagatt attgatgtac gtacttctga tgaattttca ggacaacagg
     1561 ttagagcatg caggagagga catataccct tgtctcggaa tattgactgg aatacaaatg
     1621 ttaaggatgg aagatttaag tcgttaaatg aactaaaaaa aatatataca gaaatttcac
     1681 ctgacaaaga aacagttaca tattgtcagg gtggatatag agcagcaaat acatttgtta
     1741 tattaagcga acttgggttt aaaaaggcga aattatatct tggatcatgg aatgaatggg
     1801 ggaacgatat gagtctacca atagaaaata attgaagtgg tttctaatag aattaatcaa
     1861 ttttctatag cttttattct tgaacggatt ctatacttga tataatagat attcgattat
     1921 atattactat gaaaactata gagaaattgt ttatttagag ttataagata ttatagatag
     1981 agattataga ttgatctgag acgacaacga agattgagac aactagtgac attaacgaaa
     2041 tcaggtttcc taaaag
//
LOCUS       DATIAS010000624         5695 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1886687, whole genome shotgun sequence.
ACCESSION   DATIAS010000624 DATIAS010000000
VERSION     DATIAS010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5695
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1886687"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(522..941)
                     /locus_tag="VLA74_12670"
     CDS             complement(522..941)
                     /locus_tag="VLA74_12670"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSF51607.1"
                     /translation="MKSITRYLTLNTSKRIEMINITSHVRKAVEESQVKEGLCLVNAM
                     HISASIFINDNESGLHYDFEKWLEKLAPHNPIEQYKHNDTGEDNADAHLKRQVMGREV
                     VVAITSGKLDFGPWEQIFYGEFDGQRPKRVLIKVLGD"
     gene            complement(1031..1246)
                     /locus_tag="VLA74_12675"
     CDS             complement(1031..1246)
                     /locus_tag="VLA74_12675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00251.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HSF51608.1"
                     /translation="MKYLVTVSFNSSHFFHVENNEIKISLKSKPELGKANRELIKSLS
                     EHFNVSTNKIKILSGFSSRKKVVEILF"
     gene            1370..1990
                     /locus_tag="VLA74_12680"
     CDS             1370..1990
                     /locus_tag="VLA74_12680"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HSF51609.1"
                     /translation="MFNKFIYTFYQDINPRNWTSIYQNTSAGYLTLMFLFYHGIGIIG
                     LLIGTSIIDNIFDYEESSIPHSLIPVIMAGPIEESLFFGIPFYLFGNNLVTLAGGIIW
                     AMLHIINTYPTDINQLAYANWLFVIPSLFYSLRTWISRKGWFAIMAHSIWNVLFFSLS
                     CYSEDSICSFYINKQDITTILLAGILLTITYLLMKWRQNRKLLNET"
     gene            complement(2034..2573)
                     /locus_tag="VLA74_12685"
     CDS             complement(2034..2573)
                     /locus_tag="VLA74_12685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51610.1"
                     /translation="MEILQERDLARYLFNQYTINPKNWNFIISTSPVRNSFFDALISN
                     SNEVWQLKIDSLYKPNPMIMGAKVDNHPSKLEKKISNTSHFGYRILETSTIMNFLKNL
                     SEEQNNNSIKDNDINLRLHSLLSSLEPVKPIRGKNYLCGPFIFTEKKLKFDNNHDKIS
                     ETISSKMKEKLRRKYSSYG"
     gene            complement(2658..2972)
                     /locus_tag="VLA74_12690"
     CDS             complement(2658..2972)
                     /locus_tag="VLA74_12690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSF51611.1"
                     /translation="MVKFMVGKKSDLPEGKMTHITAGGKEILVANVEGAYYAIGNICT
                     HAGAELHEGELEGKELKCPWHGSKWDVTNGNLIWFPQNLKSVGSYPTSIENDTIYVEV
                     EV"
     gene            complement(3465..3614)
                     /locus_tag="VLA74_12695"
     CDS             complement(3465..3614)
                     /locus_tag="VLA74_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51612.1"
                     /translation="MSIYVPADTVISSIKNTGFETTLYDCKGSGKEKQKMKAGGRSQV
                     IELGY"
     gene            complement(4038..4379)
                     /locus_tag="VLA74_12700"
     CDS             complement(4038..4379)
                     /locus_tag="VLA74_12700"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF51613.1"
                     /translation="MTSMLFTGILSNPTTVALAQQQESVTITQGAADEGNLEPFFPRA
                     VNVIPGNIVSWTNEDSIPHTVTAGGTGEPLFDSGPISPGMTWDNMFDSTGTFGYHCSI
                     HPWMMGRVMVG"
     gene            5346..>5695
                     /locus_tag="VLA74_12705"
     CDS             5346..>5695
                     /locus_tag="VLA74_12705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51614.1"
                     /translation="MTDKGVLPFEIVKSEKTDENKIKAGLKKIEIFASPEQVDEIIAG
                     IESLKLEATLYDSHGYGQSKQKIRSGKAGGQTATISSNRKTIVTIAQSDILEELIQKL
                     KHINDKSEKKIGVIS"
BASE COUNT         2066 a          819 c          831 g         1979 t
ORIGIN      
        1 ataaaaatga tatttcaaga aatgaatttg attcatagat acaaattaaa atcttaataa
       61 atgcatagtc gatcttggat aatagaaaac ctaattcatt gtggttaaca tttgtaagaa
      121 gaaattatag atgaaaatag atacacattt gaaaaaacca ttttaactga catactggaa
      181 agagagaaaa aaactgttcg aatcagtaaa gtgttagacg agaaacagaa acgatcagat
      241 gatatgataa atactcaaaa atcaggatgg aaaatgcaat taaaacaaat tatcaagtcc
      301 aagttgtaca tgcatgaaga tataaaatat ataaattaca gcaatttgaa aataaatacc
      361 tagaatcatt cactagaagt attaacatca ccaaaaatta acatatatca aaaattaaca
      421 gattattttt ttatgtgtat tctagtataa aatatatgat ttccacgttc aatttttcta
      481 tcaaaattaa ataaaaataa tttaatatat ttcacaatct tttaatctcc caatactttg
      541 attaatactc tttttggtct ctgtccatca aactcgccat agaaaatttg ttcccaagga
      601 ccaaaatcta gttttccact tgtaatggct acaactactt cacgtcccat tacctggcgt
      661 tttaaatgtg cgtcagcatt atcttctcct gtatcattat gcttatattg ttcaattgga
      721 ttatgaggtg ccaatttttc taaccatttt tcaaaatcat aatgaagtcc actttcatta
      781 tcgttaatga aaatactagc agaaatatgc attgcattta caagacacaa tccttccttg
      841 acttgacttt cttcaacagc ttttcttaca tgcgatgtaa tatttatcat ttcgattctt
      901 tttgatgtgt tcaaagtcaa atatcttgta attgatttca ttgtcaatta gaagatcaat
      961 taatagttat aattgtactt tgtttctaat tatattcaaa taattaaaat gtagatacga
     1021 agctatttga ttagaataaa atttccacta ctttcttcct tgaagagaat cctgataata
     1081 tttttatttt attggtagag acgttgaagt gttctgataa tgactttatt aattctctat
     1141 ttgcctttcc taattctggt ttagatttta atgaaatttt gatctcatta ttttctacat
     1201 gaaaaaaatg tgaagagtta aaactaactg taacaagata tttcatttta tatacagata
     1261 ataaatttta gttatattta tcgattaaat tcatgatagt aatgcttagg agatactagt
     1321 atatcttgaa attttatata ggtaattaat ttcaaggttt atcaagatca tgtttaacaa
     1381 atttatatat accttctatc aagatatcaa tccaagaaat tggacatcga tttatcaaaa
     1441 tacatcggca ggatacttga ctttgatgtt ccttttttat catggtatag gaataattgg
     1501 cttattaata ggaacatcta ttatagataa tatctttgat tatgaagaat catctatccc
     1561 tcattcactg attccggtta ttatggcagg tccgattgag gagtcacttt tttttggaat
     1621 tccattttat ttatttggga ataatctagt gactttggca ggaggaataa tctgggctat
     1681 gttacatatt attaatacat atcccacaga cataaatcaa ttagcatatg ccaactggtt
     1741 atttgtaata ccatcattat tctatagcct aagaacatgg ataagtagaa agggatggtt
     1801 tgcaataatg gctcattcaa tatggaatgt attatttttt agtttaagtt gttattctga
     1861 agattccatt tgttcatttt atattaataa acaagatata acaacaattt tactggctgg
     1921 aatattgcta acaattacat atctgttgat gaaatggaga caaaatagaa aattgttaaa
     1981 tgaaacctaa taattaaaaa gagaaaatga gttcaaagaa atatgtataa tgattagcca
     2041 taagaagaat attttcttct tagcttttct ttcattttag aggagatcgt ttctgatatt
     2101 ttatcatgat tattatcgaa tttaagtttt ttttctgtaa aaatgaatgg accgcataag
     2161 tagtttttcc ccctgatagg tttaacaggt tccaatgatg acaacaaaga atgaagacgt
     2221 aaattgatgt cattgtcttt tatagaatta ttattttgtt cttctgatag atttttaaga
     2281 aaattcataa ttgtacttgt ctcaagaatt ctatatccaa aatgagatgt attactaatc
     2341 ttcttttcaa gctttgaagg atggttatca acctttgcgc ccataatcat agggtttggc
     2401 ttgtagagtg agtctatctt taattgccaa acttcattag aatttgagat taaagcatca
     2461 aagaaagaat tacgaacagg tgatgttgag ataataaaat tccagttttt aggattaatt
     2521 gtatactggt taaaaagata tctggctaga tctctttctt gtagaatttc catataacga
     2581 ttgaaaaaaa atgatatata aactgatatt atatctccag aataaaaata aagaaggttc
     2641 tataaaataa taatacccta gacttctact tctacataaa ttgtatcatt ttcgatactt
     2701 gtaggatatg aaccaactga tttcaggttc tgtggaaacc agataagatt cccgttagta
     2761 acgtcccatt ttgaaccatg ccatggacat tttaattctt taccctctaa ttcaccttca
     2821 tgtagttctg cgcccgcgtg agtacagata ttaccaattg catagtaagc cccctcaacg
     2881 ttagctacaa gaatctcttt accccctgca gttatatggg tcatctttcc ttctggaaga
     2941 tcagattttt ttcctaccat gaactttacc ataaatcaat tattaacatt atctttatat
     3001 tatttatgca ttaaacaata caaattatag tacgaaaatt tattatgata agcatctaca
     3061 aagattctat ccgatttaat tattaattat cttctaactt ttagatcaat aatgaattat
     3121 tttatattat tatatcgaat agtaccaata tgtgctagaa tatcttattt agtattgatg
     3181 ttttgtagat gaaaaagaaa atatctattt tgttaggagt aatggtccat tagtaaaacg
     3241 aaaaatagta tagttagaaa aatgacatca aaatattaaa aattaattcg atatgtattt
     3301 aatatctatt ttctacaaaa aaattatata tgcattaaag catccatcgg agaaatcgtt
     3361 atcacgctta ttttatcatt agaatatgta ttagtttttt tgatttcatc caataattca
     3421 gaaagtctat accaattaac tatacttacc gagattgatc tagttcaata ccctaattct
     3481 attacctgac tacggccccc tgctttcatt ttttgtttct cttttccact acctttacag
     3541 tcatacaatg ttgtttcaaa tcctgtgttc ttaattgagg aaattacagt atcagcaggt
     3601 acatatatag acataaactc aggcttttac tcttattcaa cagtgggagt actactatta
     3661 ccttaaatca aataatctta gacacttaat tttagatgca taaatattga aaataaaaaa
     3721 atagaacaaa taattaaaat aaagtagata tttaaacatt aaaattatag agtcgagttt
     3781 tgctctttta acttcctctt acagcttact aatagacctg tgctttatct tgataacttg
     3841 gtccatatcc aattgatatc tggcttttcc aagattttat agttcaagcc agtgttatcc
     3901 tcaagtaagg aacatattga taaggataaa acgtctaaca tatatccaaa aaaataggaa
     3961 tatcgacagg aacttgaaaa agctaaaaaa ataaagataa agcatcagat tacttggcca
     4021 aaaagaatga ttaattatta tccaaccata accctgccca tcatccatgg atgtattgaa
     4081 caatgataac cgaatgtccc tgtagagtca aacatattat cccatgtcat tccaggagaa
     4141 atcgggcccg agtcaaatag tggttcacca gttcctccag cagttaccgt gtgcggtata
     4201 gaatcctcgt ttgtccatga aactatgttt cctggtataa cattaactgc acgtgggaaa
     4261 aatggctcga gattgccttc atcagctgcg ccctgtgtaa ttgtcactga ttcttgttgc
     4321 tgagcaagcg caactgttgt tggattcgat aaaatcccag tgaatagcat gcttgtcatc
     4381 attatactca aggtcaaaat cttttttatg tacatataat cctcttttcc tgcttgatca
     4441 atgtataaaa attttagctg ggtttgtctt agtaatcatg atatagaaaa taattaggtg
     4501 tatgaatcac agtaattaat tatgttcatt atatatagat aataataaca agaaatgatt
     4561 tcctaaaaaa aatataccga atacaatcat tgctattaat atatatctgc tattagtact
     4621 agagaaatca gattaattca gttaaatcaa gagactcact aatggttaag aagacatggt
     4681 gagggggcat cgtaacctag attgatttga cgacataatt gtcatgttgt cagatttcta
     4741 gtagaaaaat aactaaagaa attattatta ctattatcag aagtagcaac aataaataaa
     4801 atgacaaaaa atagttagtt ttgagttgag aggtaaaatc actaatagta agtatccaaa
     4861 gttggaaaat tggaacaaga actctagaat attaattaac aacaatatag agaaatatac
     4921 tgaaaacaag atgtgaaata cttgtggttt tcaggtattt gctattctga atatattggc
     4981 aattttttgg tgtcgaaaat ttatggggat agaacattca caaactgtta tgcttaaaac
     5041 tcgacaatac tttcgttaag cagtatatct tcatcgtctg cgctggatgt gactgatcga
     5101 taaataaaaa aaattgatat cggatcattt taattttttc catgataatt agtttcttgt
     5161 tattgataga tagacggaat ttaatcaaat catgactaag tattcaagtt atatggaaat
     5221 ctgcggataa ctagaacaat aaattttaat gagtaccaat atgcaagtaa ctgctgtagg
     5281 gtgtaaaaaa tatcaaaaat tttataaaca aatactttat ttagattgta attatatatt
     5341 tcataatgac agataaaggc gttttacctt tcgaaatagt aaaatctgaa aagacagatg
     5401 aaaataaaat taaggcaggt ttaaaaaaga tagaaatttt tgctagtccc gaacaagttg
     5461 atgaaataat cgcaggaatt gagagtttaa agttagaggc cacattatat gactctcatg
     5521 gttatggaca gtccaagcaa aaaataaggt caggaaaagc aggaggacaa actgctacta
     5581 tatcctcaaa tcgtaagact atagtaacta tagcacagtc agatattcta gaggagttaa
     5641 tacaaaaact taaacatata aatgacaaga gtgaaaaaaa gattggtgta atctc
//
LOCUS       DATIAS010000625         5191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1477317, whole genome shotgun sequence.
ACCESSION   DATIAS010000625 DATIAS010000000
VERSION     DATIAS010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5191
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1477317"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..431
                     /locus_tag="VLA74_12710"
     CDS             <1..431
                     /locus_tag="VLA74_12710"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSF51615.1"
                     /translation="YARWAGKRLPTEAEWEKASSWNEDLNRKTIYPWGDDSPKPENAN
                     LLESFLWKTSKCGCYEKGKSFYGCYQMIGDIWEWTSSEYSLYPGFQPKFPEYTDKWAI
                     NQKVLRGGCFATPRRQIGNSYRNYFKPHERILFAGFRCAK"
     gene            complement(434..1423)
                     /gene="egtD"
                     /locus_tag="VLA74_12715"
     CDS             complement(434..1423)
                     /gene="egtD"
                     /locus_tag="VLA74_12715"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:NF021530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HSF51616.1"
                     /translation="MPDQNNSNTTIDEFARDVKYGLGRKRKRLDPKYFYDKTGSELFE
                     SICIQPEYYLTRTEYKIILKNIGELVKYFDNQNVSIIELGSGSSKKTKIILKYFLEKQ
                     ENKLYYFPIDVSYEMLFNSDKKLLKDFPKITSHPISSDYFDGLRQANEYIHANGNIPD
                     KKLILFFGSSLGNFEPKHAINFLRSIRKGLAPNDSFLIGFDLVKKKEVLEAAYNDDNG
                     ITAQFNLNILRRINNELDGEFDLESFKHFAYFNEKKSRIEMHLVSKIKQNVKIGKINK
                     SFNFLKNESIHTENSYKYKIQDIKNFAKKSSMKVEKNFLDDNNWFSLSLLVPN"
     gene            2001..2107
                     /locus_tag="VLA74_12720"
     tRNA            join(2001..2040,2046..2107)
                     /locus_tag="VLA74_12720"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2037..2039,aa:Leu,seq:caa)
     gene            3376..4707
                     /locus_tag="VLA74_12725"
     CDS             3376..4707
                     /locus_tag="VLA74_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSF51617.1"
                     /translation="MKRHIIVIDIVGLEEKHLASNYLPTINDLASLGEYCKLKPVFPA
                     VTCSVQTSFLTGEYPNRHGIVSNGFMDRNTYNVSFWEQYSSLVQAPRIWDLAKRRDPN
                     LNTAVLFWQNTLYANSDVIITPKPIHLENEMIMWCYSKPVGYYEEIGKKIGNFDLSKY
                     WGPFASHLSSEWICNATQYTIEKYKPNLMFTYIPHVDYSAQRFGKDSSEVHNDLVKAD
                     ILVERIIESTKTVGIYDNTQFIIFSEYSFNNVTDAIPINLILRDNSMLNVREINGKEY
                     VDFEFSKAFAVVDHQIANIYIKSSQEFSNVLKILQNIPDIEIIITNEEKKFFNINHER
                     TGDIIAVSKRNKWFSYYWWYDKEHAPDFANRVDIHRKPGYDPLELFINPQTKSITFET
                     NLIKGSHGRPFNPQTLEGCSLYVSNVKSGIQRDSENAINVVDVGKYLIGSI"
     gene            4729..>5191
                     /locus_tag="VLA74_12730"
     CDS             4729..>5191
                     /locus_tag="VLA74_12730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51618.1"
                     /translation="MINYCITLNSFHETQSLDKILENLVRCNYDGIEIEGSPNQFSWK
                     QYLDKIKCFNLSVIGVTGAWTKRDVENGHTPILLTNDYNKLSYSITYIQNCIKMCNYL
                     GGNLFNICLLSDYSESQDFNHTNISPREKTKSLQRITSILSDLSKFSQEYGI"
BASE COUNT         1780 a          776 c          761 g         1874 t
ORIGIN      
        1 cttacgcaag atgggcagga aaaaggttac ctactgaagc agaatgggaa aaggcatcta
       61 gttggaacga agatctaaat agaaaaacaa tttatccttg gggggatgat tctccaaagc
      121 ctgaaaacgc caatctgtta gaatcctttc tttggaaaac atctaaatgt ggttgttatg
      181 aaaagggaaa gagcttctat ggatgttatc aaatgattgg tgatatttgg gaatggacaa
      241 gctctgaata ctccctttat ccaggatttc aaccaaaatt tccggagtac accgataaat
      301 gggctataaa ccaaaaagtt ttgcgcggcg gatgttttgc aacaccacga cgtcaaattg
      361 gaaacagcta tagaaactac ttcaaaccgc acgaacggat cctctttgca ggatttcgtt
      421 gtgcaaaata atcttaattg ggaaccaaca gagataaact aaaccagttg ttgtcatcta
      481 aaaagttttt ttccaccttc atactactct ttttagcgaa atttttaata tcctgtattt
      541 tgtacttgta agaattttca gtatggattg attcattttt taaaaaatta aatgatttgt
      601 taatttttcc tatcttaaca ttttgtttga tttttgaaac aagatgcatt tcaattctac
      661 tttttttttc gttaaagtaa gcaaagtgct taaatgattc taaatcaaat tctccatcta
      721 attcattatt tattctcctt aaaatgttta aattgaattg agctgttatt ccgttgtcgt
      781 cgttataagc tgcttccaaa acctcctttt tcttcacaag atcaaatcct atcaaaaaag
      841 aatcattggg ggctaatcct tttctaatgg atcttaaaaa attgatggca tgttttggct
      901 caaagtttcc caaactcgaa ccaaaaaata gtatcaattt tttatccgga atattaccat
      961 tggcatgaat atattcatta gcttgtctta atccatcgaa ataatcagag gaaatgggat
     1021 gactcgtaat ttttggaaaa tcttttagga gttttttatc actattgaat aacatttcgt
     1081 aagatacatc tattggaaaa taatataatt tgttctcttg cttttcgaga aaatatttta
     1141 ggattatttt ggttttctta gagctaccac tacctaattc aataatggac acattttgat
     1201 tatcgaaata tttaactaat tctcctatat tttttaggat tattttatat tctgttctag
     1261 ttaaataata ttccggttga atgcagatcg attcaaaaag ttcagaacca gtcttatcat
     1321 aaaagtattt tgggtcaagt ctctttcttt ttcgtcccaa tccatatttt acatccctgg
     1381 caaattcatc aatagttgta ttactattat tttgatccgg caaatgctat atcaatttgt
     1441 acttgatatt tattaaattc tttgaaatta gtggaaaaat tggtataatt ttgatttgac
     1501 ggcatactca tcgcgtagcg ctattttaga gaaaatattg caattatatg accccttaaa
     1561 tccattatag tttaatcaaa attaactcag gagtttgatg ctataatttt tatatttttt
     1621 tataattaca aaaggctcct atttaaaaac aaataacgtg gttaatagaa gattatcacc
     1681 aatttaaaag taatgaaaat atatttattc ttgctgcatc ttggtattgc aaataaaatg
     1741 aaaatcttcc gttatatttc attttgtgtt taatgatgat cattgttttt caagaagaaa
     1801 aaaattgttg tgtattggta attttaaatt caaaacagag tacaaaaatc atcagaattt
     1861 tggtatcaaa attagtcagg atcaaattta gattaaaaat tcggatctat tgtcagttga
     1921 ttttggatga taactctaaa tatccaagct aaaattgtat tattgtcagg caaaattgtt
     1981 aaaaactcta attttgagtt ggaggagtcg cgaagcctgg tcaaacgcgc aggactcaag
     2041 atcaaatcct gaataatggg tgatcccgtc ctttaggggt tcgtgggttc aaatcccacc
     2101 tcctccattt aatttttata atattatata tctatgacca tgtattgtta aatgatatta
     2161 gtaatccttt ttttttatct tatttatcat attttttcaa aaaatctata gagtatactg
     2221 gtgtccacaa taaattaatt tcattttgta atagtaaagt gataaagcta ctagtacgaa
     2281 tttggaattt cttatattgc tgttgtaaat atatacaaag catgcaatcc tatatttcct
     2341 ctggtaatga catacatttc tctggtgtgt aaaagtgatt aggtctgata ctataacaaa
     2401 ttacttaact ctcataaggc ttccaaatat ttttaccact ataccaaata ttcttttggg
     2461 atattttcta tttactcata taaaggatac aaattatatt gatctgtttt tattgatatc
     2521 tatttctatt ttattgtata ttggggggat agttttaaat gattatgtgg acttaaaaaa
     2581 agacaaaaaa gaaagaccat cacggcctct tccttcaaac aaaatttcca agaaaaatgc
     2641 tctctatatt tacattatat ctatttcatc ttcggtaatt ttatctatat taacaagtgt
     2701 cactggtttt ttgataactg ttataataat tgctttaatt tttatctata atttatactc
     2761 aaaagaaaga tcgttgggac ctgtaaatat gggattgata agaagcttga acgttctatt
     2821 aggttcaagt atttcttttt ccttgttgga tctacaattt actagcctta aggttattat
     2881 cattctcttt tttgaatttt tatatgtttt tgtaattaca ttcacaagca gaaacgaagt
     2941 caaaaaagat tctacagaga atcactttct gttatcattt tctataattt atttaataat
     3001 attttctatt ttatttttaa tttttattga catctttaac ttcgattcaa taataaatac
     3061 cataatattt acagttgcta tagtttattc acacctatat ttctacaaaa ataaaatctc
     3121 catacaaaaa ttaatatcat tgctcataat ttttatggtt atatacgatt caatttttat
     3181 cgccgatagc ataggatatt tatacggttc caccgtactt cttttaatac ctcttattat
     3241 atttcttgga aaaaagatgt atatgacata gctttttatt tttagtatct tacagaggac
     3301 acattttata gaaaaaaatc catttttaaa ccatattctt taaatctagt aacacccagc
     3361 tactaataca aattcatgaa aagacatatt atagttattg atatagttgg attagaagaa
     3421 aaacatcttg cttcgaacta tcttcctaca ataaacgatc ttgcaagcct tggagaatat
     3481 tgcaaattaa aaccggtatt tccagcagtt acttgttctg tacagactag cttcttaact
     3541 ggtgaatatc caaacagaca tggaatcgta tcaaacggtt ttatggatcg caatacatat
     3601 aatgtatcat tttgggaaca atattcttcg ttagttcaag ctcctaggat atgggatctt
     3661 gcaaagagaa gagatcctaa cttaaatact gcagtacttt tttggcagaa tactctatat
     3721 gcaaattcag atgttataat aactccaaaa cccatccatt tagaaaatga gatgatcatg
     3781 tggtgttatt ctaaacctgt tggttattat gaagagattg ggaaaaaaat tggcaatttc
     3841 gatttatcta aatattgggg gccattcgca tcacacttat ctagtgaatg gatttgtaat
     3901 gcaactcaat ataccattga aaaatataaa cctaatctga tgtttacata tattcctcat
     3961 gttgattatt cagctcaaag atttggaaaa gatagtagtg aagttcataa cgatctagta
     4021 aaggctgata tccttgttga aaggattatc gaatctacaa agaccgttgg aatatacgat
     4081 aatactcaat ttataatttt ttcagaatat tcttttaata acgttactga tgctatccct
     4141 atcaatttga ttcttagaga taactctatg ctaaatgtta gagagataaa tggaaaagaa
     4201 tacgtagatt ttgaattcag taaggcattt gctgtagttg atcatcaaat tgctaatatt
     4261 tatattaaat ctagtcaaga attcagcaac gtattaaaaa ttcttcaaaa tattcctgat
     4321 atagaaataa taataactaa tgaagagaaa aaatttttta atattaacca tgaacgtaca
     4381 ggagatatta tagcagtctc aaaacgtaat aaatggttta gttactactg gtggtatgat
     4441 aaggaacatg caccagattt tgccaaccgt gtggatatcc atagaaaacc aggttatgat
     4501 ccactcgaat tatttattaa tcctcaaacc aaatctatta catttgaaac taatttaatt
     4561 aaaggttcac atggacgacc gttcaatcca caaaccttgg aaggttgttc actttatgtt
     4621 tctaatgtta aatctggtat tcaaagggac tctgaaaatg ccatcaacgt agtagatgtt
     4681 ggaaaatatt tgattggttc tatctaacca aattataggg tgctatcctt gataaattat
     4741 tgtatcacac tcaattcatt ccatgaaact caatcactag acaaaattct ggaaaatcta
     4801 gtgagatgta attatgatgg aatagaaatt gagggatcgc caaatcaatt ttcttggaaa
     4861 caatatctgg ataagataaa gtgctttaat ttatcagtaa tcggggtaac gggagcgtgg
     4921 acaaaaagag atgttgagaa cggacatact cccattcttc taacaaatga ttataataaa
     4981 ttatcatatt caataacata tatccaaaat tgtattaaaa tgtgtaacta tttaggtgga
     5041 aacttattta atatctgttt attatctgat tattcagaat cacaggattt caatcataca
     5101 aatatttctc cccgagaaaa aacgaaatct ttgcaacgaa taacgtcaat tttatcagat
     5161 ctatcaaaat tctcccaaga atatggcata t
//
LOCUS       DATIAS010000626         4761 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1748978, whole genome shotgun sequence.
ACCESSION   DATIAS010000626 DATIAS010000000
VERSION     DATIAS010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4761
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1748978"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            860..1057
                     /locus_tag="VLA74_12735"
     CDS             860..1057
                     /locus_tag="VLA74_12735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51619.1"
                     /translation="MKYQETFNADIKQIQPISESILGLQIIHCDTCKKELASYDVYTS
                     SNIEGILFLKRSCQNCLPKQI"
     gene            complement(1094..2104)
                     /locus_tag="VLA74_12740"
     CDS             complement(1094..2104)
                     /locus_tag="VLA74_12740"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HSF51620.1"
                     /translation="MPVDSGIVLICGILTALFFDFVNGFHDSANAIATVVGTRVLKPL
                     QAVSMAALANFAGPFIFGTAIAATVGKGIIQAEFSTFEVIIAGLIGAIVWDLLTWYFG
                     LPSSSSHALIGGLIGSALVAGGVQALVFGGIEKVLTFIAVSPMLGFIVALSFAIIIMY
                     FLRKYRPYKINKVFGKLQIVSSVFFSLTHGANDGQKTMGIITALLIAGGLLDAKSFVV
                     PTWVILVSAIAIALGTFLGGWRIVKTMAFRITDLKPFQGFCAETGGGVILTTMAWLGI
                     PVSTTHAISGAIMGVGSTRRLSAVRWGIGRRIVYAWLITIPASAAVSAIVFVMIKTIN
                     GN"
     gene            complement(2138..2776)
                     /locus_tag="VLA74_12745"
     CDS             complement(2138..2776)
                     /locus_tag="VLA74_12745"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HSF51621.1"
                     /translation="MSNKWLSWVRTNDKDILDSLESQGSNLVKSTTLLVEILTDYEKS
                     LEEKKQKIRELEHTGDEISHRLFTIISQTFVTPIDREDISKLTSSIDEVLDYVDGISE
                     RFVLFKIKKPTQYMMELGKIILSASQEIYILVTMLKRIKDHQELRNHCANIKKYEHDA
                     DKIYRKAIAELFETNDPIEIIKLKEVYDNLEESLDKCQDVADIVEDISLKYG"
     gene            3047..3664
                     /gene="purN"
                     /locus_tag="VLA74_12750"
     CDS             3047..3664
                     /gene="purN"
                     /locus_tag="VLA74_12750"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HSF51622.1"
                     /translation="MINLAIIISGRGSNMKAILSSILSGNLKNVNPAVVISNRKDAIG
                     LEVAKNNFNIPTEIVLSNGKKGWDYDKEIVSKLRSYNVLPSNGLICLAGYMKIISTEF
                     VNEYKFRIMNIHPALLPSFRGLHAQKQALDYGVKVSGCTVHFVNDEVDTGPIILQQAV
                     NVYTTDTEEDISNRILELEHKLYPQAVKLFAENKLKVEGRKVIIL"
     gene            3712..4023
                     /locus_tag="VLA74_12755"
     CDS             3712..4023
                     /locus_tag="VLA74_12755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51623.1"
                     /translation="MTSTIGSYSRIKLHIFVPSNRKIWTIVSKNNEYWLDLDLDYCTC
                     KYYFFKTLSGKDRCIHLKTLAEALRLEDYDRVEFQDDEYVGFLTSLLKDVLSWNYTLT
                     R"
BASE COUNT         1623 a          777 c          722 g         1639 t
ORIGIN      
        1 tgagttacta ttttcaattg aaacaccttc atcagtaaac ttcacgccag aaaccatact
       61 atggattttt aaacctaata ttttaattat tgttttttca ttcatggcat gatataagca
      121 tctctttatt tttgataaat attgattcgc tgttcacata ttatgcaaat atctaaaaaa
      181 attgaagatt ttttatgtgc tttaggtaag acatattaga atgaaatttt gtaaaagcaa
      241 aatatgaact gcaaacgtca aacgatctgc tgatttggta ctgataatta tagtcgtaaa
      301 atccattcgt gaatatggta ttagaataaa taattatatt tacaagaaac aggatacata
      361 catttgtagt tagatatttt ctatttatac tttcaatctc tgagtttcaa accttacagc
      421 ttttaaagat attagaaatt atggatctca tgaattttag tggaagggtt gaatttttag
      481 gaatagtaaa tagaaaatta gggcagattt gttgttcttt atatttttat ttcacgtttt
      541 ctcattaaat ttaaattaat attagtagaa gcaacaaaga aagaaaatat tgattaaaat
      601 tttatattgt atttactaaa ttttcatttg ttatttccac cttaaagcat tcatcaaaaa
      661 gattacattg gtgtgacaat caaacactct ttcccaaagt agttagggtt aaaaaattct
      721 atgttaagat ttcttgagta atatcattgg aagttaccat atgatttttg aactaatcta
      781 tttaattcta tatagtttat gatatctata tagattatat ataaagagta tattaaagcg
      841 atgatggcta tatatatcaa tgaaatacca agaaaccttt aacgctgaca taaagcagat
      901 acaacctatt tcagaatcga tactaggcct gcagataata cattgtgata cctgcaaaaa
      961 agaattagct tcttacgacg tgtatacttc cagtaatatc gagggtattc tttttttaaa
     1021 aagatcctgt caaaactgtc ttccaaaaca aatctaattt ttagttctca attattttat
     1081 tggcaaatta tatttaattt ccattaatag tttttatcat tacaaaaaca attgcagaaa
     1141 ctgctgcact agctggaata gtaattaacc aagcatagac tattcttctc ccaatacccc
     1201 accttacagc agaaagtctt cttgtcgaac cgacacccat tatggcacct gatatggcat
     1261 gcgtagtact tacgggaatt ccaagccatg ccattgtggt tagtattact cctcctccag
     1321 tttcagcaca gaatccttgg aacggtttta ggtctgtaat tctgaaagcc atagtcttta
     1381 ctattctcca gccacctaga aacgtcccca aggcaatagc tatggcagat actaaaataa
     1441 cccatgttgg tacaacaaat gatttagcat ctaaaagtcc accagcaatt agtaatgctg
     1501 taataattcc cattgttttt tgtccatcat ttgcgccgtg cgtaagtgaa aagaatacag
     1561 aagaaacgat ctgcaatttt ccaaatacct tattgatttt atatggtcga tacttcctta
     1621 aaaaatacat tataattatc gcaaaagata aagcaactat gaatcccaac ataggtgaaa
     1681 ctgctataaa agtaagtact ttttctatgc caccaaagac aagggcttgg acaccacccg
     1741 ccactaatgc agacccaatt aaacctccta ttaatgcatg actgctagat gatggcaaac
     1801 caaaatacca ggtcaataaa tcccatacaa tagctcctat aagacctgca ataattactt
     1861 caaacgttga aaattctgct tgtattattc cctttccgac cgtagctgca attgctgtac
     1921 cgaatataaa aggacctgca aagttagcta gagcagccat agacactgct tgaagtggtt
     1981 taaggacacg ggtaccgaca actgttgcaa tagcatttgc agaatcgtga aatccattta
     2041 caaaatcaaa gaataaagct gttaatattc cacatattag tactattccg ctatccacgg
     2101 gcattattca gcaaccacct tttttaaaca aattgagcta tccgtatttc aaagagatat
     2161 cctctacgat atctgcaaca tcctgacatt tatcaagaga ttcttcaagg ttatcatata
     2221 cttctttgag ttttattatc tctattggat cattggtttc aaacaattct gcaatcgcct
     2281 ttctataaat cttgtctgca tcatgttcat atttcttaat gtttgcacaa tggttgcgta
     2341 attcttgatg atcttttatt ctttttaaca tagttactaa aatataaatc tcctgtgaag
     2401 ctgataaaat gatttttccc aattccatca tgtattgcgt cggtttcttt attttaaaaa
     2461 gaacaaatct ctcagaaatt ccatcaacat aatcaagaac ctcgtctata gagcttgtaa
     2521 gtttggatat atcttctcta tctattggag ttacaaatgt ttgggaaatt atggtaaata
     2581 gccggtgtga aatttcatcc ccagtatgct ctaattctct tatcttttgt tttttttctt
     2641 ctagagattt ttcgtaatct gttagaattt ctaccaaaag tgtggttgac tttacaagat
     2701 tagaaccttg actttccaaa ctgtcaagga tgtccttatc gtttgtccga acccaggata
     2761 gccatttatt tgacaattaa atacgttcta tgacatcaat attcatttat ttctgttacg
     2821 attattaata cttcattttc acattctttg gagcatataa actaactttt caatattttc
     2881 agtcttaaga agacttttca tgattttgcc tgtataattt ccacgaataa atttcaataa
     2941 aataagtttt taaaaatata ctgttcaact tatttactat tttgatttta tctattgaat
     3001 tcgaaacttt taatttattt tctagcaatt ataatctcaa aatataatga taaatctcgc
     3061 aatcatcatt tctggcaggg gcagtaatat gaaagccatt ctttcttcta tcttgagcgg
     3121 caatttaaag aatgtgaacc ctgctgtagt tatctcaaat agaaaagatg ctattggact
     3181 tgaagtcgca aaaaataatt ttaatattcc tactgaaatt gttctaagta atgggaagaa
     3241 aggatgggat tatgataaag agatagtgtc aaaattaagg tcatataatg ttcttccatc
     3301 aaatggattg atttgtcttg cagggtatat gaaaattatt agtacggaat ttgtaaatga
     3361 atataaattt agaataatga atattcatcc tgcgttacta ccctcattta ggggattaca
     3421 cgcacagaaa caggcactgg attacggtgt taaagtgtcc ggatgtacgg ttcattttgt
     3481 taatgatgag gttgatacgg gaccaattat tcttcaacaa gcagttaatg tttacacaac
     3541 tgatactgaa gaagatattt caaataggat attagagctg gaacataaat tgtatcctca
     3601 ggcagtaaag ttatttgcag aaaacaaatt aaaggtggaa ggtagaaaag taattatttt
     3661 gtaattgaaa agacatttta agcatgtcaa aattatattt aacataataa aatgacaagt
     3721 actattggtt cttacagtag gataaaactt catatttttg ttccaagcaa tagaaaaatt
     3781 tggacaatag ttagtaagaa caatgaatat tggttagatc tagatttaga ttattgtact
     3841 tgtaaatatt atttctttaa aactctctct ggaaaggata ggtgtatcca tttaaaaaca
     3901 ttggctgagg cattaagatt agaagattat gacagggtag aatttcaaga tgatgaatat
     3961 gttggttttc ttacatctct tctcaaagat gtcctatctt ggaattatac tctaacccgt
     4021 taaattgtta aaaaaactta actatatttt taaacgtctc agtcagataa atccggacac
     4081 tcttaatcaa aaatgtttac tttaattact tttgccccaa atgaaagtcg ggtgaagaat
     4141 catgacaaag acaaaaggca aggctactgg agtatgtcga acttgccaac cctacactat
     4201 ttattaattg gctatttttt gcaccacttt tttattcttt ttatttaaga tcgctatcca
     4261 ccatccgagt tttgcgctca ttatataatt tctctgtctg gcaaacattt ctcgaactgc
     4321 attatacgtc aatgcacagg tccgcgaagc catcatgcag aaataccgtc acgcgatatc
     4381 caattaaatt tgaagtgaga tcgttatcga tgaaaggggg cagtaaataa ctaattataa
     4441 atttagaaat gaacaagata ttaaaaaagt agtatctgac ttaagatgca acctgaatga
     4501 aacattgtag aatggcagtt ggtatcttat agatgtgcgc aatgggtatc accacgtatg
     4561 tgttaaaaaa caataattta tcagtattcg aaattttgct tattaccttc aatcttctag
     4621 atgtatattc taaaaataaa tttatctcga tttttatgta cggtaattat ttacgaataa
     4681 aacatttgac gaagaatttg acgataatga cgaaaagccc taccgatttg acgaatatct
     4741 tgacgaaact attcaacgat t
//
LOCUS       DATIAS010000627         3147 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1749050, whole genome shotgun sequence.
ACCESSION   DATIAS010000627 DATIAS010000000
VERSION     DATIAS010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749050"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(758..1642)
                     /locus_tag="VLA74_12760"
     CDS             complement(758..1642)
                     /locus_tag="VLA74_12760"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSF51624.1"
                     /translation="MNQIHIGCSGWSYPDPPEIGGWTKVFYPNSQTKRLYYYSQFFDT
                     VEMDSTFYEKFYKDMTKYTFIGMDKATHDNKDFEFSVKVPETITHIKKLDVEKGAIAS
                     FEEFLDKISPLKIANKLGAILIQLPPSFTVTDFKNTENFLDNLPSGYQYAVEFRHPSW
                     NTEGPWEMLKHYDIAAVMTDSPLSDNLQFLSKVTITSKNHSFIRFHGRDSRHRYNYLY
                     STEELKPWVNKVKEEIISKTDTLLRIYFNNHYGAKAVINAFEFKKMLGISLSKRETNA
                     LKFAKSYYSRPPSTFEYI"
     gene            complement(1694..2011)
                     /locus_tag="VLA74_12765"
     CDS             complement(1694..2011)
                     /locus_tag="VLA74_12765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51625.1"
                     /translation="MFKFDSAFVYMVNKGSEGNKLQTKLKHYQDEMIKVSEERAHYQQ
                     ELEYIRYQMKKALDENEFYKQRIKVLEEEKIKLRNENERLNKENNDLIGQLKVIKKIT
                     EGY"
     repeat_region   2258..2553
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=2258..2287
                     /rpt_unit_seq="gttttaatcgaactattataggattgaaag"
     gene            complement(2621..2770)
                     /locus_tag="VLA74_12770"
     CDS             complement(2621..2770)
                     /locus_tag="VLA74_12770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51626.1"
                     /translation="MNKTANNNTTIMTFQQQSQLDITKANCLFQIITPYSKGLTQAEI
                     AQRGK"
BASE COUNT         1006 a          461 c          447 g         1233 t
ORIGIN      
        1 atgtagttgt tgtagcgatt tatcatatat cgtttgtcta aataatcgaa atgttctttc
       61 tattgttgat agatcacatg atacataaaa tctaattcta tatgcaggta ctcctaatgt
      121 aaatagataa agcaagtgta tatgatattg ctaagcgatg ttcttgtctg tccgcgagat
      181 atgtacctgt aaattcacta aaattatatc tgcaacgttt acagccatac ctatttgatt
      241 tcagataata tagaaatcta tacctacatc catctaggac atattctttt tccattccat
      301 ctaagattac gaaaatatat actacttttc ttattgcttg atgctaggtc tattggatca
      361 tatttacgca cgaaatatgt ataaaataag atatcatgtg tttatttttt gctccaaatg
      421 tacaggtatt accttttcta atccttccca tctttttctt tcttggtgca tctttaaaca
      481 gcaatgcttg tattttaatc tactaccaca ttgacaagga tcgtttctat ttaattccaa
      541 tttggataaa taatacatag aattcttttg atttaaaaat attttttata cgtgctaaat
      601 cctaattgct acacatattt actccactct aatattaaaa caccagtaat gggactcgaa
      661 ccctgcaact tcattcttgg gtttattatt taatataatt caaggaaagc tagatctctg
      721 acttttctaa atgtaccaca attagaaaaa caaatttcta aatatattca aaagtagaag
      781 gaggtcttga ataataactc ttggcaaatt ttaatgcatt tgtttctctt ttagatagag
      841 atattcctaa cattttttta aattcaaatg cattgataac tgctttagca ccataatgat
      901 tattgaaata aattcttagt agagtatcag ttttactaat tatttcttct tttaccttat
      961 taacccatgg tttcaattct tctgtagaat aaagataatt gtatctgtgt cttgaatctc
     1021 ttccatgaaa tcgaataaat gagtggtttt ttgaagttat tgtaaccttt gatagaaatt
     1081 ggaggttatc tgatagtggt gaatcagtca ttactgctgc aatatcataa tgttttaaca
     1141 tttcccatgg accttctgta ttccacgatg gatgtctgaa ttctactgca tactgatacc
     1201 ctgaaggcaa attatcaaga aaattctcag tatttttaaa atcagtaaca gtgaaactag
     1261 gtggtaactg tataagaata gcaccaagtt tatttgctat cttcagaggt gatatcttgt
     1321 ctagaaattc ttcaaatgat gctattgctc ctttctctac atctaatttt tttatatgtg
     1381 taatagtctc aggaactttt acagaaaatt caaaatcctt attatcatgt gttgccttat
     1441 ccatcccaat aaatgtatat tttgtcatat ccttgtagaa tttttcataa aatgtagaat
     1501 ccatttctac tgtgtcaaag aattgagaat aatagtaaag acgttttgtt tgactgttag
     1561 gataaaatac tttggtccag cctcctattt ctggaggatc tggataactc cagcccgaac
     1621 aaccaatatg gatttggttc aatgttgatt ataagaagta tatataaata aataaataca
     1681 atcaaaataa gctttaataa ccttcagtaa tttttttaat aacctttaac tgaccgatca
     1741 agtcattgtt ttctttgttc aatctttcat tttcatttcg caattttatt ttttcttcct
     1801 ctaatacttt tatcctttgc ttataaaact cattctcatc taatgctttt ttcatttggt
     1861 aacgaatata ctccaactct tgttgataat gtgctctttc ctctgatact tttatcattt
     1921 catcttgata atgttttaat tttgtttgta acttattacc ttctgatcct ttatttacca
     1981 tgtatacaaa tgccgaatca aatttaaaca ttatattatg taaaatcata actcaaagct
     2041 ataattattt tatagagatg taaaaatttt tacctcagtt gactcaacaa caatagactt
     2101 gtaaaagaca gaacattaaa taaaatgatg ataggatcga cagaaaatat aatattatag
     2161 tcagcattta taaatagaaa gcaacacctg aggttgacca gttcttcttc gatataatcc
     2221 ccagaggtta tgagtgaaaa gaggagtctc ttggggggtt ttaatcgaac tattatagga
     2281 ttgaaagatc gatatattct gggaaatggt aaacgttgga acagttttaa tcgaactatt
     2341 ataggattga aagtactttg gtagtatgtt acgattgaat ttgtgttctt gttttaatcg
     2401 aactattata ggattgaaag agggacatgg ttctgaatca gtggataagg gatatggttt
     2461 taatcgaact attataggat tgaaatgggg aagttaagtt gcctgggact tggggggagt
     2521 gatgtttgaa tcgtactatt ataggattga aagttaatca ggatattctt tttagcttct
     2581 tgttgcaaat attgtatatc ccgactaata gttgattgat ttactttcct ctttgtgcaa
     2641 tttctgcttg tgtcaacccc ttactatatg gagtaattat ttggaataga caattcgctt
     2701 ttgtaatatc taattgtgac tgttgttgaa aagtcataat agtagtatta ttattagcag
     2761 ttttattcaa attattattt tttatactat ttttaataat attttatttg ttgttattgt
     2821 tatcttctac ttttgtaact ttatcaattc attatcagct ttatacatga ttgtacctat
     2881 attatgcaat tatatataat agtcatagaa atatttaatt catttatttc tattatttta
     2941 tatcacaata ataatactta attgttttaa aagaagaaaa ttttttgata tagttgttta
     3001 tgaatcagga aaaaagtctt ttccaatcta taggtaacat actatattta tttgctgatt
     3061 ctttaggtaa tacttcatag cactctctaa aatcatctgg cagatctaac catcttctta
     3121 gcccattaag tatatctata agatttg
//
LOCUS       DATIAS010000628         3121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_933383, whole genome shotgun sequence.
ACCESSION   DATIAS010000628 DATIAS010000000
VERSION     DATIAS010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933383"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..631
                     /locus_tag="VLA74_12775"
     CDS             125..631
                     /locus_tag="VLA74_12775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51627.1"
                     /translation="MSNTRDDRDSVHIQAGGDVIGTNVKGDKNIIGKNISTTNTNIQQ
                     IAIDEQILKKLYGEYSRAFTQVENSLNEILKESKDIQPQEITEIQTSLEDLAKESEDL
                     TPDKKPAELKKQRWKEKFKIFAKHTIKALPKTAATLALFTPITAPFSETIEEGLQHVV
                     EGMQEVLK"
     gene            complement(1024..2805)
                     /locus_tag="VLA74_12780"
     CDS             complement(1024..2805)
                     /locus_tag="VLA74_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51628.1"
                     /translation="MVTYTLLVILTLLDTHFNQKTYGQSTSFIRQEILDPIGDWELWK
                     GFSPFVEISTHDNFMIPIPIAKNKSECMTDSNKFYSPDIESVSYVSDGKKLNASLWLA
                     TPLYESPINDTLDKFQESLKLDIQNEKNLSLDNFTFIRTIELDLSNEEVSDATLGGMP
                     AKYIKYNPEGDPDKIMTEIWTVANANKKIYHFKFLALSSTFDIYNDTVNEILNSFHII
                     DNDLNNKSAIYNIAKDKFLNYTNNEFSITYPPDWNLTPNTRYSSNNSSEFILQSPFED
                     TKYDEPPWHETFFTLAIDLNSVHDAGTDYRIVNLRIPHDGKWNGGNWTQQIREISAYD
                     KNNLLKENEYKWFKDKKKIGSEIDLVPFSVNLTDLNFPKDYKFLLYITDNFVINHKFC
                     RMVDTSNWVMVPPPDFSITAQPSSVSLRPGEKSAISLEINGNSALQSEAKLTVHSNNP
                     GISAYFIPNTTNIPSLSSGNSILNVNVKEDIKNDTPSPVVLQVIANISFPNSITNRGG
                     ETFSNTMSVSVPTSSNLTLTILPKLTWQQNLSNFTNDIISPLSGLWTFLAGIGAVIVP
                     LILRVYNKRKKEKNIIDKNNLEKSSPF"
     gene            complement(2883..>3121)
                     /locus_tag="VLA74_12785"
     CDS             complement(2883..>3121)
                     /locus_tag="VLA74_12785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51629.1"
                     /translation="SKIEALYELARYEECNKVSNDALSLDPDNKQANYYKGMALIGLN
                     KKFDAEKFLSKSDGKDEEKSLRVGKPSIADVAPI"
BASE COUNT         1085 a          455 c          473 g         1108 t
ORIGIN      
        1 tcaaagatca tctacgtttt caagttttga ttgcgaaatc aagataatag atattttcca
       61 attttaggaa tcaactacaa attgtacaat atatttttat actattagat aaagtcttga
      121 atttatgtct aacactcgag atgatcgaga ttcagtacat attcaagcag gaggagatgt
      181 gattggcaca aatgttaaag gagataaaaa tatcataggt aaaaatatta gtacaacaaa
      241 cacaaatatt cagcagatag ccatcgatga acaaatactt aaaaaactct atggagaata
      301 ttcaagagca tttacacaag tcgaaaattc tttaaatgaa atactaaaag aatctaagga
      361 tattcaacct caagaaataa cagaaattca aacaagtcta gaagatctag caaaagaatc
      421 agaagatcta accccagata aaaaaccagc tgaattaaaa aagcaaagat ggaaggaaaa
      481 gttcaagatc tttgcaaaac atacaattaa agcattacca aaaactgctg caacattagc
      541 tttgtttact ccaattacag ctccatttag tgagactata gaggaaggat tacaacatgt
      601 tgttgaaggt atgcaggaag tattgaaata actaatcatt atgaaagaat atgattaatt
      661 aattaccact ctatgtctta ataatttatg atttaaaata gaaaattttt atattataaa
      721 agagttatac gatcattcaa aattggatac tatgagtagg actcgtgtcc atcccttata
      781 ttcttgaatt tggttttatt attgttctga aaattttaat cattcaaaga atttcttatt
      841 taagatttga ttcaactttg taatattaaa ttcttaaaaa tgttgactcc acgagtttgg
      901 cgcctggagt gggactcgaa ccctgcaatt acattcgcgg gtttatatca tttgaatatt
      961 ctaaaagatt aaatgaaatt ttaccatgat aaggcatttt cttaaagcta tttggttaat
     1021 tgactaaaaa ggagatgact tttcaagatt atttttatcg ataatatttt tttctttttt
     1081 tcttttatta tacactcgaa ggataagtgg tacaataact gctcctatac cagctaaaaa
     1141 tgtccaaagt ccactgaggg gcgatattat atcatttgta aaattagata aattttgttg
     1201 ccaagttagt ttaggtaaga tagtcaaggt gaggtttgac gaggtaggta cacttacact
     1261 catggtatta gaaaatgttt ctcctcctct attcgtaatt gaatttggaa aagaaatatt
     1321 tgcaataact tgtaaaacaa caggtgaagg tgtatcattt ttaatatctt ccttaacgtt
     1381 cacattcaat atagagtttc cagaagataa agaaggaata ttcgttgtat ttggaataaa
     1441 ataggcacta ataccgggat tattactgtg tacagttaat ttagcttctg attgaagagc
     1501 agaattaccg ttgatctcta aagatattgc agatttttct cctggtctaa gtgaaacaga
     1561 agatggctga gccgttattg aaaaatcagg tggaggaacc ataacccagt tacttgtatc
     1621 aaccattcta caaaatttat gattaattac gaagttgtct gtaatatata gaagaaattt
     1681 gtaatctttt ggaaaattca gatctgtcag atttacggaa aaaggaacta aatctatttc
     1741 tgaacctatt ttctttttat ctttaaacca tttgtattcg ttttctttta ataaattgtt
     1801 tttatcataa gctgatattt ctctaatctg ttgtgtccaa ttaccaccat tccatttacc
     1861 atcatgaggt attcttaaat taactatccg ataatcagtt cctgcatcat ggacagaatt
     1921 taaatcaatt gccaaagtaa aaaaagtttc atgccagggc ggttcatcat atttggtgtc
     1981 ttcaaatgga gattgtagta taaattctga ggaattattg ctagaatatc ttgtattcgg
     2041 tgtcaaattc caatcaggtg gataagttat actgaactca ttattagtat agtttagaaa
     2101 tttatcttta gcaatgttat aaattgcaga tttgttattt aaatcattat ctataatatg
     2161 aaatgaattc agtatttcat ttacggtatc attataaata tcaaaagtgg aacttaaagc
     2221 taaaaattta aaatgataaa tttttttatt tgcatttgct acggtccaaa tttcagtcat
     2281 gattttgtct ggatctcctt ctggattata ttttatatat tttgcaggca ttcctccaag
     2341 tgtagcatca ctaacttctt cattagacaa atccagctct atagttctaa taaaagtaaa
     2401 attatctaaa gaaagattct tttcgttttg aatatctagc ttcaaacttt cttgaaattt
     2461 atcaagtgta tcgtttattg gagattcata taatggggta gctaaccata gtgatgcatt
     2521 tagtttttta ccatcactga cgtaacttac tgactctata tctggcgaat aaaatttgtt
     2581 actatctgtc atgcattctg atttattttt tgcaatggga ataggtatca taaaattatc
     2641 gtgtgttgat atttcaacaa atggtgagaa acctttccat aattcccaat ctcctattgg
     2701 atccaggatt tcttgtctaa taaatgatgt agattgtcca taggtcttct gattgaaatg
     2761 agtgtctaac agtgttaaga tcacaagtaa tgtatatgtt accaaacaaa gctgagtaaa
     2821 ataaagaatg ctaatcttct taattctttt caaattaatc ttaaaagaaa aacaacaata
     2881 tattaaatcg gggcaacatc tgcgatactg ggttttccta ctcttaaact tttctcctcg
     2941 tcttttccat cacttttact caaaaatttt tctgcatcaa attttttatt taaacctatt
     3001 agtgccatac ctttataata atttgcttgt ttattatcag gatcaagtga caaggcatca
     3061 tttgaaactt tattacattc ttcgtaacgt gctaattcat aaagggcttc tattttactg
     3121 a
//
LOCUS       DATIAS010000629         4661 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1069285, whole genome shotgun sequence.
ACCESSION   DATIAS010000629 DATIAS010000000
VERSION     DATIAS010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069285"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(335..1390)
                     /gene="rtcA"
                     /locus_tag="VLA74_12790"
     CDS             complement(335..1390)
                     /gene="rtcA"
                     /locus_tag="VLA74_12790"
                     /inference="COORDINATES: protein motif:HMM:TIGR03399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003963 - RNA-3'-phosphate cyclase
                     activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HSF51630.1"
                     /translation="MLKIDGSFGEGGGQILRSTICLSVLLEKPVEIFNIRSKRPNPGL
                     RPQHVHAVKALSTIFNATVENLCVGNQIIKFYPNSLHMDKGITELEIDIGTAGSIPLI
                     LQTIVPAISLSKKNISIKIIGGTDVIASPTIDYMKYVVSEVYKNIGIIFKIDVIRRGY
                     YPKGGGIVQTKILPCKNLGLIDLISGQRSEPIVIGVCSRLPRHVLDRQISTVLLHLEK
                     NGIRCNNYIASVENAISPGSSILVYTKSDFGQFIGGDAVGQKNKSAEDVGKEAVTKFL
                     ENYIKNVPVDHNLADMLVIPASLARGNSRFVIGKVTEHLKTNLYIVSKMVGCKYSITP
                     IQEKFLVNIEGKSDVNI"
     gene            2596..2850
                     /locus_tag="VLA74_12795"
     CDS             2596..2850
                     /locus_tag="VLA74_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSF51631.1"
                     /translation="MPTAYVLINCDLGSEADIIKELKKLPEVVEVSGVFGVYDIIVRI
                     RSDSMDKLREVVTWNVRRIDKVRSTLTMMVIEGQGEKDIN"
     gene            2961..3593
                     /locus_tag="VLA74_12800"
     CDS             2961..3593
                     /locus_tag="VLA74_12800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51632.1"
                     /translation="MDNIFDNFLTDNGLNTLLFYNPYPKLCFTSMMTSFFKKTIYLDL
                     DTTFTAYANSGFILNYSPKTILLVTPDEGELESLLDRIISNSTTSSLIIIDSLNSFYN
                     LYYKKIDWNYFKGISNVQHILSNFLMLLLKHCNSIKIPILVTSMMRYKKKENWVRLPA
                     NRRFLQKKSDVVFYVDMLNENDLSVDILVHPFLSTKKLVVKNCEISIVCI"
     gene            3697..4131
                     /locus_tag="VLA74_12805"
     CDS             3697..4131
                     /locus_tag="VLA74_12805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51633.1"
                     /translation="MANPYILNQLLLVIIILSVLFDLHISSSQEYKINDLLSLDVKIL
                     KNPINLAEEQIIRFLLNDNTLNNKINQTALIEGNIIYLSGIAQPFSLNITPSKWYNYS
                     WTINPDIQKFGTVLVEINLLYNESKINMQNITFNISNEKNTK"
     gene            4393..>4661
                     /locus_tag="VLA74_12810"
     CDS             4393..>4661
                     /locus_tag="VLA74_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF51634.1"
                     /translation="MKNRSRNEIIAFILESVSNSKSNDGITATKIMYSAFLSYSQLKE
                     YLALLLEKNLLEYKSNTQTYKVTFKGIHYISIHKRLTEMIIITPQ"
BASE COUNT         1745 a          659 c          617 g         1640 t
ORIGIN      
        1 tatcaattta aggaagacta ttacaattta tttgtttaac aacatttaaa atttaatagg
       61 ttttatatta ttttttaaaa acgtcaaacc tttaaaaaac tattttaaaa acatgaatta
      121 atgtcgctgc ttttcaacac atcttcccat ctgacttttc tcatgctttt tcagatggct
      181 aatacaacca ataaatttat gttcagtaca tccacaaata atacatcttc tgattttctg
      241 actgttttcc aattcaaaaa tataatacta ttgacaatat tagtttgttt tcttattcga
      301 acattgttaa taatttattg aaattaaaaa ttttttaaat gttaacgtct gatttacctt
      361 caatattcac taaaaatttt tcttgaatgg gtgtaatact atatttacat ccaaccatct
      421 tactaactat gtatagattt gtttttaaat gttctgtgac tttcccaata acaaatctag
      481 aatttcctct agccaagcta gcgggtataa ctaacatatc tgccaagtta tgatctacag
      541 gcacattttt aatataattt tccagaaatt tagttactgc ctcttttcca acatcctcag
      601 cacttttatt tttttgtcca accgcatctc cacctataaa ttgaccaaaa tcagattttg
      661 tataaactaa tattgacgat cctggagaaa tagcattttc aaccgatgct atatagttat
      721 tacatcttat accatttttt tctagatgta atagtacagt agaaatttga cgatccaaaa
      781 catgtctagg aagtctagaa caaacaccta taactatagg ttcacttctt tgaccgctaa
      841 ttaaatcgat cagacccaag ttcttacaag gtagtatttt agtttgaact attccgcctc
      901 ctttgggata atatcctctt cttataacat ctattttaaa aattattcca atatttttat
      961 atacttcaga gacaacatat ttcatataat caattgtagg acttgcaatt acatctgttc
     1021 ctccaataat tttgatacta atattttttt tagataatga tattgctgga actattgttt
     1081 gtagtatcaa gggaatgctt ccagccgtac caatatcaat ttctaattca gtaattcctt
     1141 tatccatgtg caaactattg ggataaaatt ttataatttg gtttcccaca cataggtttt
     1201 ccacagtagc attgaaaatt gtactcaaag ctttgaccgc atgaacatgt tgaggtctca
     1261 aaccgggatt tggtcttttg gaccgtatat tgaatatttc tacaggtttt tccagaagta
     1321 cagaaaggca tatagtagaa cgaagtattt gtcctcctcc ttctccaaat gaaccatcaa
     1381 tctttaacaa taatcaaatt tttactatca ataaaataat aattttaccc taaatatgaa
     1441 aatatgtgtt attacatctc actattccaa cacaattagt agaaactatt atggtcataa
     1501 tacatgatta atttgaaata aagattctct cgtaaagaca ggagaaatat tacttgaatt
     1561 tgatgttatt gataattgga ttatgaattg gaaagatgaa ttaggataaa gaaaaagcta
     1621 gaaggtttgt acatcagatt catttatgaa attattgtag tacagagaac atacatatat
     1681 tcacttacct aacatagaag aagaccagaa ggtttagtta ctagctcact ctaccaaata
     1741 caattcagtt ccatcaattc cagatcatag taacattagc agaagaagat acagattaga
     1801 tatcaaaaaa taagcaagga caaatctatc tacatgatgg ttattttgta atagctattg
     1861 attgtactga tgtaaagata tccaagcaaa gagaatgaat acgtcaagta gactgtgaag
     1921 agaggatatc tagagataca tgtagcagtt gatatcaata gaaatagagt cttataatta
     1981 aaagtaacta gtaaacaggt acatgataga aaagtattgc cagagctgat aaatgatatt
     2041 agataaagaa taacaagata ataaaagata ctattattat ggatggctcc tatgacaata
     2101 acaagaattt tcaatttcta ttatttaaag agataccacc ggcaataata agggtaaaaa
     2161 agaattgcag atgtaaaatt actaatcatc gcgtcataaa caaggttgta aaaagtacag
     2221 aaaaataaat tacaggaatg ctggaaagaa tggtactata gtgtcagaga tggatgacag
     2281 aagaaactgt tttcttttgt atcaaaagaa tgttcggaca atatgtttcc gctattcgat
     2341 ttgagaatac ctaaaggaga taatactgaa agtatcattg tataacttgc tcattagaag
     2401 tataagtgtt acatgattac tgattattga tagaaaatga tgattattta gatgagttgt
     2461 acaacagagc agtaaaaata tattgtcatc aaaataatta attttcaaaa aatatttctt
     2521 ataggagtac tcattctaca tttcttgaat ttaaagacta aaaggattaa tagatgaata
     2581 taataatatt ttgtaatgcc aacagcatat gttttaataa attgtgattt aggatctgaa
     2641 gcagatatta tcaaagaact aaaaaaattg ccggaagttg tagaggtcag tggagtattt
     2701 ggagtttacg acataatagt aagaatccgc tctgattcaa tggataaact acgtgaggta
     2761 gttacatgga atgtaagaag gatagataaa gttagatcca ccttgaccat gatggtaata
     2821 gagggccaag gagaaaaaga tataaattaa aaaggtcata aatcaaaagt caattatacg
     2881 ctatcttttt atattttctt gtttttcaaa ttttcgcgtt gacattatca ttttatatta
     2941 ttaattattt taattagtag ttggacaata tttttgataa tttcttgact gataatggat
     3001 taaatactct attattctat aatccatacc caaaactttg ttttacatcc atgatgacct
     3061 ccttcttcaa aaaaacaatt tacctagatc ttgatacaac ttttactgcc tatgccaatt
     3121 cgggcttcat cctaaattat tcaccaaaaa caatcttact agttacccca gacgaaggag
     3181 aattggaatc tctattagat cgaataattt ctaatagtac aacatcctca ttaattatta
     3241 ttgattcatt aaatagcttt tataacttat attataaaaa aattgattgg aattatttta
     3301 agggaatttc taatgttcaa catatcctat caaactttct aatgctactt ttgaaacatt
     3361 gtaattctat aaaaattcct attcttgtta caagcatgat gagatacaaa aagaaagaaa
     3421 actgggttag gttgcctgca aacagaaggt ttttacaaaa aaaaagcgac gtagtatttt
     3481 atgtagatat gcttaatgaa aatgatcttt ctgttgatat acttgtccat ccttttctat
     3541 ctactaaaaa attagttgtg aaaaactgcg aaatttccat tgtatgtatc taattttgat
     3601 aaaatatcat tctaatttct tgtcaaatta atttgacaaa tcagcatttt tttacgttaa
     3661 gatttatagg attctttaat tctactaggt ttgtctttgg ctaatcctta tatcttgaat
     3721 caattattac ttgttataat aatactatca gtattatttg atctacacat ctcatcttct
     3781 caagagtata aaattaatga tctgctgtca ctagatgtta agatattaaa aaatcctatc
     3841 aatctggcag aagaacaaat aattcgattt ttattaaatg ataatactct aaataataaa
     3901 attaatcaaa ctgctctcat agaaggaaat ataatttatt tgtcaggaat cgctcaacca
     3961 ttttcattaa atattactcc ctcaaaatgg tataattatt catggacaat aaatcctgat
     4021 attcaaaaat ttgggacagt tttagtagaa ataaatttat tatataatga atcaaaaatt
     4081 aatatgcaaa atattacatt caatataagt aacgaaaaaa atactaagta attcgtaaat
     4141 attttcaaaa tgattatcat ttatttgcag aagaatgagt ttttttaaca tattaatttg
     4201 tatttgatta aggataataa cctgtttaat tgaatttaat ataaaatatt ataatattat
     4261 acttaagtat cttgaatagc tttgaagagt catggataaa atacttggag aatttaaaaa
     4321 acctctattc tatctatttt tttaaattaa atctttctta aagttaacat attattataa
     4381 atattaataa acatgaaaaa tagaagcaga aatgagatca tagcttttat tctagaatct
     4441 gtttctaaca gtaaaagcaa tgatggtatt acagctacta aaatcatgta cagtgcattc
     4501 ttatcttatt cacaactgaa agaatatctt gcattactat tagaaaagaa cctattagaa
     4561 tataagtcta acacacaaac atataaagta acctttaaag gtatacatta tatatctatt
     4621 cataaacgat tgactgaaat gataataata actccacaat a
//
LOCUS       DATIAS010000630         2499 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1206751, whole genome shotgun sequence.
ACCESSION   DATIAS010000630 DATIAS010000000
VERSION     DATIAS010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1206751"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VLA74_12815"
     CDS             complement(<1..416)
                     /locus_tag="VLA74_12815"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HSF51635.1"
                     /translation="MQVKHSYVDKILSGDCKEIISKIPNRSIQLTITSPPYRNAIDYN
                     AHISKNGSYYRGKLNVNTKEYLDEMIDIFNDKIYNATKDGGYCCIVIANEVVNGTLLP
                     LPHMLLSQLVEPFGKWNLHEEIIWHKVTGGTNRYGS"
     gene            complement(575..1639)
                     /locus_tag="VLA74_12820"
     CDS             complement(575..1639)
                     /locus_tag="VLA74_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase II"
                     /protein_id="HSF51636.1"
                     /translation="MEKERNKELIIAPPSTIPNLELFLDELKEINTLFIDPTKIKRKK
                     NFKIIYESELADIVICKSIEDLIKNKTKGKSLAYYKKVLSNEDISDIENAIYKGANYI
                     IVDAANWKIIPLENIIANLQNTKTRIYTTAKNSEEVRTMFTVLELGVDGVILSTANNK
                     EIEESKKYLKNKKYEIKACEIVDVKDVGIGERVCVDTVSMLETGEGMLVGSKSNFLFL
                     LHNESSGSSFTSPRPFRVNAGAVYCYTVLPDGKTKYLSELESGAEIIIVNKDGNSRVV
                     SVGRSKIETRPLKLIRAVAGNMEGTVIVQNAETIQLIRDNGELVPVTYLKPGDKILAY
                     FKRASGRHFGVEVQEYILEK"
     gene            complement(1620..2414)
                     /locus_tag="VLA74_12825"
     CDS             complement(1620..2414)
                     /locus_tag="VLA74_12825"
                     /EC_number="2.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate
                     synthase"
                     /protein_id="HSF51637.1"
                     /translation="MVSGRDIRLNRITKKGKMVCIPMDHGITNGPIKGLENTHEMIYQ
                     CENSGLTSVIINKGIIKSMPKTTNIGLITHVSASTSLSPYPNKKVLMGSVADAVRHGS
                     DAVSVHVNIGAKEEPEMLEILGMISDECDEWNVPLLAMMYPRGENIKNPYDPEIVAHV
                     TRIGAEAGADIVKSVYTGDLDSFKSVVKYCPVPVVIAGGPKSKTDADVLEMCSNAIKA
                     GAKGVTFGRNIFQHNNPSLLVKALSEIIIDGKNYNEVLKTFGKRKK"
BASE COUNT          809 a          434 c          322 g          934 t
ORIGIN      
        1 aaggaaccat atctattagt tcctccagta actttgtgcc aaatgatttc ttcatgaaga
       61 ttccatttgc caaatggttc aactaattgt gataacaaca tatgtggaag tggtaataat
      121 gtaccattta caacttcatt agctataact atacaacaat atccaccatc tttggttgca
      181 ttgtatattt tatcattaaa gatatcaatc atttcatcta gatattcttt tgtattgaca
      241 tttaattttc ctcgataata agatccattt ttagatatat gtgcattata atcaattgca
      301 tttcgataag ggggagaagt tatggttaat tgtatggaac gattaggaat tttagaaatg
      361 atttctttgc aatcgccaga taaaatttta tctacatagc tatgctttac ctgcataata
      421 gaacataatt tttgaatcaa tattcaccat gctttaaaat aatcgacaat atgataaaga
      481 aattttgaat cacaaatgta taatatacat atatcatgaa ataaattaaa caatttgaaa
      541 taacaatttg gatcattaga aatagaagta attattattt ttcaagaata tattcttgta
      601 cctctactcc aaaatgtctt ccactagctc gtttaaagta tgccaaaatt ttatcaccag
      661 gtttaaggta agtaactggc actaattctc cattgtcacg aattaactga attgtttctg
      721 cattttgtac tataacagtt ccttccatat tgccagcaac tgccctaatt aattttaatg
      781 gcctagtttc tatttttgat cttcctacag atacaactct agaattgcca tctttattta
      841 caataattat ttcagctcca gattctaatt cagataaata tttggttttc ccatccggaa
      901 gaacagtata acaatataca gctccagcat taactctaaa agggcgtggc gaagtaaaag
      961 atgaaccaga tgattcattg tgtaaaagaa atagaaaatt agacttactt ccaactaaca
     1021 taccttctcc tgtttcaagc attgaaacag tatcgacaca cactctttct cctattccaa
     1081 catctttaac atctacaatt tcgcaggctt ttatttcata ttttttattt tttaaatatt
     1141 ttttagattc ttctatttct ttattatttg cggttgacag tataacacca tcaactccta
     1201 attctaacac ggtaaacata gttcttactt cctctgaatt tttagcagta gtatagatcc
     1261 tcgttttagt attttgtaga ttagcaatta tattttctaa tggaattatt ttccagttag
     1321 cagcatctac tataatataa tttgcacctt tatagattgc attttctata tcagaaatat
     1381 cttcatttga tagaactttc ttataatatg ccaaggattt accttttgtt ttatttttga
     1441 ttaaatcttc tatcgatttg caaataacaa tatcagcaag ttcagattca taaattattt
     1501 taaaattttt ttttcttttt atttttgtag ggtctatgaa taatgtatta atctccttta
     1561 actcgtctaa aaataattct aaattaggaa ttgtagaagg tggagcaata attaattctt
     1621 tatttctttc tttttccaaa ggttttcaaa acctcattat agttttttcc atctataatt
     1681 atttcagata atgcttttac aagtaaagaa ggattattat gttgaaaaat attccttcca
     1741 aaagtaacac ctttagcacc cgctttgata gcatttgagc acatttctaa aacatcagcg
     1801 tctgttttag attttgggcc acctgcaatg acaactggta ctggacaata ttttactact
     1861 gatttaaaag aatctaaatc cccagtataa acagatttga ctatatcagc acctgcttct
     1921 gcacctattc tggtaacatg ggctacaatt tctggatcat atggattttt tatgttttcg
     1981 cctcttggat acatcatagc tagtaagggc acattccatt cgtcacattc atcagagatc
     2041 atccctaaaa tttctaacat ttccggctct tctttggcac ctatatttac atggacagaa
     2101 acagcatcgg atccatgtct aacagcatca gcaacactac ccataagaac ttttttattt
     2161 ggataaggac ttaaagaagt actagcagat acgtgtgtta tcaatcctat attagtggtc
     2221 tttggcatag actttattat ccctttgtta ataattacag acgttaatcc agaattttcg
     2281 cattgatata tcatttcatg agtattttct aatcctttta tcggtccgtt agttatccca
     2341 tgatccatcg gaatacaaac cattttgcct ttttttgtaa ttctgtttaa cctaatgtct
     2401 ctacctgaga ccatagagat gaaggatatt tgtcctactt aaaagtgatc tgctatctag
     2461 cgaaaaacat tactaaataa acaagtaaat aaaaataat
//
LOCUS       DATIAS010000631         2783 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1612776, whole genome shotgun sequence.
ACCESSION   DATIAS010000631 DATIAS010000000
VERSION     DATIAS010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612776"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            348..1802
                     /locus_tag="VLA74_12830"
     CDS             348..1802
                     /locus_tag="VLA74_12830"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSF51638.1"
                     /translation="MNSESVFDLIVIGTGSAASAAAFECRSKGWNVAIIDSLPFGGTC
                     ALRGCDPKKVLVEAAKIVDSNQRHENKGIIGSQEIHIKWSDLIRFKRTFTKPFPEHRE
                     NGYIKAGINVFHGHAKFIGRNNIQVEENNNNNNTNKITVLNSKYILIATGAKPMNLNI
                     LGSENIITSDDFLEFDGNHLPDRIVFVGGGYISFEFAHIAARAGVKKITILHRGKQPL
                     EHFDPDLVNQLIQRSRDVGINVQLGRTVKKIEKLSDFKLQVVHSNSNVLDTSLTTTEE
                     KMISDEQIEEADLVVHGAGRIPNIEGLNLIAGNIEHTDGRGIKVNEYLQSISNPSVYA
                     AGDVADSGGLPLTPVASYEGVIVANNLINGNTLKSNYAGLPSVVFTIPSLTSVGMQEK
                     EAKQKGLQFRTKYEKTDSWASSKRVGETCSGFKVLIEKDTDRILGAHILGPHAEEVIN
                     IFSLAIRLGLSTKDLKDPILYSYPTNSSDVVYML"
     gene            complement(2495..>2783)
                     /locus_tag="VLA74_12835"
     CDS             complement(2495..>2783)
                     /locus_tag="VLA74_12835"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /protein_id="HSF51639.1"
                     /translation="NDTNRKEPTVSPLQASLEQLSGLPPTLIIVGENDVLRDEGEAYA
                     HKLMQAGVPITATRYLGAIHDFMMLNPISDTPAARGAIDQASHTLKELFSK"
BASE COUNT         1013 a          403 c          484 g          883 t
ORIGIN      
        1 agatggatgt ggttacagag aaaagcaata aacaactcta catttagaaa tgaatctgat
       61 attggaaaag cagtatctga ttggacatgt aactacaata actctcatca tggcaatata
      121 actagagata gtttacataa tgaactcatg tgtttgttca catgactttt aacctatatc
      181 tatttttcat gtatttgtaa caatcctaga cagaagtcga agggtttact gcaatgtatt
      241 ttagaatctc tatttttgta tctcccatct ctaagtcttt tacttcttta ggtgtaagta
      301 gagataacaa atattttttt atattttcta cgaacttata tcatagaatg aatagtgaaa
      361 gtgtattcga tttaatagtt ataggaacag gatcagcagc atcagcagct gcttttgaat
      421 gtcgatcaaa aggatggaat gtagctataa tagattcttt accatttgga ggcacatgtg
      481 cattacgtgg atgcgatcct aagaaggtgt tagtagaagc agccaagatt gttgactcaa
      541 atcagaggca tgagaataaa ggtataattg gttcacagga aatacatata aaatggtcag
      601 atttgatacg ttttaaacgc acttttacta aaccttttcc tgaacataga gaaaatggtt
      661 acatcaaagc tggaatcaat gtatttcatg gtcatgctaa gttcattggc agaaataaca
      721 ttcaagttga agaaaataat aataataata atacaaataa aattactgtt cttaatagta
      781 aatatattct aatagcaacc ggagcaaaac ctatgaatct gaatattctt ggatcagaga
      841 atattattac gagcgatgat ttcctggagt ttgatgggaa tcatttacct gatagaattg
      901 tatttgtagg aggtggatat atctcgtttg aatttgcaca tattgccgct cgtgcaggag
      961 taaagaagat cactattcta catcgaggca aacaaccatt agaacacttc gatccagacc
     1021 ttgtaaatca attgatccaa cgttctagag atgtcggaat aaacgttcag cttggaagaa
     1081 cagtcaagaa aatcgaaaag ctatctgact ttaagttaca agttgtacat tcaaatagta
     1141 atgttttaga cacttctcta actactacag aggagaaaat gatttctgac gaacaaatag
     1201 aagaagctga cttggtagta catggagctg gcagaatacc aaatattgaa ggactaaatc
     1261 ttattgcagg caatatagaa catactgatg gtagaggcat aaaagtaaat gaatatctcc
     1321 aaagtatttc aaatccatct gtatatgcag caggcgatgt tgcagacagt ggaggtctac
     1381 cattaactcc tgtagcaagt tatgaaggtg ttattgtagc aaataattta atcaatggaa
     1441 atactcttaa atcaaactat gccggcttgc caagtgttgt ctttactatt ccctctctaa
     1501 cctccgtagg tatgcaagaa aaagaagcca aacaaaaggg attgcaattt agaaccaaat
     1561 acgaaaaaac tgatagttgg gcatcatcaa aaagagtagg agagacttgt tcaggattta
     1621 aggtattaat tgagaaagat actgatcgaa ttttaggtgc tcatatactt ggtccacatg
     1681 ctgaagaagt cattaacatt ttctctttag ctattcgatt aggactgtct acaaaggatc
     1741 ttaaggatcc tatattgtac tcttatccga ctaactcatc agatgttgta tatatgttat
     1801 aatcaattat tatctaaata atttactgac taactataga aaatatccat cactgatgaa
     1861 aatctcatta ctacaatatt gaatatgttt caaaaaatat aaaattaaga aaattttatg
     1921 gttacaaaaa tgaaagggat aggtacaaat agatttatgc ggtataaaaa taaatagaac
     1981 taggatttgg gtaatgctga acatctatta taatgaatgt attatttcat attcagtata
     2041 aatttaaaca taatattttg aaatattaag cgagaaaatt agttctataa aatttcttat
     2101 caactcaatt tttagttata taatagtagt tgatccacaa taaaacaaaa gaagtattaa
     2161 aaactttgaa cagttcacag gtatccagac tagcaacagt agatcctgag agagggaacc
     2221 gtatattgtt ttagtagtgt ttactttttg atggtaacaa tatattcatt ccaatagatg
     2281 ataaacctaa aaatgaaaaa aatttatacc attttaaaag agtaaaaaaa tgtacaaaaa
     2341 aataccaatt gtatagcatc tttactcgcc gtagtatgtg gagttcaaat tatccaagat
     2401 ttaaaagatc attataaaca atgaaacttt taaaatctaa tatatgttcc tagaaaatgt
     2461 atttttaata attaaaataa atattggagt ttttctactt tgagaataat tctttaagtg
     2521 tatgagaagc ctgatctatt gcacctcttg ctgcaggagt atcactaatt ggattaagca
     2581 tcataaagtc atgaatagca ccaaggtaac gagttgcagt aataggaacg ccagcctgca
     2641 ttagtttatg agcatatgct tcaccttcat cacgtagaac atcattttct cctactatga
     2701 tgagtgtagg tggtaatcca ctaagctgct caagtgatgc ttgtagtgga gaaacagttg
     2761 gttcttttct attagtatcg ttt
//
LOCUS       DATIAS010000632         2183 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1612908, whole genome shotgun sequence.
ACCESSION   DATIAS010000632 DATIAS010000000
VERSION     DATIAS010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612908"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1537
                     /locus_tag="VLA74_12840"
     CDS             <1..1537
                     /locus_tag="VLA74_12840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51640.1"
                     /translation="TNISSKVDKNHNGIGNDYTLTSKDIIRQINPVVIPRISAIANMA
                     FCERATYNISFFGMESDNFTADGVIGNAIHRIILRSMTELTQSLRNNSNTIKSSHFVT
                     KKSHAKEIFIRNAQRDIRINWKHFMISNIENPLPSILDDLEIRSDRLVDQIFAEEEEN
                     KKILFRPEFTIRNTKIPLEGRLDLLKIKLAKKEREEQLNCYNENQYLNSYISSDDLVN
                     LEKESVEIIQIKTGNYRPRTAIWNLQADAEVLLLMQTLNLKKPPKYTWQFADKDGNRK
                     KFDFPKVFEIIDKYVQIWKSKISPQITGFCPKCPLRNGCLNWAFVNNNKLSENERIKR
                     NIEFNLSKRIREEVSLDDRWKAYVVLQSPEQRQREGSAITNLYIDTSSIDLDKGKIIL
                     LGDESFDKFLDFSIGEHVTISDGNPNLGSNPNAVIREIDIDRKSITLEFYRDDLYYLL
                     YDNRDKAFFTIDRFNFSSGLTSMKFLDSFFRCSSYADDIVLKEKNVSQGKNNAGIRMN
                     IIT"
     gene            1563..>2183
                     /locus_tag="VLA74_12845"
     CDS             1563..>2183
                     /locus_tag="VLA74_12845"
                     /inference="COORDINATES: protein motif:HMM:NF024642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA domain-containing protein"
                     /protein_id="HSF51641.1"
                     /translation="MNTGLTFPSFDEIENLEQKIARYRISSEKTVPVTGPPGTGKSTV
                     ISHCCFDLLKDDYFPILVTAPTNVMIDSILSKIDSLLQRMKIQLPNGFVIRYGNIANL
                     NRTYNHLTKYTFDNIVEDYCSSCYSNGYNNVYNKISIAKDFFQNARIILTTDYSAKDL
                     GNIIEVGAVIVDEAGLVGLDRMGMLFSSLRDNNGKIIVIGDDKQLPP"
BASE COUNT          837 a          285 c          362 g          699 t
ORIGIN      
        1 tacaaatata tcctctaaag tagataagaa tcataatggt attggcaatg attatacttt
       61 aacttccaaa gatattataa gacaaataaa tccagtagta attcctagaa taagtgctat
      121 agctaatatg gctttctgtg aacgtgctac ttataatatt tctttctttg gcatggaatc
      181 tgataatttt actgcagatg gagtaatagg taatgcaatt catagaatca tattaaggtc
      241 tatgactgaa cttacgcaat ctctaagaaa taatagtaat accataaagt cctcacattt
      301 tgtaaccaaa aaatctcacg ctaaagaaat ttttattcgt aatgcacaaa gagatataag
      361 aatcaattgg aaacacttta tgatttcaaa tatagaaaat cctttgcctt ctatattaga
      421 tgatttggaa ataagatctg atcgattggt cgatcaaatt tttgcagaag aagaagaaaa
      481 taaaaaaatt ctgtttagac ctgaatttac aattcgtaat accaaaattc cactagaagg
      541 acgacttgat ttacttaaaa ttaagcttgc aaaaaaagaa agagaagaac aacttaattg
      601 ctataacgaa aatcaatatt tgaattctta tatatcttca gatgatctag ttaatttaga
      661 aaaagaatca gtagaaataa tacaaataaa aacaggaaat tatcgaccaa gaactgcaat
      721 ttggaacctt caggcagatg cggaagttct tttacttatg caaacattaa atttaaaaaa
      781 acccccaaaa tatacatggc aatttgcaga taaagatggt aatagaaaaa agtttgattt
      841 tccaaaagta ttcgaaataa tagataaata tgtacagata tggaagtcaa agatttcccc
      901 acaaataact ggcttttgtc ctaaatgccc gttgcggaac ggatgcttaa attgggcatt
      961 tgttaataat aataaattat cagaaaatga gaggataaaa agaaatatag aatttaatct
     1021 ttcaaaaaga ataagagaag aggtttctct tgatgataga tggaaagcat atgtagtttt
     1081 acaatctcca gagcaaagac aaagagaagg atctgctatt acaaatttgt atattgatac
     1141 ttcatccatc gatttagata aaggaaaaat tattttacta ggcgatgagt cttttgacaa
     1201 atttttagat tttagtatag gtgaacatgt gactatttct gatggtaacc caaatttagg
     1261 gagcaatcct aatgcagtta taagagaaat tgatattgat agaaaatcaa ttactcttga
     1321 attttacaga gatgatctgt attatcttct gtatgacaat agggataaag cattttttac
     1381 tattgataga tttaacttta gtagtggttt aacatcaatg aaatttcttg atagtttctt
     1441 tagatgttct tcctatgctg atgatatagt attaaaggaa aaaaatgtta gtcaaggaaa
     1501 gaataatgca ggtatcagaa tgaatataat tacttgagac caatggggga taataaagta
     1561 aaatgaatac tggtctcact tttccatcct tcgatgaaat tgaaaatcta gagcaaaaga
     1621 tagcaaggta cagaataagt tctgaaaaga cagttccagt aactgggccg ccagggactg
     1681 ggaaatccac agttatttca cattgttgtt ttgatctttt aaaagatgat tattttccta
     1741 ttctagttac tgcacctaca aatgtaatga ttgatagtat tttatcaaaa atagattccc
     1801 ttctacaacg tatgaaaatc caattaccta atggatttgt tatcagatat gggaacattg
     1861 caaatctaaa tagaacatat aatcatctca ccaaatatac atttgacaat atagtagagg
     1921 actattgtag ttcatgttat tctaatggat ataataatgt ctataataaa atttccatag
     1981 ccaaagattt ttttcagaat gccagaataa tattaactac tgattatagt gctaaggatc
     2041 ttggtaatat aattgaagtt ggagcagtta tagtagatga ggctggacta gttggtcttg
     2101 atagaatggg aatgttattt tcctcattaa gagataataa tggtaaaatt attgtcattg
     2161 gagatgataa gcaactgcct cca
//
LOCUS       DATIAS010000633         3792 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1207321, whole genome shotgun sequence.
ACCESSION   DATIAS010000633 DATIAS010000000
VERSION     DATIAS010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1207321"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..836)
                     /locus_tag="VLA74_12850"
     CDS             complement(<1..836)
                     /locus_tag="VLA74_12850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSF51642.1"
                     /translation="MIILKELTKKFDNFTAVDNISLTIQENEVFGLLGQNGAGKTTTI
                     HMLATLLKPTSGTATINDYDIVKHPSKVRDNIGIVFQAPSSDDMLTGYENLKIYSYLY
                     NISNKDREKRILELLELVGLSERKNDLVKKYSGGMRRRLEIARGLIHRPKVIFLDEPT
                     LGLDPNSRKLMWKYIQELVREEKITVILTTHYMEEADLLCDRIGFINKGKIIAIDTPS
                     KLKSMINRKVGGDIVKLTFKNADRDNANIEVDGDNSNKFILKTIKGFDFVHDFKLDNN
                     VLT"
     gene            1057..2253
                     /locus_tag="VLA74_12855"
     CDS             1057..2253
                     /locus_tag="VLA74_12855"
                     /inference="COORDINATES: protein motif:HMM:NF016765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51643.1"
                     /translation="MSSYEDIKKRLEKYWIDYLNKNIKNFSSSISGASPPSVFVGQYG
                     YPRVNLGPMVPPLHGDTKVLDSPEMWIGKNLQEILDYRLSLVRGVNSFKVTDVNQRFI
                     TSLQELIMSSKSAESEMNFNSKPKLYSNIFSQNSSFNFESPPFGPKVDLKSFKVSSIT
                     TNKKIEYFFSDGDIKASNAVVELYKNGIEISQINKILSLGMLGKKKNRKLVPTRWSIS
                     ATDDIISSYLIKELEHNPSIDSFTVLKYNHFSNYYSVILLPSEVWNFEMVEAWYDDMN
                     KKFVLESDFEDANGLDHYPKIAGAYFAARLAIGEYLSRMKKNAAVLIFREIHPNYIIP
                     LGVWQIREGIREVLRSRSAEIFDDFQSALMYSCKDFKVSISDWINKSKLYKNYGQQLR
                     ISQFFK"
     gene            complement(2415..2771)
                     /locus_tag="VLA74_12860"
     CDS             complement(2415..2771)
                     /locus_tag="VLA74_12860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51644.1"
                     /translation="MISNGQIYFFDDQNIRGIVIMDITDFWNGQDNYRIVYLDGDSKE
                     MVSSMLEYCISFFYNYNNYYSQRDKKEQKNRFETKENRNERVQIFCPDTDFNFSVLSD
                     QKKEYFTKLILYDKEI"
     gene            complement(2808..3344)
                     /locus_tag="VLA74_12865"
     CDS             complement(2808..3344)
                     /locus_tag="VLA74_12865"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSF51645.1"
                     /translation="MIYRPAIDSDKDQIFDFCKNTFEWGDYIQEVWDCWINEKDSLLL
                     VAETMDATSSAKKIVAMIHGKLCHKNMIWVEGIRVHPEYREKGIASSLIKNILTYGKD
                     KGTTLASLIVSIDNIESRKLIKKLDFNPVSRWIYASIKGVKNIHEYCHIIKRAEIKDQ
                     ERIYNYLTGSKYRRYVNA"
     gene            3551..>3792
                     /locus_tag="VLA74_12870"
     CDS             3551..>3792
                     /locus_tag="VLA74_12870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51646.1"
                     /translation="MNTIERNFKENLNHLYEKNKLTSEQLEHFLKRGIQVIDTQKDLK
                     LKFLSSILPNIVIGASKQYISGLKIPYQATSFLAAE"
BASE COUNT         1257 a          650 c          505 g         1380 t
ORIGIN      
        1 gtcaatacat tattgtctaa tttaaagtca tgtacaaaat caaatccttt tatagttttt
       61 aaaatgaatt tgttactatt atctccatca acttcgatat tagcattgtc tctatctgca
      121 tttttaaatg ttagttttac aatatctcct ccaacttttc tatttatcat actttttaac
      181 ttcgaaggag tatcaatagc gatgatcttt cccttattaa tgaagcctat tctgtcacaa
      241 agaagatccg cctcctccat ataatgtgtt gttagtatga cagttatctt ttcttctctt
      301 accagttctt ggatatattt ccacataagt ttcctgctat taggatctaa tccaagggta
      361 ggctcatcca agaaaataac tttgggtctg tgtattaacc cccttgcaat ttccaatctt
      421 cttctcatac ccccagaata tttcttgacg agatcatttt ttctctcact tagccccacc
      481 agttctaaca actctaaaat tcttttttcc ctatctttgt ttgagatatt ataaagatat
      541 gaataaattt tcaaattttc ataaccagtt agcatatcat cgctgctggg tgcttgaaaa
      601 acgatcccaa tgttgtccct tacctttgac ggatgtttga ctatgtcata gtcattaata
      661 gtggctgtac cactggtagg ctttaacaag gtggctaaca tatgtatagt tgtagtctta
      721 cctgcaccat tctgacctaa aagtccgaat acctcattct cttggatagt tagggagatg
      781 ttatcaacag cagtaaaatt atcaaatttt ttggtaagct cttttagtat aatcaaaata
      841 taatagcaaa taatagagta ttacgtatta atcttatcaa atccccatta aattctaccc
      901 attcacgtat ctacgaacct cgtttgtcaa ttctttttcc agtctttctt atcttcaaac
      961 gaaataacat catgtatgtt atagtgaaac ttagattaaa taaatttatg atacaactaa
     1021 tataatataa aaacaatatt ttgtcaagta aaacaggtgt catcttacga agatattaaa
     1081 aaacggttgg aaaaatactg gatagactat cttaataaaa atataaaaaa tttttcttcc
     1141 agtatttctg gtgctagtcc accatctgtt tttgtaggac aatatggata tcctagagtg
     1201 aatttaggtc ctatggtccc tccactacat ggagatacaa aggttttgga ttctccagaa
     1261 atgtggattg gaaaaaatct acaggaaatt ctagattatc gtttatctct tgtacgtggt
     1321 gtaaattcct ttaaggtgac agacgttaat caaagattca tcacgtcttt acaggaatta
     1381 ataatgtctt ccaaatccgc agaaagcgaa atgaatttca actccaaacc caagttatat
     1441 tcaaatattt tcagtcaaaa ttctagtttc aactttgaat cccctccttt tggacccaaa
     1501 gttgatctaa aatcttttaa agtatcatct ataactacaa ataaaaaaat tgaatatttt
     1561 ttttctgatg gtgatatcaa agcttctaac gcagtagtag aactttacaa aaatggtatt
     1621 gagattagtc aaataaataa gatattgagc ctgggtatgc tcggaaaaaa gaagaataga
     1681 aaactagttc caactagatg gagcatctct gcaacagatg acataatatc gtcgtattta
     1741 atcaaagaat tagaacataa tccttcaata gattcattta ctgttttgaa gtataaccac
     1801 ttttcaaatt attactctgt aattttactt ccaagtgaag tctggaattt tgaaatggtt
     1861 gaagcttggt acgatgatat gaataaaaaa tttgtattag aatcagattt tgaagatgca
     1921 aatggtttag atcattatcc aaagattgca ggagcttact ttgcagcaag attggcaatt
     1981 ggagaatatt tgtcaagaat gaaaaaaaat gctgctgtat tgatctttag ggagatacat
     2041 ccaaattata ttattcctct tggggtgtgg caaataagag aaggcatcag ggaagttcta
     2101 cgaagcagat cggctgaaat ctttgatgat tttcaatctg cgttaatgta ctcatgtaaa
     2161 gatttcaaag tttctatttc agattggata aataaaagta aactttacaa aaattacgga
     2221 caacagctca gaatatctca gttttttaaa taattatagc aaacatttaa aattctaatt
     2281 aaactaaaaa ctcaaatatc attatttttg tttctgttac tttatggata ttaaaaataa
     2341 ctatcagcaa cttttaacct tagactattc ctccctttat attttctttc ttctataatc
     2401 ttgttgtttc tatactatat ctctttatca taaagaataa gttttgtgaa atattctttc
     2461 ttttggtcac ttagaactga gaaattgaaa tcggtatctg gacagaatat ttgaactctc
     2521 tcatttctat tctccttagt ttcaaatcta tttttttgct cttttttatc cctttgagaa
     2581 taataattgt tataattgta aaaaaaggat atacaatatt ctaacatgct actaaccatc
     2641 tctttagaat ctccatccaa atagacaatt ctataattgt cttgtccgtt ccaaaaatct
     2701 gttatatcca tgatcacaat acctctgata ttctgatcat caaaaaaata tatttggcca
     2761 ttacttatca tcctaaataa atcgtgattt gttagtatgt accacctcta tgcgttaacg
     2821 tatctcctat attttgatcc tgttaaataa ttgtatattc tttcctgatc tttaatctct
     2881 gctcttttta ttatatgaca atactcatgt atattcttga cacctttgat gcttgcatat
     2941 atccatctag aaactggatt gaaatccaat ttttttatta gctttctcga ttcaatgtta
     3001 tctatagata ctatcaacga ggctagagtt gttcctttat cttttccata tgtaagaata
     3061 tttttaatta aactagatgc aatgcctttt tctcgatatt caggatgaac ccgtattccc
     3121 tcaacccaaa tcatattttt atgacataat tttccgtgta tcattgcaac aattttctta
     3181 gcagacgatg tcgcatccat tgtttctgct accaataaca aactatcttt ttcattaatc
     3241 cagcaatccc agacttcttg gatataatca ccccattcaa aagtattctt acaaaaatca
     3301 aatatttggt ccttgtctga atcaattgca ggcctataaa tcaaatttat atatatttac
     3361 aaatattgtc tgaattatat ttaatattgt cttagaaata tactaattac atttgcaata
     3421 ttggatgcta ttatattttt gcatttttag attggtactg ccaacatctc tacaaaagga
     3481 atctaaacct ataaaatata tggattaaca atataaatcc caggaatatt tgaatatata
     3541 atttaccata atgaacacta ttgaacgaaa ttttaaagaa aatctgaatc atctgtacga
     3601 aaagaataaa cttacttctg aacaattaga acattttctt aaacgtggta ttcaggtcat
     3661 tgacactcag aaggatttaa aattaaaatt cttgtcttcc atcttaccaa atattgttat
     3721 aggggcatct aaacagtaca tatctggact aaaaatccca tatcaggcaa ctagctttct
     3781 tgctgcggaa tt
//
LOCUS       DATIAS010000634         4478 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1070230, whole genome shotgun sequence.
ACCESSION   DATIAS010000634 DATIAS010000000
VERSION     DATIAS010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4478
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070230"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VLA74_12875"
     CDS             complement(<1..370)
                     /locus_tag="VLA74_12875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HSF51647.1"
                     /translation="MMSIDKDNSSSSDINFTSSHLKITLDKSTFQIKRAQSLQNIEKF
                     WTEQAKNLIWNRQWDKTLEWNPPFAKWFVGGLINASINCLDKHINSEIKNKAAIIWEG
                     ENGENITLTYYQLYQKVNQFS"
     gene            complement(1144..3345)
                     /locus_tag="VLA74_12880"
     CDS             complement(1144..3345)
                     /locus_tag="VLA74_12880"
                     /inference="COORDINATES: protein motif:HMM:NF013275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSF51648.1"
                     /translation="MISLYFFLCVIFTITVGNLVIIFAEPDSKIILSNWVLIINSLVV
                     AGLASYAFLKNRENIDENKENILLTIGLVFWFIANIIWAYYEVVLDIVSPVPSLADLF
                     LLSAYVFLIYRLMIIRKKLSHIINKKIMYLMIALSGLFLAYILNLTLDMALTSNFRGT
                     MLFIVTLSYPTLNSILTVLAITILLGIKNEKQHRHLVPWVCELVGFLAIVVGDSWFAI
                     IVLTTFVEQLWISTLLLSAHYLLIAGGLIWYLRYFIKWKSKDLAFKIVAGIKKRRLSN
                     KIIFTSITIIALVLFSSVYLGTGFGGDGKNSLLIKKNHITEKSLLASTDVADGLQNSH
                     KEFVVGAIIPFTGSYSSIGKPVKVALEKAEYDVNKYFEKMNSSSRFNLIMANSKTNPN
                     DSLAAIKELHSLGAKIIVGPATSTAVSAVKDYADQNDIILISYSSTSLLSIKDDNLLR
                     LIPDDINQGKVIAERMIDDGIKVVVPMWRGDIYGNELYKATKYHFEKLGGKMEEGINY
                     KPNTGKFATSLHRINFIMWNEDLERLNNIVYEAIKKYGNESVGVFIISYDEITPILIQ
                     SPMYHSLGTVRWYGSDSIAQNHHITKNIDSALFAIKTNFSNTLFSIDTKSPKIHELIE
                     ILEKELHDGESITYPAIAYDSFWISSLSLDTNSTNSSYLVDHKNSNKKSFKDIVFETA
                     ESFDDGISGKIQLNDAGDRIGENYDFWSVSKNTEKSHYVWKIENVPIVSSH"
     gene            3876..>4478
                     /locus_tag="VLA74_12885"
     CDS             3876..>4478
                     /locus_tag="VLA74_12885"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF51649.1"
                     /translation="MSQSAKEWSNAQNALAYLNVSDNLPHRSEGEAVLIEHIPKDTNR
                     ILDLGTGDGRLIRLIKKNRPDIEAVALDVSPTMLKAARDHFANDSKVKVIEHDLSLPL
                     PDLDYFDAIISSFAIHHLKHERKKSLYEEIYDILTPTGVFCNLEHVASPSLELHINFL
                     NAIGYTPKKEDRANKLLPMETQLGWLREIGFVDVDCYWKWL"
BASE COUNT         1590 a          674 c          632 g         1582 t
ORIGIN      
        1 ttgaaaattg attaactttt tgatagagtt gataatatgt tagagttata ttttctccat
       61 tttctccttc ccatattatg gcagccttat ttttgatttc agaattaata tgtttgtcta
      121 agcaatttat tgatgcattt attaatccac caacaaacca tttggcaaat ggaggattcc
      181 attccaaagt cttatcccac tgtctattcc atattaaatt ttttgcttgt tctgtccaaa
      241 atttttcgat attttgcaac gattgtgctc ttttaatttg aaaagtactt ttatctaatg
      301 taattttcaa atgtgaactt gtaaaattta tgtcagatga tgatgaattg tctttatcaa
      361 tcgacatcat atacaatgac agttcttatt aattaaatat tattgtaata tgcataacta
      421 tatgttaatg ttgtttaact aaaatattta tatattttaa aaagggggct ctgacttgaa
      481 aatctttatt gggtgctaat cccttttgta ttcaggctag gttcaaattt aacatactcc
      541 gtatgagagt gaggctctga ctgaaccaat atctgagcgg ctataatact gcctcataaa
      601 taagaaggtg aatagatgtt tgccgcctgt aagccgaaat aaaaaataaa ataaaaaaag
      661 aatgaaaaaa aataaaaatt gagggaaagt aacatatcta gcatatgcta tttgagataa
      721 tttttaatat tatgaattat aatagaatat tacgcttgac aggaacataa ggatgacttg
      781 atacagataa agattttcat agatgttaac ttaagaataa ggtaaaatag gtttgttcta
      841 cactttttta tattatgttc tatgctcaat tttagaagaa tttttcaatt aatttcataa
      901 attttcccta acttaacaga gccaaaaaag aattctaaaa aattgtaagt tattatctat
      961 ttttagaata gagatgttct tatgcaattt taaattatac tatgctcatc cgcattgtta
     1021 gttgaaagca atagagtttc attaaacaaa tctagagaaa tcgtatttgg ttaaagatta
     1081 tttttacaaa atatcagata aaaacggaaa tacaacaagt tgatataagc aatatacata
     1141 tatctaatga cttgacacta ttggaacatt ttctattttc catacataat gacttttttc
     1201 agtattttta gaaacactcc agaaatcata attttcacca atacgatctc ctgcatcatt
     1261 aagttgtatt tttcctgaaa taccatcatc aaaagattct gctgtttcga aaacaatatc
     1321 cttaaatgat tttttattac tatttttatg gtcaacaaga tagctactgt tagtactatt
     1381 tgtatccaaa cttaaagaag aaatccaaaa agaatcataa gctattgcag gatatgttat
     1441 agattctcca tcatgcaatt ccttttctaa tatttcaatt aattcatgaa ttttgggaga
     1501 ttttgtatct atagagaata aagtatttga aaaattggtt ttaattgcaa atagtgcaga
     1561 atctatattc tttgtaatat gatgattctg agctatacta tcacttccat accaccttac
     1621 ggtgccaaga gaatgataca taggagattg aattaagata ggtgttattt cgtcataaga
     1681 tattataaaa actcctacag attcattgcc atattttttt attgcctcat agacaatatt
     1741 gtttaatctt tctagatctt cattccacat gatgaaattt attctatgta agcttgtagc
     1801 aaatttacct gtattcggtt tatagtttat cccttcttcc attttgccac ctagtttttc
     1861 aaaatgatat ttggtagctt tgtaaagttc atttccgtag atatcacctc tccacattgg
     1921 tacaactact tttattccat catcaatcat tcgctcagca ataaccttgc cttgattgat
     1981 atcatctggt atcaatctaa gtaaattgtc gtcttttata gaaagtaatg aagtactcga
     2041 ataactaata agtataatgt cgttctgatc tgcataatct tttactgctg aaaccgcagt
     2101 actggttgca ggaccaacaa tgatttttgc tccaagagag tgtagttctt ttatcgcagc
     2161 gagtgaatca ttaggatttg ttttagaatt tgccataatt agattgaacc ttgatgaaga
     2221 attcattttt tcaaaatatt tgttcacatc atattcagct ttttccaaag ctacttttac
     2281 tggttttcca attgatgaat aggaaccagt aaacggtatg attgctccca ctacaaattc
     2341 tttatgggaa ttctgtaatc catcagcaac atcagtagaa gctaataatg atttttcagt
     2401 aatatggttt ttcttaatta acaatgaatt ttttccgtca cctccaaatc cagtgccaag
     2461 ataaacagat gaaaacaaaa caagagcaat aatagttatt gaagtaaaaa taattttatt
     2521 agaaagtctc ctctttttta ttccagcaac aattttaaag gcaaggtctt ttgatttcca
     2581 tttaataaaa tatcgtaaat accatataag accaccagca attagtaaat aatgggcaga
     2641 gagcaacaaa gtagaaatcc aaagttgttc tacgaatgtt gttagaacta ttatcgcaaa
     2701 ccaactatct cctactacaa ttgccaagaa acctaccaac tcacataccc aagggactag
     2761 atgacgatgt tgtttctcat ttttaatacc aagaagaatt gttatggcaa gaacagtcaa
     2821 tattgaattt aaagtgggat aagaaagagt gactataaaa agcatcgtac ctctaaagtt
     2881 ggatgttaga gccatatcca acgttaaatt caagatatag gctaagaata atccagataa
     2941 tgctatcatc aaatacataa tttttttatt aataatgtga ctgagttttt ttcttattat
     3001 catcaatctg taaattaaaa agacatatgc agacaacaag aaaagatctg caagagatgg
     3061 tacaggagat acaatatcaa gcactacttc ataatatgcc catatgatat ttgcaataaa
     3121 ccaaaaaaca agtcctattg ttaaaaggat attttcttta ttctcatcaa tattctctct
     3181 attttttaaa aaagcatatg atgctagtcc tgcaacaacc agagaattaa taataagaac
     3241 ccagttagaa agtattattt tactgtcagg ctctgcaaaa attattacta aatttcctac
     3301 agttatagta aaaatgacac atagaaaaaa atacagtgat atcattcttt cttttttact
     3361 attgaatata caatatcagc tattataaaa tcttatttta tttgaagatg taccttcaat
     3421 ctaagaagtt agttaggtat ttgctaagct caattaattc taaaaattac tgttggttaa
     3481 agatgaattt ttatttagtt ccagcacctc ataataacat aaataaaatg tcttttaata
     3541 aatatgcata actatatcaa caaataatat ttgaaaatta aaattttcta ttactatata
     3601 taatatctta aatattatta gcaattgaac actgaaacta tgactattca actcccttag
     3661 ataatggcaa ttagcattgt tcaatgaatt ttaaatattt tataattctt agtcttttat
     3721 aacctgtgat catattatga aatctcaatc ttgtgccaaa tttttaaaaa agaaattgac
     3781 tggacatcga aatagtttta attttaccat tgacgagtct atcatataag aaaagtattt
     3841 gaattagaaa atttataatt ttatgaaatt caattatgag tcaatctgca aaggagtggt
     3901 ctaatgccca aaatgctctt gcatatctta atgtatctga taatcttccg caccgttcag
     3961 aaggtgaggc agttttaatt gaacatattc ctaaagatac gaacagaata ttagatttag
     4021 gtacaggaga cggaaggcta attagattaa taaagaaaaa tagaccagat atagaagcag
     4081 tagccttaga tgtatctcca actatgctta aagctgcacg agatcacttt gctaatgatt
     4141 caaaggttaa ggttatagaa catgatctta gtttaccact gccagatcta gattattttg
     4201 atgctatcat atctagtttt gctatccatc acttaaaaca tgaacgtaaa aagtcacttt
     4261 atgaagaaat ttatgatata cttactccga ctggagtctt ctgtaacctt gaacatgtgg
     4321 catcaccatc acttgaactt catattaatt ttcttaatgc cataggttat acacctaaga
     4381 aagaggatcg agctaataag ttgctaccta tggagacaca gctaggctgg cttagagaaa
     4441 taggatttgt agatgtagat tgttattgga aatggctt
//
LOCUS       DATIAS010000635         3574 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1342140, whole genome shotgun sequence.
ACCESSION   DATIAS010000635 DATIAS010000000
VERSION     DATIAS010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3574
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342140"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VLA74_12890"
     CDS             <1..269
                     /locus_tag="VLA74_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HSF51650.1"
                     /translation="QDKISKDILMLAYVNRIALENTVKTGKAWFWSTSHNKLWMKGEE
                     SGNIQPVHEILVDCDSDALIYIVNSEKPACHTGHNSCFHNILKK"
     gene            448..1671
                     /gene="thrC"
                     /locus_tag="VLA74_12895"
     CDS             448..1671
                     /gene="thrC"
                     /locus_tag="VLA74_12895"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSF51651.1"
                     /translation="MGIIQSLKCRECGKEYEPSFRYVCEECFGPLDVKYIYPDSIKRE
                     TFQSRTEKTYWRYFELLPIKNKNNIVSINSGFTPLQKANNLGKDLKLTTLYVKNDSVN
                     PTFSFKDRPAGVAVSRAKETNLKAVGCASTGNLASATAAHAAVANMPCYIFAPSDLEY
                     AKIAQALAYGGKFVAVDGTYDDANRVASVIGDSKGIGIVNINMRPYYVEGSKTLAYEV
                     AEQLNWKVPDYLIIPVGSGAMLNAICKGFEELNEIGLIEDVSNLKIIAAQPHGCSPVV
                     DAFKSNSDEIFPVEKPDTIAKSLAIGDPGDGIYVLKRLKQYHGFAESATNQEIIAGIL
                     KLSKTEGIFTEPAGGVSVAVMQKLLDEGKIDRDSNIVCYITGNGLKSIEAITEILPKP
                     SIIKPDVQIVSAMIR"
     gene            1719..3113
                     /locus_tag="VLA74_12900"
     CDS             1719..3113
                     /locus_tag="VLA74_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HSF51652.1"
                     /translation="MVKVEFIIPSVLNKGAGEKKISLEADNLQNAFNKASDLLGDDFK
                     RRVFDLNGKPRALINIYINGKNIRFNRDGMTTSLNEGDSIYILPAVAGGSNKPTIVTR
                     NELDSKDIQRYSRQIMLEEIGFIGMEKLRNSKVCVVGVGGIGNPVVTQLTAMGIGKIR
                     IVDRDVVEISNLHRQHLYTEQDIGKVKVEAAIEHLKKRNTDVEIEALPISVTPYTAEN
                     IVKGFDIVIDALDSVDARYALNDACIKHNIPLIYAGALGMLGSVCTILPNNSACLRCI
                     FPALSEDDMPTCSTEGVHPSILYLVAGLQVSEAVKILLDQKPTLVNTLLYIDLNELSF
                     ERIRMFRHDECPSCGKEKVDTIKHRETEHNLIIEELCGRDRGKRTYTVTPMEIPSDIN
                     LNKIIQNAELLGYNLKTRGTLGITVISNNTNPSQQLSVSFMTSGAATIVGAKDEKDAL
                     FIYKNFVNTTDDKA"
BASE COUNT         1306 a          503 c          637 g         1128 t
ORIGIN      
        1 ttcaagataa gatttctaaa gatatcctta tgcttgcata tgtaaataga attgcactcg
       61 aaaatacagt caaaactgga aaggcatggt tttggagtac ttctcataat aaattatgga
      121 tgaaaggtga ggaatcagga aatattcaac cagttcatga aatcttagtt gattgtgatt
      181 cagatgcgct aatctatata gtaaattcag aaaaaccagc atgtcataca ggtcacaatt
      241 cttgttttca taatattcta aaaaaataaa aatcattaaa aattatcata aaattggaaa
      301 aatttttata taatatctat aataagaagt tttacgatac tattttgttt taatattcta
      361 ttttttttat aatataaaat tatagtatta ctaaatttgt gtttagagaa ccttatctac
      421 aatggatttt tattcaaatt atcataaatg ggaataatac aatcattaaa gtgtcgagaa
      481 tgtggaaagg aatatgaacc atcatttaga tatgtatgcg aagaatgttt tggtccactc
      541 gatgttaaat atatttatcc agattcaata aaaagagaga ccttccagtc taggacagaa
      601 aagacatatt ggagatattt tgaattatta ccaattaaaa ataaaaataa tattgtaagt
      661 attaactcag gatttactcc attgcaaaaa gcaaataatc ttggtaagga tctaaaatta
      721 acaacattat atgtaaaaaa tgattctgtt aatccaacat tttcattcaa ggatagacca
      781 gctggtgtgg ctgtatcaag agcaaaagaa actaatctta aggcagtggg atgtgcctca
      841 accggtaatc tagcatctgc tactgctgca catgcagctg tagctaacat gccttgttac
      901 atatttgctc cctctgattt agaatatgca aagattgccc aagcattagc ttacggtggt
      961 aaatttgttg ctgttgatgg aacttatgat gatgctaata gagtagcttc tgtaatagga
     1021 gattcaaaag gtataggtat agtaaatatt aatatgcggc cctattatgt agagggatca
     1081 aaaacacttg cctatgaagt agccgaacaa cttaattgga aagtacctga ttacttgata
     1141 atacctgttg gaagtggtgc aatgctaaat gcaatttgta agggatttga agaattaaat
     1201 gagattggat taatcgaaga tgtttccaat ttgaagataa ttgcagcaca acctcatggt
     1261 tgttcgcctg tagttgatgc ttttaaatcc aatagtgatg aaatatttcc ggtagaaaaa
     1321 cctgatacaa tagcaaaaag tcttgctata ggcgatcctg gagatggaat atacgtttta
     1381 aagagattaa aacaatatca tggttttgct gaatcagcta caaatcaaga aattatagct
     1441 ggaatattaa aactatctaa aacagaaggc atttttacgg aacctgcagg tggtgtgtcc
     1501 gttgctgtaa tgcaaaagtt acttgatgaa ggaaagatag atcgagattc taatatagtt
     1561 tgttatatta ctggaaatgg tctcaaatct attgaggcaa ttacagagat attacctaaa
     1621 ccttcaatca ttaaaccaga tgttcaaata gtctcagcaa tgataagata ataaaatgaa
     1681 taaataatat atgtgaaagg taagtgagat agatataaat ggttaaagtc gagtttataa
     1741 ttccatctgt tttaaacaag ggagctggag aaaaaaaaat atcattagaa gctgacaatc
     1801 tacaaaatgc tttcaataag gcttcagatc tcttgggtga tgatttcaaa cgtagggtat
     1861 ttgatcttaa tggcaaacct cgtgctctaa ttaacatata tattaatgga aaaaatatac
     1921 gttttaacag ggatggaatg accacatctc ttaatgaagg tgattctatc tatatccttc
     1981 ctgcagtagc cggaggttca aacaaaccca ccatagtaac tcgtaatgaa ctagatagta
     2041 aagatattca gcgttattct agacaaataa tgttagaaga aataggattt attggaatgg
     2101 agaaattaag aaattccaaa gtttgtgtgg tcggtgttgg tggcattgga aatcccgttg
     2161 taactcaatt aacagctatg ggtataggaa agatccgtat tgttgataga gatgtagttg
     2221 aaatatctaa tttacataga cagcatttgt atactgaaca agatattgga aaagttaaag
     2281 ttgaagcagc tatagagcat ctgaaaaaaa ggaatacaga cgtagaaatt gaagcgcttc
     2341 caatttcagt gactccctat acagcagaaa atattgttaa aggctttgat atcgttattg
     2401 atgctttaga tagtgttgat gctagatatg cattaaacga tgcatgcatt aagcacaaca
     2461 ttcctttgat ctatgcaggt gcattaggaa tgcttggatc agtttgtaca attcttccaa
     2521 acaattctgc ctgtctaaga tgcatctttc ctgcattgtc tgaagatgat atgccaactt
     2581 gtagtacaga aggagttcat ccatctattc tttatttagt agcaggcctt caagtctcag
     2641 aagcagtgaa aatattattg gaccagaaac caactttggt aaatacacta ttgtacatcg
     2701 atcttaacga gttatcattc gaacgtatta ggatgtttag acatgatgaa tgcccgtcat
     2761 gtggaaaaga aaaggtagat acgattaaac accgagaaac agaacataat ctcataattg
     2821 aggaattatg tggtagagat agaggaaaaa gaacctatac tgttacacca atggaaatac
     2881 cttctgatat aaatttaaat aaaataatac aaaatgcaga attgttaggt tataacttga
     2941 aaacccgtgg aactttggga ataactgtta tatctaataa cactaatcca tctcaacaat
     3001 tatctgtaag ttttatgacc agtggtgcag caactattgt cggtgcaaaa gacgaaaaag
     3061 acgcactatt tatctacaaa aactttgtta atacaaccga tgataaggcc tgatcaaata
     3121 tcatgattgt gttagtttaa cgatatttat tcagctataa tgcgctattt ctttctaaca
     3181 atcattgatc attacaatag aaacagaacg taggattgac gatgtattct tctttctctg
     3241 tatttattta ctttcttgtt ctctatcagt ctgaaaaaat aaagatagac attgaaaact
     3301 tctaaagatg gaaacaaaac aagttacatc tcacattgaa taaagttgga tcttttcaaa
     3361 cctaaatgac aacgttcttc ttttgtagta tataaaaaaa taatcaaata ttacttaaaa
     3421 tattatcgat agtcctgtac tatattgaac ttgaaaaatc ggtgcttgta atatatttga
     3481 gaagaaaatg tttgtagcaa agaattttag tcattctttg attgaaaaat atgaaaaaca
     3541 tactgtctac gctgatgatg ttactagata tccg
//
LOCUS       DATIAS010000636         2747 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1342260, whole genome shotgun sequence.
ACCESSION   DATIAS010000636 DATIAS010000000
VERSION     DATIAS010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342260"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..664
                     /locus_tag="VLA74_12905"
     CDS             176..664
                     /locus_tag="VLA74_12905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51653.1"
                     /translation="MISKQQYEAQIRQIFKLLLEGKTQEEIARELHIGIRTVARYCFR
                     IDQRYGQIQAQKTDNTLFTEVQLFRHRMLHLYRSLEKKVEDPKTSGMEAAKCCEVAAN
                     IANNLLRLESECIKAVKQGLVSIGQGATTNKNNAPPLNNLRKDDVGDDDNNNSSTLVE
                     NI"
     gene            724..1125
                     /locus_tag="VLA74_12910"
     CDS             724..1125
                     /locus_tag="VLA74_12910"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF51654.1"
                     /translation="MKKALTLSITIIIMSVLTIGLLSNPSISSAADISLVNKVFAQES
                     EEVFIVPGAFDPNNDEGFVPPEISVSSEGNIVSWTNDDSTEHTVTADDGSFDSGPISP
                     GDTFDNTFDAPGDFGYHCSIHPFMTGVVVVE"
     gene            complement(1417..1710)
                     /locus_tag="VLA74_12915"
     CDS             complement(1417..1710)
                     /locus_tag="VLA74_12915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51655.1"
                     /translation="MTLELFVMWWCIEAQHCQGEDISNVFSTIIGTVIGFVIGGIISW
                     LIYDRQEKTVNKQEQILEKIQAFEEKHDEMLNTILMLDKKIDSLLENKNYTEK"
     gene            complement(2087..2683)
                     /locus_tag="VLA74_12920"
     CDS             complement(2087..2683)
                     /locus_tag="VLA74_12920"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSF51656.1"
                     /translation="MIHLTMILLALIIVLFLFSITVGLILDKSNVYGIEYSCNENVVV
                     CNGDLTDDEIEGTDKNDIIFGWIGNDFLRGMAGDDVILGGEGADTIIGDISNDVLNDT
                     VHGKDVSIGGPGDDILFGYNGNDDIYGGQGDDRLRDFGPSNSNEINNFFGEEGNDLLV
                     GSRSTDIFNCGEGIDVVLKFNITQGDKIESNCEISIKE"
BASE COUNT         1000 a          460 c          353 g          934 t
ORIGIN      
        1 tatgtccact atgtccagtg tgtccactat agaggacgag gtgaaaagat gatactttga
       61 ctttcaaatc atacttacta actgaaagac aaaagtgtta ttcttggaca aatattagta
      121 gaagaatgtg gcttaatgtg gcacattttc agttaagtag agaggaaaat tagatatgat
      181 tagcaaacag caatacgagg ctcaaatcag gcaaattttc aaattacttt tagaaggtaa
      241 gacacaggaa gaaattgctc gagaattaca tataggaatc aggactgtag cccgatattg
      301 ttttagaata gaccaaagat acggacaaat acaggcacaa aagacagaca atacactttt
      361 caccgaagtc caacttttca ggcatcgaat gctccatcta tatagaagcc tagaaaagaa
      421 agtagaagat cctaaaacat caggtatgga ggctgcaaaa tgttgtgaag tagccgcaaa
      481 tattgcaaat aacctacttc gtttggaaag cgaatgtatc aaggcagtaa aacaagggtt
      541 agtatcaata ggacaaggag caacaacaaa taaaaataat gcccctcctc tcaacaattt
      601 aagaaaagat gatgttggtg atgatgataa taataatagt agtacactgg tcgaaaacat
      661 ttaattaatt agactataat ttagtcatat caaattttta tatgctgtct taaattttag
      721 ttaatgaaaa aagcgttgac cttaagtata acaataataa taatgagcgt attaacaata
      781 ggtcttttat ctaatccatc catttcatca gcagcagata tctctttagt aaacaaagtt
      841 tttgctcaag aatcagaaga agtattcatt gtaccaggag catttgatcc aaataatgat
      901 gagggatttg ttccaccaga aattagcgtg tcctctgaag gaaatatagt ttcatggaca
      961 aatgatgact cgacagagca caccgtaact gctgatgatg gatcattcga ctctggacca
     1021 atatcccctg gagatacatt cgataatacc tttgacgcac ccggagactt tggttatcat
     1081 tgttcaatac atcccttcat gacaggtgta gttgtagtgg aataatcctc ctcttttttt
     1141 tatttaatac ttctttttat aataatttct tgataatgga tcttgcaaaa gatattcaaa
     1201 aatttaaatc taaattagta attataactg gagatttcta tttaatatat cctcagataa
     1261 caaaggaaga taaggataaa gattggttat atccacaaat gattaaatta ataaaaaaaa
     1321 ttacagattc tataatccta ttattttctc caataaattt accacattta ataaattata
     1381 aataatttaa taaataaaaa aattatttta acaaatttat ttttctgtat aatttttatt
     1441 ttctaataag gaatctatct tcttatctaa cattaatatg gtatttaaca tttcatcatg
     1501 cttctcttca aatgcttgga ttttttctaa aatttgttct tgtttattaa cagttttttc
     1561 ttgtctatca tatatcaacc aacttatgat cccacctatt acaaatccaa ttactgtacc
     1621 aataatcgta gagaaaacat ttgatatatc ttcaccttga caatgttgtg cttcaatgca
     1681 ccaccacatt acaaatagtt ctaaagtcat agaattacat ttctttttac tttttaatat
     1741 tttttaattt gatccaaaaa atagtttagg taagcataac ctaggtctaa taatagaatt
     1801 taaagtcatg aactaaatat ggttctaaac cagaaaaaat ttcagaaaaa tattacacaa
     1861 agttaattta actaggtaaa acaaatttac aagaaaaata tattatgaag ttaattatag
     1921 gtacatctaa tattcctacg aatgtattta ttattatttt acttataaca tttggaatac
     1981 ttttaccatt acttcctcaa tttgtataat atcaaaatta tcgatttaag gactttaaag
     2041 ttctggtttg caacagcaat aatatagaat tacgaactat ttcttttcat tctttaatcg
     2101 atatttcgca atttgattca attttatcgc cttgagttat attgaatttt aagactacat
     2161 caattccttc cccacagtta aaaatatctg tactacgact accaacaagt aaatcgtttc
     2221 cctcttcacc aaaaaaattg tttatttcat ttgaattgct aggaccgaaa tctctaagcc
     2281 tatcatcacc ttgacctcca taaatatcat catttccatt ataaccaaac aatatatcat
     2341 cacctggacc acctatcgaa acatcttttc catggactgt atcattcaat acgtcatttg
     2401 agatatcacc aataattgtg tctgctccct ctcctcctaa aataacatca tcacctgcca
     2461 ttccacgtaa aaaatcattg cctatccaac caaagattat atcattttta tcagttcctt
     2521 caatttcgtc atcagtcaga tcaccattgc atactactac attttcatta catgaatatt
     2581 ctataccata cacattgctc ttatctaaaa ttaatccaac cgtaattgaa aataaaaaaa
     2641 gaactattat taatgctaat aatatcattg ttaaatgtat catagttatt attctctctg
     2701 tatcctttaa aataaataaa tgattctaag tttttgttta ttgtatt
//
LOCUS       DATIAS010000637         5291 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_116748, whole genome shotgun sequence.
ACCESSION   DATIAS010000637 DATIAS010000000
VERSION     DATIAS010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5291
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116748"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1528)
                     /locus_tag="VLA74_12925"
     CDS             complement(<1..1528)
                     /locus_tag="VLA74_12925"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSF51657.1"
                     /translation="MIQLITTNLFIILVVFLIIVSQYTFELSEQQQQEKEQKELTNQN
                     SPNIENIRFIHYLDENVALEEIKSGNLDTYFFRIPLDLVSDIKNDVNINLFDKIGGSF
                     GILLNPAPSSDNDTINPFEFRDVRFAINYLINRNFISNEILHGYGIPMSDPFGLFSPD
                     YPVVMNTVESFGFHYDPDYALQQIKKTLLEHGATLKDDKWFFKDKPIKLKVLIRSDDL
                     QRKVLGELVSSALARVGFTIIKDYSDLNKAVTFTQGSDPQDFLWHVYTEGFTGGTSFT
                     KYNDAVVAQMYAPWYANMPGNQNPGFWQYQNSTLDFLTQKLVFSNFTSESERNTLLEA
                     ATKMGLEESVRIFLVKNIDPFAASSSVSGLVNDFGGGIANKYSLFNAKSNKTNSLDIG
                     VKQIYQGAWNTIGGFSDAYSSNIYSNIADSSILRHPFTGDVISMRNEVINVTTNGPYN
                     KLKVHPEAIIWNSSHGWIHADHNSTSLSKVINKILYSNWHHGIPMDKSDLLYSLYFMF
                     E"
     gene            complement(1598..2512)
                     /locus_tag="VLA74_12930"
     CDS             complement(1598..2512)
                     /locus_tag="VLA74_12930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription initiation factor IIB"
                     /protein_id="HSF51658.1"
                     /translation="MVKDISLFGDRCPRCGKGPMVTDNSTGEMFCGNCGFVINERIEE
                     TGPEWRAFSKEEHEDRSRAGIPTSLAMHDMGLATIIGPIDKDASGKPLSSSMKSTIER
                     LRTWDSRSQVHEPVDRNFRQAFSELDRLKDKLAVGDAVIEKAAYVYRKALEKGLVRGR
                     SISALVAAALYAACRDTETPRTLKDIANASNIKKKDVARCYRLLIRELDLRMPVVDPV
                     KCVARIASKAGLSEKTKRKALEILKKAEEGKISAGKDPMGLAAAALYVACVMNGENKT
                     QKDVAEAAGVTEVTIRNRYKGLKTHLKL"
     gene            complement(2662..2970)
                     /gene="yciH"
                     /locus_tag="VLA74_12935"
     CDS             complement(2662..2970)
                     /gene="yciH"
                     /locus_tag="VLA74_12935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HSF51659.1"
                     /translation="MAVICKKCGLPDDLCPCGELEKEETRIIIRLETRRFSKTTTMIE
                     GIDPKVTNMQNIVKELKSQFACGGTAKDGFIMLQGDHRDDVKGYLVRKGFNQEAIEVQ
                     "
     gene            3108..3284
                     /locus_tag="VLA74_12940"
     CDS             3108..3284
                     /locus_tag="VLA74_12940"
                     /inference="COORDINATES: protein motif:HMM:NF002318.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit Sec61beta"
                     /protein_id="HSF51660.1"
                     /translation="MSSKKKNAPLPASSAGLLRFFEDETKGIKIKPEIVLGVTGALIA
                     ISILIRVIFPVAGA"
     gene            3308..5113
                     /locus_tag="VLA74_12945"
     CDS             3308..5113
                     /locus_tag="VLA74_12945"
                     /inference="COORDINATES: protein motif:HMM:NF021370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2070 family protein"
                     /protein_id="HSF51661.1"
                     /translation="MKNGRSDNVSNIHKRWSLTRINFSSYKISLLISIISSSITIIFS
                     DYYYLKLNLIQLTIFIITGISFLIASYFLDLFLLRKTPVNKISKILHVSAFSNLLWMA
                     ILIFGYLSFIIFQKESPPKENLLEGMMLAIGLRIGIFTSVFGANLIKAIRTAIIQPTI
                     FLLLTIPSFLLIEIFSNAIAIFFGLIIIGLGIGWSILADRAGRPNLQSTFAVLQAFLS
                     AWTENKIENIEKIFLSKSKDELVNTDIVKFYSKHQSLYWVLPNIHPGPFKEIGGSNLP
                     YQIYNYFAQNAIVFHSASDHSLNIPSKEEVQKYLKSLSDTNNITDSGTTCSIPIQIKI
                     KNANATGIIFGNTAILILSYAPHGMEDIPEKIGMELKTYSKNKGYRKIFIIDSHNAMG
                     NRIDESKNQDLLAAGKECLKILKESPQYHFKIALSNTNELKKKINFGEDIGKSGLSVI
                     LIEINNNNNNKNNNKNNNSQQYAIGWADSNNMENGLREYVISKLEQNGIKVLELCSSD
                     THENSGFRTSEGYYPFGQITKFEIIADYYCKLTELANKKLEVSKYEILTIESIVKVMG
                     KNQFEDYSNALDKAMNLTKLFLIITFGVILVMLIK"
BASE COUNT         1843 a          845 c          728 g         1875 t
ORIGIN      
        1 attcaaacat aaaatacaaa gaataaagga gatcggattt gtccattgga atcccatgat
       61 gccaatttga ataaagtatc ttattaatta ccttacttag agaagtagaa ttatgatctg
      121 catgtatcca tccgtgggaa ctattccaaa ttattgcttc aggatggact ttaagtttat
      181 tatatggtcc attagtggtt acatttatga cctcatttct catagatata acgtcgcctg
      241 taaaaggatg tcggaggatt gaactatcgg ctatatttga atagatgttg ctactataag
      301 catcgctgaa ccccccaata gtattccaag ctccttgata gatttgctta acacctatat
      361 ccagagaatt cgttttgttg gatttagcgt taaataagga atatttgtta gctattcctc
      421 ctccaaaatc atttactaat ccagatacag aggatgaagc agcaaaagga tctatattct
      481 ttactaaaaa tattcgtaca gattcctcga gtcccatctt tgttgctgct tctaataacg
      541 tatttctttc actttctgag gtaaagtttg aaaaaaccaa tttttgagtc aaaaaatcta
      601 atgttgaatt ttgatattgc caaaatcctg gattttgatt tcctggcata ttagcatacc
      661 atggtgcata catttgagca acaactgcat cattatattt tgtaaaagat gtacctccag
      721 taaatccttc agtatataca tgccataaaa aatcctgtgg atcagatcct tgagtaaaag
      781 taacagcttt attaaggtca ctataatcct taataatggt aaaacctact cgtgctaatg
      841 cgctagacac taattctcct aaaacttttc tttgaagatc gtcacttctt attaaaactt
      901 ttaatttaat aggtttatct ttaaaaaacc atttatcatc ttttagtgta gctccatgct
      961 caagcaaagt ttttttaatt tgttgtaatg cataatcggg atcataatgg aatccaaagg
     1021 attcaactgt attcatcacc actggatagt caggggaaaa aaggccaaaa ggatccgaca
     1081 ttggaattcc ataaccatgt aatatctcat tggaaataaa gtttcgattt attaaataat
     1141 ttatagcaaa tctaacatca cgaaattcaa atggatttat agtatcatta tctgacgatg
     1201 gagcaggatt taataaaatt ccaaatgagc ctccaatttt atcaaataaa ttgatattta
     1261 catcattttt tatatctgaa actaagtcaa gtggtatacg aaaaaagtaa gtgtccaaat
     1321 tcccggattt tatttcctca agagctacat tttcatctaa ataatggata aatcttatat
     1381 tttcaatatt aggagaattt tgattagtta attctttctg ttctttttcc tgttgttgct
     1441 gttctgacaa ttcaaaagta tattgggaaa ctataatgag aaaaacaact aagatgataa
     1501 ataaattagt agtaattaat tgtatcataa ttgatattat gagaagagac tgattttaga
     1561 gtaaataaga tcattattac atatacaaaa aaaatattta aagcttaagg tgagttttca
     1621 atcctttata acgattccta atggttactt ctgtaacacc tgctgcctct gctacatcct
     1681 tttgtgtctt attttcccca ttcataacac atgcaacata taatgcagct gctgcaagac
     1741 ccattgggtc cttgcctgct gaaattttac cttcctctgc ctttttaaga atttcaagag
     1801 ctttacgttt tgttttttca gataatcctg ctttactagc aattctagca acacacttca
     1861 ctggatcaac aactggcatt cttaaatcaa gttctctaat caaaagccta taacagcgtg
     1921 cgacatcctt tttcttgata ttgcttgcat ttgctatatc ttttaaagtt ctaggagttt
     1981 ctgtatcacg acaggcagca tataatgcag ctgcaactag agcagaaatt gaccttcctc
     2041 taactagtcc tttttctaaa gcttttctat aaacatatgc tgccttttct attacagcat
     2101 ctcctactgc caatttatct tttagcctat ctaattcact aaaagcttgt ctaaagttac
     2161 ggtcaactgg ttcatggacc tgacttctac tatcccatgt tctaagcctt tcaatagtac
     2221 tcttcattga ggaggaaaga ggtttacctg aagcatcttt gtcgataggt cctataatag
     2281 tagctagtcc catatcatgc atagctaaag aagtaggaat tccagcacgg cttctgtctt
     2341 catgttcctc tttggaaaat gctctccatt ctggacctgt ttcttcaatt ctttcgttga
     2401 ttacaaaacc acaatttcca caaaacattt cacctgtgga attatcagtc accattggac
     2461 ctttgccaca tcttggacaa cgatccccaa ataatgatat atctttaacc attcatttca
     2521 ccataaaact ttttaataac taaattcgta ttatttatat tttttctatt atataaatat
     2581 tatcatatta aaaaattata aatccaatta ttattatact atgaataatg ttttagaagt
     2641 ttatttttta atataaaaag cctattgtac ttcaattgct tcctgattaa atccttttct
     2701 tactaaatag cctttaacat catctctatg atcaccttgt aacatgataa aaccatcttt
     2761 agcggttccg ccacaggcaa actgactttt tagctcttta actatatttt gcatattggt
     2821 tactttagga tctattcctt caatcattgt tgtagtcttt gaaaatctcc gtgtttcaag
     2881 gcggattatt attcttgtct cttccttttc tagttcacca caaggacata aatcatcagg
     2941 taatccacat tttttacata taaccgccat cttatattta tctataattt tcctatctta
     3001 ttattaagcc ttacctagta attataacta agaaaatata ttttaaatat cagagaattc
     3061 tctacaaccg atatctattt atttaataat gttttatttt ttacaacttg agtagtaaaa
     3121 agaagaatgc accattacca gcatctagtg cggggctatt aagatttttt gaagatgaga
     3181 caaaaggaat aaaaataaaa ccagagattg ttcttggagt tacaggagct ttaatagcaa
     3241 tttccatatt aattcgagtt atattcccag ttgcaggggc ttagtatggc ttttctatta
     3301 ataggaaatg aaaaatggtc gctctgacaa tgtctccaat attcataaaa gatggtctct
     3361 aactagaatt aatttttctt cttataaaat ttctttacta atatcaataa ttagttcttc
     3421 aattacaata atattttcag attattatta tttaaaactg aatttaatac aattaactat
     3481 ttttataata acaggtatat ctttcctaat agctagttat tttttagatc tttttttatt
     3541 aagaaaaaca ccagttaaca aaatatccaa aattcttcat gtttcagctt tttcaaatct
     3601 actttggatg gctatactga tttttggata tctatctttt attatttttc agaaagaaag
     3661 cccacccaag gaaaatttgc ttgaaggaat gatgttagca atcggattaa gaataggaat
     3721 atttacttca gtgtttggtg ctaatttaat taaagcaata agaactgcga taattcaacc
     3781 aacaattttt cttcttttaa ctattccttc ttttttactt attgaaattt tttctaatgc
     3841 tatagcaatt ttttttggct taattataat aggactaggt ataggatggt ccatacttgc
     3901 agatagagca ggaagaccta acttacaaag tacttttgca gttctacagg cttttctttc
     3961 cgcatggaca gaaaataaaa tagaaaatat agagaaaata tttttatcca aatctaaaga
     4021 tgaattagtt aataccgata ttgtaaaatt ttatagtaaa caccaaagtc tttactgggt
     4081 tttacctaat attcatccag gaccttttaa agaaattggt ggaagcaatc tcccttatca
     4141 aatctataat tattttgctc aaaatgcaat agtgtttcat agtgcatctg atcattcact
     4201 aaacattcct tcaaaagaag aagtccaaaa atatctaaaa tcattatccg atacaaataa
     4261 cataacagat tctggaacta catgttcaat acctattcaa ataaaaatta aaaatgcaaa
     4321 tgctacagga ataatctttg ggaatactgc tattttaata ctctcttatg cgcctcatgg
     4381 tatggaagat attccagaaa aaattggaat ggaactaaaa acatattcaa aaaataaagg
     4441 atataggaaa atttttataa tagacagcca taatgccatg ggaaacagaa ttgatgaaag
     4501 taaaaatcaa gatctattag cagctggaaa ggaatgtcta aagatcttaa aagaatcacc
     4561 acaatatcat tttaaaattg ccttatcaaa taccaatgag ctcaaaaaaa agataaattt
     4621 tggagaagat ataggaaaaa gtgggctttc tgttattctt attgagataa ataataacaa
     4681 taataataaa aataataaca aaaacaataa tagtcaacaa tatgcaatag gatgggcaga
     4741 ttctaataat atggaaaatg gactaagaga atacgttatt agtaaattag aacaaaatgg
     4801 aataaaagtg ttagaattat gttcatctga tactcatgaa aattcaggat ttagaacatc
     4861 agaaggttat tatccttttg gtcaaataac taaatttgaa ataatagcag attattattg
     4921 caaactaaca gaattagcaa ataaaaaatt agaagtttct aaatatgaaa tattaactat
     4981 tgaatcaata gtaaaggtca tgggaaagaa ccagtttgaa gattattcga atgctttaga
     5041 taaagcaatg aatttgacga aactattttt aatcattact tttggtgtaa ttctagttat
     5101 gttgataaaa taatttgatc tataatttac ttaatactaa ctaactatta aaattacttt
     5161 ttttgtattt ttactttgtt atattttttg gtgattgata caatttttac aaacttcaaa
     5221 tgatataagg tttgtataag aagtaataaa agaaagtttt ataataataa taagattttc
     5281 cattctaaaa t
//
LOCUS       DATIAS010000638         2805 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1071023, whole genome shotgun sequence.
ACCESSION   DATIAS010000638 DATIAS010000000
VERSION     DATIAS010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071023"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VLA74_12950"
     CDS             complement(<1..182)
                     /locus_tag="VLA74_12950"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0034023 - 5-(carboxyamino)imidazole
                     ribonucleotide mutase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AIR carboxylase family protein"
                     /protein_id="HSF51662.1"
                     /translation="MTKSQVAIIMGSDSDLKVMKEAAEILEYFDIPYELTIVSAHRTP
                     VRLMKYSLNAKKRGIKV"
     gene            complement(193..1356)
                     /gene="purK"
                     /locus_tag="VLA74_12955"
     CDS             complement(193..1356)
                     /gene="purK"
                     /locus_tag="VLA74_12955"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004675.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0034028 - 5-(carboxyamino)imidazole
                     ribonucleotide synthase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HSF51663.1"
                     /translation="MNELSVSNPPTIGIIGGGQLGKMIAQEAKRMSLKVIILDPGNNC
                     PASTICDKLIVADFKDEEKIYELANNSDLITYEIELANSSALKNLESNDYPIFPSPHT
                     LKIIHNKFRQKTFLRKNNLPTTDFYKIDSNDDLLSCLEKFGLPIMLKASEDSYDGHGN
                     LLISSANEIQNGLSYFLGKDIFSEKFVDFTNEISIIVARNKSGQTTLFPVAENIHRDN
                     ILDTTIVPARISSTSEENARKIAERVVNCLDDVGLFGIEMFVSKNNGILINEIAPRPH
                     NSGHYTVEGCSVSQFEQHIRCILNMPLTRPELLRPVVMKNILGPTGLTGNYKVTGLTK
                     LLSIPGVKIHLYGKKTTKPKRKLGHIIALANSVDEALKRANEAKNSIDIITDS"
     gene            1587..1754
                     /locus_tag="VLA74_12960"
     CDS             1587..1754
                     /locus_tag="VLA74_12960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51664.1"
                     /translation="MIKVTHQNHYVQSFRDERNNHKECSSCDGNGWIYEFYNDPVSWS
                     SCPHCSAESEK"
     gene            1843..2040
                     /locus_tag="VLA74_12965"
     CDS             1843..2040
                     /locus_tag="VLA74_12965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51665.1"
                     /translation="MLRKEEAIRKWFPIAAIVAGVSFVITFLLNLPIERVIAATALAG
                     IMVFSGFFFRSFGRDQEDYKQ"
     gene            2216..2611
                     /locus_tag="VLA74_12970"
     CDS             2216..2611
                     /locus_tag="VLA74_12970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSF51666.1"
                     /translation="MSILTLIIVQTVYSFIKNDIQMPKFVISIIMEFIFVFVIIKVYD
                     EIGCKWENIKVVPIAKKHKEEVQPTVQNNYYYSNSPKFNTTRFCPNCGTTVTKHIPQS
                     DLEKDETIPRFCRNCGSLINETKIHESNK"
BASE COUNT          988 a          427 c          436 g          954 t
ORIGIN      
        1 acttttattc cccttttctt tgcattaagt gaatatttca tcaatctaac aggtgttcta
       61 tgagcggaaa ctattgttaa ttcataagga atatcaaaat actctagaat ttctgcagcc
      121 tccttcatta ctttcaaatc agaatcacta cccataatta tggcaacttg cgatttagtc
      181 aactgtatat aattatgaat ctgtaatgat atctattgaa ttttttgctt catttgctct
      241 ttttaatgcc tcatcaacgg aattagctaa tgcaataatg tgacctagct ttctcttggg
      301 tttggtagtt tttttcccat atagatggat cttgacgcca ggaatggaaa gtagttttgt
      361 caatcctgtt actttatagt taccagttaa accagtaggt cctaaaatgt tcttcataac
      421 tacaggtcga agtaattccg gccttgttag aggcatgttc aatatgcagc ggatgtgttg
      481 ttcaaattga gatacggagc atccttcaac ggtataatga ccggaattat gaggtcttgg
      541 agcaatctca ttaatcaaaa ttccgttatt ctttgaaaca aacatttcta tcccgaacag
      601 acctacatca tctaaacagt ttacaactct ttctgcaatc tttctggcat tctcttcaga
      661 cgtagatgaa attcttgcag gaacaattgt cgtatctaaa atattatctc tgtggatatt
      721 ttctgctaca ggaaataatg tagtttgacc agatttattt ctagcgacaa ttatagagat
      781 ctcatttgta aaatcaacaa atttttctga aaatatgtct ttacctagaa agtacgacaa
      841 tccattctga atttcattag cagaagaaat taacaggttg ccatgaccat cgtaagaatc
      901 ttccgaggct tttaacatta tgggtaatcc aaatttctct aaacaggaca acaaatcatc
      961 attagaatct attttgtaaa aatctgttgt gggaagatta tttttcctta gaaaagtttt
     1021 ttgtctaaat ttattatgaa taatttttaa tgtatgcgga gatggaaata ttggataatc
     1081 gttagattca aggtttttta gtgcgcttga atttgccaat tcgatttcat atgttataag
     1141 atcagaatta ttagcaagtt catagatttt ctcttcatcc ttaaaatcag ctacaataag
     1201 tttatcgcaa atagtagagg caggacaatt attacccgga tcaagaataa taactttaag
     1261 tgacatcctt ttagcttcct gggcaatcat tttacctaat tgtccaccac ctataattcc
     1321 aatagtaggc ggattactta ctgataattc attcaaaaga ttggtcatga agatgataat
     1381 ttttgatgac aacaaaggtg ttaaaaatgt aatctgtaat tcaaggaact atttcatata
     1441 gaaatcacaa atttagaaac gtctaacaaa cgagttatat tgtattgccg gaaattttag
     1501 taattatatt ccttatgaaa tttctaatat taagtattag aataattttc ataatgttta
     1561 attagaacaa gtttctataa taatgtgtga taaaagttac ccatcagaat cattacgttc
     1621 aatcttttag agatgagaga aacaatcaca aggaatgttc gagctgcgat ggaaatggct
     1681 ggatatatga attttataat gatccagttt catggagctc atgtccgcac tgtagcgcag
     1741 aaagtgagaa ataggaattt cttaaaaaat cttatttttt ctttaaaata tgtataggga
     1801 ttctagagaa atatttaaca atcattaatt taaaacaata tcatgttaag gaaagaagaa
     1861 gctattagaa aatggtttcc gattgcagca attgttgctg gagtatcttt tgtcatcact
     1921 ttcttactta acctacctat tgaacgagta atagctgcta cagccttggc aggaattatg
     1981 gtatttagtg gatttttctt cagatcattt ggaagggatc aagaagacta caaacagtaa
     2041 tagagaacta aactagtgaa tgcagccata tgctaatttt taaaaattat gaaaaaattt
     2101 tatctattaa tttgaaaaaa ttgagtatta gactatttta atttgtataa atattctata
     2161 atatcagatg gttaaatttt caaatcaact ttattccatt ttattctttg cggcgatgag
     2221 tattttaaca ttaatcatag tacagacagt ctattccttc ataaaaaacg acatacagat
     2281 gcctaaattt gttatatcaa tcataatgga atttatcttc gtttttgtaa taataaaagt
     2341 atacgatgag ataggatgta aatgggagaa catcaaagtg gtaccaattg caaaaaaaca
     2401 caaagaagag gttcaaccta cagttcaaaa taactattat tatagtaatt cgccaaagtt
     2461 taatacaact agattttgtc ctaattgtgg taccactgtc acaaaacaca ttccccaatc
     2521 cgatctggaa aaggatgaaa ccatacctag attttgcaga aactgtggat cgctaattaa
     2581 tgaaacaaaa atccatgaaa gtaataaata aagtgaatat acaaaataga taaatcctat
     2641 aaacaatctt aaatgaacag aactagagat tgaaaataaa aaaatttaac agtagattaa
     2701 cactgacaat catagtaaca gtacttttag gttttatagc atataacgtg aatgaaacaa
     2761 tatttgttta tgttctctca gaaaccgtcg aagaaattca caatc
//
LOCUS       DATIAS010000639         2242 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_526474, whole genome shotgun sequence.
ACCESSION   DATIAS010000639 DATIAS010000000
VERSION     DATIAS010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526474"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            332..661
                     /locus_tag="VLA74_12975"
     CDS             332..661
                     /locus_tag="VLA74_12975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51667.1"
                     /translation="MILGKKTEEALQNLSRFYKVTPPAITVGTIKGKRKTVYAVYVQR
                     ESTIYCINSDVFYNPFIVLHEFYHHIRTRSGIHRGSEKYANMYAKSFIDSYKKITNQI
                     TKQNQKY"
     gene            complement(929..1276)
                     /locus_tag="VLA74_12980"
     CDS             complement(929..1276)
                     /locus_tag="VLA74_12980"
                     /inference="COORDINATES: protein motif:HMM:NF002586.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HSF51668.1"
                     /translation="MDQVIVISSIIVPFILFIIAAIAEIGGGYLVWLWLRKKKTYLLG
                     IVGGIIMFLYGIVPTFQPAEFGRVYAAYGGIFIISSILWGMTVEKKRPDRYEIIGSFV
                     AVLGSIIIFYTPR"
     gene            complement(1261..1626)
                     /locus_tag="VLA74_12985"
     CDS             complement(1261..1626)
                     /locus_tag="VLA74_12985"
                     /inference="COORDINATES: protein motif:HMM:NF002586.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HSF51669.1"
                     /translation="MIKFNKILITLLFFFLAGLFEIGGGYLIWIWLRDDMSWILGALG
                     GFILFLYAVVPTFQPSFFHRIYAAYGGIFIVMSLLWGWLFQGIAPDMYDIIGASIALV
                     GVIIIYYAPRKGEQVWTKS"
     gene            1985..>2242
                     /locus_tag="VLA74_12990"
     CDS             1985..>2242
                     /locus_tag="VLA74_12990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51670.1"
                     /translation="MMLSSSQQERQKQQEEEIQAGLDFLLSHFSSPLFPRTISTQKTV
                     DSQIPVSSREEALSYYRKSEFKDCKINAFYYSKVEDTTIGGL"
BASE COUNT          872 a          382 c          333 g          655 t
ORIGIN      
        1 tctccctata accatctgaa taatcaaatc atccttaaat ttcaatattt tgaacagtaa
       61 agtaatgaat tattccaaca aatagaatat ttgtatatac ataaccgtaa atcctctttt
      121 taggtcaaat ttggtttaga agtagctaat acgaatacaa aaatgtctta aatccattga
      181 tcttatcata ccaatttgaa aatcaaaaat aaggataaga taaaaaatag taattatttt
      241 atatatttat ctttataaaa attacaaggc tgaatatact acgtctatta ttgttggact
      301 ggatgattta aagaaagcta gaatagtaca tatgattctt ggtaaaaaaa cagaagaagc
      361 gcttcaaaat ctgagcagat tctataaagt tacaccacct gcaataactg ttggaactat
      421 aaaagggaaa agaaagacgg tatatgcagt gtatgtgcaa agagaaagca cgatttattg
      481 tataaactca gatgtgtttt ataatccatt tatagtgtta catgagtttt atcatcatat
      541 aagaacaaga agcggtattc acagaggttc agagaagtat gccaacatgt atgcaaaaag
      601 tttcattgac tcttataaaa aaataacaaa tcaaataaca aaacaaaatc agaaatacta
      661 aaatattttc atataattgg ctttaaaatt agttatgatt tgactggcaa aattggctga
      721 cccattttga tcgagcaatt ctaatttcac tgccatgtac agcaaaaaaa ttataggaca
      781 ataaagattt ttcaaagttt caacttcaaa tattgaattt ctagatttat acaaggaata
      841 tgaaagattt ggatccacct aaaaatttat tgcatataat tcgttagtac attaaaatca
      901 tctaaattta ttaaaataag ttcctctttt atctaggagt ataaaatatt attattgatc
      961 ccaaaacagc tacaaatgaa ccaattatct cgtacctatc aggtctcttt ttttccaccg
     1021 tcatacccca taaaatagac gagatgataa aaattcctcc atatgctgca tatactctcc
     1081 caaattcagc aggttgaaat gtcggaacga tgccgtatag aaacataata atacctccaa
     1141 ctatacctag caaatatgtt ttctttttac gtaaccatag ccatactaga tatcctcctc
     1201 ctatctcagc aattgctgca ataataaaaa gtatgaaggg aactatgatg gaggaaatta
     1261 ctatgacttg gtccaaactt gctcaccttt cctaggtgca taatatatta ttattacacc
     1321 taccaatgca atagaagcac ctattatatc gtacatatct ggagctattc cttgaaagag
     1381 ccatccccaa agtaatgaca taactatgaa gattccccca tatgctgcat agattctatg
     1441 aaaaaatgat ggttgaaaag taggaacaac tgcatacaaa aaaagaataa agccgcctaa
     1501 ggctccaagt atccaactca tgtcatctct caaccaaatc caaataagat atcctcctcc
     1561 tatctcaaaa agtccagcaa gaaaaaagaa aagtaaagtt atcaaaattt tattaaattt
     1621 aatcacttaa atcgttggtt ttgcttgatt attaaaaatt tggttattga cagtgcctta
     1681 atcattataa ataaatatca tgaaactaga gataaacgga ttgtaatagt aactacgaga
     1741 aattaattaa ttaattaaaa gaagaaacca gtaaaaaagt tctaaaaata cgtttgcccc
     1801 tccatccagt gtattcacag tattcaagcc gtcacaaggt ttagacttcc tattatcgca
     1861 tttctccggt ccagaattcc caagaacaat aatgacacca atggtaaagc agaaggaagt
     1921 atattcaaag gaacaggcac tgcagtattt tacaaagagg ttaagaggag gataaaaaat
     1981 aattatgatg ttgtcgtcta gtcagcagga acggcagaaa caacaagaag aagagataca
     2041 agcagggcta gacttcctac tttcccattt ctccagtcca ctgttcccca gaacaatatc
     2101 aacacagaaa accgtggata gccagatacc agtaagcagt agggaagagg cattaagtta
     2161 ttacagaaaa tcagaattca aggattgcaa gattaacgcc ttttactatt ccaaggtgga
     2221 agatacaaca atagggggtt ta
//
LOCUS       DATIAS010000640         3398 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1614277, whole genome shotgun sequence.
ACCESSION   DATIAS010000640 DATIAS010000000
VERSION     DATIAS010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1614277"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..196)
                     /locus_tag="VLA74_12995"
                     /pseudo
     CDS             complement(44..196)
                     /locus_tag="VLA74_12995"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
     gene            complement(291..668)
                     /locus_tag="VLA74_13000"
     CDS             complement(291..668)
                     /locus_tag="VLA74_13000"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HSF51671.1"
                     /translation="MLNYDRLSRKPLLFRSFTGLELSEFDSIYREIELKYPEEIKRLS
                     REKKRTRSIGAGRHFKLTVRDRFLMLLVYYKLYITHTLASFLSDLDQSNVHRDIRYME
                     PIVSSCIPLPQKLYNITRRLRTV"
     gene            806..1873
                     /locus_tag="VLA74_13005"
     CDS             806..1873
                     /locus_tag="VLA74_13005"
                     /inference="COORDINATES: protein motif:HMM:NF017773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51672.1"
                     /translation="MTLDNIYASPDSDVLESGQHIPVYMITTRGDLPLPEEVQGYGYN
                     DQYQFGDISQLKNECPGEIAIFVHGWLNNEEMAKERLDRVKLSLEQNNYINTSLIGFS
                     WPSDTDFTPEGWLEAKQIAKDNGPKLANFISNYINDCKEIHDKDTKVRLFSHSLGARV
                     ILSSLQNLHEDPIWNNNDYKITSVHLMGAAVDDEVSMDPIDLYNNPAYGSGQLGCFPN
                     HYYEENNIKFPYGNAIGEEVIDFYNLMNPEDNVFQFYYPCYEGADNALGINGKQMDPE
                     VVQTPNNYIDLNIRDEIKDIYDADADGQEDLGLCNAFNFCFVDIGDNHAGYMGFRNIS
                     NSNLLEYDGAINRVVDHWSTQ"
     gene            2228..3286
                     /locus_tag="VLA74_13010"
     CDS             2228..3286
                     /locus_tag="VLA74_13010"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSF51673.1"
                     /translation="MKLVIEPDLKSDDNNLVNCREELDTTATKDINEIELDVAELKIL
                     KVSKTFLNSKNKKSDKNNIDKELSFNKDYYHTDKLKIKLGEVKKGETICIIIEYSAGY
                     YNSNFSVPRSGFHFILDKQQAWTQGETIESRYWFPCIDDPQMKFPREIHVIVPKDFVV
                     VSNGEEEGKSLLVKSKNGEEKKLWIWKHNEQDPTYVTAVAIGDFIIKKGSYTSKITNR
                     FIPLIYYWPKNLQKEYDPMLTFSYTPSIMKFIEDYTQTVYPYENYKQVAVDDFDFGGM
                     ENTTCTIITKEEFHDNKSNDYISDRDLLCHELAHQWFGDLITCKSWSHTWLNEGFVSY
                     FESLYLLYKVLCCVIPSS"
BASE COUNT         1200 a          456 c          553 g         1189 t
ORIGIN      
        1 ccatggtatc caaggtcaaa atagttttta acctgtggtg gtgttattgg atgttcgtct
       61 ttttgtagac agaataatca tgctgtcttc ctttcttgtg ctgatttgat ttatgcagta
      121 tctttccttc tttattgacc atatattgtg tctttacagt atgtcttttc ttcttcttct
      181 taccagaata gtactctttc ttcctctttt cttgttttta ggtcttggaa tctcctgttc
      241 tgttgaatct ataaatgctt taaatcctgg aaagtatatc tctacttcct ctacacagtt
      301 ctcaatcttc ttgtaatatt gtataacttt tgaggtagcg gaatacagct tgatactata
      361 ggttccatat agcgtatatc tctatgtaca ttgctttgat ctagatcaga cagaaaacta
      421 gcaagtgtat gtgttatgta cagtttatag tatacaagaa gcatgagaaa tctatctctt
      481 actgtcagtt tgaaatgtct tcctgcacct attgatcttg ttctcttctt ttctctagat
      541 aaacgtttta tctcttctgg atattttaat tctatttccc tgtaaatgga atcaaattca
      601 gataattcta atcctgtgaa ggatctaaac aacaacggtt ttctagataa tctatcataa
      661 tttagcaaat ctacgaaata actactaaaa aagaggaata tagctttaag ctttctaatt
      721 atgcaaaaga tgtaatgttc ttcaatcaaa atactataat attttctata gtgatagcag
      781 tattatcatt atttttagtg atctgttgac attagataac atctatgcta gtcctgattc
      841 tgatgtactt gaatcaggac aacatattcc tgtatatatg ataacgacta ggggagatct
      901 acctcttcct gaggaagtac aaggatatgg ctataatgat cagtatcaat ttggtgatat
      961 cagtcaatta aagaatgaat gtcctggaga aattgcaatt tttgttcatg gatggttgaa
     1021 taatgaagag atggctaaag agagattaga cagagttaaa ttatcattag aacaaaataa
     1081 ctacattaat acttcattga ttggtttcag ttggccttca gatacagatt ttacaccaga
     1141 gggatggtta gaagcaaaac aaatagctaa agacaatggt ccaaaacttg caaattttat
     1201 ctctaattat attaatgatt gtaaagagat ccatgacaag gatacaaaag ttaggctttt
     1261 tagtcattca ttaggtgcta gagtaatact tagcagttta cagaatttac atgaagaccc
     1321 gatttggaat aataatgatt acaaaataac atcagttcat ctaatgggag ctgctgtaga
     1381 tgatgaagta tcaatggatc ctattgatct ttataacaat cctgcatatg gatcaggtca
     1441 attaggctgt ttccctaatc attattatga agaaaacaat attaagtttc cctatggaaa
     1501 tgctatagga gaggaggtaa tcgattttta caatttaatg aatccagaag ataatgtttt
     1561 tcagttttac tatccatgtt atgaaggagc agataatgca ttgggaataa atggaaaaca
     1621 aatggatcca gaagtagtgc agacaccaaa taactatata gatttaaaca taagagatga
     1681 gataaaggat atttatgatg cagatgccga tggacaggaa gaccttggtc tatgtaatgc
     1741 gtttaatttt tgttttgtag acataggaga taaccatgca ggatatatgg gatttagaaa
     1801 tatttccaat tcaaatcttc ttgaatatga tggagctata aatagggttg tagatcattg
     1861 gtctacacaa taactttaat ttggtaataa tagaaattaa atttaaaccc ttattttaat
     1921 tataataatt gcattttata ttatataata catactcttt tctaaaaaaa ggattaattt
     1981 ggttcagatg ttgttattta ggtaacaaat tataaattaa caatttatta tattaatatt
     2041 tacattatga ttctaaaatt actattcata ctttttcggc gccgaaaaat tttttttaat
     2101 aatgtaattt caatagaaaa atcttattaa gatataacca tataattgtt caataaatga
     2161 agtcctataa atttgaatta gatgacagta aaccaaatct aagttttatc cattttcaat
     2221 agattacatg aaactagtaa tagaacctga tctaaaatct gatgataata atttagtaaa
     2281 ttgtagagaa gaactagata caacagctac aaaagatatt aatgaaattg aattagatgt
     2341 tgctgaatta aaaatattaa aagtgtcaaa gacttttttg aattctaaaa ataaaaaatc
     2401 tgataaaaat aatatagaca aagaattgtc atttaataaa gactattatc acacggataa
     2461 attaaaaatc aaattaggtg aagtaaaaaa aggagaaaca atttgtatta ttatagaata
     2521 ttcggcaggt tattataatt caaattttag tgtacctaga agtggattcc atttcatttt
     2581 agataagcaa caagcatgga cacaaggaga aacaatcgaa tcaagatatt ggtttccttg
     2641 tatcgatgat cctcagatga aatttccaag agaaattcat gttattgttc ccaaagattt
     2701 tgtggttgtt tccaatggtg aagaagaagg aaaatctctt ttagtaaaat caaaaaatgg
     2761 tgaagagaaa aaactctgga tatggaaaca caatgaacaa gatccaacct atgtaacagc
     2821 tgttgctatt ggagatttta ttataaaaaa ggggtcctat acaagtaaaa ttacgaatag
     2881 atttattcct ttaatctatt attggcctaa aaatctgcaa aaagaatatg atcctatgct
     2941 aactttttca tatacccctt ctattatgaa attcattgag gattacacac aaactgtata
     3001 tccttatgag aattataaac aagttgcagt agatgatttt gattttggag ggatggaaaa
     3061 tactacgtgt actataataa caaaagaaga gtttcatgat aacaagtcca atgattatat
     3121 tagcgatcga gatcttctat gtcatgaact ggctcatcaa tggtttggtg atttaattac
     3181 ttgcaaatca tggtcacata cttggttaaa tgaagggttt gtttcatatt ttgaatcatt
     3241 atatttattg tataaggtgc tttgttgcgt aattccctct tcctaacaca tttagctaac
     3301 ctattctagt catattatat gatgaactgg agaaattaca acgagtctct agtaaaaaga
     3361 ggtgaagtat tacttgattt tgatgttgta gataactg
//
LOCUS       DATIAS010000641         2410 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1889378, whole genome shotgun sequence.
ACCESSION   DATIAS010000641 DATIAS010000000
VERSION     DATIAS010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889378"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            269..748
                     /locus_tag="VLA74_13015"
     CDS             269..748
                     /locus_tag="VLA74_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusA-like transcription termination
                     signal-binding factor"
                     /protein_id="HSF51674.1"
                     /translation="MTEKIKLTSDELRLISLFSSITSASARDCIVDEKMDRVIFVVNK
                     GQMGLAIGKGGTTIKQLQNVVPRRIELVEYSDNVDEFLKNILNSSMINEIKINKRIDG
                     TKQAIVVVDSKKKGVVVGKEGRNAEKARLLARRYFQISNVLIVSPEQTTNDNNGVNI"
     gene            750..1187
                     /locus_tag="VLA74_13020"
     CDS             750..1187
                     /locus_tag="VLA74_13020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018039449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HSF51675.1"
                     /translation="MAKSPLGLFAGRVLNLKRKRSRWANKYYKRRVLLLDKKTNPMEG
                     APQARGIVLEKVGIESKQPNSAVRKCVRIQLIKNGKSITAFLPRDGALNFIDEHDEVI
                     VEGIGGSMGGAMGDIPGVRWQVFKVNGVSLKELVYGKKEKPRR"
     gene            1190..1798
                     /locus_tag="VLA74_13025"
     CDS             1190..1798
                     /locus_tag="VLA74_13025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HSF51676.1"
                     /translation="MSGKEITKILLFNKWETAGIEVNDPGLNRVISFNPSMVIPISFG
                     RHEHQRLKKAEVNLIERLANKLMRFGKKYAKNTGRMGGKKAKSLNVVKTAFEIINLET
                     GKNPVELLVRAIENSSPNEDTTRIVYGGVVYHVSVDVSPLRRLDLALRFIAEGVREST
                     YSNPQIIEEALAKEIILAANNDMTSHAIKKKNEQERIAMASR"
     gene            2151..>2410
                     /locus_tag="VLA74_13030"
     CDS             2151..>2410
                     /locus_tag="VLA74_13030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51677.1"
                     /translation="MSSKDDFVFSKSALMSTKAGKDILKQVLLRERGYKQYNKYKMKY
                     EMEFEDFTKRFLLSLHRRIISDTSPNSTVSQFAEEVGSQDMEL"
BASE COUNT          922 a          276 c          423 g          789 t
ORIGIN      
        1 aagatgtaaa taccttattg gagacacaat aaatttttta tttttatatt ttgtatttgt
       61 tagtcattat acttttaaaa gtcaaaatat tttaataaat aattagtttt ttggactttt
      121 agattatgta ttttgaaaac aaatttttat ttcttttatt gatatcaaaa atcttcatta
      181 aaatttaaat tatactttat tacacaggat gttaatcatt tgatgtataa tataactaaa
      241 aattggtata tagaggtatt gtggaataat gactgagaaa ataaaactaa catctgatga
      301 acttaggctt atctctttat tttcaagtat aactagtgct agtgcaagag attgtattgt
      361 agatgaaaaa atggatcgag taatttttgt tgtaaataaa ggtcaaatgg gtctggctat
      421 tggcaaagga ggcacaacta taaagcaatt acaaaatgta gtgcctcgca gaatagagtt
      481 agtagaatat tctgataatg tagatgaatt tttgaaaaat attcttaatt ctagtatgat
      541 taatgagata aagattaata aaaggataga tggtacaaaa caggcaattg ttgttgttga
      601 ttcaaaaaaa aagggtgttg tagttggaaa agaaggtaga aatgctgaaa aagcaagatt
      661 gcttgcaagg cgatattttc aaatttcaaa tgttctaata gtaagtcctg aacaaacaac
      721 taacgataat aatggtgtga atatataaaa tggctaaatc tcctttgggt ttgtttgctg
      781 gacgtgttct taatttaaaa agaaaacgtt ctagatgggc aaacaaatat tataagagac
      841 gtgtattatt gcttgataaa aaaactaatc ctatggaagg tgcgcctcag gctagaggta
      901 ttgtattgga aaaagtagga atagaatcaa aacaacctaa ttctgccgta cgtaaatgtg
      961 ttagaatcca attgataaaa aatggaaaat caataactgc atttcttcca cgagatggtg
     1021 cattaaattt cattgatgaa catgatgaag taatagtaga ggggattgga ggctcaatgg
     1081 ggggtgcaat gggtgatatt ccgggagtac gatggcaagt tttcaaagtt aatggtgtat
     1141 cattaaaaga attagtttat ggtaaaaagg aaaaaccaag gcgataaaaa tgagcgggaa
     1201 ggaaattaca aaaatattat tgtttaacaa gtgggagaca gctggtatag aagttaatga
     1261 tccaggatta aatagagtta tatctttcaa tccatcgatg gtaattccta tatcttttgg
     1321 aagacatgaa catcaaagac ttaaaaaagc tgaagtaaat cttattgaac gattagcaaa
     1381 taaattaatg cgttttggaa aaaaatatgc aaaaaatact ggacgaatgg gtggaaaaaa
     1441 agcaaaatca ctcaatgttg ttaaaacggc ttttgaaata ataaatttag aaactgggaa
     1501 aaatcctgtt gaattactag taagagctat agagaactct tctccaaacg aagatactac
     1561 aagaattgtc tatggtggtg ttgtatatca tgtttcagta gatgtttctc ctctcagacg
     1621 tcttgattta gcacttagat ttatagcaga aggagtaaga gagtcaacct attctaatcc
     1681 tcagataata gaagaagcat tagctaaaga aattattcta gcagctaaca atgatatgac
     1741 aagtcatgca ataaagaaaa agaatgaaca agaacgtatt gcaatggctt caagataaat
     1801 aactcatttt actattttgt taccatttta cttacaattg tatagattta gttgattgaa
     1861 atatttctaa ttaaaaatta attaaaaacc tttccgaaat tatccatcta taatcaatta
     1921 tattatttgc tagttgcaag accaagatag tttttacctt cttttcgcat attgtaaaca
     1981 atttcctgaa tcctgtatta tgccatgaat ttgttctctc tcaaccttat ttttaattat
     2041 aatgtaataa agatgataaa aataaggatc gatattatta tctatttttg ggataggtgt
     2101 caaatataaa agataataaa taatggcaat tacaattcaa ctaattataa atgagtagca
     2161 aagacgattt tgttttttct aaaagtgctt taatgagtac aaaggctggt aaagatatac
     2221 ttaaacaagt attattgaga gaaagaggct ataaacaata taataaatat aaaatgaaat
     2281 atgaaatgga atttgaagat tttactaaac gtttccttct atccttacat agacggataa
     2341 tttctgatac ttccccaaat tcaactgtat ctcaatttgc agaagaagtt ggttctcaag
     2401 atatggaact
//
LOCUS       DATIAS010000642         2710 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1614586, whole genome shotgun sequence.
ACCESSION   DATIAS010000642 DATIAS010000000
VERSION     DATIAS010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1614586"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(283..480)
                     /locus_tag="VLA74_13035"
     CDS             complement(283..480)
                     /locus_tag="VLA74_13035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51678.1"
                     /translation="MSKDKARSKISNLFKFKEKLYKTKDDQHIFKCKICKMEFDNKDR
                     MNIHKKIAHSGKGEKKKQSRH"
     gene            905..1063
                     /locus_tag="VLA74_13040"
     CDS             905..1063
                     /locus_tag="VLA74_13040"
                     /inference="COORDINATES: protein motif:HMM:NF014053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF51679.1"
                     /translation="MTSDLIIRPPYDAIVIGAGHNGLTCACYLARFGLEVLVIEKYDS
                     ISGMTITD"
     gene            1516..2253
                     /locus_tag="VLA74_13045"
     CDS             1516..2253
                     /locus_tag="VLA74_13045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51680.1"
                     /translation="MRPVPDSIKSDIIRKYLEGLSTLQISQSLRVSVGTVSTVTTEAA
                     KQDEYFSYMREIARKFYTENLKFPHVISAIRLYYKIKEVGLTCSFFENFLESTNLETY
                     RLEIEHDKFLTKITKILQFEKQYKINLVDIPDYIRNRKEEVKINDEISRINQSLYSRY
                     SVKEGEIQEYKREKPGLSRARDLAAISLPTHMDWLVIIDHLFKKASRRGKIKIDPNIL
                     YKKLNHIYKNPDKHIDIIKQILEFPSD"
BASE COUNT          949 a          396 c          379 g          986 t
ORIGIN      
        1 caaaaaatac ttttatttat cttacattga tcgtaaattt acactgttgt cgtaatcact
       61 ttttattatt ttatataatc ccatttatcc aaataaatag atcgtcgtac ttgacgttgt
      121 aatactccat ttcttcttca gtttgtctgt aacaagtata caattgcctt ccctatcatt
      181 tctttaacta ctacaactac tgacgatgtc tttatattta ttaaatctag aattttgttg
      241 ttattccagc cacttttttg actagaacga tatacgcaaa atttaatgtc ttgactgttt
      301 cttcttttct cctttacctg aatgtgcaat ttttttatgg atattcattc ggtctttgtt
      361 atcaaattcc atcttacata tcttacattt gaaaatgtgt tgatcatctt tggttttata
      421 caacttttct ttaaatttaa ataaatttga gattttcgat ctagctttat ctttagacat
      481 cagacaaaat gaaacaatag gctatttaat tatcagttaa ccaagttaac taatatgtaa
      541 tcaaattcaa ccatatgatt cactatatat tgggatattg tagatgatat ctatctagtt
      601 ggtgtcagat cattgttcag tgccataaaa atattagtaa aaagacaata aaggatataa
      661 tggtagtcaa gatagaaatt tgcgataatt ttgagaaaaa ttagaatata aaaataatac
      721 tagattgtta ctaaatccta tgttgagatg aaatctttct ataagaataa tgctatcaac
      781 ctttatctaa ttggaaataa acagctctaa taatcttcgg actaaaaggc tatatctttt
      841 cccttaaact tttatgtatc cttaaaatac ctaataggct ttatgaaaag atgaaaagac
      901 tgttttgacc agtgacctta taattcgccc accttatgac gccatagtta taggagcagg
      961 acataacggt ttaacttgtg cttgttattt agctagattt ggacttgaag tactggtaat
     1021 agaaaaatat gattctatca gcggtatgac aataactgat taataatatt gataagatat
     1081 ttcaattagt tttcagatcc ttttcaagtg tatttcaaaa ggctttcaaa tgattatttt
     1141 ttagctttca aatgattttc aaattccttt caaatgctgt tcaaaacacc ctatgttgtg
     1201 ctcatattgg tctatcacta tgccaatagc tgagcaaatt aatatgctaa tctactataa
     1261 tttttttaaa ttattcgaat aaattgatta acatgaacaa aatttatacc cgcgttctca
     1321 ttagaaattt gtatggatgt ataattattt ttgggttaca ttctgaaaaa atcattgata
     1381 tgtttaatcg gataatctat gtgaaaaata ttaaaattta atgcaaatca tctcgaatat
     1441 cagaatatat aacttgtaga ataaaattta ttttagatag taaatgtttt aaataaattc
     1501 ttcttcttct ttcaagtgag acctgttccc gattcaataa aatcagacat tattagaaaa
     1561 tatttagaag gactttcgac ccttcaaatc agccaatcat tgagagtgag tgtcggaact
     1621 gtatctacag ttacgactga ggcagcgaaa caagacgaat atttttcata tatgcgagag
     1681 atagcaagaa agttttacac tgagaattta aaatttcctc atgtaatttc ggcaatacga
     1741 ctttactaca agattaaaga agtgggtcta acttgctcat tttttgaaaa ttttttagaa
     1801 tctacaaact tagaaactta tagattagaa attgaacacg ataaatttct aaccaaaata
     1861 actaaaatat tacaatttga aaaacaatac aagataaatc tggtagatat acccgattat
     1921 attagaaaca gaaaggaaga ggttaagatc aatgatgaaa tttctcgcat taaccaatcc
     1981 ctttattcca gatattctgt caaggaagga gaaatacagg agtataaaag ggaaaaacca
     2041 ggtttatcaa gagcacgaga tttagctgca atatctcttc caacccatat ggattggttg
     2101 gttattattg atcacttatt taagaaagca agtagaaggg gcaaaatcaa aattgatcca
     2161 aacattttgt ataaaaaact gaaccatatc tataaaaatc ctgataaaca tatagatatt
     2221 atcaaacaga ttttggagtt tccaagtgat tagcaaagaa tatcattatg tattttttag
     2281 gtcgtattaa gttaagaaac ctgaaaacaa acacataatt ttattggttt tgtaatggtt
     2341 cttgtcttta agagattcta cgatacaata tcgaagttct cttcaccttg tatattgata
     2401 tgagtctgcc attcacatca ggattccaca attcttcgag atttattctg ttctgaatta
     2461 ttactgctga gaaatctgtt tactaaatga agactattat ctatttatca tttccagatt
     2521 ttctgctatt ataaaatatg agcatgattg ggtcattgtt gtgaatattc gtatcgcaaa
     2581 aataatgttg aatatgttac catctaacta acctttatct atctattaac atatagttag
     2641 cattccattt agaaggaata aggtgatgta atattaccac cttattttat agtgttgtct
     2701 gtatctcatg
//
LOCUS       DATIAS010000643         3102 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_117620, whole genome shotgun sequence.
ACCESSION   DATIAS010000643 DATIAS010000000
VERSION     DATIAS010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117620"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1179
                     /gene="thsB"
                     /locus_tag="VLA74_13050"
     CDS             <1..1179
                     /gene="thsB"
                     /locus_tag="VLA74_13050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HSF51681.1"
                     /translation="NTAMQTKLVSKEADELAEIVVNAVLQVADKLDSKYKVDIDDIKV
                     EKKAGGSLRNTTLIQGIVLDKEVVHGGMPKRIEKAKIALLNCALEIEKTEFDAKINIS
                     SPDQMKMFLEEENRMLKDMVDKIKKSGANVVICQKGIDDIAQHYLAKSDILTVRRVKE
                     SDMTKLARATAARIVNNIDDLSPDNLGSADLVEERKVETDKWVFVEGCKHPKSVTILV
                     RGGSQRVVDEAERSIHDSLMVTKDVLEKPFIVAGGGSPEAYVAGKLREWTNTLSGREQ
                     LAAEKFADALEVIPITLAENAGMDPIDTTTDLRAKQSKGSKWTGIDVKAAKIADMSKL
                     DIFEPLSVKEQIIKSATEVASMILRIDDVIASSKSGGAGGGMPPGGMGGMPPGGMGEM
                     "
     gene            complement(1189..1407)
                     /locus_tag="VLA74_13055"
     CDS             complement(1189..1407)
                     /locus_tag="VLA74_13055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51682.1"
                     /translation="MKCIICERARIENSEYCIYHNKAKRYLKENYKKWSEAYSTNLTW
                     DQYLDKLSKLENIGIWIKEVIDMELKKS"
     gene            1513..1854
                     /locus_tag="VLA74_13060"
     CDS             1513..1854
                     /locus_tag="VLA74_13060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51683.1"
                     /translation="MNYNKKSKLILVISVIYLIFFFALSTGLINAILEGVNVPEGLTI
                     VPSRSLQTISETIIMTLILFVGVFGSFLLYKSGHSNTPKTQYGFLAGGFFVITMSLIL
                     GLMIINIKLGL"
     gene            1989..2525
                     /locus_tag="VLA74_13065"
     CDS             1989..2525
                     /locus_tag="VLA74_13065"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide adenylyltransferase"
                     /protein_id="HSF51684.1"
                     /translation="MLIGLFIGRFQPLHLGHIEAIKFAMRQLSTLIIVVGSAQISYEL
                     RNPFTAGERIKMIRNTLIDIDEIDIRNILIIPVPDTTIHALWTHNLDLLVPPYDVIFT
                     NDPFTIALFQERQKKIIQPLLFERQKFSGTKIRENMVKKENWKNLVHFETVKVIEEIN
                     GIERLTLLWEKYKEYIND"
     gene            2576..>3102
                     /locus_tag="VLA74_13070"
     CDS             2576..>3102
                     /locus_tag="VLA74_13070"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase domain-containing protein"
                     /protein_id="HSF51685.1"
                     /translation="MSSNDDLPSILDSIKIGDIVNVVLNNNSIISGRYMPRYESSEKD
                     HIIIKLNNGYNIGIKLNRIKSINKVSSFSIVTEELPEKSLDNSITLKSQYRNDIELSK
                     MSNLPKIALISTGGTIASKIDYRTGGVTSVLSAKDLYTSIPELSLYASIDTEILFNEY
                     SENIGPTHWHLIASK"
BASE COUNT         1171 a          401 c          509 g         1021 t
ORIGIN      
        1 aatacagcaa tgcaaactaa acttgtctca aaggaagctg atgaattagc tgaaattgta
       61 gtaaatgcag ttttacaagt agcagataag cttgattcaa aatacaaagt agatattgat
      121 gatattaagg tagaaaagaa agcaggagga tcattaagaa atactacttt aattcaagga
      181 atagtactag acaaagaagt agttcatgga ggaatgccaa agagaattga aaaagctaag
      241 attgcattat taaattgtgc tttggaaatt gaaaagactg aatttgatgc aaaaataaac
      301 attagctctc cagatcagat gaaaatgttt cttgaagaag aaaatagaat gttaaaagat
      361 atggttgata aaattaaaaa aagtggcgct aatgtggtaa tttgccaaaa aggaattgat
      421 gatatagccc aacactattt agcaaaatct gatattctaa ccgttcgtag agttaaagaa
      481 agtgatatga caaaattagc aagggctact gctgctcgta ttgtaaacaa tatagatgat
      541 ctaagtcctg acaatttagg tagtgctgac ttggttgaag aacgaaaagt tgaaactgac
      601 aaatgggtgt ttgttgaagg ttgtaaacat ccaaaatccg taactatttt ggtacgagga
      661 gggtctcaaa gagtagtaga tgaagcagaa cgttctattc atgattcgct aatggtcaca
      721 aaagacgttt tggaaaagcc atttatagtt gctggaggtg gatctccaga agcttatgtc
      781 gcagggaaac ttagagaatg gacgaataca ttatcaggaa gagagcaatt ggctgctgaa
      841 aaatttgcag atgctcttga ggtaatacct atcacattag cagaaaatgc aggaatggat
      901 cctatagaca caacaactga tcttagagca aaacagagta aaggttccaa atggactggc
      961 attgatgtta aagctgcaaa gatcgctgat atgtcaaagc tagatatatt tgaaccatta
     1021 agtgtaaaag aacagataat taaatctgca actgaggtag catcaatgat attaagaatt
     1081 gatgatgtaa ttgcatcgag taaatctgga ggtgcaggag gaggaatgcc accaggtgga
     1141 atgggaggaa tgccaccagg tggaatggga gaaatgtaaa tatcttattt aacttttttt
     1201 taattccata tcaattactt ccttaatcca aataccaata ttttctaatt ttgataattt
     1261 atcaagatat tgatcccatg ttaaatttgt agaataagct tcactccatt tcttataatt
     1321 ttctttaaga tatcttttgg ctttattatg ataaatacaa tattcagaat tttctattct
     1381 tgccctttca catataatgc atttcattag atttggttat gttgttatat tgtatattaa
     1441 aaggatccaa catattaatc tcaacaataa tttaaaaaag gtatttatat ttattttaaa
     1501 tgttatcttt tattgaatta taataagaaa tcgaaactca ttcttgtaat atcagtaatt
     1561 tatctaattt tcttttttgc attatcaaca ggattaataa atgccattct tgaaggtgta
     1621 aatgtacctg aaggacttac cattgtacca tcaagatcac tacaaacaat aagcgaaaca
     1681 ataattatga cactaatact ttttgtaggt gtatttggat cttttctatt atataagtca
     1741 ggacactcaa ataccccaaa aacacaatat ggatttttag ctggaggatt ttttgttatc
     1801 acaatgtcgt taatattagg attaatgata ataaatataa aacttggtct ataaagaata
     1861 atttagaaat tcttattatt attaataata ttttaattaa agccaatata ttattttact
     1921 aatagtttta attctaataa ttataattac ttagatcctt taaattaatg tttattcttt
     1981 ttcctaatat gctcataggt ttatttatag gtcgttttca accgttacat ctaggacaca
     2041 ttgaagccat caaatttgca atgcgacaac tttcaacatt gattatcgtt gttggaagtg
     2101 cacaaataag ttatgaacta agaaaccctt ttaccgcagg tgaaaggata aaaatgatta
     2161 gaaatacctt aattgatatt gatgaaattg atattcgtaa tatccttata attccagtac
     2221 ctgatacaac tattcatgca ttatggactc ataaccttga tttattagtt ccaccatatg
     2281 atgttatttt tacaaatgat ccatttacaa tagctttatt tcaagaaaga caaaaaaaaa
     2341 ttattcaacc tttattattt gaaagacaaa aattctcagg aaccaaaatt agagaaaata
     2401 tggttaaaaa agaaaattgg aaaaacttag tccattttga aactgtaaaa gtaatagaag
     2461 aaataaatgg tatagagaga ttaactcttc tatgggaaaa atataaagaa tacatcaatg
     2521 actgactaat tttattttga tagaattaaa ttataatatt tagtaagtta tagttatgtc
     2581 atctaatgat gatcttccat ccattcttga tagtattaag ataggtgata ttgtcaatgt
     2641 ggttttaaat aataattcta ttatatcggg aagatatatg ccacgatatg agtctagtga
     2701 aaaggatcat ataattatta aattaaacaa tggttataat attggtataa agttaaatag
     2761 gataaaatct atcaacaaag tttcttcatt ttctatagta acagaagaac taccagagaa
     2821 gtccctagac aattctataa ctttgaaatc gcaatataga aatgatattg aactctcaaa
     2881 aatgtctaat ttacctaaaa tagctttaat tagtacaggt ggaacgattg ctagtaaaat
     2941 agattacaga acaggaggtg ttacatctgt tttgtcagct aaagatctat atacttcaat
     3001 tccagaactt tctctttatg cttcaatcga tactgaaatt ttatttaatg aatatagtga
     3061 aaatattggt ccaacacatt ggcacttaat agccagtaaa at
//
LOCUS       DATIAS010000644         2888 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_526903, whole genome shotgun sequence.
ACCESSION   DATIAS010000644 DATIAS010000000
VERSION     DATIAS010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2888
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526903"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..795)
                     /locus_tag="VLA74_13075"
     CDS             complement(133..795)
                     /locus_tag="VLA74_13075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51686.1"
                     /translation="MLTHDNVNSYNNDNKLNSITKNLSQGFTQNPSNHTDILEDEELQ
                     EIITRTINSKDLIEKLDWSIRGYELLDYDFQPLFFSSKLTQKYLSIIPDGFKVTLDLA
                     QIGYPDHYAVLVEVGRKSADYYKFSHVFRKIHVPRPDLILEDRLININNGKNSIVLEF
                     NNTGLYNLNVKAELLKKDISNDLSTNFSQGNQFNLLNGKGVLPMDFIANSNYNQKNIV
                     FL"
     gene            complement(789..1028)
                     /locus_tag="VLA74_13080"
     CDS             complement(789..1028)
                     /locus_tag="VLA74_13080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51687.1"
                     /translation="MMITKILNYLQQSSDLDRVYVTSNGTHLEIKFLFNDFANKLKNA
                     LLNSTTVPQNLFINLFIDSDDDETTGFLGIIIDIC"
     gene            complement(1266..2396)
                     /locus_tag="VLA74_13085"
     CDS             complement(1266..2396)
                     /locus_tag="VLA74_13085"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51688.1"
                     /translation="MHFKNYFVVILFALIISSFTEIYNNDFSESHDINKGANTDSNFI
                     QNSYAFHEGYDKDIDETKDFNNKEDNSIFNIAAVGDFDCNGDAEDTIKNIIDRNPELV
                     LALGDFSYNGDAECWLEMIEPIVDKTKIVIGNHEVDSDDLTKDYMNYFGLQEQYYSFN
                     YKNMHFLALSTQTDYDEDSEQYQFALQDLEKYTKDPFIDWIIVFYHDHMYGSGSLEEE
                     TDFRENYHPLFDKYKVDLALQGHHHVYERTYPITFNQEDDDEPIVHNNISNIYKNPIV
                     KKSLTNTFDDKNENFEFLAQYGNPNIYESPKGTVFVTVGTGGAHDMVLSSLEDFSAEG
                     IDGTFGILDIALQADQKTLTGTFIENGKKKEVMDEFKIIKDQ"
BASE COUNT         1031 a          414 c          385 g         1058 t
ORIGIN      
        1 ttaaacgatt cctttcatta acaaggttaa gattcaagta aagtatttta tcgtatatat
       61 tttcgttggt tagtgaatta ttaaaaccag attcgataaa atcattttca cctatgacag
      121 tataagatag ctttagagga aaacaatatt tttttgatta taattagaat tagcaatgaa
      181 atccatagga agtacacctt ttccgtttaa tagattgaat tgatttccct ggctaaaatt
      241 agtcgataaa tcattggaaa tatctttttt tagtagttca gctttcacat ttaagttgta
      301 taaaccagtg ttattaaatt ctagaacaat cgagtttttg ccattgttga tatttattaa
      361 tctatcttct aaaatcaaat ctggacgtgg aacatgtatt tttctaaaaa catgggaaaa
      421 cttgtagtag tctgctgatt tccttcccac ttcaactagt actgcataat ggtcaggata
      481 acctatttga gcaaggtcca aagtgacctt aaacccgtct gggataatag ataaatattt
      541 ttgagtgagc ttggatgaaa agaatagcgg ttgaaagtca tagtctagga gttcatatcc
      601 tcgtatactc cagtcgagtt tttcaattaa atctttagaa tttattgttc ttgttattat
      661 ttcttgtagt tcctcatcct ccagaatatc agtatggttt gaaggatttt gtgtaaagcc
      721 ctgagaaagg tttttagtaa tagaatttaa cttgttatca ttgttataag aatttacatt
      781 gtcatgggtt aacaaatatc tataattata cctaagaatc cagttgtttc gtcatcatca
      841 gaatctataa atagattaat aaaaaggttc tgtggaacag tagtactatt caataatgcg
      901 tttttgagtt tatttgcaaa atcattaaat aaaaatttta tttcaagatg agtaccatta
      961 cttgttacat atactctgtc taaatcacta ctttgttgta aatagttgag tatttttgta
     1021 atcatcatct ggcccataat atatgaaatt ttgaatttcc ttactaagga attcggtttt
     1081 taatttagga gaaattccat atacagtaga atataaaaaa gtaagaccta agaaaaacaa
     1141 taataggaaa atagtaattg caattttcaa taaatgacta tgaattaatt tcaattttaa
     1201 ttattttgta ttatacctac agctttttaa aatcttttaa atatctattt tttcagatgt
     1261 atttactact gatcttttat tattttaaat tcatccatta cttctttttt cttgccattt
     1321 tcaataaaag tgcctgttaa tgtcttttga tctgcttgta atgcaatatc taatattcca
     1381 aaggtaccgt ctatgccttc agccgaaaaa tcttctaagg aagataatac catatcatga
     1441 gctcctccag ttcctacagt tacaaaaact gttccctttg gactttcata aatatttgga
     1501 ttaccatatt gtgctaagaa ttcaaaattt tcatttttat catcaaaagt atttgtcaaa
     1561 gattttttta ctataggatt tttataaata tttgaaatgt tattatgaac tattggttcg
     1621 tcatcatctt cttggttaaa agtaatagga tatgttctct catatacgtg atgatgacct
     1681 tgtaacgcca gatctacttt gtatttgtca aaaagaggat gataattttc tctaaaatca
     1741 gtttcctctt caagagaacc agatccatac atatgatcat gataaaatac aataatccag
     1801 tcaataaaag gatctttagt atatttttca agatcttgaa gagcaaattg atattgttca
     1861 gaatcctcat cataatcagt ttgtgtagat aatgctaaaa agtgcatatt tttatagtta
     1921 aaagaatagt attgttcttg taaaccaaaa taattcatat aatccttagt taaatcatct
     1981 gaatcaactt catggtttcc aattactatt ttggttttat ctactatagg ttctatcatt
     2041 tctaaccagc attcagcatc tccattatat gagaaatcac caagagctaa aactaattct
     2101 ggatttcgat caataatatt ttttatggta tcttctgcat caccattgca atcaaaatct
     2161 cctacagctg caatattaaa aattgaatta tcttccttgt tgttaaaatc ctttgtttca
     2221 tctatgtctt tatcgtaacc ttcatgaaat gcatatgaat tttgaataaa attagaatct
     2281 gtattagctc ctttattgat atcatgactt tcagagaaat cattattgta tatctcagtg
     2341 aaagaagaaa taataagagc aaataaaata actacaaaat aatttttaaa atgcaattat
     2401 gtcagtctta aagtaaatgt aaataattta catttgcaat atttttacga gtaaaatgta
     2461 attaaacaat aaacgataca tagtaagaaa atcactgtct atagagtcga taataaaagt
     2521 aaagattatt tcttagttta cgttaaagtc atttatgaat tctataaaaa ataggatacg
     2581 aaccgaggat actaatccca atcacggcgt ttaactcgtg gagttaattt tgtttaactt
     2641 ttacaagata tatttctaca aatcaaacca attttctata taatgaaatg aaaagtatat
     2701 agtcgatagt atcaacctta atatgattta actatgaatt gatacacatg tcttcaacta
     2761 aaaaagatga tataaaagaa agtaccaacc aatttaagga aaccacagac agatatctag
     2821 aacaacagag acaacaatat aaggatacag catctaacat atctcaaact acagaaaaaa
     2881 ttaatcaa
//
LOCUS       DATIAS010000645         2136 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1209076, whole genome shotgun sequence.
ACCESSION   DATIAS010000645 DATIAS010000000
VERSION     DATIAS010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209076"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..139
                     /locus_tag="VLA74_13090"
     CDS             14..139
                     /locus_tag="VLA74_13090"
                     /inference="COORDINATES: protein motif:HMM:NF013242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51689.1"
                     /translation="MPGIDGVIPVDVYVPGCPPRPETLIQGCMLLQEKIKRSKIK"
     gene            136..663
                     /locus_tag="VLA74_13095"
     CDS             136..663
                     /locus_tag="VLA74_13095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HSF51690.1"
                     /translation="MTTPNNIDEKDSKIKVIETDLKIENSLYNELLLKFQDKVKLIYV
                     RPKRIKVYVDPKNIVEVAAFLKNEFGLDHAESVCGTDYPNENVIEVIYHLNSYSREEL
                     SPIIFALSTKTDRDSSYLPSLLPLFKSVEYHERETYEMLGVYFQGHPRNERFLLPEDW
                     ADIPPLRKDFRIKGR"
     gene            670..1845
                     /locus_tag="VLA74_13100"
     CDS             670..1845
                     /locus_tag="VLA74_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HSF51691.1"
                     /translation="MTSKFNDSFEKKLEDTTKLGLEVVRESAEENLMTLSVGPQHPGS
                     GHFRFIIKVDGDYIVYCDPDPGYVHRGEEKMCEYRNFIQNIPHLERPVIHDSTHITYS
                     YSLAVEELLGIEVPRRGQFIRAIASELNRQVYTLYWLAIYGIFLGHSTMFMWPAGDRE
                     LFIDLLAALTGARVTHAFNIPGGVRNDIPDGFKEKCLKYVSYYEKRLKEYEDIFYNNP
                     LFRQRTENVGILSKENAIKLGVTGSVLRASGIPNDVRKLEPYDVYDEIDFKVQYMKTC
                     DSFARAYVPFLDMRESCNIIRQLLDKMPESGEVRAKLQSNPKGRVGESYKRVESGRGA
                     LSYYIVSDGSSRPYRVKISVGSFRNILALPHLLVGSKLADMPSIYWALNYWPVEADR"
     gene            1849..>2136
                     /locus_tag="VLA74_13105"
     CDS             1849..>2136
                     /locus_tag="VLA74_13105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HSF51692.1"
                     /translation="MATAPKDFRFGNFVGSLVWLIFWVMVIVTLVGLPLIFIILFYVP
                     LPYSNGEVLTPYLFFSMIVDPTRTIPIINFLIHTDIFRAAVFPGFTYAALIA"
BASE COUNT          709 a          308 c          387 g          732 t
ORIGIN      
        1 ttcttataat gttttgcctg gaatagatgg agtaatacct gtagatgttt atgttcctgg
       61 atgtccacca agaccagaga cgcttattca aggttgtatg ttattgcaag aaaaaataaa
      121 aaggtctaaa atcaaatgac aactccaaat aatattgatg agaaagattc aaaaattaaa
      181 gtaattgaaa ctgatctgaa aatagaaaat tcactatata atgaattatt attaaaattc
      241 caagataaag ttaaattgat ttacgtaaga cctaaaagaa ttaaagttta cgtagatcca
      301 aaaaatattg ttgaagtagc agcttttttg aaaaatgaat ttggccttga tcatgctgaa
      361 tccgtttgtg gaactgatta tccaaatgaa aatgtaattg aagttatata tcatttaaac
      421 tcttattcgc gagaagaact ttctccaatt atatttgcac tttctaccaa aaccgataga
      481 gactcctctt atttaccttc tttacttcct ctttttaaaa gtgtagaata tcatgagaga
      541 gaaacttatg aaatgttagg tgtttatttt caaggacatc cacgaaatga acgcttcctt
      601 cttcctgaag attgggctga tattcctcca ttaagaaaag attttagaat taaaggcagg
      661 taaattagtt tgacaagtaa atttaatgat tcctttgaaa agaaattaga agatactaca
      721 aaattgggat tagaagttgt tagagaatct gctgaagaaa atttaatgac cttaagtgta
      781 ggtcctcaac atccaggttc tggacacttt agatttataa ttaaagtcga tggagattat
      841 attgtctatt gtgatcccga tccgggttat gttcatagag gagaagaaaa aatgtgtgaa
      901 tatagaaact ttattcaaaa tattcctcat ttagaacgcc ctgtaattca tgattcaaca
      961 catatcactt attcttatag tcttgcagta gaggaattgc ttggaatcga agtacccaga
     1021 agaggccaat tcattagagc tattgcatcg gaactcaatc gtcaggttta tacattatac
     1081 tggcttgcaa tttatggaat atttttagga cattctacaa tgtttatgtg gccagcaggt
     1141 gatagagaat tatttattga tttgcttgca gcccttactg gcgcaagggt cacacatgcc
     1201 ttcaatattc ctggtggtgt acgaaatgac atacctgatg gttttaagga aaaatgtctg
     1261 aaatatgtat cttattatga aaaaagatta aaagaatatg aagatatttt ttacaataat
     1321 cctttattta ggcaaagaac tgaaaatgta ggtatactat ctaaagaaaa tgcgataaaa
     1381 ttaggagtta caggttcagt cctaagagca tcaggaattc ctaatgatgt tagaaagtta
     1441 gaaccatatg acgtttatga cgaaattgat tttaaagttc aatatatgaa aacctgtgac
     1501 tcatttgcaa gagcatatgt tcctttttta gatatgcgtg aatcatgtaa tattattcgt
     1561 caattacttg ataagatgcc tgaatcaggg gaggtgagag caaaattaca atctaatccc
     1621 aaaggccgtg ttggtgagtc ttacaaaaga gttgagtctg gtcgaggtgc tttatcttat
     1681 tatatagtca gtgatggctc ttctagacct tatagggtaa agatatcagt aggatctttt
     1741 aggaatattt tggctctacc tcatttatta gtaggctcaa aacttgctga tatgccatct
     1801 atatattggg cattaaatta ttggccagtg gaggcggata gataaaaaat ggctacagct
     1861 cctaaagatt ttagattcgg taattttgtt ggctctcttg tttggttaat attttgggtc
     1921 atggtaatag ttacattagt agggctacct ttaattttta tcattttatt ttatgttcct
     1981 cttccttatt ctaatggaga agtacttaca ccttatcttt ttttctcaat gattgtggat
     2041 cctacccgta caattcctat aattaatttt ttaattcata cagatatctt tagagcggct
     2101 gtatttcctg gatttactta cgctgcatta atagca
//
LOCUS       DATIAS010000646         3633 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1209144, whole genome shotgun sequence.
ACCESSION   DATIAS010000646 DATIAS010000000
VERSION     DATIAS010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209144"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            224..1465
                     /locus_tag="VLA74_13110"
     CDS             224..1465
                     /locus_tag="VLA74_13110"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HSF51693.1"
                     /translation="MQTAQLEVNEIRKDFPILSRTINGKRLVYFDNAATTQKPFSVIN
                     AISDYYASYNANIHRAVYQIAEEATDAYEMTRDKVCKFINAHSREEIIFTRNATEAIN
                     LVAYSWGRKAIGKGDTIILSELEHHSNIVPWQMLCKEKKAKIEYLNVDNNGNLDLSKL
                     ESYVQQNNVKLISLCHMSNALGNIIPIESMIKYAHSFGIPFFVDGAQSVPHIRTDVTE
                     LDCDFLAFSGHKMLGPTGVGVLYAKKEILECMNPFIGGGDMIREVHKYETTYNDLPYK
                     YEGGTPNIADVIGFSHALDYLNKIGMDNIRRHELELTRYALECLSSLKGMKLYGDHNL
                     SSRGGIISFNLGDIHPHDLATILNDHGIAIRSGHHCAQILMEKLDVSATSRASFYIYN
                     TREEINIFINALGRAIKLFRL"
     gene            1462..1890
                     /locus_tag="VLA74_13115"
     CDS             1462..1890
                     /locus_tag="VLA74_13115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HSF51694.1"
                     /translation="MSDDIYREIILDHYRNPRNKGKLENADVVIHDSNPLCGDQIDIY
                     LKVKDGNIEDIKFDGRGCAISQASASMLTEMIINKPLTNAKDISKDDILENIGLTNLG
                     PARIKCALLSLKVLKMGMVKYYEDKEPNTAQILEKDSDLY"
     gene            1990..2280
                     /locus_tag="VLA74_13120"
     CDS             1990..2280
                     /locus_tag="VLA74_13120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51695.1"
                     /translation="MSHEEDINKITESMVEDYILLAKEHKFSYRILIPRNEKNNSYAK
                     KIGLNIQLYFLGELRKRKIKVILRDIKYIHDPQHYGWLLLNSEIYEKHMNSE"
     gene            complement(2325..3002)
                     /locus_tag="VLA74_13125"
     CDS             complement(2325..3002)
                     /locus_tag="VLA74_13125"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSF51696.1"
                     /translation="MSETANLRTSKFLIVLISFIGLTFFVHGGITNNVDNLITKIFYN
                     IGGLHNTIDVIVIIISSLGDLFLMVIVGLILTIIRRTRRIGLLVLISIVILSVSTMYI
                     KPLVGRSAPMEQYVPKFHVPDKYTIEKDSMMPISRDLSFPSNHAARAAAFIIILGFWS
                     NVQGKRNIVGRILWIFPLSIGFTRLYLLQNYLFDIVGGSLYGIIVGLVLCRLIKLNRM
                     SEMNKFN"
     gene            complement(3218..3292)
                     /locus_tag="VLA74_13130"
     tRNA            complement(3218..3292)
                     /locus_tag="VLA74_13130"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3255..3257),aa:Met,seq:cat)
BASE COUNT         1294 a          527 c          614 g         1198 t
ORIGIN      
        1 aaattaatta tcaaagatta cataaattgg agaaattcag gagggacatt ttggtcaaca
       61 aaagacagat cataagaatg aattttaagg agcagtcttt gaaattcttg aaaggaattg
      121 ttaactgata cttgcgaaac tttttctaac aaatcaaaac tgatttcttt caaaattttt
      181 ttcaatcaat ttatatttat taattgttat atattcatat attatgcaaa cagcccaatt
      241 agaagtaaat gagattcgaa aagactttcc tattctgtcc cgtacgatta atgggaagcg
      301 attagtgtac ttcgataacg ctgcaactac ccagaaacct ttttctgtaa tcaatgcaat
      361 ctctgattat tatgctagct acaatgctaa tatccatagg gcagtatacc agattgcgga
      421 agaagctacc gatgcatatg agatgaccag ggataaagtt tgtaaattta tcaacgcaca
      481 ttcacgtgag gaaataattt ttacgagaaa tgccaccgaa gctataaacc ttgttgctta
      541 ttcttggggc agaaaagcta tcggaaaagg tgatacgata attctatcag agttggaaca
      601 tcatagtaat atagttccat ggcaaatgtt gtgtaaggaa aaaaaagcaa aaatcgaata
      661 tttgaatgta gataacaatg gaaatttaga tttaagtaaa ctggaatcat atgttcaaca
      721 gaataacgta aaattaattt ctttatgtca tatgtctaat gcgttaggaa acataatacc
      781 gatagaatcg atgataaaat atgcgcattc atttggaata ccattttttg tagatggggc
      841 acagtctgtt cctcatatta gaactgatgt tacagagtta gattgtgact ttcttgcttt
      901 ctcaggacac aaaatgcttg gaccaactgg agtcggtgtc ctttatgcca aaaaagagat
      961 tcttgaatgc atgaatcctt tcataggcgg tggagatatg attagggaag ttcataaata
     1021 tgaaactacg tataatgatt taccctataa atatgagggt ggtactccaa atatcgcaga
     1081 tgtaataggg tttagtcatg cactggatta tttgaacaag attggtatgg ataatattcg
     1141 tagacacgaa ttagagctga caaggtatgc tctcgagtgt ctgtcaagtt tgaagggaat
     1201 gaaattatat ggtgatcata atctttcaag taggggtggc attatatctt ttaatttggg
     1261 tgatattcat ccacacgacc ttgcaactat cctgaacgat catggcattg caattagatc
     1321 cggacaccat tgtgcccaaa ttttgatgga aaaattagac gtgtctgcta catcaagagc
     1381 cagtttctac atttataaca ctcgggagga aatcaatata tttattaatg cgttaggcag
     1441 agctataaag ttgtttcgac tttgagtgac gatatttatc gtgaaattat attagatcat
     1501 tatagaaatc ctcgaaataa aggaaaacta gaaaacgctg acgttgtaat tcacgacagt
     1561 aatcctttat gtggagatca aattgatatt tatctcaagg ttaaagatgg aaatattgaa
     1621 gatataaaat tcgatgggag aggttgtgca attagtcaag caagtgcttc tatgctgact
     1681 gagatgatta ttaacaaacc tttaactaat gcaaaagata tctcgaaaga tgatatttta
     1741 gaaaatattg gtctaacaaa tttgggtcca gctaggataa aatgcgcgtt attgtcatta
     1801 aaggttttaa agatgggtat ggtcaaatac tatgaagaca aagaaccaaa cacagctcaa
     1861 atattggaga aagattcaga tctttattaa tttctaaata aaagtatatc aaataaaaat
     1921 gatatctatt ttcgatttat gaatgactcc ttgtttttta gaaatttccc tgtttataaa
     1981 acagtggaga tgtctcatga agaagatata aataaaatta ctgaaagcat ggtggaagat
     2041 tatattttac ttgcaaagga acataaattc agttaccgaa tcctcatccc tcgtaatgaa
     2101 aaaaataata gttatgcaaa aaaaatcgga ttgaacattc aattatattt tttgggtgaa
     2161 ttgagaaaga gaaagatcaa ggtaatatta agagatataa aatacatcca cgacccacaa
     2221 cattatggat ggttattact aaattctgaa atatacgaga aacacatgaa ttctgaataa
     2281 attcatgaaa gaatgcatgt aagagaaaaa ctagataaaa aattctaatt aaatttattc
     2341 atctctgaca ttctgtttag ttttattaat ctacacagta ctaacccaac tataatccca
     2401 taaagcgaac ccccgactat atcaaacaaa tagttttgaa gcaagtataa tctcgtgaat
     2461 cctatcgata gaggaaaaat ccataatatt cttccaacta tatttctctt tccttgaaca
     2521 ttggaccaga aacctaatat tattataaag gcagcagcac gagctgcgtg attcgacgga
     2581 aatgaaaggt ctctagaaat tggcatcatg ctgtcttttt cgatagtata tttatcagga
     2641 acatgaaatt taggtacgta ttgttccatt ggtgcagatc tccctacaag cggtttaata
     2701 tacatcgttg aaactgaaag gataacaatt gaaatcaata caagcagtcc gattctcctt
     2761 gttcttctaa ttattgttaa aattaatcct actattacca ttaaaaaaag atctccaaga
     2821 gatgaaatga tgattacaat tacatcaatg gtattatgga gtcccccaat attgtaaaaa
     2881 atcttggtta ttaaattatc aacgttatta gttattcctc catgaacaaa aaaagtcaag
     2941 cctataaaag agataagtac gatcaaaaat ttacttgttc taagattggc tgtttcactc
     3001 atgtattctc tatttggtga tattgataaa taataaatag ttaatagtga tttaaatttg
     3061 tagtagtttg aaagaaagaa tcaataaatc tgactcagct ctattgccct tttgcaaata
     3121 gtgttatatt tcaatttatc tttatttctg tatttaatat tcttaattct ttagtcttta
     3181 ttaagagatt tttcaattat atcatttttt aaagaaatgc cggagacggg attcgagccc
     3241 gcgacctttc gattatgagt cgaacgctct aaccaagctg agccactccg gcaaactcag
     3301 aagcgttcaa gaaaatttta atttttgtaa tatatattct attcatatta aaatcggcgt
     3361 catttatgaa gattattctc gcgatttttt ttaaaaatct gttagtatat aaatgcatat
     3421 aaaataatat ataagatttt aaacaatctt cttatcttcc ttgatatttt tatttatgat
     3481 attgtttggc ttaatgtggc tatttgtgtg gcatacctaa agctaatatt tcgagatcta
     3541 ttggctaatt tttgagaatt ataagaatat agttttttaa agcattattt aatgatatcc
     3601 acccttgctt gtattattac tttattataa gaa
//
LOCUS       DATIAS010000647         4273 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1615370, whole genome shotgun sequence.
ACCESSION   DATIAS010000647 DATIAS010000000
VERSION     DATIAS010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4273
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615370"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VLA74_13135"
     CDS             <1..327
                     /locus_tag="VLA74_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51697.1"
                     /translation="ERTVSNNKTISDFISYETAKVLISVIKHIYNSTVKQDVGETNSL
                     ELDKMHDAVNRLGLVVYSKLPYTEIAKLIHGIIHPNLIDVYKLDHININELKTIKGSN
                     NTVSKA"
     gene            482..1933
                     /locus_tag="VLA74_13140"
     CDS             482..1933
                     /locus_tag="VLA74_13140"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSF51698.1"
                     /translation="MISASFVLRFYGVGDSGFNNDETIYVGQAGSLANFDEFREHFSI
                     FRAHPLLMQFFVGLSLLTFGLSETSARLVASIMGTGVVLFSYFIAKFIYSKPIAIVSS
                     LILTFLPYHIIISRQVLVDVSLSFFLMLNILMVVLYLRNNNNLFLYCIGACSGLSFLS
                     KEVGMIVIIATLFVLALDKKINAKNIFIILSTFLLVSSPYWISYLFIEDAQTSINQYI
                     AWQSSRPPNHDNFYYLDILAKESLGYPLLFLVFLFYIYFIVNRKLWNTQIVSIPLVWI
                     PILVLFYQSISIKNYTFLYSVIPLFVIIGTSFVFGSRLSSFRIKILVIIILVPIILIS
                     NAYFLYNFVFLIPHNPILGSESIPYMKDVSLWMKENTPENSTALTLYTHMSNNIKYYS
                     HRDSFSLQSNNNPAYDKIDNADFLIISKKINYLVYEKIQLENAQFLKNEAQKMDKYIK
                     KYNAVPVYISYEYYTDEDGKTLSKPAIIVYSIN"
     gene            2048..4000
                     /locus_tag="VLA74_13145"
     CDS             2048..4000
                     /locus_tag="VLA74_13145"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSF51699.1"
                     /translation="MLFSNQIISPGNLLILESSYSFKENKKNSTQTPIEHVIVISQGG
                     RSFDNYFGTYSGANGFPNNISIPVNSLSNTIDFNNFTVYLDFRLNQSLSKSDQILINK
                     GGIGKENPGNNLNFGVILDKEEKIQAGFETKTGSDHFLTSKQKYNDNRWHSILVSYDG
                     SLLSLYIDKVLISKKNTNAAIPDDNEIPIVRIGSNFLKSNSFFTGDIDNLKIWNRSLT
                     ENEVYSLFNNPEKSYRSLVDFDFSFEPNKIKSAPKNEFISFDGKSYLDIKITPDDHEI
                     QQIKPFTIVDKKTSQLKFDKSVFDISYNYGFMDGFIDAQKTASSDKNETIVMGYYDDK
                     IIGMYWILASYFVLTDNFFSPSPFNDLANNLYLYSADPDIYKKNVPKEGLININNTIF
                     DLLEKNGLSWKIYVENYDPNLNYTKNDETSKRHLMLNPILAIPRFLENPTLNSKIVDL
                     KQYFKDLKDHLPTVSYIISSDSHESSPKDVTKGEEFVTSLIIELMKSTYWKHSVFILT
                     YSSSGGWYDHVIPPKESDYEFGFRIPTMIISPYSKEGFVDSTLYDTASILKFIEYNYN
                     LSALNSRDSSANNLLNAFDFNRERTDAGEIIRKLIEKYESRTFQPKEMDKDENIYLIF
                     ILYASILILIPSLYFSIRFFLKVKNK"
BASE COUNT         1464 a          665 c          628 g         1516 t
ORIGIN      
        1 gaacgcactg tttctaataa taaaactatt tctgacttta tatcatatga aacagcgaag
       61 gtgttgattt ctgttataaa gcacatttac aattctacag taaaacaaga tgttggtgaa
      121 acaaattcat tagaattaga taagatgcat gatgccgtta atcgacttgg attggtggtt
      181 tactcaaagc ttccatatac tgaaatagca aaactcattc atggaataat tcatccaaat
      241 ctcatagacg tctataaatt agatcatatc aacataaacg aattaaaaac aataaaagga
      301 tcgaacaaca cagtttctaa agcataatcg aatcagtact ttattggtcc atgttttaaa
      361 aatctagaaa ggttattaat ttgtaatatc ttctatttgt aacttcaatt tgatcctatc
      421 ttccataaaa aagaataaag tcctctattc cagaagaaca gaagttttta ttttgattac
      481 cttgatttcg gcttcttttg tattacgatt ctacggagtg ggtgattcgg gatttaataa
      541 cgacgaaaca atttatgtag gacaggctgg ttcactggcc aactttgatg aatttcgaga
      601 gcatttttct atttttcgag cacacccttt actcatgcag tttttcgtgg gattatcatt
      661 actgacattt ggattaagtg aaacttcagc taggttagtt gcgtcaataa tgggaaccgg
      721 tgttgtatta ttttcttatt ttatagctaa atttatctat tcaaagccaa ttgcaatagt
      781 ttcctcatta atattgactt ttttaccata ccatattata atttcaagac aagttctagt
      841 cgatgtttcg ttatcttttt ttttgatgct caatatactg atggtggtac tatatttacg
      901 aaataataac aacttatttt tatattgtat aggcgcttgt tctggattat cttttctttc
      961 gaaagaagtc ggaatgattg taataatagc aactctcttt gttttggcgc tggacaaaaa
     1021 aattaatgca aaaaatattt tcattatttt atccacgttt ttactcgttt cttctccata
     1081 ttggatatct tatttgttta ttgaagatgc ccaaacatcg atcaatcaat atatagcttg
     1141 gcaatcttca cggcctccaa atcatgacaa tttttactat cttgatatat tagcaaagga
     1201 aagccttgga tatccacttc ttttcctagt ttttcttttt tatatttatt ttattgttaa
     1261 tagaaagtta tggaataccc aaattgtatc tataccttta gtttggattc caatactggt
     1321 tcttttttat caatcaatat ctataaagaa ttatactttt ttatattctg ttattccttt
     1381 atttgtaatt attggaacat cttttgtctt tggatctcgg ctaagcagtt ttaggattaa
     1441 aatattggtt attattattc tggtgccaat aattttgatt tctaatgctt attttctgta
     1501 taattttgta tttctgatcc ctcataatcc aattttgggc tctgaatcta ttccctatat
     1561 gaaagatgta tctctatgga tgaaagaaaa cactcctgaa aattctacag cattgacact
     1621 ttatacccat atgtcaaata atataaaata ttattctcat agggattctt tttcccttca
     1681 gtctaacaac aatccagctt atgataaaat tgataatgcc gattttctaa ttatctctaa
     1741 aaaaataaac tatcttgtct atgaaaaaat acagttagaa aacgcacaat ttttgaaaaa
     1801 tgaagctcaa aaaatggata aatatataaa aaaatacaat gcagttccag tttatatctc
     1861 atatgagtac tatactgatg aggacggaaa aactttatca aagcctgcga taatagtata
     1921 ttctataaat taaatataat catgactaaa aagttatttt tgtgcatcaa attcttcatg
     1981 tcatctgagg tgaagtgaga caatttattt acacatcatt gccctgtcat ctatattgtt
     2041 gttagtattg ttgttttcga atcagattat ctctcctgga aatttattaa tactagaatc
     2101 atcttattct tttaaagaaa ataaaaaaaa tagtacacaa acacccatag aacatgttat
     2161 tgtgatctct caaggaggta gaagctttga taattatttt ggaacatatt ctggtgccaa
     2221 tggatttcct aataacattt cgatacccgt aaattctctg tccaatacca ttgattttaa
     2281 taattttaca gtgtatcttg actttagatt gaatcaatct ctgtcaaaaa gtgaccaaat
     2341 tctcatcaat aaagggggaa ttgggaagga aaatcccgga aataacctta attttggagt
     2401 aattctcgat aaagaggaaa aaattcaagc tggatttgaa actaaaacag gttcagatca
     2461 ttttctaact tccaaacaaa aatataacga taatagatgg cacagtattc tggtttcata
     2521 cgacggatct ttattgagtc tctatattga taaggtcttg atttcaaaaa aaaatactaa
     2581 cgctgctatt cccgatgata atgaaatacc tatcgttaga attggctcaa attttttaaa
     2641 atcaaactct tttttcacag gagatatcga taatctcaag atttggaata gatctctgac
     2701 agagaacgag gtatattctt tatttaataa tcctgaaaaa agttatcgtt ccctagtaga
     2761 cttcgatttc agctttgagc cgaacaaaat caagtcagca ccaaaaaatg aatttattag
     2821 ttttgatggc aagagctatc ttgatattaa aataacaccg gacgatcatg agattcagca
     2881 gataaaacca tttacaattg tcgataaaaa aacatctcaa ctcaaattcg ataaatccgt
     2941 gtttgacatt tcatataatt atggttttat ggatgggttt atagatgctc aaaaaactgc
     3001 gtcctctgac aaaaatgaaa cgattgtgat gggatattat gatgataaaa ttattggcat
     3061 gtattggatt cttgcatcat actttgtact aaccgataat ttttttagtc catcaccctt
     3121 taacgacctt gctaacaacc tttatcttta ttctgctgat cctgatatat ataaaaaaaa
     3181 tgtacctaaa gaaggattaa taaatattaa taatacaata tttgatttat tagagaaaaa
     3241 tggtttgtca tggaaaattt atgtagaaaa ctacgatccc aacttgaact acaccaaaaa
     3301 cgacgaaact tcaaaacgtc acttaatgtt aaatccaatt ttggcaattc cacgattcct
     3361 agaaaatcct acactgaatt ccaagatagt tgacttgaaa caatatttta aagatttaaa
     3421 agatcatctg ccaactgtgt catatataat ttcctcagat agtcacgaaa gttcgccaaa
     3481 agatgtaacc aaaggagagg aatttgttac ttcattgatt attgagctta tgaaaagtac
     3541 atattggaaa catagcgtgt ttatattaac atacagtagt tcaggtgggt ggtatgatca
     3601 tgttattccc cctaaagaaa gtgactatga atttggtttt aggattccta ctatgataat
     3661 ttcaccatat tcaaaagagg gttttgtaga cagtacattg tacgatactg cttcaatcct
     3721 gaaatttata gaatataact ataatctttc tgctctaaat tcacgtgact cttctgcaaa
     3781 caatcttttg aatgcttttg attttaacag ggaacgcaca gatgcagggg aaattatcag
     3841 gaaattaata gagaaatatg aatcgaggac ctttcaacct aaggaaatgg ataaagatga
     3901 aaatatctat ttgatcttta tattatatgc cagtatattg atactcattc cttctttata
     3961 tttttcaata agattctttc ttaaggttaa aaataaataa ttagtcttct attcaattga
     4021 gagggggtta taaaccagcg aacgctcata agcattctta cagtttacta gaaggatcaa
     4081 gccatgtatt tgattgctcc agcaatattg ttttagtcac tgttgtcata gtaaacagta
     4141 atataatatc gccacaactt caaagatagc aataaagtat attgtttatc tgaatctctt
     4201 ttatgaaacc agtttttccc aagaaatgag aaaaaacggt ttaattatca ttaatgcaca
     4261 ttttagtctc ata
//
LOCUS       DATIAS010000648         4093 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_392042, whole genome shotgun sequence.
ACCESSION   DATIAS010000648 DATIAS010000000
VERSION     DATIAS010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4093
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392042"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            389..1729
                     /locus_tag="VLA74_13150"
     CDS             389..1729
                     /locus_tag="VLA74_13150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51700.1"
                     /translation="MIVSKIFPIVSKFDNKKFLILMIIVIITIMIDSEIGIVADFIPH
                     QLTSIWGIGGFLGIAILFVVSQYFILSYIKQINKENKIRVNPLDVIYTIVSIGQCILA
                     GILVFVILQILTSQQYNLITLYVSHAISYGLWIITLGLLAKAFLSWFRRSNQNVMILI
                     LTLSMIAYVVNGFTSLTSNLDMLIQQKAVILSTDVAYFPEFSIVSLGSQITLVNQIAS
                     GIAYVLTWIGTVKLLYPYIQKLGKIKFWSIMSTAMIYYLISFPLFVLGYFSPSDNIDA
                     MTNIHIFSLSGIFTGIIFGAAFLSVARTLDKKVSLRNEMIIAAYGLLLFYIAGSAMAA
                     QAAYPPYGLVSMSFTGLSCYLIYSGLYSSAVIVSQDSNLRQSIKKTVTEQSKLLDSIG
                     TAHMQQELESRVLTIAKKKSDLMEEETGIEPSMTENEIKDYIKIVTKEIYKSRL"
     gene            2084..2629
                     /locus_tag="VLA74_13155"
     CDS             2084..2629
                     /locus_tag="VLA74_13155"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HSF51701.1"
                     /translation="MRDKLEPITLAGKYIILRPPLLDDLEGLSKAASDGEVWNSHFSQ
                     FPHPNEMQKYIQEMLDLSSKGLILPFITIDKTSNTIVGTTRYLNIDYENYRLEIGHTW
                     IAKSWRRTYVNTEAKFLMLQYAFEKLECIAVEIRTDILNMVSRQAIQRLGAKQDGILR
                     YHKIMRDGRIRDTVCYSIIKP"
     gene            complement(2829..2984)
                     /locus_tag="VLA74_13160"
     CDS             complement(2829..2984)
                     /locus_tag="VLA74_13160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51702.1"
                     /translation="MRSEQEILNKIEELQKIRFQHSRNCQIPLDKCEEAKEYDLLIDV
                     LEWVLES"
     gene            complement(3530..>4093)
                     /locus_tag="VLA74_13165"
     CDS             complement(3530..>4093)
                     /locus_tag="VLA74_13165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSF51703.1"
                     /translation="IYQTITILIRNPPPSGFGGTAIDAGNVQLPFMLLSLIISVLSGF
                     LISKFGNIKPTIIGSIISVIGFSSLFMYHSTEFEIIINLSIIAFGLSLAEVGGFNITL
                     VSVSPKIGGISMGITVLLFLIGMSIGPAIAGIYLETFQSPIMLNEISYYFPSKFSYDM
                     IFFTAALFSFVFLILSIVTAKKLCLQR"
BASE COUNT         1475 a          581 c          621 g         1416 t
ORIGIN      
        1 gcttatgata aatggaaaga tttatcacaa caagaaaaag aaaatgacaa atggaagaaa
       61 gagatattac aaataataaa gaaagataaa taaagataat atagtaaaat tatatactaa
      121 gtattatagt agttctataa aatattaatt taacaagcag tgttttttta catatcttga
      181 cattggtatc ttttcttcta aataaccatt acatgtagaa taatatcaag tgtaaaaata
      241 agagtctatt atagatatac caatccttgt atttagcttt tatgattaga aacttatttt
      301 tatatatata tgctctcaca ttcagcgcgg tttactattt attagaaacc aagagtattg
      361 tttgttaaat aacttgagaa gaccactgat gattgtctcg aaaatatttc ctattgtttc
      421 aaaatttgat aataagaaat ttttgattct catgataatt gtaattatta caattatgat
      481 agattcagaa attggtattg ttgctgattt cattcctcat caacttactt caatttgggg
      541 aattggtgga ttcttaggca tagcaatatt atttgtagta tcacaatact ttattctctc
      601 ttatattaag caaattaata aagagaataa aattagagtc aatcctctag atgtaatcta
      661 taccatagta tcaattggtc agtgtatatt agctggaata cttgtatttg ttattttaca
      721 aatcctcaca agccaacagt ataacctgat aacactgtat gtatctcatg cgattagcta
      781 tggactttgg ataataactt tgggcttgtt agctaaagct tttttatcat ggtttagaag
      841 gtcaaatcaa aatgtcatga tattgatact tactttatct atgattgcct atgtagttaa
      901 tggttttaca agtctaacaa gtaatcttga tatgttgata cagcaaaagg cagtaatact
      961 atcaacggat gtagcatatt ttccggaatt cagtattgtc tcactgggaa gtcaaattac
     1021 gcttgtcaat caaatagctt ctggtattgc ttatgttctt acttggattg gtactgtcaa
     1081 gttgctctat ccatatatac aaaaattggg aaaaatcaag ttttggtcca ttatgagtac
     1141 tgcgatgatt tattatctaa tatcatttcc tctttttgtc ttgggctatt tttctccatc
     1201 tgacaatata gatgcaatga caaatatcca tattttttct ttaagtggaa tttttacagg
     1261 aataatattt ggtgcagcat ttctatcagt ggcaagaaca ttggataaaa aggttagtct
     1321 tagaaacgaa atgataattg cagcttatgg tttgcttctc ttttatatag ctgggtcggc
     1381 tatggcggca caggcagctt atccaccata tggacttgta tccatgtcct ttactggatt
     1441 atcatgttat ttaatatact caggacttta ttcttcggca gttattgtat ctcaggattc
     1501 taacttacgc caatcaatca aaaaaacagt aacagagcaa tcaaagttgc ttgatagtat
     1561 aggtacggct catatgcaac aagaattaga gtctagagtc ttaacaattg cgaagaaaaa
     1621 atcagatttg atggaagaag agacaggaat tgaaccgtca atgacagaaa atgaaataaa
     1681 agactacata aaaattgtta cgaaagaaat ttacaagtct cgactctaac aattgacttg
     1741 aatttagtct atgtaatgta aaatttagaa ttctacttca ttgtaattcg tttactaaaa
     1801 taaaaaagtc tagactagtg agtaataccg atagcggtgt taaaataata gtctattata
     1861 gagactacta acttgtattt agcttttatt attagtaact taattatatt atttggaaaa
     1921 tattgaatgt taaaatgcca aggaagaact aatatgaaag cgataaggtt ccaaaataac
     1981 tctaaaacga aataacatta tctaaaatta atctatattt gatgattaaa attaatactt
     2041 gaaataattt tcatttatat ttatttttaa ttatctaaat tatgtgcgag ataaattaga
     2101 gccaataaca cttgcaggaa aatatattat ccttaggcct ccattacttg atgatttaga
     2161 aggtctttct aaagcagcaa gtgatggaga agtatggaat agtcattttt ctcaatttcc
     2221 tcatccaaat gaaatgcaaa aatatattca agaaatgtta gatttgagct caaagggttt
     2281 aattttgcca tttataacaa tagataaaac ttctaataca attgttggaa ctaccagata
     2341 tcttaatatt gattatgaaa actatcggct tgaaatagga catacgtgga tagctaaatc
     2401 ttggagaagg acatatgtta atactgaagc aaagtttttg atgttacaat atgcatttga
     2461 aaaactagaa tgcatagctg tagaaattcg gacagatatt ctcaatatgg tttcccgtca
     2521 agcaatacag cgattaggtg ccaaacaaga tggcatacta cgttatcaca agataatgag
     2581 agatggaagg ataagagata cagtttgcta tagtattata aaaccataat ggaaacaaat
     2641 aaaagtaaat ccaattgaaa agttgttcaa gtatgataat aataaacaat aatagagagt
     2701 gagaaagaaa ataaagttaa ttccatatag ttttactcat aattaaacag ttgcctctta
     2761 ttctttcatt gtagttttgt tataaagata cagaagctta aactaaagac acacttttaa
     2821 aactattttt aactttccaa gacccattct agtacatcta taagtaggtc atactctttt
     2881 gcctcttcac atttatccaa aggtatttga cagttcctgg aatgctggaa cctgattttt
     2941 tgcagttcct caattttgtt tagaatttct tgttcgcttc tcaacactca tcatcataca
     3001 atccgtagta tgtatctaaa ccattgtttg taagagccat tccaagaata cattcattta
     3061 tttccatata ttgaacttgt gattttggtt cataaccttt ctttatatta tcatcatcat
     3121 tagaatagtc taggcgaaat gtatgactaa tctcaggttt taatatggca aatttttcag
     3181 cgactggagt tttctttaaa agcttaacat ggacttgact taattcacct gtttcatcat
     3241 ctccaagtat tgtagatact gctttttcat tgctctgtga aagtccagaa tatgcattta
     3301 ggttgaggac ttgtctaaat attacatcta accgttgata atattcctaa gcaataccga
     3361 tagcggttct aagagtccac tgtatatact attattttgt atttagcttt tattatgaga
     3421 aactattttt agcttctatt atttagtgaa tgtagaacaa caaggtatgc gaatgattaa
     3481 tatctactac atagtgttaa gagtccaaca tataataata agaacaaatt tatctttgta
     3541 aacataactt ttttgcagtc acaatagata gaattagaaa tacaaatgaa aacaatgctg
     3601 ctgtaaaaaa tatcatatca taagaaaact ttgatggaaa ataataacta atctcattta
     3661 gcataatagg agattgaaaa gtttcaaggt atattccagc tatagctgga ccaatagaca
     3721 ttcctataag aaataaaaga actgtaatac ccattgatat tcctcctatc ttaggtgata
     3781 cagaaaccaa tgtaatgtta aaacctccta cctctgctaa tgataatcca aatgctatta
     3841 tagacaaatt tattattatt tcaaattcag tagagtgata cataaaaaga cttgaaaaac
     3901 caataacact aataatactt cctataattg taggttttat attaccaaat ttcgatatca
     3961 aaaatcctga taaaacagaa attattaaag agagtaacat aaaaggaagt tgtacatttc
     4021 ctgcatcaat tgcagttcct ccaaatccag aaggaggtgg atttcttatt agtatcgtta
     4081 tagtttgata aat
//
LOCUS       DATIAS010000649         2698 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_936716, whole genome shotgun sequence.
ACCESSION   DATIAS010000649 DATIAS010000000
VERSION     DATIAS010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_936716"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VLA74_13170"
     CDS             <1..926
                     /locus_tag="VLA74_13170"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSF51704.1"
                     /translation="KKEEYSCNLSNYAKDLLFLSCCCKVLLLLSYFSKIKLLSTFSNS
                     KSTVLYYISIFENLWKQSDLYEKAENFYEQLKNINETQIQFIKETAHEIRNPIQSILG
                     LAEIMLSNKKLDAGHINDLVRIIIKNAKKINFLTDNILEVARIDSQLLTLNTEEFDLV
                     ESVKDLLKDLNTQIREKKISLILKCNEDSILLFADKFRLNQVFLNIINNAINIIEEGE
                     ITVFLERQDTSNTVLVKIIDGPGIPSDIKDKLFTKFVTGSKSGTGLGLYICKNIIEKH
                     GGKIWANNNVDNEGRETKGSTFAFSLPIKNT"
     gene            1244..1483
                     /locus_tag="VLA74_13175"
     CDS             1244..1483
                     /locus_tag="VLA74_13175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51705.1"
                     /translation="MQISDSFIDTIANQGHNKGELTPYLMFKYAIKTEITRRYYERRL
                     KKFFDFIKFEIVADKDIEFRCNKFAEKAKIIQIGH"
     gene            1590..2528
                     /locus_tag="VLA74_13180"
     CDS             1590..2528
                     /locus_tag="VLA74_13180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51706.1"
                     /translation="MSDISIPWKKITRGLPNARQSANDRASTIEEIKKLLEYPDRRIK
                     PIVYTMITSGMRLGAWDYLKWKHIIPIKDEKGEVLAAKIIVYSGENDEYYSFITLEAY
                     SSLLDWIKFREEYGEKVTEESWLMRDIWQTTNVSYGAKWGLATYPKKLNSYAIKRILE
                     RGLWSQGLRKTLENGEKRHEYKAAHGFRKFYKTRTEQVMRPLNVEITLGHDIGLSGSY
                     YKPTEKEILQDYLKAVDLLTINNNQKVLEKQIIELKENSKDNEYIIKAKLQEKDEQIQ
                     ELKKNDKVKEDALAHLSDQLLFLTERIQEIERKQSK"
BASE COUNT         1098 a          351 c          413 g          836 t
ORIGIN      
        1 ctaaaaaaga ggaatatagc tgtaatcttt ctaattatgc aaaagatcta ttatttctat
       61 cgtgttgttg taaagtgtta ttattattat catatttttc aaaaatcaaa ttactttcaa
      121 ccttctctaa tagtaaatca acagtattat attatatttc tatctttgag aacctttgga
      181 aacagtcaga tctatatgaa aaggcagaaa atttttatga gcaattaaaa aacataaatg
      241 aaacacaaat acaatttatt aaagaaacag cacacgagat tcgaaatcca atccagtcta
      301 ttttaggcct agcagaaatt atgctttcta ataagaaact tgatgctggt catataaatg
      361 atttagtcag aataattata aagaatgcta aaaaaattaa ttttcttaca gataatatct
      421 tagaggttgc tcgtattgac agtcaacttt taactcttaa tacagaagaa tttgatcttg
      481 tagagtcagt aaaagattta ctaaaagatc tgaatactca aattcgagag aaaaagatca
      541 gtttaatttt aaaatgcaat gaagactcaa ttttgctgtt tgcagataaa ttccgtttga
      601 accaagtttt tttaaacatt atcaataatg ctataaatat catagaagaa ggagaaatta
      661 ctgtattttt agaaagacaa gacaccagca acactgtact cgtaaaaata atagatggcc
      721 caggcattcc atcagatata aaggataaac tctttacgaa gtttgtaaca ggttcaaaat
      781 ccggaactgg cctaggccta tacatttgta aaaatattat agaaaaacat ggtggaaaga
      841 tatgggctaa taataatgtg gataatgaag gcagagaaac taaaggatca acatttgcat
      901 ttagtctacc aattaagaat acctaaaata tctaaatttt attttaaata ttaaataact
      961 ttaaacatta tattcaaagc ataacaaaac tttttaatca tgtatagatt ctatatcctt
     1021 aacaattcaa tttcacagaa tgtacttttg cacctcaaat tttttgttat tgtaatacaa
     1081 gaaagtctga acaatttaaa agttctaata cgtaatgttt aattatctgt ttctacttca
     1141 atattttgag tccattttta gtaccaatat cacaacggaa accactggcc ccattacaaa
     1201 cctgtgtctt tatttagacc cgttgtatat agcatggtaa gaaatgcaga ttagcgattc
     1261 ttttatagat actatagcaa atcaaggaca caataaagga gaattgactc cttatctaat
     1321 gttcaaatat gcaattaaaa cagagattac tagaagatat tatgaaagaa ggttgaaaaa
     1381 attctttgac tttatcaaat ttgaaattgt ggcagataaa gacattgaat ttagatgcaa
     1441 taaatttgca gaaaaagcaa aaataataca aattgggcat taagtcaaat aattagattt
     1501 ttacaatatc aaaaaaagag agttgaaaat aaggagttac atctggaaca ctaaaaaatt
     1561 ttgtaaagtc attaaaaata ttatgtgaaa tgtcggatat ttctattcca tggaaaaaga
     1621 ttacaagagg attaccaaat gcaagacaat cagcaaatga cagagcttct actatagaag
     1681 aaatcaaaaa actgttagaa tatcctgata ggagaataaa accaattgtt tacacaatga
     1741 ttacatcagg tatgagatta ggagcttggg attatttaaa atggaaacat attattccta
     1801 tcaaagatga aaaaggagaa gtcttagcag caaagataat tgtgtattca ggtgaaaatg
     1861 atgaatatta ttcttttata acactagaag cctatagctc cttattagat tggataaagt
     1921 ttagagaaga atatggtgag aaagttactg aagaatcttg gttaatgaga gatatttggc
     1981 aaacaactaa tgtaagctat ggagctaaat ggggattagc aacatatcct aaaaaattga
     2041 atagttatgc tattaagaga atattagaaa gaggtttatg gtctcaaggt ttaagaaaaa
     2101 ctcttgaaaa tggagagaaa agacatgaat acaaagcagc ccatggtttc cgtaaatttt
     2161 acaagactag aacagaacaa gttatgcgtc cattaaatgt tgaaattaca ttaggtcatg
     2221 atattggact ttccggttca tattacaaac caacagaaaa ggaaatttta caagattatt
     2281 taaaagcagt agatttactc acaataaata acaatcaaaa agttcttgaa aaacagatta
     2341 ttgaattaaa agaaaacagt aaagataatg aatatatcat caaagcaaaa ctacaagaaa
     2401 aagatgaaca aattcaagag cttaaaaaga atgataaagt aaaagaagat gcattagctc
     2461 atctatcaga tcaattgtta tttttaactg aaagaataca agaaatagaa agaaaacaat
     2521 caaaataata tgtagattta tttattaaga ggattctgtg ggatttgaac ccttccataa
     2581 agtgggacca attacttttg aattcttagt gcgtacaaaa gatattcgct cttatttctg
     2641 aatgtttcag ctactaatta caaaggattt ccatgaacct ttcctctctt gtctttgt
//
LOCUS       DATIAS010000650         9181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_936971, whole genome shotgun sequence.
ACCESSION   DATIAS010000650 DATIAS010000000
VERSION     DATIAS010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 9181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9181
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_936971"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(443..694)
                     /locus_tag="VLA74_13185"
     CDS             complement(443..694)
                     /locus_tag="VLA74_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51707.1"
                     /translation="MISNSFSSLIQQIGPSYDPLFYDVMVYIFGTILFAVFLLGVISF
                     WLRRKGLGGASAKEKWSQELEKYFEREQIGLMPDEKHHW"
     gene            complement(864..1211)
                     /locus_tag="VLA74_13190"
     CDS             complement(864..1211)
                     /locus_tag="VLA74_13190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51708.1"
                     /translation="MNLKLKNMMNRPSILAMTVVILSMGTVFTLVGVQSAMAQYGQAQ
                     SGISSLEEELNLAKQKVSTAQSEGAYGSGTSMVSGGADQTAIFIAVLVAIFGAVAAAF
                     FIMSRSRQREPAK"
     gene            1285..1734
                     /locus_tag="VLA74_13195"
     CDS             1285..1734
                     /locus_tag="VLA74_13195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HSF51709.1"
                     /translation="MARTHAHTHGKSHSIRPAVKDAPSWIVQKPKEIADIIIKFSNDG
                     LSPSEIGLRLRDEYGIPLVKPILGKSVTQVLKDNNIEQSMPEDLNKLVQKALGLQKHL
                     KIHNSDHRNVRSLELIESKIHRISKYYKNSGKIPTTWKYSAVIAQLE"
     gene            1741..3180
                     /locus_tag="VLA74_13200"
     CDS             1741..3180
                     /locus_tag="VLA74_13200"
                     /inference="COORDINATES: protein motif:HMM:NF044564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51710.1"
                     /translation="MVTKEFETILNLFVEKINENIDKNIIIIARKSSDGLAAGSLISS
                     VLLKLDTRITLRLENDLDSDLISRIVLENHDLNIFIDFSFKEFSKINNLLKNKFVIIN
                     HDICPKDLKDYDGKIINPYLYGIDGIAEITSCGLTFLLAERIGRGNKKLSVLAIVSAL
                     AEKQNIGPKKSLIGLNSEIASIATSIGMLNMKADLIFYNLDYRPLHEALAYNISPYIE
                     GITWNKENCYKILKNTGIVTHRNGKFRTFAEISDQEKNMILDAITKFIFLSNPKNEKE
                     NDNIENISESFIGYIFEFPNEDRNSILKNGMEFAFALNSCIKYEKIGLGIGICMGERY
                     NTVKEIEKIVFDYKTNIMNCLEKIFREKWRLLDNDSTVFVNGEGILNEGITNDISIIL
                     SESISFKTKLLFLRTLSNDNSYNFYVKKGIEYGTKKELTSTLQEYLKHDYRIEKNLND
                     DIIVNVPYSMIEEFSSVIRKRISKNENSE"
     gene            3164..3427
                     /locus_tag="VLA74_13205"
     CDS             3164..3427
                     /locus_tag="VLA74_13205"
                     /inference="COORDINATES: protein motif:HMM:NF020899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex subunit Pcc1"
                     /protein_id="HSF51711.1"
                     /translation="MKIQNKNVFKISVNIEVKFSTNKERDVIMKTLLPDNINFPNELY
                     LEMSSIKKSLIIDISSTNISTLINTIDELLHHIKIAKKVIDHD"
     gene            3420..4697
                     /gene="serS"
                     /locus_tag="VLA74_13210"
     CDS             3420..4697
                     /gene="serS"
                     /locus_tag="VLA74_13210"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HSF51712.1"
                     /translation="MIDAKILKNDINRVNDMLQKRNIKFPLEELIEEDTKRRKLLIKL
                     QFERHKKNNIAKIIATKKKDDQAIFSEIKLMDEIGDRIKLLEEEIATVDSKFKSYIRL
                     LPNFFHESVPIGNSESDNIVVREYGTINKFSYNIKDHIDIGIELDLIDIERAAKISGA
                     RFYFLKNELVRLNQALISFALDFLHDKGYTLLQPPYMIRKNSMEGAVILGDFKDVIYK
                     IEDEDLFMIGTSEHAMVSMHMNEILEGSKLPIRYAAISPCFRKEAGAHGKDMKGIFRV
                     HHFEKVEQFVFSRPENSWEEHERMLRITEEFYKKLEIPYRVMLLCSSDLGKISAKTYD
                     IEAWMPAQEKYREIVSCSNCTDYQARSLGIRFRDKTNEETKLVHTLNGTLVATQRTLV
                     SLLENYQNSNGITIPDILQNYMGGTSIIKFKGQ"
     gene            complement(4906..5565)
                     /gene="psmB"
                     /locus_tag="VLA74_13215"
     CDS             complement(4906..5565)
                     /gene="psmB"
                     /locus_tag="VLA74_13215"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000502 - proteasome complex [Evidence
                     IEA];
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal proteasome endopeptidase complex
                     subunit beta"
                     /protein_id="HSF51713.1"
                     /translation="MHLQDNRYSEQIAEQIKKGTTTCAISCTDGVVLAADTRASAGLF
                     IADKKVMKIQKVDNHLGMTIAGGVADAQNLVDTMRYNANIYRISNKRVIPVHSAARLC
                     SNILFNQRYFPYYVQIIMAGYQGSGFGQIYNIDLFGSLTEEKFISTGSGSPVAYGYLE
                     SEFKENMTVKDAYKLALQAIAAAIRRNAGTGDGINVVIIDKNGYRELSKEDKDSVGAI
                     Y"
     gene            5669..7105
                     /gene="leuC"
                     /locus_tag="VLA74_13220"
     CDS             5669..7105
                     /gene="leuC"
                     /locus_tag="VLA74_13220"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HSF51714.1"
                     /translation="MCRTLFEKIWENHIVYPVSKDNGSINPGSHLLYIDRHLIHEVTS
                     PQAFDGLRSNRRKVRRPDLTFATMDHNVPTTNRNLPIVDQISANQIRTLAENCQEFGI
                     ELFDLNHPYQGIVHVIGPELGITLPGTTIVCGDSHTSTHGAFGAFAFGIGTSEVEHVL
                     ATQCLWLTKPKTTAINFIGKPRYLHAISAKDIILSLIRKIGIGGGMGTVFEYRGQIIK
                     KLSMEQRMTICNMSIEAGARGGLIAPDDTTFDYLRDREYSPRGEDYEKMVDYWKNNLR
                     TDDNAIFDRIIDVDINNIAPQVSWGTNPAMTVDVTEVVPSPEEFAKGNEDEKNAAIRA
                     LKYMELKPGIPIIDIHIDRVFIGSCTNSRIEDLIEASMVVKGKKVSQNVHALVVPGSQ
                     SVKLEAEKLGLDKIFKESGFEWRDSGCSMCLGMNPDILAPGERCASTSNRNFEGRQGT
                     GGRTHLVSPIMAAAAAIEGHFVDVRELI"
     gene            7135..7749
                     /gene="leuD"
                     /locus_tag="VLA74_13225"
     CDS             7135..7749
                     /gene="leuD"
                     /locus_tag="VLA74_13225"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HSF51715.1"
                     /translation="MQQFDNFESKFIPFPFANVDTDQIIPKQFLKLTQKTGFGKYLFN
                     DWRYDKDGKAKEDFVLNKLKYLDRSILLTLDNFGSGSSREHAVWALSDYGFKAIISSS
                     FADIFYSNCIKNGILPIVLSKEEIDYLFKNEDLSLKINLDTQEVVLLEHNNPITFKFQ
                     IDSSKKKMLMEGVDEIGLTLQLDASITEYEKTKFSFLPYIKSLN"
     gene            complement(7751..>9181)
                     /gene="tgtA"
                     /locus_tag="VLA74_13230"
     CDS             complement(7751..>9181)
                     /gene="tgtA"
                     /locus_tag="VLA74_13230"
                     /EC_number="2.4.2.48"
                     /inference="COORDINATES: protein motif:HMM:TIGR00432.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(15) transglycosylase TgtA"
                     /protein_id="HSF51716.1"
                     /translation="RYYGDEARKRGIHKIINFEDVVMTDSGGYQVLEYGEIEVEPTDM
                     AEFEIDIGTDIAVPLDKPTGYGLQYNKAVEYVNKTIKNAEETLEVIRRNNINHQKKAQ
                     GKLDTIWAGPVQGAEHLDLVKMSASIFDKMGFNLMALGSPVELMEAYDFAMLSQIIYN
                     LKKVIPFKPIHLFGAGHPLTIPLAVALGCDMFDSASYILYAKDNRYLYSNGTARLNEI
                     TFFPCSCSICNSFTPRELLSLDEKSRTIELAKHNLYVLKMEVNTVKHAILEGRLWEYI
                     MIKAHSHPKLMEAVRSLKNFDNLDYGTPMFKKKAIYFNEPYDQYRPEAKRFREMVTKY
                     ELREKSKILLYPETKIHPFYTSKIFNRIKNKFSEIEIFSYNPYLGIIPAELSDIFPAS
                     HNLISYDSDSENLANEYPTFVNSLEKFLQKNKNNVIIIVANNFMNQVISFVHEYKDTK
                     TKSNVKILNYDEHIGYKGLEKYLKSD"
BASE COUNT         3334 a         1333 c         1472 g         3042 t
ORIGIN      
        1 gcaaagaatt ttagtcattc tttgattgaa aaatatgaaa aacatactgt ctacactgat
       61 gatgttacta gatatccaca atcttgaact tttttacacc taaaacacag aatgtattct
      121 cctttgcaag accctgatag aacgagtaag cagtatttca aatagaaccg atgttttgat
      181 gattattatt catctattaa caataagaac aagaacaaga acaagaacag aaaatgtgat
      241 ctagtacatg tatagaatct gattagattg tttattcatt tatacaatat aacaatcaaa
      301 acaaaaaaat agtttcatta ttcagtaaaa ttaattgcat gttaacagac tctatataat
      361 cacgactata aataaaaaaa attaaaataa gattagtaaa gacgatttat tttgtataaa
      421 aaaccgtcgt cataatgatt ttttaccagt gatgtttttc gtctggcatt aaaccaatct
      481 gttctcgttc aaaatacttt tccaattctt gagaccattt ctctttcgca gaagcaccgc
      541 caagtccttt tcttcgaagc cagaaagaaa ttactccaag aaggaagaca gcaaacaata
      601 ttgtcccgaa tatgtatacc ataacatcgt agaacagcgg atcatagctt ggaccgatct
      661 gttgaataag actgctaaag ctgttactaa tcattgcact gagattggtg atagcaccta
      721 ctaccatatc atatagcaat caaagtctat gatatataca ttttggtgtt ttaattattc
      781 tctgtaatgt aatccaagta caagatatga aaatttacca gatgttattt tgcaatttga
      841 aaaaataaaa aaggttagag ttgctatttc gctggttcgc gttgtctact tctactcatt
      901 atgaagaaag ctgctgcaac ggcaccaaag attgctacaa gaacagcaat gaagatagct
      961 gtttgatctg caccgccact aaccattgaa gtacctgaac catatgcacc ctctgattga
     1021 gcagtggaaa ccttttgttt tgctaaattt aattcctcct cgagagaaga tattccggat
     1081 tgagcttgtc catattgtgc catggcagac tgaactccaa ctaaagtaaa cactgtaccc
     1141 atcgataata ttactacagt cattgccaag atagatggtc tattcatcat attcttcaat
     1201 tttaaattca attatttaac ttttatcata ttgaatataa attttaagta acatttaaga
     1261 tatacaaaaa aattaagtat caatatggct cgtactcatg ctcatactca tggaaagtct
     1321 cattcgatta ggccagcagt aaaggatgca ccaagctgga tagtacaaaa accgaaagaa
     1381 atagctgata ttatcattaa attttctaat gatggattat ctcctagcga gattggttta
     1441 cgtctgagag atgaatatgg aataccgtta gtaaaaccga ttcttggtaa atctgtaact
     1501 caggtactca aagataacaa tattgaacaa tcaatgccgg aagatttgaa taaattggta
     1561 caaaaagcac ttggtcttca aaaacatcta aaaattcaca atagtgatca tagaaatgta
     1621 cgatctcttg aattaattga atcgaaaatt catagaattt caaaatacta caagaatagc
     1681 ggaaaaatac caacaacttg gaaatattct gcagttattg cacagctaga ataaacaata
     1741 atggttacaa aagaattcga aacaattctt aatctttttg tagagaaaat aaacgaaaat
     1801 attgacaaga acataattat tattgctaga aagagttctg atggactagc tgcaggtagt
     1861 cttatttcat cagtgttatt aaagttagat acaaggatta cattacggtt ggaaaatgat
     1921 ttagattctg atctaatttc aagaatagtt ttagaaaatc atgatttaaa tatatttatt
     1981 gattttagtt ttaaagaatt ctcaaagata aacaatttat tgaaaaataa atttgtgatc
     2041 ataaatcatg atatatgtcc taaagattta aaagactacg atggtaaaat aataaatcct
     2101 tatttatatg gaattgatgg aatagcagaa attacatcct gtggattgac atttttactt
     2161 gcagaaagga ttggtagagg aaataaaaaa ttatccgtgt tagcaattgt ttctgcttta
     2221 gcagaaaaac aaaacatagg accaaaaaaa tccctgatag gattaaattc tgaaatagca
     2281 tctattgcaa catcaatagg aatgttgaat atgaaagcgg atttgatatt ctataatctt
     2341 gactatagac ccctacatga agcattggca tataatattt ctccttatat tgaaggaatt
     2401 acttggaata aagagaactg ttacaaaatt ttaaaaaaca ctggaatagt tacacataga
     2461 aatggaaaat ttagaacatt tgcagaaatt tcagatcaag aaaaaaatat gattttggat
     2521 gccattacta aattcatatt tctatccaat cctaaaaatg aaaaagaaaa tgataatatt
     2581 gaaaatatat ctgaaagttt cattggatac atatttgagt ttccaaatga ggacagaaat
     2641 agtatattaa aaaacggtat ggaatttgcg tttgcattaa attcatgtat taagtatgaa
     2701 aaaattggac taggtatagg aatttgtatg ggggaaagat acaacacagt gaaagaaatt
     2761 gaaaaaatag tttttgatta caagacaaat attatgaatt gtcttgaaaa aatattcaga
     2821 gaaaaatggc gcttattaga taatgattct actgtttttg ttaatggcga agggatttta
     2881 aatgaaggaa taacaaatga catttccata atattaagtg aatcaatttc ttttaagaca
     2941 aagttactat ttttaagaac attgtcaaat gacaatagct acaattttta tgtcaagaaa
     3001 ggtatagaat atggaacaaa aaaagaatta acatcgacat tacaagaata tctaaaacat
     3061 gactatcgga ttgaaaagaa tctcaatgat gacattattg ttaatgttcc ttattctatg
     3121 attgaagaat tttcatccgt tattagaaaa agaatatcga aaaatgaaaa ttcagaataa
     3181 aaatgtattt aaaatatcag ttaatattga agtaaagttt tcaacaaata aagaaagaga
     3241 tgtaattatg aaaacattat taccagataa cattaatttt ccaaatgaac tttatttaga
     3301 aatgtcaagt attaaaaaat cattaattat cgatatatca tctacgaata ttagtacatt
     3361 aataaatact attgatgaat tattgcatca tataaaaatt gcgaaaaaag tgatagatca
     3421 tgattgatgc taaaattcta aaaaacgata taaatagagt aaatgatatg ctccaaaaaa
     3481 gaaatataaa atttccactc gaagaactaa ttgaagaaga tactaaacgt cgtaaattat
     3541 taataaaatt gcaattcgaa cggcataaaa aaaataatat tgccaaaata atagctacaa
     3601 aaaaaaagga tgatcaagca atcttctctg agatcaagtt gatggatgaa attggagata
     3661 gaattaaact tcttgaagaa gaaatagcaa ctgttgattc aaaatttaaa agttacatta
     3721 gattacttcc taattttttt catgaatctg tacctattgg gaactccgaa agtgataata
     3781 tcgtcgtaag agagtatgga actattaaca aatttagtta caatataaag gatcatatag
     3841 atatcggaat tgaattggac ttgattgata ttgagagggc tgctaaaata tctggagcta
     3901 gattttattt tttaaaaaat gaattagtaa gactaaacca agcattaatt agttttgcat
     3961 tagattttct acatgataaa ggatatacat tattacaacc accttacatg attagaaaaa
     4021 attctatgga aggagctgta attttaggag attttaaaga tgtaatatac aagatagaag
     4081 atgaggatct gtttatgatt ggtacatctg aacacgctat ggtttccatg catatgaatg
     4141 aaatcttaga aggttcaaaa ttacctatta gatatgcagc aattagtcca tgttttagaa
     4201 aagaggccgg agcacatgga aaggatatga aaggaatttt tagagtacat cattttgaga
     4261 aggtagaaca atttgtattt tctcgtcccg aaaattcatg ggaggaacac gaacgtatgt
     4321 taaggattac ggaggaattt tataaaaaac ttgagatacc ttatagagtg atgttgttat
     4381 gttcatctga tttaggtaag atttctgcca aaacatatga tatagaggca tggatgcctg
     4441 cacaagaaaa atatcgagaa atagtatcat gttcaaattg tactgattat caggctagaa
     4501 gtctaggaat taggtttagg gataaaacaa atgaagaaac taagttagtt catacattga
     4561 atggtacttt agttgctacc caaagaacat tggtatcttt gttagaaaat tatcaaaact
     4621 cgaatggtat aactattcct gacattttac aaaactatat gggtggaact agtataataa
     4681 aatttaaagg acagtaatac taacagtgaa attaattgat tttttgtcca caatactgta
     4741 aatttcaggg catatgagta ttctattcga ataatgatca aatttaccaa aagtatgtat
     4801 ctgtatttga attttcttga tcttagatta tatgatattc ccaaatattt gaaccattta
     4861 ggaatgagaa agaggtattt ttataaacta tcgatagttt aaattttaat atattgctcc
     4921 aacagaatcc ttgtcttctt ttgataactc tctatatcca ttcttatcta ttattacgac
     4981 attaattcca tcaccagtgc ctgcatttct tcttatagct gctgctattg cctgtaatgc
     5041 aagcttataa gcatctttta cagtcatatt ttctttgaat tcggattcta gatacccgta
     5101 agctactggt gaaccactgc ctgtagaaat aaatttctct tcagtaagtg atccgaataa
     5161 atcaatatta taaatctgac caaaaccaga accctgataa cctgccataa taatctgaac
     5221 gtagtatgga aaatagcgct ggttaaacaa aatattagaa cataatctgg ctgcagaatg
     5281 tacaggaata actcttttat tagaaattct gtaaatatta gcattatatc tcatagtatc
     5341 tacaaggttt tgtgcgtctg ccactccccc agcaatagtc atacccaaat gattatccac
     5401 tttttggatt ttcatgactt ttttgtctgc tataaataat cctgcactgg ctctagtatc
     5461 cgcagcaagt acaacaccat ctgtacagga aattgcacat gtagtagttc ccttctttat
     5521 ctgttctgca atctgctctg aatatctatt atcttgtaaa tgcatattaa tcaagaatag
     5581 tcaaattatt actaataagt attttttcat tctttagata ttattatatt atatatgatt
     5641 atattccttc ggtatatcaa atgtatatat gtgtcgtact ttatttgaaa aaatttggga
     5701 aaatcatata gtatatcctg tttcaaaaga taatggatca atcaatcctg gttctcattt
     5761 gctatatata gatcgtcact tgattcatga agttacttct cctcaagcat ttgatggatt
     5821 acgttccaat agaaggaagg ttcgacgtcc tgatctgact tttgcaacta tggatcacaa
     5881 tgtaccaaca actaatagaa atcttccaat tgttgaccaa atttctgcaa accaaataag
     5941 aacattggca gaaaattgtc aagaatttgg aatagaatta tttgatctga atcatcctta
     6001 tcaaggtatt gttcatgtta ttgggccaga acttggtatt actttaccag gtacaactat
     6061 agtttgtggc gatagccata cttccacaca cggtgctttt ggcgcttttg catttggaat
     6121 aggtacaagc gaagtagaac atgtcctagc aactcagtgt ttatggttga ctaaacccaa
     6181 gacaactgca attaacttta ttggaaaacc gagatattta catgcgatat cagcaaaaga
     6241 cattatactt tctcttatac gtaaaattgg tattggtgga ggaatgggta cagtttttga
     6301 atatcgagga cagatcataa aaaaactttc tatggaacaa aggatgacga tttgtaacat
     6361 gtcaattgag gctggcgcca gaggaggatt aattgctcct gatgatacaa cattcgatta
     6421 ccttcgagat agagaatatt caccaagagg tgaagattat gaaaagatgg tggattattg
     6481 gaaaaataat cttagaaccg atgataatgc tatctttgat aggattatag acgtggatat
     6541 taacaatatt gcccctcagg taagttgggg tactaatcct gctatgactg tagatgtaac
     6601 cgaggtagtc ccaagcccag aagaatttgc taaaggaaat gaagatgaaa aaaatgctgc
     6661 cattcgtgca ctaaaatata tggaattgaa gcctggaatt ccaattattg atattcatat
     6721 tgatcgtgtg tttataggct catgtacaaa ctcaagaata gaggatctca tagaggcttc
     6781 catggttgta aaaggtaaaa aagtatcaca aaatgttcat gcattagttg taccgggatc
     6841 ccaatccgta aaattagagg cagaaaaact aggactagac aaaattttca aagaatctgg
     6901 ttttgaatgg agagattctg gatgcagtat gtgtcttgga atgaatcctg atatattggc
     6961 acctggagaa agatgtgcta gtacctcaaa tcgcaatttt gaaggaagac aaggtacagg
     7021 cggtagaact catctagtaa gtccaatcat ggcggcagct gcagccatag agggtcattt
     7081 tgttgatgta cgtgagttaa tataaatatc caactttaaa aagagattat tgctatgcaa
     7141 caatttgata attttgaaag taaatttatt ccatttccat ttgctaatgt tgatacagat
     7201 caaataattc ctaaacaatt tcttaaatta actcagaaaa cagggtttgg aaaatatctt
     7261 ttcaatgact ggcgttatga taaagatggt aaagcaaaag aggatttcgt attaaataaa
     7321 ttgaaatatt tagatcgtag tattctactt acattagata attttggtag tggaagttct
     7381 agagaacatg cggtttgggc tctttctgat tatggtttca aggctattat ttcttcttca
     7441 tttgcagata tcttttatag taattgtatt aaaaacggta tattaccaat agttttatca
     7501 aaagaagaaa ttgactatct tttcaaaaat gaagatctct ctttaaagat caatcttgat
     7561 actcaagaag tagtactttt ggaacataat aatcctataa ccttcaaatt tcaaatagat
     7621 tcctctaaaa aaaagatgtt aatggaggga gtagatgaaa ttggattaac attacaatta
     7681 gatgcaagta taactgaata tgaaaaaact aaatttagtt ttttaccata tattaagagt
     7741 ttaaattaat ttaatccgac tttaaatatt tttctaatcc tttgtaacct atatgctcat
     7801 cataattcaa aattttgaca ttgcttttcg tttttgtatc tttatattca tgaacaaaag
     7861 aaataacttg attcataaaa ttattggcca ctattattat tacattattt ttatttttct
     7921 gtaaaaattt ttctaaagaa ttaacaaaag taggatattc gttcgcaaga ttttctgaat
     7981 cagagtcata agaaataaga ttatgtgacg caggaaatat atccgataat tctgctggaa
     8041 taattcccaa atatggatta taggaaaaaa tttcaatttc actgaattta ttttttattc
     8101 gattgaatat ctttgaagta taaaatggat gtatttttgt ttcaggatat aataatattt
     8161 tagatttttc tctgagttca tattttgtta ccatctctct aaatcttttt gcttcgggtc
     8221 tatattgatc gtaaggttcg ttaaaataga tcgctttttt cttgaacatt ggtgtaccat
     8281 aatctaaatt atcaaaattt tttaaagatc taacagcttc catcaatttt ggatgactat
     8341 gagctttaat cataatatat tcccataatc ttccttctaa gatggcatgt tttacagtat
     8401 ttacttccat ttttaagaca tatagattat gttttgctaa ttcaattgta cgtgattttt
     8461 catccaaact cagtaattct cttggagtaa aagaattaca tattgaacac gaacaaggaa
     8521 aaaaagtaat ttcatttaat cttgctgtac cattggaata taagtatcta ttatcttttg
     8581 catacaatat gtaggatgca gaatcaaaca tatcacatcc aagtgctaca gccaaaggta
     8641 tagttaatgg atgtcctgct ccaaaaagat gtatgggttt aaaaggaatt actttcttca
     8701 agttataaat tatttgagag agcatagcaa aatcatatgc ttccattaat tcaactggac
     8761 tacccaaagc catgagatta aaacccatct tatcaaatat tgatgcagac atttttacca
     8821 aatccaagtg ttctgcacct tgaacaggac cggcccaaat agtatcaagc ttaccttgtg
     8881 ctttcttttg atgatttata ttattcctcc tgattacttc cagagtttct tcagcatttt
     8941 ttattgtttt attaacatat tctactgcct tattgtattg aagtccgtaa ccagtgggtt
     9001 tgtctagcgg taccgcaata tccgttccga tatctatttc gaattctgcc atgtctgtag
     9061 gttcaacttc gatttccccg tattctaata cctggtaacc tcctgaatcg gtcattacga
     9121 cgtcttcaaa attgattatt ttatgaattc ctctttttcg tgcttcatct ccataatatc
     9181 t
//
LOCUS       DATIAS010000651         2101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_392540, whole genome shotgun sequence.
ACCESSION   DATIAS010000651 DATIAS010000000
VERSION     DATIAS010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392540"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..531
                     /locus_tag="VLA74_13235"
     CDS             115..531
                     /locus_tag="VLA74_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51717.1"
                     /translation="MIPHQQQQITTTSMASFDATDIEIQTGLDFILSHFEEEPLFPRK
                     ISTYKSQNKQFQVKNKDDIIKSLKDSNFIDCRISAFPILRDDFTTWTPNLLFIDLDLE
                     DFKTEKQLKSALSTTLRNIKYQMDIQQSYGAEMAII"
     gene            879..1247
                     /gene="priX"
                     /locus_tag="VLA74_13240"
     CDS             879..1247
                     /gene="priX"
                     /locus_tag="VLA74_13240"
                     /inference="COORDINATES: protein motif:HMM:NF033412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase noncatalytic subunit PriX"
                     /protein_id="HSF51718.1"
                     /translation="MRNKNHNNNSSYVHYYEWIDKKILANPFSDYRKIIINLILAPYL
                     IVIKKLSFVECYQIINEWLQKCDLLSGRKLDFKTRSFIDTALTTAYKKQIPPMSIITL
                     KTNYKDLYFLIVQKERERKK"
     gene            1248..1403
                     /locus_tag="VLA74_13245"
     CDS             1248..1403
                     /locus_tag="VLA74_13245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51719.1"
                     /translation="MREKETTNERISFKLCLQSERQKCYSWTNISRMWHNVAHFQLSR
                     EEKDRYD"
     gene            1609..1887
                     /locus_tag="VLA74_13250"
     CDS             1609..1887
                     /locus_tag="VLA74_13250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51720.1"
                     /translation="MLHLYRSLEKKVEDPKISGMEAAKCCEVAASIANNLLRLESECI
                     KAVKQGLVSIGGQGATTNKNNAPPLNNLRKDDVGDDDNDNSSTLVENI"
BASE COUNT          856 a          295 c          341 g          609 t
ORIGIN      
        1 cacctattca ccttccgttg ataatgcacc agtagaagaa gtaaagggat ttcggttgtc
       61 tctaaaagga ccaattcatt acaaaaagcc ggagaagagt gaatttagta aaaaatgatt
      121 ccacaccaac aacagcaaat aacaacaaca tcaatggcgt catttgatgc tactgatatt
      181 gaaatacaaa caggtttaga tttcattcta tcacattttg aagaagagcc attatttcca
      241 agaaaaatat caacttataa aagtcaaaat aaacaatttc aagtaaaaaa taaagatgat
      301 attatcaagt cacttaaaga ttctaatttt atagactgta gaattagcgc ttttcctatt
      361 ttaagagatg attttacaac atggacacca aatcttttat tcattgattt agatctagaa
      421 gatttcaaaa cggaaaaaca actaaaatcg gcattatcta caaccctaag gaatatcaaa
      481 tatcagatgg atatccaaca gtcttatgga gcggaaatgg ctatcatata atgcagccag
      541 tagaatgtcc aatggcttta gaaaatatac aataatttca gaaatttaat aaaccatcac
      601 aagaattttt aagatttgct aaagactttt tttctaatgg taaagcagat aaatcaaatt
      661 atccttcatt taggtcctgt ctattacgta ttccaaattc attcaattca aaatgtctat
      721 ctaaatgtga aagttttgat aattcaaagg taaaaataat tcaagaatgg aatggctata
      781 gagcttcaat tgttgctggt aaaattttat atgattttca aacatattta gtacaaaaaa
      841 agattgatga aagaaatcag agacaaaaaa tacttaatat gagaaataaa aatcataata
      901 ataactcgag ttatgtgcat tattatgaat ggatagacaa aaagatactt gcaaatccat
      961 tttcagatta tagaaaaata ataataaatt taatcttagc accatacttg atagtaatta
     1021 aaaaattatc gtttgtagag tgttatcaaa taattaacga atggttacaa aaatgtgatt
     1081 tattatctgg aaggaaactt gattttaaaa caagatcttt tatagacact gcgcttacca
     1141 cagcatacaa aaaacaaata ccaccaatga gtattataac attgaaaacg aattacaagg
     1201 atttgtattt tttaattgta caaaaagaaa gggaaagaaa aaagtagatg agagagaaag
     1261 agacaaccaa tgaaaggatt tctttcaaat tatgcttaca aagtgaaaga caaaagtgtt
     1321 attcttggac aaatattagt agaatgtggc ataatgtggc acattttcag ttaagtagag
     1381 aggaaaaaga tagatatgat tagcaaacag taatacgagg ctcaacttag acaggttttc
     1441 aaactacttt tagaaggaaa gactcaagaa gaaattgctc gagaactaca tataggagtt
     1501 aggagtgtga gtcgatattg ttctagaata gactaaagat acggacaaat acaggcacaa
     1561 aagacagaca atacactttt caccgaagtc caacttttca ggcatcgaat gctccacctc
     1621 tatagaagtc tagaaaagaa agtagaagat cctaaaatat caggtatgga agcagcaaaa
     1681 tgttgtgaag tagcggcaag tattgcaaat aacctacttc gattagagtc cgaatgtatc
     1741 aaggcagtaa agcaagggtt agtatcaata ggaggacaag gagcaacaac aaataaaaat
     1801 aatgcccctc ctctcaacaa tttaagaaaa gatgatgttg gtgatgatga taatgataat
     1861 agtagtacac tggtcgaaaa catttaatta attagactat aatttagtca tatcaaattt
     1921 ttatatgctg tcttaaattt tagttaatga aaaaggcgtt gaccttaagt ataacaataa
     1981 taatgagcgt attaacaata ggttttttat ctaatccatc catttcatca gcagcagata
     2041 tctctttagt aaacaaagtt tttgctcaag aatcagaaga agtattcatt gtaccaggag
     2101 c
//
LOCUS       DATIAS010000652         2640 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1481533, whole genome shotgun sequence.
ACCESSION   DATIAS010000652 DATIAS010000000
VERSION     DATIAS010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481533"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..864)
                     /locus_tag="VLA74_13255"
     CDS             complement(<1..864)
                     /locus_tag="VLA74_13255"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HSF51721.1"
                     /translation="MSVSTTDTAAASTAAISQLKFPFSLKKDQEEAVEAWIENDFRGT
                     VLYSTGTGKTEIAFECAKRVASSTSSSNSSSRSSFFNILLLVPRITLIEQNIKRLVSY
                     GIPREKIGAHFGERKEIREITVATYQSIIRNLDVIRKSNMVIFDEIHLVSDSAKVFRN
                     IFDTVLEDHKKAILGLTATLDETNLDKYNTILTLLPPVKRYQIKRAVSDKRLAKPIVI
                     PVKVNLTEKEQEDYNTYSSKIKKISNRFKKYDAQSMTVLLKKGGFVSGMAKAWFSNVR
                     KRKLLLSCAENK"
     gene            complement(1593..2228)
                     /gene="hsp20"
                     /locus_tag="VLA74_13260"
     CDS             complement(1593..2228)
                     /gene="hsp20"
                     /locus_tag="VLA74_13260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal heat shock protein Hsp20"
                     /protein_id="HSF51722.1"
                     /translation="MSNRDIIPNDWYKRFFSGRSPFGSWNFDDMFREFDEMRREMSRT
                     FSEQFKNIENKVPKDLIKEYETPEGGKVREVGPIVYGYSMTIGPDGKPNIREFGNVKS
                     PFAGSGGFFQQPSLSSEREPLVDISSTDKEVKIVAEMPGIKKENIKINAYENTVEIIS
                     DDPQRKYHKVIDLPPEADIETVKSKYNNGILEVVFNKKKQTKPKGKEIKVE"
BASE COUNT          786 a          416 c          368 g         1070 t
ORIGIN      
        1 tttattttct gcacaactta acaacagttt cctttttctt acatttgaga accatgcttt
       61 agccattcca ctgacaaagc cacctttttt taataaaaca gtcattgact gagcatcata
      121 ttttttgaaa cggtttgaaa ttttctttat tttagaagaa taagtattat agtcttcttg
      181 ttctttttca gtaaggttta ctttgacagg aataactatt ggttttgcta gtcttttatc
      241 gctaacagct cttttgattt gatatctttt tactggcggt agcaatgtaa gaattgtatt
      301 gtatttatcc agattagttt catctagtgt agcagtaaga ccaagaattg cctttttatg
      361 atcttctaac actgtgtcga atatgtttct aaaaactttt gcagagtcgc ttaccaaatg
      421 aatctcatca aaaattacca tgttggattt acgaataaca tcaagatttc taataatgct
      481 ttgatatgta gctacggtta tctctctgat ttcttttctt tccccaaaat gcgcgcctat
      541 cttctctctt ggtatgccat atgatacaag ccttttgata ttttgttcta tcagggtaat
      601 tctaggtaca agtaaaagaa tattgaagaa agatgatcta ctactactat tagaggatga
      661 tgttgaagat gcaactctct ttgcacattc aaaggctatc tcagttttcc cagttccagt
      721 actatacaag actgtacctc taaagtcatt ttcaatccat gcctcaactg cttcttcctg
      781 atcttttttg agagaaaaag ggaattttag ttgagaaata gcagcagtag aggcggcagc
      841 agtatcagtg gtagaaacag acatttttta ctactattgt aagacaagga atttcatatt
      901 agtatttgta atttaccaag aatttttgaa tactttattt atttgtgggc tttgctgtag
      961 ttcaattttt tttcttttta ccatttgtta attctttgtt gctgtagatc cttagttatt
     1021 ttttctgcta tgtttcattt acaatgaaac atttctttag acaatctctt cttgtgtcat
     1081 aatctaatgg tctaagtttt atgagagaga attatgattt tgttttattg ggatttgttg
     1141 ttgcaatcat caagcgccgc ggcgcttgct attaaattag ataacctttt ttttattcta
     1201 gtcaaagtat tactaagtct atttattgca ttgaaattgg catgacagga ttttcgccgc
     1261 gtcctatacc ttctatagta actgtatcat tttttctatt tattaatatc atatagatag
     1321 gaaattgtta tatctttttt aattagaatc cataacagac gatttaatta attcaataat
     1381 tctattaatc tagttttatc gccatctttg ataatctgaa ttatcaattg tttaaaaaga
     1441 ttcaaatcca taaataatat tttaaaaaag tttatttgaa tataatcaag tattaaacgt
     1501 tttctattat ttttgttgtc caaaatttat ataatttagt aaattatgaa aatcaaaata
     1561 aataaaaata agttaaaaaa aatttcttat tgttattcta ctttaatttc ttttccttta
     1621 ggctttgtct gtttcttttt attaaatact acttccagaa ttccgttatt gtatttagat
     1681 ttgacagttt caatatctgc ttctggtggt aaatctatta ctttatgata ttttctttgt
     1741 ggatcatcac ttattatttc tactgtgttt tcataagcat ttatctttat attttctttt
     1801 ttgatacctg gcatttctgc tacaattttt acttctttat ctgtagatga tatatcaact
     1861 aaaggttctc tttctgaaga aagtgatggt tgttggaaga atcctccact gccagcaaaa
     1921 ggagatttta cgttaccaaa ttctcttata tttggttttc catcaggtcc tattgtcatg
     1981 gaatatccat atactattgg acctacttct ctaacttttc caccttctgg tgtttcgtat
     2041 tctttaatta ggtcttttgg cactttattt tcaatattct taaattgttc agaaaatgtt
     2101 ctactcattt ctcttctcat ttcatcaaat tctctaaaca tgtcgtcaaa gttccagctg
     2161 ccaaaaggac ttcgtccact aaaaaatctt ttataccaat catttggaat tatatctcta
     2221 ttactcattg taatattcgc ctgtataatg taatatttat tacaatatat aaactttatt
     2281 acataattgt gttggtctat ggaatttgtt gttacaatca ctcgcggcgc gctattaaat
     2341 taggcattct ttcttttatt ctagttaaca gcattgtaat gtttcatcta gtgattcttg
     2401 taaaataata ataataatta atttgaccaa ttaattttat aacaatagct ttagctaacc
     2461 ataacataac acatatactg tgtggaatat ttacctcaaa gaaataagca cagaggagat
     2521 gaatgatctt cattggttgc tcgataacga tgatgcagaa tcaggctatc gtgccagaat
     2581 tattttactt agagatgaag gatacacagt accttgagat aagaaaaatt acaaatcatc
//
LOCUS       DATIAS010000653         2199 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_393052, whole genome shotgun sequence.
ACCESSION   DATIAS010000653 DATIAS010000000
VERSION     DATIAS010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393052"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..389)
                     /locus_tag="VLA74_13265"
     CDS             complement(174..389)
                     /locus_tag="VLA74_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51723.1"
                     /translation="MALASVNKIVSKSLIATKTTASSSNFYLPTYTIFLVTAEYVDTS
                     PPFIRCGGPNKIAYSLWPITFFINSFF"
     gene            888..1752
                     /locus_tag="VLA74_13270"
     CDS             join(888..1222,1221..1752)
                     /locus_tag="VLA74_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020489.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSF51724.1"
                     /translation="MIRIPDDLWNEIKNILPDEKPENTIGRPIVPYRKVLDGIVFVLR
                     TGCQWKMLPKEYGSGSTCHRRFQEWMQLDIFDKIWTRLLKIYDHRRGVKWNWQSLDSI
                     SVKSPLGGDKTGHNPTDRGKLGTKRHILTDKNGITLSVVIISANTHDVTVAIDTVDSI
                     IIKRPSSSISSSASTTTSTTNRNKKKQNLCLDKGYRSKGIEQEIINRGYMPHIRHRRE
                     VEKNKLNRRHSARRWVVERTNSWHNRFRKLFTRYEKKEENYLGLVQLANSPYYLQEDN
                     FGIGSKTNEKII"
BASE COUNT          841 a          287 c          356 g          715 t
ORIGIN      
        1 tatagtttct tgaattgagt tttaaattat tgagatattc ccaagacatt aaatagaata
       61 gaaaatgtct atgagcaatt aataccgata gcggtgcaaa aataagcgtc taagtctata
      121 gtaataaaga ggatagtttt atgatttact ttattatata acaaattgct gatttaaaaa
      181 aaggaattaa taaaaaaagt tattggccaa agggaatagg caattttgtt gggaccaccg
      241 catcttataa atgggggtga ggtatcgaca tattcagctg ttactaagaa tattgtatat
      301 gttggtaagt agaaattaga agaacttgct gttgtctttg tggctattaa tgatttggac
      361 acaattttat tgactgatgc cagagccatc tatttgtaag ataaattaga cagatagata
      421 gagaggatat ggtgaagtta gaattgtcat gttatagtaa acaacattat tgattataat
      481 atttaataat ctgaaaaaat atatttaaaa agccatagtc tttcatctat ttctgcattc
      541 taggctatga cttattggaa acactcgata gatgatctat ttctcattag agtaataata
      601 ctttatatct acaaaaaaat acttaaaaat ttactaaacg atctatgaga ttaacagatg
      661 cttatgacat agaagcatca acaatattcg gcaatttatc acattttata tctatatttc
      721 tcaatattaa attcatacta tctatttaaa tattcattat tattattgtg atatatatct
      781 ttgacactaa gagcctatcc caaaaataga tagaaatata gctccttgtt tttatcatct
      841 tatctgttaa atatttgact aaaagtaaaa agaagtctgt tagaacaatt atccgtattc
      901 cagatgatct atggaatgaa attaaaaata ttttgccaga tgaaaagcca gagaatacga
      961 taggtcgtcc cattgttcca tatagaaaag tacttgatgg tatagtattt gttttgagaa
     1021 ctggatgtca gtggaaaatg ttacctaaag agtatggttc tggttctaca tgtcatagaa
     1081 gatttcagga atggatgcaa ttagatattt ttgataaaat ctggactaga ttattaaaaa
     1141 tatacgatca tagaagaggc gtcaaatgga actggcagtc acttgatagt atatctgtaa
     1201 aatcgccttt agggggcgat aactggacat aatccaactg atagaggcaa attaggaact
     1261 aaacgacata tacttacaga taaaaatgga attactttat ctgttgttat aatatctgca
     1321 aatacccacg atgttactgt tgcaattgat acagttgaca gcataattat caaaagacca
     1381 tcatcatcca tatcatcatc agcatcaaca acaacatcga caacaaacag aaataagaag
     1441 aaacagaatc tatgtcttga taaaggatat cgttccaaag gaatagaaca agaaattatc
     1501 aatagaggat acatgccaca catacgacat agaagagaag tagaaaagaa caaactcaac
     1561 cgtagacatt cagcaagaag atgggtagtt gagagaacaa attcttggca taacagattc
     1621 aggaaattat ttacaagata tgaaaagaag gaggagaact accttggtct tgtacaacta
     1681 gccaatagcc cttattattt acaggaggat aattttggga taggctctaa aacaaatgaa
     1741 aaaattattt aaatttccat ttactggttt cattatgttc tttcttgatt gtagttacta
     1801 taactctact tgatgctttg acaagagaag ggttattata agtaactgaa atttatgata
     1861 aatatagctc cttgccctct catcagtgtt ggtaaaagat ctaactttat atcttaacac
     1921 tcatattcaa tcacctagat taaaatatga aaaagaaaaa tttttattat tattgatcag
     1981 tttaatatat aatatttttt ttgttttaat gatctatatt cctcaaaatg aaaaatatag
     2041 tatttcttta aataagaaaa taataaaata agcatcatca tcatgaagca gaaattaaac
     2101 ttagcaatta atggttttgg aagaatagga cgaagtttcc ttcgtgtctg tcttaaagac
     2161 aaagaattta tggatatgat aaatatagta gctataaat
//
LOCUS       DATIAS010000654         2844 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_256861, whole genome shotgun sequence.
ACCESSION   DATIAS010000654 DATIAS010000000
VERSION     DATIAS010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256861"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..901
                     /locus_tag="VLA74_13275"
     CDS             62..901
                     /locus_tag="VLA74_13275"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSF51725.1"
                     /translation="MPKGISLNIGLNSVDPNHYGGWDGKLIACEYDANAMEKIAKSSG
                     CETIKLLTKDATVENIKKHINSAAQNLESGDLFILTYSAHGGQLPDTNNDEGDGYDET
                     WCLYDREFIDDELNVCLRDFKEGVKILTLSDSCHSGTVVKARYIKRTLDVDTMVSNVG
                     KSGIRYRFAPDEVLSQTYYQNKEMYDKILSDLSNKEKKVQASVILISGCQDQELSADG
                     PFNGAFTANLLQVWGNGTFTGNHKKFHKQILNRMMDSDQHPYYFKEGKSNKDFEKSKP
                     FTP"
     gene            1043..>2844
                     /locus_tag="VLA74_13280"
     CDS             1043..>2844
                     /locus_tag="VLA74_13280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51726.1"
                     /translation="MRKNDPYLKLASDEIWRINTGIFGGHLDQDLEYIEFKTRHEEHI
                     NKEKFFESLKFEPDIIHFTGHGDPRGILFEDDDPISVEDLKNFFSGKNVELIFLNACY
                     SDIQAKELENSSQYIIAIKDEIEEGSAMIFAIDFYKEFKESKDISKAFFNAMLKDKIN
                     YNQKQKILQKFHPKDKYKNLEQRLKESVNQLSPFEKAIKKFEIKVIQSKDIPKDLENK
                     IQEVIRIHDESALIINDPVILRNELMNISDILLTLIVAGPEYGIDHLVEYNDMITQTQ
                     TIEEAIKELENKEGIKNKEIERYKKIYDDVVNRVFKKIFYNLKVDSIEKIDPVIPEDS
                     DYDFFPEIVGLMCSILKSLNILRGKINQLFLLDDKFYKDYIIDRFSDFIIHIEFDCNY
                     IIQLLKEELEIDIDDLNLKYHLKISDYVSTLNSQLRTIQADERSIMNIKSNLENSFNI
                     EEKLVKLFRIILVNALESKGKKLFKKKNRRSPEYLNEKFSEIENEKESEEINYREELI
                     KFTNMKDKPVQFFKRLDDLIQKMNKIYKICYNRYPYNDKDIAPLKEMYEILILLKYNL
                     TDYSGKYQYLFLEIAELCDFWNFRLNALEKKHAR"
BASE COUNT         1155 a          340 c          478 g          871 t
ORIGIN      
        1 gatgtcttct acagagtcag atgtacaata aatttaaata atagttttaa aaagacaatt
       61 tatgcctaaa ggtatatcac taaatatagg tttgaatagt gtagatccga accattacgg
      121 aggttgggat ggcaaattga tagcttgtga atatgacgca aatgctatgg aaaaaatagc
      181 aaaatcatct ggttgtgaga caattaaact tttgacaaag gatgctactg tagagaatat
      241 aaagaagcac atcaatagtg ctgcacaaaa tttggagtct ggagatttgt tcattttaac
      301 gtattctgca cacggaggac aattaccaga cacaaataac gatgagggtg atggatatga
      361 tgaaacgtgg tgcttgtacg atcgtgaatt catcgatgat gaattaaatg tttgtcttag
      421 ggattttaaa gagggagtaa agattttaac tctttcagat agttgtcata gtggaactgt
      481 ggttaaagct agatatataa agcgaaccct tgatgtcgat acgatggttt caaatgttgg
      541 taaatctggg ataagatata gatttgctcc tgatgaagta ctgagtcaaa catattatca
      601 gaacaaagag atgtatgata agatattatc agacctaagc aataaggaaa agaaagtgca
      661 ggcttcggtg attcttatat cgggttgtca ggatcaggaa ctttctgcag atggaccttt
      721 caatggtgcg tttacagcta atctgttgca ggtttggggt aatggtacat ttaccggaaa
      781 tcacaaaaaa ttccacaaac aaattttgaa tagaatgatg gattcagatc aacatccata
      841 ttactttaaa gagggtaaaa gcaataagga ctttgagaag agtaaaccat tcacacccta
      901 attattttgt ttttttaatt gagaaaactt tgatggcaat aaaaaaaatt gtaacaaata
      961 acaatgcttt ttaaagtata ttgaaagaag gtgatcgata atttcgaaaa aaaagcaaaa
     1021 gaaaatactg tttatttctg caatgcgtaa aaatgatcca tatctgaaac tagctagtga
     1081 tgagatatgg agaataaata caggtatttt tggaggacat ttagatcagg atttagagta
     1141 tattgaattt aaaactcgtc atgaagaaca tatcaataaa gaaaaatttt ttgagagtct
     1201 taaattcgaa cctgatataa ttcattttac aggtcatggt gaccctagag gaatactttt
     1261 tgaggatgat gacccaatct ctgtagaaga tttaaaaaat tttttttctg gtaaaaatgt
     1321 agaattaatt tttttgaatg catgttattc tgatattcaa gctaaagaac tcgaaaactc
     1381 atcccaatac atcattgcca ttaaagatga aattgaagaa ggttcagcaa tgatttttgc
     1441 tatagatttt tacaaagaat ttaaagaatc aaaagacatt tcaaaagcat tttttaatgc
     1501 aatgttaaag gataaaatta attataatca gaaacaaaag attttacaga aatttcatcc
     1561 aaaagataaa tacaagaatt tagaacaaag attaaaggaa tctgtaaatc agctttctcc
     1621 atttgaaaaa gccataaaaa aattcgaaat taaagttata caaagtaaag atatcccaaa
     1681 agatttggaa aataaaattc aagaagtcat aagaatacat gatgaatcag ccttgatcat
     1741 aaatgatccc gttatactta gaaatgagtt gatgaatata tcagatattt tacttacatt
     1801 aatagtagct ggaccagaat atggtattga tcatttagta gaatataatg acatgattac
     1861 ccaaacccaa acaatagaag aagctattaa ggaattagaa aacaaagaag ggataaaaaa
     1921 caaagagata gaaagatata aaaaaattta tgatgatgtt gtaaacaggg tttttaaaaa
     1981 aatcttttac aatctcaaag tagattctat tgaaaagatt gatccagtta ttccagaaga
     2041 ttcggattat gacttttttc cagaaattgt aggtcttatg tgctccatat taaagtcact
     2101 aaatattcta cgaggcaaaa taaatcaatt atttttatta gatgataaat tttataagga
     2161 ctatataata gacagatttt ccgatttcat tattcacatt gaatttgatt gtaattacat
     2221 aatccaatta ttaaaggagg aattagaaat agatatcgat gatctaaatt taaaatacca
     2281 tctaaaaatc tctgattatg tctcaacttt aaactcccaa ttgcgaacta tccaagcaga
     2341 tgaaagaagt attatgaata ttaaatcaaa tttagaaaat agctttaata ttgaagagaa
     2401 attagtaaag ttatttagaa taattcttgt aaatgcgctt gaatcaaaag gcaaaaaatt
     2461 attcaagaaa aaaaatagaa gatcaccgga atatttgaac gaaaaatttt cagagatcga
     2521 aaatgaaaaa gaatctgaag aaatcaacta tagagaagag ttaatcaaat ttactaatat
     2581 gaaagataaa ccagtgcaat tttttaaaag attagatgat ttaatacaaa aaatgaacaa
     2641 aatatataaa atttgttaca atagatatcc ttataatgat aaagatattg cgccacttaa
     2701 agaaatgtat gaaatactaa tattattaaa gtataatctt actgactatt caggaaaata
     2761 tcaatattta tttctcgaaa tagcagaatt atgtgatttc tggaactttc gacttaatgc
     2821 attagaaaaa aaacatgcca gaca
//
LOCUS       DATIAS010000655         2154 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1616825, whole genome shotgun sequence.
ACCESSION   DATIAS010000655 DATIAS010000000
VERSION     DATIAS010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616825"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(208..816)
                     /locus_tag="VLA74_13285"
     CDS             complement(208..816)
                     /locus_tag="VLA74_13285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51727.1"
                     /translation="MHKKSNKMNLSNPIVIVVVLTLLSSTVVIFFPLVSEQQQDKPSS
                     VLKLAKANVSIDIPTSKGYIDGNIAYFIATDASDEHAVSSITNNTGFPVNYAPLLNNT
                     PESIRGQGYVFLNGVQGEAPGGFQLPVANAVPGDKDYSPLWQTNFVKWNDNATARELK
                     SVEEIVAAQNNGELTITETNIIVNSPAVKWQVGTLQVNQTSK"
     gene            complement(956..1288)
                     /locus_tag="VLA74_13290"
     CDS             complement(956..1288)
                     /locus_tag="VLA74_13290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51728.1"
                     /translation="MMLFKYNLMKNIKTLVVCIISVFILASGNFISKADVFAQVITNS
                     EEESVVYMQLSDILDNTKKSLDDVVQAINSGEKDNALNIISNITMNIKEIENGLNLIV
                     DNPIHGGD"
     gene            complement(1338..1715)
                     /locus_tag="VLA74_13295"
     CDS             complement(1338..1715)
                     /locus_tag="VLA74_13295"
                     /inference="COORDINATES: protein motif:HMM:NF014672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HSF51729.1"
                     /translation="MHLTSNDPWRASIVISDVSNLKNLGYDVTPLLLSIEGVQVGVKN
                     PNHHLNLDNVVANVTNFIKDGGKVIVCGVCLGIAGFEPNEIIDGVIIGTDEITPKLFT
                     NATVVTYQALTYFFKLSSTYDRF"
BASE COUNT          755 a          336 c          267 g          796 t
ORIGIN      
        1 atgtacataa ttggatacaa ttctttgttt ctatgtataa ttatactact acatcaagaa
       61 ataatgagtt tgaaactaat taatggaggt gaatatatct taaattaaca gagccatgct
      121 aatagatgag aatagttaat catttataaa ttcaatatct cttgttaaaa taaaaagatg
      181 ggtttctatc atatttttgc ctatagttta ctttgatgtt tgatttactt gtaatgtacc
      241 aacttgccat tttactgctg ggctatttac aatgatgttt gtttctgtaa tggtaagttc
      301 tccattattt tgagcagcta caatttcttc tacagacttt aattctcttg cagttgcatt
      361 gtcattccat ttcacaaaat ttgtctgcca taatgggctg taatctttat ctcctggtac
      421 tgcatttgca actggaagtt gaaatccacc tggtgcttcg ccctggactc catttaaaaa
      481 tacatagcct tggccacgaa ttgattcagg cgtattattc aaaagtggag cataatttac
      541 tggaaaacca gtattatttg taatagaaga tacagcatgt tcatcagaag catcagtagc
      601 aataaaatat gctatattac catctatgta tcctttagat gttggaatat ctatagaaac
      661 atttgctttt gccaatttca aaacagagct tggtttgtct tgttgttgtt ctgataccag
      721 aggaaagaaa ataaccacag tagaagacaa caaagtcaaa actactacta taactatagg
      781 attggataaa ttcattttat ttgatttttt atgcatctta aaagcattat taaataatac
      841 ttgtattaat atattctttg gaaattaatt aattcttttt gtttaaaaat ataaagagtt
      901 agaaaaatac cacgataatc taaaatcgtg taattgaatt aattactaat ctaatttaat
      961 ctccaccatg aattggatta tctacgatta gatttaaccc attctctatt tctttaatat
     1021 tcatagtaat attggatata atgtttaatg cattatcttt ttctccagag ttaattgctt
     1081 gaacgacatc atctaaactt tttttagtat tgtctaagat atcagacagt tgcatatata
     1141 caacagattc ttcttcacta tttgttataa cttgagcaaa tacatctgct ttagagataa
     1201 aattgccact cgctaaaata aatacactaa ttatacaaac taccaaagtt ttaatatttt
     1261 tcattaaatt atatttgaat aacatcatat aaaaattcct attttatgta acttcaaacc
     1321 tttttaacca tataaatcta aaatctatca taagttgaag ataatttaaa aaaataggtc
     1381 aatgcttgat aagtaactac tgtagcattg gtaaatagtt taggtgttat ttcatcagtt
     1441 ccaattatta ctccatcaat tatttcatta ggttcaaatc cagctattcc taaacagaca
     1501 ccacacacta taactttacc accatcctta ataaaattag taacatttgc tacaacatta
     1561 tcaagattca aatgatgatt aggatttttt acaccaactt gtactccttc tatgctaaga
     1621 agaagaggag taacatcata tcctaaattc tttaggttac ttacatcaga tataacaata
     1681 gaagccctcc aagggtcatt gcttgttaaa tgtatacaat tggattagca tttttttagt
     1741 aatagttttt gaaatatcat cttgtccatg agcatttgat aaaaaaaaca ttcctataac
     1801 taaaatgcca aataacaaaa tcagagaata tttttttcat atcaaaatta tcatacgcca
     1861 tatttaattt tagtatttct aaaataaaca aaataaatcc tttgaaaaag agactttata
     1921 tttaatctca tcagttatca gtataataaa aagtaaaata ctatcagtcc ggtttaccta
     1981 tctatttagc aatcctatcg ggagtagatt agtccatgta gtaggattct actaatttct
     2041 ttcatagatt gctcaatctt ctatttatcg gcataagact cgaacctgca aatctatttt
     2101 ttctttcgta taatattctc caaacatatt gttgaaaatt aaatgtttct cata
//
LOCUS       DATIAS010000656         3459 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1482197, whole genome shotgun sequence.
ACCESSION   DATIAS010000656 DATIAS010000000
VERSION     DATIAS010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1482197"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1077
                     /locus_tag="VLA74_13300"
     CDS             <1..1077
                     /locus_tag="VLA74_13300"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51730.1"
                     /translation="IKSCVGFIDLVDSTKNIATMNNLENIRKYYSTFINSVSEIVKSY
                     NGKIIKNIGDCLLFYFPKTSDNKNVEAFRETIECGFKIIDGRHSINEELFRQHLPPFA
                     YRISIDYGIMDFALVGDDSQIDLFGSTINLCSKINSFLSIPNEIVIGDNIYRILKSFS
                     SIVDEFNFSYNGEYEITQITKYSTYNIKRKKIWILNNRETSNINSITEKQLSSFIEYK
                     NENSFLFMKTNNNKRIIIVDDEQDILFTYRNFLNNYDYQITSFADPYLALNYIRDNQN
                     LDLLVILDIRMKNLNGLQLYQEIKTMKPTIKILFVTALDIIEEILTIAPGLSKEQIMR
                     KPVDKKEFVLCSIKYIIIDKIFFI"
     gene            complement(1174..1413)
                     /locus_tag="VLA74_13305"
     CDS             complement(1174..1413)
                     /locus_tag="VLA74_13305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51731.1"
                     /translation="MSNNFIVPNSKEIIKKEAVGIDESELDEVEEVNVEYIITQTGTM
                     YKDKFYIPKHLVERFDGHYVWFRITGEKGQKLKRD"
     gene            2074..2301
                     /locus_tag="VLA74_13310"
     CDS             2074..2301
                     /locus_tag="VLA74_13310"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF51732.1"
                     /translation="MILLRDEGYTVPEIRRITNHHDNNIRKWIHRFNEKGIHGIISRK
                     HVRDAHKITEDIERKIVEIATNDPRKKGDSN"
     gene            2604..2858
                     /locus_tag="VLA74_13315"
     CDS             2604..2858
                     /locus_tag="VLA74_13315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51733.1"
                     /translation="MVFSTQTKIEKAQKIKGILNTFGVYDHTNDQMYTHCYRRNKTSD
                     QFIDFIRRIDSKYDSSIKTIFIVLDNASIQVKKDKKCNIT"
     gene            2812..3084
                     /locus_tag="VLA74_13320"
     CDS             2812..3084
                     /locus_tag="VLA74_13320"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51734.1"
                     /translation="MHLYRSKKTRNAILRNYPRIVLVFLPTRSPHLNLIEVRWMWLQR
                     KAINNSTFRNESDIGKAVSDWTYNYNTNHRKITRDSLHNELMCLFT"
BASE COUNT         1330 a          465 c          522 g         1142 t
ORIGIN      
        1 ataaaaagtt gtgtaggttt tattgacctg gtagattcaa ctaaaaatat tgctacaatg
       61 aataatttag aaaatattag aaaatattat tctacattta taaattcagt atctgaaata
      121 gttaaaagtt ataatggcaa aatcattaaa aatataggtg attgtttatt attctatttt
      181 cctaaaactt ccgataataa gaatgttgaa gcctttagag agactattga atgtggtttt
      241 aaaattatag atggacgaca tagcattaat gaagaattgt ttagacagca tcttcctcca
      301 tttgcataca ggattagtat agattatggt ataatggatt ttgctttagt tggtgatgac
      361 agtcaaatag atttatttgg atcaacaata aatctttgtt caaagataaa ctcgttttta
      421 tccattccaa atgagatagt cataggagat aatatttata gaattttaaa atctttttct
      481 tctattgtag atgagtttaa tttttcatat aatggtgagt atgaaataac acaaattact
      541 aaatattcta cttataatat taaaaggaaa aagatttgga tactcaataa tagagaaact
      601 agtaatataa actcaataac tgaaaaacaa ctaagttctt ttattgaata taagaatgaa
      661 aatagtttcc tttttatgaa aacaaataat aacaaaagaa taattatagt agatgatgaa
      721 caggatatac tttttactta tagaaatttt ctaaataatt acgattatca gataacttcg
      781 tttgctgatc cttatcttgc actgaattat attagagata atcaaaatct tgatttatta
      841 gtaatacttg atatcagaat gaaaaatttg aatggattac aattatatca agaaataaag
      901 actatgaaac caacaattaa gattctattt gttactgctt tagatataat agaagaaata
      961 ttgactatag ctcctggatt atcaaaagaa caaataatga gaaagcctgt tgataaaaaa
     1021 gagtttgttc tttgttcgat aaagtatata ataattgata aaatattctt tatataaata
     1081 ttttagaaac ttatattgtt ttattatgat gtaaaattca gaaataattg tcttaaatct
     1141 taaaatagac ggtaaaagaa attatcaaag gaattaatct cttttcaatt tttgtccttt
     1201 ttctcctgtt atcctaaacc aaacataatg gccatcaaaa cgttcaacta gatgttttgg
     1261 gatatagaat ttgtctttgt acatagttcc agtttgggtt ataatatatt ctacattgac
     1321 ttcttcaact tcatcaagtt cagattcatc tatacccacc gcttcctttt taataatttc
     1381 cttggaattt ggtacaataa aattattaga cattgtacta attagttagt tatttcatat
     1441 aaataattaa tatattttta aatatagaat attaacaagt ataaaacata tagtcatctt
     1501 aataacaata tttggatcta tagtttttat aaggaaataa aataaatatt tgtatagtcc
     1561 aatataatat agtttctact cttccgccaa tccacagcaa gagttctcac tgccttttct
     1621 ttctgtggat ttttctattt ttcttgttaa tatcctcaaa aatagaaatt aaataatata
     1681 tatataaaat tataaacctc ataagctatg tagaaatcat gatagctaac aacattctac
     1741 agttaattat tgaataaaca acagtttaaa tatttcagat tagcggtcca gttattacgt
     1801 attttcaaac actgcaggat tccactatat ctgcatagaa agagcaatca catctatact
     1861 gtatggcaac agcattgtaa tattccatct agtgattctt gtaaaataat aataattaac
     1921 ttgacaaatg aattttataa caacagcttt agctaaccat aacgttgtcc ctcttgtgtg
     1981 gaatatctac ctcagaaaaa caagtacaga ggaaatgaat gaccttcatt ggttgctcga
     2041 taacgatatg cagaatcagg ttatcgtgcg aaaatgatct tgcttagaga tgaaggatat
     2101 acagtacctg agataagaag aattacaaat catcatgata ataacatacg taaatggata
     2161 cacagattca atgaaaaagg tattcatggt attatatcta gaaaacatgt acgagatgct
     2221 cacaagatta cagaagacat agaaagaaag attgtggaga tagcaactaa cgatcctcga
     2281 aaaaagggag atagcaacta acgatcctcg aaaaaagtac aaactaaaat tctctacatg
     2341 gtcattacgt gtgcttgctg gatacataat ggaagaaaag aaattggtag aaagcatcag
     2401 tcatactgag gtaaagaatg tcctggtaaa acattgtata gagtggcgga attcaaagac
     2461 agtattgggt aaaagtagag atcctgaata cgaattgaaa aaaataggat tgaagaatta
     2521 agatacaata caccttctga ttccatactg ttatatcaag atgagaaagg acggatggca
     2581 gcaaagacat acggtggtca atcttggtgt tctctacaca aaccaagata gaaaaagcac
     2641 aaaagataaa aggaattctc aatacatttg gtgtctacga tcatacaaat gatcaaatgt
     2701 atacacactg ctacagaaga aacaagacca gtgatcagtt tatagatttt atacgacgta
     2761 tagattccaa atatgattct agtatcaaaa caatattcat tgtattagat aatgcatcta
     2821 tacaggtcaa aaaagacaag aaatgcaata ttacgtaact atccaagaat agttcttgta
     2881 ttcttgccaa ccagatcacc ccacctgaat ctaatagagg ttagatggat gtggttacag
     2941 agaaaagcaa tcaacaactc tacatttaga aatgaatctg atattggaaa agcagtatct
     3001 gattggacat ataactataa cactaatcat agaaaaataa ctagagatag tttacataat
     3061 gaacttatgt gtttgttcac atgactggca actcatagta ctagttatag catatagata
     3121 ttcataatta atataggaaa tattaattat ctgaggctgg gtcatattta ttcgattttc
     3181 ataacgaata aagctagtct attggtgtat gatgttttgg tgacaaacta ccatccaatc
     3241 caacaaacta acacagcaga aaagatctac atccattcta attagtattt tgtatttggt
     3301 tggttggatt aggtggctac ataacaataa tagaggacgt ggtagaccac atatgtttat
     3361 tctccaactg ttatcttgag atgttttata gtacgtatat ggtttcgatt agattctaac
     3421 agagcattac atgagtatct tgcaatggat ctatcatac
//
LOCUS       DATIAS010000657         2005 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_120689, whole genome shotgun sequence.
ACCESSION   DATIAS010000657 DATIAS010000000
VERSION     DATIAS010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120689"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1012
                     /gene="nadA"
                     /locus_tag="VLA74_13325"
     CDS             62..1012
                     /gene="nadA"
                     /locus_tag="VLA74_13325"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HSF51735.1"
                     /translation="MSLSKDEYIKEIFSLKKERDAIILAHNYQLPEIQDVADFIGDSL
                     ALSRKAEKTSAKTIIFCGVHFMAETASIICPDKNVLIPDVTAGCSLASSINPTELTYW
                     KKDHPDAIVVSYVNTSAEIKALSDYCCTSSNAVKVVNSISPNNDILFLPDMFLGSYVA
                     EVTKRKNMFIWPGECHVHAGIRAEDINKMMRQYKNAEFLVHPECSCTSSTMYHMAKGD
                     LVNEGHILSTEGMMQRAKNSSKNDFIVATETGILYRMQKENPTKNFIPIRKDAVCQYM
                     KKITIDKVYNSLVNNVYQVKVPQSVSQKARSAIDRMLSIG"
     gene            1209..>2005
                     /gene="nadX"
                     /locus_tag="VLA74_13330"
     CDS             1209..>2005
                     /gene="nadX"
                     /locus_tag="VLA74_13330"
                     /EC_number="1.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF009828.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HSF51736.1"
                     /translation="MKKNISIIGCGAIGSEVALSVDRMMIGNVIISSFLDIKLENAEI
                     LKSKLSNNNPIVFNNFSDYIKSDTLKDVDLVVEAASQNALTSYLNPIILLKKDILVMS
                     VGAFANPDFFSEVIKNVEKNDINLYVPSGAIAGIDAIKSVRNSISYVTLTTTKNPDSL
                     KDSPFFKKTNLTLDSIKKRTLIFEGSAIEAVQNFPANVNVAALLGLAGIGVEKTKVNV
                     IADPSLRINKHEIKVIGKFGELIVRVKNVPSPTNPKTSYLAILSVIES"
BASE COUNT          739 a          278 c          320 g          668 t
ORIGIN      
        1 aaggtgtcct aaatagtact aatttaaatc tagtttaatt ctaatatagt taaaatagca
       61 aatgagttta tcaaaggatg agtatatcaa agaaattttc tctttaaaaa aagaacgaga
      121 tgccattatt ctggcacata actatcaatt acctgaaatt caagacgtag cagattttat
      181 tggagattca ttagctcttt ctcgaaaagc agaaaaaact agtgctaaaa ctattatttt
      241 ctgtggtgtt catttcatgg cagaaactgc ttctattatt tgtccagata aaaatgtatt
      301 aataccagat gtaactgccg gctgctctct tgcttcttct ataaatccta ctgaattaac
      361 atattggaag aaggatcatc cggatgctat agttgttagc tatgttaata cctctgcaga
      421 aattaaagca ttatcagact attgttgtac atcctctaat gctgttaaag tagtaaatag
      481 tatatcacca aataatgata ttctctttct tcctgatatg ttcttaggtt catatgtagc
      541 agaagttacc aaaagaaaga acatgtttat ctggccaggt gaatgtcatg tacatgccgg
      601 tattagagca gaagatatta acaagatgat gagacagtat aaaaatgcag aattcttggt
      661 acatccagaa tgcagttgta catcatcaac tatgtatcat atggctaagg gtgatttggt
      721 aaatgagggt catattttat ctactgaagg aatgatgcaa cgagctaaaa attcatctaa
      781 aaatgatttt attgtagcta ctgaaacagg gatattatat agaatgcaaa aagaaaatcc
      841 gacaaaaaat tttattccaa ttagaaaaga tgcagtctgt cagtacatga aaaaaattac
      901 tattgataaa gtttacaatt cgttagtaaa taatgtatac caagtaaaag ttccacaatc
      961 agtatctcaa aaggctagat ctgcaataga taggatgtta tcaattggtt aatacttttt
     1021 atatatttga ttcctgctta gaaaacaaaa acaatctatt aattatgacc atatataagt
     1081 actttacatc gataaaaaga atgttattat aattaagaga ctttaaattt tttagaccaa
     1141 aaaataatcc aggattaatt ttaggaaact attttaattg ataatttgaa gatctttatt
     1201 aacaattcat gaaaaagaat atatcaataa taggttgtgg tgctatagga agtgaagtcg
     1261 cactttctgt agatagaatg atgataggaa atgtaattat ttcatctttc cttgatatta
     1321 aacttgagaa tgctgaaatt cttaagtcaa aattatcaaa taataatcca atagtcttta
     1381 acaatttttc tgattacatc aagtctgata ctttgaaaga tgtagatctc gtggtcgaag
     1441 ctgcatctca aaatgctctc acaagttatc ttaatccaat tattttatta aaaaaagata
     1501 tactagttat gagtgttggt gcctttgcta atccagattt cttttctgaa gtgataaaaa
     1561 atgtagaaaa aaatgatatc aatctttatg ttccatcagg agctattgct ggcatagatg
     1621 ctattaagag tgttagaaat tcaataagct atgttactct tacaactaca aagaatccag
     1681 attctcttaa agattctcca ttctttaaaa aaactaattt aacattagat tctattaaaa
     1741 aaaggacttt gatttttgaa ggatcagcta ttgaggcagt ccaaaatttt cccgctaatg
     1801 taaatgttgc agcattgtta ggtcttgctg gtataggtgt tgaaaaaaca aaagttaatg
     1861 taattgcgga tccgtctctt cgtattaata agcatgaaat caaggtaata ggaaaatttg
     1921 gagaattgat agtaagagta aaaaatgttc ccagtcctac taatccaaaa acaagctatt
     1981 tagcaatact atctgtcatt gaatc
//
LOCUS       DATIAS010000658         3369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_394060, whole genome shotgun sequence.
ACCESSION   DATIAS010000658 DATIAS010000000
VERSION     DATIAS010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394060"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..1221
                     /locus_tag="VLA74_13335"
     CDS             289..1221
                     /locus_tag="VLA74_13335"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSF51737.1"
                     /translation="MKNNLPTINKIEDWKIYRRAIEASKEPIFKKSIPTEFNIEAFEL
                     LKSKKIEEYNNRRRNGEFRELNLVKAYLGGADLSGADLDRANLYEADLGGVNLENADL
                     SGADLRNAFLRHANIRNARLVYANLEHANLSGAILIGANLEDAQLSNALLNTANLENA
                     KLEGDDLRGADLEGAYLRNTDLSNTDLRGTNLRSANLQRAILRGVNLNGGNLRASNLN
                     LADMRGADLSKSLLYDITQYENLLLDNTTKLNNSILNDQKLVNYLISKKPDLRYTKIT
                     NKNMLKDFMKKNEFAQHVMKYILDLDFSEIIVLE"
     gene            complement(1561..>3369)
                     /locus_tag="VLA74_13340"
     CDS             complement(1561..>3369)
                     /locus_tag="VLA74_13340"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HSF51738.1"
                     /translation="VYTNVTEKPHDTVLDSWDNNLGINASNLSSYFEMARGFIGVNKI
                     ATTSSIGDIKLPKSKVFQEAAEKIRKQSPLIVTNKSTFDTDDPGQDPTKYEEDIYAVD
                     LSITDIPYRKDENTIFKKSPLLLDGAGNYSYSTILNAIEGTPPNPPLNEFLRKKLAYL
                     LRKHFPETNVCQRQGRCAIGCIPGARHTNNKKIYDYLRDPKKKEHLDVYALCEVYDIE
                     PLPLPGGSFKYRVYYNDYGARDWKQANFNWNTGPNSYKLKIRLFRLVDSGRKKTIECK
                     QLILGAGAIGSTEILLKSLNTTRQTGQKLVLSDRLGKDYSTNGDLLGVINPTKTDIHA
                     TLGPIVTSAIKFNEGSGFVYTIEDSNIPKMFAGVSRLVSQSSSFRRLLANVGTGRIQQ
                     IISMITQNPSGIPLPNINFSFQISEQDLSKTLLLAGMGTDTSDGIIKLQDAWKNNPNR
                     DMTAWNVLDVNFDMNKLVPLFNKMRHSMERIAKEVGEKGSASFSTPLWNPNNTNENLT
                     IVLHNLGGCSMGKDRNSGVVNNFGQVYKGNGSSLTETYNDFYIVDGGIVPSSIGVNSS
                     LTISALAFRIAENLVGHSNLPIEEITIGTKTFYFPQ"
BASE COUNT         1177 a          497 c          527 g         1168 t
ORIGIN      
        1 ttgttgcttt tgaaatattt ttttcgaaga agaattttaa tgctaatgaa ttattaataa
       61 tataaataat tcagttaaga tggaataatt tttttagttt attgataaat tctgaagata
      121 agtttcgtaa aaaaattact ctttgaaata aatagtatta taaaacttga tgaagacaca
      181 tttacacaaa ttttagatac tggcgtagta aaagaagccg agaagtttga tacaaaaata
      241 ataaaactgt tacgtccttt taaaagtgat atcgatttat gggatttttt gaaaaataac
      301 ttacctacta taaataaaat agaagattgg aaaatatata gacgggcaat tgaggcaagt
      361 aaagaaccta tattcaaaaa aagtatacct acagaattta atatagaggc atttgaatta
      421 ctaaaaagta agaaaataga agaatataat aatagaagaa gaaatggaga gtttcgtgaa
      481 ttaaacttag taaaggctta tttaggtgga gcagatctaa gtggtgcaga tctagatcga
      541 gcgaatctat atgaagcaga tctaggtggt gtgaatctag aaaatgctga tctaagtggt
      601 gcggatctaa ggaatgcatt tttaaggcat gccaatataa ggaatgctcg attagtttat
      661 gctaatttag aacatgctaa tctatctggt gctattttaa ttggggcaaa tctagaggat
      721 gcacagttat caaatgctct tctaaatact gctaatctag aaaatgctaa actagaggga
      781 gatgatttaa gaggtgctga tttagagggt gcgtatctac gtaatactga tctaagtaat
      841 actgatctaa ggggaactaa tttaagaagt gcaaatctac agcgtgccat tttaaggggt
      901 gtcaatttaa atggcggcaa tttaagggct tcaaatctaa atcttgctga tatgagaggt
      961 gctgatttgt caaaatcatt attatatgat ataacacaat acgagaattt acttttagat
     1021 aatactacaa aattaaataa ttctattcta aatgaccaaa aactagttaa ctatttaatt
     1081 agtaaaaaac cagatctccg atatacaaag atcacgaata aaaacatgct aaaggatttc
     1141 atgaaaaaaa atgaatttgc acaacatgtt atgaaataca tattggattt agatttctct
     1201 gaaataattg tattagaata atattttaat attcgaaagt agaacccaca attaatggac
     1261 gaaggttcga gtcccaatcc gagaattgaa ttattacaag taatcgtact aagataaaag
     1321 ttctaaccac aacctatatt ttagaatata aatttcttga tagacaagtt tcctacagta
     1381 attagaataa taaattaaga cagatatagt aataactttc tctaattaga ggcaaaaatg
     1441 cctcgcaacc cgacgagact attccagaaa tgctattaat ctggatagat ttgtacaata
     1501 atctacagat gataaaaaat tactaaaata tatacagttt ttgacttagt ccaagtaaat
     1561 ctattgaggg aagtaaaaag tttttgttcc tatggttatt tcttctattg gcagatttga
     1621 atgacccacg aggttttctg caattctaaa tgctaatgca gagattgtta aagaagaatt
     1681 aactccaata gaagaaggca ctattccacc atcaacaata taaaagtcat tatatgtttc
     1741 tgttaaagaa gaaccattgc ctttatagac ttgtccaaaa ttattaacaa ctccactatt
     1801 cctatcttta cccattgagc atcctcctaa attatgtagt acaattgtca agttttcatt
     1861 tgtgttatta ggattccata atggagtaga aaaacttgct gaaccttttt cacctacttc
     1921 ctttgctatt ctttccattg aatgtctcat tttgttaaac aatggtacaa gtttattcat
     1981 atcaaaattg acatctaaaa cattccaagc agtcatatcc ctatttggat tattcttcca
     2041 agcatcttgc agttttatta taccatctga tgtatcagta cccattccag caagaagtaa
     2101 agtttttgaa agatcttgtt ctgagatttg aaatgagaaa ttaatatttg gtaaaggaat
     2161 tccagatgga ttctgagtga tcattgatat tatttgttgt attctgcctg ttcccacatt
     2221 tgcaagtaat ctcctaaatg aacttgattg tgatactaac cttgatacac cggcaaacat
     2281 tttaggtata ttactatcct ctattgtata tacaaatcct gagccttcat taaattttat
     2341 tgcagaggtt acaatagggc caagtgttgc atgtatatcg gttttagtag ggtttattac
     2401 acctaataaa tctccattag ttgaataatc cttaccaagt ctatcactta gaacaagttt
     2461 ctgacctgtt tgacgagtag tgtttaatga tttgagcaaa atttctgtac ttcctattgc
     2521 tccagcacca agaatcaatt gtttgcattc aattgttttt tttcttccac tatcaactaa
     2581 tctaaataat cttattttta gtttatatga atttggacca gtattccaat taaaatttgc
     2641 ttgtttccaa tctctagcac cataatcatt gtaataaact ctatacttaa aagatcctcc
     2701 tggtagtggt aaaggttcta tatcataaac ttcacataat gcataaacat ccaaatgttc
     2761 cttctttttt ggatctctta gataatcata tattttctta ttatttgtat gtctagcacc
     2821 aggaatacat cctattgcac atcttccttg acgttgacat acatttgttt ctggaaaatg
     2881 tttccttaat agataagcca gtttttttct taaaaattca ttcaatggtg gatttggtgg
     2941 agttccttca attgcattta atatagtgga atatgaataa tttcctgctc cgtctaaaag
     3001 taaaggtgat tttttaaata tagtattttc atcttttcta taaggaatat ctgtaataga
     3061 aagatctact gcgtaaatat cttcttcata ttttgtagga tcttgtccag gatcatcagt
     3121 atcaaatgta gatttattgg taacaattag tggagattgt ttccttattt tttctgcagc
     3181 ctcctgaaaa acctttgatt taggaagttt aatatcacct atagatgacg tagttgctat
     3241 cttatttaca ccaataaaac cacgtgccat ctcaaaatat gaagacaaat tggaagcatt
     3301 tatcccaaga ttattatccc aagaatctag gacagtatcg tgtggttttt ctgtaacatt
     3361 tgtataaac
//
LOCUS       DATIAS010000659         3481 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_394227, whole genome shotgun sequence.
ACCESSION   DATIAS010000659 DATIAS010000000
VERSION     DATIAS010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3481
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394227"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1539
                     /locus_tag="VLA74_13345"
     CDS             106..1539
                     /locus_tag="VLA74_13345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51739.1"
                     /translation="MNQDFWHNIFRYKEYGFEPLNWIANFSNEMDQDVFENSINRIKG
                     TNAKFTPDWIEYFIKCEGKVPELTRRFYDFTDSEVSQSETGIKKALTIICMNSDISED
                     AEKRFSLLYNFISGFKSKFNTKKVTVLSTSSKKQFALLDFIETRRGNKIGYILANNYV
                     TQVTDVMDIPESEIHTQITVSGAIENLNLLGCTSEFRIFPIYDGPTEEILDITRKNFD
                     LFTLSNNIYMEDYPSLKIGNLFFGATSTATTLKELPLRYEDTEEGMNLIITDKFGSII
                     PLNLFLLTQINEENISLFEKNGISYETLKHTKDMIFKNLVHPRFELGKIINKYCPDFG
                     EKYDKSQHITAVFPILTKGLLAIKLLSRYTDSEITIQKIPVKYHDIACYAVKEYFLQN
                     PTSSVNGCHAIIASRELTDSIIQDLKKINLEPEVIGSIGRKGKAFLDIRDINFDKYFV
                     PRSKMHKKLRSFRPKEPNKNMMETKRN"
     gene            complement(1609..2436)
                     /locus_tag="VLA74_13350"
     CDS             complement(1609..2436)
                     /locus_tag="VLA74_13350"
                     /inference="COORDINATES: protein motif:HMM:NF000796.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HSF51740.1"
                     /translation="MELHTDIDSIRTVVIEQVIEETPSIKTLIFKDPLSYNAKPGQFL
                     MVWIPRIEELPMSVMFSKKSGYAAVTIRKHGIGSTALFNKKLNDVIGIRGPYGNSFSI
                     NNNAKNVMLAGGGTGLVPLMRFANFLTNSKIKYTLIIGAKTKNEVLFYNLAKQLVSKT
                     SNKIIVTTDDGTFGMKGKVTDAIKYIINKEKFDFIYTCGPEMMMKNIFTISLDYSIRF
                     QASLERYMKCGIGICASCCIGDKLVCTDGTIFNEKQLSKMPEFGTFFRDKSGRKSRY"
     gene            complement(2414..3364)
                     /locus_tag="VLA74_13355"
     CDS             complement(2414..3364)
                     /locus_tag="VLA74_13355"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF013355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HSF51741.1"
                     /translation="MKYQPALTNLKKSSDPNDLSIEIAGMHFRNPLLLASGFLGISQE
                     IFNRLYRSGLGAVVSKSISVDPMEGYKGPTIVSINQKSYLNAIGLSNPGADAFSEEIS
                     NNTVPLIVSLVGSSAIEFPNLIKKFDKLNILGYEINLSCPHVAKMGMEVGDDPTLVTK
                     IIKTIKANTKKPVIIKVGIGNVDVVKLADIIEESGADAITAINTIRAMAINTETGMPI
                     LSNKIGGLSGSSIKPIGVRCVYEISKKVSIPVIGCGGIMNWEDVIEYMLAGATTVELG
                     SVIGYHGLGVINKIIKGISGYLDKKGYKSIKEIIGIAHRY"
BASE COUNT         1182 a          595 c          530 g         1174 t
ORIGIN      
        1 tttacaactt tcttttctgt agatttcgaa tgaaaagagg ataatggaat gcttaaaata
       61 tctatatttt aaatatcatt atattaaacc atatattgga ttatcttgaa tcaagatttt
      121 tggcataata tatttagata taaagaatat ggttttgaac ctcttaattg gattgctaat
      181 ttttctaatg aaatggatca ggacgtattt gaaaattcta taaataggat taaaggtaca
      241 aacgccaaat ttacaccaga ttggattgaa tatttcatta aatgtgaagg aaaagtccct
      301 gaattaacaa ggagattcta tgatttcaca gattcagaag tttcacaaag cgaaactgga
      361 attaaaaaag cattgacaat catttgtatg aatagtgaca ttagcgaaga tgcagaaaaa
      421 agattcagtc tgttgtataa ttttattagt ggttttaaat ctaaatttaa tacaaaaaaa
      481 gtaacagtat taagcacttc atcaaaaaaa cagtttgcat tattggattt tatagaaaca
      541 agaagaggaa ataaaattgg atacatactc gcaaataatt atgtcacaca ggttactgat
      601 gtgatggata tacctgaatc agaaattcat actcagatta cagtatcagg cgccatagaa
      661 aatttaaacc ttctagggtg tacctctgaa tttagaatat ttccaattta tgatggacct
      721 acagaagaga ttctagatat tacaagaaag aattttgatt tatttacact ctcaaacaat
      781 atctacatgg aggattatcc ttctctgaaa ataggaaatc tcttctttgg tgcaacatct
      841 actgcaacta cactcaaaga actacccttg agatatgagg atacagaaga aggaatgaat
      901 ttaataatta cagacaaatt cgggtcgata ataccactca atttattcct attaacacag
      961 atcaatgaag aaaatatttc attgtttgaa aagaatggaa tttcttatga gaccttgaaa
     1021 cacactaagg atatgatttt caaaaacttg gttcacccga gatttgagct gggaaagatt
     1081 attaacaaat attgtccaga ttttggagaa aaatacgata agtctcaaca tattactgca
     1141 gtatttccca ttctgacaaa aggattattg gctataaaac tcctgtctcg atacacagat
     1201 agcgagataa cgatacagaa gattccggta aaatatcacg atattgcttg ctatgcagta
     1261 aaagaatatt ttttgcaaaa tccaacctct tcagttaatg gttgtcatgc gataatagca
     1321 agcagagagt tgacagattc gataattcaa gatttaaaaa agataaatct cgaaccagag
     1381 gttataggaa gtattggtag gaagggaaag gccttccttg atataagaga catcaatttt
     1441 gataaatatt ttgtgcctag atcaaaaatg cacaaaaagt taagatcctt tagaccaaag
     1501 gagccaaaca aaaacatgat ggagaccaaa agaaattaaa aactaaatta gataggatct
     1561 tcttactgat ctgcctattt attgtctggg ataatattag atatattttc aatatctgga
     1621 tttacgtccg gatttatccc taaaaaatgt gccaaactcg ggcattttag acaattgttt
     1681 ttcattaaat attgttccgt cggtacatac aagtttatca ccaatgcaac agctggcaca
     1741 tattcctatt ccgcatttca tatatctctc cagactggcc tgaaagcgaa tggaataatc
     1801 caaagatatt gtaaaaatat ttttcatcat catctcagga ccacaagtat atataaaatc
     1861 aaatttttct ttatttatta tatactttat agcatcagta accttcccct tcattccaaa
     1921 agtgccgtcg tcagtggtta caattatttt gttgcttgtt tttgatacta gttgttttgc
     1981 caaattgtaa aaaaggactt cattttttgt ttttgcccca attatcaaag tatattttat
     2041 tttagaattg gttaaaaaat tagcaaatcg cattaacgga actagacccg ttccaccacc
     2101 tgccaacatt acgtttttgg cattattgtt tatactaaac gagtttccat acggacctct
     2161 tatccctatc acatcattca gtttcttatt aaataatgca gtagaaccta taccatgttt
     2221 tctaatggta actgctgcat aacctgattt ctttgagaac attacactca ttggcagttc
     2281 ttcgattcta ggaatccata ccatcaagaa ttgtccaggt ttagcattat acgaaagagg
     2341 gtctttgaat atcagggttt taatcgatgg tgtttcttca attacttgct ctattaccac
     2401 ggtacgaata ctatcaatat ctgtgtgcaa ttccaataat ctccttgata cttttgtagc
     2461 cttttttatc caaatatcca ctaattcctt taattatttt attaataaca cctaaaccat
     2521 gataaccaat aactgaacct aactctactg tcgtggcccc cgccagcatg tattctatta
     2581 catcttccca attcatgatg ccaccacagc caatcactgg aatacttact ttttttgaga
     2641 tctcataaac acatctgaca ccgataggct ttatagagct cccagaaagg cctccaattt
     2701 tattactgag gataggcata ccggtctcag tatttattgc cattgcccgt atggtattta
     2761 ttgcagtaat cgcgtctgcc ccagattctt cgattatatc tgcaagcttt actacgtcca
     2821 cattacctat tccaactttg ataattactg gttttttggt atttgcttta atagttttaa
     2881 taattttagt taccaaagta ggatcatccc caacttccat tcccattttg gctacgtgag
     2941 gacacgatag atttatttcg tatccaagaa tattgagttt atcgaatttt ttaatcaaat
     3001 ttgggaattc tattgcactt gaacccacca gacttacaat taatggaaca gtattatttg
     3061 agatttcttc tgaaaatgca tctgctcctg gatttgatag gccaatcgcg tttaaataac
     3121 tcttctggtt aattgaaact attgtagggc ctttatatcc ctccatagga tcaacactta
     3181 tagatttact aacgacagct cccaaacctg atctatataa tctattgaaa atttcttgag
     3241 agattcctaa aaaaccagat gctaatagca aaggatttct gaaatgcatt cctgcaattt
     3301 ctatggacaa atcattcgga tcggaactct ttttaagatt agtcagagct ggttgatatt
     3361 tcaatagtat tagattagaa tatttaaata tcttcttatt agttgttcgt tttcaaattt
     3421 tgtttaaaaa tcttaaaagt aagatggatt tactatttca tcatgtttat acattataaa
     3481 a
//
LOCUS       DATIAS010000660         3902 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1892815, whole genome shotgun sequence.
ACCESSION   DATIAS010000660 DATIAS010000000
VERSION     DATIAS010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3902
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892815"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VLA74_13360"
     CDS             complement(<1..200)
                     /locus_tag="VLA74_13360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51742.1"
                     /translation="MTSKKLSAYAYSKIRIERGRSNPPIVPSIPKEDAEKSGIQLRDV
                     IHILTDREKIVIQKTEVQKSNF"
     gene            complement(569..934)
                     /locus_tag="VLA74_13365"
     CDS             complement(569..934)
                     /locus_tag="VLA74_13365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51743.1"
                     /translation="MVENQCETNCASKDPMKELTNKCTEGSCGCETTSCNSSPCCDTD
                     PISAAKSLLQSSFYTALKEVHVEKLKKIIEKEWGTTIDKAVELTIKTVEKQWQTSLTK
                     STANKEFYNELEKIFTSGK"
     gene            1024..1479
                     /locus_tag="VLA74_13370"
     CDS             1024..1479
                     /locus_tag="VLA74_13370"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF51744.1"
                     /translation="MTDQKLSEQYGERENFNQFMIDDMNCKCCPVFNTLNIIGKKFTT
                     LLLRNMIFLKQKRFSEFLNSIEDINPKTLSIRLKEMEREGLIKREVFNETPVRIEYYL
                     TEKGKALQPILMQMALFSIKYCCDEVFDNPDLNKIKKINSKSLSKYMTT"
     gene            2073..3206
                     /locus_tag="VLA74_13375"
     CDS             2073..3206
                     /locus_tag="VLA74_13375"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HSF51745.1"
                     /translation="MQILFTGDVMLGRLVNEVLANSKFTYVWGDTIDIIKRADFSLIN
                     LECAISSRGKEWNKTFKVFHFRANPDAIKVLNSASIDYTSLANNHVLDYDFEALLDTI
                     NFLKENNISHSGAGVNLKEAMKAAFLEKKIKPRANNISSYYNEADYEQANDNNIKNTI
                     RIAVISLTDNEPEWEAKGDSAGINYIPISLDPEEYYHRLKNCIEEARKQSDLLIVSSH
                     VGPHFRETPSREYVNFAHKIIDFGADIYWGHSNHMPQGIEIYKPDDNRNNKIIIYDAG
                     DFIDDYAIDSYYRNDLSFIFILHFNLDKNYKFSNSSDKGNILLQNGIIELIPTKISNL
                     NVNRISADDNDADLIIKRMVKRCSNLGTKCFIDQKKKRILIFL"
     gene            complement(3467..3841)
                     /locus_tag="VLA74_13380"
     CDS             complement(3467..3841)
                     /locus_tag="VLA74_13380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51746.1"
                     /translation="MHIDYRKTTLAIIFSIIIIGLIAIPLGNPKFIYRAIALELSFVI
                     LSVFLWKGYTQALYACIPISLLVIIGNTLAPPHVNLILTFSKPLNAIVLIVGGYILQA
                     LLIFFSIKYLSEIRSKRISKQL"
BASE COUNT         1415 a          537 c          588 g         1362 t
ORIGIN      
        1 ctaaaattag atttctgaac ctcagttttt tgtataacta ttttttctct gtcagtaagg
       61 atgtgaatga catctcttaa ttggatgcct gatttttcag catcttcttt aggaatactt
      121 ggcactatag gaggattgct acggcctctt tcaattctta ttttactata agcgtaagca
      181 ctaagcttct ttgaagtcat gattatacat ttaatattaa attgcatgta taaatatatc
      241 atgtatcgac tatatatata tgtgtcttat ttaacgatac tattgagatt gatctggctt
      301 tataatacat ataaaacaaa tagtttctaa acaaatctta aagaaaacaa taaaaaatag
      361 aagaaaagga aacacatcat aaatcagggt attgagagaa aaaaagtttg tgaaatatta
      421 aattattttt atacaaattt gatagaaaat aaatatgaaa atcattctcc attcatttta
      481 cagtatacat agaaaaaaaa taaggatttt atttaattgc tgttcatcat ttgtatttta
      541 tttcccatat ctaggatgaa atactttttc acttgccgga tgtaaatatt ttctccaatt
      601 cattgtagaa ttccttattc gctgtcgact ttgttaaaga tgtttgccat tgtttttcta
      661 ctgtcttaat agttaactct actgccttat caatagtagt tccccattct ttttcaatta
      721 ttttttttag tttttctaca tgaacttctt tcaacgcagt ataaaatgaa ctttgcaata
      781 gtgattttgc tgcactaatt gggtctgtat cacaacaagg agagctatta cagcttgttg
      841 tttcacaacc gcatgatcct tctgtacatt tgtttgtcaa ttctttcatt ggatccttac
      901 ttgcacaatt tgtttcacat tgattttcaa ccatttttct attacctcgt gtaacttact
      961 atagaaaggt aagtatataa attagtaagt gataaattgg taagtggatg aaatattagt
     1021 aacttgacag accaaaaatt atctgaacaa tatggagaaa gagagaattt taatcagttt
     1081 atgatcgatg acatgaattg taaatgttgt ccagttttta atacgctcaa tatcatagga
     1141 aaaaaattca caacactgct attacgtaac atgatttttc taaaacaaaa aagattcagt
     1201 gaatttctta attccataga ggatataaat cccaaaacac tgtctatacg acttaaagaa
     1261 atggaaagag aagggctaat aaaaagagaa gtatttaatg aaactcccgt cagaatagaa
     1321 tactacttga ctgaaaaggg aaaagcatta caaccaatac tgatgcaaat ggcattattt
     1381 tccataaaat attgttgtga tgaagtattt gataatcccg accttaacaa gattaagaaa
     1441 ataaattcaa aatccctgag taaatatatg accacataaa catgtatatt cttaaatgtt
     1501 tagatctttt ttattaatca aattttcatg ttctgttaat atgactatct attgaaattt
     1561 gtcaaaagca gaacgttaac atgcagtgaa tgcaactata tctgtacttt gccttgttat
     1621 acgtaattta tataagtctc tgacaatttt aaggaataaa aattaaaatc tgcatttgtg
     1681 taaatttgaa tagaattcaa cgatttgatg tgtatcacaa aatataaaga aaaggagtat
     1741 ctgtatacat tatagatgaa gctatattca gattggtagt caacgtttct gttattgttt
     1801 cgtattgaac tggtacctca ttcttatgta ttgagaaatc acactttagc ggagagaaat
     1861 atgtttgatg attaccattt gttcattcat tggttgaaaa gtattgaaaa catacggtat
     1921 aaagatgcag gtagccagta tctgaagctt acaacgtact aggattgaaa cttgcaaatc
     1981 ttcctaattt tagcaaaatc tgatgcaaag agttgtccaa gatttcaaaa ataaaaccgt
     2041 atctttttta tttataattt tcagtacatg ttatgcaaat tctttttaca ggtgatgtta
     2101 tgctaggtag acttgtaaat gaagttcttg caaactctaa attcacctat gtatggggag
     2161 ataccataga tatcatcaaa agagcagatt tttctcttat aaatttagaa tgtgcgatat
     2221 cttcaagagg aaaagaatgg aataaaacat tcaaagtatt ccattttcgt gctaatcctg
     2281 atgccattaa agttttgaat tctgcctcta ttgattatac atctctagca aataatcatg
     2341 ttttagatta tgactttgaa gctttactag acaccattaa ttttctgaag gagaataata
     2401 tttctcattc tggcgcaggc gtaaatttaa aagaagctat gaaagccgct ttcttagaaa
     2461 aaaaaataaa accacgtgca aataatatta gttcttatta taacgaagcc gactatgaac
     2521 aagccaacga taataatatc aaaaatacta taagaattgc agtaatttct ttaacggata
     2581 atgagccaga atgggaagca aaaggtgact ctgctgggat aaattatatt ccaatatcat
     2641 tggatcccga agaatattat catagactta aaaattgtat tgaggaggcg agaaagcaat
     2701 ccgatttact tatagtctcg tctcatgttg gaccacattt ccgagaaaca ccttctaggg
     2761 aatacgtaaa ttttgcacat aaaataatag atttcggtgc tgacatatat tggggtcaca
     2821 gtaaccatat gccccaagga atagagatct ataaaccaga tgataatagg aataataaaa
     2881 taataatata tgatgctgga gattttatcg atgattatgc tatagattct tattacagaa
     2941 atgacttgtc atttattttt atattgcatt ttaatcttga taagaattat aaattttcaa
     3001 atagcagcga taaaggtaac atattgttac aaaatggtat aattgaactt attcctacga
     3061 agataagcaa cttaaatgtt aataggattt cagcagacga taacgatgca gatctaataa
     3121 taaagagaat ggtcaaaaga tgttctaatt tggggacaaa atgttttata gaccaaaaga
     3181 aaaaaagaat attaatattc ctttaatcga aacagaatat actatatact aggttattgc
     3241 tattttttgt ttgtttattt tttaattgtt ataaatatgt gtcgataaca ttggaatttt
     3301 cttctcttaa attcatgtaa tattttactg tcagattatt aactgggagc gatgttattt
     3361 gtaattactt attatgaaaa attcaaggaa tgaatatcaa tagatctttc agaactcata
     3421 tcttgatgtc ctaaatttat tcggaactat ttaaattaat aaaaggttac aattgttttg
     3481 atattctttt agaacgtatt tcagaaagat atttgatact aaaaaatatc aataaagcct
     3541 gtaaaatgta tccaccaact atcagtacta ttgcatttaa tggtttagaa aatgttaaaa
     3601 tcaaatttac atgtggaggt gcaagggtat taccaattat caccagcaat gatattggga
     3661 tacatgcata caatgcttgt gtatatcctt tccataaaaa aacagatagg ataacaaatg
     3721 atagttccaa cgcgattgcc ctataaatga actttggatt tcctagtgga atagcaatta
     3781 aaccaatgat aattatagaa aatatgatcg ctagtgttgt ttttctgtaa tcaatatgca
     3841 tatagattat aaaaagataa atcaataaac gcaaatttaa gtctaataac taattttctt
     3901 tt
//
LOCUS       DATIAS010000661         2664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_121090, whole genome shotgun sequence.
ACCESSION   DATIAS010000661 DATIAS010000000
VERSION     DATIAS010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121090"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            391..1050
                     /locus_tag="VLA74_13385"
     CDS             391..1050
                     /locus_tag="VLA74_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51747.1"
                     /translation="MMIKSLNFAIIITTITIIIGTTNDNSEVLAQNTTTNSSVSMTQS
                     TYNQTNYQQPQTFTHGIIVNLDGVEYYISGPADGINGTKDAPGHYWWQDAPRHLYGLH
                     YNIGPFGEEQWWSSDAKSNELLYVVDAIIAPWTNTTAHEFAKQGYVYYHELVRTDTGE
                     KHPELVAWFKHVAVLAAFILDKGPMPEDKHIVGAGIDYRFLGNNYYKPYNPNASQGYS
                     K"
     gene            1306..1500
                     /locus_tag="VLA74_13390"
     CDS             1306..1500
                     /locus_tag="VLA74_13390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51748.1"
                     /translation="MFRPKLTYDINYFNEYNKNRINRDDIETLHKCNDCGKNNKLYWS
                     EQQRSKKFLEILKIGINLMD"
     gene            1825..2598
                     /locus_tag="VLA74_13395"
     CDS             1825..2598
                     /locus_tag="VLA74_13395"
                     /inference="COORDINATES: protein motif:HMM:NF013003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSF51749.1"
                     /translation="MDKIITKLHKYYIFDITIAIVFLFIGGITVPPTFSEYFDNSITS
                     QKLAAEFLEKDDINLTKIDAERDDKLLKESVKFKLIDVSYKNLSGIYFKIFNSTLASS
                     YLENFQFSGNLSNTNISNSYFTVAADLNKKVNLTKANLTTANLYGTNLTDADLTGADL
                     TYADLSHTVLINANLTFTGLKRAILIGADLTNATLIGADLTNTILLDTNLTNADMNHA
                     KFDGTFFNCASLKTTTNITDLTIQNIIILDSNSNKITSC"
BASE COUNT         1007 a          368 c          356 g          933 t
ORIGIN      
        1 tttttaattt cattccatag atcatctgga atacgtataa ttgttctact aatatacttt
       61 ttacttttac tcaaatgtta aacatataag agaataaaaa caggcagcta tatttctatc
      121 tatttttggg ataggctcta agtggcagga ctcttttcac tttttcttat gtctattaat
      181 ttgtcttttt caagaaatgc acttattctc ttcaagttga tatcagagtt gactttacca
      241 ctactaggcc tcgttgctct atgatgggaa cgtatacctt tacatatcct ataactttat
      301 tattcattta gttagttatt aggaagtagc agtatttgta acttagcaaa cattttattt
      361 ataagaattg cttattctta tagagtatat atgatgatca aatcattaaa tttcgcaata
      421 ataataacga ctattacaat cataataggt acaacaaatg ataatagcga agtgttggct
      481 caaaatacaa ctacaaattc ttcagttagt atgactcaat ctacctataa tcaaactaac
      541 tatcaacaac cacaaacttt tactcatgga attatagtaa accttgatgg tgtagaatat
      601 tatattagtg gtccagcaga cggtatcaat ggtacaaaag atgcacctgg acactactgg
      661 tggcaagatg ccccacgtca tctttatgga ctccattaca atatcggtcc atttggagaa
      721 gaacagtggt ggtcatctga tgcaaaaagt aatgaattac tatatgtagt tgatgcaata
      781 attgcaccat ggacaaatac aacggcacat gaatttgcta aacagggata tgtttactat
      841 catgaattag taagaacaga cactggcgaa aaacatcctg aattagttgc ttggttcaag
      901 catgtagcag tacttgcagc atttatacta gataagggac ccatgccaga ggataagcat
      961 atagtcggtg ctggaattga ttataggttc ttaggcaaca actactataa accatataat
     1021 ccaaatgcaa gtcaaggtta ttctaaataa agagaaacaa aataagaaat taaactttct
     1081 attctattct attctatttt ttgatttcta ttcttatatt acagaattat aaattccctt
     1141 tttcattcaa ttttctttaa ttaatagttt aagatactat ttgagggaat aaaatctata
     1201 aagattctgt tacagatata caaaaacaat atgagatact gtcatattaa aaaaagatgg
     1261 aatatcaacc aatttgaatt agtactaatt ttcaaaaagt ttaaaatgtt tcgtcctaaa
     1321 ttaacatatg atattaatta ttttaacgaa tataataaaa atagaattaa tagagatgat
     1381 atagaaacat tacataaatg taatgattgt ggaaagaata ataaattata ttggtctgaa
     1441 cagcaaagat ctaaaaaatt tttagaaata ttgaaaattg gcataaatct aatggactaa
     1501 cttgttttaa tatttttaat ctatattaga ttctcaacta ctatatctaa aatccgatat
     1561 tttaaaattg ttcatatacc ttaataacta agattttctt aattcagtaa atctctactt
     1621 ttatgtataa ttttcgattt ttagaatgtt acattatatt tctttttttg agtaataata
     1681 agatttgtta cataagattt attgtaaaag tgcaaggcaa aagagaaaaa atataattca
     1741 tattaaaaaa atataactaa ccataaagag aagaataact atataaaata ataatgtaaa
     1801 gaaaaataca aaagtaataa aataatggat aaaataatta ctaaactaca caaatattat
     1861 atttttgata taacaatagc aattgttttc ttattcattg gtggtattac agtaccacca
     1921 acttttagcg aatattttga taatagtata acttctcaaa aattagcagc agaattttta
     1981 gagaaagatg atataaattt aactaagatt gatgctgaga gggatgataa gttattaaaa
     2041 gaaagcgtta aattcaaatt aattgatgtc tcatataaaa atctctctgg tatatatttt
     2101 aaaatattta attcaacttt agcgagttca tatttagaaa actttcaatt ttctggcaac
     2161 ttatcaaata caaatattag taattcatac tttacagttg ctgcagattt aaataagaag
     2221 gttaatctca ctaaagcaaa tctaacaact gcaaatttat atggcacaaa tctaacagat
     2281 gctgatctca ctggtgcaga tctaacatat gctgatctca gccatacagt tcttataaat
     2341 gcaaatctta cttttacagg tttgaaacgg gctatcctta taggtgcaga tcttacaaat
     2401 gctaccctta taggtgcaga tcttacaaat actattcttc tagatacaaa tcttacaaat
     2461 gctgatatga atcatgcaaa atttgatgga acattcttca attgtgcaag tctgaaaacg
     2521 acgactaata ttacagattt aacaattcaa aatatcataa tacttgattc aaattctaat
     2581 aagattacga gttgttagac taaacttatt ctatgaattg ttgttgtttt tttcatttaa
     2641 cttatctata ttaagtttct aatt
//
LOCUS       DATIAS010000662         5324 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1892895, whole genome shotgun sequence.
ACCESSION   DATIAS010000662 DATIAS010000000
VERSION     DATIAS010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5324
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892895"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VLA74_13400"
     CDS             <1..501
                     /locus_tag="VLA74_13400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSF51750.1"
                     /translation="DQIHTTIDGFGERTGIPSLAETSIALNLIYKSSNNFRLHMLKDL
                     SKTISQYTGLEIPESTPIVGDSAYKHKAGTHLAAILRNPSAYEIIEPKLVGNRRKIVF
                     GELAGKNGAAYLLSLLGLETSKHEAETLARGLKELRMGDVLELFLDERLERKILNEGS
                     PNVIKE"
     gene            508..675
                     /gene="lysW/argW"
                     /locus_tag="VLA74_13405"
     CDS             508..675
                     /gene="lysW/argW"
                     /locus_tag="VLA74_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019878 - lysine biosynthetic process via
                     aminoadipic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-aminoadipate/glutamate carrier protein
                     LysW/ArgW"
                     /protein_id="HSF51751.1"
                     /translation="MVKCKECDAEIRIPDDSIEGEIVACPDCGSSYELVKGADGFSIK
                     PSQVVGEDWGQ"
     gene            672..1532
                     /gene="lysX"
                     /locus_tag="VLA74_13410"
     CDS             672..1532
                     /gene="lysX"
                     /locus_tag="VLA74_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine biosynthesis protein LysX"
                     /protein_id="HSF51752.1"
                     /translation="MTERKNTTSLILLYDNIRWEEKAIYESARKRGIDITNVDCKDLI
                     LELDGPSYSNKIIIQRCVSYFKSLHSTAALEGLGANVINPLNTSIVCGNKLFTHMKLK
                     NAGIKTPKVITTFSYEAALSALDIFGYPTIIKPTIGSWGRLIALLKDKDAAKAVIEDR
                     QHMFPLYQIYYFEEFVDRPPRDIRAIVIGDTVVAAIYRYSENSEWKTNMALGGRAESC
                     PITKELEDICIKSTQAVDGKIVGVDLMESSRDGLLVHEVNNTTEFKNTVRVTGIPIQD
                     MIVDYSLQYN"
     gene            1547..2662
                     /locus_tag="VLA74_13415"
     CDS             1547..2662
                     /locus_tag="VLA74_13415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSF51753.1"
                     /translation="MVSPNYAVELLKRSIELYTPSRSESQLANMLKEKCIDDLGFEQA
                     QIDSVGNVIATKGTGYPRILLCGHMDTVPNKVPIRIEDGLLYGRGASDAKAPLIAMLL
                     AASEFPKQNGTIIFAGVVDEEGSATGSKQLVKNNIEVDYAIFGEPSGIENITISYKGR
                     LAIKLICDVLQSAHASAPWLAKNSIEESFEFWQAIKKEINKTNNSEKKSSSISCSLTE
                     ITGGSSHNVTPQKCKLTMDIRIPTTNTCQQVLDMIDKVISNISRQKGIKSNYIIEDFT
                     DPFEADHSSPLVRSLVLAILDVCKKRPNLLRKTGTGDMNIIGNALKIPVVTYGPGDPH
                     SSHSVDEHVDIQEYITGIEVFKRSLFHMSRLHNYQRK"
     gene            2717..3814
                     /gene="dph5"
                     /locus_tag="VLA74_13420"
     CDS             2717..3814
                     /gene="dph5"
                     /locus_tag="VLA74_13420"
                     /EC_number="2.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004164 - diphthine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthine synthase"
                     /protein_id="HSF51754.1"
                     /translation="MLYFVGIGIDGCNSISLNAIEIMKGCQIIYIERFTSYISKKEIE
                     KLAQLIDPEKKKKINLVQRWFIEDGKEILSKSKNAIVAIVSYGDPFMATTLNELLIRA
                     KRNLIETRLIHGSSGLFSFMGESGLHNYKFGRTTTIMSDPQSAISVYNIIYENLKAGN
                     HTLILTEYNNEDDKDFFFLNPQLALKMLVEVEKDLKYGIISEETFIIVGSRIGTDSQK
                     IQSGKIHSFENTDFGGGPHSIIIPGQLHFTEIDSITSLYQNFDNPSDNTKLFQHLAVS
                     MVNRYLPKAKEALKTMKSFLDKENSISTNNNKPDNKGMYNVLENAEYYLLDSERFLNQ
                     SKYELAVLSIGYAEGLIDSLRFQKNINPWLS"
     gene            3912..5282
                     /gene="gvpD"
                     /locus_tag="VLA74_13425"
     CDS             3912..5282
                     /gene="gvpD"
                     /locus_tag="VLA74_13425"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle protein GvpD P-loop
                     domain-containing protein"
                     /protein_id="HSF51755.1"
                     /translation="MSKNNQAFKIPDELLLFLKNETYSLLIKGEPGIGKTALCLAILR
                     ELNIKNNFFYISTRVSPNKLFYYFKWVNKYLKIKSSNLHNKFSKTEPTFGSFFEDARL
                     DEPESLFERITNQLMDVRAPLIIVDSWDGVASFMDRESRLNNERVLQTWLERAGGRLI
                     LVGEGTATSTLDYLVDGVVTLRNINYYGRDLREISLNKLRGINVIKNSYLFTLHEGMF
                     KTFESYRDPCSPSIQISEPDLDKSANLSTAMKFSSGYEIIDRDFNGGFLDKSVVLIEY
                     DPRIGINPAIIFLSQFISESMKKLYSIFLNYSLKNSYSLLLNQIIKNHNDDLIRYINF
                     FKKSRNNSENDQYVAKNMQSYDFIDEIEKFKLQSPVFSIIDIDRDQKIDPASLESLKN
                     HMNITFMIKTLDVSNKYSGLIFPDFHFQLVLINGVLCVNLLHPLSKMYVLEVNKEKNN
                     VKLIEI"
BASE COUNT         1921 a          774 c          953 g         1676 t
ORIGIN      
        1 gatcagattc acacaacaat agatggattt ggggaaagaa ccggaatacc ttctctggct
       61 gaaacttcta tagctttaaa tctcatttac aaatctagca ataattttag gttacatatg
      121 ttgaaagatt tatcaaaaac aatatctcaa tatacaggtc tcgagattcc agaatctaca
      181 ccgatcgtag gtgatagtgc ttataagcac aaagcgggaa cacatcttgc agccattctt
      241 cgaaatcctt ctgcttatga gataattgaa cccaaacttg tgggaaatag aagaaaaatc
      301 gtttttggcg agctagcagg taaaaacgga gcagcttacc ttttatcgtt attgggtctt
      361 gaaacaagca aacatgaggc tgaaactctt gcccgtggat taaaggaact tagaatgggt
      421 gacgttttag aattgtttct ggatgaacgt ctagaaagaa aaatacttaa tgaaggatcg
      481 ccaaatgtga taaaggagta aaagaatatg gtcaaatgta aagaatgtga tgcagaaata
      541 agaatccccg atgattcaat tgaaggtgaa atagttgcct gtccagattg tggttcaagc
      601 tatgaactag tcaagggagc agatggattc agtattaagc catctcaagt agttggcgag
      661 gattggggac agtgactgag agaaagaaca caacctccct cattcttctt tatgataata
      721 tacgctggga agaaaaagct atctacgagt ctgctagaaa aagaggaatt gacataacga
      781 atgttgattg taaagatcta attttggaac tagacggtcc tagctattct aataaaataa
      841 ttatacaaag atgtgttagt tatttcaaaa gtcttcattc tactgctgca ctggaaggtt
      901 tgggagctaa tgttattaat ccacttaata cttctattgt ttgtggtaat aaattattta
      961 cacatatgaa attgaaaaac gctggaataa aaactcccaa agtcataaca actttttcat
     1021 atgaagccgc actttctgct cttgatattt ttggatatcc gaccataatt aaacccacaa
     1081 ttggaagttg gggaagatta attgcgttac taaaagacaa agatgcagcg aaggctgtaa
     1141 ttgaagatag acaacatatg tttccacttt atcaaatata ttattttgag gaatttgttg
     1201 atagaccgcc tagggatata agagcaatag taataggcga tacagtagtg gctgctatat
     1261 atcgttattc ggaaaatagc gaatggaaaa ccaatatggc tttaggaggc agagcagaat
     1321 catgtccaat tacaaaagag ctcgaagata tttgtataaa atctacacaa gcagtagatg
     1381 gaaaaatagt tggagtagat cttatggaaa gttcacgaga tggtttattg gttcacgaag
     1441 ttaataatac aacagagttt aaaaatactg tcagagttac aggaatacca attcaagata
     1501 tgatagtaga ttactctttg caatacaact aatattatta ttaaaattgg tctcacctaa
     1561 ttatgctgtg gagctcttaa aaagatcaat agagctctat acaccctcaa gatctgaatc
     1621 tcaattagct aatatgctta aggaaaaatg tattgatgat ctggggtttg aacaggctca
     1681 gatagatagt gtaggaaatg ttatagctac aaagggaacg ggatatccta ggattcttct
     1741 ttgtggacat atggatacag ttcccaataa agtgcctatc agaatagaag atggtctatt
     1801 gtatggtcgt ggtgcctcag atgctaaagc tcctttaatc gccatgctct tagcagcttc
     1861 ggaatttcct aaacaaaacg gaactattat tttcgcaggt gtagtagatg aagaaggaag
     1921 cgctactggt agcaaacaac ttgttaaaaa taatatagag gttgattatg ctatttttgg
     1981 tgaaccaagt ggcatcgaga acataacgat atcgtataaa ggtaggttag caattaaact
     2041 aatttgcgac gtcctccaaa gtgctcatgc aagtgcccct tggctagcaa aaaattcgat
     2101 tgaagaatct tttgagtttt ggcaggccat aaaaaaggaa attaacaaaa caaacaatag
     2161 tgaaaaaaaa agtagttcaa taagttgcag tctgacggaa ataactggag ggtcgagtca
     2221 taatgttact cctcaaaaat gcaagcttac catggacata cgaattccta ctacaaatac
     2281 atgccaacaa gtattagaca tgatcgataa agtaatttct aatatttcta ggcaaaaagg
     2341 aataaaatcc aattatataa tcgaagattt tacagatcca tttgaagcag atcattcatc
     2401 tcctttggta aggtctctag ttcttgcaat actggatgtc tgtaaaaaac gaccgaattt
     2461 attacgaaaa actggtactg gtgacatgaa tattattggt aatgcgctta aaataccagt
     2521 agttacttat ggaccgggag atcctcattc ttctcatagt gtagacgagc atgttgatat
     2581 ccaagaatat attaccggaa tagaggtctt taaaagatcg ctttttcata tgtctaggtt
     2641 acacaattat caaagaaaat aatccaaact acgatacccc aaagataata agacaatctt
     2701 atctattttt aataacatgt tatactttgt tggaatagga atagacggtt gtaacagtat
     2761 aagtttaaac gctatagaaa ttatgaaagg ttgtcagata atttatattg aaagattcac
     2821 aagttacata agtaaaaaag aaatagaaaa actcgctcaa cttatagacc ccgagaagaa
     2881 aaaaaaaatt aatttagtgc aacgttggtt tattgaggat ggaaaagaga tactttccaa
     2941 atctaaaaat gcaattgttg caatagtaag ttatggtgac ccatttatgg ctacaacatt
     3001 gaatgaatta ttgatacgag ctaaaagaaa tttaattgaa acacgtctta ttcacggctc
     3061 ttctggactt ttttctttca tgggggaaag tggccttcat aactataaat tcggtcgtac
     3121 tactacaata atgtcagatc ctcaatctgc aataagtgtc tataatatta tttatgagaa
     3181 tctaaaagca ggaaatcata ccctgatatt aacggaatat aacaatgagg atgataaaga
     3241 ttttttcttt ctaaatcctc aattagctct taaaatgtta gtggaagttg aaaaagatct
     3301 aaaatatgga attatatcag aagaaacttt tattatagtt ggatcaagaa ttggaacgga
     3361 ttctcaaaaa attcaatcag gaaagattca ttcttttgag aatacggatt ttggtggagg
     3421 gcctcattct ataataattc ctggacaact tcattttact gaaattgatt ctataacatc
     3481 actttatcaa aattttgaca atccatctga taatacaaaa ctattccaac accttgccgt
     3541 atcaatggtt aacagatatc tgccaaaagc taaagaagcg ctaaaaacaa tgaagtcgtt
     3601 tctagataaa gaaaatagta tctctactaa taacaataaa cctgataata agggtatgta
     3661 caatgtacta gaaaacgctg aatattactt gcttgattca gagagatttc ttaatcaaag
     3721 taagtatgaa ttagccgtct taagcattgg ttatgcagaa ggattaatag attcattacg
     3781 atttcagaaa aatatcaatc catggttatc ttaattttat acctcatttt tttaaagatt
     3841 ttttttatat tctgatgata agaactatta ttataatagg agatgtttat ttctctgggt
     3901 gagtattatt attgagcaaa aataatcaag cttttaaaat accagatgaa ctattacttt
     3961 ttcttaaaaa tgaaacttat tcgttattaa ttaaaggtga acctggtatc ggtaaaacag
     4021 cattatgtct tgctatttta agggaattga atattaaaaa taatttcttt tacatatcta
     4081 ctagagtttc tccaaataaa ttattttatt actttaaatg ggtaaataaa taccttaaaa
     4141 tcaaatcttc caatctacat aataaatttt ctaaaactga acctacgttt ggatcattct
     4201 tcgaagatgc tcgactggat gaaccggaat ccctatttga acgaattaca aatcaactta
     4261 tggacgtacg agctccctta attattgtcg acagttggga tggtgtggca tcttttatgg
     4321 atagagaatc cagattaaac aacgaacgag tattacagac ttggttagaa agagcggggg
     4381 gtcgtctaat attagtcgga gaaggaacag ccacatccac attggattat ttagttgatg
     4441 gggtcgtgac attaaggaac ataaattatt acggacgcga tctcagagaa atatctttaa
     4501 ataagttaag aggaataaat gtaataaaaa attcctattt attcacgtta catgaaggta
     4561 tgtttaagac atttgaatct tatagagacc cctgttcacc gtctatccaa atttctgaac
     4621 ctgatttaga taaatccgct aatttgtcta ctgctatgaa atttagttct ggatatgaga
     4681 ttatagacag agattttaat ggtggttttt tggataagtc tgtagtcctg attgaatatg
     4741 atcctagaat tggaatcaat cccgctatta tttttttatc acaatttatt agtgaatcga
     4801 tgaaaaaatt atactccata tttttaaact atagtttgaa aaattcatat agtttattat
     4861 taaatcagat aattaaaaat cataatgatg atttgatcag atatattaat ttctttaaaa
     4921 aatctagaaa taattctgaa aatgatcaat atgttgcaaa aaatatgcag tcatatgatt
     4981 ttattgatga gatagagaaa tttaaattgc aatctcctgt atttagtatt atagatatag
     5041 acagggatca aaaaatagac cctgcatcat tagaaagtct aaagaatcat atgaatatca
     5101 catttatgat aaagacgttg gatgtttcaa ataaatattc tggtctaata tttcctgatt
     5161 tccattttca acttgtctta attaatggtg tactttgtgt taatttactt catcctttat
     5221 ctaaaatgta tgtgctggag gtaaacaaag aaaaaaataa tgttaagtta attgaaattt
     5281 gatcggagtg ctgtgataca gataagtctt tttattaatt ttaa
//
LOCUS       DATIAS010000663         4692 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1212382, whole genome shotgun sequence.
ACCESSION   DATIAS010000663 DATIAS010000000
VERSION     DATIAS010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4692
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212382"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VLA74_13430"
     CDS             <1..473
                     /locus_tag="VLA74_13430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51756.1"
                     /translation="QIDLYSILLSLFSGLISTGAMTFIEIPFWKRWGLTGILEWHENQ
                     VLTCKFFRLSPSSLHFWGIFLLHFINGSLGGLGLLFALILVPSLKEIPLIALGMFYGF
                     FLWILTLLPIHKPITGIDPLNHSLGKGPVIVSLIGHSIYGIILTTLFIATIHIE"
     gene            complement(835..1155)
                     /locus_tag="VLA74_13435"
     CDS             complement(835..1155)
                     /locus_tag="VLA74_13435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51757.1"
                     /translation="MKKLYTNNQWIKISFIINTNVLLIKLKDFEAPLLSELTEKINNW
                     IENRTTRFGEQFKYINIKYNYESHLHSNEEYLAGSESSYTAILIYENKNNNPDMDSDG
                     IIDG"
     gene            1233..1382
                     /locus_tag="VLA74_13440"
     CDS             1233..1382
                     /locus_tag="VLA74_13440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51758.1"
                     /translation="MNNNISNNNIHYDDLELEKKEKINETTRANFSNYVKFGKSDKKD
                     FKVGF"
     gene            1859..2653
                     /locus_tag="VLA74_13445"
     CDS             1859..2653
                     /locus_tag="VLA74_13445"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSF51759.1"
                     /translation="MEYYLGCSGWNYDEWKGRFYPEDLENKYWLSYYCQIFNFVEIES
                     TFYKIPSKLTAQTWEIETPDDFKLTVKFPKIITHSIRLSDLRQNIQKFYEVMRPLEKK
                     ILSFLIQLPPWLDMLDGINFLNSLDILLDKSFRYAIEVRHPSWFNDVSYNYLKRHDYC
                     LVWSQHDKLATPPIITSDFVYMRLIGNRSFDDKNIGKIVFDRTVEMEVWSKILLALQN
                     KVRNVNMAIVSANNYYSGFAPASAQSMAELMKLGQTITFPITNYKV"
     gene            complement(2800..3081)
                     /locus_tag="VLA74_13450"
     CDS             complement(2800..3081)
                     /locus_tag="VLA74_13450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51760.1"
                     /translation="MISYSVYKVLTNIFTRILFLDMKCLSCDNHFHPQMGFHFLGFNK
                     RQNSIYVYYQLCPSCNEPVIGTYETQKLEFMPPVSSDDINNKVSLLKKV"
     gene            3654..4514
                     /locus_tag="VLA74_13455"
     CDS             3654..4514
                     /locus_tag="VLA74_13455"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSF51761.1"
                     /translation="MNHEKKVAIITGSSTGIGYETSLSLARNGFKTYATMRNLEKAKS
                     LKEIKHNENLPIDIIELDVNSNESVNQAIKKIIDQDDRIDVLVNNAGYDVAGALEELT
                     LTEFKAQFETNFFGVIRVMKEVVPIMRSQNHGTIVNVSSIGGKVGVPLNSAYIATKFA
                     LEGLSDSIRFELQGFGINVILIEPGVVRSNFFENVKMATNASPHSPYYELTQKVFSGF
                     VPLMGDTSSSPKQVAETILEAVTTNNPQIRYVVGKDATSIIENRKKLSDRDFEKWMIE
                     SLVDQKGFVR"
BASE COUNT         1670 a          654 c          755 g         1613 t
ORIGIN      
        1 tgcaaataga tctatattca atcttattga gtttgttttc gggacttatt tcgaccggag
       61 ctatgacatt tatagaaata ccattttgga agagatgggg attaaccggt atcctagaat
      121 ggcatgaaaa tcaggtctta acatgcaaat tttttaggct ttcacctagc agtcttcatt
      181 tctggggtat atttcttttg cactttataa acgggagtct tggaggatta ggactattat
      241 ttgctttaat acttgtccct tctttaaaag aaattccttt aatagcattg gggatgttct
      301 acggtttttt tctatggatt cttactcttc ttccaattca taagccaatt acaggaatag
      361 atcctttgaa tcattcttta ggaaaagggc ctgttatagt aagtctgata ggccattcaa
      421 tttatggaat aatactgaca acattattta tcgcaactat tcatatagaa tgaaaaattg
      481 tatacaaaag atactatatc gttaaaactt caataatttt agtgtctgtt ctaatatctt
      541 caaatttatc gagatattta aaatcagtcg ttaactctaa agggttatag gtattgcaat
      601 acattctgtc aaataatatt gattctggat gaaccatatt tttcatccag ttatagattt
      661 tctcaattta tacaggggct gataaaaata ttttcataaa ttaaagaatt tttcatagta
      721 accttgatta ctttttataa aataaagact tttgctatta cagtttgttt cagttttttt
      781 cctatatttt cttttgatta ttttgaatac ctaataattg tttattttta gtgtttaacc
      841 atctatgatt ccgtcagagt ccatatcagg attattattt ttattttcgt aaattaatat
      901 tgctgtataa ctagattcag agcccgctaa gtattcttca ttagaatgta gatgggattc
      961 ataattgtat tttatgttga tatacttgaa ttgttctcca aaacgagttg tacgattttc
     1021 aatccaattg tttatcttct ctgttaattc agatagcaaa ggtgcttcaa aatccttcag
     1081 tttgatcaat agtacattag tattaataat aaaagatatt ttaatccatt gattatttgt
     1141 atataatttt ttcatgctga ggaaatcaga acaataataa taataaaata agacatgcca
     1201 tatgagataa tagttaacaa cgagaaaatt aagtgaacaa caatatcagt aataataaca
     1261 ttcactatga tgatctagaa ttagaaaaaa aagaaaaaat taatgagacg accagagcga
     1321 atttttctaa ttatgtgaag tttgggaaga gtgataagaa ggattttaaa gttggattct
     1381 gatatgaaac tcaagataac gctattctcg ggatgatatg ctactgatct aacaggatta
     1441 tagtatttct tatattggtt aattgataat gagaaatatc actagtcgta ttagtagagt
     1501 aatagaacta attattaatt tcataagtca aaaaaaatag aattactcta attatcactt
     1561 ttcacccgtc agtgtgcgaa taaataactt tcaattctat aaaattataa tgtttttttc
     1621 taattttttg tctttaaaac gagatttaca tttcaatcaa tagatttgga tggagggtta
     1681 ttaatgatat tgtgaatgtg aaatgaataa ttcaatcctc tttacgataa tgatttttgt
     1741 tccttcaaat gaagattaat ggaaagaaag aatagtcatg aaaattctga gcaaataaaa
     1801 cgtagtgtct atttgagtga atagaaaagt ttttgccaac ttgttctaaa ataatataat
     1861 ggaatattat ctgggctgtt ctggatggaa ttatgatgaa tggaagggac ggttctaccc
     1921 agaggatttg gaaaacaaat attggctttc atactattgc caaattttca atttcgttga
     1981 aatagagtct acattttaca aaattccgtc taagttgaca gcacagacat gggagattga
     2041 aacccccgat gacttcaagc ttactgttaa atttcccaaa ataattacac atagcattcg
     2101 tctttcagac ctcaggcaaa acatccaaaa attctatgaa gtaatgagac cattggaaaa
     2161 aaagattctt tcatttctaa tacagttacc cccatggcta gacatgctag acgggattaa
     2221 ttttttaaat tccctggata tcctattaga caaatccttt agatatgcta tagaagttag
     2281 acatccaagc tggtttaatg acgtttccta caactattta aaacgccacg attattgtct
     2341 ggtttggagt caacatgata aattggccac acctccaatc attacatcag attttgtata
     2401 tatgagattg ataggaaata gaagttttga tgacaagaat attggaaaaa tagtttttga
     2461 tagaacagta gaaatggagg tatggtcaaa gatattgctt gctcttcaaa ataaggtaag
     2521 aaacgtgaat atggctatag tatctgcaaa caattattat tcaggttttg ccccagcttc
     2581 tgcccaatca atggctgaat tgatgaaact aggacaaaca ataacctttc caattacaaa
     2641 ctataaggtt tgaactatga tttagaagat aagaaagata aaaatttttc tagatttgat
     2701 aacataaaac ataagaagac cagagactcg cctatcaaga attctattga ataatgttta
     2761 tccttaataa cttagtcaaa atgacctttt taacatcatc tataccttct ttagtaatga
     2821 cactttatta ttaatgtcat ctgatgaaac tggaggcata aattccaatt tctgagtttc
     2881 ataggttcct ataactggtt cattgcacga tggacatagc tgataataca cataaataga
     2941 gttttgtctt ttattgaacc ctaaaaaatg aaagcccatt tgtggatgaa aatgattgtc
     3001 acacgataaa catttcatat caagaaaaag tattcttgta aatatatttg ttagaacttt
     3061 gtaaacgcta tatgagatca tttgcacaat tagaaagatt aaagctaatc tcatactcca
     3121 ccacatttct ttatagattt ggctaattat gatagattat ttaaaaagcc gtcatcgttc
     3181 tgaccagtta atggatttga cttatctttg aacccctagt aaaaagttgt attcagctac
     3241 ctcaaagatt ataccatttt aaaagaaaat tgccctcttc tatttttaat tcaactaaaa
     3301 aactaatcta aaaagtgttt ttgggatttc atcgagctat ttctagatat gcaatcaatc
     3361 tagtacatat gtaacaatag aaattctgat aagatttgat ttaattttca aattgtaaat
     3421 tccttgattc tatattcgtt gaaacaaagc agtatttcga gactagtctc taaattccta
     3481 tattcatatt aaaatcatgg aaagttgttt cccagagata gggtcaaaaa ttaatattcc
     3541 aattttaatt ttagcatcgg ctcataaaaa taaaaaattt cgttgtcaat atcacaaata
     3601 aagacttgaa agatggtgta tcatttaagt aaaactaata ttctattttt gttatgaatc
     3661 atgaaaaaaa ggttgcaatt attacaggta gttcaaccgg tataggttat gaaacatctt
     3721 tgtctctggc aagaaatggt tttaagacct atgcaactat gagaaattta gagaaagcca
     3781 aaagtttaaa ggaaatcaaa cataacgaaa accttcccat tgatataatc gagttagacg
     3841 ttaatagtaa cgaatccgta aaccaagcaa taaaaaagat tatagatcaa gatgacagaa
     3901 tcgatgtatt agtgaacaat gcaggctatg atgtagcggg agctcttgaa gaacttacat
     3961 taacagaatt caaagcacag tttgaaacta acttttttgg ggttataagg gtcatgaagg
     4021 aagtggttcc tattatgcga agtcaaaatc atggaactat tgtaaatgtt agttcgatag
     4081 gaggaaaggt tggtgttccc cttaattctg catatattgc aactaaattt gcattggaag
     4141 gattgtcaga ttctataaga tttgaattgc aaggatttgg tataaatgtc attcttatag
     4201 aacctggtgt agtcagatca aattttttcg aaaatgttaa gatggcaaca aatgcttcac
     4261 cacattcacc gtattacgaa ttaactcaaa aggttttcag tggttttgta cctttgatgg
     4321 gagacacatc atcttctcca aaacaagttg ctgaaactat cttagaggca gttacaacaa
     4381 ataatccaca aattagatat gttgtaggaa aagacgctac ttccataatt gaaaacagga
     4441 aaaagttgtc tgatagagat tttgaaaaat ggatgataga gagtcttgtc gatcaaaaag
     4501 gatttgtaag atagttctca aaaatcattt taaatagtcg gttatattga ttacgataat
     4561 tttaatattg aaactcagtt tacctaaagt ataataataa aaataacaca tttaattgct
     4621 gagagataaa taagattaca atggaagaaa aatctttttt tcaggttgtg gaagaacgta
     4681 ggtctgtaag aa
//
LOCUS       DATIAS010000664         6643 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1212434, whole genome shotgun sequence.
ACCESSION   DATIAS010000664 DATIAS010000000
VERSION     DATIAS010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6643
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212434"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..334
                     /locus_tag="VLA74_13460"
     CDS             113..334
                     /locus_tag="VLA74_13460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51762.1"
                     /translation="MSVMDGFSLYDKLCEISKKVEDTPKEFRVCFMTSSVINYKVLAE
                     IHPELGEECYVSKEVPKDVFIKHINSLIP"
     gene            351..1145
                     /locus_tag="VLA74_13465"
     CDS             351..1145
                     /locus_tag="VLA74_13465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51763.1"
                     /translation="MIPKLVLIFLLVSFTFVFLNLFSFNLLEKAYGINETQNNNTINF
                     EKLVTEFLNWWVNVPVEEDPQQLENPCVIHNTDSVIFLHDPFEMGNIKNTCTIPQKSL
                     FFPFYIGWCDNGNQGYYGIKSYDKLLECTLDANRGIVTMNAYLDDKKIVDVLIDNIDV
                     NNLKVRYNNSLDSYYKEIGPTDFFDLTVTNKTQFTNYEKPEDFASSPAKYKAVAYCFC
                     GFIDKDKISPGNHQLSYYTKIEGSGGLDKTKGWDHESKITYILTVK"
     gene            complement(1178..2152)
                     /locus_tag="VLA74_13470"
     CDS             complement(1178..2152)
                     /locus_tag="VLA74_13470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51764.1"
                     /translation="MKLLRWFSLTPNYSILFYGIAISFFILNTIIGLVYVTQALTTHP
                     DIIKPASCRVLFGSLFHINPELSIYLSNLYDIISIISFIAIWVVTIFMLKQYSHNIGK
                     IKYWILVSIPLIVFMTKYEVLLYYFLYDQSLLNIFSSIRISPSINPIVHTVLDSNLQF
                     GGVFFAIVFLVIAKKIPNRHQIVNSLIISLIGMMLLFSSKDISTIILPSYPPLGIVGI
                     SFIGLASYLLLVGIYSSATIAARDITLRKYLFKKVENDTALLNNIAYAENEIEIQKNV
                     KSLITYSSHWQEEQNNQLEMNQQELKGLLNDVISEVKEKTNKNGKITK"
     gene            complement(3119..5017)
                     /locus_tag="VLA74_13475"
     CDS             complement(3119..5017)
                     /locus_tag="VLA74_13475"
                     /inference="COORDINATES: protein motif:HMM:NF013395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HSF51765.1"
                     /translation="MSKSSKKKISKKVSKGTSKDRSSKFMDDLKVFVRTQGSHYLKDP
                     NITSVGIGYKNKDGKPTKELAVQFTVGKKVQPEDLERLGTKCIPESFEINGVKVPTDV
                     IQRKYTTEYQLVSEAQTSDRKKRLNPVLPGSSVAHVKETAGTIGCIVYDRTNGTPYVL
                     SNWHVLNGPEGTIGDEIVQPGPYDDNRIHVNRLGKLVRSHVGHAGDCAVATIEDRGFS
                     TEIMELRVVVENLGEPGLGDKIVKSGRTTGITHGIVSRIHTIVKLDYGGSIGEREVGG
                     FEIGVDPDNIPDNGEVSMGGDSGSVWLFKSDNGQTTNIMAGLHFAGETSPNPDDEHAI
                     ACYPKSVFEKLEILLKPPTDLEKPPETGFNQNFLSSIVDLPKLSIKNQQNAFNLNGSE
                     VIDYTHFSLTLNKVRKFPFWVGWNIDGGNIKRLSRRGIRFVLDRRIPKEFQAGEELYA
                     GNRLDRGHIARRADLIWGGILEAKKANKDSFFFTNIAPQMDDFNQAARGGLWGRLEDA
                     VFEDTDVENLRVCVFGGPVFHADDREYREMKLPREFWKVIVFVDGQKLKAKGFLLTQN
                     LDELEVLELDPFKVYQIALTEIEDRCGIKFATSLRDADSVGERLSRRPEALSERKPLS
                     ALEDIDWS"
     gene            5502..5681
                     /locus_tag="VLA74_13480"
     CDS             5502..5681
                     /locus_tag="VLA74_13480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51766.1"
                     /translation="MVLVYVILPKHWNHLRTNKEVMFLFGIGFRDLDHVKSITNTKGR
                     VSAFIIDETVIYSDW"
     gene            5796..5990
                     /locus_tag="VLA74_13485"
     CDS             5796..5990
                     /locus_tag="VLA74_13485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51767.1"
                     /translation="MVDKYGRHTVYTDMVVLGTHRHGGTWYPQTCNFLYLKHRLHSPL
                     EKSLIDRKSNAILQRQHRIF"
     gene            complement(6461..>6643)
                     /locus_tag="VLA74_13490"
     CDS             complement(6461..>6643)
                     /locus_tag="VLA74_13490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51768.1"
                     /translation="NQYLKDRIESFDDYYPCMQKEKCNLLHVHNWIQFFVSMYNDTIA
                     NNNNYFGLKEVNIILN"
BASE COUNT         2276 a         1055 c          979 g         2333 t
ORIGIN      
        1 aaaaatggtt agatgaggaa gaaggattta attcaacatt aataagcgat cctcaaaccg
       61 cagaattaaa ttttaatcaa ctgattatga tctagttctt attggtttta aaatgtctgt
      121 aatggatgga tttagtcttt atgacaaatt atgtgaaata tcaaaaaaag tagaagacac
      181 accaaaggaa tttagagtat gttttatgac ttcatcagta ataaattaca aagtattagc
      241 agaaattcat cctgaattag gagaagaatg ttatgtttca aaagaagtcc caaaagatgt
      301 atttataaaa catattaatt ctttaatacc ttaatttatt ctatatgcta atgattccta
      361 aattagtatt aatttttttg ttagtttcat ttacttttgt tttcctaaat ttattctcat
      421 ttaatttact ggagaaggca tatggtatta atgaaacaca aaataataat actattaatt
      481 ttgaaaaact agttactgaa tttctaaatt ggtgggtaaa tgtgccggtt gaggaagatc
      541 ctcaacaatt agagaatccc tgtgtcattc ataatactga ttctgttatc ttcttacatg
      601 atccctttga gatggggaat attaagaata cctgtacaat tccacaaaaa tctctatttt
      661 tcccctttta cataggatgg tgtgataatg gaaatcaagg ttactatggt ataaaatcat
      721 atgataaatt gctagaatgt actttagatg ctaatcgtgg tattgttaca atgaatgctt
      781 atttagatga caaaaaaatt gtggatgtat tgattgataa tatagatgtt aataatctaa
      841 aagttcgtta taataactcc cttgatagtt attataagga aattggccca acagatttct
      901 ttgacttgac agtaactaat aaaactcaat ttacaaatta cgaaaagcca gaagattttg
      961 catcatcacc agcaaaatac aaagcagttg cttattgctt ctgtggtttt atagataaag
     1021 ataaaatctc tcctggaaat catcaattaa gttattatac aaagattgaa ggctctggag
     1081 gattagataa aacaaaagga tgggatcatg aatcaaaaat aacttatatc ttaacagtaa
     1141 aataatatat tttacaatat atatctataa acacctttta ttttgtgatt ttaccatttt
     1201 tatttgtctt ttctttgact tctgatatta catcatttag taatcctttt agttcttgtt
     1261 gattcatttc aagttgatta ttttgttctt cttgccagtg tgatgaataa gttattaaag
     1321 atttaacatt cttttgtatt tctatttcat tctcagcata tgcaatatta tttagcaatg
     1381 ctgtgtcgtt ttctaccttt ttaaaaagat attttcgaag agtaatatct cttgctgcaa
     1441 ttgttgcact actataaatt cctaccagta ataagtaaga tgctaaacct ataaacgaaa
     1501 ttcctactat acctaaagga ggataagaag gtaagattat agtacttata tctttagaac
     1561 taaaaagtaa catcattcca atcagtgaaa ttatcaatga atttactatt tgatgtctat
     1621 ttggaatctt tttggctatt actagaaaga ctattgcaaa aaatactcca ccaaattgta
     1681 agtttgaatc taaaacagta tgcactattg gattgattga tggacttatt cgaatagaag
     1741 aaaaaatatt caaaagggac tgatcataca aaaaataata taataagacc tcatatttag
     1801 tcataaaaac aattaatggt atactaacta aaatccagta tttgatttta ccaatattat
     1861 gagagtattg ttttaacatg aaaatagtta ctacccaaat tgctataaaa gagataattg
     1921 agattatatc atacaagtta cttaaataaa tagataattc agggtttata tgaaaaagag
     1981 atccaaataa tactcgacat gatgctggtt ttattatatc gggatgtgtt gttaatgcct
     2041 gtgttacata tactaatcca ataatagtat tgagtataaa aaaggaaata gcaataccat
     2101 aaaacaaaat agaataatta ggagtaagcg aaaaccatcg caatagtttc attgttaaga
     2161 tagataaaaa tcctattgat gataaaagtg aagtaaaaac aattatgaaa ataaagatat
     2221 tgtaatagtt agaatataaa gttatttgac tataaattgt taataaaatc attgatagta
     2281 aagactgaat aatcaagata gtaaaataat aatatttgtt caaatttgat acgatattcc
     2341 ttacaatatt taagagaaca atattgctta ttataaaaat aatagaatag atcaaatata
     2401 attcagtatt tgagatattg attatcctgc tgcttctagg agtacaaaat attgttaaag
     2461 aactatccat tataattatt atcaacatag atatgataag cgtgataatt gatttattgt
     2521 tggatagtaa tctaacttta ctcacatgct ataatacaat attttatgga tctttttaaa
     2581 aaactttcac attgatgtta ttaacattaa acatactatc gcatctagca attatttatg
     2641 tattgaatgc cagagtggga ttcgaatcca taaggtatgc ttggaggttc ttatttttat
     2701 aagtattgtt tatataattt tgacagaaat taaaaaattt aaaatttatt acatgactct
     2761 actgctttgt aagaccaata attaacatgg agagaataaa aatttgaacc ttatccatca
     2821 aatgtgggtt ctactatcaa atattaaatg atttggatta attaaaaaat attctttaac
     2881 tatagtttca caatcataaa aaaatattct ataatgacat gtaaagttta caatacatat
     2941 tgaagttcta tttattataa atttcaaaac atatatttga gaatataggt gttgatagct
     3001 atagattttt ttttcttatt gaaaaagtat atgtactcac attattgaag aattgatctt
     3061 tgcataaaat agtagatatt aaaaagaggg ggaagattaa tcatatcgtc tagtaatgtc
     3121 aagaccaatc tatatcttct agtgctgaaa gtggcttgcg ctcactaaga gcttcaggtc
     3181 tacgacttaa tcgttcgcct acagagtcgg catccctgag cgatgtcgca aattttattc
     3241 cacatctatc ctcaatctcg gttaaagcta tttggtatac tttgaatgga tcaagctcaa
     3301 gaacctccaa ctcatccaag ttctgtgtga gcaagaatcc tttggccttc aatttctgac
     3361 catcaacaaa aactatcact ttccagaatt cgcgcgggag tttcatctcc ctgtattctc
     3421 gatcatctgc atgaaaaact ggaccaccaa acacgcatac tctcaggttt tctacgtcag
     3481 tatcctcaaa aacagcatcc tctaaacgtc cccaaagacc gcctctcgcg gcttgattaa
     3541 agtcatccat ctggggtgca atgtttgtaa aaaagaacga gtctttgttg gctttttttg
     3601 cctctaatat ccctccccaa atcaaatctg cccgacgggc aatatgacca cgatcaagac
     3661 gattaccagc atataattct tcacccgctt ggaactcctt aggaatcctt cgatctagaa
     3721 cgaagcgtat gcccctacga cttaaccttt tgatattccc tccatcgata ttccaaccta
     3781 cccagaaggg gaactttcta actttattga gagtaaggga aaaatgtgtg taatcgatta
     3841 cctctgaacc attcaaatta aaagcatttt gctgattttt tattgacaac tttggaagat
     3901 ctacaatgct agatagaaaa ttctgattga acccagtttc aggaggcttt tccaagtccg
     3961 taggcggttt taataatatc tcgagtttct caaatacaga tttgggataa catgcaattg
     4021 cgtgctcatc atcaggattt ggagatgttt ctccagcaaa atgcagacct gccattatat
     4081 tagtcgtttg tccgttatct gatttaaaca gccagactga tcccgagtct cctcccatac
     4141 taacttctcc attatcagga atattgtctg ggtctacccc gatctcaaaa cctccaactt
     4201 ctctttcgcc aatagaccct ccatagtcaa gctttactat tgtatgtatt cgagaaacaa
     4261 taccatgtgt tatacctgtt gtgcgtccac ttttcacgat tttgtctccc aggccaggtt
     4321 caccaagatt ctcaactact actctcagtt ccattatctc agtactgaat ccacgatctt
     4381 ctattgtagc aacagcacaa tctcctgcgt gtccaacatg tgatcttaca agtttaccta
     4441 atcggttcac atgaatacgg ttgtcgtcat atggtccagg ctgcacgatc tcatcaccaa
     4501 ttgttccttc aggtccatta agaacgtgcc aattgctgag aacataaggt gttccattcg
     4561 ttctatcata aacaatacat cctattgtgc ctgctgtttc cttaacatgt gcgacactgc
     4621 tgcctggaag gacaggatta agccgttttt ttcgatcact tgtctgtgcc tcagatacca
     4681 attgatattc tgtagtgtat tttctttgaa tgacgtctgt aggtactttg acaccattga
     4741 tctcaaaaga ttctggaata cattttgtac cgaggcgttc tagatcctct ggttgtacct
     4801 tcttgcctac cgtgaattga actgctaatt ccttagttgg cttgccatcc ttattcttat
     4861 atccaatccc tacagatgta atattaggat ctttgagata atgtgaacct tgtgtccgaa
     4921 caaatacttt taaatcatcc ataaacttac tcgaacgatc ttttgatgtc ccttttgaca
     4981 ccttttttga tatctttttt ttggaactct tgctcataaa attttgaagc ccaacctagt
     5041 aaataagatt tttcatgatg tgattaatca agattaaatc gtatatcgta aataaccgcc
     5101 aattaaaaca attgccaaag ataaatttcc tacagaatta caattttttt ttatattcta
     5161 tttctttttc ttctatttct ttttttgcta tctgaaagaa aagaaatttg tctgtatttt
     5221 gtcaaaaggt caaatatcga ttcaggtaac aacatttcaa attcatattg tattacattt
     5281 gttagtaatt cacctttgaa atctcttctt gtagtaaata aaatattgct tccaaaagtg
     5341 acaattgtga atttagcagt gagatatcta ggacctgtta atttaacaaa aatgaattta
     5401 gctatgaatg tcctctattc taacatacat attggtcaaa tttgtcagaa acagaacatc
     5461 cactattatt gtagtaatgt attcattgta tttttacttt cttggtctta gtctacgtaa
     5521 tacttccaaa gcattggaac catttaagga ccaacaaaga agttatgttt ctgtttggaa
     5581 ttggattcag agatttggat catgtcaaat ctataacaaa cacaaaagga agagtttccg
     5641 cattcattat agatgaaact gttatttatt cagattggta gccaacactt ttggttatgg
     5701 atttgtattg aacctattca caaatctgcc cttggaatat acctttcatt tcagaagaaa
     5761 gacatatatt tgtagcagag aaattcatca gattcttggt tgataaatat ggtagacata
     5821 cagtttacac agacatggtg gtacttggta cccacagaca tggtggtact tggtacccac
     5881 agacatgcaa ttttctgtat ttaaaacatc gattgcattc tcctttagag aaaagtctga
     5941 ttgatagaaa gagtaatgca atacttcaaa gacagcacag aatcttttga tgattactat
     6001 ccacatgtat tgataagaaa aagaaaaaga attgtgatct agaacatgta tacaattgga
     6061 taagattatt tatttatcta tataacgcaa caatcagaaa tacaattcta ttcaaatttg
     6121 gaggtgaaat agtcttaact taacaggtcc gttattagca ataaagaaat tgattattaa
     6181 ttattttttt atcaaataag atatagaaac aacaacaaat atttaattaa caattatttt
     6241 cttgaagatt atctttggta gttaatgatt tgttatttgt ctataataca taataaatga
     6301 attaaaatta gtcaatatag atatatggat cattattatt taaccttcgc atagaattaa
     6361 aagcaaattg gttattgtta ttattctcat atcccttttg accattttga atattattta
     6421 aattgtcaga aatattttaa gaattgttga aaaggctctg ttaatttaag ataatattca
     6481 cctcctttaa tccaaaataa ttattattat ttgctattgt atcattatac atagatacaa
     6541 agaattgtat ccaattatgt acatgtaata gattacattt ctctttttgc atacacggat
     6601 aatagtcatc aaaactttct attctgtctt tcaaatactg gtt
//
LOCUS       DATIAS010000665         2086 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_121561, whole genome shotgun sequence.
ACCESSION   DATIAS010000665 DATIAS010000000
VERSION     DATIAS010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121561"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(309..698)
                     /locus_tag="VLA74_13495"
     CDS             complement(309..698)
                     /locus_tag="VLA74_13495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51769.1"
                     /translation="MNNNKEYNESKNDKWLRIAKYYDFIQAAELSNSFIVLMALDESN
                     QPQSSTQISEMISSKSNGKIFKVSGTIKDTLEKRLRKLGYVEGKDVPNIKGDRKPIRM
                     TLYSITPKGKRLLSGWSGFLSAIQNDK"
     gene            complement(775..1923)
                     /locus_tag="VLA74_13500"
     CDS             complement(775..1923)
                     /locus_tag="VLA74_13500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51770.1"
                     /translation="MVKPNYNNRMLSVKTESKSNKDIKKNWISVGASIKKNEVDLFNR
                     QLDNLQCKTLKDLCNLLIEGKLRRISDDEQVQVMNIQYQTTNLATAQVGQKFDFWKQV
                     DEQDLLNWLLGRYHPHTAKCYYSYYIRYVDTFFSPIVDVELFKLAKHKRSWILQSIKR
                     FGDYYAYRYGNKDVKNLIARIIERYDLNRDLDQKDRIYLVSPQFVEEKISKIMRIPGD
                     IGFTCRIGLFSGLRESEISYIKQKEICSQSFGCQCDKLHVASCNNGLSVIAINWTRGQ
                     KKALATILPTQYWEKLRNLPRFDYYDIQAAHKILKRETGIAYIVLRKIHYNVIRFKNA
                     FEVDEAEVLAGRFKSVSARHYVLNDPEKLSGKYISAWQNFGVTNLYLV"
BASE COUNT          693 a          331 c          235 g          827 t
ORIGIN      
        1 ataatttact aatattatat taaatttctt taattttgaa gaaagtcatt aatataacta
       61 atatcagatt cttactattc ttcgttatgt atattcagat agaaatgata tcccaaccat
      121 tcaacaattt tttatctttt gatgttattt ttcatgttct tttaaccgaa gctatttcct
      181 ctatatgtat tctatacatt agaaaatcct ctaattggat cctaattaag aatttttcca
      241 aatttttact aaaaattttt actattttta aaaattacca tatccttata tttactgaaa
      301 ttaattattc atttatcatt ttgaatagct gaaagaaaac ctgaccatcc tgagagtaat
      361 cgcttacctt ttggagttat agaatataag gtcattctaa ttggtttgcg atctcctttg
      421 atatttggaa catcctttcc ttcaacatat ccaagtttcc tcaatctttt ttcgagagta
      481 tctttaatag tgcctgagac tttgaaaatc tttccattag atttagaaga aatcatttca
      541 gaaatttgtg tagaactttg aggttgattt gattcgtcta atgccattag tactataaaa
      601 ctatttgata attcagctgc ttgtataaag tcataatatt ttgcaattcg taaccatttg
      661 tcatttttgc tttcattata ttctttgtta ttattcaaag tctaacgaaa taaaataaaa
      721 aagttgtata ctataacttt actatcgttt tttgaaggtt taattaataa aatattaaac
      781 taggtaaaga tttgtaactc caaaattttg ccatgctgaa atatactttc cagacagttt
      841 ttctggatca tttaaaacat aatgtcttgc actaacagat ttaaatcgtc cagctaaaac
      901 ttcagcttca tcaacctcaa aggcattctt aaatctaatt acattgtagt gaatttttct
      961 taaaacaata tatgcaatac ctgtttctct tttaagaatt ttatgggcag cttgaatatc
     1021 ataatagtca aaccttggca agtttcttag tttttcccaa tattgcgtag gcagtattgt
     1081 tgctaatgct tttttctgac ctcttgtcca atttattgca attacagaaa gaccattatt
     1141 acaggaagca acatgcaatt tatcgcattg acatccaaac gattgactac agatttcttt
     1201 ttgctttatg taagaaattt ctgattcacg taaaccagaa aataatccaa ttctacaagt
     1261 aaagccaata tcaccaggaa ttctcattat ctttgaaatt ttttcttcaa caaattgagg
     1321 acttacaagg tatatgcgat ccttttgatc taaatctcta ttaagatcat atctttcgat
     1381 aattcttgca attaaattct ttacatcttt atttccatat ctatatgcat aataatctcc
     1441 aaatcttttg attgattgaa gaatccatga acgtttatgt tttgctaatt taaataattc
     1501 tacgtctact attggactaa aaaaggtatc aacatatcta atataataac tataatagca
     1561 ttttgctgta tgtggatgat atcttcccaa taaccaatta agtaaatcct gttcatctac
     1621 ttgcttccaa aagtcaaact tttggcctac ttgtgctgtt gccaaatttg tagtttgata
     1681 ttgtatattc attacttgaa cttgctcatc atctgatatt cttcgaagtt taccttctat
     1741 taataaatta cataaatcct ttaatgtttt gcattgtaaa ttatcaagtt ggcgattaaa
     1801 aagatcgact tcatttttct ttatactggc accaacactt atccaatttt tctttatatc
     1861 tttattgctc tttgattcag ttttaaccga aagcattcta ttattataat ttggtttaac
     1921 caaataataa acattacgtt aaaccaatct aatattctta agatgatgct ttaccatatt
     1981 aagaaaaatt tttattaatt aagaaaaatc atcgcaattg cattagttcc atattattat
     2041 cttacgaaaa ttcttaagaa tagataaaat aaatgtacat taaaag
//
LOCUS       DATIAS010000666         2751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1755346, whole genome shotgun sequence.
ACCESSION   DATIAS010000666 DATIAS010000000
VERSION     DATIAS010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1755346"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1116)
                     /locus_tag="VLA74_13505"
     CDS             complement(<1..1116)
                     /locus_tag="VLA74_13505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit B''"
                     /protein_id="HSF51771.1"
                     /translation="MVNNFVDIWPIINDILRREGIARQHLNSYNEFMESGLQSIIDEV
                     NEVEIETAEFPYKLKLGKIKLQRPRIMELDGSITHVAPVEARLRNLTYASPIMLECSI
                     VEDGRIIESRFIHIGDMPVMVKSNVCILHNLPESKLIELGEDPRDPGGYFVINGSERV
                     IVGLEDLSYNKIIVDAEETAGTLTYKAKVYSSIVGYRAKLELIMKPDGSIVAKIPGSP
                     VDIPLITLIRALGLESDKDIANAISFNEKVQDELEPSFEKVGEIISSRDAIVYISKRI
                     APGMLEEFQIKRAETLLDWGLLPHLGKNPENRGEKALFLGEAANKLVELKLGWVDNDD
                     KDHYGNKVIKFAGQMLADLFRTAFRNLIRDMKYQLERS"
     gene            complement(1135..1386)
                     /locus_tag="VLA74_13510"
     CDS             complement(1135..1386)
                     /locus_tag="VLA74_13510"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit H"
                     /protein_id="HSF51772.1"
                     /translation="MSVDKKIVKVKNHIYQPKHEILSKDEAENILKKFNVRTNQLPYI
                     MSNDKGLEDLDIRPGDIIKITRKSPTAGESVYYRYVVQG"
     gene            complement(1583..1681)
                     /locus_tag="VLA74_13515"
     tRNA            complement(join(1583..1617,1643..1681))
                     /locus_tag="VLA74_13515"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1644..1646),aa:His,seq:gtg)
     gene            complement(1739..2539)
                     /locus_tag="VLA74_13520"
     CDS             complement(1739..2539)
                     /locus_tag="VLA74_13520"
                     /inference="COORDINATES: protein motif:HMM:NF013909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HSF51773.1"
                     /translation="MKIGLDLAGWKNIPFDSAIHVKGNNIKKVFVSIDVNPADIYLAK
                     NLGCDCVLTHHPLGKSLLSFHKVFDRHIDYMVENGVKKNLAISLVKDLKDKVSLKSHS
                     LIYNDVISTSQLLHMPLLNIHQPLDEYMRKIILNKLYNSELESISDLIEAIEEIPEFK
                     KALTRVIVCNGKSANQLGKWVLILAAGSNGGYDIARAYYENNISTVIYLHIDYNELLK
                     LKKDKRCKNLIILGHLAGDSIGMNGICKELEKREIVVVKRGIINYSNF"
BASE COUNT          922 a          473 c          338 g         1018 t
ORIGIN      
        1 tgatcgttca agttgatact tcatatccct tattaaattt ctaaatgcag tcctaaaaag
       61 atcagcaagc atttgacctg caaattttat aactttattt ccataatgat ctttatcatc
      121 attatctacc catcctaact taagttctac taacttgttt gcagcttctc caagaaataa
      181 agctttttca ccacgatttt caggattttt tcctaaatga ggtaacaatc cccaatctaa
      241 caatgtttca gcacgcttta tttgaaattc ttcgagcata cctggagcaa ttcttttact
      301 gatatataca atggcatctc tacttgaaat aatttctcct actttttcaa atgaaggttc
      361 taattcatct tgtacctttt cattaaaaga gatagcattg gctatatctt tatcagattc
      421 tagtcctaaa gcacgaatca atgttattag aggaatatca acgggagaac caggtatctt
      481 tgctactata gaaccatcag gtttcataat aagttctaat tttgctcgat aacctacgat
      541 agaagaataa acttttgctt tataggtaag tgttccagca gtttcttctg catcaacaat
      601 aattttatta taggacaagt cttctaatcc tactattact ctttctgatc catttataac
      661 gaaatagcca ccaggatctc tgggatcttc acctaattcg attaacttag attctggtag
      721 attatgaaga atacatacat tagattttac cattacaggc atatcaccaa tatgaatgaa
      781 tcgtgattca attattcttc catcttcaac aatgctacat tcaagcataa taggagaggc
      841 ataagtaaga tttcttagtc tagcctcaac aggggcaacg tgtgtaatag atccatccaa
      901 ctccataatt cttgggcgtt gaagttttat ttttcctaat ttcaacttgt atggaaattc
      961 agcagtttct atttctactt cgtttacttc gtctattata ctttgtaagc cagattccat
     1021 aaattcattg taagaattta aatgctgtcg tgcaatacct tctcttctta aaatatcatt
     1081 aataattggc caaatatcga caaaattatt taccaaataa tctatttctc cttcttatcc
     1141 ttgtacaaca tatctgtaat atacactttc acctgcagtt ggactctttc tagtaatttt
     1201 aataatatct cctggtctaa tatccagatc ttctaatcct ttatcatttg acataatata
     1261 cgggagttga ttagttctta cattgaattt tttaaggata ttttcagctt catctttaga
     1321 aagaatttca tgtttaggtt gatagatatg attttttact ttgacaattt ttttatctac
     1381 tgacaaatta acagcccccc cttcttatat ttatcattcg ataaataaat tttgataaaa
     1441 acagcttttc gcaatacgaa atcagtaaat tgcttagaat aggagatata tgtagtttct
     1501 tacaatcata attatagaca gatattaaaa tatcagttat gtatattaaa taatttttga
     1561 aaatattagt tttgtatcat taggccttcg gagggatttg aaccctcctc aagcggtttc
     1621 caccatttta caaaataaaa gaccacagcc gcctatacta accaggctat actacgaagg
     1681 ccactaggtt ttatgaaaat gtgcattatt tattctttag agaattgaaa aacaaaaatt
     1741 aaaaattact ataattgatt atacctcttt taaccactac tatttctctt ttttctagtt
     1801 ctttacaaat tccattcatt cctattgagt ctccagcaag atgtccaaga ataataagat
     1861 ttttacatct tttatctttt tttaatttta aaagttcatt ataatcaata tgaaggtaga
     1921 tcactgtaga gatattattt tcataataag cgcgtgcaat atcatatcct ccattagatc
     1981 cagctgcaag gataagaacc cactttccca attggttggc ggattttcca ttgcaaacta
     2041 taactcttgt taaagctttt ttaaattccg gtatttcttc tattgcttct attaaatcag
     2101 agatagattc cagttccgaa ttataaagtt tatttaaaat aatctttctc atatattcat
     2161 cgagtggctg atggatattt aataaaggca tatggaggag ttgcgaggtg ctaattacat
     2221 cattataaat taaagaatga gattttaaag aaactttatc ttttaaatct ttaactaatg
     2281 aaattgctag attttttttg acgccattct ctaccatata atctatgtgt ctatcaaaaa
     2341 ccttatgaaa tgataacaat gactttccta gcggatgatg agttaagaca caatcacaac
     2401 cgagattttt ggcaagataa atatcagctg gatttacatc aatagaaaca aaaacctttt
     2461 taatattatt ccctttcaca tgaatagcac tatcaaatgg tatatttttc catccggcta
     2521 aatctaaacc aattttcatt attttacttg tatctaatcc tttcaaaata ttctaaaata
     2581 ataataataa taatgtagaa tattactttt aacattttaa attatttgcc tattactaat
     2641 aatccataaa cttaattaga gattagaaaa tctcgattta ttcatggtaa aaaaataata
     2701 ataataaaaa ctcaataaaa aattgaacta ttttgtttaa aaaacttatt a
//
LOCUS       DATIAS010000667         4977 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1893546, whole genome shotgun sequence.
ACCESSION   DATIAS010000667 DATIAS010000000
VERSION     DATIAS010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4977
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893546"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..999)
                     /locus_tag="VLA74_13525"
     CDS             complement(169..999)
                     /locus_tag="VLA74_13525"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HSF51774.1"
                     /translation="MANGTRYKISTIIPARNEEKFIGETLSSLLKQDIIENRIIVVND
                     GSEDNTKKIVSSFKQVEIVDLKNRGFNAQGTPILAKVINTGLDRLRGDTSEYVMILGA
                     DHILPPNYISLILKYMDKDNEIAICSGQIRGENSVVPRGSGRVVRLDFWSKIGLQYPT
                     NYGFETYLLIKAQQLGYKIQILNNLISCTNRPTRTSYKKENYISYGKSLKALGYSTLY
                     SFARIGLISLKNPKGAFYMVQGYGSKDLNLYEDDFREFLKTIQHKRIKKYLKLMIRNN
                     "
     gene            complement(1294..1482)
                     /locus_tag="VLA74_13530"
     CDS             complement(1294..1482)
                     /locus_tag="VLA74_13530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51775.1"
                     /translation="MESNFILTKEKSNLEMILTYIRLDSFSVGSLQFNIVEECWRQGK
                     CRTPSCYKLIIVNMEIAI"
     gene            complement(2314..3345)
                     /locus_tag="VLA74_13535"
     CDS             complement(2314..3345)
                     /locus_tag="VLA74_13535"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSF51776.1"
                     /translation="MKIAIAGAGVAGSYLGCSLQKKGHDVTIFESSKKENHWAVCAWG
                     ASKNVLGIFSEKVGLKFDDYVFHIGKKLRMDLPNNKTEFLELDGLVTYNKQKWEQDIL
                     KSVNVIYDHKCMLSSFPLSSYDYVLDCTGIHRSLLPKSEEDFIIPAYEYLVENIESDD
                     EFYVIGYKGARGYFWYFPLEKGKGFVGAGDIDRKYYGVKEFFQRNPSARILKKIGRPI
                     RLSPPKRMEPFFQNNVIGIGESIGCVFPMLGEGIIPSLFCCEIFLNVFNNDPVKFNYN
                     SYRDLVLKKFDYYDSVYRIVRLKMDNKLSTIKHFHLMMKMYKHMKKDEKRFGFEINLD
                     KMNKLVNAL"
     gene            3697..4527
                     /locus_tag="VLA74_13540"
     CDS             3697..4527
                     /locus_tag="VLA74_13540"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HSF51777.1"
                     /translation="MNRTLMAYMLAAIVSFSAVAGITIQPIPLSAQTQSVTPQNAPLA
                     TSPSCGQVVTTNVVLTANLICAETDGIIVGADSIKIDLNGHTITGPDVTADDATTPAV
                     KDSSKVGIMVPNHNNVQIVDGTIEGFQAGVLCTGCQNLEISGVTSKDNQIGIFSTGAS
                     VMKVKLSTIMNNQIGIAAHSTQQMEDANNIVFNNDLAGITLVNSDNAHISLNSITESQ
                     NGIYVDNQSNDNFVFFNNVLMNTIDINNANGLPVNTNNNQYDQNNCMTSNPSGICIGK
                     "
     gene            complement(4728..4889)
                     /locus_tag="VLA74_13545"
     CDS             complement(4728..4889)
                     /locus_tag="VLA74_13545"
                     /inference="COORDINATES: protein motif:HMM:NF016057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-protein complex protein Nop10"
                     /protein_id="HSF51778.1"
                     /translation="MKHILRKCIACNRYSLKIQCPLCSNPTIDPNPAKFSPDDKYLKY
                     RVSAYHSEN"
BASE COUNT         1722 a          829 c          640 g         1786 t
ORIGIN      
        1 cctgtccttt ttgatattga aacattatga tctaatcttc tttggaattt taataatata
       61 caagctactc cagcttgatc ccacatatgt aatatattca tacgtaaata cctaaaatgt
      121 taaaaaatat taaatatatc catgattgaa tattgaaaat tgatttattc aattatttct
      181 tatcattagt tttaggtatt tctttattct tttatgttgt attgtcttta gaaattccct
      241 aaaatcatct tcatacaagt ttaaatcttt gcttccataa ccttgaacca tatagaaggc
      301 acccttggga ttttttaaag atatcaaacc tatcctagca aatgaatata atgtgctata
      361 tcctaaggct ttaagtgatt ttccataaga aatataattt tcttttttat aagatgttct
      421 agttggtcta ttagtacagc ttattaaatt atttaatatt tgaatcttgt accctagttg
      481 ttgagctttt attaacaaat aagtttcaaa accataattg gtcggatatt gtaatcctat
      541 tttactccag aaatcaagac gtactactct tcccgacccc cgtggaacaa cactattttc
      601 tcctctaatt tgtccagagc aaatagctat ttcattatct ttatccatgt atttcaggat
      661 tagagatata taattgggag gcaaaatatg gtctgctccc aaaatcataa catattcact
      721 tgtgtcgcct cgcaatctat ctaatccagt attaattact tttgcaagaa ttggtgttcc
      781 ctgtgcgtta aatcctctgt ttttaagatc cacaatttca acttgcttga aacttgaaac
      841 aatttttttg gtgttatctt cagaaccatc attaactact atgattctat tttctattat
      901 atcctgttta agtaaagatg aaagtgtctc accaatgaat ttttcttcat ttctagcagg
      961 aattatggtt gaaattttat atctggttcc atttgccaat agttacatac aatactctaa
     1021 gaaagcatta aaaaattttt tgttttcaaa aaataaaata caaatttatt tattcctaat
     1081 aaattataat aatgtttatt tataatacca attatttgaa catattgaaa aaaataaaat
     1141 ctagtcttac tttatagtgg tcccataata actttatttt taaactatca tactttttta
     1201 acaagacgta cctatagtag acgcaataaa ttcgctaacc catagtcgtg tttacagact
     1261 ttattatatc cagctccaat cttgtattaa cagctaaatg gcaatttcca tattaactat
     1321 aataagttta taacaagaag gtgttctgca ttttccctgt ctccaacatt cttctactat
     1381 attaaactgc agcgagccta ctgaaaagga atccagtcta atgtaagtta atatcatttc
     1441 taaattgctt ttttctttgg tcaaaataaa attgctttcc atctttattg taccttataa
     1501 aaggtacaga agatactgat cactgagtaa gtcgatctgt ggcatctttg catacatttg
     1561 cgagcgcttc aaatgacaaa tcaatattgt cattaagtgt actttctgga atcagtactt
     1621 gtgtttttgt ccatagatta acatctttat ctattagtcc ccagtctcat tctgcgtaat
     1681 ggttcaaaca aatttgcaga attaataaac ttatcacatt actttcaaat tcatctctat
     1741 taggtgtctt taaatcaaaa gataatattt ataattttat atcctgatct aaaaatagga
     1801 atgagtttct tttggctatc ctgtatagat taaacagcaa ttctttactc ctgtactgtt
     1861 tgaatataat gtcatctgcg caacataaga catttctgaa tataatcaaa taccttgtat
     1921 ttgtatctaa aattatgatt ggttttttgt tgtagattat gacaatatcc agtcttaatt
     1981 ataatttgtt actatttatg tctacagatt cgactttctg ttcttcagcg tttagttttt
     2041 cagtttttat tctcttttga aagctgcgta caataaattt ttcaaatatt gtattagtat
     2101 ctacaagaga tgatattgct gcctttttac ctaatgtttc ttcttcaata gaaatatttt
     2161 atagagggtt tcaatttttt ggaaattgta tcttttacaa ttttcgaaat attgaccaat
     2221 atattagtaa tcaatttaat ataaaactct aaacctagta ataaaaagta tatttattca
     2281 aagataattt aagcaactct aaattgcata cacctaaagg gcattgacta gtttattcat
     2341 tttatcaaga tttatctcga atccaaatct tttttcatcc tttttcatat gtttatacat
     2401 tttcatcatt aaatgaaaat gttttattgt acttaattta ttatccattt ttagtctgac
     2461 aatcctgtat acgctatcat agtagtcaaa tttttttaag accagatccc tataggaatt
     2521 ataattgaat ttaactgggt cgttattaaa aacattaaga aatatttcgc aacaaaacaa
     2581 cgatggaata atcccttcgc ccaacattgg aaaaacacat ccaattgatt cacctattcc
     2641 aatcacattg ttttgaaaaa aaggttccat tcgctttggt ggagacaaac gaattggtct
     2701 tcctatcttt ttcaatattc ttgcggaagg gttacgttga aaaaattcct ttactccata
     2761 atattttcta tcaatatctc cagccccaac aaaaccttta cccttctcta aaggaaaata
     2821 ccaaaagtaa cctctagcgc ccttgtaacc tataacatag aactcgtcat cgctctcgat
     2881 attttctact agatattcat atgcaggaat aataaagtct tcttcagatt ttggcaacaa
     2941 ggatcgatgt attcctgtac agtctagaac ataatcataa cttgataaag gaaatgatga
     3001 tagcatacat ttatgatcgt aaattacatt cacgcttttt aaaatatctt gttcccattt
     3061 ttgtttattg taagtaacaa gtccatcaag ttctaaaaat tctgttttgt tattaggcaa
     3121 atccatacgt aatttttttc ctatatgaaa aacatagtcg tcaaatttca acccaacctt
     3181 ctctgaaaaa attccgagaa cgttttttga tgccccccaa gcacatactg cccaatgatt
     3241 ttcttttttt gatgattcga aaatagtaac atcatgtcct tttttctgca atgagcaccc
     3301 caaatagctt ccagctacac ctgcaccagc aatggctatt ttcatatgat attgatatct
     3361 ttattttact tttataattc tttgaattgg attaagttct aaataggaaa taaaaatatt
     3421 cagattctga cctagaagat aattatctaa gatataaaaa agaattgact ttacaatctt
     3481 taaaggtttt ttattaaggt ttactaaaaa aataatggat tatgatatta ttttaaaatg
     3541 taaaatatat cacatatata tcatatctaa atgtaatttt gttatataat aagtagcaat
     3601 tgtactaata aatagttaca ttaaatatcg taattactta gttataataa aaataataga
     3661 ttaacataaa tatctcaata cccaaccatc tactaaatga acagaacact aatggcatat
     3721 atgttggcag cgatagtctc tttttctgca gtagcaggaa taacaattca gccaatacct
     3781 ttgagtgctc agacccaatc agttacccca caaaatgcac ctttagcaac tagtccttcc
     3841 tgtggtcagg tagttacaac aaatgtagtt ttaacagcaa acctgatttg tgctgaaacc
     3901 gatggtatca tagtaggagc tgactctatt aaaatagacc ttaatggaca taccattaca
     3961 ggaccagacg taacagcaga cgacgcaaca acaccagcag taaaggattc tagtaaagtc
     4021 ggtattatgg ttcctaatca caacaatgtg cagattgtag atggtacaat cgaaggattc
     4081 caagcaggtg tgttatgtac cggatgtcag aatctcgaaa tatctggagt aacttcaaag
     4141 gacaatcaaa taggaatatt cagtactggt gcctcagtaa tgaaagtcaa actttcaaca
     4201 ataatgaata accaaatagg tattgcagca cactctacgc aacaaatgga agatgctaac
     4261 aatatcgtgt tcaacaatga tttagcagga ataacattag tgaactcaga taatgcgcac
     4321 atatcattga attctatcac ggaatcacaa aatggaatct acgtagataa tcaaagtaac
     4381 gataacttcg tattctttaa caacgtccta atgaatacca tcgatataaa caatgctaat
     4441 ggcttaccag tcaacactaa taacaaccaa tacgaccaaa acaactgtat gacatctaac
     4501 ccaagtggta tatgcatcgg aaagtaaaat aaaatacatc caatcctttt ttttgaatta
     4561 gttataaaaa ttaaaaagtt agaatttaca gtaaatttac aaacaaacct accaaacaaa
     4621 cattaaaaat aaatcagaaa atatttatcc tttatcactt ttaataattt gttaagaaaa
     4681 tattaatagt ttatttaaaa aataagaaaa tcaaggttta gatataatca attttctgaa
     4741 tgataagctg aaactctata ttttaaatat ttatcatcag gagagaactt tgctggattt
     4801 ggatcaattg taggatttga gcataaagga cattgaattt ttagagaata acgattacac
     4861 gctatacatt ttctaagaat atgtttcatc ttaatggatt agttgttgtt gagttttttt
     4921 agactcttgt ctagtaaaat taaagtgacc atcatcactt tccacagctg attttaa
//
LOCUS       DATIAS010000668         3403 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1213058, whole genome shotgun sequence.
ACCESSION   DATIAS010000668 DATIAS010000000
VERSION     DATIAS010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1213058"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..772)
                     /locus_tag="VLA74_13550"
     CDS             complement(122..772)
                     /locus_tag="VLA74_13550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51779.1"
                     /translation="MYSMSLEEKIFDKIFSSGEEGVKKIALKKEYPGTDFDKKIEEWL
                     KTGEVVIAKKANTYYYWHKDNYFQYLINSDAKFKYIYELLKDLQDSFHGLSSSVNKHV
                     EKLDGRLILLMDSLLTNSNQRYEESVLKPEKTIDLNTFKLDFDLSISKNAGSIGWVAL
                     SIVRNDLCLKHELTEKQFYYYTKELIDQFKNNYELSSGGEEGIIIRGLLHGFVRCL"
     gene            1397..1759
                     /locus_tag="VLA74_13555"
     CDS             1397..1759
                     /locus_tag="VLA74_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HSF51780.1"
                     /translation="MNNDLTNNEDGCISFEEFLNVDLRVGKIKKVETVPRMDKIYKAE
                     IDIGTENRDIVIGVAQHYKPEQLEGKIVVVCTNLRPKKIGQIFFRGMVLAAECDKEKP
                     VLITIDSTENCSLGSKIH"
     gene            complement(1765..2481)
                     /locus_tag="VLA74_13560"
     CDS             complement(1765..2481)
                     /locus_tag="VLA74_13560"
                     /inference="COORDINATES: protein motif:HMM:NF021287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HSF51781.1"
                     /translation="MKLEILEHIHLNDFMVISSLPDMGKVGGIVSSFLSKKLDSKNIA
                     NIEAIEKPWVSHFNGIVKPILDFYKIYFSEKYNIIIFTGDSQPQDSNELYSLCNIFLD
                     YILSIGKIKCLYSAGGYLKQQVTGAPKVCGVTNNPELKPRLFNSGIDLVGNEIGNITW
                     FNGLILGLAWQRGIDAIGLFGEISKTDIKQPLAAKSIINAFSKLEEIRIDTKDLDKEY
                     EDLMEDVYNKKETNNHNNNV"
     gene            complement(2485..>3403)
                     /locus_tag="VLA74_13565"
     CDS             complement(2485..>3403)
                     /locus_tag="VLA74_13565"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSF51782.1"
                     /translation="IKKYFYRIFYCSFMQIGIMGLGLLGYNIGLRLLNCNFKINVYNR
                     TSSKSSSLARSGAIVLDSPKKIGDQSSIVAICVTNYAAINDLCFKEDGLMDANNKNMT
                     VLDFSTITPKESEICYSKFKENGITYLNTPVMGGPAAALEGKLIPIVSGEKSVYEKIS
                     SVICNLGNPIYYVGDKPGLANAIKLALNLNIGIIAVALSEGLILSESFGLDPSLYLKI
                     LNSTYFKTGMSENKGPRMIKGDYSPSFYLKHMKKDLSLVVGLAEDNDITLPITNSVLH
                     LFDYASKMGLANFDYTAIYTLVKKLNGMK"
BASE COUNT         1163 a          556 c          473 g         1211 t
ORIGIN      
        1 caggaaataa tagaattttt tgcatcatta tgtcttttac ctcccaagat cttagattct
       61 tctatactag gagtaggact gctaggaaaa ggattatgac gtagatgata tggatacaat
      121 tttataaaca ccttacaaag ccgtgcaata atccacgaat aattattccc tcttccccgc
      181 cagaagacaa ctcgtaatta tttttgaatt gatcaatcaa ttcttttgta taatagtaaa
      241 attgtttctc tgtgagttcg tgctttagac aaagatcatt tcgaactata gataatgcca
      301 cccaaccaat tgaaccagca ttttttgaaa ttgataaatc gaagtcaagt ttaaaagtat
      361 ttaaatcaat tgttttttct ggttttaaaa ccgattcctc atatcgttgg ttactgttcg
      421 ttaataaaga atccattagt aaaatgagtc gaccatctaa tttttcaaca tgtttattaa
      481 ctgaggaaga cagtccatga aatgagtctt gtaaatcttt caaaagctcg taaatatact
      541 taaatttagc atcggaatta ataagatatt gaaaatagtt atctttatgc caatagtaat
      601 atgtatttgc ttttttggca ataactacct ctccagtttt aagccattct tcaatttttt
      661 tatcaaagtc cgtacccgga tattcttttt ttaaggcaat cttttttacc ccttcttcac
      721 ctgaagaaaa aattttgtca aatatttttt cctctaaaga catggaatac atttttaatt
      781 ttcttataaa agatactggg tgataataga taaaataatt agtgaattta attttactat
      841 catagacctt tgggtttatt ctcaaattgc aacaaaatgg tcgttgtaaa attttacaaa
      901 attttactat aatttcccaa taaaataatt aacaattatt aataatacag atcaaatttg
      961 aatataaaat ccattattta ttaacgggat gatgaatact ttgctgatcg atgatgaaag
     1021 cactagggta tctgaccgct tactctttat agcttaaaac cttgtagaca ttctatagct
     1081 ctttatgaat tagtattgtc gaaaatcata gattatccaa tattcttatc ttggttttgc
     1141 ttcaacatag gatctttcaa atatgatttt tttggcccgt gtactaatgg aacataaatc
     1201 tcttgtcgaa aatttcctct ttctatgaaa atacatttta tggaattcga taccttgttg
     1261 actaacttgt tcttcctaac acatttagct aacctatcct agtcataatc ggggaactgg
     1321 agaaattata agtaactcta ttaaaaagag ttgagatatt acttgatatt aacgttattt
     1381 acatagatta aatagaatga acaatgatct aacaaacaat gaagatggat gtatttcttt
     1441 tgaagaattt ttaaacgtcg atttaagagt aggaaaaata aaaaaagtag agactgttcc
     1501 tcgtatggac aaaatataca aagccgaaat tgacattgga acagagaata gagatatagt
     1561 aattggagtg gctcagcatt ataagccaga acaattagag gggaaaattg tagttgtgtg
     1621 tactaacctt cgtccaaaaa agattggaca gatatttttc agaggaatgg tattagctgc
     1681 agaatgtgat aaagaaaaac cagttcttat tactattgat agtacagaga attgtagtct
     1741 aggatcaaaa attcattaat catattaaac attattatta tgattatttg tttccttttt
     1801 attatacaca tcttccatta ggtcttcgta ttccttatcg agatccttag tatctattct
     1861 tatttcctct agtttggaaa aagcattaat aatactctta gctgccaaag gttgtttaat
     1921 atctgttttt gaaatttctc caaacaatcc tattgcatct attcctcttt gccaagctaa
     1981 tcccaaaatc aaaccattaa accatgtaat attaccaatt tcgtttccaa ccaaatctat
     2041 tcctgaatta aacaaacgcg gctttagttc aggattattt gtcactccac aaactttggg
     2101 agcgcctgtc acttgttgtt ttaagtaacc gcctgcagaa tatagacatt tgattttccc
     2161 aatagataat atgtaatcta aaaaaatatt acataaacta tacagttcat ttgaatcctg
     2221 tggttgggaa tcaccagtaa aaattattat gttatatttt tctgaaaaat atattttata
     2281 aaaatcaagt atgggtttga caatcccatt aaaatgggat acccatggtt tttcaatagc
     2341 ttcaatgttt gcaatatttt ttgaatctaa ttttttggat aaaaaagaag atacgattcc
     2401 tccaacttta cccatatcag gtaaagatga tataaccata aaatcattaa gatgaatatg
     2461 ttccaaaatt tcaagtttca tatcttactt cattccattt aatttcttga ccaatgtata
     2521 gatagcggta taatcaaaat ttgctaatcc catttttgaa gcataatcaa ataaatgtaa
     2581 aactgaattt gttattggta aagtgatatc attatcctct gctagaccca caactaagct
     2641 tagatctttt ttcatatgct tgaggtaaaa agatggacta taatcaccct ttatcattct
     2701 aggaccttta ttctcactca tacccgtttt aaaataagta gaattcagaa ttttgagata
     2761 caaactcggg tctagtccga aactctctga taaaatcaac ccttccgaaa gcgctacagc
     2821 aattattcct atattaagat ttaaggctag ttttatggca ttagctaacc ctggtttatc
     2881 gccaacataa taaattggat tacctagatt acagattact gaactaattt tttcatacac
     2941 agacttttct cctgaaacaa ttggaataag ttttccttca agtgctgcag caggccctcc
     3001 catcactgga gtgtttaggt acgtaattcc attttccttg aatttgctat aacaaatttc
     3061 cgattctttt ggtgtaatgg tactaaaatc taaaactgtc atgtttttat tattagcatc
     3121 cattaaaccg tcctccttaa agcaaagatc attaattgct gcataattag tcacacaaat
     3181 ggcaacaatt gaggactgat cgcctatttt ttttggagaa tctaatacaa ttgctccact
     3241 tcttgctagt gatgatgatt tggaagatgt tctgttatat acattaattt tgaaattaca
     3301 atttaacagt ctcaaaccaa tattataacc caataatcca agtcccataa taccgatttg
     3361 cataaaagaa caataaaaga ttctataaaa atattttttt att
//
LOCUS       DATIAS010000669         2484 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1484264, whole genome shotgun sequence.
ACCESSION   DATIAS010000669 DATIAS010000000
VERSION     DATIAS010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484264"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..1363
                     /locus_tag="VLA74_13570"
     CDS             230..1363
                     /locus_tag="VLA74_13570"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF51783.1"
                     /translation="MNEKTIIKILGLKIHSMVSGVKFTDEGVSIENSNSKILLDPTKI
                     NNHDFVFVSHAHSDHVYRKPKNKKNIETLVSQETEMIANARGYDITNPIYDKKDFELI
                     DTGHILGSRGLLAYNDVYYTGDISIRKRGFMNPSKKIPKVDILIIESTFGKAEYIFPN
                     PKDIIHRTNNIISNAYEKGIPVIIMGYPLGKAQLLMDFFSHWDPFYVFDSIETINSVY
                     REMNIPLRDVITYGKAEKNNSLSKKPWIMLSSLMNGRTKLLKNIKEKYEAITIGFSGW
                     ACNPSYKYMMDLDYAMPLSDHCDYKDLLHVVEKGNPKKVFTFHGFADEFARSLINLGY
                     NAEPIWNGYRKDSNKANKKIKENKHLRSKIIERKDRSLDSFLK"
     gene            complement(1460..>2484)
                     /locus_tag="VLA74_13575"
     CDS             complement(1460..>2484)
                     /locus_tag="VLA74_13575"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSF51784.1"
                     /translation="TQIITACQMADRLDYDSIWAMDHTNVPQWKNAVVNDAWLLLAAI
                     GALTNKVELGTCVTDAIRRHPSSIALATITLDRITNGRGMLGIGAGEAQNVVDFGIEF
                     NKPVTKLKEQLEVIDKLFQSDPDNRVDYDGQYYRLINACLQAASIRKPRPPVYIAAGA
                     PKTLELCARYGDGWIPIGYTPELFKAHADVIRGHAKTLGRDLTDFQFANDVDIYFTED
                     GEEAWNKMKNAVKVSLYKPELLKVHNIQQDSEFDFRRYFTEYTMDKPELMEQMKKAAL
                     SIPDSVARTAIGVGKPDEVIEMLERFINSGVNHFIIRFWGDGYFKNIEMFGKKVIPYF
                     REQEKK"
BASE COUNT          880 a          410 c          376 g          818 t
ORIGIN      
        1 attatttatt ctaataccat attcacgaat ggattttacg actataatta tcagtaccaa
       61 atcagcagat cgtttgacgt ttgcagttca tattttgctt ttacaaaatt tcattctgat
      121 atgtcttacc taaagcacat aaaaattctt caattttttt agatatttgc ataatatgtg
      181 aacagcgaat caatttttat caaaaataaa gagatgttta tatcatgcca tgaatgaaaa
      241 aacaataatt aaaatattag gtttaaaaat ccatagtatg gtttctggcg tgaagtttac
      301 tgatgaaggt gtttcaattg aaaatagtaa ctcaaaaata ttgctagatc caacaaaaat
      361 caataatcat gattttgtat ttgtttccca tgctcattca gatcacgttt ataggaagcc
      421 aaaaaataaa aaaaatattg aaactttagt ttctcaagag acagaaatga ttgcaaatgc
      481 aagaggatat gatattacta atcctattta tgataaaaaa gattttgaat taatagacac
      541 tggtcacata ttaggatcaa gagggttact tgcctataac gatgtatatt acacaggaga
      601 tatatctata agaaaaagag gatttatgaa cccatctaag aagattccca aggtcgacat
      661 attaataata gagtctacat tcggaaaagc tgagtatatt ttccctaacc caaaggatat
      721 aatacatcga acaaacaata ttatctcaaa tgcatatgaa aaaggaattc cagttatcat
      781 tatgggatac ccgcttggaa aggctcagct attaatggat tttttcagtc attgggatcc
      841 tttttatgtc ttcgattcta tagagacaat aaattccgta tatagagaaa tgaatatacc
      901 tttaagggat gttataactt atggcaaagc agaaaaaaat aattctttat caaaaaaacc
      961 gtggataatg ctatcatcat taatgaacgg aagaacaaaa ttactcaaaa atattaaaga
     1021 aaaatatgag gctatcacca taggttttag cggatgggca tgtaatccaa gttataaata
     1081 tatgatggat cttgattatg ccatgccttt aagtgaccat tgtgattaca aagatctttt
     1141 acatgtagtt gaaaaaggca atccaaaaaa agtatttact tttcatggtt tcgcagatga
     1201 attcgctaga tctttaataa atttaggata taatgccgaa cccatttgga acggatatag
     1261 aaaagatagt aacaaagcaa ataaaaagat aaaggaaaat aaacatttga gatcaaaaat
     1321 aatagaaagg aaagatcgat cattggattc atttttaaaa taaaaaattt gttttatact
     1381 ttttaaaaaa atagatcttg aatacacact aatatcagat aaaaaaagtt gaaaattatt
     1441 aaaaaagtgt aaccttattt tatttctttt cctgttctct aaagtatggg attacttttt
     1501 taccaaacat ctctatattt ttgaagtatc catcacccca gaacctaata atgaaatgat
     1561 tcacaccaga attaataaaa cgctctagca tttcgattac ttcatcgggt ttaccaaccc
     1621 ctattgcagt tcttgctaca ctgtctggga tggataaagc agcctttttc atttgttcca
     1681 taagttctgg cttatccatt gtatattcag taaaatatct tcgaaaatca aattcggaat
     1741 cctgctgtat attatgaact ttcaataatt caggtttata aagactaact ttcacagcat
     1801 ttttcatttt gttccatgct tcttctccat cttctgtaaa atagatatcg acatcgtttg
     1861 caaattggaa atcagtcaaa tctctcccta aagtctttgc atgtccacgt attacgtctg
     1921 catgggcttt aaataactca ggggtataac ctatcggaat ccaaccatca ccatatctag
     1981 cacataattc gagcgtcttt ggcgcaccgg cggcaatata gacaggaggt cttggttttc
     2041 gaatactcgc agcttgcaaa caggcattaa ttagtctata atattgacca tcataatcaa
     2101 ctctattatc tggatctgat tgaaagagct tatcaataac ttctagttgt tcctttaatt
     2161 tggtaacagg tttattaaat tcaataccaa aatctacaac attctgagct tcgcctgcac
     2221 caataccaag cattcctcta ccattagtta ttctatccag ggttatggtt gccaaagcta
     2281 ttgaagaagg atgtcttcta attgcatctg tgacgcatgt acctaattca actttatttg
     2341 ttaatgcacc tatagctgct agtaataacc aagcgtcatt tactactgca tttttccatt
     2401 gaggaacgtt agtgtgatcc atggcccata tcgaatcata atctagtcta tcagccatct
     2461 ggcatgcagt tataatttgt gttt
//
LOCUS       DATIAS010000670         2228 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_259206, whole genome shotgun sequence.
ACCESSION   DATIAS010000670 DATIAS010000000
VERSION     DATIAS010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259206"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            329..2005
                     /locus_tag="VLA74_13580"
     CDS             329..2005
                     /locus_tag="VLA74_13580"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HSF51785.1"
                     /translation="MCGICGLISKHSTNVTPLTKTMMISMNKRGPDGTGLLIDNKVYQ
                     YESPEKILCTSSNANTKLALGHIRLAIVGESNYIQPFKSCDNRLVMEHNGEIYNYKML
                     KEKLKKEHKFVSNTDSEVIVHLLEHYYKETGFSDLLKAIRKTVADLDGIYALAIKDQN
                     EDKIYLVRDRLGIRQIYYGQSDKVIGFASERKGLWQIGIKEPTISLLPGHCVILSDKI
                     SPPIKISEPPINYSSEPTFSNLEDAILSYKMALYNSIKKRSQDLSRIGIIFSGGIDSV
                     LIAKITKELVPNVTCYTSGIAGSDDIKFSKIIADELDLDLKINELDVKDIENMLPNIL
                     NIIETNNSTQAEVSIPVFGALNLAAKDGLRVVFTGQGADELFGGYSWYGKIFSKYGYK
                     KLKEYMIQDLLLLYKETLEREDKLAMANSIEMREPFLDSEVVKTATSINMNLNIVNNN
                     DIFGKRVHRELAIRVGIPKYIAYREKQAAQHGAGIHGILSKIAEKNGFNKKMVTKEYI
                     ANIAKREKIGSSERYGYLFDDKISWNSATWVQLYLDKLTNLNQIACEIKR"
BASE COUNT          873 a          273 c          373 g          709 t
ORIGIN      
        1 atttctccag ttcacataat atgactagaa taggttagct aaatgtgtta ggaagaggga
       61 attacgcaac aaagcatttt attaatataa taaaatcatt ataaaaagta tttattttag
      121 atatttttta taattatttc atatgttctg taaataatat tctataaatt gtaaaaatga
      181 aatacatttt atcatttata atccaaatgg aatttttcaa tgtaattcat acaaaaaaat
      241 aagaaaaagg cttattttat aaccataatt aggatacata atattttttt tgaaaaagac
      301 ttattaataa tgagaacgtt aataagatat gtgtggaata tgcggactaa ttagtaaaca
      361 ttctactaat gtgacacctc ttactaaaac aatgatgata tcaatgaaca aaagaggtcc
      421 tgatggaact ggtctattga tagataataa agtttatcaa tatgaatcac ctgaaaaaat
      481 actttgtact agttctaatg ctaatactaa actagcttta ggtcacatcc gccttgccat
      541 agtaggcgag agtaattata ttcaaccttt caagagttgt gataacagat tagtaatgga
      601 acataatgga gaaatttaca attataaaat gcttaaagaa aaattaaaaa aagaacataa
      661 gttcgtatca aatactgata gtgaagttat agttcattta cttgaacatt actataaaga
      721 aaccggattt tctgaccttt taaaagcaat aaggaaaaca gtggcagatt tagatggtat
      781 atatgctctt gctataaaag atcaaaatga agataaaatt tacctagtta gagacagatt
      841 aggaataaga cagatatact atggccagag tgataaggtt ataggttttg cttccgaacg
      901 taaaggcctt tggcagatag gtattaaaga acctacaatc tcactattgc ctggtcattg
      961 tgtaatttta tcggataaaa tatctcctcc cattaaaata tccgagccac ctattaacta
     1021 cagtagtgaa cctacttttt caaatttgga agatgcaata ttatcttaca aaatggcttt
     1081 gtataattct atcaagaaga ggtcccagga tctttctaga atcggaataa ttttttcagg
     1141 tgggatcgat agtgtactta ttgctaaaat tacaaaagaa ttggttccta acgttacttg
     1201 ttatactagt ggaatagcag gttctgatga tataaagttt tcaaagatta ttgcagatga
     1261 attggatttg gatctaaaaa tcaatgaatt ggatgtaaaa gatattgaaa atatgctgcc
     1321 caatatctta aatataattg aaactaataa tagtactcaa gcagaagttt ctattcccgt
     1381 ttttggagca ttgaatttag cagctaagga tggtctcaga gtagtattta caggtcaagg
     1441 tgcagatgag ttgtttggag gatattcatg gtatggaaag attttttcca aatacggtta
     1501 taaaaaactg aaagaatata tgatacaaga tttgctgttg ctatacaaag aaacacttga
     1561 aagagaagat aaattagcta tggcaaatag tattgaaatg agagaaccat ttttagattc
     1621 agaggtcgta aaaactgcta ccagcattaa tatgaatcta aatatagtca ataataatga
     1681 tatttttgga aaacgtgtac atcgagaatt agcgatacga gtaggaatac ctaagtatat
     1741 tgcatataga gaaaaacaag ctgcacaaca tggtgcagga attcacggaa tcttatcaaa
     1801 aattgcagag aaaaatgggt ttaataaaaa aatggtaacc aaggaatata tagcaaatat
     1861 tgcaaaaaga gaaaaaatag gtagctctga acgctatggt tatttatttg atgataaaat
     1921 ttcttggaat tctgcaacat gggttcaatt atatctagac aaactgacta acttgaatca
     1981 aatcgcatgt gaaataaaaa gataaaatgt attaaaattt tttagaaaag aatatgttca
     2041 tctgacttat acctaaaagc cagatgaaaa gcgatattat tacatatcaa cctgctctat
     2101 tagtaataga tgtacaaaat ggttttatga gtaaaggtgg ttcttatgat cttcttggta
     2161 tgaaaatatc aaactatcag aagattattc ctaaattaaa agaattaata tcaatatgta
     2221 gaacatat
//
LOCUS       DATIAS010000671         2006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_259486, whole genome shotgun sequence.
ACCESSION   DATIAS010000671 DATIAS010000000
VERSION     DATIAS010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259486"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..>2006
                     /gene="topA"
                     /locus_tag="VLA74_13585"
     CDS             164..>2006
                     /gene="topA"
                     /locus_tag="VLA74_13585"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="HSF51786.1"
                     /translation="MKDDKDNFSKLAIDKKKYSLIICEKPGVANRISHVLASKTVNQI
                     RINNSRIYEISYNSSNYVVISSKGHLYTLNDFYKDRKLFPVFDLSWVPIRGNQINQQN
                     KKLIDLIKRLSENADKIIHACDYDPEGELIGYNILQFACNNKYHHCLRAKFSTLTDEE
                     IIDSFNNLEKPNTGMAYAGMFRHMLDFIYGINFSRSLMSSINFKEIKTNLTVGRVQSP
                     TLKFVIDRDYEINCHVPLPYWSIKIQFEKDNQSLLLSYIKPRISSIDEAEIVLKDCQN
                     IDGLVSEISQTNEHLQAPYPFNLGDLQKESFRLFRFSPSYTLFIAEKLYLQALISYPR
                     TNSQTLPNSINNKRILKDLAKISHEYEIIVYKLLSQKKLYPNNGNKSDPAHPAIHPTG
                     RKPSRLTSQEFKVYDLIVKRYFSTFGESTINSKTTIYVTISKKHVFYITDYVVSKEGW
                     IDFYVPYNNMSKHSNHLPKLKVGDKLKNIKIIKEEKFSEPPKRFNYSSLLSKMEKEEI
                     GTKSTRANIMDSLIKRNYIEVKKNILFPTKLGMILIDYLQKKSPRILSTELTRMLEKY
                     LREIELGVRNYSNILDDVINDILLSIHNYKKNDLEIDSSTINMLKNQT"
BASE COUNT          782 a          297 c          283 g          644 t
ORIGIN      
        1 ttgccgaaac agttatacgc ataatcaaat ttgaattatt aattgtttat atcttttctg
       61 ataatatttc atattttgat aatatcgtga tactttgctt ccaaatatat ttcataataa
      121 aagggtaatt ttttattgca aataatatta aatatcctta tgaatgaaag acgataaaga
      181 taacttttca aaattagcga tagataaaaa aaaatattcc ctgattatct gtgaaaaacc
      241 tggtgtagca aatagaatat ctcatgtttt agcatcaaaa acagttaacc aaattaggat
      301 taataatagt aggatatatg aaataagcta caatagctca aattacgtag ttatttcatc
      361 aaaaggtcat ctgtatacct taaatgattt ttacaaagac agaaaacttt ttccagtttt
      421 tgatttaagt tgggttccaa taagaggaaa tcaaataaat caacaaaata aaaagctaat
      481 agatctgata aaaagattgt cagagaacgc tgataaaata attcatgcat gtgattatga
      541 tccggaaggt gagttaatag gatacaacat tttacaattt gcttgtaata acaagtatca
      601 tcactgtctg cgagcaaaat tttcaacttt gactgatgaa gagattatag actcatttaa
      661 taatttggaa aaacccaaca ccggcatggc atatgcagga atgttcagac atatgctaga
      721 ttttatttat ggtatcaatt tttctaggtc gttaatgagt tccatcaatt ttaaggaaat
      781 taaaacgaat ctaacagttg ggagagttca gagtccaact cttaaatttg taattgatag
      841 ggattacgag atcaactgtc atgttccttt accttattgg agtataaaaa tacagtttga
      901 gaaagacaat caatctctat tattatctta tattaaacca agaataagca gtattgatga
      961 agcagaaatt gtattaaaag attgccaaaa tattgatggg ttagtaagtg agatttcaca
     1021 aacaaatgaa catctacagg ccccttaccc atttaaccta ggagatttac aaaaggaatc
     1081 ctttagatta tttcgatttt ctcctagcta tactcttttc atagccgaga aattatactt
     1141 gcaagcactt atatcctatc ctcgtactaa tagtcaaact cttccgaatt ctatcaacaa
     1201 taaaaggata ttaaaggatc ttgctaagat atctcacgaa tacgaaatca ttgtctataa
     1261 attactatca caaaagaaat tatacccaaa caatggtaac aagagcgatc cagcacatcc
     1321 tgcaattcat cccactggca gaaagccctc acgcttaaca tctcaagaat ttaaggttta
     1381 tgatcttatt gttaaaagat atttctcaac atttggtgaa tcaacaatta attcaaaaac
     1441 tacaatttat gtaactatca gtaaaaaaca tgtattctat ataactgatt acgttgtttc
     1501 taaagaaggt tggattgatt tttatgttcc ttataacaat atgtctaaac attctaatca
     1561 tttacctaaa ttaaaagttg gagataaatt gaaaaatatc aaaataataa aggaagaaaa
     1621 atttagcgaa cctcctaagc gtttcaatta ttcttcttta ttgtccaaaa tggaaaagga
     1681 agaaatcgga actaaatcta caagagctaa tataatggat tcactcatca agagaaatta
     1741 catcgaagta aaaaaaaata tcctttttcc taccaaactt ggaatgatat taattgacta
     1801 tttacagaaa aaatctccaa ggatactttc aactgagcta acgagaatgc tagaaaaata
     1861 tttacgagag attgagctgg gagttagaaa ctattcgaac attttagatg atgtcataaa
     1921 cgatatttta ctatctattc ataattataa aaaaaatgat ttagaaatag actcttctac
     1981 catcaatatg ttaaaaaatc aaactg
//
LOCUS       DATIAS010000672         2864 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1348012, whole genome shotgun sequence.
ACCESSION   DATIAS010000672 DATIAS010000000
VERSION     DATIAS010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1348012"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VLA74_13590"
     CDS             complement(<1..547)
                     /locus_tag="VLA74_13590"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HSF51787.1"
                     /translation="MDFEELKDFIKNKMKMQHIYQPVMIKTLLKSDNNRASIRIIAKE
                     FSNLDESQIDYYKVITRQMPGRVLKKHGIVFETLAGYSLNISYLTDSQRRDLIDLCNQ
                     KIGQYIHTKGGERRIWLYRMKTTSYVPGTVRFEVLKRAKGRCELCGVPASQKFLQVDH
                     ILPRNKGGKSTIDNYQALCYTC"
     gene            855..1160
                     /locus_tag="VLA74_13595"
     CDS             855..1160
                     /locus_tag="VLA74_13595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51788.1"
                     /translation="MQKETKSSPVLRSKIVKTGNILRNTALYQIKEYEDKFPKINRVY
                     DELFKDLIIDKYSIDDAVKSVKKLFDKQVLNFVAIDGTEYSRPLFDMIFLSKKISTQ"
     gene            1295..>2864
                     /locus_tag="VLA74_13600"
     CDS             1295..>2864
                     /locus_tag="VLA74_13600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51789.1"
                     /translation="MEKEPRSSPVLRSKIVKTGNILRNTALYQIKEYEDKFPKINRVY
                     DELFKDLIIDKYSIDDAVKSVKKLFDKKVLNFVAIDGTEYSRPLFDMMIFYAGAYSCE
                     GGIDFSEEDNLKIRYKNKFLEHSSDVSSCVPVYIDKIPEIDRTFHDLDGKINLNSSFT
                     EEAIINNTNVANFLMTFSEFYLAYKYASAKSHDIILMDRSLSNMYSSLLYDTSNRKVW
                     STNLSILDYDTDGQKLDINDLTIARYNLINEQLNLPSPRGNYLRYTIFILLSKIYPDE
                     ISLDQIIESLKINDNKSTRNRIKTYIQTSIKEGIIIENEKDKKYTIIEKYRSTWTRIK
                     KLVRELGDKIFTDEKEPFVLTKEKGKKEWLTTLDLSFLTLFSFYMLIEECWKNNILLI
                     GITKDTTAKEFKNHVIPICLRNNIWTYNEKLKSSLEDGPSTDRMLLQFLSILNNQKIN
                     VPWSLIEYDAAFVMTIPDFRNREGYVSGAIKNNIIQSQLFLRSFVQLGKSNRDKKLRS
                     NVLAIDRLAYPEIDL"
BASE COUNT         1107 a          414 c          451 g          892 t
ORIGIN      
        1 tacatgtata acacaaggct tgatagttgt caattgtaga ttttccacct ttatttctcg
       61 gcaggatgtg gtcaacttgc aggaattttt gactggcagg gactccacat aattcacatc
      121 ttccttttgc acgttttagt acctcaaatc tgacagttcc tggaacataa gaagtagttt
      181 tcatacgata tagccagatt ctacgttctc ctccctttgt atgaatatat tgacctattt
      241 tctggttaca aagatcaatt agatctcttc tttgcgaatc agttaaataa gaaatattaa
      301 gggaataacc agccaatgtc tcaaaaacta taccatgttt ctttaaaact ctcccaggca
      361 tctgtctggt tattacttta tagtagtcaa tctgactttc atccagattg gagaattctt
      421 tagcaataat acgaatggag gctctgttgt tatcggattt aagaagagtc tttatcataa
      481 ctggttgata aatatgttgc attttcattt tatttttaat aaaatccttt aattcttcaa
      541 aatccacgaa atgttattag aattgctaag aagtaaactt tgggttcaaa ttacactact
      601 atattcagta ggtttgaaaa ttgatgatta atctgattaa aatcttatta aatgaacttg
      661 aatgaacttg aagatttaaa aatacatacc aagattagaa ataaatatca tcacaatgat
      721 taaagaacaa aactcaaaca agaattctga aaacctgccc tgacaaacga aatgaatatg
      781 gattgataac cataggaact ctcttgtgcc acaaatagaa agccttataa ttatttttcc
      841 tagattattc ttatttgcag aaggaaacaa agtcgtcacc agtcttgaga tcaaaaatag
      901 tgaaaactgg aaatattttg agaaataccg ccttgtatca gataaaagaa tacgaggaca
      961 aatttccaaa gatcaataga gtctatgatg aattattcaa agatctaata atagataaat
     1021 atagtataga tgatgcagtc aaatctgtta aaaaattatt tgataaacaa gtcttgaatt
     1081 ttgtagcaat agatggtaca gaatattcta gaccgctgtt tgatatgatt tttctgtcaa
     1141 aaaaaatatc aacacaatga ttaaaaaaca aaactcaaac aagaattctg aaaacctgcc
     1201 ctgacaaatg aaatgaatat gaattgatac ccatgatagc ctcttctgcc acaaatagaa
     1261 aaccttataa ttatttttcc taaatcattc ttatttggag aaggaaccaa ggtcatcacc
     1321 agtcttgaga tcaaaaatag tgaaaactgg aaatattttg agaaataccg ccttgtatca
     1381 gataaaagaa tacgaagaca aatttccaaa gattaataga gtctatgatg aattattcaa
     1441 agatctaata atagataaat acagtataga tgatgcagtc aaatctgtta aaaaattatt
     1501 tgataaaaaa gtcttgaatt ttgtagcaat agatggtaca gaatattcta gaccgctgtt
     1561 tgatatgatg attttttatg ctggtgcata ttcatgtgaa ggaggtatag atttttcaga
     1621 agaggacaat ttaaaaatca ggtataaaaa taaattttta gagcattcca gtgatgtatc
     1681 tagctgtgtg cctgtatata tagacaaaat accagagata gatcgcactt ttcatgattt
     1741 agatggaaag ataaatttga acagttcctt tactgaagag gcaataataa acaataccaa
     1801 tgttgcaaat tttcttatga ctttctcaga attttatctt gcttacaagt atgcctctgc
     1861 taaaagtcac gacataatat tgatggatag aagtttatct aacatgtact ctagcctatt
     1921 atacgatact tcaaacagaa aagtatggtc aacaaatttg tcgatcttgg attacgatac
     1981 agacggtcaa aaactagaca taaatgatct aactatagca cgttataatc taatcaacga
     2041 acaattgaat cttccatcac caagaggtaa ttacctcaga tataccattt tcatattact
     2101 atctaaaata tatccagacg agataagttt agatcaaata atcgaatcac ttaaaataaa
     2161 tgataataaa agtacacgta atagaataaa aacatatatt caaacgtcaa taaaggaggg
     2221 aataattata gaaaatgaaa aggataaaaa atatacaatt atagagaaat acagatctac
     2281 atggacaaga ataaagaaac tagttcggga attgggagat aaaatcttta cagatgaaaa
     2341 agaacctttt gttttaacaa aggaaaaagg taagaaagaa tggcttacta cacttgacct
     2401 ttcgttttta actttattta gtttttatat gctcatagaa gaatgctgga agaataatat
     2461 tttattaatt ggaatcacga aggatactac tgctaaagaa ttcaaaaatc atgtaattcc
     2521 aatatgttta cgaaataata tatggactta caatgagaaa ctaaaaagca gtcttgaaga
     2581 tggacccagt actgacagaa tgttactcca atttttaagt attttaaata accagaaaat
     2641 aaatgtacca tggagtttga tagaatatga tgcggcattt gttatgacaa ttccagattt
     2701 tcgaaacaga gaagggtatg taagtggtgc tataaaaaat aatataatcc aaagccagtt
     2761 atttctaagg tcatttgtcc aattgggcaa atcaaatagg gataaaaaac taagaagcaa
     2821 tgttttggca atagatagat tggcatatcc agaaatcgat ctta
//
LOCUS       DATIAS010000673         3031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1348280, whole genome shotgun sequence.
ACCESSION   DATIAS010000673 DATIAS010000000
VERSION     DATIAS010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1348280"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..1457)
                     /locus_tag="VLA74_13605"
     CDS             complement(231..1457)
                     /locus_tag="VLA74_13605"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51790.1"
                     /translation="MKIRIDYINLNLLTVIAFFSLILFSNSLLKISIDHEDNLINSIF
                     GQNRNAFAVGMDVEDDEEKSFEYVFDPSDYIEDADSEKELDSNTNNNVEDDTQSIKEY
                     EETGLSHDNKEDKDESTFTSKSTKEEESDHKSDFNFVAVGDWDCKSETKDTVENILEQ
                     DPEVVLALGDLSYNGNAECWLDIIEPIADKTEIAIGNHEHDSSKTLRDYIQYFGLEKQ
                     YYSFNYKTVHFIALSTEIPYEEGSQQYEFVVQDLEESSKDRSIDWIVAFYHRQAYSSG
                     GGPEDDDDFRDTYHPLFDKYRVDLALQGHFHAYERLYPISFNYDDGYEPIVEDYDPSY
                     YINPKGTIFITAGTGGAHDMKISEIKPFSAFGLDGKFGILNISVENNGITLKGSFIEN
                     NDEEGVYDQFQIIKER"
     gene            2462..>3031
                     /locus_tag="VLA74_13610"
     CDS             2462..>3031
                     /locus_tag="VLA74_13610"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HSF51791.1"
                     /translation="MATLNIPKWSISGDWFDVCKCNIPCPCEFAQTPSYGDCDGVMAY
                     HINNGNYGETPLDGLNVLALMSFEGNIWAGNTKANIAFFFDEQANQQQREALQMIFSG
                     KAGGFMAQLAKLIGEHRGVSFALIKFQVADDLSYWSAEIPGKIFARAEALSGPMTPPG
                     KRVQTTNPPGSEVGPGTVATWGRAISDKVD"
BASE COUNT         1001 a          472 c          456 g         1102 t
ORIGIN      
        1 gtgggtttcg atttgactaa tgtcatatat ggaagtttaa caaatttttg cttatggaac
       61 tattatctga acgttatcaa tattttatta tgaatatatc cttaataaat agacaaaagt
      121 aacataataa tttatcccat atttcatacg cttcaagact tattcattgt aatttaaatt
      181 ttctgctcaa tattgatgta gaaaaagtaa ctataattct tttttatttt ttatctttct
      241 ttaataatct gaaactggtc atatacaccc tcctcgtcat tattctctat aaacgaacct
      301 tttaatgtaa ttccgttatt ctctacagag atatttagta ttccaaattt gccgtctaat
      361 ccaaaagcag aaaagggttt aatttctgag atcttcatat catgtgctcc tcctgtaccg
      421 gcagttataa aaattgtccc ttttgggttt atgtaatatg agggatcata atcctcaact
      481 ataggttcat agccatcatc atagttaaag ctaattggat ataatctctc ataggcatga
      541 aagtggcctt gcagagctag atctacccta tatttatcaa acaatggatg atatgtatcc
      601 ctaaaatcat catcgtcttc aggaccgcct ccagaactgt atgcttgtct atgataaaaa
      661 gcaacaatcc agtcaattga tcgatcttta gaagactctt caagatcctg aactacaaat
      721 tcatattgct gtgacccttc ttcatatgga atttctgtag atagtgctat gaagtgaaca
      781 gttttataat taaaagaata gtactgtttc tccaatccaa aatattgtat ataatctctc
      841 aaagttttcg atgaatcatg ttcatgattt cctattgcaa tttcagtttt gtctgctatt
      901 ggttcaatta tatccagcca acattctgcg ttaccattat acgaaagatc tcccagtgcc
      961 agcaccactt ctggatcctg ttccaaaatg ttttctacag tatccttagt ttcagattta
     1021 cagtcccaat ctcctacagc tacaaaattg aaatctgatt tatggtcaga ttcttcttct
     1081 ttcgttgatt ttgatgtaaa tgtagattca tccttatctt ctttattatc atgggaaagt
     1141 cctgtttctt catattcttt tattgactgg gtatcgtctt ctacattgtt gttagtattt
     1201 gaatctaatt ctttttcaga atcagcatct tctatataat cagatggatc aaatacatac
     1261 tcaaacgatt tctcttcgtc atcttcaaca tccatcccaa ctgcaaaggc atttctattc
     1321 tgaccaaaaa ttgagttgat taaattgtct tcatggtcta tacttatttt aagtagacta
     1381 ttactaaata atattaatga gaagaaagct atcactgtaa gtaaattaag gttaatataa
     1441 tcaatacgaa tcttcaaatg actagaaatt tatcaaattt gttactttta atattttgtc
     1501 tattattgaa cagtagaaag tattgggctc atttaattat taatgttact tataaaaaga
     1561 tataaacgaa tttggtagaa aagtcttata atattctatt atatgagaat aataataaat
     1621 tatatatttt aaaatttact tattcaattt catatcttaa ttttgaaatg ttttattcca
     1681 aacatgtttc caatttcaag gttaataact cttcaagatt ctgaaactct tctgataaac
     1741 aaaatttctt tgcattagac aaatatgtgt tatcttttaa ttaaatagca cccacctaaa
     1801 attactccca ttgcaataat ttgataaata gtaatatttt catttaaata cagtgtggca
     1861 aatcccaaaa attgaagata tagaaaataa ttatattgtt tttatcattc cgatcctttt
     1921 aagggtatga agaaaaaaga ataaagaacc tgcaattccc aatgatcctg ctaatactaa
     1981 acatggtaaa tgaatcttta taaaaaatgt ggggaagtga agggaaagtg aagggaaagg
     2041 caaaggtcaa tttatcgaaa atcgccgtat aaaaacatac atatttgtaa tgggccgggt
     2101 cgttggagtt acaaatttgt tactaatcta tataaagtaa tatcgattat gtgtaattag
     2161 aaacttattg ttctaataag ttattcatgt atttggaaat gaccttgaac cctttttcct
     2221 aaaatttttc ttactttgca atacgattta tttgagtgaa ttatttttta attcttgtat
     2281 ttggtttggt cacagactta acatcaaacc ttatttttta tgatttattt cttgtttatc
     2341 taaatttttt ttataatttt tcttatttag gcaaatattg taataaatat tatttttgat
     2401 ttacattaaa gtaaagtaat atttaaaact aaaatacttc ttattctatt taaaatacat
     2461 aatggcaaca ctcaatattc caaaatggag tatttctgga gattggtttg atgtatgtaa
     2521 atgtaacata ccttgtcctt gtgaatttgc tcaaactcca agttatggcg actgtgatgg
     2581 tgttatggct tatcatatta acaatggaaa ttacggtgaa acacctctgg acggattaaa
     2641 tgtgttggca ttaatgagtt ttgagggtaa tatctgggca ggtaatacaa aagcaaatat
     2701 tgcatttttc tttgatgagc aagctaacca acaacaacgg gaagctttgc agatgatatt
     2761 tagtggaaag gcaggaggct ttatggctca acttgcaaag ctaataggag aacatcgtgg
     2821 cgtaagtttt gctctcatca agtttcaagt tgctgatgac ctttcttatt ggagtgcaga
     2881 aatccctggc aaaatatttg caagggcaga agcattgtca ggacctatga caccacctgg
     2941 taaaagggta caaacaacaa atccgcctgg aagtgaagtg ggtccaggta cagttgcaac
     3001 atggggaaga gcaatatcag ataaagttga t
//
LOCUS       DATIAS010000674         2718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1077468, whole genome shotgun sequence.
ACCESSION   DATIAS010000674 DATIAS010000000
VERSION     DATIAS010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077468"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..715
                     /locus_tag="VLA74_13615"
     CDS             323..715
                     /locus_tag="VLA74_13615"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51792.1"
                     /translation="MFTKSIAIIDDDPDLLNIFSEALKISGYDVSSFSDPLLAYEHIK
                     ENSDKYSLLIIDDKIPNVNGLFMGTKLLEINPKLNVIIMCDFANLKCNYKFNILKKRI
                     SIYKLIDAVNESISQSFLYDDKLYNSLE"
     gene            complement(945..1259)
                     /locus_tag="VLA74_13620"
     CDS             complement(945..1259)
                     /locus_tag="VLA74_13620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51793.1"
                     /translation="MKSNYDSKHNNKLIIIPPKTDPIYHNLYHLQNIAKWKDQRLELI
                     EIPKGLIDILQDSGFTVEKILDCRPSHIAEKLGIDSYVGEIIYKETSKAISKINLNLL
                     IN"
     gene            1361..1552
                     /locus_tag="VLA74_13625"
     CDS             1361..1552
                     /locus_tag="VLA74_13625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51794.1"
                     /translation="MIILICENCGHKFPSKEIELTNVDITNEYIRKNWNCPKYNTEGL
                     TIFINNKTLNTNNKILNRK"
     gene            1676..1819
                     /locus_tag="VLA74_13630"
     CDS             1676..1819
                     /locus_tag="VLA74_13630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51795.1"
                     /translation="MEEKYIIMSSEIRPKACTYGCGVEIYWNTEENSWSYIQGKNMFV
                     QTE"
     gene            1816..2160
                     /locus_tag="VLA74_13635"
     CDS             1816..2160
                     /locus_tag="VLA74_13635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51796.1"
                     /translation="MTTKKPSVILPPPTAAKPTYYKKGFSNPKPKMDNSFELLTGSPE
                     SIKIQYEYLSDWVRDSGGKVHGSQSHIIIANNNIQLIVYYEVPEGQRDEIKRNFDQFS
                     RNVLLVYNRNRG"
     gene            2269..2487
                     /locus_tag="VLA74_13640"
     CDS             2269..2487
                     /locus_tag="VLA74_13640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51797.1"
                     /translation="MIKVNIESTSGKYDIDGIKEFENLDKAIKYCWDISDYEEVIVKK
                     PYTIKIKTVRELSTDYDYDLEIYDDYRE"
BASE COUNT         1035 a          354 c          411 g          918 t
ORIGIN      
        1 tattgtactc cacatcataa cataatagct gtatgctcat tatttgatac taatcaatat
       61 aatgctactt taataagaat agaatatatg ctaacaccag aagattataa gaaacttcca
      121 gagagagaaa aaccagaata gaggatagtg tgtaaagcat atgagcctca atgaacctcc
      181 tcttcttttg ttatttttgt tgttattcgt taactgcttt aagtatagta gtattgtata
      241 atcaaaattt tcagaaaaaa agagaggaga atatacaaat catgcttaaa tagatttttt
      301 atgtttaaat ctctagtcta gaatgtttac taaatccata gccataatcg atgatgatcc
      361 agatttatta aatatattta gcgaggcgtt aaagataagt ggctatgatg tttctagttt
      421 ctctgatccg cttttggcat atgagcatat caaggaaaat tcagataaat actcgttatt
      481 aattatcgat gataaaatac ccaacgtaaa tgggttattt atgggaacca aactcttaga
      541 aataaatcca aaactaaatg taatcataat gtgtgatttt gctaacttga aatgtaatta
      601 taaatttaat attcttaaaa agcgtatatc gatatataaa ttaattgatg ccgtgaatga
      661 aagtatatca caatcttttt tatatgatga caaactctac aattctttag aataaaataa
      721 ttagtaaaag ccatagccca ctattaatga atcccttata acaatctgta gaaggctatg
      781 gtaatattat gctaagtagt atatgtctaa tctatccttc tgtctttctt tggactttac
      841 tacaagatat gatattgggt acagaaaacc gttatacata ttagataata cttgaagaca
      901 atttaactat tgtcgtagtc tggaataatc ttaagtatta tttattaatt tattaacaaa
      961 ttaagattta ttttgctaat tgctttactt gtctctttat atattatttc ccctacatag
     1021 gaatctattc ctagtttttc tgcaatatga gaaggtctac aatctaatat tttttcaact
     1081 gtaaaaccag aatcttgtaa aatatctatt aatccctttg gaatttctat gagttctaat
     1141 ctttgatctt tccattttgc tatattttgt agatgataaa gattatgata aattggatct
     1201 gttttaggag gaattattat tagtttatta ttatgtttac tatcataatt actcttcatt
     1261 gtagtatatt taaagattta taacaactgt atattatttc tatatacatt tctatttttt
     1321 acaatgagaa taaataaaaa aggagaaaga aaagaagaaa atgataatat taatatgtga
     1381 aaattgtggt cacaagtttc caagcaagga aatagaattg acaaatgtag atattactaa
     1441 tgaatatatt agaaaaaatt ggaactgtcc aaaatacaac acagaagggt tgacaatatt
     1501 catcaataat aaaacattaa ataccaacaa caaaattctt aacagaaaat gagtataata
     1561 ctattctgtt ctaaatatgg aaatcatcaa actgagttta caattaaaaa tgcttgtttg
     1621 atatgtaaag attactggac aggatgagca ttgaaaccta acaaacgtct ataaaatgga
     1681 agagaaatac attatcatgt cctcagaaat acgacccaag gcttgtacgt atggctgtgg
     1741 agtagaaatc tattggaata cggaggaaaa tagttggagt tatattcaag gaaaaaacat
     1801 gtttgtccaa acagagtgac aactaagaaa ccctcagtaa tactaccacc accaactgca
     1861 gcaaaaccta cctactacaa aaaaggattt tcaaatccaa aaccaaagat ggataattct
     1921 tttgaattgc ttactggatc accagaatcc ataaaaatac aatatgaata tctttcagac
     1981 tgggtaagag attcaggagg aaaggtgcat ggttctcaat ctcatattat tattgcaaat
     2041 aataatatac aattaatcgt atattacgaa gttccagaag ggcaacgaga tgaaattaag
     2101 cggaattttg accagttttc tagaaatgta ttgcttgtat ataatagaaa tagggggtaa
     2161 gtgcgatatt tcgtcaaatt ccggttgtat tattttgatt agaattgggt attgcactct
     2221 atttattgtc taaatttgct gctttagagg tgagaactaa aatccaaatt gattaaagta
     2281 aatatagaaa gtacatctgg aaaatatgat atagatggaa taaaggaatt tgaaaattta
     2341 gataaagcca taaaatactg ttgggatatt agtgattatg aagaagtgat tgtaaagaaa
     2401 ccatatacta tcaagattaa gacagtgaga gaattatcaa cagattatga ctatgattta
     2461 gaaatatatg atgattatcg agaataaata atatattttt atttactttc taggcactaa
     2521 tacacatcta caattataat gtaaaggtgg aacaggtaag aacctatctg ataatctaaa
     2581 gatttagtct attctttaaa gactctaggg atagtttcct ttcctactga aactttcttc
     2641 tttctaatta aggttccata tgaaaatcta gatgcagata aatttgcaaa tcgacttaca
     2701 gaacataata tacatgta
//
LOCUS       DATIAS010000675         2178 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1485409, whole genome shotgun sequence.
ACCESSION   DATIAS010000675 DATIAS010000000
VERSION     DATIAS010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1485409"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VLA74_13645"
     CDS             <1..315
                     /locus_tag="VLA74_13645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51798.1"
                     /translation="VIVGVGISLMQVGGFNIITTYTPKKFSDISVGVTSLLFIVGMSI
                     GPAISASFLQNFLVQIEEIGIYPSLQAYDLIFFTAVMLSLIPLMLIFLIKKRIIKHVK
                     SI"
     gene            454..807
                     /locus_tag="VLA74_13650"
     CDS             454..807
                     /locus_tag="VLA74_13650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51799.1"
                     /translation="MSQKLLEFDFPTLAELGDMGRKNRIDVFRRYFATSRYNRLLIQI
                     ALVRSALDKSSIRSVSDLECQHNRDFIRISQMMSQLDYHNEFLEAVREEETALEKIIE
                     AYDRKINQTMSGKYR"
     gene            complement(1150..1467)
                     /locus_tag="VLA74_13655"
     CDS             complement(1150..1467)
                     /locus_tag="VLA74_13655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51800.1"
                     /translation="MSNNSQTPLWPLLTGVATLSMSAILFILKSGILVAVLFLLLGSS
                     LMLSWYYFYNKNKYTSKKKGSECVCTICGHNDSEICLQNKCACCIVMKNDKIIGHTNN
                     PLQ"
     gene            complement(1496..1735)
                     /locus_tag="VLA74_13660"
     CDS             complement(1496..1735)
                     /locus_tag="VLA74_13660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51801.1"
                     /translation="MSYKLLTQEEQENKEEILNLTEEVLDSKGLECDSRISKLSKEEI
                     EEILKEVRKKRMKKKQSKDTEEIETASYQEVTTYK"
     gene            complement(1956..>2178)
                     /locus_tag="VLA74_13665"
     CDS             complement(1956..>2178)
                     /locus_tag="VLA74_13665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51802.1"
                     /translation="QKDFWYGSQSNRASVLGSVLCSWQCFKLPLISENPVALINDQLK
                     EFGNANDISKMADDICISSPGFNKVLRNF"
BASE COUNT          745 a          332 c          307 g          794 t
ORIGIN      
        1 gttattgtag gggttggaat ctctttgatg caggtgggtg gatttaatat aattactaca
       61 tatactccaa agaaattctc tgatatttct gttggggtga cttcattgct ttttattgta
      121 ggtatgtcaa taggtccagc aatttctgca tcttttctac aaaatttttt ggttcagata
      181 gaagaaattg ggatatatcc atctttacaa gcatatgatc taatattttt tacagctgtt
      241 atgctgtctt tgatacctct gatgttaata tttttgatta aaaagagaat tattaaacat
      301 gtcaaatcta tttaatttta cattatatcg tcccattaca atgaatataa atccttttgt
      361 ctatctttta attattaaaa taatttttca aaaatttata ccaaaattaa ttggaaaaac
      421 tttaagagac atttacgcaa tactttgtta ttaatgagtc agaaactatt ggaatttgat
      481 tttccaactc tagccgaact aggagatatg ggcaggaaaa atagaattga tgtttttcgt
      541 agatattttg cgaccagtcg ctataataga ttactaattc aaatcgcatt agttcgatca
      601 gcactagata aatcctctat aagatctgtt tcagacttgg aatgtcaaca taatcgagat
      661 tttataagaa tatcgcagat gatgagtcaa cttgattacc ataatgagtt tctagaagca
      721 gttagagagg aagaaactgc attagaaaaa ataatagaag catatgatag aaaaattaat
      781 caaactatgt caggaaaata cagatgatct atattgctct tgttcttcgt acataaatct
      841 attttttgtt actatatatg tattatcatg attgtcagat gatttctgtg tattttttaa
      901 aattacttct gaaataaaaa aaagtagaat aaaaacaata taccaaaaat aagagaacta
      961 gttctaaaat caaagagatt ggatcatgta gatgtataac aatagttacc tacatcctta
     1021 acatttgctt gatagaaaca gaaaaaaccc tttgaaaata ctatcttttc aaatcttcca
     1081 ttttaccaaa ctggaagttt tcttcccttg cagaccaacg aaataattat acagaatacc
     1141 ttcaattctt cattgtagag gattgttcgt atgaccaata attttgtcat ttttcataac
     1201 aatacaacat gcacatttat tctggagaca aatttcagag tcattatggc cacaaattgt
     1261 acatacacat tcagaacctt ttttctttga agtatactta tttttattgt agaaatagta
     1321 ccatgataac atgagagatg aaccaagtaa gagaaacagt acggctacca atattcccga
     1381 ttttagtata aataggatag cactcattga taaagtagct acgccagtta gtaaaggcca
     1441 caatggagtt tgggagttgt tactcattgt tatagtattg atatattttt atatcttatt
     1501 tatatgtagt aacttcctgg tatgatgcag tttctatctc ttcagtatct ttagattgct
     1561 tcttcttcat gcgttttttt ctaacttctt tgaggatttc ctcaatttcc tctttagata
     1621 gtttactgat tcttgaatca cattctagtc ctttagaatc taaaacctct tcagttaaat
     1681 ttaatatctc ttctttattt tcttgttctt cctgtgtcaa caacttataa ctcataaatc
     1741 taaaaaatgc aaaatcactc atttcagata tttattatac gcatatcttg tagttaactc
     1801 tttacccgtt tttaaagtat aaaatacatt ttcgttctac aagttgtaaa agaacaaaaa
     1861 cagttctaac aacgttcgaa acataaattt gatattcata tcaagtaatg aagatgtcta
     1921 atattttggg tttgattttt tattttaaca gcgtttcaaa aattccgtag tactttatta
     1981 aaaccaggtg atgatatgca aatatcatcc gccatcttac taatgtcatt agcatttcca
     2041 aattctttta actgatcgtt aatcaaagca acaggatttt ctgagattag aggtaattta
     2101 aaacactgcc aagaacataa aacactgcca agaactgatg ctctatttga ttgagaaccg
     2161 taccaaaaat ctttctga
//
LOCUS       DATIAS010000676         4608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1757424, whole genome shotgun sequence.
ACCESSION   DATIAS010000676 DATIAS010000000
VERSION     DATIAS010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4608
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1757424"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..1053
                     /locus_tag="VLA74_13670"
     CDS             235..1053
                     /locus_tag="VLA74_13670"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF51803.1"
                     /translation="MKEEELNNNIKMKYLESKEGPISDRHILFIHGLGSSADRWGDIP
                     DALSNYYHTIAVDLIGFGESDKPADVNYTIEKFAEFILEFINKKGLNGDDGKITLVGH
                     SLGGYIAVEFAIRNIKLIEKLVLIDSSGFLKGPTPLLEQYLYAAKYTSYDNVRNVFEQ
                     MVSQPWKVLPAVINTFITRINSPGAKYPFESAYNNSTTTQIDLSRLKSIEDIPTLIIW
                     GNNDNLIPIEYSNPFKQVLKKCKVEIIEDAGHAPFIEKPAFICEILHTFLSQNN"
     gene            complement(1116..1301)
                     /locus_tag="VLA74_13675"
     CDS             complement(1116..1301)
                     /locus_tag="VLA74_13675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51804.1"
                     /translation="MSCATSSGSIVSLIILSIKEVSFSLSSSFFSNDVVVFVSSSLLL
                     NYLLLPYEFVNIKNIIK"
     gene            complement(1611..2327)
                     /locus_tag="VLA74_13680"
     CDS             complement(1611..2327)
                     /locus_tag="VLA74_13680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51805.1"
                     /translation="MNKDLAVLTLEDDDDGYVKPLKNNLQMLPKLDVFVWDFSSINIE
                     QFPHGSPVENGKLSEESILFHWNEEKINNRNNEWNKKPEIKVNVFKFNGIYDLGFSGA
                     PVCFNGDKKVIGIFTAKDSNYGYVIPIQIVLEKLEVEILKDKQILYHSEGFMDSVKEK
                     MDICFDQGVPNIIINEPTYSDGYIDIHKRIQDKGGKIRVITEITKDNIEYCKKMKEIG
                     IDELRHLESITCGLAVRNNT"
     gene            2578..3642
                     /locus_tag="VLA74_13685"
     CDS             2578..3642
                     /locus_tag="VLA74_13685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51806.1"
                     /translation="MKHSEIRGNILIVEKNKYIIIVQQNTYQAIGEEHRKGLIRIFFA
                     LIIAVGFNDFIIFFLFPELINASNIELINASNIFEAKISLPELSFTDVFLPILFNMLF
                     FFVTLFWFLCHWIFYHELIQKYPYYRWRKFFVDIAIFALMFMILSTSYQIYVKDKDGN
                     FKIKNFHLFMLLIISWYILAILWHLSDRKLRTLRWHLRAHYWRLGTFISLFFLSFKWS
                     SSLVYHLLFESFLSYETYEEGVRYVIMVIAMGAIIGYSIKRLTMFIRKNERVSLQCCL
                     FYNNDELIPCLMNYKQQPYEPQSIASDLIIKTSKNLERGYNRRELWNDILNYCSRDLV
                     EYLILYYLQKKNLICLYSSK"
     gene            3621..4145
                     /locus_tag="VLA74_13690"
     CDS             3621..4145
                     /locus_tag="VLA74_13690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51807.1"
                     /translation="MSLLFEIEKRLKEKNIFRVSLSDLQSGSTTGKSNNALLTIGRHE
                     SNIKSEIYPQTDFEKTDSRMIVLKGRYFTVEIKYKKAESFPSSLDFMPNDIDPEIIKQ
                     ILTNNFCANSSNTKVITFTIEFDATVNTLSRIRAFFSFGSARGAEQEIKWLNELQRDF
                     KQFFSIIDFSIIDE"
     gene            complement(4417..4590)
                     /locus_tag="VLA74_13695"
     CDS             complement(4417..4590)
                     /locus_tag="VLA74_13695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51808.1"
                     /translation="MIPPCSLSSLYALTNIEYLLFPSSTSEIFSTARNSFLTILLNTC
                     KSHLLLLFSYPTG"
BASE COUNT         1657 a          661 c          700 g         1590 t
ORIGIN      
        1 gtgtagaaga aggaaagaga agatactcta tgtttgttaa agcatacaat gaagaaagag
       61 aacacatggt ggtatcaatg gtcatacacc atatgaaatg tttcttatga aaggaacaag
      121 attaaataat tccagtaata acaagagagt caagcagata aaaaatgtta accgtattgg
      181 taagtgaatc tgttacctat atatataagt ataataatca aaagctatat ttcaatgaaa
      241 gaagaagaac taaataataa tattaaaatg aaatacttgg aatcaaaaga agggcctatt
      301 tctgatagac acattttatt tatacatggc cttggttcat cggctgatag gtggggagat
      361 attccagatg cactatcaaa ctattatcac acaatagctg ttgatttaat aggctttgga
      421 gaaagtgaca agccagcaga tgttaattat accattgaaa aattcgcaga attcatccta
      481 gaatttatta acaaaaaagg gctaaatggc gatgatggaa aaattacact agtagggcat
      541 tcactagggg gatatatagc tgttgaattt gctataagaa atataaaact gatagaaaag
      601 cttgtgttaa tagattcttc aggatttctg aaaggaccaa ctcctttact agagcaatat
      661 ctttatgctg ctaaatatac atcatatgac aatgtaagga atgtatttga acaaatggtg
      721 tctcagccct ggaaagtctt gcctgcagtg atcaatactt ttataacgag gattaattca
      781 ccaggagcaa aatatccttt tgaatcagct tataataata gcaccactac acagattgac
      841 ttatcaagat taaaatctat cgaagatatt cctacattga tcatatgggg caacaatgat
      901 aacttaatac ctatagaata tagtaaccca ttcaaacaag ttcttaagaa gtgtaaagtt
      961 gagataatag aagatgctgg acatgcaccc tttattgaga aacctgcttt catatgcgaa
     1021 attttgcata catttttatc acaaaataat tgatatgtat gtgatgacta ttgtagaata
     1081 aaatacctta aaaggtcatc atcgccatcc acgtttcatt ttattatatt cttgatatta
     1141 acaaattcat aaggcaacaa aaggtaattt aataataatg atgatgaaac aaatacaaca
     1201 acatcattag agaagaaaga tgacgataat gaaaatgata cttcttttat cgataaaatg
     1261 ataagtgaaa ctatagagcc agaacttgta gcacaactca aaaaagtaaa agaaaatcgt
     1321 atcttttact aatagatgtc atcaataata aatagataag gaaaaagaaa caggaagaat
     1381 gaaaaaaggt gaagagatct atagaaaaga gaaggaacga gctgtattct attactaata
     1441 atttaaattt ggattgaaaa tagattaaaa actattatta caaaagaatg atcaagaata
     1501 ttaaaattta tagaaaaata aaatgtttat aatatagaaa aaatatctac atacagcttc
     1561 tttccaaaaa tccatatctg ttatttcttt aaggattttg ggtgtaaaag ctatgtattg
     1621 tttctcactg ctaatccaca agtgattgat tctaggtgac gaagctcatc tatgccaatc
     1681 tctttcatct ttttacaata ttcaatgtta tctttggtga tttcagtaat tactcttatc
     1741 ttgcctcctt tgtcctgaat tcttttatga atgtctatat aaccatcact ataagtaggt
     1801 tcatttatta ttatatttgg tactccttga tcaaaacaaa tatccatttt ttcttttacg
     1861 ctatccataa aaccctcact atggtaaagt atttgcttat cttttaatat ctcaacttct
     1921 aacttttcta aaactatctg tattggtata acataaccat aattactatc tttggcagta
     1981 aatattccaa ttactttttt atcgccatta aaacagacag gagcaccact aaaacctaaa
     2041 tcatatatac cattaaattt gaacacattg acctttattt ctggtttctt attccattca
     2101 ttgtttctat tattaatttt ttcttcattc caatgaaata aaattgactc ttctgataat
     2161 ttgccatttt ctacaggaga tccgtgtgga aattgttcaa tgtttattga tgaaaaatcc
     2221 catacaaata catctaattt tggaagcatc tgcaaattat tttttagagg ttttacatat
     2281 ccatcatcat catcttctaa cgttagaaca gccagatcct tattcatatc tgaatattct
     2341 tttctccatc tacacaaata ttttctatct tttttctcta taaagatttg atcaagataa
     2401 catatacaat gatggcacat aacaaaatat ttcttttgat ttggataaac ctttttcaaa
     2461 aaataatgtg gattacttga atgttccaca cataacatag gattgtatta tactagctgt
     2521 acttaggtgg attgtaagtg attctactgt atttggtaat tctttgctaa ttagtagatg
     2581 aaacattcag aaataagagg gaatatatta attgtagaaa aaaataaata tatcataatc
     2641 gtgcagcaaa atacttatca agctatcggt gaagaacata ggaaaggact tatccgtatt
     2701 ttctttgctc ttattatcgc tgttggattc aatgatttta tcatattttt tttatttcct
     2761 gagttgatta atgcttctaa tatagagttg attaatgctt ctaatatatt tgaagcaaaa
     2821 atatcattac ctgaattatc attcactgat gtttttctac caatattatt caatatgtta
     2881 tttttctttg taactctttt ctggtttcta tgtcattgga tattttatca tgaattaatt
     2941 caaaagtatc cttattatag atggagaaag ttcttcgtcg atatagctat ttttgcactt
     3001 atgtttatga tattaagtac atcgtatcag atctatgtta aggataagga tggaaatttc
     3061 aaaattaaaa atttccacct ttttatgtta ttaattataa gttggtatat cttagctata
     3121 ttgtggcatt tatcagatag aaaattacgt actttgagat ggcatttacg tgctcattat
     3181 tggagattag gtacttttat atctttattt tttttatctt ttaagtggtc ttcatctcta
     3241 gtatatcatc ttttatttga gtcattttta tcatatgaaa cctatgaaga aggtgtacgt
     3301 tatgttatta tggttatcgc aatgggagca ataataggat acagtataaa aagattgacc
     3361 atgtttatac gtaagaatga aagggtttct ttacaatgtt gtctttttta taataatgat
     3421 gaattaatac cgtgcttgat gaattataaa caacaaccct atgaaccaca atctattgca
     3481 agtgatctaa taattaagac gagtaaaaat ctagaaagag gctataatag aagagaatta
     3541 tggaatgaca tattaaatta ttgctctaga gatctagtag aatatctaat tctatattat
     3601 ctgcagaaaa aaaatttaat atgtctctac tcttcgaaat agaaaaaaga ctcaaggaaa
     3661 aaaatatttt tcgtgttagt ctgtcagact tacaatcagg atcaactact ggaaagagca
     3721 acaatgcact cctgacaatc ggtagacatg aaagtaatat taagtccgag atatatcccc
     3781 agaccgactt tgagaagaca gattcaagaa tgattgttct aaagggaagg tattttactg
     3841 tagaaatcaa gtataaaaaa gcagaatctt ttccgtcatc attagatttc atgccaaatg
     3901 atatcgatcc ggaaataata aaacagatac ttacaaataa tttttgtgct aatagttcaa
     3961 atacaaaagt aattactttt acaatagaat ttgatgctac tgttaatacc ctttcacgta
     4021 tacgtgcttt cttttctttc ggttcagctc gtggtgcgga acaggaaata aagtggttaa
     4081 acgagttgca gagagatttc aagcaattct tttctattat tgatttttct attattgatg
     4141 aataatctaa tacttgtata gttgaagcaa aagataagtc ctagatttat taatttacat
     4201 atttcgtgcg taaaagtttt tgattttgtt atttttactc tttcgcctcc ttttcttttt
     4261 tttatgatac tattccttgc taccaacgag tcgttgtaca aagctgcaaa catctatcag
     4321 atctcttttg atggctcaca tatacagcag cttacacata tccccattca acaagcaaga
     4381 tcttatcaca gaagatagat cacgtatgtt aaggggttag ccagttggat aagagaataa
     4441 tagcagtaaa tgacttttac atgtattcaa caagatagtt aaaaatgagt ttctagcagt
     4501 agaaaatatt tctgatgtag aagaaggaaa gagaagatac tctatgtttg ttaaagcata
     4561 caatgaagaa agagaacatg gtggtatcaa tggtcacaca ccatctga
//
LOCUS       DATIAS010000677         4847 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_668919, whole genome shotgun sequence.
ACCESSION   DATIAS010000677 DATIAS010000000
VERSION     DATIAS010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4847
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_668919"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..140)
                     /locus_tag="VLA74_13700"
     CDS             complement(<1..140)
                     /locus_tag="VLA74_13700"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSF51809.1"
                     /translation="MDLRNKVAIVTGAGGTVGRDITKSLISEGCKVVINGRDVRKLNS
                     LA"
     gene            complement(322..522)
                     /locus_tag="VLA74_13705"
     CDS             complement(322..522)
                     /locus_tag="VLA74_13705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51810.1"
                     /translation="MACKGICIRYKADRPTKGGKRYSIGQKRCQTCDIFIKRDGFWCP
                     CCGYRLRSGPRKKEQKKKNIKI"
     gene            complement(1127..1435)
                     /locus_tag="VLA74_13710"
     CDS             complement(1127..1435)
                     /locus_tag="VLA74_13710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51811.1"
                     /translation="MVNLFGAFAIHNPESCPMNNVEAKKVFLEIKDKLEKNKSKYGVN
                     NIEAFYMSVLEHEWMIILEAENVHDIESLCIDAGLGMFNTVKIVGLKRYDDVHNKIGK
                     "
     gene            complement(1579..2631)
                     /locus_tag="VLA74_13715"
     CDS             complement(1579..2631)
                     /locus_tag="VLA74_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSF51812.1"
                     /translation="MKAAVYHEHNKDPRKVVKIEEIEIPKIKHNQVLIKVEAASYNYN
                     DLWGIWGDPIKIPLPHISGSDIAGTVEDVGENVLDIKRGDRIVGYANLTCGVCGKCTS
                     GKEYDCLQRQVWGFQTGPLWGGFAQYTYLPEVNVIKIPDNVSFEDAAAISMVGLTAWH
                     MLVTRANIQPGQTVLIMGGGSGMGIAGIQIAKLFNCDVIATAGNQEKMDKCLGLGADH
                     VVNHREPEWYKKVRSLTKNREGVDIIFEHIGKSVFPQEVGLLNMGGTLVSTGATTGYD
                     SEIDLRYLFFRGLNLMGATQGTRAGLEEIIKWTSRRKIKAIIDTIYPFEDMVMGHIKM
                     MESQLFGKLLTTPQKL"
     gene            complement(3263..3784)
                     /locus_tag="VLA74_13720"
     CDS             complement(3263..3784)
                     /locus_tag="VLA74_13720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51813.1"
                     /translation="MIIKLIIILALTFVVVTMIAGQIFINSDSVYGATSKSIAKGGLV
                     NIQNDQNGIPTWIIHGIYRMDEMNSTSPMFNATFYMMKLNGSAAHIHTISNFKLIGSP
                     IINNNSTTFNGTATITMENGPITDVPISIKLMSGHAISVWLDPLKIDKHLGNTLIYGS
                     QHLHCVERPQYCK"
BASE COUNT         1616 a          792 c          629 g         1810 t
ORIGIN      
        1 cttgctagac tattgagttt tctgacatca cgcccattaa taactacttt gcaaccttca
       61 gaaattaatg attttgtaat atccctgcct actgttcccc ctgctccggt tacaatagca
      121 actttatttc ttaaatccat agaagataaa taaaaataat aatcgcatca ttttaaatca
      181 ttgctcattt tgaatcgata tttttatagt caagttttag taaatgatcc aaatcaaaca
      241 ttaaagactt tactgaataa tggttaaaca tgctatggct taatgaatcc tctgtattta
      301 ttaagtttga gaattctaat tctatatttt aatatttttc tttttttgct ctttttttct
      361 aggaccactt cttaatcgat atccacaaca aggacaccaa aaaccatccc gtttaatgaa
      421 tatatcacag gtctgacaac gcttttgtcc tatcgaatat cgtttgcctc cttttgtagg
      481 tctgtctgcc ttgtaacgta tacaaattcc tttacaagcc attataatta ttgattaaat
      541 tcttttgttt gaaaccataa taatctatct ttatatgata taactagata aaataaataa
      601 ataaaaaata aattatctaa ttgtcatagc ctgaataaac aataatggtt tattataggc
      661 tatccagact atggcaagat gttaattccc tctaggatta tatttttcct cattgaagta
      721 tttatcactt ttgaaactat tcttctgtga tgttttttag ataacctaga gaaattatta
      781 ttgtcatagc cctctctcta aggataaacc caataataga gactatgaca ttatgaaatt
      841 gcctacttgc ctatagtata ttcatcttgt taaatatagt atataataaa tggagataat
      901 ttaaatgtca taacctctct taagtgttgt tgccagtgat ctacacatat ccaaatattt
      961 tcgttataat ttttacaaat gatattagac gaaatattac aaatatgata gtgacctttc
     1021 tctcgaaagc atttgtaaac agattcatat atcttcaaat cttcaactct aattgaatct
     1081 atattttcaa taatacataa tttacaatga gggtatactc atttcttcat tttccaattt
     1141 tattatgtac atcatcatat ctttttagac ctacaatttt tacagtattg aacataccta
     1201 atcctgcatc tatacataaa ctctctatat cgtgtacatt ttctgcttct aaaattatca
     1261 tccattcgtg ttcaagtaca gacatataga atgcttcaat attgtttact ccatattttg
     1321 acttattttt ttctaattta tctttgattt caagaaatac ttttttagcc tccacattgt
     1381 tcataggaca agattcagga ttgtgtatag caaaggcacc aaagagattt accataatat
     1441 gtttataaag aaatagagat attaagtcat acgatttata atcaaatatt ctttagtaaa
     1501 ttgcatcttt cacaacatat caatcatttc tattatatca attgttatca ttctttaaaa
     1561 aaattttaaa tatgctaatt acaacttttg tggagtggta agtaactttc caaataattg
     1621 tgattccatc atttttatgt gacccattac catatcttca aaaggataaa tcgtatctat
     1681 tattgctttt atctttcttc tacttgtcca tttgattatc tcttctaatc cagcacgtgt
     1741 tccttgagta gctcccataa gatttagtcc tctaaagaag agatacctca aatctatttc
     1801 ggaatcatat cctgttgttg ctccagtaga cactaaagta cctcccatat ttaatagacc
     1861 aacttcttgt ggaaataccg attttccaat atgttcaaaa ataatatcta cgccttctcg
     1921 attctttgtt aaacttctaa ccttcttgta ccattcaggc tctctatgat ttacaacatg
     1981 atcagcacct aatccaagac atttatccat tttttcttgg ttgcctgctg ttgcaataac
     2041 atcacaattg aataactttg caatctgaat acctgctatt cccataccac ttccacctcc
     2101 cataatcaaa acagtttgtc caggttgaat attagctcta gtaactaaca tgtgccatgc
     2161 tgtcaatcca accatagaga ttgcggctgc atcttcaaaa gaaacattat ctgggatttt
     2221 tataacattg acttctggta aatatgtata ttgagcaaat cctccccata aaggaccagt
     2281 ttgaaaaccc catacttgtc tttgaagaca atcatattct tttccagaag tacactttcc
     2341 acatactcca caagttagat tggcatagcc aactattcta tctcctcttt ttatatctaa
     2401 aacattttct ccaacatctt ctactgttcc cgcaatgtca cttccagaaa tatgaggaag
     2461 aggaattttg attgggtctc cccatattcc ccaaagatca ttgtaattat aagatgctgc
     2521 ttcaactttt ataagaactt gattatgctt aattttagga atctctattt cttctatttt
     2581 tacaactttt cgtggatctt tattatgttc atgatatacg gctgccttca tttcactata
     2641 aaaaaataca atatttattt aaaaatattt ttgaaataat ggtgaataaa ttggaaaagt
     2701 acaatcataa aatgtattgt tacaaagaaa taagaaaatt caatagtaca atacattgta
     2761 tgaattggac tcatgacaat gctctgcctt ctcagtagaa taatctagat attctataaa
     2821 atggctaaag atacatggaa attaagaaaa ttaacagaag taaaatctac tcttactatg
     2881 atagtaatgg aataaggttt tacaaagtat ttttatcttt atgattattt attaaatatt
     2941 acttctcgaa agcagatatg attacctgta atttaatata aatgataatt taatatgaat
     3001 taataaataa tttttttatt ttttaataaa tctttttttt aaactaatct agtaaattaa
     3061 tagcagattc tgtcagtctt ttatttttat tcgttacaat ctctattatt atgtttccta
     3121 aattgcaaac aataaacaaa agtttatgat ataataacaa gaaagtcata tctatctttg
     3181 gaaaataatt gtaatccgat tcttgtatat ttatagatag aatattatta agttaggtta
     3241 cgctgcagca agcaagtatt acttacttgc agtactgcgg tctttcgaca caatgcaggt
     3301 gctgtgaacc atatatcaag gtgttaccca aatgcttatc aatttttaat gggtcaagcc
     3361 atacactaat agcatgtcca ctcatcaatt ttatgcttat tggaacatcg gttataggac
     3421 cgttctccat ggttatagtt gctgttccat tgaacgtagt agaattgttg ttgattatgg
     3481 gactaccaat cagtttaaag tttgatattg tatggatatg ggctgccgat ccatttaatt
     3541 tcatcatata aaatgttgca ttgaacatag gagaagtaga attcatttca tccattctat
     3601 aaatgccatg aatgatccaa gtaggaatac cattttgatc attctgaata tttaccaagc
     3661 cgccctttgc tatactttta gaggttgcac catatacaga gtcactgtta atgaagatct
     3721 gtccggctat catagtaaca acaacaaatg tcaaggctag tataattatg agttttatta
     3781 tcattaatca taagacacaa actagatata tatataaata aattcttcaa tttcccatct
     3841 gtagcagtaa tttaagaaat ctatagattt gctttttttt ctttttcttt attttcttct
     3901 ataggagtag aatttagttt aatgatatct gttgttgatt ggtgtttgtt agaatcctgc
     3961 tgttgttgtt gttgttggta ttattcctac tgttgctaca attaaaaaag caaatacaag
     4021 aatagatgac gaaattgcta ttgttaaata aatatttgat tccatatcat tttttttagt
     4081 aatataaaat atataataat tgaatctaca aacttaaaat taataattta attgccatag
     4141 cctactattc taggggcaaa ctggtataac agttagacag cagactatgg ctataggcgc
     4201 aattagacga attttttctg gttataatta ataaatcaac aaattattta gcaatttaaa
     4261 ataaatttgt caccttatct tattaaaagc catagccttc caattggcta ataatcaaat
     4321 aatattattt gattttttat cgggaggctg tggtgttgtt gactgaatat ggattcttca
     4381 gcattatata atacgctatc aaaatattta aaattttttt tatattatat tatacctgca
     4441 atctaatatc atctaaaact atatcatctg atgatttaag aaatttattg gtaaaaggaa
     4501 aagccatagc cctctttcta atgataatca caacaataga gatgaggcta tgacagtgtg
     4561 aatcggttaa gtctttcttt ggacttaaat cattggactt gacgatagga ttgagagtgc
     4621 ataaaactgt taaatatact atataatgat tgaagacaaa ttaattaatt gtcatagcct
     4681 ggacaacaat atgactcgct agagatatgc ccagaccatg acaaggtgac aattattttt
     4741 gaggtagcgt agatcttata ctatatagta gatcttttgc ataattagaa agattacagc
     4801 tatattcctc ttttttagca gttatttcgt agatttgcta aattatg
//
LOCUS       DATIAS010000678         2070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2032313, whole genome shotgun sequence.
ACCESSION   DATIAS010000678 DATIAS010000000
VERSION     DATIAS010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2032313"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            527..1102
                     /locus_tag="VLA74_13725"
     CDS             527..1102
                     /locus_tag="VLA74_13725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51814.1"
                     /translation="MKQMIGLMGVSLTLMIGIMTVMDYSFETAYSQVEPEKEKSLQEQ
                     VATSFNYVHKADLNRASVTLLLNGISLIQNDTLLIYDSTPFATKGHISLNLPCNPEES
                     NKPMFQVLIGLAPKVFPMYLGYLEQVSNPPRSCLFHGQFGFGDPVTDVALKYTESEEV
                     HFLGPHTITITAHESYIPSQELFKQKQHLAP"
BASE COUNT          709 a          310 c          295 g          756 t
ORIGIN      
        1 aaaccattta ttccattctc aaagtacctg tttatccact tgtagtatct ccttctagat
       61 attaggtatc tactgcatta cttacagtac cttcagtcta cgctttctga tgaattggat
      121 aaaatttgtt tgtaattcta ttttgtatac acttactaac agactagaag gtgttaccta
      181 tgttagtaaa tgaaattgta accatctata aaagtacaac aaggaattat tatttttaaa
      241 aaatttatag tagcttaaaa tgtatataga aataaacatg atattgaact ggatatcgac
      301 gattaaactt gtaattatag taagaatact gaagaaagat gaataaaatt ttacaggtaa
      361 acgattagag cttgattttg attaactagc tcaaattatc gaaatttact cgataatcag
      421 aattatactc aaataactta acaatctcga actattaatt gattaattta ttgttagtgc
      481 ctattgatag aattctatat taataactaa attattacaa taatttatga agcagatgat
      541 aggattaatg ggtgtttcac taactttaat gattggaata atgactgtta tggattattc
      601 atttgagaca gcttattctc aggttgagcc agagaaagaa aaatcattac aagaacaggt
      661 agccaccagt tttaattatg tgcataaggc agaccttaat agagcatctg taactctatt
      721 actaaatggc atcagtctta ttcaaaatga tacattacta atatatgatt caactccttt
      781 tgcaaccaaa ggacatatat ctcttaattt accatgtaac ccagaagaat ctaataaacc
      841 gatgtttcaa gtactaatcg gtcttgctcc caaggttttt cccatgtacc tgggatattt
      901 agaacaagtt tcaaacccac ctagaagttg tttatttcat ggacaatttg gatttggaga
      961 tcctgtaaca gatgtggctc ttaaatacac agaaagtgaa gaggttcatt ttctaggtcc
     1021 acatactatt actataactg cacatgaatc atacattcca agtcaagagc tcttcaaaca
     1081 aaagcaacat ttagctcctt aattttttta tttttaattt ccatgatgat atgcgtaaaa
     1141 agcaacttaa attttatata tttttgaaat gaggataaaa atacttagtt acatttccat
     1201 tagaaagtaa ccgttagatt ttttatttcc ttgcacacaa attcttttgt tataatcaat
     1261 aatggccaac aggtttttga taaataaatc caatttgaag aaaagtcgcc ctaacttttt
     1321 aataataaat caatttaagt gctttccaat tttttattaa tgataaattc aatggaacac
     1381 aaataattat taagaaatgg gaacaggttc agaattttta cattaggatt tggctttatt
     1441 ttccaatctt tctaggtagt gtatgaaaat taacgatttt acttgtcatg gtattgatat
     1501 acgcgaataa ttgatcccag atttatcttc cttttgtata agggttaaca tggcttttat
     1561 taataatcga tttgttgtga tgtctggaat gttgttaatt tgagattcaa ttaattttga
     1621 gaatcgaatc aaccgtcttt gtctttgtct ttttctttat atttggaatt tttgtttata
     1681 tctaatacat tttcagctat atttttcatc aaacaccaat taaaaaccgt atatatatca
     1741 aaaggtgtgc ctttctatca ccttaccata gtaccagtat agttagaaat atagaccgac
     1801 aattactcta agatttttta caaaatatca taggtatgag gaaatgtcaa agaaatgtac
     1861 ttttttcgta gtttttaaaa ttattttacc ttgtttaagg tgacagtaaa acaagagaag
     1921 ttaatcataa caggattttc tatattttca cctacttaac tcttaaaata tcgtgacgtt
     1981 tgcagtgtag cttccgtagt tcattgtagt agagtcttat gacgtctcac cccatggtct
     2041 accaaaccta gatgcctctg atacatgttt
//
LOCUS       DATIAS010000679         3403 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1485970, whole genome shotgun sequence.
ACCESSION   DATIAS010000679 DATIAS010000000
VERSION     DATIAS010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1485970"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..472)
                     /locus_tag="VLA74_13730"
     CDS             complement(83..472)
                     /locus_tag="VLA74_13730"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF51815.1"
                     /translation="MYSFYLYFLGLSLRNTSKALDIFDDEKRSHIAIWNWIQRFGSCY
                     IYKRKRVSAFIIDETIIQIGNQHFWLWICIEPIHKSVLGIHISEERNMFVAENFIRSL
                     VDKYGKHMVYTTLLRNFLFLTHLANLF"
     gene            751..2064
                     /locus_tag="VLA74_13735"
     CDS             751..2064
                     /locus_tag="VLA74_13735"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSF51816.1"
                     /translation="MNNNKQQYFRTSKLRKQLLSFFYMMSFVISIISAISTTKAMAEI
                     ATAIDLPVAENISSSISSILLSSINKQKVIQSEKPVNFEITNDLKNLIRTLVDNGTNA
                     AIVIGLVDPSGTQFYGYGKTSNTTNTTVVNKDTIFDIGSITKTFTTTLLADMANEGIL
                     NLEDPIENYLPSSVKVPMYYGQRITLEDLATHTSGLPENPPNLHISNITSYSNYTREQ
                     LYQALSNVTLKTAPGTHFEYSNMGIAILGDILASKMGIPYEKLVKNRILNVLGMNSTV
                     INLSDLLISRLALGHGNGIEIPITSIDLVVPPPLAPAGSLRSSAADMIKYLSANMDLI
                     KTKLNDAMENAQMIRSYANLSGIVPYDIYIGLGWITTTNFGSQIIWHNGEVVGYNSLA
                     AFNPTTQKGIVILCSSMSQDIDVANIGFGPHDELSNTIWNLLLSN"
     gene            complement(2523..2651)
                     /locus_tag="VLA74_13740"
     CDS             complement(2523..2651)
                     /locus_tag="VLA74_13740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51817.1"
                     /translation="MPSLLSSNVGDGDGGGHSSCLCSAASSPCATHFQILLVFRQL"
BASE COUNT         1279 a          528 c          451 g         1145 t
ORIGIN      
        1 ctacaacatc aaaatcaagt aatacttcac ctctttttac tagagactcg ttgtaatttc
       61 tccagttcat catataatat gactagaata ggttagctaa atgtgttagg aagaggaaat
      121 tacgcaacaa agtagtataa accatatgtt tgccatattt gtcaaccaaa gatctaatga
      181 aattctctgc tacaaacata tttctttctt cagaaatgtg tattccaagc acagatttat
      241 gaattggttc aatacaaatc cataaccaaa agtgttgatt tccaatctga ataattgttt
      301 catctatgat gaatgctgaa actcttttcc ttttgtaaat ataacatgaa ccaaaccttt
      361 gtatccaatt ccatatagca atatgacttc gtttctcatc atcgaatata tctaatgcct
      421 tagatgtatt tcgtaaacta agaccaagaa aatacaaata aaaagagtac ataactacaa
      481 tagtggatgt tctgttcctg acaaatccta gtaacataca agtcagaata ggacattcac
      541 agctaaatcc attctgttaa attaacagca ctcattaggc gattatattg aatctattcc
      601 tctatctaaa ttattgcatt aatagttcag ataatatatt tcaatattag gatcataatc
      661 atctcacata gactgcaatt gtgagaataa tctttgtgta gatagaatat ataaagaaat
      721 aatatctgtt ttcttaatag taaaataaat ttgaataata ataaacaaca atattttaga
      781 acttcgaaat taagaaaaca attattatca tttttttata tgatgtcttt tgtaatatct
      841 ataatatctg ccataagtac gacaaaagca atggcagaaa tagcaaccgc aatcgattta
      901 ccagtggcag aaaatatttc atcatccatt tcttctatat tactatcgtc tataaataaa
      961 caaaaagtaa ttcaatcaga gaagccagtc aactttgaga taacaaatga tctaaaaaat
     1021 ttaattagaa ctctagtaga taatggtacg aatgcagcaa ttgtaatagg acttgttgat
     1081 cccagtggaa cacaattcta tggatatggt aaaacatcta atacaactaa tactacagta
     1141 gtaaacaaag atacaatttt tgatattggt tctataacta aaacatttac tacaactctt
     1201 ttggctgata tggcaaatga aggaatactc aacttagaag atccaattga aaactacctt
     1261 ccatcttcag ttaaagtacc gatgtattat ggacaaagga ttaccctaga agatttagct
     1321 actcatactt ctggattacc tgaaaatcct cctaatttac atataagcaa tatcacaagc
     1381 tattcaaatt atacacgtga gcaactttat caagccttat ctaatgttac cttgaaaaca
     1441 gctcctggta cacattttga atattctaat atgggtatag ctatactagg tgatatttta
     1501 gcctcaaaaa tgggcattcc atatgaaaaa cttgtaaaaa atagaatttt aaatgtttta
     1561 gggatgaaca gtacagtgat taatctttcc gatctattga tctctcgtct agcattagga
     1621 catggtaatg gtatagaaat tcctatcact tctatagatc ttgtagttcc tcctccgctt
     1681 gctccagcag gttcacttcg ttcctctgct gcagacatga taaagtatct gtctgctaat
     1741 atggatttaa ttaaaaccaa attaaacgat gcaatggaaa atgcgcaaat gataagatca
     1801 tatgctaatt tgagtggcat tgtaccttat gatatctata ttggactagg atggattaca
     1861 accactaatt tcggttccca aattatttgg cataatggtg aagttgttgg atataatagt
     1921 ctagctgctt ttaatccaac tactcaaaaa ggaattgtta tactttgtag tagtatgagt
     1981 caagatattg atgtagcaaa tattggtttt ggtcctcatg atgaactttc aaatactata
     2041 tggaatctat tgctatcaaa ttaactaagt aacttaattt tgagttttat atcaatataa
     2101 tcaattgctg atcaaggatc actgaaatat gtttctttgt tattcctttc tttataaaca
     2161 tcttttattt ttaattttca atgtttatga ttacttcatt cttacaaata tataatttta
     2221 tttcttaata gtacaattct aatttattga ttaagtttaa aaatatataa aactaatatc
     2281 gtataacaat aaattaatat atattatgtt accgaaccct gtcataatga gaactcgaag
     2341 cctaccgagc ccgtatacta gtagggttca ataacatttt caagatttaa ctcaaaaata
     2401 acgcaaatat aagagacttg ctattgaaat ttgaaaaaat agatattaaa taatttaata
     2461 aactaaaagt agtatgaatt cgaaattgaa ttcaatagta attacgtatt ttattgtatt
     2521 tgctataatt gtcggaatac caacaatatt tgaaaatgtg ttgcacaagg agaagaggcg
     2581 gcagagcaaa gacaggatga atgaccacca ccatcaccat caccaacatt agatgataat
     2641 aacgatggca tgattattag tgaagaaatt tgtcctccat attgtagccc acctcctccg
     2701 atacaagagt taccacaaga gcaaccacca taaacaacaa tacaagatca tcaacttaat
     2761 aataataata aagaaggatc taagaatatt aataacatca acaatgacaa tcaagaaaaa
     2821 ggagtactag attagataat taatcttctt ataataataa taataataat aatcaagacg
     2881 ataggaaatt ttaacaaaca gcaatctaaa aatcatatag gtcctttaag atattattga
     2941 aattgtttaa tatattttaa aagacttaat gttagcaaat tagtttcttc tatagtttct
     3001 atatatctta aatattgatt caaaatgata ttagaagtaa ttcaagagaa agaaaatata
     3061 ggttgtattg ttttggtgat tcttattcag taaagtcaaa cagacattat gaaaaaaatt
     3121 tattatttgc aataattgaa tcacaataag aataagaatt ttctgtttat tttattaaaa
     3181 aattgaattt atactttaac gttacactac gacaaatcat tgattctaac ttactgttat
     3241 tatattattc taacaactac tatcttttct agcacatacc caattaagca tacctaaatc
     3301 tttaagcatt cttttttcac aatcggaatt ttgatctggg aattcatcag acgtaacaca
     3361 tccaaagaat aaatctcctg gttgaattaa ccctacttct gtt
//
LOCUS       DATIAS010000680         2957 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_124413, whole genome shotgun sequence.
ACCESSION   DATIAS010000680 DATIAS010000000
VERSION     DATIAS010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124413"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            497..826
                     /locus_tag="VLA74_13745"
     CDS             497..826
                     /locus_tag="VLA74_13745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51818.1"
                     /translation="MSYKTINPLHQDIGKTIASEKFLNTMDSFWFVLKPNVIINSFDF
                     VTVDNLFDSKSIGIVKELQAIAAAAEHDYYNNYFSDNHTISKNRKEQLKQKVEEKEEY
                     EQLSRGN"
     gene            835..1395
                     /locus_tag="VLA74_13750"
     CDS             835..1395
                     /locus_tag="VLA74_13750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51819.1"
                     /translation="MLAKVAIMANKGVKAQGYKEDTSINFPVGVGKTVRFATEEEILF
                     ALGIPQMVNPIPAGIIETTNGLQVPITLDISYLAGADTAHVNASGISGNRKRSYILFL
                     LQSAYQTLKRMNQNVALIIFNTKERDLLYIDQKEKYIKKRTERLFDVLDLDIEPFENV
                     TSFQEEKMVNLIQFIYQRTFKHILMN"
     gene            1635..2255
                     /locus_tag="VLA74_13755"
     CDS             1635..2255
                     /locus_tag="VLA74_13755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51820.1"
                     /translation="MFIDKKKTSAYLGKEIKKIKAGEVFVIDVATISSFEEQAFVVGD
                     VMKSIDEMYSSRYYNLEDDNTNNTITDSDKNIVQNDQKKLHYILVFVDEINRFIPKSQ
                     NGKMNSVSEQIMRTVIAGKTRGTILFSAQQFKSATDYRLQENTDLHITAKLGLSELST
                     EPYSMLDESTELNIVRLNKGELVMIHPAFRHPIKIGFPKATYKEPK"
     gene            2346..2630
                     /locus_tag="VLA74_13760"
     CDS             2346..2630
                     /locus_tag="VLA74_13760"
                     /inference="COORDINATES: protein motif:HMM:NF015069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET family transporter"
                     /protein_id="HSF51821.1"
                     /translation="MVDFLWPNIGFMATTFAVSSTVPQIRKALRTKKSDDVSIRFIVV
                     LIIGLSLWVIYEIGRNDIVLIIGNSIAVALNTFMLFLNIKYSRNPLDEES"
BASE COUNT         1168 a          401 c          435 g          953 t
ORIGIN      
        1 tttttaaagg ttctgtttgg agttctttgg actgaaaaaa ccagactgga ggacatgtag
       61 ctcatgagcc tcactgaacc tactgtttga cttgtttttc ctcttttaca aataaattat
      121 ctccaatttt taaatatttt attacaaata atttattaga aacataaaca aaaaactagc
      181 ctaatcaaat gtcatagccc cacctaccaa ccagttgtac tcaataagct attgcatgtt
      241 aaaaattatt tctcattatt attaatttaa tattattgag atatttatac tacttctata
      301 attacaatgt aaaattatcc taagaaaaat agactatgag aaagagaaga acatctatga
      361 gcagcaacaa aaaaccataa ggagatataa taggaaatca gaaagatttg aagaccaatg
      421 ctgcaaaaac tctataggtt aaaatgtcta tctatattat caaagatatt tatcttttat
      481 acaatattta taactaatgt catacaagac aataaatcct ttacatcagg atattggaaa
      541 aactattgct tctgagaagt ttcttaatac aatggatagt ttttggtttg ttctaaaacc
      601 taatgtaatc ataaactcat ttgactttgt tacagtagat aatttgtttg atagtaagtc
      661 tattggaatt gtaaaagaac tacaagcaat tgctgctgct gctgagcatg attattataa
      721 taattatttc tctgataacc atacaatatc aaaaaataga aaagaacaat tgaagcaaaa
      781 agtagaagaa aaagaagaat atgaacaact ttcaagaggc aattaaagag agttgtgtta
      841 gcaaaagtgg caataatggc aaataaagga gtgaaagcac aaggatataa agaggataca
      901 tccataaatt ttccagtagg agtaggtaaa acggttagat ttgctactga agaggaaata
      961 ttgtttgctt taggaatccc tcaaatggta aatccaatac cagcaggcat catagaaaca
     1021 acaaatggcc tccaagttcc tattacattg gatatatctt atttggcagg ggcagataca
     1081 gcacatgtaa atgcttcagg aatatcagga aacagaaaaa gatcctatat cttattcttg
     1141 ttgcaatcag catatcaaac acttaaaaga atgaatcaaa atgttgcatt gataatattt
     1201 aacacaaaag aacgggactt gctatatata gaccaaaaag aaaaatatat caaaaaaaga
     1261 accgaaagac tatttgatgt actagattta gatatagaac catttgagaa tgtaacttcc
     1321 ttccaagagg aaaagatggt aaacctaatt caattcatat accaaagaac ttttaaacat
     1381 attcttatga actaatagac gtttacgata gacttgaact gttattttct gaaccttatg
     1441 atttacatca tgatttttca tcaataataa attacatttc tgaatcgtgg cctctaaaga
     1501 gtaataatgg aaagaaggat atatgtacat ggactgacct tactgaattt agagaatatc
     1561 ctgaagcaat attatcaaac aaatcttctc ttttgtcttt tttaggcaga ttacaaagat
     1621 ttaggaaatc tcccatgttt attgataaaa agaaaactag cgcctatctt ggtaaagaaa
     1681 ttaaaaaaat caaagcagga gaagtctttg taatagatgt ggcaacaata tcttcttttg
     1741 aagagcaagc ctttgttgtt ggggatgtaa tgaaaagtat tgatgagatg tattcttcaa
     1801 gatactataa tcttgaagat gataatacta ataataccat tacagatagc gataagaata
     1861 tagtccaaaa tgaccagaaa aagctacatt atattttagt ctttgttgat gaaattaata
     1921 gatttatacc taaatctcaa aatggaaaaa tgaattcagt gtcagaacaa ataatgagaa
     1981 cagttattgc aggaaaaaca agaggaacta tcttattttc tgcacagcaa ttcaaaagtg
     2041 ctacagatta tagattacaa gaaaatactg atttacatat tacagcaaag ctaggattat
     2101 cagaattatc tactgaacct tattcaatgc ttgatgaaag tacagaactg aatatagtta
     2161 gactaaataa aggagaattg gttatgattc atccagcatt cagacatcca ataaaaattg
     2221 gatttcctaa agctacatat aaagaaccaa agtaaaatat ttgttttata agtatcatcg
     2281 tatagatttc ttgaaactta tatcatactt gtttctataa taatagtaaa ataattgaaa
     2341 ttcacatggt agattttcta tggcctaata ttggttttat ggctacaact tttgcagtgt
     2401 ccagtacagt tcctcaaata agaaaagcat taaggacaaa aaagtcagat gatgtatcga
     2461 tacggtttat agtagttttg attattggtc tttctctatg ggttatttat gaaataggaa
     2521 gaaatgatat tgtattaatt ataggtaatt ctatagcagt agcattgaat acatttatgc
     2581 tatttctaaa cataaagtac tctagaaatc cattagatga agagagttag cttcattaaa
     2641 tattactaat attactttaa cattagatta tcaactttta aggattcata tatgattttt
     2701 ctttaaagca attgtaacat ctagtaataa aaaatagaca atataagtta gttttattat
     2761 tatgattaaa acaatttaaa ataagtttta ataataaaag ctaaatacaa cataatagta
     2821 tttctaaatt agactcttat tttagcaccg ctatcggtat tactccctcc tgtaaattgc
     2881 taacaaattc atatatcaat cttccaaaaa cattttataa aataagttct aataattaaa
     2941 gctaatacaa tatagtg
//
LOCUS       DATIAS010000681         2821 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1349714, whole genome shotgun sequence.
ACCESSION   DATIAS010000681 DATIAS010000000
VERSION     DATIAS010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1349714"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..385)
                     /locus_tag="VLA74_13765"
     CDS             complement(173..385)
                     /locus_tag="VLA74_13765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51822.1"
                     /translation="MDQGSIEDINDYINDPNKFQILDSNCMLEEKEEEREGREERTIR
                     VLSIDEFNVKYTDISSTSIDNQRSKN"
     gene            complement(404..895)
                     /locus_tag="VLA74_13770"
     CDS             complement(404..895)
                     /locus_tag="VLA74_13770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51823.1"
                     /translation="MHEIQYRLLKGEKDKDIMRAVLLSERNYYKYKKKISVYLEQIQK
                     ERTDSAIWLEVQTLKDRMSNLYRTLHDRIHHPHTKTSDLPNLVSTAESIAINILKLEV
                     ASITAIQQSNVLESHVNTQLPSSSKYKELPKINYNNREETNDFYEENNINENKNKEII
                     YND"
     gene            1342..2178
                     /locus_tag="VLA74_13775"
     CDS             1342..2178
                     /locus_tag="VLA74_13775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51824.1"
                     /translation="MVDKQTGIFSALLFFGIAALFFPATALENAVANAQEEEYSRDYI
                     EEEARDGYYTIDNEESYYSYEDNKKKDPIVVIKKKLFMCNNVETTGFFFDCFTQFENA
                     AGPNSGEYTPCTEDLCPGIDESEFAVQIFKDVATVSDLNPQGTLVNLDKFHYSVTENR
                     LNDLITDESTLCFPTGFRHFLFYEKETEDNFVQFNICVNYVGDCDGTIYPGQIKTCTV
                     ENYIVAGVIRELQTGNAIDSAITGTTTLNTTTNPTIQSSNIAGVPNSVPLNSLPSGLV
                     TN"
BASE COUNT          915 a          409 c          400 g         1097 t
ORIGIN      
        1 gatgtagtta aagtaaacac atcttaatta ggtgttatcc agctttaagc ttgactgaaa
       61 catttgtcaa taagagcgat tcataatctt ttagatccct ccttttgtag atatcgatta
      121 gatcgattat gtctagaatc gatattattg gactcctttt ggtaaacggg gctcaattct
      181 tgctcctttg gttatcgatt gaggtagacg atatatcagt atattttaca ttgaattcgt
      241 ctatacttaa aactctaatt gttctttctt ctcgtccttc tctttcttct tccttctctt
      301 caagcataca attactatct agtatctgga atttgttagg atcattgata taatcattaa
      361 tatcctctat actcccttgg tccaatcgat atcttactaa aagttaatca ttgtaaatga
      421 tttctttatt tttattttca ttaatgttat tttcttcata gaaatcattt gtttcttctc
      481 tattattata atttattttt ggaagttctt tgtatttgga acttgaaggt agttgtgtat
      541 ttacatgact ttctaaaaca tttgattgct gtatagcagt aatacttgct acttcaagtt
      601 tcaaaatatt tatcgctatt gattcggctg tagatactag attgggcaaa tcacttgttt
      661 tagtgtgggg atgatgaatt ctatcatgca atgtacgata taaatttgac attcgatctt
      721 taagagtttg gacttctaac catatggcgc tatcagttct ttctttctgt atttgttcta
      781 aatacactga tatctttttc ttgtatttgt aatagtttct ctctgacaac agtacagcgc
      841 gcataatatc tttgtccttt tctcccttga gaagtctata ttgtatctca tgcattcgcc
      901 attttatata tgatctgttt gctctttttt gctctttttg aatgtttgag ggcactaaca
      961 aaactgacct atattgaact aaaataacct aaaaatatta tgttattaat attcatatcc
     1021 attaataata tttctaattt atttatatgc aattgaatat gtattaatat ataattttaa
     1081 gattttaaaa ttttatatcg attgaattca attcttcttt tatacatata tccatgttgt
     1141 taaaaatttt ggaatagcgt tgtacaaatc agatcttttt gatatatgat aatattgata
     1201 tattattaat tataatataa aaaataatac atatatattg atataagata ttttgatttt
     1261 ctttttctta agatttgctg ttaatattaa aagagattac ttctacttta ctcataaatc
     1321 caatcgtagg tttatatcct catggtagac aaacaaacag gaatcttcag tgcactttta
     1381 ttttttggga tagcagcact gtttttccca gcaaccgcat tggaaaatgc agttgctaat
     1441 gcacaagaag aagaatatag tcgagattat atagaagaag aagcaagaga tggatactac
     1501 actattgaca acgaggaaag ttattactca tatgaagata ataaaaagaa agaccctatt
     1561 gtggttataa agaaaaagtt gttcatgtgt aataatgtag agacaaccgg tttctttttc
     1621 gattgtttta cacaatttga gaatgcagca ggacctaata gtggtgaata tacaccatgt
     1681 actgaagact tatgtccagg tatagatgaa tcagaatttg ctgttcagat ctttaaagat
     1741 gttgcaactg tatccgatct aaaccctcaa ggtactttag taaatctcga caagttccat
     1801 tattcggtaa cagaaaatag attaaacgat ctaataacag atgaaagtac tttatgtttt
     1861 cctaccggct ttagacattt cttattttat gaaaaagaaa cagaagataa cttcgttcag
     1921 tttaatatat gtgtgaatta tgtaggagat tgtgatggga ctatatatcc tggtcaaata
     1981 aagacatgta cggtagagaa ttatattgtt gcgggagtta tacgagaatt acaaacgggg
     2041 aatgctattg atagtgcaat aacaggaact acgactctaa atactactac taatcccact
     2101 atccaatcaa gtaatatagc aggagtgcct aattccgtcc ctctcaattc ccttccttct
     2161 ggtttagtga caaactagca aaccaaaaaa aatacctttt tttctttatt tttttagttc
     2221 ttctatctat tcaatcaaat aaaatatatt aaaataaaat attttgttgt tattgttatt
     2281 tttgcattat tacattggta gtttcgtagt atgcatttgt aagataaaat acccgttaat
     2341 ttcttctgga actttattct gaaaaatatt ctgtagaata aagtcataat agttgttatg
     2401 tttaataaaa ataaaattat tattcactat agtgattctc ctttctgttt tcctttattt
     2461 tataaaagta aaaaatacaa atccttgtaa tctgttttca atatatatat gctcataggt
     2521 ggtatttgtt tttttgtatg ctgtaacaag tgcagagttt acaatagatc ttgtattaaa
     2581 atcaagtttc cttaacaaat tacatttttg caaccattca ttaattatct gataagattc
     2641 ttcaaaagat aattttttga taacaaccaa ataaggtgct aaaatcaaat ctttttatta
     2701 ttatattatt ttattatttt attattatga cctatgacta aaactggaat taatcactca
     2761 gtgtactgga atccacagtt tgaatcgcta caacctttta tagagtacaa aaaacaatat
     2821 c
//
LOCUS       DATIAS010000682         2453 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_669815, whole genome shotgun sequence.
ACCESSION   DATIAS010000682 DATIAS010000000
VERSION     DATIAS010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669815"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VLA74_13780"
     CDS             complement(<1..260)
                     /locus_tag="VLA74_13780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51825.1"
                     /translation="MVVDDELDICLMLKVVLENNGFIVDYYNNPILALDEFKSTFYDL
                     IILDIQMQDINGFHLYREIKKRDIQSKICFLTASENLFDITY"
     gene            complement(1169..1705)
                     /locus_tag="VLA74_13785"
     CDS             complement(1169..1705)
                     /locus_tag="VLA74_13785"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51826.1"
                     /translation="MLDNLKDEFTVISLDESFFFFDSLVRKVWIRKDERPVVRITGSH
                     QESVLFGTTSLEGKQLFRQYDWFDENTFLDYLKQIHRKFPKCYLFLDKAKQHYKSKKV
                     LEYFAYNKDSLIPVYLPTASPEFMVFEEVWNIAKNDLLVLQYYSSFTDFKNKISTYFR
                     TKRFNLNMRNYLLAKIDN"
     gene            complement(1690..1887)
                     /locus_tag="VLA74_13790"
     CDS             complement(1690..1887)
                     /locus_tag="VLA74_13790"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSF51827.1"
                     /translation="MDYKTGRRSDCQKKSGGIRYHYTHIYRLMHKWGFKQKVPRKVHV
                     NTASKEEKERFKKEQERYWII"
     gene            1894..2061
                     /locus_tag="VLA74_13795"
     CDS             1894..2061
                     /locus_tag="VLA74_13795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51828.1"
                     /translation="MLDANSFFISCTFSSGISGCLPLFGLSFNPSIPSSLYLFNQYNP
                     HGLLLCSSSAA"
     gene            2244..>2453
                     /locus_tag="VLA74_13800"
     CDS             2244..>2453
                     /locus_tag="VLA74_13800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51829.1"
                     /translation="MIRKYMLIGIVLFFILKELDKKPYSLEIDAIKDKTDISGTFYRV
                     KVTNTGTNPLTGLKVNLGKGDIQNMD"
BASE COUNT          825 a          368 c          311 g          949 t
ORIGIN      
        1 ttgtatgtaa tatcaaatag gttttcactt gctgtcagaa aacatatttt tgactggata
       61 tccctttttt ttatttctct gtatagatga aacccattga tatcttgcat ttgtatatct
      121 agtattatta aatcatagaa agtagatttg aattcatcga gtgctaaaat ggggttatta
      181 taataatcta ctatgaatcc gttattttct aaaactacct ttagcattag acaaatatct
      241 aattcatcat caactaccaa tattcttttt ttattatcta aagcaatagt ataattttga
      301 acaattacta ttaaatattt gttataataa tttaattaat taatagtaaa ttatgtcgcc
      361 attcttctga caccaaaaaa aaataaacaa tcttttttat tctaacatct cttgttatag
      421 tacacctaaa tcaaatcaaa acttgagcaa ttcatcttag tggatgttaa atggcaaatc
      481 tactaaaata cccacttttc aacacctact tacaatctcc aaaggttcaa cagaaccaaa
      541 attataattt gacacttctt ttttaaagtt tttgtagaag atgaagctaa cgaagtatta
      601 gaaagaatct ttcaactcaa tagaaaaaaa ttcaaatagt tttgtcagat tggagtaagt
      661 tttagaattg ataatcttat cgaattaata tataattaga tatattttcc atatccagat
      721 ttcaaggagg ggtgtttgtg ctatattgat gtcggagggt aagattggaa agaaaacata
      781 aacgagtagt aaagctagta taccaataat aattactatc atcccaataa gaaaaataaa
      841 gttttctcta tcagatctat tagataaaat tttcataatc tatatacacg aaccaattta
      901 attaatattc ctaaaaaatc tacatatcaa atgtaaaaat aattaaataa atagctttag
      961 ataatagtaa tattaatttt agttagttat tttgctaatt ttcttctcta ttctcatatg
     1021 atgatacaaa tagttaattc caactaatta aaaacatcaa atacttttta ttaatagttt
     1081 gaatatatac gaagtaattg aaaacaattt actatttatt tattggtttc tcaattgtta
     1141 tattagtata ccaactagca tatgttttct aattatcaat tttagcaagc aaatagtttc
     1201 tcatatttag attgaacctt ttagttctaa aatatgttga tattttattt ttaaaatctg
     1261 taaatgatga atagtattgt agaacaagta gatcgttttt ggctatgttc catacttctt
     1321 caaataccat aaattcagga gatgctgttg gaagatatac aggaatcaaa ctatctttat
     1381 tatacgcaaa atattctagt actttttttg atttgtagtg ttgttttgcc ttatccaaga
     1441 atagatagca tttgggaaat tttctatgaa tctgtttcag ataatctaaa aaggtatttt
     1501 cgtcaaacca atcatactgt ctgaacagtt gttttccttc cagacttgta gtaccaaata
     1561 atactgactc ctgatgggac cccgtgattc ttacaactgg tctttcatct tttcttatcc
     1621 atactttcct gacaagtgaa tcaaagaaga agaatgattc atcaagtgat ataacggtaa
     1681 attcatcttt tagattatcc agtatctttc ttgctctttt ttaaaacgtt ctttttcctc
     1741 ttttgatgct gtgtttacat gtacttttct tggtaccttc tgtttgaatc cccacttgtg
     1801 catgagtctg tatatgtggg tataatgata tctgattcca ccactctttt tctgacaatc
     1861 agatcttcta cctgttttgt agtccatcct tgtttgcttg atgctaattc attttttatc
     1921 tcgtgtactt tctcttctgg tatatctgga tgtctaccac tttttggtct atcttttaat
     1981 ccttctattc cttcttctct gtatctcttt aaccagtata atccccatgg tctactttta
     2041 tgtagttcat cagcagcata agcaggaatt acattattct attttacttt tattacaaga
     2101 agtaatcttt cctttacctt gatattagtt tccttcttgt ataatctaat caattcattt
     2161 ttggaataca tagagatgat attacagaat aaacatgttg attgatagct tttactctat
     2221 atcaggtatg ataataataa aatatgatta gaaaatatat gctaattggt atagttttat
     2281 tttttatttt aaaagaacta gataaaaagc cctactcatt agaaattgat gctattaaag
     2341 ataaaacaga tatttctggt actttttaca gggtcaaagt aaccaataca ggaacaaacc
     2401 cccttacagg actaaaggtg aacttgggaa aaggcgatat tcaaaacatg gat
//
LOCUS       DATIAS010000683         2977 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1215838, whole genome shotgun sequence.
ACCESSION   DATIAS010000683 DATIAS010000000
VERSION     DATIAS010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215838"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2660
                     /locus_tag="VLA74_13805"
     CDS             <1..2660
                     /locus_tag="VLA74_13805"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003682 - chromatin binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007076 - mitotic chromosome condensation
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chromosome segregation SMC family protein"
                     /protein_id="HSF51830.1"
                     /translation="EVSNKISLIVYEVEKLKAIYKQTVSRIAEIKNRLKTIDETFEDI
                     DKKIDRIEEIVNLTEINIEKLNDEKNQNINLLKKIDQNIVIENNKNAEIISFKSKIEN
                     RNSKLINLYNNLERHIVTNQEKLEIKTQHLNEIYNKINILNSNITNCMFQISHHKNKL
                     KTQLKERDTIARSISNLQDKIKKYGNELENSRTTLDESDQDSLKFQEKNAILVNSMAE
                     DFTISEILKNKNLDTIGIVHDLIKWDKNYHRSVIATASEWMKAIVVRDAGSMIKIAEF
                     AKSKKLPRVKIIPLDLIKSSDKVILKEDNIGIIGHLSNFVSSDFKVLVEFLFGNTIVV
                     RTAKDAYTLSINGYKTVSIEGELFGARSRSLLIDYNSKIIDVVKEINLDNDIKTLRNL
                     ILNLKKLLSNKILKLKKVVKHASEMETMKIKLDNSINHHEEMLKFNENHLYELEKDLD
                     QQINSKKLVEIETSSITEKIYKNEIRFEIVSNTKKKIQNILSEIDANYNSYELNSLNT
                     ERSNLQTIIDSKTYEIQDLTIKTTSQRNDRELHSDRKSILEEEKRNLEKELEDKESTI
                     NLDKEIIENKETDLKTLRDQEQEIINASGNSYSILQTYEEKIKSLLENERRVSREYNS
                     FEKEIALLDKENSNLREQQGKLNNDLVWLGYKQIIEEDYDVDELVTELSEEYDSLKNR
                     INLRANESYIQVIEGYRGMSERKNDLEKERNSIILFIEEINKEKESMFMDAFLKINQD
                     INHTFSTVVGGNSWLEIENQEDVFSGGVRLVVQFPGKPRRDSTALSGGEKTMAATVFL
                     LALQSIKPSPFYLMDEIDAHLDAQNTERLSRILFERARKNQIIMVTLKDSTISKVDQI
                     YGVYPKNGVSQILKYKYPGKSSGSSEIIA"
     gene            complement(2724..>2977)
                     /locus_tag="VLA74_13810"
     CDS             complement(2724..>2977)
                     /locus_tag="VLA74_13810"
                     /inference="COORDINATES: protein motif:HMM:TIGR01727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HSF51831.1"
                     /translation="NIEKVITNPLHPYTKALISAIPKISNTEDKEIMIKNEYNQSHVS
                     KGCKFFNKCIYSIDKCNEVEPDLTMEEKDHHVRCFNYKP"
BASE COUNT         1287 a          392 c          483 g          815 t
ORIGIN      
        1 cagaagttag caataaaatt tctttaattg tctatgaagt agaaaaatta aaggccattt
       61 ataaacagac agtatcaaga atagcagaaa tcaaaaacag attaaaaacg atagatgaaa
      121 catttgagga tattgataaa aaaatagatc gtattgaaga gatagttaat ttaactgaaa
      181 ttaatataga gaaactaaac gatgaaaaga accaaaatat caacctatta aaaaaaattg
      241 atcaaaacat cgtaattgaa aacaataaaa atgcagagat aatttcattt aaatcaaaaa
      301 tagaaaatag gaattccaaa ttaataaatt tatataacaa tcttgaaaga catattgtta
      361 ccaatcaaga gaaattagaa ataaaaaccc aacatcttaa tgaaatttat aataaaataa
      421 atatacttaa ttccaacatc accaattgca tgttccaaat ttcacatcac aaaaataaac
      481 taaagactca attaaaagag agagatacta tagctagatc gatatcaaat ttgcaagata
      541 agataaaaaa atatggaaac gaacttgaaa attcaagaac aacattagat gaatctgatc
      601 aagactcttt aaaatttcaa gaaaagaatg cgattttagt caattcaatg gcagaagatt
      661 tcaccatctc agagatatta aagaataaga atctagatac aataggaatt gtacatgacc
      721 ttataaaatg ggataaaaat taccatcgaa gtgtaatagc cacagcatct gaatggatga
      781 aggccatagt tgtaagagat gcgggaagca tgataaaaat agccgaattt gcaaaatcaa
      841 agaaattgcc tcgagtcaaa atcattccac tcgatctaat aaagtcttct gataaggtta
      901 tactaaagga agacaacata gggataatag gtcatctttc caattttgtt agctcagatt
      961 tcaaagtatt ggtggaattt ttatttggaa atacaattgt tgttcgaaca gcaaaagatg
     1021 catatacttt atctataaat ggatacaaaa ctgtatccat agagggtgaa ttatttggag
     1081 ctagatcaag atctttatta atagactata attctaaaat tatcgatgtc gtaaaagaga
     1141 taaatctgga taacgatata aaaaccctta gaaatttaat tcttaacctt aaaaaattgt
     1201 taagcaataa aatcctgaaa ttaaagaagg tggtcaagca tgctagcgaa atggaaacta
     1261 tgaagattaa actggacaat tccataaacc atcacgaaga aatgctcaaa ttcaacgaaa
     1321 atcatctata cgaactagaa aaggatttag atcaacaaat aaattcaaaa aaattagtcg
     1381 aaattgagac tagttcaatt acagaaaaaa tttacaagaa tgaaatcagg tttgaaattg
     1441 tatccaacac taaaaagaaa atacaaaata tattatcaga aattgacgca aattataata
     1501 gctacgaatt aaatagctta aatacagaga gaagcaatct tcaaaccatt atcgattcga
     1561 aaacctacga aatacaggat ctgacaataa aaacgacctc ccaacgaaat gacagagaac
     1621 tacattctga ccgtaaatct atattagaag aagagaagag aaatctggaa aaagaattag
     1681 aagataaaga atcaacaatt aatctagata aagaaataat cgaaaataaa gagactgatt
     1741 tgaagacact acgcgatcaa gaacaggaaa taataaatgc ttcaggaaat tcgtattcaa
     1801 ttttgcaaac ttatgaagaa aaaatcaaat cgttattgga aaatgagaga agagtttcaa
     1861 gggaatacaa ctcgtttgag aaagagatag cattattaga taaagaaaat tccaacctaa
     1921 gagaacaaca aggaaaatta aataatgatc tggtctggct aggatataaa cagattattg
     1981 aggaagatta tgacgtagat gaattagtaa ctgaactatc tgaggaatac gattcattaa
     2041 agaatagaat aaatctcaga gcgaatgaaa gttatattca agtgattgaa ggttacagag
     2101 gaatgtctga aaggaaaaat gacttggaaa aggaacgtaa ttctatcata ttatttattg
     2161 aagaaataaa taaagaaaaa gagagtatgt ttatggatgc atttcttaaa atcaatcaag
     2221 atatcaatca cacattttca acagtcgtag gtggaaattc ttggttagaa attgaaaatc
     2281 aagaagatgt cttttcaggg ggtgttaggt tggttgttca gttcccagga aaacctagga
     2341 gagattctac ggcattgtct gggggagaaa aaacaatggc agcgacagta tttcttttag
     2401 cattacaatc tataaaacca tcaccatttt atcttatgga tgaaattgat gcacacttgg
     2461 atgcacaaaa tacagagaga ttgtcaagga tcttattcga acgagctaga aaaaatcaaa
     2521 taataatggt aacattgaaa gattcaacaa tttcaaaggt tgaccaaatt tatggagttt
     2581 atcctaaaaa cggtgtatct cagatattaa aatacaaata tcctggaaaa tcctccggat
     2641 catctgagat catagcgtaa aaaataaaga atataataac aaaaaaagtg taaaaaatag
     2701 aacagaacag aaatttatag aaattaaggc ttgtaattga aacaacgaac atgatgatct
     2761 ttttcttcca tagtcagatc cggctcaact tcgttgcatt tatctataga atagatacat
     2821 ttattaaaaa atttgcatcc tttcgaaaca tgtgattgat tatattcatt cttgatcatg
     2881 atctctttat cctcagtatt acttattttg gggatggcag atattaaggc tttggtatat
     2941 ggatgaagag gatttgtaat cactttctca atattcc
//
LOCUS       DATIAS010000684         4311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_942831, whole genome shotgun sequence.
ACCESSION   DATIAS010000684 DATIAS010000000
VERSION     DATIAS010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4311
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942831"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            314..754
                     /locus_tag="VLA74_13815"
     CDS             314..754
                     /locus_tag="VLA74_13815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51832.1"
                     /translation="MALKNYGEEIKVIIVDEKLIIDHNQNRKLANVTVSGEIRFSPQE
                     MYQMINYEEKLFKLKCELWGQDIVDKDKLYTFNPLKYYPSYTPNPIERFTFKEILGQG
                     VLDEDVGKEEIYAKLILTNLLTGNQVIDKTEATSFGKKIYASSF"
     gene            1628..1867
                     /locus_tag="VLA74_13820"
     CDS             1628..1867
                     /locus_tag="VLA74_13820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51833.1"
                     /translation="MFNNTSMEIRAIKKLQNLIDNNYKIDKIHPPIFGSDAEINIVTI
                     TLVSPEGKKENLRAFREESHQLREYIRKNKLFQQY"
     gene            complement(2107..3324)
                     /locus_tag="VLA74_13825"
     CDS             complement(2107..3324)
                     /locus_tag="VLA74_13825"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HSF51834.1"
                     /translation="MTITSYLINSKTIKAVNITLESASIRYEMKSNLNQYLWVHATEV
                     PDIFQLQDIFNLHPLEVESIIHHNLPSKIEKYDKYIFAIIDGIREEKKTSYGSQDQYK
                     STRDENEIAKTEQILVEDDLFIFLEDRWIITINFHNPDFEENIKKRIKHIIHQSLIVS
                     SSPSPSSSSSSAASTDNIITSKPVQIGMMNEIVFRLALEEMISTYYPVLDNIREKLEQ
                     AEDCILDYGKGKNKVTRNQLTDILLLKRKINAVERTMDMISRAVDTFLSDVGLIENDI
                     FSIDSSNKSQMNEINDKQDILTIETFRHMHWLKGKINYMRNDLTNIHNRIINLREAYN
                     STLSSNLNETIRTLTVIATIVLPLTLITGIYGMNFEFMPELVSPHGYYFALGLLLAVG
                     GGMVVYFRIKGWV"
     gene            complement(3435..>4311)
                     /locus_tag="VLA74_13830"
     CDS             complement(3435..>4311)
                     /locus_tag="VLA74_13830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51835.1"
                     /translation="NVVPTLSMLFYTLVSLGILSNSCSHYQRLGKYISRARKTGKLST
                     KYFEDQDMNFMQNLDDRYVPLIEYINHEISVLENIPYIYARTIPRWHNQRHYVEIWVE
                     KQELMSTFGSILRERQVRIVPINRFNPFSLINENVKRLRSYIEQDKKVHINYFGDLDS
                     FSENIHQIFTNKFLEDGLDVDFKRIAINEEQIKKYDLPESYKIVRSRKSKKIDPTIKS
                     FRDKNNENFHIELDTFPAVAPHEFKKTILESVDRFFDISIFDKAIHEHSPIEIRSKVK
                     SQVLRFVERIEKTNL"
BASE COUNT         1525 a          602 c          611 g         1573 t
ORIGIN      
        1 cccattttct cgatgatttt aattattacg tagtcaccaa atctttttaa aatcctttat
       61 atgtattgtt tttaattata tcagattctt tatataaagc aaaaaactga agaattaata
      121 tgataattga tcttaatttc tttatgatat ttaatagggg ttcctcttac tcgataaaat
      181 ggttaaatcc ctgataacac atctatataa atatattggt aacaaaacat aaatttttcg
      241 gcgccgaaaa agatccaaaa ttaaattaaa atatgaattg actccgtcgg catgaatatc
      301 tttaaaggta taaatggcgt taaaaaacta tggtgaggaa attaaagtga taatagtaga
      361 tgaaaagtta ataattgatc ataatcagaa taggaaactt gccaatgtga ctgttagtgg
      421 agaaatcaga ttttcaccac aagagatgta tcaaatgatt aattatgagg aaaagttgtt
      481 taaattgaaa tgtgaattat ggggacagga tatagttgat aaagacaagt tatacacatt
      541 taatccccta aaatattatc catcttatac acccaatccc attgaaaggt ttacattcaa
      601 agaaatactg ggccaaggag ttttagatga ggatgtagga aaagaagaga tatacgcaaa
      661 actcattttg actaatcttc ttactggaaa tcaagttata gataaaactg aagctacaag
      721 ctttggaaaa aaaatttatg ccagttcttt ttgactaatc tttttactga aatcaagtta
      781 tagataaaat ggaaacgtaa aataactttc attatgagat aataactaaa acaattgttc
      841 tgaaataagg tgactttttg aaataataat tcatagataa tataatataa tgtacatttt
      901 tctaaaatct attttatttt attttatttt attatggtca tgtaaattat gtttatcttt
      961 tttttcttat cgtgatagta aattgtatta tcctttcaat ttggatttta ttttcagaca
     1021 aatcaaatgt taaaaaagat tttccctatc tgttttttca catctcttgg catattagga
     1081 tcttccatta ttttatgaag atcgtttcgt ttaatgcaca aaccattttt gtttattttg
     1141 taaaaccaat caatattcaa agggctgata acagtagtat ttttgttgca tcccttcatt
     1201 ccacaaaaat ttaggttatc tttactgaaa caaacatgat cgtcttgaca gccataaatc
     1261 atacggttat ttatatgaag tagatcgtaa taaattttgg gctaaaaaat gataaggaac
     1321 aaataattat tttttagttt actacgataa tcaaatggca ggtacaacta actctataaa
     1381 tctcatttgt tcatacttaa gatacacata atctattcat tttaaaccta acaaatagaa
     1441 tcaatataat agatttgcat aatcagcgaa ttttatattc gaatagattg gtattgctat
     1501 aacacacaaa atagtatatt aaaacataaa ccaaatcaga aaatattatt ttttaattca
     1561 tactaattgc atttattcaa actgttaaat gtaaaaatta taaccgatat ggatctttta
     1621 tattgacttg tttaataata caagtatgga gataagagct ataaagaaat tgcaaaattt
     1681 aattgataat aactataaaa tcgacaaaat tcatcctcct atttttggat cggatgcaga
     1741 aattaacata gtcactatta cattagtttc acctgaggga aaaaaagaaa atttaagagc
     1801 ctttagagaa gaatcgcatc agttaagaga atatattaga aaaaacaaac tctttcagca
     1861 atattaagat gctaataacc aaatctgatt attaaaaatt ttaggtattt tatgacaaca
     1921 tggagtaaag tatacaacca aaaatcaaat gtatctttta aataaatttt ctctatatct
     1981 ttgagtatat taaaatgaaa actgtttttg accagctata attgtatatt tattctatta
     2041 gctatgaaaa agggatggat aatataattt ttaaatataa ttttaatcgg aataataata
     2101 tgaaaattat acccatcctt tgattctaaa atagacgacc atgccgccgc ctacagctaa
     2161 taatagcccc aaagcgaagt agtaaccatg tggagaaact aattctggca tgaattcaaa
     2221 attcattccg taaattccag ttatcaaagt aagaggtaaa acgatggttg cgattacagt
     2281 taaagtccta attgtttcat ttaaattaga acttaatgtg gagttgtatg cttcacgtaa
     2341 gttaattatt ctgttgtgaa tatttgttaa atcattacgc atatagttaa tttttccctt
     2401 taaccaatgc atatgtctaa aagtctcaat tgtaaggata tcttgtttat cattgatttc
     2461 gttcatctga gatttattag aagaatctat actaaaaata tcattttcta ttagaccgac
     2521 atcacttaga aaagtatcaa cagcccttga tatcatatcc atcgttcttt caacagcatt
     2581 aatcttcctt ttgagtaata gaatatctgt taattgattt cttgtaactt tattttttcc
     2641 cttaccataa tctagaatac agtcttcggc ctgttcaagt ttttctctta tattatctaa
     2701 aacaggatag taggtggata tcatttcttc taatgccaaa cgaaatacaa tttcgttcat
     2761 cattcctatc tgaactggtt tagaagtaat gatgttatcg gtactagcgg cagaagacga
     2821 agaggaagat ggtgaaggtg atgatgaaac aattaaggat tgatgaataa tatgtttgat
     2881 tcttttcttt atattttctt caaaatcagg attatgaaaa tttattgtaa ttatccatcg
     2941 gtcttcaagg aagataaata gatcatcttc aacaagtatt tgttccgttt ttgcgatttc
     3001 attttcatct cttgtggatt tatactgatc ttgactgccg taactggtct tcttttcttc
     3061 tctaatgccg tcaattatcg caaagatata tttatcatat ttttcaattt tagatggcag
     3121 attgtgatgt atgatagatt ctacttctaa tggatgaagg ttaaatatgt cttgaagttg
     3181 aaatatgtct ggaacttcag tggcatgaac ccatagatat tgattcagat tagatttcat
     3241 ttcatacctt attgatgcgg attcaagtgt aatatttact gcttttattg tcttggaatt
     3301 tatgagataa gaagtgattg tcaactgtta ttcatattga atcaaaatca atttaataaa
     3361 taaagctttc aaattaaaaa ttcaatacag cagccaaaat aaattggata ggatcacaat
     3421 gttgaaaaat atatctataa atttgtcttt tctatcctct ctacaaatct caaaacttgc
     3481 gatttaactt ttgaacgaat ttctattgga gaatgttcat gaatagcttt gtcaaatatt
     3541 gatatatcaa agaatctatc tacagattca agaatcgttt ttttaaattc atgtggagct
     3601 actgctggaa atgtatccaa ttcaatatgg aaattctcat tatttttatc cctaaatgat
     3661 tttatagtag gatctatttt ttttgattta cgtgatctta ctattttgta gctttcgggt
     3721 aaatcgtatt tttttatctg ctcctcattt atagcgattc gtttaaaatc tacatccaga
     3781 ccatcttcca gaaatttatt agtaaatatc tggtgaatat tttcagagaa agaatcgagg
     3841 tcgccaaaat aattgatatg cacttttttg tcttgttcta tatatgatct aagtctttta
     3901 acattttcat ttatcaaact aaaaggatta aatcggttaa ttggaacaat cctcacttgc
     3961 cgttccctta atattgaccc aaaagtcgac attagttctt gtttttcaac ccatatttct
     4021 acataatgac gttgattatg ccatcgtgga attgtccttg catatatgta cggtatattc
     4081 tccaagactg aaatttcatg atttatgtat tcaatcaacg gtacatatct atcatcaagg
     4141 ttttgcatga aattcatatc ctgatcttcg aaatatttag tagaaagctt accagttttt
     4201 cgtgctctgg agatatattt tcctaggcgt tgataatgac tacaagaatt agataagatt
     4261 ccaagagaaa caagtgtata aaacaacata gataaagttg gaacgacatt a
//
LOCUS       DATIAS010000685         2012 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_943170, whole genome shotgun sequence.
ACCESSION   DATIAS010000685 DATIAS010000000
VERSION     DATIAS010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_943170"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..971
                     /locus_tag="VLA74_13835"
     CDS             105..971
                     /locus_tag="VLA74_13835"
                     /inference="COORDINATES: protein motif:HMM:NF025001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSF51836.1"
                     /translation="MKIIAFHSYKGGTGKTTLAVNLSAYLASKGYNILLIDMDVYAPS
                     LYVYFNIQPKKWINDYLNEKISFSESIYDFTHIMKEFSLKNKIDSQYGAFHAIFSNPS
                     KQEITDLDSITRKESSKSQSLKKMLYIKESKNTETDYDYIILDTSPGIRYWSINSLAI
                     SDEIILSLKMDNIDIEGTKHMALDVYGAFTSYGSKSYLLLNRVAGYCEPPLDFNTSPS
                     NHEIISPFNSIVKEQTETIKNLERLLKMDVIASVPCYCDIQFEKQEYLTVLNNPNHPF
                     TRKINELSKMIQ"
     gene            1066..>2012
                     /locus_tag="VLA74_13840"
     CDS             1066..>2012
                     /locus_tag="VLA74_13840"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HSF51837.1"
                     /translation="MKHFPIEGIIGKYIKYHDIGVYLINGPKASGKIHYCNNFLLNGL
                     RDGAFCICISTSFIENRYKSIYFSKEENLDNKLKVLNPYVLDESGNPELDDKQVLTKL
                     LEEIRKLVNSHVGQPVYLVLSSLTNFLENFDPQIVLKFVTSLTFFLRSHEINSIFAID
                     NGDPESEIFTNKIEHLFDGIFESKLPTSGSHDIRYIRLVSIKGNNNYKSEWMNYSLDS
                     NNIITSIGSETNLICNLCKEQIDENPVFYQDLAFHREHLKTYMKLISFYGITKITEFG
                     SSGILHANFFFIDIVGLSDPSLSVKNQIEKIQILNNFISS"
BASE COUNT          741 a          301 c          305 g          665 t
ORIGIN      
        1 tcctgcaact gaaaaccaca ttgttcaaaa aagttaaaat aattaggtct aaattttgac
       61 tgttcaaaaa agttaaaata attaggtcta aattttgact tgtagtgaaa atcatagctt
      121 ttcattcata taagggcgga actggaaaaa ctaccttagc agtaaaccta tctgcatatt
      181 tggcttccaa gggttacaat attttactta tcgatatgga tgtatatgct ccaagtttat
      241 acgtttattt taatattcag cccaaaaaat ggattaatga ttacttaaat gaaaaaatat
      301 ctttctctga atccatttac gattttacgc atattatgaa agaattttct ttaaaaaata
      361 agatagatag ccaatatgga gcctttcatg ccatattttc taatccatca aaacaggaga
      421 taactgatct cgattcgata acccggaagg aatcatcaaa atcacaatca ttaaaaaaaa
      481 tgctttatat caaagaatcc aaaaatactg aaactgatta tgactacatc attttagata
      541 ctagtcctgg tatcagatat tggtcaatta attcattggc gatatctgat gagattattc
      601 tatctttaaa aatggataat atagatattg agggcacaaa acatatggct ttggatgtat
      661 acggagcttt tacaagttat ggaagcaagt cttaccttct attgaatcga gtcgctggat
      721 attgcgaacc accacttgat ttcaacacat ctccgtcaaa tcatgaaatt atttctccat
      781 ttaattcaat cgtcaaagaa caaactgaaa caatcaagaa tttagagaga ttactcaaaa
      841 tggatgtcat tgcgtcagtt ccttgttact gtgatataca atttgaaaaa caagaatact
      901 tgactgtatt aaataatcct aatcatccgt tcacccgaaa aataaatgaa ttgtctaaga
      961 tgattcaata atatttgagc cactgacaaa gcatacttaa gcgttcatga tgcacaaata
     1021 ttctagaggg aaaaagagaa atatctattt actataggtt cttgtatgaa acatttcccg
     1081 atcgagggta taataggtaa atacataaaa tatcatgata ttggtgttta tctaataaat
     1141 gggcctaaag cttcgggaaa aattcactat tgcaataact ttcttttaaa tggtttaaga
     1201 gatggggcgt tctgtatatg tattagcact tctttcatag aaaatagata taagagtatt
     1261 tatttttcta aagaagaaaa tttagacaat aagttaaaag tattgaatcc atatgtttta
     1321 gatgaatcag ggaaccctga actggatgat aaacaggtac taacaaagct cttggaagaa
     1381 attagaaaat tagttaactc tcatgtgggg caaccagtat atctagtgtt aagctcccta
     1441 accaattttc tagaaaattt tgatcctcaa attgtattaa aattcgttac tagtctaacc
     1501 ttctttctta gaagtcatga aataaattcc atttttgcaa ttgacaatgg agatcctgaa
     1561 tcagaaatat ttactaataa aatagaacat ttgtttgatg gaatttttga aagtaaatta
     1621 cctacaagtg gatcacacga tattagatat ataagactag tttctataaa agggaataat
     1681 aactataaat ccgaatggat gaattatagc ctagattcca ataatattat tacttctatt
     1741 ggtagcgaaa ctaatttaat ttgtaaccta tgcaaggaac agattgatga aaatcccgtc
     1801 ttttatcagg atcttgcatt tcaccgtgaa catctaaaaa cctacatgaa attaattagt
     1861 ttttatggaa ttaccaaaat cactgagttt ggatcgtctg gaatattgca cgctaatttt
     1921 ttctttatag acatcgtagg attgtcagat ccttctttat cggttaagaa tcaaatcgaa
     1981 aaaattcaaa tattaaataa tttcattagt tc
//
LOCUS       DATIAS010000686         6009 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1621920, whole genome shotgun sequence.
ACCESSION   DATIAS010000686 DATIAS010000000
VERSION     DATIAS010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 6009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6009
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1621920"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..917)
                     /locus_tag="VLA74_13845"
     CDS             complement(210..917)
                     /locus_tag="VLA74_13845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51838.1"
                     /translation="MTLFIFFIIPGSFTAFGIELFSKDDKPFGISQDVWMHKYWNWWV
                     SLSTEETTTIKDGCLINKTNSVVFVIEPTIGIVPNQICDISSKQGILIPLWPGWCDSG
                     TDKDYKVAYPEKTWTDCARERYNTGHIRAEAMVDGHYIAKMDVKLSSPLVGGALDYKI
                     TSLENVTEIHGNEFTLIISEDSHKNAIPGTHVAGWHGWVIFLEPLPPGKHTLFYSNKV
                     SGPNANKAEVTYTLNVK"
     gene            1791..2966
                     /locus_tag="VLA74_13850"
     CDS             1791..2966
                     /locus_tag="VLA74_13850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51839.1"
                     /translation="MNIAKKNSESHYNISRKIKYLHWFVLYSQILTLFIILAIILQII
                     LVKKYNIVLLHAETYLAHISTLVFLILLVFIFIRWYKSKRNYMIILFAISFSLLAINI
                     AISLIYLDSYISRAISIYSDIKQYNIAIFVTNFAVLALNQKLSIVYDLVSILSFSFMW
                     IATAILLSHYRYKLGRIKYFLLISIPLIYYLSSFESYIQNAFLSLILDSPTISAIFYI
                     LIFNITGQIGALFFSLSFLIASTLVAKSKIRQSLLISGIGIAIIFGSLEITTLQYTLY
                     PPYGLITLAFMPLGSFLLFIGILTSAQNVSRNIEIRQELYKGTKSELSFLKEIGEAER
                     VQELVDKCKKIAKRTPIPGETDNFDLEQGEVMEIIENVLNELKTTKNRQISQDKNEK"
     gene            3105..3710
                     /locus_tag="VLA74_13855"
     CDS             3105..3710
                     /locus_tag="VLA74_13855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51840.1"
                     /translation="MTHFDYFSLHDKIYGLTYGQWTVKWWQWIWSIPDSTSPLRDYDG
                     KNANVNQPEKDVWFLAGTWATEKMIKIPHREVTIPSDRAILFPIINCEANPVEYPQLK
                     TENDIVNHVVNDENTIVLKEAYINNIAIPLQRVRSDPILFPLKVPSRDNNEIFIDTKA
                     SADGFWVFLKPLPVGYYHIKFKGACEMGRLNTAADYKIKIV"
     gene            complement(3808..4521)
                     /locus_tag="VLA74_13860"
     CDS             complement(3808..4521)
                     /locus_tag="VLA74_13860"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HSF51841.1"
                     /translation="MPLSILKIISKILDGSIVTFKDRQSASELLCSIIRNKFSKIPNN
                     EVLILAIPRGGIIVGDIIAKKFGYQFNIVIPRRMVAPNNKELSIGGIMKDDTVYCNTL
                     LIKALKITDHYLHLEREKQLREIKNRELLLGRQVDGYQIKDKNIILVDDGVATGSTLI
                     VTSRWIRKYKPKNLIILTPVCPEPVFKVLKQEANHIESILTPSSKNFTTVEMFFQDFE
                     QLDFEKLSKILQKHKKNIN"
     gene            4664..5611
                     /locus_tag="VLA74_13865"
     CDS             4664..5611
                     /locus_tag="VLA74_13865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-binding protein"
                     /protein_id="HSF51842.1"
                     /translation="MIAHKRIVSFLPSATEILYELGVDSQLVGVTHECNYPPQTKTKP
                     RVINSAFDTSTMSSKEIDNKIVELFNNGKDIYIINDNILKELKPEVIVAQGICEVCSP
                     FTKEIKRAISILGYNPKVIILDPHNISDILDNIYEISKSVGKIKEGQNLVNLLEYKIN
                     HIKKITESKNKDDLSKILCLEWIDPFFTAGHWVPEMVEIAGGINGLSKSKEQSRRASL
                     EEIKKFDPDKIILMPCGFNIDRTIKEYKNTNLNSNQKWNNLRAIKNSEIYVVDANSYF
                     SKPGPRTIIGIEILAKIISPNEFKDIKAPENAYTKLIDD"
     gene            complement(5641..>6009)
                     /locus_tag="VLA74_13870"
     CDS             complement(5641..>6009)
                     /locus_tag="VLA74_13870"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HSF51843.1"
                     /translation="DKKSTTTNSKGITNTKFNIRNPILVGFIFTILNPFFLVWWFTIG
                     SKMISDSLINFGIVEGTSLVFFSHIWMDYFWLWVTSFMINKGKSVIKEKVYRIFVFAI
                     SVILGIYGMYLLFTSLIRLT"
BASE COUNT         2173 a          875 c          828 g         2133 t
ORIGIN      
        1 tcttgtctgc agtatttttc atcaatgatt ttagactgtt cttctgtgct gtagtgaggt
       61 tgagtttaga aacatggtac atataattac gatattctgg ataccttaag ctttaactat
      121 tcaagaattt agacctatta gttaaaatga tatgacatca gttgaggcac ttgacttaat
      181 ataggaaaag aagataatct agagtgatgt tatttcacat taagggtgta tgtaacttcc
      241 gctttatttg catttggtcc cgagactttg ttagagtaaa aaagggtatg ctttccagga
      301 ggaagtggtt ccagaaaaat aacccatcca tgccatccag caacatgagt gccgggtata
      361 gcatttttat ggctatcctc ggatataata agagtgaatt catttccatg tatttcagta
      421 acattctcta gagaagttat tttataatct aatgctccac ccacaagtgg cgaggataat
      481 tttacatcca ttttagctat ataatgacca tcaaccatag cttcggctct tatatgtcca
      541 gtattatatc tttctctagc acagtctgtc catgtttttt ctggatatgc tactttatag
      601 tccttatcag ttccactgtc gcaccagcca ggccataacg gtatcaagat accttgctta
      661 gaagatatgt cacatatttg atttggaaca attccaattg tcggttctat aacaaaaaca
      721 acagaatttg ttttgttgat taaacatcca tcttttatag ttgtagtttc ttcagtagaa
      781 agcgagaccc accaattcca atatttatgc atccaaacgt cttgcgatat tccaaatggt
      841 ttatcatctt ttgaaaataa ttcaatacca aatgcagtaa atgatccagg aataataaaa
      901 aaaatgaata acgtcaataa catggtcaac atataagcgg ttaaaaaatt ccatttcttt
      961 gaatcagtat gaaaacaaat gaatttcata ttttgaaaat atatgagatc attcttattc
     1021 ttttcgaaaa ttttttaaac aacataaatt gttttctcat cagcattaat tcgtccattg
     1081 tcattcatgg catacaaaga tttgtatatt gaaagaattt atactaattg ggatcaaggc
     1141 aaatgtaaaa aatacatatg ttgatggatc atatagagga tatagaatgt aacttagttc
     1201 tttatattac gatattgaag tagcagctag atgagaaaga agtgttcaac aaaaaaaata
     1261 gaaatcacta ccctgaaaag aaaactacaa tagattattt ctgatatatg gaaatgagaa
     1321 atgagctatt ttatagatgg agaaggcaaa ttttattctc ttctatagat attatttaaa
     1381 gatatactat atcgcttaaa tggaagaata gaatagataa acttttgttg aagtatatct
     1441 acaggatata tttataataa ttccattatt tacagtttat tataaaatac tcctattccg
     1501 tttatttatt ctaaaaacag atatcctaaa ttagttactg ttattattat atgtacttgt
     1561 caaaatcata ccgattccat agtaagataa gaaaattttt tgtctatttt tcctcagatc
     1621 taactaaaaa gacttctgtt ataatgattt tgattgttat gataattgta actctcgatt
     1681 caacgatctt tcaattcgtt tcctatgcct cactcaatct tccaatctca tcacatatag
     1741 tgatcttttt ggctttttca ctactatttt cactaagttg tattataata atgaatatag
     1801 ccaagaaaaa ctctgaatct cattataaca tatcaagaaa gatcaagtat cttcattggt
     1861 tcgttctcta tagtcaaatt ttgacattat tcattatact ggctatcatc ctacaaataa
     1921 ttcttgtaaa aaaatataat attgttttac tgcatgctga gacatatctt gctcatatat
     1981 caacattagt ctttttgatt ttactggttt tcattttcat aaggtggtac aagtcaaaaa
     2041 gaaattatat gataatatta ttcgcaatat cattttcatt gttagctatc aacatagcaa
     2101 tctctctaat atatcttgat tcttatattt cacgtgcaat atcaatatat tcagatataa
     2161 aacagtataa tattgcaata tttgtcacaa actttgctgt cttagctctt aatcaaaagt
     2221 tatctattgt ctatgatcta gtctccatat tgtcattctc atttatgtgg atagctacag
     2281 ctatactatt aagtcattat agatataaat tgggtagaat taaatatttt ttactcatat
     2341 caataccttt aatatattat ttgtcctctt tcgaatctta tattcaaaat gcattccttt
     2401 ccttgatact agattctccg actatttctg ccatcttcta tattctgatt tttaatataa
     2461 caggacaaat tggagcttta tttttcagtt tatcgttctt gattgcttct actttagttg
     2521 caaaaagtaa gattcgccaa tccttattga tttctggtat tggtatagca atcatctttg
     2581 gttccctaga gattacaaca ctacaatata ccctttatcc gccttatggt cttataacat
     2641 tagcgtttat gccattaggc tcattcttgt tatttattgg aattctgact tctgcgcaga
     2701 atgtatctcg aaacatagag ataagacagg aattatataa aggtacaaag agtgaacttt
     2761 cttttctaaa ggaaattgga gaggcagagc gagtacaaga acttgtagat aaatgtaaaa
     2821 aaattgctaa acgtacccct attccaggag aaacagacaa tttcgatttg gaacaaggag
     2881 aggtaatgga aataatagag aatgtgttaa atgaacttaa aactaccaag aatagacaaa
     2941 tatcacaaga taaaaatgaa aaataagata aaaaaaaggt caaggaaatt atatatgata
     3001 aaaaaaatag taatgagaat taaattaaga attaaaaata ttagataata aaaagaattg
     3061 ggagtctcag aatatttata tatttttaac ttacatcatt ttaaatgacc cattttgact
     3121 attttagtct acatgataaa atatatggat taacttatgg acaatggact gttaaatggt
     3181 ggcagtggat atggtctata ccagattcaa ctagtccatt gagagattat gatggcaaaa
     3241 atgctaatgt taatcaacca gaaaaagatg tatggttttt agctggtaca tgggctacag
     3301 aaaagatgat aaaaattcct catagagagg taacaattcc ttctgataga gcaatattat
     3361 ttcctataat aaattgtgaa gctaatccag tagaatatcc acaacttaaa actgagaatg
     3421 atatcgtaaa tcacgtagta aatgatgaaa atacaatagt tttgaaagaa gcatacatca
     3481 acaacatagc aattccactc caacgtgttc gttctgaccc tattcttttt ccacttaaag
     3541 ttccttccag agataataat gaaattttta tagatacaaa agcttctgct gatggctttt
     3601 gggtattctt gaaaccatta ccagtaggtt actatcatat aaagttcaag ggcgcctgtg
     3661 aaatgggacg attaaataca gctgcagatt ataaaattaa gattgtatga tataatatca
     3721 tatcaccttc ctttcatgta ctataaattt caaaaataat ttctaaaaat aattacattt
     3781 ttttcttctg agagaaataa aattatttta atttatattt ttcttatgtt tttgtaatat
     3841 cttactaagc ttttcaaagt ctaattgttc aaaatcttga aaaaacattt ctacagtagt
     3901 aaaattcttt gatgacggcg ttaatataga ttcaatatga tttgcttctt gttttaatac
     3961 tttaaagact ggttcaggac atacaggagt aagtattatc aaatttttag gtttatattt
     4021 tctaatccaa cgtgatgtga caattaaagt agatccagta gcaactccat catcaaccag
     4081 aattatattt ttgtctttaa tttggtatcc atctacttgt cttcctaata acaattctct
     4141 atttttaatt tctctcaatt gtttctctct ttctaaatgt aaataatgat cagtaatttt
     4201 caaggctttt atcagtaaag tattacaata tactgtatca tctttcataa ttcctcctat
     4261 tgataattct ttattgtttg gagctaccat tctccttggt ataacaatgt taaattgata
     4321 tccaaatttt ttagcaataa tatcacctac tattattcct cctcttggaa ttgctaagat
     4381 caaaacttcg ttattgggga tcttgctaaa cttatttctt ataattgaac ataataactc
     4441 agatgcactt tgtcgatctt taaatgttac aatagatcca tccaaaattt tagaaataat
     4501 ttttaatatt gataatggca aattccatta tttctactaa atcttaattg atattttttt
     4561 ctatttttgt ttaaaatatc ttttatgtat ttatataatg ctaaaagaac attattttta
     4621 aaataatatt aaataaatat tgttatcatt aatattatat actttgattg ctcataaaag
     4681 aatagtatct tttttgccta gtgctacaga aatactttat gaactaggag tagattctca
     4741 acttgtaggt gtaactcatg aatgtaatta tcctccacag acaaaaacaa agccaagagt
     4801 aataaattca gcatttgata catcaacaat gtcttctaag gaaattgaca ataaaattgt
     4861 agaacttttt aataatggaa aggatattta tattataaat gataatattc taaaagaatt
     4921 aaaacctgaa gttattgttg cacaaggaat atgtgaagta tgttcacctt ttacaaaaga
     4981 aataaagcgt gctatctcca tattgggata taatccaaaa gtcatcattt tagatcctca
     5041 taatatatca gatattttag acaatattta cgaaatatca aaaagtgttg gaaaaatcaa
     5101 ggaaggacaa aatttagtca acctccttga atataaaata aatcatatca aaaaaattac
     5161 tgaatcaaaa aacaaagatg atttatctaa aattttatgt cttgaatgga tagatccttt
     5221 ttttactgct ggtcattggg ttcctgaaat ggtcgaaatt gctggaggta taaatggtct
     5281 aagcaaatcg aaagaacaat caaggagagc atcacttgaa gaaattaaga aatttgaccc
     5341 tgataaaata attctcatgc catgtggatt taacatagat cgaacaatta aagaatacaa
     5401 aaatactaat ttaaatagca atcagaaatg gaacaattta agagcaatta aaaatagtga
     5461 aatatatgtt gtagacgcga actcatattt tagtaaacct ggaccaagga caataattgg
     5521 tatagaaata ttggcaaaaa ttatttctcc aaatgaattt aaagatatta aagctcctga
     5581 aaatgcatat accaaattaa ttgatgatta aataaataac ttaatttata ttaaattttt
     5641 ttatgttagt ctaatcaaac tcgtaaataa caaatacatt ccataaattc caagaataac
     5701 acttattgca aatacaaaaa ttctatagac tttttctttg ataacagatt tacctttatt
     5761 gatcataaat gatgtaaccc atagccaaaa ataatccatc caaatgtggg aaaaaaagac
     5821 tagtgatgtt ccctcaacta ttccaaaatt aattagagaa tctgaaatca tttttgaacc
     5881 tatagtaaac caccatacaa gaaagaaagg attgagtata gtaaaaataa atcctactaa
     5941 tattggattt ctaatattga actttgtatt agtaattcct ttagagttgg tagtagtaga
     6001 ttttttgtc
//
LOCUS       DATIAS010000687         2330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2033778, whole genome shotgun sequence.
ACCESSION   DATIAS010000687 DATIAS010000000
VERSION     DATIAS010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2033778"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VLA74_13875"
     CDS             <1..588
                     /locus_tag="VLA74_13875"
                     /inference="COORDINATES: protein motif:HMM:NF028456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSF51844.1"
                     /translation="EHFKRFKLKENEPISARTPIGTENGIFWNTGDEHNEEGHIIEDP
                     TVRIKMMNKRMTKLELILQTIPDEDKALSYNGNSDIVITSWGSTKGAILDTLDELNKE
                     GIKIKFVQIKLLNPFPQQLLKKLLHSAKTIINIEMNYSSQLAKLIKQNLQRDIDYEIV
                     KYNGRPISYDEIHKVIKDIVNNNIDKRRIVLDHGA"
     gene            578..1549
                     /locus_tag="VLA74_13880"
     CDS             578..1549
                     /locus_tag="VLA74_13880"
                     /EC_number="1.2.7.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018491 - 2-oxobutyrate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0019164 - pyruvate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0047553 - 2-oxoglutarate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HSF51845.1"
                     /translation="MALKLADYKTEVHNDWCPGCGDFGILNAIQMSLAELKIPTHKAA
                     IFSGIGCSGKTPHFIHTYGIHTLHGRVLPFAQGAKLCNPELEIIAVGGDGDGLGIGVG
                     HFVNSGRRNIDMTYIIYNNGVYGLTKGQASPTLKLGMKTKSLTQANINDSINPIALAF
                     ISGFTFIARGYAYDIRHLKDLIIKAIQHKGLAFVDILQPCPTYNDINTKEWFQGMDNT
                     DQTNGKPIPRIYKLENSGYNGELKEADQYSEIASRIIEKSNEWGDRIPIGIFYQNENI
                     PSYDERISIKIDNYLKYPPAHQEIVSDKNKTNSNINEILESFKSNNV"
     gene            complement(1733..>2330)
                     /locus_tag="VLA74_13885"
     CDS             complement(1733..>2330)
                     /locus_tag="VLA74_13885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ammonia monooxygenase"
                     /protein_id="HSF51846.1"
                     /translation="NSTLLTINAGDYIFYTDWAWTSFVVFSISQSTMLVVGAIYYMLF
                     TGVPGTATYYATIMTIYTWVAKGAWFSLGYPYDFIVVPVWIPSAMLLDLSYWATRRNK
                     HAAILIGGTLVGMSLPVFNMINLLLIKDPLEMAFKYPRPTLPPYMTPIEPQVGKFYNS
                     PVALGAGAGAVLSVPIAALGAKLNTWTYRWMAAWSKWD"
BASE COUNT          909 a          342 c          376 g          703 t
ORIGIN      
        1 gaacatttta aaagatttaa attgaaagaa aatgaaccga tttctgctag aacaccaatt
       61 ggtacagaaa atggtatttt ttggaatact ggtgatgaac acaatgaaga aggacacatt
      121 atagaagatc ctacagttag aataaaaatg atgaataagc gtatgaccaa attagaattg
      181 attttacaga caataccaga tgaagacaaa gctttatcct ataatggaaa ttctgatatt
      241 gtaattacta gttggggatc aacaaaggga gctattcttg ataccttaga tgagttaaac
      301 aaagaaggaa taaaaataaa atttgtccaa attaaattat taaatccttt tcctcaacaa
      361 ttattaaaaa aattgttaca ttcagctaaa acaattatta atatagaaat gaattattca
      421 tctcaattag caaagcttat caaacagaac ttgcagagag atatagatta tgaaatagta
      481 aaatataatg gtagacctat ttcatatgat gaaatccata aagtaataaa ggatatagta
      541 aataataata ttgataagag gagaattgtt ttagatcatg gcgcttaaac tagcagatta
      601 taaaacagaa gtacataatg attggtgtcc tggctgtggt gattttggaa tattaaatgc
      661 tatacaaatg tcattagccg aactaaaaat tcctacacat aaggctgcca ttttttcagg
      721 tattggatgt tcaggaaaaa cgccccattt tattcacacg tatggaatac atacattaca
      781 tggaagagta cttccttttg ctcaaggagc taaattatgt aatcccgaac ttgagataat
      841 tgctgttgga ggagatggag atggtcttgg aataggtgtg ggacactttg tcaattccgg
      901 aaggagaaac atagatatga catatataat ttataataac ggagtttatg gattaacaaa
      961 aggacaagct tcacctacat taaaattagg tatgaaaaca aaatcattaa ctcaagctaa
     1021 cattaatgat tctattaatc caatagcact tgcttttatt tctggtttta cttttattgc
     1081 aagaggctat gcatatgata taagacattt gaaagatttg ataataaagg ctatacaaca
     1141 taaaggatta gcctttgtag atatcctaca accttgtcca acttataatg atataaatac
     1201 caaggaatgg tttcaaggaa tggacaatac tgatcaaact aatggaaaac ccattccacg
     1261 tatttataaa ttagaaaact ctggttacaa tggagaattg aaagaagcag atcaatattc
     1321 agaaattgct tcaagaatta tagagaaatc aaatgaatgg ggagatagaa tacctatcgg
     1381 catattctat caaaatgaga atattccatc ctatgatgaa agaatctcaa taaaaataga
     1441 taattattta aagtatcctc ctgcacacca agaaattgtc tcagataaaa ataaaacaaa
     1501 ttctaacatt aatgaaatat tggaatcatt taaaagtaat aatgtataaa ataaatttat
     1561 aacaaaaaat aaaacaacaa taatttttat tataatttaa tctactattt atattaaaga
     1621 aaatttgaaa atttcaaaaa tataaaaata taaagttgta tttttatttt ttattttata
     1681 aatcaaaaaa tctaagattt ttcaaaaaaa ttaaaagaaa aatgaaggat ttttaatccc
     1741 atttactcca ggctgccatc cacctatatg tccaagtatt taacttagca cctaatgctg
     1801 ctattggcac actaagcact gcacctgctc ctgcacctaa agctacaggg ctattgtaga
     1861 acttaccgac ctgaggctct ataggcgtca tatacggggg tagcgtaggt ctaggatatt
     1921 taaatgccat ttctagcgga tccttgatta gcaacaggtt tatcatattg aatacaggca
     1981 atgacattcc aactagtgtt ccacctatta gaatggctgc atgtttgttt ctccttgtag
     2041 cccaatatga taggtctaat aacattgcag aaggaatcca gactggaact actataaagt
     2101 catagggata tcctaaagaa aaccatgcac cttttgcaac ccatgtatat atcgtcataa
     2161 ttgttgcata atatgtagct gtacctggga ctcctgtgaa gagcatgtaa taaatcgctc
     2221 ctaccacaag catagtagat tgtgaaatag aaaatacgac aaatgaagtc caagcccaat
     2281 cagtatagaa gatatagtca ccagcattga tagttaataa tgtactgtta
//
LOCUS       DATIAS010000688         3822 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_262555, whole genome shotgun sequence.
ACCESSION   DATIAS010000688 DATIAS010000000
VERSION     DATIAS010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3822
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262555"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            399..887
                     /locus_tag="VLA74_13890"
     CDS             399..887
                     /locus_tag="VLA74_13890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51847.1"
                     /translation="MFSDIRPKSCTYGCGVEIYWNTEENTYYELDSKKKHICPNIATY
                     NREPAIIPPTTAAKPSYYNKEFSNTNEATTATRIKSKMDNSFEFLQGSPDTIKRNYEF
                     LSDIIRDCNGKVHGSQSHISNNSLYLIVYYEVPEGQREHLKKKIGNFSQYKNEMAYYR
                     IR"
     gene            complement(1534..1869)
                     /locus_tag="VLA74_13895"
     CDS             complement(1534..1869)
                     /locus_tag="VLA74_13895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51848.1"
                     /translation="MTRVNNNNYLTIIDNKIKPIIMVRDSNLRLSLSSQSSTSIANKK
                     DDRLELLEIPKGLIEILQEAGFTVETILDSGPSHIAETLGIESYVGEIIYKETKKAST
                     NIKSKFLIN"
     gene            2075..2401
                     /locus_tag="VLA74_13900"
     CDS             2075..2401
                     /locus_tag="VLA74_13900"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HSF51849.1"
                     /translation="MQCPNCSNPMQESKKYEVDIDYCPTCKGVWLDRGEIDKIANIQS
                     KFEEEHYQKYHSDRRDYDEGDDDYYNRRREYDDDDDNDNDDYYYNRRRRRDGGRGFFG
                     DLFNFD"
     gene            complement(2971..>3822)
                     /locus_tag="VLA74_13905"
     CDS             complement(2971..>3822)
                     /locus_tag="VLA74_13905"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSF51850.1"
                     /translation="FNELKNIKTILESKVTKLATALQIASNLPQILQPANISLIDSKI
                     NGIPEDADMEKRKIAKTLLDQFNELFSVVFLLNNGDVYFDEPFERQLNRTATNLSFRD
                     YYQAVEQTKKTYLSDAIISITTGRNLAVIATPVINKENEMTGILLGAINFNNYDKFLQ
                     SLNLQNNSRLVLIDKTGVKIGDSNENETSASKESFEKKQFSNLTSFKFALEGKSGSII
                     EKFDGKESQITFLPYDLFQNKRILLLIQGCDLDVNNSNLCIDDNYNNKELHLFNENVL
                     TRLGSFF"
BASE COUNT         1406 a          474 c          566 g         1376 t
ORIGIN      
        1 ttttctagtt tcctaacttt ttctaaggta tttaagtttt gtaggcattt ttgttagagg
       61 acctccaata ttatcttcca cttgctagta tatgagccca attggttagt gggctcggag
      121 gagtgtgaac tgattttgac acaattttgt agcccagaat agaaatatac aaaatgaaag
      181 taattcaatt aaagatgaaa atgtcatgat ataattaaga gaagcaaaag gagaatgaca
      241 agaaattagt ataatattat aatattattt gattataaat atgcgagtcg tcaaaccaag
      301 ttactaataa taatacagct attatatatg gacattgttg tataaataaa tattgaaaca
      361 taacaaagaa ctataaagag gaagaggaat aaattatcat gttttcagac atacgcccaa
      421 agagttgtac ttatgggtgt ggagtagaga tatattggaa tactgaagag aatacctatt
      481 atgagttaga ttcgaagaaa aaacatattt gtccaaatat agcaacatac aatagggaac
      541 ctgcaattat tcctccaact acagcagcaa agccatctta ctacaataaa gaattttcaa
      601 atacaaatga agcaacaaca gcaacgagaa taaaatcaaa gatggataat tcctttgagt
      661 ttttacaagg ctctccagat acaatcaaaa gaaattatga gttcctttct gacattataa
      721 gagattgtaa tggaaaagtt catggaagtc aatctcatat atctaataat agcctgtatt
      781 taattgtcta ttatgaagtc ccagaaggtc aaagagaaca tttaaagaaa aagattggca
      841 acttttctca atataaaaat gaaatggctt attacagaat acgctaaaaa tctttaattt
      901 ttaattccaa ttattatttc tattatcttt ctattacatc taaaagttga tcttattctt
      961 tcagtaaaaa aatataaaag agcaaagaac aaaaatttct tttgtgattt atctatagac
     1021 gtataaatat tgagatttta ttatatatat tttttatata gttctatatt caatctaggg
     1081 gataggttaa cgtagtttac tttgcttatt atattatagg agtcgatatt aaaaaaagtg
     1141 tcgaataaac aaactattat tagtataaat aaaaaaaact attatgacaa atacaattgt
     1201 aaatttgcat tttgtgaatc atgttattgg tttgctacta ttttagtaaa aaacaaattc
     1261 aataatacta atcattgtta tatttgtaac aaaaaagata ttcatatagg aacaatttta
     1321 atttaaaaat agtatattac atgaaattat aatttacctt tgaatatgtt caatgaaaaa
     1381 attgtagata atactaaaat ccatagaacg agaaaggaga atgtgcagag cctcgttact
     1441 tagtttgcct ttaaagtaac tataccattg ggtattgtca atatcatgag aatatcacaa
     1501 aaaacgtatt gttgcttttg gatatgtagt tatttaattt attaaaaatt tagattttat
     1561 attggtactt gctttttttg tctctttgta tattatctcc cctacatagg actctattcc
     1621 tagtgtttct gcaatatgag aaggtccaga atctaatatc gtttcaactg taaaaccagc
     1681 ttcctgcaaa atctctatca gtccttttgg aatttctaaa agttctaatc tatcatcctt
     1741 tttattggct atacttgttg atgattgtga agataaagat aatcgcaaat tggaatctct
     1801 taccattatt atgggcttaa ttttgttatc aattattgtt aaataattat tattatttac
     1861 tctcgtcata tgttattata agagaagata acttataagt aaattagcac ctttctatat
     1921 agatctatta gtatactata gtacttgtaa ggaatgtcat gacatattca aaagagtaac
     1981 ggtatgatga attatttatg agaacttcat aaaaattttc taatccaaaa caaacatctt
     2041 aatttatgca tggataatat ttgtaggaaa taatatgcaa tgtccaaatt gttcaaatcc
     2101 aatgcaggaa tctaaaaagt atgaagtcga tattgactat tgtccaacat gtaaaggagt
     2161 atggttagat aggggagaga tagacaaaat agcaaatatt caaagtaagt ttgaagaaga
     2221 gcattatcaa aaatatcata gtgatagaag ggattatgat gaaggtgatg atgactacta
     2281 taacagaaga agagagtatg atgatgatga tgataatgat aatgatgact attattataa
     2341 cagaagaaga agaagagacg gtggaagagg attctttggt gacttattca actttgatta
     2401 attctctact tagtgcatat tttgaatagt aacttttatt tcttttttgt tattgattct
     2461 tatacatttt taactcaata atgaaataat ttaagtaaat aaatacctat atcatcttct
     2521 tttatagtta aacatattga accctactag tatacgggct cggagggctt cgagttctca
     2581 ttatatcagg gttcggtaac atattaaata aagtttttta tttaaaaaat tacacattta
     2641 tggtaaaagg aagtattaat acaaatacaa caatttgata actagacttt tgtgctgttt
     2701 tcgatacgac tgcggaggtg tgtgaattga ttttgacaca attttgtagt taaaaaatgc
     2761 atttcaaaat aaagggttat ccagaaaaat ttattcttaa tatgaggagg agataaagat
     2821 tcatgatagt atctaaaatt taaaaagtat tacaataaaa ataatattta acttttagat
     2881 aagtcaatat attttaacaa agtctaataa ctatactaag tattaatatt gagtaataaa
     2941 aaaagattta agaataaaga aaagttacct ttaaaaaaag ctacctagtc tagttagaac
     3001 attctcatta aatagatgaa gttctttgtt attgtaatta tcatctatgc atagatttga
     3061 gttatttaca tcgaggtcac aaccttgaat gagtagtaaa atccttttat tttgaaagag
     3121 atcgtatgga agaaaagtga tttgactttc tttcccgtca aatttttcta taatacttcc
     3181 tgatttacct tccaatgcaa acttgaaaga ggtaagattt gaaaactgtt ttttctcaaa
     3241 agattctttg gatgctgatg tctcattttc attagaatcc ccaatcttta ctccagtttt
     3301 gtcaattaat accaatctgc tattattttg taaattaagt gactgcagaa atttgtcata
     3361 attgttaaaa ttaattgctc ctaacagtat tcctgtcatt tcattttctt tatttattac
     3421 aggagtagca attactgcca gatttcttcc tgttgttata gaaataattg catcactcaa
     3481 gtaagttttt ttagtctgtt ctactgcttg ataataatct ctaaatgaaa gatttgttgc
     3541 agttcgattt aattgacgtt caaatggttc gtcaaaatat acatctccat tatttaataa
     3601 aaatacaact gagaaaagtt cattaaattg atccaataat gttttagcaa tttttctttt
     3661 ctccatatct gcatcttctg gtataccatt aatttttgaa tctatcaaac tgatattagc
     3721 aggctgtaaa atttgtggta gattactagc aatttgtaaa gctgtagcta gttttgttac
     3781 cttactctca agtattgttt ttatattttt gagttcatta aa
//
LOCUS       DATIAS010000689         2371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1487561, whole genome shotgun sequence.
ACCESSION   DATIAS010000689 DATIAS010000000
VERSION     DATIAS010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487561"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VLA74_13910"
     CDS             complement(<1..402)
                     /locus_tag="VLA74_13910"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF51851.1"
                     /translation="MNKIWDKVYSNDSSFFGEEPSNFALMCYEELVKHKVKRILELGC
                     GQGRDSLFFASKGFKVYAIDSSKIAIENLSSKSKEKNFSLTLKIIDAIQGLPFPNSYF
                     DAVYSHMFYNMDFTDDELKFLFSESKRVLKNN"
     gene            482..1246
                     /locus_tag="VLA74_13915"
     CDS             482..1246
                     /locus_tag="VLA74_13915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51852.1"
                     /translation="MIDSHQYFHKYAYTIIFFVFVSLISIESLSTQSQTNPVQYAIVQ
                     SLSLSTNTLLLNDNSEKQNNSKMIKAFGHFANNQIKDGVVTWIQGGFWELTINNITND
                     ISSSNPNNNNNNILINNNNSKADFIANFTMIKPDGSLSHNHNIGNFISDKVIFTDKDI
                     VVIGIADIYSDDNKNEYKSVPLTIHLMGKKVLGLTIDVSKTEGHFSSPNEMFGTLISG
                     IGLDTSAIDNSVQTKMHHNTATNDIVEKESMTLMQH"
     gene            1446..>2371
                     /locus_tag="VLA74_13920"
     CDS             1446..>2371
                     /locus_tag="VLA74_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HSF51853.1"
                     /translation="MAKDPICGMFVEENKNSIQHTTKDGIKYYFCSSQCLNEFLEPEK
                     ALKKLKIHVAISIALTIPIIILSLPHMIPQIGHFFPMEIMMEYTNYILLALATPIQFW
                     IGWRFYRGFWDGIKAKASNMDTLIAIGTTAAYLYSAIVTIVPGYFPFTAVYFETAAII
                     ITLILIGRLLETKTKEKASDAVRKLLDLKPRTAKVIRPVFREENEKEVSKKNNNNSHS
                     NNQNDLNFDNYKKLKSITKEFKEIEIPVEQIEEGDLMLIRPGERVPTDGLIIDGTSFV
                     DESALTGESIPVDKTKGDEVIGATINKNGLLKV"
BASE COUNT          916 a          334 c          343 g          778 t
ORIGIN      
        1 attattcttt agaacacgtt ttgattcact aaataaaaat tttaattcat catcagtaaa
       61 atccatatta taaaacatat gcgaatacac agcatcaaag taactattgg gaaaaggtag
      121 tccttgtatg gcatcaataa ttttcaaagt taatgaaaaa ttcttttctt ttgattttga
      181 acttaaattc tctattgcta ttttggacga atcaatagcg taaactttga atccttttga
      241 agcaaaaaat aaagagtctc taccttgacc acatcccaat tccaatattc ttttaacttt
      301 atgcttgaca agttcttcat agcacattaa agcaaaatta ctcggttctt caccaaaaaa
      361 agaggaatca ttcgaataaa ccttatccca gattttattc acaatacaat atatgtatat
      421 tgttacattt gatttctctg gagaataaga atttataaga tttcaataaa aatagtagtt
      481 attgattgat tctcatcaat attttcataa atatgcatat actataattt tctttgtatt
      541 tgtatctcta atatcaatag aatcgttatc aacacaatca cagactaatc ctgttcaata
      601 tgccatagta caatcattat ctttatcgac aaacacttta ctattaaatg ataattcaga
      661 gaaacaaaat aattctaaaa tgataaaagc ctttggacat tttgcaaata accaaataaa
      721 agatggtgtt gttacatgga ttcagggagg attttgggaa ttaacaataa acaacataac
      781 taatgatatt agtagtagta atcctaacaa taataacaat aatattctca tcaataacaa
      841 taatagtaaa gcagacttta ttgctaattt tacaatgata aaaccagatg gtagcctttc
      901 tcataatcac aatattggta actttatttc agataaggtc atatttactg acaaagatat
      961 agttgtaata ggaatagcag atatttattc tgatgataat aagaatgaat acaaaagtgt
     1021 tcctttaact attcatctta tgggcaaaaa agttttagga ctgactatag atgttagtaa
     1081 aactgaagga catttttcta gtccaaatga aatgtttgga acattaatta gtggtattgg
     1141 attggataca tctgctattg ataattctgt tcaaacaaag atgcaccata atactgcaac
     1201 aaatgatatt gtagaaaaag aatctatgac acttatgcag cattaagaag ataaaattta
     1261 ttgaaattgt aaattattaa aaaactctct tcgattatat ttgtattcaa taaaaatata
     1321 aaaggtaaag aaattgttat tctaccgtaa ctgttatctg ttgtttatat aatttacttt
     1381 ttagtattat catttacgtt tgtaaagtct tcatattaaa tatgtattta tctctatatc
     1441 atggcatggc gaaagatcca atatgtggaa tgtttgtgga agaaaacaaa aattctatac
     1501 aacatactac taaagatgga ataaaatact atttttgctc atcgcaatgt ttaaatgagt
     1561 tcctagaacc agagaaggca ttaaagaaat taaagataca tgttgctata agtattgcac
     1621 ttaccatacc aataatcata cttagcttac ctcatatgat tcctcaaata ggacatttct
     1681 ttccaatgga aataatgatg gaatatacaa attacatact tttggcttta gcaactccaa
     1741 tacaattctg gattggatgg cgtttttata gaggattttg ggatggaatt aaagctaaag
     1801 catctaacat ggatacacta atagctatag gaactacagc tgcctatctt tatagtgcaa
     1861 ttgtgactat tgttcctggt tattttccat ttactgctgt atattttgaa acagctgcaa
     1921 taataattac actcattcta attggacgac tacttgaaac aaaaaccaag gaaaaggctt
     1981 ccgatgctgt aagaaaatta cttgacttaa agccaaggac ggcgaaagta ataagacctg
     2041 tatttaggga agaaaatgag aaagaagtaa gcaaaaaaaa taacaacaat agccatagta
     2101 ataatcaaaa cgatctaaat tttgataatt ataaaaaatt aaaatcaata acaaaggaat
     2161 ttaaagaaat agaaattcca gtagaacaaa ttgaagaagg cgatctaatg cttattagac
     2221 ctggcgaacg agttccaaca gatggtttaa taattgatgg aacttctttt gttgacgaat
     2281 cagctttaac aggtgaaagt attccagtag acaagacaaa aggagatgag gtaataggtg
     2341 ctacaattaa caagaatggt cttcttaaag t
//
LOCUS       DATIAS010000690         2741 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1622524, whole genome shotgun sequence.
ACCESSION   DATIAS010000690 DATIAS010000000
VERSION     DATIAS010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1622524"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VLA74_13925"
     CDS             <1..733
                     /locus_tag="VLA74_13925"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HSF51854.1"
                     /translation="TKNKVPAGIAAWIATMEIIADVFVGTILALFAGIIALYNGAILI
                     GTIIILISSLIFGFWLIVVIFSAHYNIQLPKFMTKLIKRFLSQERADIIINYTNSAIS
                     DLCTMSRENFNSKRTIKIFFVGIVITFLAFACLGASFLVLGGLVESDLDLYKSILATA
                     ASTELGSLPITVGGSGLTELGLWAYVSGLDHLPSINDVLKDSHLDVIISWRIASYHIP
                     LVIMWILLMKLTIDKKITSGKNPQA"
     gene            complement(806..1243)
                     /locus_tag="VLA74_13930"
     CDS             complement(806..1243)
                     /locus_tag="VLA74_13930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51855.1"
                     /translation="MPRTKSSAKSSEKEAIPQWIEEEIKSIQFTESEKLNRTGYILEI
                     YKDDYKLDIQLYEALPDGRTIVEGIDVPSSQDISRFMKGFVYEFKIKMSRGKLSENAI
                     EFLKSQFMVDMDSIYQFELIELQLMDVESEENLQDALDDTDDS"
     gene            complement(1306..1917)
                     /gene="rnhA"
                     /locus_tag="VLA74_13935"
     CDS             complement(1306..1917)
                     /gene="rnhA"
                     /locus_tag="VLA74_13935"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF041175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HSF51856.1"
                     /translation="MHYDKYQIKNLYCKFDGMCQPVNPGGIACYGFIIQKKNNRVNKI
                     YEEAGIAIEPFSKESSNNVAEYVGLIKALEWLFNNSYNKSIICIQGDSQLIINQLCGK
                     YRVRSEKLMLYYERTKTLIKNFENLQIEWIARDKNKEADDLANKAYIDFIDKNYEHLY
                     NKLKPHFATDQQINLLRHLKINPSRYLSRIEANRFLKKYNEKK"
     gene            complement(1997..2557)
                     /locus_tag="VLA74_13940"
     CDS             complement(1997..2557)
                     /locus_tag="VLA74_13940"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSF51857.1"
                     /translation="MNEHDTLDKINSDIRNCKLCLLSNTRKNAVPGEGNFLKKLMIIG
                     EAPGYYEDQSGRPFIGAAGKILRNTLAKNKINIEDVFITNIVKCRPPNNRPPQINEKK
                     TCLQYLDRQIFLLKPKIICLLGNVASSYILGLKSITNERGKVIHKNGLKFFITYHPAA
                     TIYNRNLLNTFELDIKKLAEYVSKNF"
BASE COUNT          870 a          404 c          371 g         1096 t
ORIGIN      
        1 aacaaaaaac aaagttccag ctgggattgc agcttggatt gctacaatgg aaattattgc
       61 agatgttttt gtgggaacaa ttcttgcatt atttgcaggt ataatcgctc tttataatgg
      121 tgcaattctt atcggtacta ttataatcct tatttcttcg ttgatttttg gattctggtt
      181 aatagttgtt attttctcag cacattataa tattcaactt cccaagttta tgacaaaact
      241 aataaaaaga tttttgtcac aggaacgtgc agacataatt attaattata caaattctgc
      301 aattagcgat ttatgcacta tgagtagaga aaacttcaat tcaaaaagaa caataaaaat
      361 attctttgtt ggcatagtta ttactttttt ggcgtttgcg tgtcttggtg catcttttct
      421 tgtccttggg ggactagtag aatctgatct agatctatat aagtctattt tagctactgc
      481 agcttcaacc gaattaggaa gtttaccaat aacagtaggt ggatcaggat taactgaact
      541 cggattgtgg gcgtatgtct ctggtttgga tcatttgcca tcaataaatg atgtcttgaa
      601 agattcacat ttagatgtaa ttatttcttg gagaattgca tcttatcata ttcctcttgt
      661 aattatgtgg attttattaa tgaaacttac tatcgataaa aaaattacat caggaaaaaa
      721 tccacaagct tgatcactaa ttcttgttag ctgaaaaaac catatggtta atattgatga
      781 tctttacgat ttacttatat ttcaattatg aatcgtcggt atcatcaagt gcatcttgta
      841 agttttcttc agattcaaca tccattaatt gtaattcaat caattcaaat tgataaatag
      901 agtccatatc caccataaat tgtgatttaa gaaattctat ggcattttcg ctaagttttc
      961 cacgagacat tttaatcttg aactcataaa cgaatccctt cataaatcta gatatatctt
     1021 gagaggatgg aacatctatg ccttctacta tagtacggcc atcaggtaat gcttcataaa
     1081 gttgtatgtc taatttataa tcatctttgt aaatttctaa tatgtatccc gttcgattta
     1141 gtttttcaga ttctgtaaat tgtattgatt taatctcttc ttctatccat tgtgggatag
     1201 cttccttttc tgaagacttt gctgaactct ttgttcttgg cattcaaaat atacaataaa
     1261 caaactagat aaaagctttg catcaatgaa attaataaaa aaggttcatt ttttttcatt
     1321 atatttctta aggaatctat ttgcctcgat tcgacttaag tatctagaag gattaatttt
     1381 taaatgtctt aataaattaa tttgttgatc agttgcaaaa tgtggtttta atttgttata
     1441 taaatgctca taatttttat ctataaaatc aatatatgct ttatttgcta aatcatcagc
     1501 ttctttattc ttatctcttg ctatccattc tatctgaaga ttttcaaaat ttttaataag
     1561 tgttttagtt ctttcataat aaagcattaa tttttctgat cttactctat atttaccaca
     1621 aagctgatta ataattaatt gagaatctcc ttggatgcat attattgatt tgttataact
     1681 gttgttaaat aaccattcta atgcttttat taatcctaca tattctgcaa cgttattgct
     1741 agattccttg gaaaaaggct caatggcaat acctgcttct tcataaattt tattaactct
     1801 attatttttt ttttgaataa taaaaccata acatgctatc cctcctggat ttacaggttg
     1861 acacattcca tcaaatttac aatataaatt ttttatctga tatttgtcat aatgcatcaa
     1921 ttggtattgt tattagctat tattaaataa tagatcaaac tgctgattct tgatgattca
     1981 ataacttttt ttcaaactaa aaatttttag atacatattc tgcgagtttc tttatatcta
     2041 attcaaatgt atttagcaaa tttcgattat aaattgtagc tgcaggatga taagtaataa
     2101 aaaatttcaa gccattcttg tgtataactt ttcctctttc atttgtaata gacttaagac
     2161 ctaggatata ggaactcgcc acatttccca ataaacatat tatttttggt tttagtaaaa
     2221 agatttgtct atctaaatac tgtagacatg tttttttttc attaatttgt ggtggtctat
     2281 tatttggagg cctacatttt acaatattag taatgaatac atcttcaata tttatcttgt
     2341 tttttgctaa ggtatttctt aatatttttc cagcagcacc aataaaaggt cttcctgatt
     2401 gatcttcata ataacctgga gcctcaccta ttatcattaa tttctttaga aaatttcctt
     2461 caccaggaac agcatttttt ctcgtatttg ataataaaca taatttacaa tttctaatat
     2521 ctgaattaat tttatctaat gtatcatgtt cattcatgta caaatttaat tatcattatg
     2581 ggctttgtta atttaaggat aattggtata ttttcacaag agatagaatt ttgcttgttg
     2641 taatggtagt attatactat gaatgaacaa tcttaattgt atatgtgttg agaccaatac
     2701 tcttcttttt gtcgataaaa cgatagaaaa ttattacaac t
//
LOCUS       DATIAS010000691         2855 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1897692, whole genome shotgun sequence.
ACCESSION   DATIAS010000691 DATIAS010000000
VERSION     DATIAS010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897692"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            880..2037
                     /locus_tag="VLA74_13945"
     CDS             880..2037
                     /locus_tag="VLA74_13945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HSF51858.1"
                     /translation="MNNVCILGAGSTKYGKLDESVIEIALNASVDAIESAGISPHDIQ
                     AGYISNVFGVADKQVHMAPVIMSNLGISHVPGLTIESACGSGSIMFREAYANVRAGFY
                     DCVLALGVEKITHTGTNQSTTLFSYCSDVFYEGGNGASFPGLFASIARSYMTKFKADE
                     EDLANVAVKNHENGLLNPKAHVRKKITVDDVLNSPVVASPLKLYDCCPFSDGASAVII
                     CSEDFAKKSGKPYIQVIGSGRGGSPAAVQGRKDITTIPATVAAANQAYKMAGITAEDI
                     DFAEVHDCFTIAEIIDVEDLGFFQKGKAAKAISEGATYRKGKIPINPSGGLKSKGHPI
                     GATGVGQVVEVFEQFTGKSGERTIKDAQIALTHNFGATGASAAVHIFKKVD"
     gene            2045..2431
                     /locus_tag="VLA74_13950"
     CDS             2045..2431
                     /locus_tag="VLA74_13950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HSF51859.1"
                     /translation="MNNPVSGGVREKFITSAQNFKILARKCDNCGTIILETVLYCEKC
                     QGNKFTLIEYDGIGTVNTFTIHTVPPEGFEDVDSYAWVIFTLDNAPLRVSGFLPGIKQ
                     PADLPIGSKVRVNGFDKKHGLLLKKI"
     gene            2538..>2855
                     /locus_tag="VLA74_13955"
     CDS             2538..>2855
                     /locus_tag="VLA74_13955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51860.1"
                     /translation="MKPMDKYPLLKSRLDNASRVVNNQLTKLRMLDNRFNTLDTDLNN
                     KVIVNIKNGDNLRAKALANELANIRKIKNTTQKLLLSLEVIVIRFSTISEFAEILDTI
                     NPMI"
BASE COUNT          996 a          377 c          445 g         1037 t
ORIGIN      
        1 ataaaaaaat aattatttat gatctttatg gattatattc gataatatta gataacatat
       61 ctttgctcta tatattatta ttagatattt agattatttt tttaatagtt ttaatttatt
      121 taattctcaa ataagaactg attgagagta attatacaag acttatattg tgagttcaaa
      181 tatagcatat aaaacttaaa gtattacttt tttctgcata tataatatat tgcttattat
      241 aacaagcaaa ttattttatt attgttatta tcattatatt accattaatg tattaaataa
      301 tgagaaatta tatcatctat attctttttt tattcaatca atttataata ttttttgata
      361 tattttattt tatattaata aggataataa catcattata agtattaagc aaataatcaa
      421 ggtacaagat aaacaataaa actagcagct acaattccaa taacgatcag tgttgttata
      481 ataatgcctt ttttcgtaac ttttttttta gtttctgtat ttctattcaa actaactaat
      541 gtaaatgatt tatctattta ttgtttttta tttttaaaaa acgaagataa aatctattaa
      601 tatttgggtt tttttctaat tcttctttct aattttgctt ccttcttact acgatatctc
      661 ttctcactat atgcatgagt ctttttaaat gcctttttca ttctttttaa tattttataa
      721 ttctttataa atacttattt tttaatagta taattctaca gattattaaa tgaccataat
      781 caaatttgat ttattttaag ttttatatta catatcaaat cctattttta tttatctcag
      841 ctgtctaacc tttttatacg actcacaata atttatgttg tgaataatgt ctgtattttg
      901 ggagctggta gtactaaata tggtaagctc gatgaaagcg ttatagaaat agctcttaat
      961 gcatctgtcg atgcaattga atctgcagga atttcacctc atgatattca agcaggttat
     1021 atttcaaacg tttttggagt agcagataaa caagtacata tggctccagt tattatgagt
     1081 aatttaggaa tatcacatgt tcctggattg actattgaat cagcatgtgg ttcaggatca
     1141 ataatgttta gggaagcgta tgcaaatgtt cgtgctggtt tttatgattg tgttttggct
     1201 ttaggtgtag aaaaaataac tcatactgga acaaatcaga gtacaactct tttctcatac
     1261 tgttctgatg ttttttacga aggtggtaat ggtgcttctt ttccaggttt atttgcatca
     1321 attgcaagat cttatatgac taagtttaaa gcagatgaag aagatctagc aaatgtagca
     1381 gtaaaaaatc atgaaaatgg cttactaaat cctaaggctc atgtacgcaa gaaaattact
     1441 gttgatgatg ttcttaattc acctgtagtt gcttctccat taaaactata tgattgttgt
     1501 cctttctcag atggtgcctc tgcagtcatt atatgtagtg aagattttgc aaagaaaagt
     1561 ggaaagccat atattcaagt tattgggtca ggacgaggtg gatctcctgc tgctgttcaa
     1621 ggtagaaaag atataactac tatcccagct acagttgctg ctgctaatca agcctataaa
     1681 atggctggta taactgcaga agacatagat tttgctgaag ttcatgattg ttttacaatt
     1741 gcagagataa ttgatgtaga agatctagga ttttttcaaa aagggaaagc ggctaaagca
     1801 attagtgaag gtgcaaccta tagaaaaggg aaaattccaa ttaacccatc tggaggattg
     1861 aagtctaaag gtcatcctat tggagccaca ggagtaggac aagttgttga agtttttgaa
     1921 caatttactg gaaaatctgg agaaagaaca ataaaagatg cacaaattgc tttaactcac
     1981 aattttggtg caacaggagc aagtgccgca gtccatatat ttaaaaaggt ggattgatat
     2041 tacattgaac aatcctgtaa gcggaggagt gagagaaaaa tttatcactt ctgcacagaa
     2101 ttttaaaatc ctagcaagga aatgtgataa ttgtgggact ataattctcg aaacggttct
     2161 atattgtgaa aaatgtcaag gcaataaatt tactttaata gaatatgatg gtataggtac
     2221 tgtaaatact tttactattc ataccgttcc tccagaggga tttgaggatg tagatagtta
     2281 tgcatgggta atatttactc tagataatgc tccacttcga gtatctggat ttctaccagg
     2341 aattaaacaa cctgctgatc ttcctatcgg atcaaaagtt agagtaaatg gatttgacaa
     2401 aaaacatggg ctgcttttga aaaaaattta atctaattcg ataacttttt agaattattg
     2461 cttaactatt aactaagctt tcgaaaatca atttgtctag atagattaac tctaacctta
     2521 acattctaaa atttactatg aaacccatgg ataagtatcc tctgttaaaa tcaagactag
     2581 ataatgcaag tagagttgtt aacaatcaac ttacaaaact gcgaatgctt gataatagat
     2641 ttaatacttt ggatactgat ttaaataata aagtaattgt aaatataaaa aatggcgata
     2701 atttacgtgc aaaagcatta gcaaacgaat tggcaaatat tagaaaaata aaaaatacaa
     2761 ctcaaaaact attattgagt ttagaagtaa tagtaataag attttccaca atatctgaat
     2821 ttgctgaaat ccttgatact attaatccaa tgatt
//
LOCUS       DATIAS010000692         3289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1487883, whole genome shotgun sequence.
ACCESSION   DATIAS010000692 DATIAS010000000
VERSION     DATIAS010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3289
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487883"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            322..783
                     /locus_tag="VLA74_13960"
     CDS             322..783
                     /locus_tag="VLA74_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSF51861.1"
                     /translation="MQRFDELDMKILTELTRDASISVPQLSKNLNINSSVLYSRIKRL
                     SKRNLIKKFSIVVNENMLGLNIKATVGINRDPKRKDTIHRELLMIPEVRSLSEVTGRF
                     DMIVNINASTLEELHNIVIERIGKIDGIQNTETFVEMQRTEKDPDYSKQVS"
     gene            898..1080
                     /locus_tag="VLA74_13965"
     CDS             898..1080
                     /locus_tag="VLA74_13965"
                     /inference="COORDINATES: protein motif:HMM:TIGR00327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase SEC61 complex subunit gamma"
                     /protein_id="HSF51862.1"
                     /translation="MQNIFLSLKRRLLDMYQTLLLAKKTSKDDYTTHMKFVLLGMGVV
                     GGIGFTIKLIGEFLNS"
     gene            1405..1770
                     /locus_tag="VLA74_13970"
     CDS             1405..1770
                     /locus_tag="VLA74_13970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51863.1"
                     /translation="MEEKKEIYIQLEKNEIEPNTEVHGRVGLNYNGRFDTIVINSQIE
                     NSSDVFTYTQLNGKRIHHPYARLSIFKKDLEGKNIIEFIVISHHVPSKDFSRVKFRTS
                     IIQEHKEVANDIIFLKIKK"
     gene            complement(1786..2259)
                     /locus_tag="VLA74_13975"
     CDS             complement(1786..2259)
                     /locus_tag="VLA74_13975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSF51864.1"
                     /translation="MERSQQTNIGGLTIIFFIIAIAISFAFYQFVFLKEINLKPTVSE
                     EIANPAGSLKLTIAEGAGLPTNPQFYVPADARATLGEDNKVIWENQDSTAHTVTTDND
                     YEDPLSGKFDSMETIGLVSPGGTFEFVFTEDGEYPYHCEPHPWMTGKVTVVKSFS"
     gene            complement(2323..>3289)
                     /locus_tag="VLA74_13980"
     CDS             complement(2323..>3289)
                     /locus_tag="VLA74_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51865.1"
                     /translation="PIALVGLMTVHFPRFLVFDVPMVMAITGAIMITGGVFPVEMGLK
                     FDPNVPPGITVPEWYLTGLYAFLRSQYDKFVTGVAWPGLFIFTLLIIPFIDKYKKFSW
                     KDRPIISAIGITSIAQIVVTTYWGFYIDPDRTKSLLERLVIDPIFLYSVMLALVPLSF
                     GFTYLMIKLAKNAEANAKRQPKKTENPITLPEKWIYFVFIALIGFQIYLNIAAYYALL
                     AGMKNISLFIIGIIMLVFAGMFHIYRHGRSVANNPPPPSIQYMDKIKSLQHRKTPLDE
                     GEEKPKLASSSENVLNQIKSNGLLSKVFKIASKNKNSFEKMWSKD"
BASE COUNT         1206 a          481 c          474 g         1128 t
ORIGIN      
        1 gatcctaata tggacagtaa atttttatca acggattgta ccctccccaa tataatttta
       61 ttatattcgt tttctttttc tactgcaaaa acataatccc cactcttaat ctttccaaat
      121 ccaaacatta ttcgatgtta aaagctaaat tatatattat ttactatatc tgtaagtctt
      181 ataaaaaaaa acttaattat tttaatatat tagcttcaca ttgcaaaaaa tatctaaaaa
      241 tattaaatat tttaaattta atttgtttaa tataattaca tttattaatc tagatttata
      301 atcgtattgc gaagataaaa cttgcaaaga tttgatgaac ttgatatgaa aattctcacc
      361 gagcttactc gagatgctag tatctctgtt ccccagttaa gtaaaaatct gaatattaat
      421 tcatctgttt tatatagtag aatcaaacgt ctttcaaaaa gaaatctaat taaaaaattt
      481 tctatagtag taaatgagaa tatgttaggt cttaatatca aagctacagt aggaattaat
      541 cgtgatccaa aaaggaaaga tactatacat cgagaattgc tcatgattcc tgaagtaagg
      601 tcattatctg aagttacagg tagatttgat atgattgtaa atattaatgc cagtacatta
      661 gaggaattgc acaatattgt aattgagaga attggtaaaa ttgatggaat tcaaaatact
      721 gaaacttttg ttgaaatgca aagaactgaa aaagatcctg attattcaaa acaagtatct
      781 taatttaaaa ttttcctaag caatttttac caaaagttga tttataaata gataaattca
      841 aatacaataa atagaattat aataaaatac tttcaaatgc aaaataaata ctttcaaatg
      901 caaaatatat tcttatcttt aaaaagacga ttactagata tgtatcaaac tctattgtta
      961 gcaaagaaaa catccaagga tgactatact acacatatga aatttgtatt attagggatg
     1021 ggcgtagttg gaggaattgg atttactatc aagctcatag gagaattctt aaattcttaa
     1081 tataaacaat agaaatataa aataattatt tttcaaaata aaatttaata atggatttag
     1141 agatagcctg aaaataatat acgggcccgg agggcttcga tccctcgact tccggctatc
     1201 ttcttatatt aaatagaagg caggcgctct atccatgctg agctacgagc ccttcaaaac
     1261 tgaagaaact taaacagatt taaagattat cgtttaaaat atgtatatga gattattatt
     1321 attattattt ttgtattaca agttctatta gactttataa tgtgattaat tatatagaaa
     1381 ctattatcaa tatcttgtat aattatggaa gagaagaagg aaatatatat tcagttagaa
     1441 aaaaatgaaa tagagcctaa tactgaagtt catggtagag taggattgaa ttataatgga
     1501 agatttgata ctatagtaat aaattctcaa attgaaaatt caagtgatgt cttcacttat
     1561 actcaattaa atggaaaaag aattcatcat ccatatgccc gactttcaat ctttaaaaaa
     1621 gacttagaag gaaaaaatat aatagaattt attgtaatat ctcaccatgt accatcaaaa
     1681 gatttttcca gagttaaatt tagaacatcc ataattcaag aacataaaga agtggcaaat
     1741 gatattatat ttttaaaaat aaaaaaatag tataatatga taatgctatg agaaactctt
     1801 tactacagtt accttaccgg tcatccaagg atgaggttca caatgataag gatattctcc
     1861 atcttcagtg aatacaaatt caaatgtccc tccaggtgaa acaagaccta ttgtctccat
     1921 agaatcaaat tttccagata aaggatcctc atagtcatta tcagtagtta cagtatgagc
     1981 tgttgaatcc tggttttccc aaataacttt attatcctca cctaacgttg ctcttgcatc
     2041 agctggaaca taaaattgag gattagttgg aagacctgcc ccctcagcaa tggttaactt
     2101 taatgatcct gcaggattag caatttcttc tgaaacggtt ggtttgagat ttatttcttt
     2161 aagaaataca aattgataga atgcaaagct aattgctatt gctatgataa aaaatataat
     2221 agttaaaccg cctatatttg tctgttgtga cctttccata cttctacata cttccttcgt
     2281 agattagtta atttaatttt tctatttttg ttttatctgc tattaatctt tactccacat
     2341 tttttcaaat gagtttttat ttttacttgc aattttaaag actttgctca ataatccatt
     2401 actcttaatt tgatttaata cattttcaga agatgacgct aattttggtt tttcttcacc
     2461 ttcatctaat ggagtttttc tatgctgtaa tgattttatt ttatccatat attgtataga
     2521 tggaggcgga ggattattgg caaccgatcg tccatgtctg tatatatgga acatgcctgc
     2581 aaatactagc ataataattc caataatgaa taaagatatg ttcttcattc ctgcaagtag
     2641 agcataatat gctgcaatat tcaaatatat ttgaaatcct attaatgcta taaagacaaa
     2701 atatatccat ttttcaggaa gggttattgg attttcagtt tttttaggtt gacgtttagc
     2761 atttgcttct gcatttttgg ccaattttat cattagatat gtaaatccaa aggataaagg
     2821 aactaaagca agcattacac tatagagaaa gataggatca ataaccaatc tttctaagag
     2881 agattttgtt ctatcaggat cgatatagaa tccccaatat gtggttacta caatttgggc
     2941 aatacttgta attcctattg cggaaatgat tggtctatcc ttccatgaaa atttcttata
     3001 tttatctatg aaaggtatta ttaataatgt aaaaatgaag agacctggcc atgcaacacc
     3061 tgtaacaaat ttgtcatact gagatcgaag gaaagcatat agaccagtaa gataccattc
     3121 tggtaccgta ataccaggtg gaacattagg atcaaatttt aagcccattt caacaggaaa
     3181 taccccgcca gtaatcatta ttgctccagt aatagccatt accattggaa catcaaaaac
     3241 aagaaatcgt gggaaatgta ctgtcatcaa gcctactaac gctattggg
//
LOCUS       DATIAS010000693         2020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1897852, whole genome shotgun sequence.
ACCESSION   DATIAS010000693 DATIAS010000000
VERSION     DATIAS010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897852"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VLA74_13985"
     CDS             <1..677
                     /locus_tag="VLA74_13985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51866.1"
                     /translation="KKKVKTLYEYSHSIHFTDSVLGIPRISSITMANIIKKYNDRIKI
                     SCSIRTRDRNLTSMYQIISDSILYNIESLLILLGDQPRNDLEAHNLLKPSKVVNLLNS
                     QGFKKSIKLNLSIPNKIRNINNTIQRKIDAKPYAFVTQSIESLKDLQNIIDLIRPFDI
                     KVIPCIMLPSQKNKRSAELIGLNWQEYEKEPIEFIRNCGRIADEILLTSPNHFALATE
                     ILKELR"
     gene            complement(669..1463)
                     /locus_tag="VLA74_13990"
     CDS             complement(669..1463)
                     /locus_tag="VLA74_13990"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSF51867.1"
                     /translation="MVKLEIKNVTKSFYRNDGKQSMLINAIENINLSVNDGEFICIVG
                     PSGCGKSTLLNILAGLDNPTQGQVILNGRQITGTGPDRIMVFQENALFPWMKVIDNVE
                     FGLKIAKVEKLKRREIAMQYLDMMQLKKFAEAYVYQLSGGMKQRVSIARALVLDPEVL
                     LMDEPFAALDSQTRDLLLVELQLIWAKTKKTIIFVTHNIIESVCLGDRVIVFTNRPGK
                     IKKDVKIEHRRPRLTEDDSLKDFQRQVLYELKSEIVHSRKEKSDLS"
     gene            complement(1771..>2020)
                     /locus_tag="VLA74_13995"
     CDS             complement(1771..>2020)
                     /locus_tag="VLA74_13995"
                     /inference="COORDINATES: protein motif:HMM:NF014103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51868.1"
                     /translation="KNDKKNKQIKQIFNISLEELDNIPYYFSVDEIGSMLKASPKKLN
                     EIIDKIISSGYLASRTIFRSTGLKTNASMSNILSILKN"
BASE COUNT          729 a          305 c          255 g          731 t
ORIGIN      
        1 ttaaaaaaaa ggtaaaaaca ctttatgaat atagccattc tattcatttc actgattcag
       61 tactaggaat tccaaggatc tcaagtatta ctatggctaa cataataaaa aaatataatg
      121 atagaataaa gatttcatgt agtataagaa caagagatag aaatttgaca tcgatgtatc
      181 aaattatttc tgattcaata ttgtataata ttgagagttt acttatatta cttggagatc
      241 agcctagaaa cgatttagaa gctcacaatc tattaaaacc gagtaaagta gttaatttgc
      301 tcaattctca agggtttaaa aaatctataa aactaaatct atcaattcca aataaaataa
      361 gaaatattaa taatactatc caaagaaaga ttgatgcaaa accttatgcc ttcgtaactc
      421 aatctattga atcattaaaa gatctacaga atataataga tctaattagg ccttttgata
      481 ttaaggtaat cccatgtata atgcttcctt cacaaaagaa taaaaggtca gcagagctaa
      541 taggcctaaa ttggcaagaa tatgaaaaag aacctataga atttattaga aattgtggca
      601 ggattgcaga tgagatttta ctaacttcgc caaatcattt tgcattggca acagaaatat
      661 taaaagagtt aagataaatc actcttttct tttcgggaat gaacaatctc tgattttaat
      721 tcataaagaa cctgtctttg aaaatcttta aggctatcgt cttctgttag cctaggtctt
      781 ctatgttcga tttttacatc tttttttatt tttcctggtc tattagtaaa tactatgact
      841 ctatcaccca gacaaacaga ttctatgata ttatgtgtaa caaaaataat tgtttttttt
      901 gttttagccc aaattaattg taattcaact aataataaat cacgagtttg agaatccaat
      961 gcagcaaagg gttcatccat cagtaatact tcggggtcca aaaccaaagc tcgtgctatt
     1021 gaaactcttt gtttcatacc tccagaaagt tgatatacgt atgcttctgc aaattttttt
     1081 aattgcatca tatctagata ttgcattgct atttctctcc tctttagttt ttcaacttta
     1141 gctattttta atccgaattc tacattatct atcactttca tccaaggaaa caaagcattc
     1201 tcttggaaaa ccattattct atctggtcca gttccagtaa tttgtcgacc atttaatatt
     1261 acctgtcctt gtgttggatt atccaatcct gccaatatgt tgagaagagt agactttccg
     1321 catccagatg ggcctacaat acaaatgaat tcaccatcat ttacggatag attaatattt
     1381 tcaattgcat taattagcat ggattgtttt ccatcatttc tgtagaatga tttagtaacg
     1441 ttttttattt ctaatttaac cattaaaata taccaccaca attatagata ccttctttaa
     1501 atttctgaat gtaaaatcac aatatctaaa gatatagaga aacaataaga taaaatattt
     1561 aaatgatagg taattatact tcaagctctt atgacataat ttaccattat tattatcagt
     1621 gtaaaagaaa ttataattat cataaaaata catgattttc attgttatat gataaatgaa
     1681 attacttctc tccaattttt gaaataattt acttaaaaag caatataaat aatagcatta
     1741 gagtttaatt atttctaaga atttaacagc ctaattcttt agtattgata aaatattaga
     1801 cattgaagca ttggttttca agcctgtaga acgaaaaatt gttcttgatg caagataacc
     1861 tgaactaatt attttatcaa taatctcatt taatttttta ggactagctt taagcataga
     1921 acctatttca tctactgaaa agtaatatgg aatattatct agttcctcta aactaatatt
     1981 gaatatttgt ttaatttgtt tattcttttt atcattcttt
//
LOCUS       DATIAS010000694         4769 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1217117, whole genome shotgun sequence.
ACCESSION   DATIAS010000694 DATIAS010000000
VERSION     DATIAS010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217117"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..304
                     /locus_tag="VLA74_14000"
     CDS             101..304
                     /locus_tag="VLA74_14000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51869.1"
                     /translation="MSNSAISNLNSSPNDKNWKQIWQLGNKHLVVIDESIIQKLGIND
                     NLTTFVEQELTDEGILMRIRRFN"
     gene            307..798
                     /locus_tag="VLA74_14005"
     CDS             307..798
                     /locus_tag="VLA74_14005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51870.1"
                     /translation="MSFNSIQPNLISTNRYTRSALTDRIKKILATRKLNIEEYINNIE
                     RHKKNRDPITYYFDYYQELDFSINTKDPKSIESKIYDDRLYYYKAHQYLKIGLFLKND
                     APAFKVKLEDLTSEIIYELSLLDQKDRRYVLKQAVARIFEDINFNLYHDSVSANLKVI
                     LVR"
     gene            795..2762
                     /locus_tag="VLA74_14010"
     CDS             795..2762
                     /locus_tag="VLA74_14010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51871.1"
                     /translation="MTVNSNNNNNNNKINDLDSLKEQILIDQEKDIEKQKQSHKINQD
                     NIVIDDERDLKSKILNYGFADFVIKTIKKTVKREDSLIRQLFYTGLSAYSNKPINIGI
                     KAPTSEGKTYVVKEVVMKFFPKKDVWIIGSMSPKVIIRQKGKLVDGDANELLEPKIRE
                     LKKQISSTKDAETKENLQEQLQELLDNSKMVIDLSDKIFVFLEPPHPQTWEILKAILS
                     HDAWEIEHPFVDKTEYLGTQVKRVVTLGWSVCIFCSARDESKWEIWPEIQSRCLITSP
                     NMSIEKYQESNLLTAQTMSLPDDIQQKVIVSDGEIELAKKCVLFLKQQILKFSRGEKE
                     YQEQKNNHLDLDSRKKSNPVWVPYGQILGEVLPAEKGSDMRIQQRLFSLLNIIPLAKI
                     DSRKRLFDGNQEMVIANLEDLAEVLHITQNISGIPSYKIKFYREIFLPLIRSKNKKDE
                     KDGKEEKIIAVTTKELADYYKEKRGKAISTDNLRKTFLVELINNDYIGELKSELDSRQ
                     FIYYPLIEFEDSEIMQFNLTKEETDDRDISKISNSSRFDNYLHVSPIKIPKYCKTIPQ
                     DWLIYEILSLAKYRIDLDNFVGPLADYLNTHEKFQLKDVKGNKLKVKDFVKEYEKNLP
                     LSRYIFKPEISNYHSNIFGDIKLLQLNQSRS"
     gene            3337..4506
                     /locus_tag="VLA74_14015"
     CDS             3337..4506
                     /locus_tag="VLA74_14015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51872.1"
                     /translation="MTTLQKYLLTLLSTNNIEKTVDSNLDYPINTILEYIAMNPSSST
                     YDCQKYLNYSDCLQDYESVEVQIHNLIKLGLIQNVSTLDQKTKNSIEEDESDREKPKN
                     SRICYSISSAGIFYLFKTNPETINMELILSNKDDGLFINFLYPFLEFNTLKKIKHRGT
                     LTHIIRLLNRFCETIQTELEILRSVDENGGETDTLGYVDGLGTSEYSYKFYGLREFLQ
                     NLKNSSKIKWLDIDNTKIIEIQKAKLFKIRDNKNNELILELYPERKVAMLSDKNQRIK
                     KLSLKKDPYCYGIYNISYFNRIRVEDYIEKRFKDKHSYIDYNIDNYISEFCSFMLEYM
                     SNGNNMIPEEQRMTKRQDCIAIAKDKNFQEILSSFKQNFDSRYDGFIKLSNVQQI"
BASE COUNT         1953 a          640 c          737 g         1439 t
ORIGIN      
        1 aaggaaaatt gaatagttta caacaatccc ttggagttcc cgcccctgag attgttgtaa
       61 acggtgagca aacctacact aaggtggtgg aggattgcca atgagtaatt cagcaatctc
      121 aaatttaaac agttctccta atgacaaaaa ttggaaacag atatggcagt taggcaataa
      181 acatttagtt gtcattgatg aatctataat ccaaaagtta ggtatcaatg ataatttaac
      241 aacctttgta gaacaagaac taacagatga gggaatattg atgcgaataa ggagattcaa
      301 ctgaaaatgt cctttaatag catacaacct aatttaattt caacaaatcg atatactaga
      361 tctgcattaa ctgacagaat aaaaaagata ttagcaacta gaaaattaaa tattgaagaa
      421 tatataaaca atatagagag gcataaaaaa aatagagatc caattacata ttattttgac
      481 tattatcaag aattagattt ttctattaat actaaagacc caaaaagtat tgaaagtaaa
      541 atttatgatg atagattata ttattacaaa gcacatcaat atctaaaaat aggcttattc
      601 cttaaaaatg atgcacctgc ttttaaagta aaacttgaag atcttacatc agaaataatt
      661 tatgagttaa gtctattgga tcaaaaggat agaaggtatg tcttaaaaca ggcggtagct
      721 cgtatatttg aagatatcaa ttttaatctc tatcatgatt ctgtttctgc taaccttaag
      781 gtgattcttg taagatgact gttaattcta ataataataa taataacaat aaaataaatg
      841 atttagacag tttgaaagaa caaatcctaa tagatcaaga gaaagatata gaaaaacaaa
      901 aacagtctca taagattaat caagataata tagtaataga tgatgaacgg gatttaaaat
      961 ctaaaatcct gaattatggt tttgctgact ttgtaatcaa gacaataaaa aagacggtaa
     1021 aaagagaaga ttccctcata agacaattat tttacacagg tttgagtgca tactctaaca
     1081 aaccaatcaa cataggaata aaagcaccta caagtgaagg caagacatat gtggtaaaag
     1141 aagtagtaat gaagtttttt ccaaaaaaag atgtatggat aattgggtct atgtcgccta
     1201 aagttataat tagacaaaaa gggaaacttg tagacggtga tgccaatgaa ttattggaac
     1261 caaaaataag agaattaaaa aaacaaattt cttcaacaaa agacgcagag acaaaagaaa
     1321 acctgcaaga acaattacaa gagctattgg ataattcaaa gatggttatt gatctttctg
     1381 acaagatttt tgtttttctt gagcctccgc atcctcaaac ttgggaaatc ctaaaggcta
     1441 tactttccca tgatgcatgg gaaattgagc atccattcgt tgacaagaca gaatatttgg
     1501 gaacgcaggt aaagagagta gtaactttgg gatggtcggt ctgtatcttc tgttcagcaa
     1561 gggatgaatc aaaatgggaa atatggccag aaatacaaag cagatgtttg attacatctc
     1621 caaacatgtc tattgaaaaa tatcaagaat ccaaccttct gactgctcaa acaatgagtc
     1681 ttccagatga cattcaacag aaggttattg tatcagacgg agaaattgaa ttggcaaaga
     1741 aatgtgtttt gtttcttaag caacaaatcc ttaaattctc aagaggagaa aaggaatatc
     1801 aagaacaaaa aaataaccat ttagatcttg actctagaaa gaaatccaat ccagtctggg
     1861 ttccatatgg ccagatacta ggcgaagtgt tacctgcaga aaaaggtagt gatatgcgca
     1921 tccaacaaag attattttct ctactgaata tcattccact agcaaagata gattctagaa
     1981 aaaggttatt cgatggtaat caagaaatgg tgattgcaaa tctagaagac ttggcagagg
     2041 ttttacatat aactcaaaat attagtggaa ttccttcata caaaatcaaa ttttatagag
     2101 agatatttct tccactaata cggtctaaaa ataaaaaaga tgaaaaggat gggaaagaag
     2161 agaagataat tgcagtaacc acaaaagagt tagcagatta ttacaaagag aaaagaggca
     2221 aggctatatc tacggataat ttaagaaaaa catttctcgt agaactaata aataatgatt
     2281 atataggtga attaaaatct gaactggatt ctagacaatt catatattat cctttaatag
     2341 aatttgagga ttcagaaata atgcaattca atcttacaaa agaagaaacg gatgataggg
     2401 atatatcgaa aatatcgaat tcatctcgat tcgataatta tttacatgtt tctccaataa
     2461 aaattccaaa atattgtaaa actataccac aagattggtt aatttatgaa atattgagcc
     2521 ttgccaaata tcgaattgat ttagataatt ttgttggtcc tttagccgat tatttgaata
     2581 ctcatgaaaa gtttcagtta aaagatgtta agggtaataa attaaaggta aaggattttg
     2641 ttaaagaata cgaaaaaaac ctaccgttga gtcgatatat ttttaaacca gaaatttcta
     2701 attatcacag caacatattc ggagatataa aattattaca actaaaccaa agtagaagtt
     2761 gagaaaatta acgaatctct ctaaattcga taatttcgat atctttctta acaattcatt
     2821 aatttgcaaa tatgagcttt gaattggtag ttataatatg ctgctaaaat ttttaaacat
     2881 aacaatagat ataaaaatac tcattgttgg ttctggaaga attataatct aaagatgata
     2941 aatggtttat gatgaaacat ctttactata ataacaaaca gaataaagtc aaaatagaaa
     3001 ctggctatag ataaactaac caaagataaa aaaattataa catatacatt tagagaatct
     3061 atatagaacc acttaaacct tgacatagct aaaataataa ctagaagaag attccttttc
     3121 aaaagaacag tcattcttaa aaagattgaa tgtctttaac cttctttatc ttatgtatat
     3181 tataagaaag caattattag attcttataa ttaacttaca agtaattact tagtctaaga
     3241 actatgtttt tagatcaact cattcactgg tttcatatat ttaaatgttt ctataatatg
     3301 ggaacatata aatatactat aagatatata ttttttatga ctactctcca aaaatatcta
     3361 ttaactctcc tttctactaa taatatagaa aagacagttg attcaaatct agactatcca
     3421 ataaatacga tacttgaata tatcgcaatg aatccctcat cttctacata tgattgtcaa
     3481 aaatatttga actatagtga ttgcctacaa gattatgaaa gtgtagaggt acaaatacac
     3541 aatttaatta aattaggatt gattcaaaat gtttcaactc ttgatcagaa aaccaagaat
     3601 tcgatagaag aagatgaatc tgatagagaa aaaccaaaaa atagtagaat atgttattcg
     3661 atatcatctg caggaatatt ttacttgttc aaaacaaatc cagagaccat aaatatggaa
     3721 ctgatattgt caaacaaaga tgatggacta ttcatcaact ttctctatcc atttttggaa
     3781 tttaacactt taaaaaaaat aaaacatcgc ggaacattaa cacatattat cagattgttg
     3841 aaccgatttt gtgagaccat tcagacagag ctagaaattt tacgaagtgt agacgaaaat
     3901 ggaggagaaa ctgacacgct tgggtatgta gatggtttag gaacttctga atattcttat
     3961 aaattttatg gtttgagaga atttttacaa aacttaaaaa atagttctaa gataaagtgg
     4021 ttagatatag ataatacaaa aataatagag atccaaaaag ccaagctctt caaaattcgt
     4081 gataacaaaa ataatgaatt aatcttggag ttatatccag aaagaaaggt agcaatgttg
     4141 tcagataaaa atcaaagaat aaaaaagcta agtcttaaaa aggatcccta ttgctatggg
     4201 atttataaca tatcatattt taatcgtata agggtagaag actatattga aaaaaggttt
     4261 aaagataaac actcttacat tgactataat atagataatt atatttcaga attctgcagt
     4321 tttatgttgg aatacatgag taacggaaat aatatgatac ctgaggaaca aagaatgaca
     4381 aaaagacaag actgcatagc cattgcaaaa gataaaaact ttcaagagat tttgagttcc
     4441 ttcaagcaaa attttgattc tcgttatgat ggttttataa agttaagcaa tgtacaacaa
     4501 atttagacta ttcatcttgt acaaaaactg tttcatattc aatataacaa tgatttaaaa
     4561 ttaagttaca ataagataaa tgacattgta atagtcttta ttacattata tcattataaa
     4621 gacacaaata gaaaagtaaa tgcataaagc taacctttcc cttattaata ctatatcgtg
     4681 aatccatatt tatattatga caagatgttt atcaatatca acatgagctc attcaagatc
     4741 attgttgctg gatctaaaaa acagatgtt
//
LOCUS       DATIAS010000695         2812 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1080172, whole genome shotgun sequence.
ACCESSION   DATIAS010000695 DATIAS010000000
VERSION     DATIAS010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080172"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VLA74_14020"
     CDS             <1..724
                     /locus_tag="VLA74_14020"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSF51873.1"
                     /translation="NDQPFKLVYASPSFENDNEDIVFGVLIYKVNKNYKPNPVSIKST
                     INTNDTKDKESNKADEKSENVNADMTPLDSVAILKTSIGNITIEFFPKAAPKHVNSFL
                     NLSKTGFYDGTIFHRIVKDFVIQGGDPNTKDNTQSRDRWGTGGPNYTIDAEFNDIPHE
                     RGILSMARTADPNSAGSQFFIVTKDSKFLDNQYTVFGRVIDGMELVDKIASLNTNPSD
                     QPIDADKAKIEKIIIENRTEIT"
     gene            763..1137
                     /locus_tag="VLA74_14025"
     CDS             763..1137
                     /locus_tag="VLA74_14025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51874.1"
                     /translation="MNELESLLLNPQRKLLVTYKEIDLTDNSSFNQIFILLIEESKGS
                     AGGRGGGSGYRKIAEIIGFRIENNNIEKFYDTKEEDLIELFEVPYSAVAMDIKLSDGK
                     QIVVQGVIDPDMVTNYNNIITS"
     gene            1427..>2812
                     /locus_tag="VLA74_14030"
     CDS             1427..>2812
                     /locus_tag="VLA74_14030"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF003218.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase VI subunit B"
                     /protein_id="HSF51875.1"
                     /translation="MKINPKLELKYQKRKKDNITTTAANNQINKKAKIKYNKKAESEF
                     FVDNSALAGFTGERILYMAVRELIENSLDACEFHHILPNISISMNNIDAENDLWTISC
                     EDNGVGIISEKVPVAVCSFLTSGKYVEKQQRGLFGVGLKMIAAFSTKDTDKPIRVWSK
                     SVEEDLEYYYELRTDITTNKPIVLNKKPLTKTDKQIRDKHGFKIIATLRARLSPITKN
                     KIYDYISQTSIVNPYANLIFENDDGKITFERRTEIMPHPAQEVLPHPAEMDLQTLKKA
                     ILNFSNQKITIQSVLSCSFQKLSIEKAREIISISQIENKSANLFSESDLIKIVNACKQ
                     MKFQSPNTDHLSPIGEQILTTGMMSEYIIVNNKDQNKTVSHGGNGHNLNVRVLKPVFT
                     SYSSRSTVISNRPTIIECGIAYGGNINSFKLYRFANKIPLLYDEGSDVAREVVSEVGI
                     NKMGITKKEAKE"
BASE COUNT         1149 a          377 c          436 g          850 t
ORIGIN      
        1 aaatgatcaa ccatttaaat tagtatatgc ctctcctagt ttcgaaaatg ataatgaaga
       61 catcgttttt ggagtactaa tttataaggt taataaaaat tacaaaccta atcctgtttc
      121 aataaaatca actataaata caaatgatac aaaagacaaa gaatcaaata aagcagatga
      181 aaaaagtgaa aatgtgaatg ctgatatgac tcctttagat agtgttgcaa ttttaaaaac
      241 ttctattgga aacattacaa tagaattttt cccaaaagcc gctcctaaac atgtaaatag
      301 ttttctaaat ctttcaaaaa caggtttcta tgatggaact atttttcatc gaatagtaaa
      361 agattttgtt attcagggag gagatccaaa tactaaggat aacactcaga gtagagatag
      421 atggggtaca ggaggaccca attataccat tgatgcagaa tttaatgata ttccacatga
      481 aagaggaata ctatctatgg ctaggactgc tgatcccaac agtgcaggat ctcaattttt
      541 tatagtaact aaagattcaa aattcttaga caatcaatat actgttttcg gaagagtaat
      601 agatggaatg gagttagtag ataaaatagc atcactaaat acaaatcctt ctgaccaacc
      661 aatagatgca gacaaagcaa aaattgaaaa aatcataata gaaaatagaa ctgagattac
      721 ataatgaaaa agacagtaac tttagagatt taagcataat ctatgaatga attagaatct
      781 cttttattga acccacaaag aaaactttta gtaacatata aagaaataga tttaacagat
      841 aattcatctt ttaatcaaat ctttatttta ctaatagaag aatcaaaagg atcagcaggc
      901 ggtagaggag ggggatccgg ttatcgtaaa atagctgaaa taattggctt taggattgag
      961 aataacaata ttgaaaaatt ttatgatact aaagaagagg acttaataga attatttgag
     1021 gtaccatata gtgcggtagc gatggatatc aaattatcag atggaaaaca aattgtagtt
     1081 cagggagtta tagatcctga tatggtaacc aactacaaca acataattac ttcttaattt
     1141 aattatttga taaatgcaaa gaaattataa taataacagt atataactat attctagaaa
     1201 attatgaata aaaataaaaa acttgttgat ggacaaatca ttggagtcgg ctccgatttc
     1261 cttgttatac acaaagatgg aaagagattt ttaattgaag tgaactttga atcattaaag
     1321 gagcttaaaa tctctactac tccttatgga tcccaaatat aatagtttta tattattttt
     1381 atatcctaaa agataaattt agtaatttta taaaaattta tatctattga aaataaatcc
     1441 caaattagaa ttaaaatatc aaaaaagaaa gaaagataat attactacca ctgctgctaa
     1501 taatcagatt aacaaaaaag ctaaaataaa atataataaa aaagctgaat ctgaattttt
     1561 tgtagataat tctgcattag cgggatttac aggggaacga atcttatata tggcagtaag
     1621 agaattaata gaaaattcac ttgatgcttg tgaatttcat catattcttc ctaatatttc
     1681 aatatcaatg aacaatattg atgctgaaaa tgatctatgg acaatctctt gtgaagataa
     1741 tggagtagga ataatttctg aaaaggttcc tgttgcggta tgctcctttt taacatctgg
     1801 caagtatgtc gaaaaacaac aaagaggact atttggcgta ggactgaaaa tgattgctgc
     1861 attctctaca aaagatacgg ataaaccaat tagagtatgg tccaaatcag ttgaagaaga
     1921 tctcgaatat tattatgaat tacgtacaga tattactaca aataaaccga tagttttaaa
     1981 taaaaaacct ctaacaaaaa cagacaaaca aattagagat aaacatggat ttaaaattat
     2041 tgctacctta cgagccagat tgtcaccgat taccaaaaat aagatttacg attatatttc
     2101 tcagactagt atcgtaaatc catatgctaa tttaattttt gaaaatgatg atgggaaaat
     2161 tacttttgaa agaagaactg aaataatgcc tcatcctgca caagaagtac ttccacatcc
     2221 tgctgaaatg gatctacaaa ctttaaaaaa ggcaatttta aatttctcta atcaaaaaat
     2281 tactattcaa agtgttttat cttgttcttt ccaaaaactt tctattgaaa aggcacgaga
     2341 aataataagt atctctcaaa tcgaaaataa atcagctaat cttttttcag aaagcgatct
     2401 tattaaaata gtgaatgcct gcaaacaaat gaaatttcaa tctcctaata ccgatcatct
     2461 aagcccaata ggagaacaga tattgactac aggaatgatg tcagaatata taattgttaa
     2521 taataaagat caaaataaaa cggtaagtca tggtggaaat ggtcataatc taaatgtaag
     2581 ggtattaaag ccagttttta catcatattc ctctcgttct acagtaatta gcaacagacc
     2641 aactatcata gaatgtggta ttgcatatgg aggaaatata aattcattta aattatatcg
     2701 atttgcaaat aaaataccat tattgtatga tgaaggctca gatgttgcaa gagaagtagt
     2761 atctgaagtt ggaattaata aaatgggtat tactaaaaaa gaagcaaaag ag
//
LOCUS       DATIAS010000696         4570 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_806736, whole genome shotgun sequence.
ACCESSION   DATIAS010000696 DATIAS010000000
VERSION     DATIAS010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4570
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806736"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(193..342)
                     /locus_tag="VLA74_14035"
     CDS             complement(193..342)
                     /locus_tag="VLA74_14035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51876.1"
                     /translation="MSISDSSIFSPIGIAFDCLGNLWVLDAGNNRVLMYKADRRKPDL
                     FSSVF"
     gene            complement(576..1199)
                     /locus_tag="VLA74_14040"
     CDS             complement(576..1199)
                     /locus_tag="VLA74_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51877.1"
                     /translation="MLSILSDIEKAVVETIRMRLSTEQALQYMKDNGFYISRATYFRH
                     KKKLEEKKLERLCHMANIGFEYQHLDRIDGLELIEKKMWEEYNKEKSPWKRVQILKYI
                     AEVQPYLSSIYEVSKFVVDDKIIKAKEKGTVELNSKTTTIINNPRVNKVPAIPFNNDD
                     DEINATTYDKNDNMNDTSFIDKMISETTEPEVIAQLEKAKRNCVFYY"
     gene            complement(1483..2652)
                     /locus_tag="VLA74_14045"
     CDS             complement(1483..2652)
                     /locus_tag="VLA74_14045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51878.1"
                     /translation="MDITKMYLLALLSAKDIERTVGSNIDYAMKGILEYIGMNPSSST
                     YDCHKYLNNIGMKLPYENVEEQIHNLIKLGRIQKVTNLDKKNKNSIEEDDESIIREKP
                     KNNTIYYSISSAGIFYLFKTNPEAIDIEFILANKEDGLFVNFLYPLLDFNTLEKIEHS
                     RTIMHITRLLARSCETIQTELKTLRNIEKNGGEAHTLGYVKGLANQEYDDGFYGPRGF
                     LQGLKNSSKIKWIDIDNTKIIEVKKEKLFKICDNKNNELMLEICPERNVAILSDKNHK
                     IKEFNLEKDPSGTYAITYFNPVMLEDYSDERFNNYGFYFYYELYKYEKEFCNSMLKYM
                     QNEYNIMNKEERMIKRQDCIAIAKDKNFQEIARHYKQEFDSRYQSFIKLSNVQQI"
     gene            complement(3026..4186)
                     /gene="priX"
                     /locus_tag="VLA74_14050"
     CDS             complement(3026..4186)
                     /gene="priX"
                     /locus_tag="VLA74_14050"
                     /inference="COORDINATES: protein motif:HMM:NF037089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase noncatalytic subunit PriX"
                     /protein_id="HSF51879.1"
                     /translation="MTVQQEIVTLASIEDGIDTNKNKKEIEIGLDFILSHLEEPTIFP
                     RTIMTKKLGYQRIVYSKERALEYFIESDCIDCRINAFPSLKEGTTWPPNLLFIDLDLA
                     DFNSSSNNNNKKALKLALNKTLKNIKEKLNDNNAHPSVLWSGNGYHIILPVYCPKELE
                     HIPEFQEFDNPSERFLRFAKDFLSNGKADKANYPSFRSCLLRIPNSLNGKCLARNESL
                     DNSKIKIIQEWNGYRTPIKELLYGFRDYMIQKKIDEYNYRQKILLNARRSNNNNNNRN
                     YYEWIENILERPFEDCRKLIVDLILAPYLINIKKLSYQESYQIIRMWLDKCDSLKRLD
                     NAGNFNYRISYALRNATNKQTRPMSFQKVKMDNNYRRLYILIKQKGRHDIRE"
     gene            complement(4189..4422)
                     /locus_tag="VLA74_14055"
     CDS             complement(4189..4422)
                     /locus_tag="VLA74_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51880.1"
                     /translation="MRYNNDTTPKNNENNNDNEQLNSQSYRSYRSYSEEESITDVKLV
                     KISSSKKSKPIEMTKEQYDSWTGNENENKEDGI"
BASE COUNT         1353 a          731 c          588 g         1898 t
ORIGIN      
        1 actagcaatt tcaattgttc taatataatg tccatttttt tgtattattt gctttttcat
       61 ttttatgatc tttattatat atattcttta atcttattag gttttttggt aatattgggg
      121 ttgttgccta attcgacata acatacggtg tcgtcatctt tatttctagt ctttttgcac
      181 attgcaatct gtttagaaca cactagaaaa taaatcgggt ttccttctat cggctttgta
      241 cattagtact ctgttattac cggcatctaa aacccaaaga tttcctagac agtcaaacgc
      301 tattccaata ggcgaaaaaa tggaactatc actaatactc atctagaatc cccttttata
      361 tcaaacaact gttttttacc aattattacc aaatctctat aagcattata aatattagac
      421 aaattaagat cctttaaatg ataatggttg tgtccaattg accattcata aaattttcgt
      481 tgagtttgga gatttccaag attggtaatt ccaatccaat atggagtaca aaatcagaaa
      541 gcactagttt atgtttatgt ttaccttctg taatcttagt aataaaagac acaatttctt
      601 tttgcttttt caagttgtgc tatcacttct ggttcagtag tttcacttat cattttatcg
      661 ataaaagaag tatcattcat attatcattc ttatcatatg ttgttgcatt tatttcatca
      721 tcatcattat taaatggaat tgctggaact ttatttactc ttggattatt gataatggta
      781 gttgttttac tgttaagctc tacagtgcct ttttcttttg ccttaattat tttatcatca
      841 actacaaatt tcgaaacttc ataaatcgag gacaaatatg gctggacttc agctatatac
      901 tttagtatct gaactctctt ccatggactt ttttctttat tgtattcttc ccacatcttt
      961 ttctctatca gttcaagacc atcaattcga tctagatgtt gatattcaaa acctatattt
     1021 gccatatgac agagtctttc aagtttcttt tcttccagtt tctttttatg tctaaagtat
     1081 gtagctcttg aaatatagaa tccattgtct ttcatatatt gtaaagcttg ctctgtagat
     1141 aagcgcattc taattgtttc tacaactgct ttttcaatat cacttaggat gcttaacatg
     1201 agactaaaaa tatcacctgc ttatctgcta cgcaaaacat ttgcttttta aacctaccac
     1261 aatatggaat gagctcgtgt tgatatacct attatcataa tatctatatg gattcatgat
     1321 ataattttaa taaggaaagg ttagctttat gcatttcctt ttctattcgt gtctttacaa
     1381 tgatatagta tattaaatta ttactataat atccacttta tttactcaat taaaaattat
     1441 ttgttatatt gtagatgaaa ctgattatgt aaagatgaat atctaaatct gttgtacatt
     1501 gcttaacttt ataaaactct ggtaacgaga atcaaactct tgcttgtaat gcctcgcaat
     1561 ttcttgaaag tttttatctt ttgcaatagc tatgcagtcc tgtcttttta tcattctttc
     1621 ttccttattc attatattat attcgttttg catatatttc aacatagagt tacaaaattc
     1681 cttctcatac ttatatagct catagtaaaa gtaaaagcca taattattga atctttcatc
     1741 actataatct tctagcatga caggattgaa atatgttatg gcataagtcc cactgggatc
     1801 tttttcaaga ttaaactcct ttatcttatg gtttttgtct gataatattg ctacatttct
     1861 ttctggacat atctccaaca tcaattcatt atttttatta tcacaaattt taaagagttt
     1921 ctcttttttg acctctatta ttttagtgtt atctatatct atccacttta tcttagaact
     1981 attttttaga ccttgtaaaa atcctctagg accataaaat ccatcatcat attcttgatt
     2041 tgctaaacct tttacataac ccagtgtatg agcttctcct ccatttttct ctatatttct
     2101 taatgttttt agctctgtct ggattgtctc acaagatcta gccaaaagtc tagtaatgtg
     2161 cattattgtt ctcgaatgct ctattttttc aagagtgtta aagtccaaaa gggggtagag
     2221 aaagtttaca aaaagtccat cttctttgtt tgccaatata aattctatat ctatggcctc
     2281 tggatttgtt ttgaataagt aaaatattcc tgcagatgat attgaataat atatagtatt
     2341 attttttggt ttttctctaa taatagattc atcatcttct tctattgaat tcttattctt
     2401 cttgtcaaga tttgtaacct tttgaattcg tcctaatttg attaaattgt gtatttgctc
     2461 ctctacattt tcatatggta atttcattcc aatgttgttc agatatttgt gacaatcata
     2521 tgtagaagat gaaggattca ttccaatata ttcaagtata cccttcattg catagtctat
     2581 attggaacca actgtccttt ctatatcttt agcagaaaga agagctaata gatacatttt
     2641 tgttatatcc atgtataaca tatatattat agtatattta tatgttacca ttttggagat
     2701 acatttaaat atataaaacc tatgatatga gttaacctaa aaatgtaatt gtaagaaaaa
     2761 agtattattt ccagcttatc tttaagaatc tagtaattgt tttcctgcaa tacaatatgc
     2821 aaaagctaaa gaaggttgaa gagctacaat cttttaagaa tcactgcctt tttgaaatga
     2881 tctttgttat aattttcaaa aaattagatt gaattttttc aataatttag aatctaaaaa
     2941 atattatttg atgacttgta gacatgttgt atctaatcta aactgtccaa agtattattt
     3001 aaaaaaattg ttatgttgtt ataatttatt ctcttatatc atgtcttccc ttttgcttta
     3061 tcaatatgta caatcttcta tagttattgt ccatctttac cttttggaaa ctcattggtc
     3121 tagtctgttt attcgttgca tttctgagag cataagatat cctataattg aagtttccag
     3181 cattatccag tctcttaaga gaatcacatt tgtcaagcca cattcttatt atttggtacg
     3241 attcttgata tgataatttt tttatgttta ttagatacgg tgccaatatg agatctacta
     3301 ttagttttct acaatcttca aatggtcttt caagtatgtt ttctatccat tcataataat
     3361 tcctgttatt attgttatta ttactccttc ttgcattaag taatattttt tgtctgtaat
     3421 tatattcatc aatctttttt tgtatcatat aatctctaaa accatataat aattctttta
     3481 taggtgttct ataaccattc cattcttgaa ttatcttgat ctttgaatta tctaggcttt
     3541 cgtttctggc aagacatttt ccatttaatg aatttggaat acgtaaaaga caagacctaa
     3601 atgagggata gtttgctttg tctgctttgc catttgacaa aaaatctttt gcaaatctca
     3661 aaaatcgttc agaaggatta tcaaattctt gaaactctgg tatatgttct aactctttag
     3721 gacaatacac tggtaaaatt atatgatatc catttccact ccacagaact gatggatgtg
     3781 cattattgtc atttagtttc tctttaatat ttttcagagt tttattcaat gctaatttca
     3841 atgctttttt gttattgtta ttagaagaag aattgaaatc tgcaagatct aaatcaatga
     3901 ataataggtt aggtggccat gtagtacctt cttttaatga aggaaatgca ttgattctgc
     3961 aatctataca atcagattct atgaaatatt ctaatgctct ttcttttgaa taaactattc
     4021 tctgatatcc taatttttta gtcattatag ttcttggaaa tattgttggc tcttctaaat
     4081 gagataaaat aaagtctagg cctatttcta tttccttctt atttttattt gtatcaatgc
     4141 cgtcctcgat tgaggccaac gttactattt cttgctgtac tgtcattatt atatcccatc
     4201 ttccttgttc tcattttcgt ttccagtcca tgagtcgtat tgttcttttg tcatctctat
     4261 aggcttactc tttttactac tagatatctt cactaacttg acatctgtaa tagactcttc
     4321 ttcgctatat gacctatatg acctatatga ctgagaattt agttgttcgt tatcattatt
     4381 attttcatta ttttttggtg tagtatcatt attatatctc atccatctcc ttcttcttct
     4441 ctatagagtg aatacgtgaa ggctgtgaag gctctagggt aaaggggtaa gtattttaaa
     4501 aaatttttta tttctgaatc atgtcccaac aggatattat tatgatgatg atgatgaggt
     4561 aattttgatt
//
LOCUS       DATIAS010000697         3401 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1623527, whole genome shotgun sequence.
ACCESSION   DATIAS010000697 DATIAS010000000
VERSION     DATIAS010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3401
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1623527"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VLA74_14060"
     CDS             <1..208
                     /locus_tag="VLA74_14060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51881.1"
                     /translation="KSIHDIRKEDLVAMDQLSSIASDLPLEDGQTYKDIIKGRIATVL
                     KENHLIGIKKTTTMHDHLGINNIE"
     gene            201..1454
                     /locus_tag="VLA74_14065"
     CDS             201..1454
                     /locus_tag="VLA74_14065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51882.1"
                     /translation="MNNSEKFLIRKSILELARTGMPRSNSIDDDIRHNNQNKISYDTV
                     NLWDYVTALGAQLSRPAYDPYRETINLDTTIGRSPSYKVNLTMPLLIYENMLFSNDVL
                     EAIHRTLNILAEEGNLLGFVSEEEIKNTTANKRKYPWFKKISSNTTANQLKSYQIDSP
                     QGIVLEYGDHSSIKLLKNLRKEFKYPILVDISNIFPNYINEILDTGIDGIIVDTEKVK
                     KQNEIYKTKHAIAVIHDTRNALNEYTKIVNKKNRSNLHQDCNNNNNNKNKKSCHGSAE
                     VTLVIAGDVNTTGKIIKSVALGADIIGYSTSMLIAYSEIFSDRLFDIDFVTERVYRHM
                     IATKEEIKGIPAALGYSNFHNLTPSDLRTSSIEASLQGDILLEGVDKTYYQIIDGILD
                     EYIEENKIHLSLEERKEVIKSLVRH"
     gene            1459..2316
                     /locus_tag="VLA74_14070"
     CDS             1459..2316
                     /locus_tag="VLA74_14070"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HSF51883.1"
                     /translation="MCGICGIMLENCGCYNDFPIGSILYKMMESQQIRAQDSTGIAIF
                     NKKFDHEFYDIEYFKKENDKYNRFCEKVYPERLNTVLYDLNQDPNVIISTCAKQMSLI
                     KDVGLVRDLDTKYNIQSIQGTHGIGHLRIATSSRVTPDNAHPFSTTIMPDIAVVHNGE
                     IANYSKLKSSLELQGYHFYSRCDSEVIAVFIADQLLKHNDIERANYEFINKADGPFTY
                     IVSTPNCLALVRDRFGARKGIFGYNPGTRNYPSFWAIATDLSALDCVGANLYVETSQP
                     GKPKIFYKK"
     gene            2334..3257
                     /locus_tag="VLA74_14075"
     CDS             2334..3257
                     /locus_tag="VLA74_14075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51884.1"
                     /translation="MYNLDIDEIRELANSIGSSTSNLDEQFERLNSALYKKFGIVLPK
                     GLKRASHEKFMDIVSSPLIYERTVNSILKRKIKEGETNIKLKNPRALYRIGILGFREP
                     IKLNLMVEGNVGNFFASGCNFIGTWTVNGHAENGLADKGYSGKIIVDGFATELAAQNN
                     QATDFSLGVDILVRKGCMERAMGQARGGSLITFGAGYNSGLYMSGGILLNLGHIGQSF
                     GPGMVGGVIYSMTGTTPGEGATIQEINNLDYTIIFQVLKKFEKELNIEGLNNFSSKNP
                     ILWITNDGKMEKYDFREYIKIVSILDSSNKE"
BASE COUNT         1350 a          435 c          584 g         1032 t
ORIGIN      
        1 aaaaagtata catgatatta gaaaagaaga tctagtggca atggatcaat tgtccagtat
       61 agcttcagat ttgccattag aagatggtca aacctataaa gatataatta aaggaagaat
      121 agcgacagtg ttgaaagaaa atcatctgat tggtataaaa aaaacaacaa ctatgcatga
      181 ccatttagga atcaataaca ttgaataatt cagaaaagtt tttaattaga aaatctatct
      241 tggagcttgc aagaacaggg atgccaagat caaattcaat agatgatgat attaggcaca
      301 ataatcaaaa taaaattagt tatgatacag taaacctttg ggattatgta actgcattag
      361 gagcacaact atctagacct gcatacgacc cttatagaga aacaataaat ctagatacga
      421 ccataggaag aagcccatct tataaagtta atttaacaat gcctttgtta atttatgaaa
      481 atatgttatt ttcaaatgat gttttagaag ctattcatag aactttaaat atacttgctg
      541 aagaaggaaa tctcttagga tttgtttcag aagaggaaat aaaaaataca acagctaaca
      601 aaagaaaata tccatggttt aaaaaaattt catccaatac aacagctaat caactaaaat
      661 cttaccaaat tgattctcca caaggaattg tattggaata tggagatcat agttcgatca
      721 aattactcaa aaatttaaga aaagaattta aatatcctat actagttgat attagtaata
      781 tctttccaaa ttatattaac gaaatattgg atacaggtat agatggaata atagtagata
      841 cagagaaggt aaaaaaacaa aatgaaatat acaaaactaa acatgctatt gcagttatcc
      901 acgatacaag aaatgcttta aatgaatata ctaaaatagt caataaaaaa aatagatcta
      961 atttacatca agattgcaat aataataata ataataaaaa taaaaagagt tgtcatggaa
     1021 gtgctgaagt gactttagta atagcaggtg atgtaaacac cactggaaag attataaaat
     1081 cagttgcttt aggtgcagat ataataggat actctacaag tatgttaata gcatattctg
     1141 aaattttttc tgatagactt tttgatattg actttgttac agaaagagtt tatcgtcata
     1201 tgatagctac caaagaagag ataaagggaa ttcctgctgc tctaggatat agtaattttc
     1261 ataatctaac accttctgat ttacgtacat ctagcataga ggcaagctta caaggtgata
     1321 ttttacttga gggagtagat aaaacatatt atcaaatcat cgatggaata cttgatgaat
     1381 atattgagga aaataaaatt catctaagtt tagaagaaag aaaagaggtt atcaaatctt
     1441 tagtgaggca ttaaaaaaat gtgtggaata tgtggaataa tgttagagaa ttgtggttgt
     1501 tataatgact ttcctatagg ctcaatttta tataaaatga tggagagcca gcaaataaga
     1561 gctcaagata gtacaggaat agcaattttt aacaaaaagt ttgaccatga attttatgat
     1621 atcgaatatt ttaaaaaaga gaatgacaag tacaatagat tttgcgaaaa agtatatcca
     1681 gagagattaa ataccgttct atacgattta aaccaagatc ctaatgtgat tatttctact
     1741 tgtgcgaaac aaatgtctct tataaaagat gtaggtctag tacgagatct tgatacaaaa
     1801 tataacatcc agtcaataca agggacacat ggtattggac atttaagaat agccacaagc
     1861 agtagggtta cccctgataa tgcacatcca tttagtacta caattatgcc agatatagca
     1921 gtggtacata atggtgagat agcaaattat tcaaagttaa aatcttctct agaattgcaa
     1981 ggatatcatt tttactctag atgtgattcc gaagtaatag ctgtatttat tgctgaccag
     2041 cttttgaagc ataatgatat agaaagagca aattatgaat ttattaacaa agcagatggt
     2101 ccatttactt acatagtctc aactcctaat tgtttagcac tagtaagaga taggtttgga
     2161 gcaagaaaag gtatttttgg atacaatcca ggtacaagaa attatccttc tttctgggca
     2221 attgctactg atctgtcagc attggattgt gtaggcgcaa atttatatgt agaaacatca
     2281 cagccaggaa aaccaaagat tttctacaaa aaataatata atattcaaga aaaatgtata
     2341 atttagatat tgatgaaatt cgagaacttg cgaatagtat aggttcaagt acatccaatc
     2401 ttgatgagca gtttgaacgg cttaattctg cattatacaa aaaatttggt atagttctac
     2461 caaaaggatt gaaacgtgca tctcatgaaa agtttatgga tattgttagt tctccattga
     2521 tatatgaaag aaccgtaaat tcgattttaa agagaaagat aaaagaagga gaaaccaata
     2581 taaaattaaa aaatcctaga gccttatatc gtataggtat cttaggtttt cgagaaccaa
     2641 taaaactgaa tttaatggta gaaggcaatg taggaaattt ttttgcatca ggctgtaact
     2701 ttataggcac atggactgtc aacggacatg ctgaaaatgg attagctgat aaaggctata
     2761 gtggaaaaat catagtcgat ggttttgcaa cagaacttgc agcccagaat aatcaagcaa
     2821 cagactttag tttaggtgta gatatcctcg ttagaaaagg ctgtatggaa agagcaatgg
     2881 gtcaggctag aggaggtagt ctaataactt ttggcgctgg atataattca ggtctttata
     2941 tgtctggagg aatactattg aatctaggcc atataggaca atcatttgga cctggaatgg
     3001 taggtggagt aatttattca atgactggta ccactcctgg tgaaggagca acaattcaag
     3061 aaataaataa cttagattat actatcatat tccaagtatt gaaaaaattt gaaaaggaac
     3121 taaatattga aggattaaat aatttttctt ctaaaaatcc tattctgtgg ataacaaatg
     3181 atggcaaaat ggaaaaatat gactttagag aatatatcaa aattgtttct atacttgatt
     3241 ctagtaataa agaatagtag cttattttta aatcatcaat gagtatatca aaaatttcaa
     3301 tatctataaa taacaaaata attactatta tccatttttg ttagaaacaa ttgtgtcaaa
     3361 aattaaaaat ttatttaata ttactaactt ttcaaaaatt a
//
LOCUS       DATIAS010000698         2414 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_672330, whole genome shotgun sequence.
ACCESSION   DATIAS010000698 DATIAS010000000
VERSION     DATIAS010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672330"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(339..1661)
                     /locus_tag="VLA74_14080"
     CDS             complement(339..1661)
                     /locus_tag="VLA74_14080"
                     /inference="COORDINATES: protein motif:HMM:NF014443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HSF51885.1"
                     /translation="MLSLFGSLPYMYVNPFWPGIDLFSLFANSFLESSSGFTTTGLST
                     IIHPEDLSDSFSFYRSYTLWVGGLSFVYLVMALYYPETKLAGIMHLLGGGILRFKQLL
                     STISVIFAIYTAIIALLIFFFGHVNVLNSISLGFATLSSGGFVPTSTILNVENPFTLI
                     VIMGGMIIAALPFAFHFGIFSKNVEATKELKEVLLFIILLIFFIFLFIFIESSYSEKE
                     WITSMFHVISASTTTGFQFIDLSHLSIYGKILLIVVMLVGGTAFSTAGGIKIARLLLI
                     FEKLINNKKYASTFNEKNAPSLPPIISATAIQFRKRIQQSFKSYNQGKEVEKINKQMT
                     CEVPLDKYKFNILSDKAFREALFVVVLFILFTVITALCIYYLDRNNHSFINTVFETAS
                     TISNTGLSAGITTMDLDSVSKMILSFNMIMGRFEIIAILYIFISKLRR"
     gene            complement(1642..2337)
                     /locus_tag="VLA74_14085"
     CDS             complement(1642..2337)
                     /locus_tag="VLA74_14085"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSF51886.1"
                     /translation="MVEPLERPLSSYIHTQFVTADENTSIAEAVKILQPKNVEIILVT
                     SNGKYVGIVTDSDILEKVVMKGEDSDLVFLKSIMTSPIISLPSSATVKEAIELMRTHK
                     IKHLPVTDITNKEEQIIGTVTQEYLAEAIRIAVVEKTFRGYRKIIREHYKPIFANVAI
                     ILQFSGLLMIIPALLGTILGEWQSSIGIYIAFVGMFLTGYIMNILGEKSPLNLKQSSI
                     VVVLSFCIVKSIW"
BASE COUNT          893 a          354 c          325 g          842 t
ORIGIN      
        1 tatagtattt tcagttaatt atcaattgtt atctaccaat acctattatt tttgtttatt
       61 tcgaaatatt cggacaatat caacaactat atcaataaga atttttttca atttttttta
      121 tatttaacag ttaagttgac atttcactaa acctaataat tcgaaagaat gctcaaataa
      181 atcataacag ttaaggtact aatgaacaag tttctattga ataataataa aaaagattat
      241 tttagtttat ttttctgcat tagttaatga gtaggataag gttattgaag atacaaaaag
      301 aaatgaaata aaaatataga ctattggttc catgtttttc atcttctcaa ctttgaaatg
      361 aaaatgtata gtatggcaat aatctcaaat cttcccatta tcatgttaaa agataatatc
      421 attttggata cagaatctaa atccatcgtt gttattcctg ctgataatcc agtattagaa
      481 atagtagaag ctgtttcaaa tactgtattg atgaaactat gattatttct gtctaagtaa
      541 tatatgcata atgctgttat gactgtaaat aaaataaaaa gaacaacaac aaataatgct
      601 tctctaaaag ccttatcaga aaggatatta aatttgtact tgtctaaagg gacttcacat
      661 gtcatttgtt tattgatttt ttctacttct tttccttgat tatatgactt gaaagattgt
      721 tgaattcttt tacggaattg aattgcggtt gctgaaataa taggaggcag actaggagca
      781 tttttttcat taaatgttga tgcatatttt ttattgttaa ttaatttttc aaaaattagt
      841 aatagtctag ctatttttat tcctccagca gtagagaatg cagttcctcc tactagcata
      901 actacaatta gtaatatttt accatagata gacagatgtg ataaatcaat aaattgaaag
      961 cctgtagttg tggatgcact aattacatga aacatagaag taatccattc tttttctgaa
     1021 taggaagatt ctataaatat aaataaaaat ataaaaaaaa ttagaagtat tataaataat
     1081 agaacttcct taagttcctt tgttgcctct acatttttac tgaaaatacc aaaatgaaat
     1141 gcaaaaggta atgctgcaat tatcattcca cccataatta caatcaaggt aaatggattt
     1201 tctacattaa gaatagtaga tgtaggtaca aatcctccac tagacagcgt agcaaagccc
     1261 aatgatattg aattgagtac atttacatgt ccaaaaaaga atattaataa agcaataatt
     1321 gctgtatata ttgcaaagat gacactaatt gtagataata attgtttgaa tcttaatatt
     1381 ccaccaccca ataagtgcat tatacctgct aattttgttt ctggataata caaagccata
     1441 actaaatata caaaacttaa tccaccgacc cacaaagtat aagagcgata aaatgaaaaa
     1501 ctatcagata aatcttcagg atgtattatt gtagaaagac ctgtcgttgt aaaaccagat
     1561 gaactttcca agaaagaatt agcaaaaaga gaaaataaat caattccagg ccaaaatgga
     1621 ttgacataca tataaggcag actaccaaat agacttaaca atacaaaagc ttaacactac
     1681 aacaatagat gattgtttta gattgagagg acttttctct cccaatatat tcataatata
     1741 gcctgttaga aacattccta caaatgcaat gtaaatacca attgaagact gccattcacc
     1801 tagaattgtt cctaataatg caggtataat catcagcaaa ccagaaaatt gcaatataat
     1861 agccacattt gcaaaaattg gtttataatg ctctcttatt attttcctat aacccctaaa
     1921 agttttttca acaactgcta tacgaattgc ttcggcaaga tattcttgtg ttactgtacc
     1981 aataatttgt tcttctttat ttgtgatatc agtaacagga aggtgtttga ttttgtgagt
     2041 acgcattaat tctatagctt cttttactgt agcagaactt ggcaatgata ttattggaga
     2101 tgtcataatt gatttgagaa atactaaatc tgaatcttct cctttcataa caaccttttc
     2161 taaaatatca ctatctgtta caattccaac atattttcca tttgatgtaa caaggattat
     2221 ctcaacgttt ttgggttgta atattttaac tgcttcagca atagaagtgt tttcatcagc
     2281 agtaacaaat tgagtatgaa tatacgatga cagaggacgt tctaatggtt caaccattaa
     2341 caatcatcat tttatagctt attcttatga cttttacttt caattattaa agtttgttaa
     2401 ttaaaatata tcaa
//
LOCUS       DATIAS010000699         2703 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_807887, whole genome shotgun sequence.
ACCESSION   DATIAS010000699 DATIAS010000000
VERSION     DATIAS010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_807887"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VLA74_14090"
     CDS             <1..223
                     /locus_tag="VLA74_14090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HSF51887.1"
                     /translation="RMVYDQMAEPKYVIAMGACSITGGLYIDSYNVLPGIDGVIPVDV
                     YVPGCPPRPETLIQGCMLLQEKIKRSKIR"
     gene            1099..1620
                     /locus_tag="VLA74_14095"
     CDS             1099..1620
                     /locus_tag="VLA74_14095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51888.1"
                     /translation="MSSKKEELEKNADQQKKQAEEVSSTVKETANKINTELIEYQEGT
                     KKIFQENVDSVNQFQERFIRTSKEISNSYIELQKNILNIYQSGYSQVLNNLYKTYWNN
                     FMIPERYGESYNKFNKNISDSITNSTKIINDIVIGNVEIINRSIEVTQKFYNDSIQNY
                     FNYVRKIEKSYNN"
     gene            complement(1877..>2703)
                     /locus_tag="VLA74_14100"
     CDS             complement(1877..>2703)
                     /locus_tag="VLA74_14100"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51889.1"
                     /translation="DFNFALVGDWGCTKDTKKTVDSIQDHNPEIVFNLGDTSYQLDSD
                     CWLDIVKPISDKMTVSIGNHDTMTPYMLNQLMNHFELSKQYYSFDYKSIHFLIMSSEF
                     LYLPGSGQYSFIENDLSKASKNPDTNWIIVMTHRQQYSSHCGEHDSCDPIKKLRDTYH
                     PLFEKYGVDLLFSGHAHNYQRTYPLSYNKINSSQPIINDNGKTEYTSPKGMFQIVVGT
                     GGIDFDRFTNQEPYVAYQQDSSYGFLNVDVADNGNVLIGRYYSNNGTILDKFKVVK"
BASE COUNT         1006 a          378 c          426 g          893 t
ORIGIN      
        1 aaggatggtt tatgaccaga tggcagaacc caaatatgtc attgcaatgg gagcatgttc
       61 tataacgggt ggcctgtata tcgattccta caacgttctt ccaggtattg atggcgttat
      121 acctgttgat gtctatgtac ccggttgtcc tccaagacct gaaacactga ttcaaggttg
      181 catgttattg caggaaaaaa tcaaaaggtc gaagataaga taaaagtcaa tggttaacga
      241 acaattaaca aagtcgttta aatgccgata tgattatgga aatttagcaa gaatttgata
      301 attgtatatt gttatttttt aggttaaata cctaaaattc tctttaatga aatctagctc
      361 gttggttgat taactcgatt atttttttat ctatagtcat atttacatac cattatgacg
      421 tattagtaat tatggatatg tcagtagtct gtggaaattg tggaagaaag acacaagatt
      481 atccagtttt ctgttacatg tgcgatgatt attattgctc cgacaactgt cataccgaaa
      541 aacatgctgt acagtataaa aaatattgag acaataacaa aatagaaaaa aaaaatactt
      601 gtttgttcaa aaatacttat cgagatggca agtaatttca gagtatagcc agatagatca
      661 catatcaatt gcctctttaa tcaagacatt tcactataga ggcatatgga aatcatgcaa
      721 gtgcaaattg gtatataaac ttaaatgaaa acatcaataa aatgagatta tgcaaatctg
      781 aaatactttg ctataaagat tttttgaatt tgtggaatgt gtaggtaaaa ggatgcaatt
      841 tggaaaagca aagaaatagg aaaattcaaa aaaacataga tagagggtgc ttaaatcgtg
      901 attggatgat aagggaatat ttttgatggt aaaatttaaa aggtaccgat ttatgcatga
      961 tataaaaaaa taaataaata tttcttaggt ttgtgatgaa atttgaattt tattttacaa
     1021 attggatatt ttttatattt ctattgtact ggaatttaca caaagtattt atgtgatgct
     1081 tcgtttgatt taaatcccat gtcaagtaaa aaagaagaat tagaaaaaaa tgcagaccag
     1141 caaaaaaaac aagcagaaga agtttcatca accgttaaag aaactgccaa taagatcaac
     1201 acagaattaa tagaatatca agaaggaact aaaaagatat ttcaagaaaa tgttgacagt
     1261 gtaaatcaat ttcaagaacg atttattaga acatctaaag aaatttcaaa tagctacatt
     1321 gaattacaaa aaaacatact taatatctat caatctggat attctcaggt attaaataat
     1381 ttatacaaaa cctactggaa caattttatg attccagaaa gatatggcga gtcatataac
     1441 aaatttaaca aaaacatatc tgatagcatt acaaactcta ctaaaataat caatgatatt
     1501 gtaataggaa atgttgaaat tattaacaga tccatagaag taactcaaaa gttttacaat
     1561 gattcaatac agaattattt caactatgta agaaaaattg aaaaatctta caacaactaa
     1621 atttttttaa ttaaattcta agattaaata ctacttttca atcgttagtt tttaaacaaa
     1681 aatttaaaga ttcccacaaa ctattatata ggttatattc tgcctttctc tatagacaat
     1741 tctgtataag aattattaaa aattaaattt tttaattttc tcctttttaa accatagata
     1801 gatatcatgc tacgaaaatt ctgactaata ggaatgcata tgtggtaaaa aagattttta
     1861 acaggagtat atttttttat ttaacaactt tgaatttatc taatatagtc ccattattgg
     1921 aataatatct acctattaac acatttccat tatcggctac atccacgttt aagaatccat
     1981 agctagaatc ttgctggtat gcaacataag gctcttgatt ggtgaaacga tcaaaatcga
     2041 tccctcccgt ccctacaact atctgaaaca ttcccttagg ggatgtgtat tcagttttgc
     2101 cattatcgtt gataattggt tgtgatgaat ttattttatt atatgatagg ggataggttc
     2161 tttgataatt atgggcatgg ccgctaaaca gtaaatcaac tccatatttt tcaaataggg
     2221 gatggtaggt atctctcaat ttttttatcg gatcacaaga gtcatgctct ccgcagtgtg
     2281 aagaatattg ttgtctatga gtcataacaa taatccaatt tgtatccgga tttttggagg
     2341 ccttagataa gtcattttca ataaaactgt actgtccaga accaggaaga tataaaaatt
     2401 cagatgacat gatcagaaaa tgaatactct tgtaatcaaa tgaataatat tgtttggata
     2461 attcgaaatg attcattaat tggttcaaca tatatggcgt cattgtatca tgatttccaa
     2521 ttgaaaccgt cattttgtca gatattggtt taactatgtc taaccaacag tcactgtcaa
     2581 gttggtaaga tgtatcccca agattgaaca ctatctctgg attgtgatct tgaatagaat
     2641 ctactgtttt cttagtatct ttagtgcaac cccaatcacc aaccaatgcg aaattaaagt
     2701 cag
//
LOCUS       DATIAS010000700         2625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_264367, whole genome shotgun sequence.
ACCESSION   DATIAS010000700 DATIAS010000000
VERSION     DATIAS010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264367"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..1289)
                     /locus_tag="VLA74_14105"
     CDS             complement(12..1289)
                     /locus_tag="VLA74_14105"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF51890.1"
                     /translation="MVIILNQYFLLVSLFFLLFLIAFTTIFQVIPVVSANEDADDGFF
                     GIFPEDYYDSSYYGEEISSFSEQLDEETTTTIIDNDHTNNTLLLSPTTIDNNGKSFSS
                     TATNSSSENYSNDINFIATGDWSCNKQTQKTINKITKLEPELVLGLGDYTYKNISPQC
                     WFDISEPIDNIIKIAIGNHDLDYKSSYRQLLDHYNLIQPYYSFNFHNIHFLAISSEHP
                     FEKGSKQYEFIKNDLEESLQNPSILWRIVFLHKPMYTSADFSKKDAEDLKNTFHELFE
                     SYKIDLVLSGHTQYYQRSLPLTYNNDDPFYPVVMDQNNYEYTNQDGGIIFVSAGTAGD
                     ELHKVAYSYPYYVIQEQKFGFLNFDLENNGYTLIGTFYETDDLGILDRFVISKDVSGE
                     KIYFDDDNNNEGEEIKSDPFDDDNNKYYFVSMK"
     gene            complement(1537..2202)
                     /locus_tag="VLA74_14110"
     CDS             complement(1537..2202)
                     /locus_tag="VLA74_14110"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSF51891.1"
                     /translation="MNIRFERNRTSTIVVMYSLYLYFLGLSLRNTSKALTIFKDDKRS
                     HVSVWNWIQRFGSLHIYKRKRVSAFIIDETVIQIGNQHFWLWFCIEPIHSSVLGIHIS
                     DERNMLVAEKFIRSLVEKYGRHTVYTDGGTWYDEACNVIGLKHYLHSSIEKSLMERVN
                     QYFKDRIESFDDYYPCRQMECNLFHVYNWIQFFVSMYNDTIANNNNNNNCFELGAVNI
                     ILN"
BASE COUNT          930 a          379 c          337 g          979 t
ORIGIN      
        1 atttctaatt tttatttcat tgaaacaaaa taatatttat tattatcatc atcaaatgga
       61 tcagacttta tttcttctcc ttcattatta ttatcatcat caaaataaat tttttctcca
      121 ctgacatctt ttgaaattac aaatctatcc aaaataccaa ggtcatctgt ttcataaaat
      181 gttcctatta gcgtatatcc attattttcg agatcaaaat ttagaaatcc aaatttctgt
      241 tcttgtatta cgtaataagg atatgaataa gctactttat gtaattcgtc tcctgcagta
      301 cctgctgaca caaagatgat accaccatct tgattagtat attcatagtt attctgatcc
      361 attacaacag gatagaaagg atcatcattg ttatatgtaa gtggaagaga tctttgataa
      421 tattgagtat gtcctgataa aactagatct attttataag attcaaacaa ttcatgaaat
      481 gtatttttta aatcttcagc atctttttta ctaaaatcag ctgaagtata cataggcttg
      541 tgtaagaata caattctcca caaaatagaa ggattttgta aagattcttc taaatcattc
      601 tttatgaatt catactgctt gcttcctttc tcaaatgggt gttcagaaga gatggctaga
      661 aaatggatgt tgtgaaagtt aaaagaatag tatggttgta ttaaattata atgatcaagt
      721 aattgtcgat aggaactttt ataatccaaa tcatgatttc ctattgcaat tttaattata
      781 ttatctatag gttctgaaat atcaaaccaa cattgaggtg agatattttt gtaggtataa
      841 tcaccaagac ctaagactag ctctggttct agctttgtaa tcttatttat tgtcttttga
      901 gtttgtttat tacaactcca gtctccagta gcaataaaat tgatgtcatt tgaatagttt
      961 tccgatgaag aatttgttgc tgttgatgaa aatgattttc cattattatc aattgttgta
     1021 ggagatagca gaagagtatt attagtatga tcattatcta taatagtagt agtggtttct
     1081 tcatctaatt gttcagaaaa agaagatatt tcttctccat aataactgga atcatagtaa
     1141 tcttctggaa atataccaaa aaaaccatca tcagcatcct cattagctga tacaacaggt
     1201 ataacctgaa atattgtagt aaaggcgatt aaaaataaca agaaaaataa actaactaaa
     1261 agaaaatatt gattcaaaat aattaccatt ttattttaat caaataaatt atcattatag
     1321 attatataaa atttgaagaa gacattttta gaaaaagatt ctattgttgc tttattaata
     1381 ttaatttatt acaagatttt tacatgcaaa aataatgaga aaaccaaagt tttcattagt
     1441 taaaataagt aaaatgatca ctttggtttg gttatttatt cttaggtaga gatatataca
     1501 tttaccaatt tgtctttatt tattattaaa gggctcttaa tttaagataa tattcaccgc
     1561 tcctaactca aaacaattat tattattatt attatttgct attgtatcat tatacatgga
     1621 tacaaagaat tgtatccaat tataaacatg aaataaatta cattccattt gtctacatgg
     1681 ataataatca tcaaaactct cgattctatc tttaaaatac tggttgactc tttccatcaa
     1741 acttttctct attgaagaat gcaaataatg ttttaatcca attacattac atgcttcatc
     1801 ataccatgta ccaccatcag tataaactgt atgtctgcca tatttttcaa ctagtgaacg
     1861 aataaatttt tcagcaacaa gcatgtttct ctcatcagag atatgaattc caagcactga
     1921 agagtgaatt ggttcaatgc agaaccatag ccaaaaatgt tgattcccaa tctgtataac
     1981 agtttcatct ataataaaag ccgatactct tttccttttg tatatgtgca atgaaccaaa
     2041 cctttgtatc caattccaaa cagaaacatg acttctttta tcgtccttga aaattgttaa
     2101 tgctttagat gtattacgta gactgagacc aagaaagtat agataaagag aatacattac
     2161 tacaattgtg gatgttctat ttcgttcaaa tctaatattc atactatata gattagaatt
     2221 agaatgttca cagctaaatc tagatcgtta acttaacaca gccccaattt ttataaaata
     2281 tattgttttt tactttaata tgtcatttat tgcatacctt aaactgtttt gaataataat
     2341 tactattact atctacttac atttttttaa tttattatta tgatttatct tacatttagt
     2401 tttttaaata tgcaaattct tttcaattta attaaatgag gctgggtcat aattattcca
     2461 ttttcataac gaataaagct agtttattgg tgtatgatgt tttggtgaaa gaccatacta
     2521 accaacaaac tagcacagaa gaaaagatcc acatccattc taattagtat tttgtatttg
     2581 attggtttga ttcgttggcc acataataaa acaagaggac gtggt
//
LOCUS       DATIAS010000701         4584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_536512, whole genome shotgun sequence.
ACCESSION   DATIAS010000701 DATIAS010000000
VERSION     DATIAS010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4584
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536512"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..365)
                     /locus_tag="VLA74_14115"
     CDS             complement(126..365)
                     /locus_tag="VLA74_14115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51892.1"
                     /translation="MDNKIKEIRIIKKEDSKEEYTFVSENILNNMKNKSVNNEKESIK
                     KSDERIEKKIHSGKSRHKGRKVLGKSIQGHSPVYE"
     gene            complement(402..1331)
                     /locus_tag="VLA74_14120"
     CDS             complement(402..1331)
                     /locus_tag="VLA74_14120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HSF51893.1"
                     /translation="MKSLNIAVLGDHEILKDLGKLGTTSDISLYDKKMVDKVFTWVSP
                     ITFPEKIQSLVQVINMTELVVLNVKSLDKYFAEQIIALDSLQISEGFILHSYDVDHDR
                     LQQMIKDTTVANFRILDDVNSLKIELNNISPISNEGNLIIPIDHSFDVKGVGTVILGV
                     IKQGSVKIYDKLKILPSNKEILVKSIQMHDDPVNEASSPARVGLSLKGVSPDEIERGD
                     IISDGEGLEVSSSELIVPNLSRNRYYKNEISQNQTYLISVGLQIKPVKIVFQDSKIKL
                     LLEKQIVYYHNQKFLILKPDSKSTRIIAQGLLP"
     gene            1404..1682
                     /locus_tag="VLA74_14125"
     CDS             1404..1682
                     /locus_tag="VLA74_14125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51894.1"
                     /translation="MVDRKSFHVLFLPLLASGIVISTVGTILKFLGEMVGSNGEGFSI
                     IGVRLIIGGACTIIISFYAQYYHEISKSLLILKFVFMNFIKRHELSRR"
     gene            1782..2072
                     /locus_tag="VLA74_14130"
     CDS             1782..2072
                     /locus_tag="VLA74_14130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51895.1"
                     /translation="MSQLSDEKKVHVIVHGNRQIYEQVKNMLIENNIKSENITMASLD
                     KAGEIGEYVAMVWPPMNAKEIIISEIVGDQAEGKGMGAWASIDQRELFRLSL"
     gene            2310..3101
                     /locus_tag="VLA74_14135"
     CDS             2310..3101
                     /locus_tag="VLA74_14135"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSF51896.1"
                     /translation="MTPTLAEFYLDAVVDVNELIKKAQTRTWSALQAKEFNISPDDSR
                     YILEKYLESKIKLVIIHVDIVGFTKLCTTLSANRLADIIRAFTQEMSILICSYGGYVL
                     KFVGDAVLGFFMVKTGGRDEEKIPCVNALNCALAMIKVIKHGINPILSQYDYSEIHVR
                     IAVDVGENAVVQYGWEKTIINTQNEKFEVKKPIIDILGYTISIAVKMTSLAEPDQVVM
                     GQMVFDVVDENQKNKFKELPISTEVWNYISSTTGNIYRIYGSKRE"
     gene            3344..4339
                     /locus_tag="VLA74_14140"
     CDS             3344..4339
                     /locus_tag="VLA74_14140"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HSF51897.1"
                     /translation="MTEYKGRIITHIHESTILRSNPLNDPYVREVIVYVPPNYSQSHS
                     NGYPAAIGLSGFAGNGRTFLNFDPLGENIEERMNRLIADGKLGPMILVIPDCFTKFGG
                     NQYINSTATGRYEDYIVNEIVPFIHSNYNISSFGLWGKSSGGYGSLVLGMKYPEIFKA
                     IACHSGDSAFEYCYLPDFPSAYETFRETGGVKKWFDQFWKKQNRKQKKDFVALSILAM
                     AAHYSPDTSSELGLKLPFNIETGEIIEDVWKMWKALDPVKMINEYQYNLRKLKLLYID
                     CGNKDEFNLHLGSRMIHNKLNKLDIIHSYEEFDGGHSNTSFRYDISFPMICSSIT"
BASE COUNT         1641 a          651 c          754 g         1538 t
ORIGIN      
        1 attggtgtgg ataaatcgaa taaataggaa tgacatacat agcaatgtga acaatattgt
       61 tatattctat ctatttgtta ctttagttat caccaatttc tgtttttaaa ttttagattg
      121 ttatattatt catagactgg tgaatgacct tgtatacttt tacctaaaac ttttcttcct
      181 ttgtgtctgg atttccctga atgaatcttt ttttctattc tctcatcgga tttctttatg
      241 gactcttttt cattgttcac agatttattt ttcatattat ttagaatgtt ctcgctaaca
      301 aaggtatact cttccttact atcttctttc tttattatcc taatttcttt tattttgtta
      361 tccattttac actcaatttc ttttattttc gcaattctct attaaggcaa caatccctgg
      421 gcaataatcc tggtactctt actatccggt tttaggatta gaaatttctg gttgtgataa
      481 taaactattt gtttctctaa tagcaattta attttggaat cttgaaatac gatttttact
      541 ggttttattt gtaatccaac cgatatcaaa tacgtttggt tttgagaaat ttcattttta
      601 taatacctat ttcttgagag atttggaaca attaattcag aagatgatac ttctaatcct
      661 tctccatcag atattatatc accgcgttct atttcatctg gactgacacc tttgagagaa
      721 agacctactc ttgcaggact tgatgcttcg tttactggat catcatgcat ctgaattgat
      781 ttaaccaaaa tttctttgtt tgaaggcaga atttttaatt tatcataaat ctttacacta
      841 ccttgtttga taacacccag aataacagtt ccaactcctt tgacatcgaa gctatggtca
      901 attggaataa ttaaattccc ttcattagat attggagaaa tattattgag ttctattttt
      961 aatgaattaa catcatcaag tattctgaaa ttagctaccg tagtatcttt gatcatctgt
     1021 tgcagtctat catgatcaac atcataagaa tgaaggataa atccctctga aatttgaagt
     1081 gaatccaagg caataatttg ttcagcaaaa tatttatcta atgatttaac atttaagact
     1141 actaattcgg tcatatttat tacttgaaca agagattgta ttttctcagg aaaagtaatg
     1201 ggggaaaccc aagtaaacac cttatcgacc atttttttgt catatagtga aatatcagac
     1261 gttgtaccga gtttacctag atcctttaga atttcgtgat cacctaatac tgcaatattt
     1321 agacttttca atgctaaaaa aatattattt tgtcaataaa attgtttata aagtaaccta
     1381 tcaagtatat catacgtact atagtggtcg atagaaaatc atttcatgtt ttatttctgc
     1441 ctttacttgc ttccggaata gtaataagta cagtaggcac cattttgaaa tttcttgggg
     1501 aaatggtagg ttctaatgga gaaggttttt caataatcgg cgtaagatta ataattggag
     1561 gtgcctgtac aataattata tcattttatg ctcagtacta tcacgagatt tcaaaatcac
     1621 tactcatact caaatttgtt tttatgaatt tcataaaaag acatgaacta tcaagaagat
     1681 gaaacatcga tcaagaaaat taaaacaata ctaaataata aatgcattat tttaatttgt
     1741 taaaagttaa gcttttatat tttataggta tagaaaaaac catgtcccaa ctaagtgatg
     1801 aaaagaaggt ccatgtaatt gttcacggaa atagacaaat ttacgaacaa gtaaagaata
     1861 tgttgataga aaacaatatt aaatctgaga atataactat ggcttctcta gacaaagcag
     1921 gtgaaatagg agaatacgta gcaatggttt ggcctccaat gaatgcaaag gagattataa
     1981 ttagtgaaat tgttggtgat caggcagagg gaaaaggaat gggagcatgg gcatcgatag
     2041 atcaaagaga attatttagg ctatctttat gactagattt tttccaaaat ttctttattc
     2101 aattagtttt aatttatctc tatatactac tttattataa taggaagagg cgaaaagata
     2161 tatcgattga acaaaagcaa acagtactca acttacataa atctggaata ccgatagagg
     2221 taattgcact acagactgac ctagacacac aagagatact aaatataata aaatcagaag
     2281 aaaaaagagt cactgaacaa actttaaatt tgactcctac attggcagaa ttttatcttg
     2341 atgcagtagt tgacgtgaac gaattaatca agaaagcgca gactagaaca tggtctgcat
     2401 tacaggcaaa agagtttaac atatctcctg atgactcgag atatattcta gaaaaatatc
     2461 tcgaatcaaa gataaaactt gtaataatac atgttgatat agtgggattt acaaaacttt
     2521 gtacgacatt atctgctaat aggctagcag acattattag agcttttact caggaaatgt
     2581 caattctaat atgttcctat ggaggatatg tcttaaaatt tgtgggagat gccgttttag
     2641 gattttttat ggttaagaca ggaggtaggg atgaagaaaa gataccgtgc gtaaacgcct
     2701 taaattgtgc tttagcaatg attaaagtta tcaaacatgg aatcaatcct attttaagcc
     2761 aatacgatta ttctgaaata cacgtaagga ttgcagtaga tgttggggaa aatgctgttg
     2821 tacaatatgg atgggagaaa actattatta acacccaaaa tgaaaaattt gaagtaaaaa
     2881 aacccattat tgatatttta ggttatacaa taagtattgc agttaaaatg acttcattgg
     2941 cagaacctga ccaagttgta atgggacaga tggtgtttga tgtggtcgat gaaaaccaaa
     3001 aaaacaagtt taaggaatta ccaatcagta ctgaagtgtg gaactacata tcgagtacca
     3061 ctgggaatat ttaccgcatc tatggaagta agagagaata aataaaatct ttattcaact
     3121 ggttaaaata tagctaggat ttcagttcgt aattatttat acaaatatag aatttttgat
     3181 aagataatga ctagttaaaa caagtatgga agagaaaatt gaaaaccact actgcatgag
     3241 taaaaaaatt taaggaaaaa ccagatatta aaaatcttta ttcaagacat aaaaggtatt
     3301 atatttgtat attatatata cctagtcatc ataaatatta aaaatgaccg aatataaagg
     3361 aagaataatc acgcatattc atgaaagtac aattttacga tctaatcctc tcaatgaccc
     3421 ttatgtaaga gaagtaatag tatatgttcc tcctaattat tcacaaagtc attctaatgg
     3481 atatccagca gctattggat tatctggttt tgcaggaaat ggcagaacat ttcttaattt
     3541 tgatccttta ggagagaaca ttgaagaaag aatgaataga ctaattgccg atggaaaact
     3601 tggtcctatg atactagtga ttccagattg ttttaccaag tttggtggaa accaatatat
     3661 taattcgact gcaactggaa gatacgaaga ttacatagtc aatgaaattg ttcctttcat
     3721 acacagtaat tataatattt cctcctttgg gttgtgggga aaatcttccg ggggatatgg
     3781 atcacttgtt ctgggcatga agtaccccga aatttttaaa gcaattgcat gtcattctgg
     3841 tgattctgca tttgaatatt gttatctgcc tgattttcct agtgcatatg aaacattcag
     3901 ggaaacagga ggggtaaaaa agtggttcga tcaattttgg aaaaaacaaa atagaaaaca
     3961 aaaaaaagat tttgtagctc tgagtattct tgctatggcc gctcactatt caccggatac
     4021 tagttctgaa ctgggcctaa aattaccttt taacatagaa acaggagaaa taatagaaga
     4081 tgtatggaaa atgtggaaag cattagatcc agtgaaaatg ataaatgaat atcaatataa
     4141 cctgagaaaa ctaaaactct tgtatattga ttgcggaaat aaagatgaat tcaatctaca
     4201 ccttggttca agaatgatac ataataaatt aaataagttg gatataatac attcctacga
     4261 ggaatttgat ggtggtcact caaatacaag ttttcgatac gatatttctt ttccaatgat
     4321 ctgttcttca attacctaaa ataagatcaa aatttggcga taaaaaatgt tgatgtcggg
     4381 aaataaatta tttatatttc aatatactag gtaacatatt tccaaaaaaa ttttcatgtg
     4441 gtcaaaacga gaattgttta gtaacctaaa accaaaaaaa aatatagaaa aagaaggtgt
     4501 agtcgtgtta tataacgtat ttgaattcac ttaatatatg atgttttcat aggattgtat
     4561 acaaaaaaat gaatagaaca tact
//
LOCUS       DATIAS010000702         2246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1761179, whole genome shotgun sequence.
ACCESSION   DATIAS010000702 DATIAS010000000
VERSION     DATIAS010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1761179"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VLA74_14145"
     CDS             <1..552
                     /locus_tag="VLA74_14145"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSF51898.1"
                     /translation="GEIKIFGEDIRRNKKILKQIGYIPQRKSIDRRFPLTIKELVSLS
                     ITNKSYVDNVDKVIRYVDLYDNRNKIIGQLSGGQQQRVLIAKALVNNPKMLMLDEPTN
                     ELDQTSQDNFYLLLKQLNDEEKITIIWTSHDLDAVNRLSNKISCINKKMFYHGTKDDF
                     FSNDNNLKKYSESQMQIHMHSHY"
     gene            586..1407
                     /locus_tag="VLA74_14150"
     CDS             586..1407
                     /locus_tag="VLA74_14150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HSF51899.1"
                     /translation="MQEFFDFFLFGYIQRALISGISIVIMCSLIGLFLVLRKQSLFGD
                     AISHMAFGGIAIGTYLNIYPFWTAIIFSASSALMINKIRYYTKLTSDSMVAVLLSFGL
                     GMGVTLISISDGFSVDLFSFLFGSILLVSYEDVLMTVGIAIIVTSIIGIFFKKFIYVT
                     FDEDQAKISGLHVEQLDYLFIVLVAVAVIVSMKLVGILLISSLIVIPNIASLMLNQGF
                     KRTLFISIIISACSVFFGIILSYYFNTAPSGMIVLLSVGIFIAVIISKYFYQNIT"
     gene            complement(1503..>2246)
                     /locus_tag="VLA74_14155"
     CDS             complement(1503..>2246)
                     /locus_tag="VLA74_14155"
                     /inference="COORDINATES: protein motif:HMM:NF024498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSF51900.1"
                     /translation="QSNNIIKTIDIGFVINNNLFLISYVSGLDNYEKYLPTIERMIGS
                     LKPITPTSEIEKEIILHKLFTPVNKNANFLGNNSSKLTIVEFGDYQCSFCARFNKETK
                     NYLVTNFVETGKVRFIFKDFIVNDLPSDKASTLAAEASYCAAEQGKYWDYHDELYRNS
                     NGENTGWVTKDNLKQFANNVRVPDLMKFSDCVELHKYNSLVSENDKLARSIGLTSTPS
                     FILYNGTTPVAIQGAYPYSVFDQVINEMT"
BASE COUNT          735 a          325 c          341 g          845 t
ORIGIN      
        1 ggcgaaataa aaatatttgg ggaagatatt agaagaaata agaaaatttt aaaacaaatt
       61 ggctatatcc cacaaagaaa atctattgac agaaggtttc cacttactat aaaagaattg
      121 gtttctcttt caattacaaa caaatcatat gttgacaatg tggataaagt cataagatat
      181 gttgaccttt atgataatcg aaataaaata attggtcaat tatcaggtgg acagcaacaa
      241 cgtgttttaa ttgcaaaggc actcgttaat aatcctaaaa tgttgatgtt agacgaacca
      301 acaaacgaac ttgatcaaac aagtcaagat aatttctatc tccttttaaa gcaactgaat
      361 gatgaagaaa aaattaccat tatatggaca tcacacgatc tggacgcagt aaatcgactc
      421 tctaataaaa tatcctgtat taataaaaaa atgttttacc atggaacaaa agacgacttc
      481 ttctctaatg ataataattt aaaaaaatac tctgaatcac agatgcaaat tcatatgcat
      541 agtcattatt aataaaatga gatttgaagt tgaatgttga tttaaatgca agagtttttt
      601 gatttttttt tgttcggata tattcaacga gccttaatct cagggatttc aattgtaata
      661 atgtgttcat taattggatt atttcttgtt ttaaggaaac aatcactttt tggggatgcg
      721 atttctcata tggcttttgg tggaatagct ataggaacat atttgaatat ttaccccttc
      781 tggactgcaa taattttttc tgcttcatct gccctgatga taaataaaat acgatattat
      841 actaagctga cctcggactc aatggttgct gtcttgttat cttttggtct tggaatggga
      901 gtaactttga taagcatatc cgatggtttt tctgttgatc tattcagttt tctttttgga
      961 agcatcctgt tggtaagcta tgaagatgta ttaatgactg ttggaatcgc tattattgtt
     1021 acgtctataa ttggtatatt tttcaaaaaa tttatttatg ttacttttga tgaagatcaa
     1081 gcaaaaatta gtggtttgca tgttgaacaa cttgattatt tatttatagt tttggttgca
     1141 gtagctgtaa tagtttctat gaagttagtt ggaattcttc ttatatcttc cttgatagtc
     1201 attccaaata ttgcatcgtt gatgttaaat caaggtttta aaagaactct ttttatttct
     1261 ataataatat ctgcatgttc tgtttttttt gggataattc tttcatatta ttttaatact
     1321 gctccaagtg gcatgattgt attgttatca gttggtattt tcattgcagt tataatatcc
     1381 aaatattttt atcaaaatat cacttaatat tttcagtaat acttcaagag tcaaataaat
     1441 atgtatgtat tatgcttagc ctttacagaa aataagatgg gtctatccat aaaaagatgt
     1501 atttaagtca tctcatttat aacctgatca aatactgaat atggatatgc tccctgtatt
     1561 gcaactggcg tagtaccatt gtatagaata aatgatggag tacttgttaa accaatactt
     1621 cttgctagct tatcattttc acttactagg gaattgtatt tatgtaattc aacacagtca
     1681 gaaaacttca ttaaatcagg cactctgacg ttattagcaa attgtttcaa gttgtcttta
     1741 gttacccacc cagtattctc tccatttgaa tttctataca attcatcatg ataatcccaa
     1801 tatttgcctt gttctgctgc acaatacgat gcctcagctg ctaatgtaga tgccttatca
     1861 ctaggaagat cgtttactat aaaatctttg aaaataaatc taacttttcc agtttccaca
     1921 aaatttgtga ccaaataatt ctttgtttcc ttattaaaac gtgcgcaaaa cgaacattga
     1981 taatctccaa attcaactat agttaatttt gaactattat ttcccagaaa attggcattt
     2041 ttatttacag gcgtaaataa tttatgtaat attatttctt tctcgatttc tgatgttggt
     2101 gtaataggtt ttaaagatcc tatcatcctt tctatcgttg gtaaatattt ctcgtagtta
     2161 tctaaacctg agacataaga tattaagaat aaattattgt ttataacgaa tcctatatct
     2221 atggttttga ttatgttatt ggattg
//
LOCUS       DATIAS010000703         2140 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1624331, whole genome shotgun sequence.
ACCESSION   DATIAS010000703 DATIAS010000000
VERSION     DATIAS010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1624331"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..611)
                     /locus_tag="VLA74_14160"
     CDS             complement(<1..611)
                     /locus_tag="VLA74_14160"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSF51901.1"
                     /translation="MKKVAVAGAGYAGLFSAANLLASGNEEKKFDITVFDKNPYHQLL
                     QQIHLVSAGVKKPEDISFSINELLKNEISFINESVLSLDLGNKVITTLSDNPKNSIKQ
                     EYKFDYIIIALGSSNAYFNIKGAQENAFSFRSLDDAITLRKKLEEIQSRSNIVICGGG
                     ATGISLAGALTDEYISTFKVTVIEAQEDILPGWDLKLISEIKN"
     gene            complement(1105..1827)
                     /locus_tag="VLA74_14165"
     CDS             complement(1105..1827)
                     /locus_tag="VLA74_14165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51902.1"
                     /translation="MDIKEMLYDTLDQIGKEKIHIELNKDHSVSKKIILNILQDLLFR
                     FKVSEVKHLEYVEYNDKNGEDKKEEEVELIVLCEALLHFLLTASGYPSQRKIIFNNQE
                     IDIVIPDLRTLKSKPKNSVIIKFYKAGFPLEDLKNIEIIQPHTNNIWIVSTIPIPPKY
                     TNYVLYRNSDSEKNNILYPVNDNLTEKGININAFQNVGPNKDKDGTFSSELDIKDFSN
                     ILIDIYSFLKETNNKSFKFMHI"
     gene            1876..>2140
                     /locus_tag="VLA74_14170"
     CDS             1876..>2140
                     /locus_tag="VLA74_14170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51903.1"
                     /translation="MAKIAVILLYISLALLIIYGLDTFVASLKQPQLDGSPGTGFLPM
                     NEAARGAIFGAGAVILSIIGFVIGRKEPSKAISILLLVNGFLII"
BASE COUNT          684 a          334 c          321 g          801 t
ORIGIN      
        1 aaatttttaa tttctgaaat aagtttgaga tcccatcctg gaaggatatc ttcttgtgct
       61 tcaattactg tgaccttgaa tgtagatata tattcatcgg tcagagcacc tgctagactg
      121 attccagttg cgcctccccc acagataaca atatttgatc gcgactggat ctcctctaat
      181 ttcttacgca aggttatagc atcatcaagt gacctaaaag aaaaagcatt ttcctgcgca
      241 cctttgatat taaaataagc atttgacgat cccagagcaa ttatgatata atcaaatttg
      301 tattcctgct ttattgaatt ttttggattg tcactcagag tcgtaattac tttattacca
      361 agatctaaac tcaatacaga ttcattgata aaggatattt cgttcttcaa taactcgtta
      421 atagaaaaag atatgtcctc aggtttttta acacccgcag aaactagatg tatttgttgt
      481 agtaattgat ggtaaggatt tttatcaaag accgtgatgt caaatttctt ttcttcattt
      541 ccactagcca acaaattggc ggctgaaaat aaccctgcat atccagctcc ggcaacggca
      601 acttttttca atcaaatcac ataaaattat gtatttatta tattcctttt tatgatttca
      661 gatgaattac tagtactata tattttgaaa gaatgagatc caatgttacc taacagagat
      721 ttgtgtaaat atattattca ttattatctt tattcttctt tttttactag ataaaagttt
      781 tgataatagc tatttgttgt taggatattt cataaaactt taactagaat atgaaggaga
      841 tcgataaaat taattcagaa tttttaaccc atgcaaattt atattattac gttagaagtt
      901 gcaaactaaa atagctgttg aatatcattt cttgtatacg tatgaaaatc gatactatgg
      961 agtaaaatgt ttacaacgat aaatcaacaa aatgaatttt ctacatgact gtgcatcaaa
     1021 acaaaccagt tgtgtatata attcaataaa gatcttaatt tattttagtc gatctatgat
     1081 tttttaaaaa gattgattat atccctaaat atgcataaat ttgaaacttt tattatttgt
     1141 ctcttttaag aagctataaa tgtcaatcag aatgttacta aaatctttta tatctaattc
     1201 tgatgaaaaa gtaccatcct tatctttatt tggaccaaca ttttgaaacg cattaatatt
     1261 aatacctttt tcggtcaagt tatcatttac aggataaaga atattgtttt tttctgaatc
     1321 actatttcta tataaaacat aatttgtata tttaggcggg atgggtatag tagagactat
     1381 ccatatatta ttagtatgtg gttgtattat ctcaatattt ttcaaatctt ctaaagggaa
     1441 acccgccttg taaaatttta ttataacaga attctttggt ttgcttttca gtgttcgtag
     1501 atctggaatc actatatcaa tctcttgatt gttaaatatg atttttctct gtgatggata
     1561 tccggatgct gtgagtagaa aatgaagcaa tgcttcgcac aaaacaatta attcaacttc
     1621 ttcctctttc ttgtcctcac cgtttttatc gttgtactca acatattcga ggtgttttac
     1681 ttcggaaact ttgaatctga ataataagtc ttgcaatatg tttaagatga ttttttttga
     1741 aactgagtgg tctttgttta actcgatatg aattttctct tttccgattt gatccaaagt
     1801 atcataaagc atttccttga tatccataaa aggatttatt gataggttta ttaaatatct
     1861 tgatatagaa aaaatatggc taagatagcg gtcatattat tatatatttc acttgcttta
     1921 ctcataatat acggcttaga tacgtttgtg gcttctttga aacaaccaca attagatgga
     1981 tctccaggaa ctggattttt accgatgaat gaggcggctc gaggagcaat atttggcgca
     2041 ggcgcagtaa ttctttctat aatcggattt gttatcggca gaaaagagcc ctcaaaagcg
     2101 atctctatcc tgttgcttgt caacggattt cttatcattt
//
LOCUS       DATIAS010000704         2092 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1489661, whole genome shotgun sequence.
ACCESSION   DATIAS010000704 DATIAS010000000
VERSION     DATIAS010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489661"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1005
                     /locus_tag="VLA74_14175"
     CDS             <1..1005
                     /locus_tag="VLA74_14175"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purple acid phosphatase"
                     /protein_id="HSF51904.1"
                     /translation="DTKSIIAFKGSKNITGSDNGDGKNDTKSIIAFDRLESNDDDENS
                     ESKREKESNHKSDFNFVAVGDWDCKSETKDTVENILDHDPEVVLALGDLSYNGKAECW
                     LDIIEPISEKTKIAIGNHETDSSKILRDYMQYFDLEKQYYSFNYKNVHFIGLSTEIPY
                     EEGSKQYEFVVQDLKKYSKDPSIDWIVAFFHRQAYSSGGGPDDEDDFTETYHPLFDKY
                     NVVLALQGHFHAYERSYPITFNSEDEGKPIVTNTDPNTYINPKGTIFVTAGTGGAHDM
                     KISKSKPYSAFGLDGEFGIVNISVENDGTVLKSSFIENNGDEDEYDQFEIIKEKMKNK
                     "
     gene            complement(1873..>2092)
                     /locus_tag="VLA74_14180"
     CDS             complement(1873..>2092)
                     /locus_tag="VLA74_14180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51905.1"
                     /translation="LFKHSTKESMVSALRRRLINIYGPEFLFKHSTKESMVSALRRKE
                     CVCTRKGYSNHSYKVWNKCIIHRYTYGP"
BASE COUNT          772 a          271 c          320 g          729 t
ORIGIN      
        1 gatactaaat cgataatagc atttaagggt tctaaaaata taaccggttc tgataacggt
       61 gatggaaaaa atgatactaa atcgataata gcatttgata gacttgaatc caatgatgat
      121 gatgaaaatt cagagtcaaa aagggaaaaa gaatctaacc ataaatcaga ttttaatttt
      181 gtagctgtag gagattggga ctgtaaatct gaaactaaag atactgtgga aaacattttg
      241 gaccatgacc cagaagtcgt tctggcacta ggagatcttt catataatgg taaagcagaa
      301 tgttggctgg atataattga accaatatca gagaaaacta aaattgcaat aggtaatcac
      361 gaaactgatt catcaaaaat tttgagagat tatatgcaat atttcgactt agagaaacaa
      421 tattattcat ttaattataa aaatgttcac ttcataggat tatctacaga aattccatat
      481 gaagaaggat caaagcaata tgaatttgtt gtacaggatc ttaaaaagta ttctaaagat
      541 ccatctattg actggattgt tgcatttttc cacagacaag catacagttc cggaggaggt
      601 ccagatgatg aggatgattt tacagaaaca tatcatccat tatttgataa atataatgta
      661 gttctggccc tacaaggaca ttttcatgca tatgaaaggt catatccaat tacttttaac
      721 agcgaagacg aaggtaaacc gattgtaact aatacggacc ccaataccta cataaatccg
      781 aagggaacaa tttttgtaac tgcaggaact ggaggagcac atgatatgaa gatttcaaaa
      841 agtaaaccat attcagcttt tggattagac ggcgaatttg gaatagtaaa tatttctgtg
      901 gagaatgatg gaaccgtatt aaaaagttca tttatagaga ataacggtga cgaagacgaa
      961 tatgaccagt ttgagattat taaagaaaaa atgaaaaata aataataatc atagttacat
     1021 tattttctag aatgaaatat tatagcaaat agtaaagttt gcatagatac acttcatttt
     1081 atagttacac aaggagatac aagacctaaa gaaatacttc gaaaatgtta aatatagtaa
     1141 agaattaaca gggaaatcaa aatacaattg aagacacaaa ttccttaagg agaagaactt
     1201 atttttgttt atttatatta tttagtaatt aaacatctca aaaatttgtt aatatattct
     1261 ttaattatat tttcttagat gttgtttttc gtttctttgt tttttttttt ttgaagctag
     1321 ttattatttt tcctcagaat agatctaagt gaaatggcga ttaactacac ccactagcaa
     1381 gtaaataatg aatccaagtg aaaaggcaga aaaagcgtga ctaattattt ttgattttat
     1441 gttcgtaact aattttaatc caatcttatc atctgaaaat ctaaatgtta ttcgggacat
     1501 atctgatatg attaattatt aaaaaaatca atctattatg gatttttcta tttttttcta
     1561 attttatatt acatatattt tttactgaca attttattag aagaatatta aaaggctttt
     1621 tttaattttc caattcacct tttatcttta atcgaatttt ttatttatca atattgaatt
     1681 ttatatatga agaacaattg taatgcaatt atatatacat aatagattat atttcaatcc
     1741 tgttcttttt cgtataataa tattatttat caaaaagatc tacttctacc tttgaaaaaa
     1801 gtaattaccc ttgtaatcac agtcgattga taaacttact taatggatgt tttatataaa
     1861 ataaatttga tcttagggac catatgtgta tctatgtata atacatttat tccatacttt
     1921 gtatgaatga tttgaataac cttttcttgt acaaacacat tcctttcttc gcaatgctga
     1981 taccatagat tcctttgtgg agtgtttgaa taagaattcc ggtccatata tgtttatgag
     2041 ccttcttcgc aatgctgata ccatagattc ctttgtggag tgtttgaata ag
//
LOCUS       DATIAS010000705         3766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_673070, whole genome shotgun sequence.
ACCESSION   DATIAS010000705 DATIAS010000000
VERSION     DATIAS010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673070"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VLA74_14185"
     CDS             <1..312
                     /locus_tag="VLA74_14185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51906.1"
                     /translation="MIVGIEGIISKIHKHKSIKFTDSVEKQIVEIASKNPRKHYGLPF
                     STWSLRVLAGFIIKEMKLVDSISHAEIRNILLKHGIKWRKSKMVLANSKDPEYDIKKV
                     H"
     gene            317..880
                     /locus_tag="VLA74_14190"
     CDS             317..880
                     /locus_tag="VLA74_14190"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51907.1"
                     /translation="MRYNTPTESVLLYQDEKGPIVAKTYGGTSWSPVQSKIEKAQKIN
                     GILNIFGVYDLTNDQMYTHSYRKKTGKQFLDFIKQIDQKYNSYIKQIFLVLDNISIHR
                     SKKVRETIQKYYPRIYLVFLPTRAPELNLIEVRWMWMQRQAVNNSTFENECDIGKAVT
                     DWTRNYNKKHGRAIINILQEETIGVFT"
     gene            complement(901..2283)
                     /locus_tag="VLA74_14195"
     CDS             complement(901..2283)
                     /locus_tag="VLA74_14195"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HSF51908.1"
                     /translation="MIQNDLTIKATFNDISESSTLKFEEEKKKDIEYIMNRLVDPKSK
                     ITKDEIKNIGTLLVDKLFTPNIKKHFSDAKRKATNKGLRIRLKIESFDISNYPWETLY
                     HEGKYLAATIDTPLTRYITVNETEFKKKYGKPMKILIIGASPAAVGLPTVQVEREIQT
                     IENVLQGEIDNGFIKLDKEPIGEARKIMSHLNNEQYNVVHFIGHGVFKDNKGYLALED
                     EKGGLDPADHQRIGQMFQNQKSLGLVILNACQGAVPSYENSILSTYKGFGGLAPELVK
                     VAGVPSVIAMRYSITNQMAHDFSKIFYPNLLKRPIDEIMQIVRQNILVDSNADPREFT
                     APVLFMNSPDGIIFSPAETSGADDMAISPSLEVKIDQLKNYHEQLINLSEAATLKGFW
                     MLVWNIYKENKNELDPIILKEIQKMITIVPTLFIEREEKLDEGLEEQARSLKKTIMRN
                     FNKLMSVIPP"
     gene            2756..2881
                     /locus_tag="VLA74_14200"
     CDS             2756..2881
                     /locus_tag="VLA74_14200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51909.1"
                     /translation="MKIEDDNNKAEGFMYPDNRTDGENKFYVGYDNLLKEVNNLK"
     gene            complement(3324..>3766)
                     /locus_tag="VLA74_14205"
     CDS             complement(3324..>3766)
                     /locus_tag="VLA74_14205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51910.1"
                     /translation="NSDLPDLFFDKIRTIDRSNSAIFAETRIRGGKIENVFYADKKNI
                     QLFYLHTLSVNMILNLYKLEKQYLFEIFNNFSSIIKYIVYFGFFLININVYLDTSNPL
                     IWDYMITLISFIGAPVTNSLVKNLIFYIIKRNMRSFLEDSKKTT"
BASE COUNT         1352 a          525 c          533 g         1356 t
ORIGIN      
        1 atgatagttg gtatagaagg tataatatct aaaatacata aacataaatc aattaaattt
       61 acagattcag tagaaaaaca gattgtagaa atagcaagca aaaatccacg aaaacattat
      121 ggattgccat tttctacatg gtcattgcgt gtactggctg gatttataat taaagagatg
      181 aaactggtag atagtataag ccatgcagag attagaaaca tcctactaaa acatggaatc
      241 aagtggagga agtcaaaaat ggtattagca aatagcaagg acccagaata tgatataaaa
      301 aaagtacatt gaccaattga gatacaatac accaactgaa tcagtattgt tatatcaaga
      361 tgagaaagga ccaattgtag caaaaacata tggaggaaca tcctggtcgc cagtacaatc
      421 caagattgaa aaagcacaaa aaatcaatgg tattttgaac atatttggtg tctacgatct
      481 cacaaatgat caaatgtata cacattccta caggaagaaa acaggaaaac agtttctgga
      541 ttttatcaaa cagatagatc aaaaatacaa ttcatatata aaacaaatat ttctagtact
      601 ggataacata tccattcaca gatccaagaa ggtacgagaa acaatacaaa aatattatcc
      661 aagaatatat ttagtatttt taccaactag ggctccagaa ttaaacctga tagaagtaag
      721 atggatgtgg atgcaaagac aagcagtaaa caattctaca tttgaaaatg aatgtgatat
      781 aggaaaagca gtaacggatt ggactagaaa ttataataaa aaacatggta gagcaatcat
      841 aaatatttta caggaagaga ctataggtgt gtttacataa ctgttaacgt aagcaacttt
      901 ttatggtgga attactgaca taagtttgtt aaagtttctc attatagtct tctttagtga
      961 cctagcttgt tcctcgaggc cttcatccaa tttttcttca cgttcgataa ataaagtagg
     1021 aactatagta atcattttct gaatttcctt taggataatt ggatcaagct cgtttttatt
     1081 ttccttgtaa atgttccata ctaacatcca gaagcctttt agggttgcag cttcacttaa
     1141 gttaattaat tgttcatggt aattctttaa ttgatctatt ttgacttcta gagagggact
     1201 gattgccata tcgtcggcac cactggtttc agccggactg aatatgattc catcaggtga
     1261 attcataaat aaaacaggtg cagtaaattc tctagggtca gcatttgaat caacaagaat
     1321 attctgtcta actatttgca tgatctcatc gataggtctt ttaagaagat ttggataaaa
     1381 aatctttgaa aagtcatgtg ccatctgatt agtaatacta tatctcatag ctattactga
     1441 tggaacacca gctaccttta caagctctgg agctaaacca ccaaaacctt tgtaagtaga
     1501 aagaatggaa ttttcatatg atggtactgc tccttggcaa gcatttaaaa tcaccaatcc
     1561 taaagatttt tgattttgga acatttgtcc tatcctttga tgatcagctg gatctaggcc
     1621 gcctttttcg tcttctaaag ctagatagcc tttattgtct ttgaatacgc cgtgacctat
     1681 aaaatgaact acgttatatt gttcattatt caagtgactc ataatctttc tagcttctcc
     1741 tataggttct ttatctagtt ttataaaacc attatcaatt tcaccttgta atacattttc
     1801 aattgtttgt atctctctct ctacttgaac tgtaggaagt cctacagcag cgggacttgc
     1861 acctataatt aaaattttca taggtttacc atatttcttc ttaaattctg tctcatttac
     1921 agtaatatat cttgttagag gagtatctat agtagcagcc aagtatttgc cttcatgata
     1981 taatgtttcc catggatagt tagaaatatc aaacgattca atttttaaac ggattctaag
     2041 acctttattg gttgcttttc tctttgcatc agaaaaatgt ttttttatat ttggagtaaa
     2101 taatttatcg actaaaagag ttcctatatt ctttatttcg tcttttgtta ttttgctttt
     2161 tggatctact agtctattca tgatatattc aatgtccttc tttttttcct cttcaaattt
     2221 caaagtgctt gattctgaaa tatcattaaa agtagctttt attgttaaat cattctgaat
     2281 caacaattca taatccaaat aatccattta gagtagtaat tacatgcttt ttattaaata
     2341 tattttctag gaaagaaata ttagtaatgt tgtttgtgca aattattatt tgtattttct
     2401 tccatcggtt cttttattac ttttatctgt agtattctat gatctttgaa tcttctccta
     2461 tttgtaagaa taataagtac aataagatta aagcttttgt tataaaattt gttatttaaa
     2521 actatactaa aaactcaata atgatttcat tttgatatta taatcattaa agaactaact
     2581 gcaatgagta ttaaactatt caaaaggtat aaaatttaaa ttttgaatta caaatatggt
     2641 tatatacttc tacaaaatat tataattaat aatagttaat atgcacttaa aaatattaaa
     2701 tgaggtaaaa cctaatattt tgtaatatat tccattcgga gtagctacta ttgagatgaa
     2761 aattgaagat gataataata aagctgaagg atttatgtat ccagacaata gaactgatgg
     2821 cgaaaataaa ttctatgtag gttatgataa tttattaaaa gaggtgaata atcttaagtg
     2881 aacacgacag ataaacctag tatttataat ttaatgaaaa tcatattatt gtaatcattt
     2941 taatcttctt taaaacaagc tccttttatt atatttttca tatttcatca agatatttat
     3001 tcacttaatg tcttattttc ctgtaattac aatcttatcg ataaggtact tttatatgaa
     3061 gaatattctg ttatagtcaa taattccttt tacttcgcaa tgataatttt gcggcgccta
     3121 aaaattattt taaaagtatt gcaatagctt taatattaat tctattattg gattgtcata
     3181 aatatttcta ctattaataa aagataataa ataaatagtt ttatacaata tttctattta
     3241 cttatgtgca gtacattatg gacattaatg aatatattta tttttaaaaa gattttaaat
     3301 tgagacatat taatttataa cattcatgtt gtttttttag aatcttcaag aaatgaacgc
     3361 atatttcttt ttataatata aaaaataaga ttttttacca aggaatttgt gacaggtgct
     3421 cctataaatg aaatcaaggt aatcatataa tcccatataa gaggattaga agtatccaag
     3481 taaacattaa tattaattag aaaaaatccg aaatatacaa tatatttaat aatggaagaa
     3541 aaattattga atatttcgaa caaatattgc ttttctaatt tatagagatt taaaatcata
     3601 tttacagata aagtgtgtaa ataaaatagc tgtatatttt ttttatctgc ataaaaaaca
     3661 ttttctattt ttcctcctct tattctggtt tcagcaaata tggcactgtt agacctgtca
     3721 atggtacgga ttttatcaaa aaataaatct ggcaaatctg aatttt
//
LOCUS       DATIAS010000706         3282 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1352955, whole genome shotgun sequence.
ACCESSION   DATIAS010000706 DATIAS010000000
VERSION     DATIAS010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1352955"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1250)
                     /locus_tag="VLA74_14210"
     CDS             complement(75..1250)
                     /locus_tag="VLA74_14210"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSF51911.1"
                     /translation="MKNLYFTPYGVGLGHASRLINIADKIQDEEIKVKFSSYGEAVEF
                     ISRCGYNCSDVPPVEFSWNTHGSFSFKNTISNIPTWFTNFSIQVIREVENMINFSPHL
                     VVSDSRLSSIISAKLLGIPSIVILNQIKLLLSPRLHSFKIARLFEEINAEFMGIFWSI
                     SDEILVPDLPPPYTISENNTWNTGSVTKKIKYIGFISPPHRISENQIKKVLKLLNFSK
                     SKPIIFFHISGPPKTRSPIVTKILKMKESFGSNLQFIISGGKPNGETIPRKISENGWY
                     YEWCPIRDELFALSDIIVIRGGHTAISQAIQFGKPIISIPIENHAEQINNSVKISRIG
                     LGTKLDNNEITPKKIVESIYEILDNSNYLMKSNEIMNISNKLNGVENVVDIVRSYIR"
     gene            complement(1332..2321)
                     /locus_tag="VLA74_14215"
     CDS             complement(1332..2321)
                     /locus_tag="VLA74_14215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51912.1"
                     /translation="MNRTEQSNVNSTEDNSKKNDQEQNLISLNLNLNTLIEFKNSLIE
                     EQKNGETKIQEINEKIERTKKEVDKERQSLEELRIRLKEINDVKDEEFPKFMELKDQV
                     MKARNQMKVIDEKTGVKNSKERTNIKQLTRTLEQLERDIQTKKLSKDEERRLVVKSKE
                     IATKLHALKVIHKKEDQFRMISTQYGSLKSKINDIFDKKSEFGNKIGDLKKVLDNLLD
                     IRENLYEERRKIIRAMRESAAKLEMVDTQINAIEFRKSKITAIGSKRRFRDLRDKPYV
                     GLQSPKERTKRNKENIQIWNSMKEQALKKMSSGEKLTFDEMKLIYSDMSSSEL"
     gene            2448..2831
                     /locus_tag="VLA74_14220"
     CDS             2448..2831
                     /locus_tag="VLA74_14220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51913.1"
                     /translation="MDDFDKNFPEFDWKNTPAYKHPLGKDCPCPKHEYIREQIQLART
                     INESEAQNKPRAQITLKFCPDHYDVYFKEVIPSMPFKHRLMTKFALKLGAIVIQRIPY
                     MQSDQCFYCKFGSGGFDKRQELPPI"
     gene            complement(2828..>3282)
                     /locus_tag="VLA74_14225"
     CDS             complement(2828..>3282)
                     /locus_tag="VLA74_14225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51914.1"
                     /translation="SISSQEIIEEYIEYGNLYEYLVKHDDIAIASKAGIMTGILHNSG
                     YTFIDNKSQNFLVSKDKDLIRIDLGLMQSNISLFAKSMDIGTFLGSVLDLESKKYHEI
                     EREYLDGYIKTTGSVIPYLSVILRNVLSLGFVNNHNKMMKNMTKKYNS"
BASE COUNT         1006 a          565 c          429 g         1282 t
ORIGIN      
        1 cagactacaa aaaatcttca ttcagattct catttttaag aaaagaaatt aaaaatgtca
       61 catttattat gaattcatct aatatacgac ctaactatat cgacaacatt ctcaactcca
      121 tttagtttgt tgcttatatt cattatttca ttagatttca tcaaataatt tgaattatct
      181 aatatctcat aaatggattc aacaattttt tttggagtaa tttcattatt gtctagtttt
      241 gtgccaagtc caattctcga tattttaact gaattattta tttgttctgc gtggttctca
      301 atcggtattg aaattattgg ttttccaaac tggattgctt gagaaattgc agtatgacct
      361 cctcgtatca ctatgatatc acttaatgca aaaagttcat cgcgaattgg acaccattcg
      421 taataccatc cattttcaga tatttttctt ggaatcgttt caccatttgg tttaccccct
      481 gaaatgatga actgaaggtt actaccaaat gattctttca tttttaatat tttagtaaca
      541 ataggacttc ttgttttggg aggcccgctt atgtgaaaaa aaattatagg ttttgatttc
      601 gagaaattaa gtaatttcaa tactttttta atttggtttt ccgagattct gtgaggtgga
      661 gatataaatc caatatattt gatttttttt gttactgaac cagtattcca ggtattattt
      721 tctgaaatag tgtatggagg aggtaaatca ggtacaagta tttcgtcaga tatagaccaa
      781 aagataccca tgaattcagc gttgatctct tcaaataatc gcgcaatctt gaaagaatgt
      841 aatctaggag atagcaagag tttaatttga tttaatatta ctattgaagg aatacctaat
      901 aatttggcag agataattga agataatctt gagtcagata ctactagatg tggtgaaaag
      961 ttaatcatat tttcaacttc ccttattact tgaatcgaaa aattggtaaa ccatgtagga
     1021 atatttgaaa tagtattttt aaatgagaag ctcccatgag tattccatga aaattcaact
     1081 ggtggtacat ctgaacagtt atatccacaa cgagaaataa attccacagc ttccccataa
     1141 gaagaaaatt taaccttgat ttcttcatcc tgaattttat cagctatatt gattaaacga
     1201 ctagcatgtc ctagccccac gccataagga gtaaaatata aatttttcaa ttgctattac
     1261 attttaatga tgacataaat atttaaaaga ttaaattcat taagcaaact aaatgaagtc
     1321 acacaaatcg tctacagttc agatgaactc atatcactat agatcaactt catttcgtca
     1381 aaagtaagtt tttctccact tgacatcttc tttaatgcct gctctttcat agaattccat
     1441 atctggatat tctctttatt tcttttggtt ctttctttag gtgattgtaa acctacgtac
     1501 ggcttatctc gtaaatctct aaatcttctc ttgctaccta tagcagtaat ttttgatttt
     1561 ctaaattcta tcgcattaat ttgagtatca accatttcta attttgcggc actttctctc
     1621 attgctcgga ttatttttct cctttcttcg tacaaattct cacgtatgtc caagagattg
     1681 tctaacacct ttttcagatc acctattttg tttccaaatt cagatttttt atcaaaaatg
     1741 tcattgattt ttgactttaa actgccgtat tgagttgaaa tcatcctaaa ttgatcttct
     1801 tttttatgaa ttactttcaa agcatgaagc tttgtagcaa tttctttcga tttgacaacc
     1861 aatctcctct cttcatcttt cgacaatttt tttgtttgta tgtctctttc aagttgttct
     1921 agagttctag ttaattgttt gatgtttgtt ctttctttac tattttttac acctgttttc
     1981 tcgtcaatta ccttcatttg gtttctagct ttcataacct gatctttaag ttccataaat
     2041 ttgggaaatt cttcatcctt tacatcgttt atttccttta atcttatcct tagctcttcg
     2101 agtgactgtc tttccttgtc aacttctttt tttgttctct ctattttctc atttatttcc
     2161 tgaatctttg tttctccatt cttctgttcc tctattaacg aattcttaaa ttctataagt
     2221 gtatttagat tcaaattgag agaaataaga ttttgttctt gatcattttt ctttgaatta
     2281 tcttcagtgc tattgacatt actctgttcc gttctattca cgccgctttg actttttata
     2341 aattatcaaa aatatatatt tttataatca gattagttat taatacttac atcgcatttt
     2401 tacatcccac aatttatatg atattacttc taatatatta gagaagaatg gatgattttg
     2461 ataagaattt tcccgaattc gattggaaaa atactccggc atataaacat ccgttaggca
     2521 aagattgtcc ttgcccaaaa catgagtata taagagaaca aatacaactc gctagaacaa
     2581 ttaacgagtc cgaagctcaa aataaaccac gtgcccaaat cactttaaaa ttttgcccag
     2641 atcattatga tgtttatttt aaggaagtca ttccctctat gccctttaaa catagattaa
     2701 tgacgaagtt tgcattaaaa ctaggtgcca ttgttattca aagaatacct tatatgcaat
     2761 ctgatcaatg tttttactgt aaatttggat ctggagggtt cgacaaaaga caagagcttc
     2821 ctcctatcta gctattatat tttttggtca tatttttcat catcttgtta tgattattta
     2881 caaaacccaa agatagcaca tttcttaaaa ttactgataa gtaaggaata acacttcctg
     2941 ttgttttaat atatccatct aaatactctc gttctatctc gtgatatttc ttcgattcta
     3001 agtcgagaac gcttcctaaa aatgtaccta tatccatact ttttgcgaat aatgaaatat
     3061 tcgattgcat tagacctaga tctattctaa ttagatcttt atcttttgat actagaaaat
     3121 tttgactctt attatcaata aatgtataac ctgaattatg taatatacca gtcattattc
     3181 cagctttgct agcaatagca atatcatcgt gttttaccaa atattcataa agatttccat
     3241 attcaatata ttcctctata atttcttgac tggaaatgga aa
//
LOCUS       DATIAS010000707         2651 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_673187, whole genome shotgun sequence.
ACCESSION   DATIAS010000707 DATIAS010000000
VERSION     DATIAS010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673187"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..852)
                     /locus_tag="VLA74_14230"
     CDS             complement(178..852)
                     /locus_tag="VLA74_14230"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51915.1"
                     /translation="MDSTGSFISINAKSLVVILGVTFFFLGLFPILSLSEVYGDSSGI
                     TKLKKLGNKIGDLDFNSGSFFGNVETCSDLSTCTGTDKDDIIYGGLHSQVFALDGDDM
                     IYGGADSHLYGGKDDDLILGGPGKALIDGGNGDDVMLGGLGNQLIVGGKGNDKLFGGT
                     GDSVMDGGTGANHFDCPISLLGLARSVVLDYNPDNGDTIAGQCKIVNTEGNTNSDDIP
                     DIDSFN"
     gene            complement(1321..2109)
                     /locus_tag="VLA74_14235"
     CDS             complement(1321..2109)
                     /locus_tag="VLA74_14235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51916.1"
                     /translation="MNSLKFVIFVPGTLLLISMLASTTTIWQSSVYAQPIGEGTGNIT
                     TVSNSTTIPMKNIENATSGVEKMDLSKLKTILATPFTSITAISLIPGLQVSGVNFGDT
                     QISVTVKQIQSPGNTTNMTTPITVTAVRIPVSDLEDLLSLVKDSGLLGDKAGINIPGM
                     INDNPLNNLLGGSSGLIGGDQNSKDPISSVRPFQLLKDIQFGTGSIVGGDWTYPRTVT
                     MGFLDIRSFFGIQENIREPASAHLITIFVVPYVGVTNLGSVPLH"
     gene            2468..>2651
                     /locus_tag="VLA74_14240"
     CDS             2468..>2651
                     /locus_tag="VLA74_14240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51917.1"
                     /translation="MIILYRNSHKYSFTLMALLIAVMIGGSVLNANAQNPENKPNFLV
                     IVGDDFGYSDIGAFGSE"
BASE COUNT          968 a          429 c          351 g          903 t
ORIGIN      
        1 gtattccgta aactgagacc aagaaaatac agataaagag aatacataac aataaagatg
       61 agggttctgt ttctctcaaa tctaattttc atatcataaa tagaacgtgc ctagctatag
      121 cttttactgc ttaacttaac agagcctata aatctgatag aatattaaaa aatatgacta
      181 attaaaggaa tctatatctg gtatatcgtc agaattggta tttccttctg tattaactat
      241 tttgcattga cctgctattg tatctccatt gtctggatta tagtcaagta caactgatct
      301 ggctaatcct aaaagtgata tgggacagtc aaagtgattg gcacctgttc ctccatccat
      361 tacactatct cctgttccac caaaaagttt gtcatttcct tttcctccta caattaattg
      421 atttccaaga cctcccaaca taacatcatc accatttcca ccatcaataa gtgcctttcc
      481 aggacctcct aggatcaaat cgtcgtcttt tccaccgtat agatgactat cagcaccgcc
      541 ataaatcatg tcatcgccat caagagcaaa tacttgtgaa tgaagtccac catatattat
      601 gtcatcttta tctgttccag tacaggttga aagatcagaa caagtctcaa catttccaaa
      661 gaaagatcct gaattgaaat ctaaatcacc aattttattc cccaattttt ttaatttggt
      721 aatccctgat gaatctccat aaacttctga caaggataaa attggaaata gacctaaaaa
      781 gaaaaatgtc actcctaaaa taacaactaa tgatttagca ttgatagata taaaagaacc
      841 agtggaatcc acaatgacaa ttatttaaat tctgcttaat taacattaca caaataattt
      901 ctgttttttt cttttcaata aatattagaa acaaaattct gaattttatt ttaaagataa
      961 ttaaaattat tttgacattt tctaattatt ctacttttcg aaattcaatt caatataata
     1021 tctctttaaa aaagacaaga aaacaaaatc ttgtaaacaa taatcagaaa taaattgtaa
     1081 aaaaatatat agatataatc atgtggctgt ctataccaac catattaata actaaacaga
     1141 ctaatgagaa agaagatttg aaataaaagt tttcaacata tcgataaaat tattattttt
     1201 ttattaagat actattttaa atcttatcta ttttaagaaa tcaaaaatac agatataaaa
     1261 aatatgaaaa aaaagtaatt tattgatctt tttcatttta tctacaagtg tttgttttga
     1321 ttagtgtaat ggaacactac ctagattagt tactcccaca taaggaacaa caaatatcgt
     1381 tataagatgt gcagaagcag gttctctaat attttcttgt ataccaaaga aggatcttat
     1441 atccagaaat cccattgtaa cagtacgtgg atacgtccaa tctccaccta caatacttcc
     1501 tgttccaaac tgaatatctt ttagcaactg aaatggtctt actgaactaa taggatcttt
     1561 actattctga tcacctccaa ttaaaccgct tgacccacct agaagattat ttaaaggatt
     1621 atcattgatc attcctggaa tgttaattcc agctttatct ccaaggagtc ctgaatcttt
     1681 gactagagat aaaagatctt caaggtcgct tacaggtatt ctaactgctg ttacagttat
     1741 cggtgtagtc atattagtgg tattacctgg actttgtatt tgtttcacag ttacagatat
     1801 ctgagtatct ccaaaattta ctccactaac ttgaagtcca gggattaagc ttatcgctgt
     1861 aattgatgta aaaggagtag caagaatagt ctttaattta gaaagatcca tcttttcaac
     1921 tccactagtt gcattctcta tatttttcat aggaattgtt gtagaattgg aaacagtagt
     1981 aatatttccc gttccttctc ctattggttg agcatataca gatgattgcc atattgtggt
     2041 tgttgatgct aacatagaaa tcaataataa agtacctgga acgaaaatta caaattttag
     2101 agaattcata ttatgaacat tgaagatttg tctattaaat aagtaaatcg tttatttcat
     2161 cataatattt gaaagcttta tcatcaatat gattaaaaat aatcaaacaa aaaatatcta
     2221 gtcatatggt tataataact catttaaaaa aataccaaaa aaaacaggaa attcgaaatc
     2281 gagttatatt aggtaattta ttcctaaatg aagagttaaa taaatacccc aaaatattca
     2341 tagtagtata cacatttctc taccaagttt atcattattt ataaagtata gataaaatat
     2401 gtatctttaa ttaaatattc aatctatata ggataaactt aagtaagata atagatatct
     2461 cgtgataatg attattttat atagaaatag tcacaagtat tcatttacct tgatggcact
     2521 tttaattgct gtcatgatag gtggatctgt tttaaatgct aatgctcaaa atccagaaaa
     2581 caaaccaaat tttcttgtaa tagtaggtga tgattttggt tattctgata taggtgcatt
     2641 tggaagtgag a
//
LOCUS       DATIAS010000708         4809 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1353087, whole genome shotgun sequence.
ACCESSION   DATIAS010000708 DATIAS010000000
VERSION     DATIAS010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4809
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1353087"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..853
                     /locus_tag="VLA74_14245"
     CDS             365..853
                     /locus_tag="VLA74_14245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51918.1"
                     /translation="MTNSNEKDENRKAGNEPGQSTASQRSELFESIRDNTMKIMNEFA
                     KTQPAYIQSISNLQMECIESTKGVVNTYTAIQKQLSDCYNINPAPVVTKQFVKQGNEF
                     TNNVIEFNNINNRLFANLLNITSDSIKNYTKTLDTFVKFNTNIFEQWLSVFKNAQGFN
                     RP"
     gene            1016..1408
                     /locus_tag="VLA74_14250"
     CDS             1016..1408
                     /locus_tag="VLA74_14250"
                     /inference="COORDINATES: protein motif:HMM:NF042555.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HSF51919.1"
                     /translation="MVPYEFIYSFTKTMMGIDNSIRWVCVTDKQGTLINERYREGIKL
                     LMTEEENEEYASNAISRQRTRMKFEPKIGKLIYALGKYENVIRATIPINEDYYLLLTI
                     DREARDIDRIFMTKVIPMISELRNKFTP"
     gene            1600..1728
                     /locus_tag="VLA74_14255"
     CDS             1600..1728
                     /locus_tag="VLA74_14255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51920.1"
                     /translation="MNYDYEGGTLRCKICAMEFFTKKEAEEHYKNSHADKETAVGE"
     gene            1919..2491
                     /locus_tag="VLA74_14260"
     CDS             1919..2491
                     /locus_tag="VLA74_14260"
                     /inference="COORDINATES: protein motif:HMM:NF021246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(R)-hydroxyalkanoic acid synthase subunit
                     PhaE"
                     /protein_id="HSF51921.1"
                     /translation="MASDQEFNKKYEELINSYNAIWQDFLKLPVGGQSNQFIRTFEED
                     KKKFQDLFSLCSKFQSNLLNYWMQLNQTYVKSIAELQSKKPELPDFQSEEEVKKYKNL
                     TIDVFEKYFTQLFQSKEFSVATSELLSNYSSFTHVLGNAFDNYFKLLNLPNRDEIDMI
                     LKDMQELKREIYKLRKNLDLIMSEEKLVVK"
     gene            2478..3632
                     /gene="phaC"
                     /locus_tag="VLA74_14265"
     CDS             2478..3632
                     /gene="phaC"
                     /locus_tag="VLA74_14265"
                     /inference="COORDINATES: protein motif:HMM:TIGR01836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III poly(R)-hydroxyalkanoic acid synthase
                     subunit PhaC"
                     /protein_id="HSF51922.1"
                     /translation="MSLNKVTTSKEPEIKVKELSSPNQRIDDTSSRVPGTLDDVEPKN
                     DVVTKMKKIIEAYQKSMSLEVGSTPHEVVKETRLYRLLHYKTTFHVPIRPPVLIVYAL
                     INRSYILDLQQDKSWIGNLVKQGFDVYLIDWKAPSLNDKYVSFDDYVNVFIDDCIDFI
                     RNKSSAEKITLHGYCMGATMSAMYCSLHQHKIKNLVTLAPVIDTSKDNTVISNFAKHL
                     DVENIIDSMGNMPPELLQTCFSALKPFKQGVNKYFSLYEHINDKRFIENFLRIERWLS
                     DIPPIAGEAFKQWIKNIYQENLLVKNEMKLGSDLVNLSRINVPFLNIVANEDHLVSPE
                     GSAELNNLVSSKDNRIMRFPTGHVGLIASSYSQMNVLPKTGRWFFLRSDV"
     gene            complement(3726..4043)
                     /locus_tag="VLA74_14270"
     CDS             complement(3726..4043)
                     /locus_tag="VLA74_14270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51923.1"
                     /translation="MPEIINNTTLGIPKKVIVPNTMTPHIIRTTPIILLFLKYRITNR
                     AEKFIAIKITTCIIVPPKNSPSIGIPIKEFIKIYVTSIRIETNNPSIVFINVNFLYKC
                     NLF"
     gene            complement(4285..>4809)
                     /locus_tag="VLA74_14275"
     CDS             complement(4285..>4809)
                     /locus_tag="VLA74_14275"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51924.1"
                     /translation="IPFSQEKPEIDVSIDGTGSDDKIKGGEGDDDINGRLGNDMLFGG
                     RGDDELDGDEGDDVVKGEQGNDEIEGGDGNDKLDGERGMDLITGNEGDDRLNGGRGDD
                     QIDGGDGNDRIDGGEGVDILIGGLGSDTFICDQFDTIFDYKSDQGDKKVGSCSIVDNS
                     PVSDSPQISQDIIG"
BASE COUNT         1771 a          715 c          727 g         1596 t
ORIGIN      
        1 cggtgtctat atatctaatt gaataatcat caactttcat tgtcgcaata tcgcgttcaa
       61 tcaaattaca caactgatat cagaacctcc aatattttat ccatttgaat aaaatattag
      121 taaatatcaa aatttttcta caccttaatt aattttggca aattgttgtc ttggtttttc
      181 aaatatttga tataatctta taataagcga ctgattaaaa ttattaaaat gtctataaca
      241 tgtaatattt tcaaactaat taacaaaaat ttgataagta aaaataaaca tttagcttga
      301 ttttttctta tcgatttact aaaggtatat atattttgtt attagttaat aatattgaac
      361 tattatgact aattcgaatg aaaaagatga aaatcgcaaa gccgggaatg aaccaggtca
      421 gtctacagca agtcagagat ctgaactatt tgagtcgata agagataata caatgaagat
      481 catgaatgaa tttgctaaaa ctcaacctgc gtacatacaa tcaatctcca accttcaaat
      541 ggagtgcata gaatctacta aaggagtagt aaatacttat actgccattc aaaaacaatt
      601 atccgattgt tacaatataa atcctgcacc tgtggttaca aaacaattcg taaaacaggg
      661 caatgaattt acaaataacg ttatagaatt taataatatt aacaacagat tatttgcaaa
      721 tttattgaat attacaagtg atagtatcaa aaactacacc aagacattag atacatttgt
      781 aaaattcaat actaatattt ttgaacaatg gctttcggtc tttaaaaatg cgcaaggatt
      841 taatagacca taatcttttt ttaaaagctt tataaaaaat aactcagaaa ttttttaaaa
      901 acattatgag ttttgatttg atcttttatt atattaaact ttcttaaatg cctcatatgg
      961 tttggataac acagtaagac ttttttattt ggttaaagat tgttgaataa taataatggt
     1021 accttatgaa ttcatttatt catttacaaa gactatgatg gggatagata attctatcag
     1081 atgggtttgc gtgacagata aacaaggcac attaattaat gagagatatc gtgaaggaat
     1141 aaagctccta atgactgagg aagaaaatga agaatatgct tccaatgcga tttcaagaca
     1201 acgtacaagg atgaaattcg aaccaaaaat aggaaaatta atttatgctt taggaaaata
     1261 cgaaaatgtc attcgagcta cgattccaat aaatgaagac tactatttgt tattaacaat
     1321 tgatagggaa gcaagggata ttgataggat attcatgaca aaggttattc caatgatatc
     1381 tgagctaagg aataaattta ctccatgatg caattgataa catcatattt tcatatttag
     1441 tagatattgt aattgaaaca aagatgtaaa atttatcttg tcagaaatag gctgtagcga
     1501 ataagaaaat tcagggttag gattttcaca tatataacat tcattttctg ccatttaaat
     1561 actaataaat aaataatctt cttctccata ttagaaataa tgaattatga ttatgaagga
     1621 ggaacattac gctgcaagat atgtgcaatg gaattcttta caaagaagga ggctgaggaa
     1681 cattataaaa attctcatgc tgataaagaa actgctgtgg gggagtaaga aaaaaatcat
     1741 aatttatcat tctaacaaaa tacatctttg cctgtctgct ataataatag gctatcttat
     1801 tctgtaaact acatagaaaa aatataaatt aacaataaaa aaacatcata aagactaaat
     1861 ttaaataata aaagatatat aattttttgt acaaacgtaa tcaactggta atatgcaaat
     1921 ggcttctgat caagaattta ataaaaagta tgaggaattg ataaatagtt acaatgctat
     1981 ttggcaagat tttttaaaat tacctgtagg tggtcaaagt aatcaattta ttcgaacatt
     2041 tgaagaagat aaaaaaaagt ttcaggattt attctcactt tgttctaaat ttcagtccaa
     2101 tcttcttaat tattggatgc aattaaatca aacatatgtg aaatctatcg cggaattgca
     2161 atctaaaaaa cctgaattac ctgatttcca gtcagaagaa gaggttaaaa agtataaaaa
     2221 tttgacaata gacgtgtttg agaaatattt tacacagcta tttcaatcta aggaattttc
     2281 tgttgctact tccgagctgc tttctaatta ttcttccttc acacatgtat tgggaaatgc
     2341 atttgataat tattttaaat tattaaattt gcctaacagg gatgagatag acatgatctt
     2401 aaaggatatg caggaattaa aaagagagat atacaaattg cggaaaaatt tagatttaat
     2461 aatgagtgaa gagaaacttg tcgttaaata aagttaccac ttctaaagaa cctgaaatta
     2521 aggttaagga attatcatct cctaatcaaa ggattgatga tacttcttca cgggtccccg
     2581 gcactttaga tgatgttgaa ccaaagaacg atgtagtaac aaaaatgaaa aagataatag
     2641 aagcgtatca aaaatccatg tccctagaag ttggttcaac tcctcatgaa gtcgtgaaag
     2701 agactaggtt atatagattg ttacattata aaaccacatt tcatgtacct ataaggcctc
     2761 cggtgctgat tgtctacgcc ctaataaaca gatcttatat acttgacttg caacaggaca
     2821 aaagttggat aggaaatttg gtaaaacagg gattcgatgt atatcttata gattggaaag
     2881 ctccttcttt aaatgacaaa tatgtttcat tcgatgacta tgtaaatgtt tttattgacg
     2941 attgtataga ctttattcga aataagagct ccgcggaaaa aataacgcta catggatatt
     3001 gtatgggtgc aacgatgtct gccatgtatt gttctttaca tcaacacaaa atcaagaatc
     3061 tggtaaccct tgctccagtt atagatacta gcaaagacaa tactgtgatc agtaatttcg
     3121 cgaaacattt ggacgttgaa aatataatag attctatggg taatatgcca ccggaattac
     3181 ttcaaacatg tttttctgca ttaaaacctt ttaaacaggg cgtaaacaag tatttttcgc
     3241 tttatgaaca tattaacgac aaaagattta ttgagaactt cctgagaatt gagagatggt
     3301 tatctgatat ccctccaata gctggagaag cttttaaaca atggattaaa aatatatatc
     3361 aagaaaatct gctagtaaaa aatgaaatga aattgggtag cgacctcgta aatttatcca
     3421 gaatcaatgt tccttttctt aatatcgttg caaatgagga tcatctagta tctcctgagg
     3481 gcagtgcaga attaaataat ctcgtatcta gtaaggataa caggataatg aggtttccta
     3541 ctggtcacgt tggtttaatt gcaagtagtt attcacaaat gaatgtattg ccaaaaaccg
     3601 gaagatggtt tttcttgcgt tctgatgtgt agtaatagat tgtatatttg gaataattca
     3661 gaataaagcg ttatgattag ttcattaaaa caataaatat gacttatatg aattaattgt
     3721 tattactaaa atagattgca tttatataaa aaattaacat taataaatac aatactcggg
     3781 ttattcgttt ctatccttat actagttaca tatattttta taaattcttt tatcggtatc
     3841 ccgatactag gactattttt aggaggaact ataatgcagg ttgttatctt gattgcaata
     3901 aatttttctg ctctgttcgt aattctatat tttaggaata acagaatgat tggcgtagtt
     3961 ctgataatat gtggagtcat tgtatttggg acaataactt ttttaggaat acccagtgtt
     4021 gtgttattta ttatttctgg cattttggca ttaaggcaaa agagattaca tacataaaaa
     4081 attatcaaaa ctttgatcac ctctaaaaat ggaaaggaaa aatttttaat tagaaaggat
     4141 agatataaaa taaaatataa ttatattttg ttatgaaata caaaaagcag tgtttagaat
     4201 taagatgatt gagatggaaa gaaataaaaa taaataaaaa aataagaaat gaaaacaaga
     4261 aataaaaata aatcgatata gtttttatcc aattatatct tgtgagattt gaggcgaatc
     4321 tgatacagga ctattgtcta caattgaaca tgatcctacc tttttgtcac cttgatcgga
     4381 tttatagtca aatatagtat caaactgatc acatataaaa gtgtctgaac ctaatcctcc
     4441 aattaatata tcaacgcctt cgcctccatc aattcgatcg tttccgtctc ctccatcaat
     4501 ttgatcatca cctcgtccgc cgtttaatct atcatctcct tcgttgccag ttattaaatc
     4561 catacccctc tcaccatcca atttatcatt cccatctcct ccctcaattt catcattacc
     4621 ttgttctccc ttcacgacgt catctccttc atccccatct aattcgtcat cacctcgtcc
     4681 gccgaataac atatcatttc ccaatcttcc atttatgtcg tcatctcctt cacctccctt
     4741 gattttatca tcactacccg ttccgtcaat tgaaacatct atctctggct tttcttgact
     4801 aaatggaat
//
LOCUS       DATIAS010000709         3054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1489905, whole genome shotgun sequence.
ACCESSION   DATIAS010000709 DATIAS010000000
VERSION     DATIAS010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489905"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..231
                     /locus_tag="VLA74_14280"
     CDS             31..231
                     /locus_tag="VLA74_14280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51925.1"
                     /translation="MDCINIFGVDKSNFAASFYNVSSLDDEDIEDLAQYVGTLFITDQ
                     NSYLTTTGYLEQLFEVLDGLPG"
     gene            complement(452..1375)
                     /locus_tag="VLA74_14285"
     CDS             complement(452..1375)
                     /locus_tag="VLA74_14285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51926.1"
                     /translation="MKKTYLDELMSNGLIDYDKSNIDAKQYIYYPIVELFASTVTSAI
                     VGGNEEQEKSLSLLSNSDQFDKVSQHSSTIYEKIIKNVTEIWLFSEYMRLLHYRIDTN
                     SIQGPLADFLNNHDEFKIIDKNNNDSYQNIGNKFLEETDYSNSHKDIEEDPSTDKNQC
                     CCDELDYRKNDSSGSIGRLTIRQFIKQYTDISSFGFDNKCGSNIASFGKISPIKSNLA
                     KFDNKDIITKNIQDEKISNTITQSQDSSSLIACHYCDYCHNDEKEVERHSVNAHPGLP
                     ARPDPSLLGLLQQEKDTKKKEEAGNDDKVTE"
     gene            2121..2228
                     /locus_tag="VLA74_14290"
                     /pseudo
     CDS             2121..2228
                     /locus_tag="VLA74_14290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263577167.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thrombospondin type 3 repeat-containing protein"
     gene            2296..2469
                     /locus_tag="VLA74_14295"
     CDS             2296..2469
                     /locus_tag="VLA74_14295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51927.1"
                     /translation="MAKDFTICVETDDPSTGTTPATPPCAPGSGSGFTYIVKPGLINL
                     YEPGHIHIYINKD"
     gene            complement(2575..2742)
                     /locus_tag="VLA74_14300"
     CDS             complement(2575..2742)
                     /locus_tag="VLA74_14300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51928.1"
                     /translation="MQKCDLLSGRKLDFNTRFIVNAALATAYKKQIPPMSITTLKTNY
                     KNLYLLLEQQK"
BASE COUNT          980 a          472 c          437 g         1165 t
ORIGIN      
        1 atatgaaaat gctggtttat cggatcttag ttggattgca tcaacatatt cggagtagac
       61 aaaagtaatt ttgctgcatc attttataat gtttctagtt tagatgatga ggatattgaa
      121 gatttagcgc aatatgttgg aactttattc atcacagatc aaaactcata tcttactaca
      181 accggatatc tagaacaatt gtttgaagtg ttggatggat tacccggctg ataaatatta
      241 ttattaatat taatattatt ttattttttc ttactctttc gtttgttttt ctatagtcat
      301 tttgtctatt ttctcatctc catttactta tccgtaaaat tttatgaaaa catgcaaaaa
      361 ttacgaaaca ttttatttta atgctaatat tacgtatatg gttcatgaaa taaaatgttt
      421 ttcttgtctt tcactttgct tgatttgaaa gtcattctgt caccttatcg tcattgcccg
      481 cctcttcctt cttttttgta tccttctcct gttgtagtaa tcctagtaga cttggatcag
      541 gtctagccgg taagccagga tgcgcattaa ctgaatgtct ttcaacctct ttttcatcat
      601 tatggcaata atcacaataa tggcaagcaa ttaatgatga tgagtcctgt gattgagtta
      661 tagtattact tattttttcg tcttgtatat ttttagtaat gatatctttg ttatcgaatt
      721 tggctaaatt cgatttgatt gggcttattt tgccaaaaga agcaatattt gagccgcatt
      781 tgttatcgaa tccaaaagag gagatatcag tatactgttt aatgaattgt ctaatggtca
      841 atcgaccaat actaccgcta ctatcgttct tcctataatc caattcatca cagcaacatt
      901 gatttttatc tgtagaagga tcttcttcta tatctttgtg actattgctg taatcagttt
      961 cttctaaaaa tttgtttcca atattttgat aactatcatt attattttta tctattattt
     1021 taaattcgtc atggttattc aaaaaatctg ctaatggccc ttgtatactg ttcgtatcga
     1081 ttcgataatg cagtaacctc atgtattcag aaaataacca tatttcagta acatttttta
     1141 taattttttc ataaattgta gaagaatgtt gtgaaacctt atcgaattgg tctgaattcg
     1201 ataacaaaga taatgatttt tcttgttctt cgtttcctcc tactattgca gatgttactg
     1261 ttgatgcaaa gagttctaca attggataat atatgtactg cttagcatca atatttgact
     1321 tgtcatagtc tatcaagcca ttactcatca attcatcaag atatgtcttt ttcaaattat
     1381 cagtggttat tgatttactt ttaacttttt tgaaggcatc acagagttgt ctagcagtaa
     1441 ctgctactct atcctcttgc tttgaaccat attgatttta gtagaaggct aagagtggtt
     1501 tctttagtgc ttggaaaggc tttgattagt ataaattatt ttaatattta aaaatcaggg
     1561 aatcatatta attgcggcaa ttattattat ttttattatt attgtattat tcttactatt
     1621 attgttcatt aattcagcat tctattctta tattcataat tttgcaggca atattatcta
     1681 aaaatttatc ttttctataa ttatcctata attatcataa cctgaactac tataatttta
     1741 catcattatc cccttctatc aggtatgtta ttgatgagta agaattttgt gatcttatat
     1801 tcatcttgaa aaagttttta taataaaaga tttacaataa aaaggaaaaa taatataaag
     1861 atttcttata atgactaaat tctttaaata ttttaaaatc cataatattt acgatgtatt
     1921 ttcttcaaat gtctaatagt tttttaacta ttgtatttgc agccatttta ctaacaagtc
     1981 aattagttca atccaccttt aatcctgtgg aagcacaaaa tacaccagga acatctggaa
     2041 gtattccagg tcaaagtgaa gggacatcgg gacagactcc tggaactcct ccaccaggac
     2101 aaagtgaaac tacaccaaga caagatcaag accgtgatgg tgtatccaat accagagata
     2161 actgtcctac aagacctaat ccagaccaaa gagatactga tagagatggc gtaggcgatg
     2221 tatgcgactc ttcacccaca ggaggcccag caatggtaac agtcaccaaa ttttgtcgtc
     2281 aatggtggtc ctaatttggc aaaggatttc actatttgtg tagaaacaga tgacccatct
     2341 accggaacca cacctgctac acctccttgt gcacccggat caggatcagg tttcacttat
     2401 atagtaaaac cagggttaat taacctctat gagcctggac atattcatat atatataaat
     2461 aaagattaaa attaaaaata actgtagaat ttcgtattgt acttttttca ggtcatttat
     2521 tagtatgctt gtcaaatcaa gcatacacag acattaataa gtaagtactt attttcattt
     2581 ttgttgttca agtaataagt acaaattttt gtaatttgtt tttaacgttg taatactcat
     2641 aggtggtatc tgttttttgt atgctgtagc aagtgcagca tttacaataa accttgtatt
     2701 aaaatcaagt ttccttcctg ataacaaatc acatttttgc aaccattcgt taattatatg
     2761 ataaaaatcc tcaaacgata gttttttgat aactaaaata acctaaaaag attttgttat
     2821 tattcatatt gtaaaagttt tttcatctat actgattgtt tctgtagtag aagtattatc
     2881 aatattgaca attatgttga gaaaaaatcc aattatggaa ttatattata agcataaatg
     2941 gatcattatg cttatttaca atattttatt ataaaaagaa aaaaataaat gataattgta
     3001 ttagatcaat caatatgtta gaggtaaaat caatctttat tctgatataa ctaa
//
LOCUS       DATIAS010000710         2485 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1625005, whole genome shotgun sequence.
ACCESSION   DATIAS010000710 DATIAS010000000
VERSION     DATIAS010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1625005"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            342..659
                     /locus_tag="VLA74_14305"
     CDS             342..659
                     /locus_tag="VLA74_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51929.1"
                     /translation="MNKWVEDQVFGYLSGFKIKFIGLALITAGTVEPLLFSGGFPLIG
                     LLVTIFGFVIMYIGHRSRPTKEKKMLKMQVQEYFREQKLNKEMEKRQIEEMEKAEKER
                     EKE"
     gene            complement(805..1578)
                     /locus_tag="VLA74_14310"
     CDS             complement(805..1578)
                     /locus_tag="VLA74_14310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51930.1"
                     /translation="MFLSVSQLSFAQKDDDNDKLVVRANINLQNVDLEKAKFIRVIGF
                     INGQEVKEDIPISSIDKNKKTLSIDLKTDVKNEIVTADTPDEFFVCAYQVGDVQQEYN
                     SITKFDCNEGDLQSVDKPTDAKLFSTGSLVYTHSKAVYDANLNKTTNDKSDTVKLEIL
                     VPLADRKDTQKLKIAVMIKGQIKSEVIEDVQAELDKSKGSTIKRIFTFDRDTDIGKIQ
                     IGDRYHACVSSDDFRPPEGTECEKRVVHQFDKVNSLPAR"
BASE COUNT          881 a          376 c          354 g          874 t
ORIGIN      
        1 aaattttgat gttcagttta gacctttctt taaggattaa acattatatt ccttaaaatc
       61 gcttctacta gtcatctata tatttgaaac ctttacctaa tacatcaagt tccaataatg
      121 aatcaaccat caaaaaatat ctcataactt tttcctttaa cttaaggatt gatttttttg
      181 aatgcttact tagtaaacat tttgagggta agaatggaca atcacgcagg gataccaaaa
      241 aatagagcaa gaagaggggt ttttgaaagt agacattagt ggatgaacag attcaagcga
      301 ttggtgatta gatgagaaaa gaatgaagat gcaattggtg agtgaataaa tgggtagagg
      361 atcaagtatt tggatatctt tctggtttca aaataaaatt catcggactc gcattaatta
      421 cagcaggaac ggttgagcct ttactttttt caggcggttt tcctttaatt ggtttactag
      481 tgacaatctt tggatttgtc attatgtata taggacatag gtcaagacct acaaaagaaa
      541 agaagatgtt gaagatgcag gttcaggaat attttagaga acagaagttg aataaggaga
      601 tggaaaagag gcagatagaa gagatggaaa aagccgaaaa ggaaagggaa aaagaataga
      661 catgaagtga atggtatgga gttacaaaaa ttccatgagc ttgattagac aaaaataaaa
      721 agacaataaa caaatccaat aattacatac aataattcaa aaatattatc gaatccttat
      781 tagacatgta attttattat ttatctagcg tgctggcagg gaatttactt tatcaaattg
      841 gtggactact ctcttctcac actcagttcc ttctggtgga cgaaaatcat cacttgaaac
      901 acaggcatgg tatctatctc caatttgtat tttgcctatg tcagtatctc tgtcaaaagt
      961 aaatattctt tttattgtac ttcctttgct tttatcaagt tcagcttgaa catcctctat
     1021 aacttctgat tttatttgac cctttatcat cacagcaatt tttaactttt gtgtatcttt
     1081 tctatctgcc aaaggaacaa gaatttctag tttaactgta tcacttttgt catttgttgt
     1141 tttatttaga ttagcatcat aaactgcttt actgtgagtg tacactaggg aaccagtact
     1201 aaaaagctta gcgtctgtag gcttatctac actttgtaga tctccctcat tacaatcaaa
     1261 ttttgtaatg gaattatatt cttgttgtac atctccaact tgatatgcgc atacaaagaa
     1321 ttcatcgggt gtatctgctg tgactatctc atttttaaca tctgttttta aatcaatact
     1381 aagagttttc ttgttcttat ctatagaaga gattggaata tcttctttaa cttcttgacc
     1441 atttataaaa cctataactc gtatgaattt tgctttttcc aaatctacat tttgtaaatt
     1501 aatattagct ctaactacta gtttatcatt atcatcatct ttttgtgcaa aagataactg
     1561 gctaacggat aaaaacaata tgctactact aataaaggaa ctaataataa tacaagacag
     1621 aattatgatg tgattttttt ctagctccac aaattaaaga tttgaaagaa ctacttaaag
     1681 atttatataa atcatctagt ctctgtcttc tcattataca aattatcata gatattcact
     1741 attagtacga ttctgttgat atacttatct tgttcagaat aattattctc ataataataa
     1801 ttataataaa caaataacaa aatttttcat tgtatcaaaa aataaataaa gttgaaacaa
     1861 tttaatttat tatttaatgg ttatatataa aattgaaaat tacaataaac cataaaaaat
     1921 tgtttaaaaa tttggaaatt ctatttattt ttatgggcta ccgaaaatca ttccacgttc
     1981 acctggtgca aacacgttgg agcaaaacct tcttttgaat caaataatta ttatcaaact
     2041 gatgattcaa aatctcatca gtcattacaa agactaattc aacaaatagg atagttattg
     2101 atattcattg ttattttata ttatttttcc atttatcata aatatatagc tctaaccgtt
     2161 gttagcttaa cgtatgctaa cacagttaca tggatattta aataaaagtt tctacacagc
     2221 atagtaacga ataataatat attttatcct gcatttaaaa aacaatgttt ctgtatagca
     2281 gccataactg ttattattcc attacttcta ttctcttcta tagaatttag tggttccaat
     2341 aataaattgt cattagtaaa atatgctcta gcacaacaag agagtaacaa tgttggtaat
     2401 actatcccaa atattcagaa tcaatcatct tctcctgcaa ctgcaactgc aattaaaaca
     2461 acaacgaatg ctactactgc tagta
//
LOCUS       DATIAS010000711         3323 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_808892, whole genome shotgun sequence.
ACCESSION   DATIAS010000711 DATIAS010000000
VERSION     DATIAS010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808892"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..402)
                     /locus_tag="VLA74_14315"
     CDS             complement(85..402)
                     /locus_tag="VLA74_14315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51931.1"
                     /translation="MILVLVLIAGLPSALSYSQINLSLNNIPILDIVDSAFGTYGIAI
                     SAAIFSVIVTWFIDKKKLIEQANLYSDSNIKIKIPENIIHLVKFGLPILITLTIIVGI
                     VTK"
     gene            complement(399..1298)
                     /locus_tag="VLA74_14320"
     CDS             complement(399..1298)
                     /locus_tag="VLA74_14320"
                     /inference="COORDINATES: protein motif:HMM:NF037979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HSF51932.1"
                     /translation="MENGGGAFFLTYIIVLFTFGLSFMMLEFVVGRYYKTSVVESMKR
                     IQKRFRYVGILIVGITFSILSYYLVILGWVLSFFFLMIFGINLSFNDYTNSLFPILSF
                     LGISIINFIIIKTDIRKGLERISKIAVILLIGIIIPLTLLGISMPGAVKGIEFFLTPD
                     FAKSVAPEVWSVAFGQAFFSLSIGMGVLLTYGSYLQDIKKPLLESSIIIILADLSIAI
                     IAGIMIFSWVFSHNLDPAQGIPLIFQVMPSRFFELEFLGIVVGSLFFFLLLLAGITSS
                     LSMFQVPISAIQDTFNYSKKKAS"
     gene            complement(1303..1470)
                     /locus_tag="VLA74_14325"
                     /pseudo
     CDS             complement(1303..1470)
                     /locus_tag="VLA74_14325"
                     /inference="COORDINATES: protein motif:HMM:NF012435.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1543..1746
                     /locus_tag="VLA74_14330"
     CDS             1543..1746
                     /locus_tag="VLA74_14330"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSF51933.1"
                     /translation="MDDNISLNSKVIIGNPADEIIKFADDEKVDLIIMGTTGLAGVSK
                     FKAIGSVARSVSEKAKCPIMLVR"
     gene            1924..2361
                     /locus_tag="VLA74_14335"
     CDS             1924..2361
                     /locus_tag="VLA74_14335"
                     /inference="COORDINATES: protein motif:HMM:NF016178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HSF51934.1"
                     /translation="MKCLSLKQPFADLLSIREKTVELRKWNTKFRGKFLIHASKNIDI
                     EACKRLDINIDKLTKGAIIGFAFLYDVKEYKNQEEFNKDKQKHFSIISKYFDGYKYGF
                     LVKDARMLKISIPYLGKLGFFNVDDSIISYDPLMLDYNKEKIL"
     gene            2648..>3323
                     /locus_tag="VLA74_14340"
     CDS             2648..>3323
                     /locus_tag="VLA74_14340"
                     /inference="COORDINATES: protein motif:HMM:NF018827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51935.1"
                     /translation="MSDSAFLTHFNSISPYFDFTIKSFNFQTQYGSSLLHSWSRAIQQ
                     SIISDFQEENGKKFQDKFRYTFDSELKNMLKKTEFCKSLSDFMDSYNELAPILNHDKS
                     YRYFESIMNNLDSIIEPFRDIVNRTPSEVIPMDGRFEVHHYKRSSQQKLKTPILVVGS
                     LINRHYILDLLPQTSIIRYFQQLGFDVYATDWRIPTVKDENMTLESYAHEYLENAVDK
                     VEEITGS"
BASE COUNT         1268 a          486 c          510 g         1059 t
ORIGIN      
        1 cctagatacc attgtatatt aatacaaatt gtaacaagat atcaattata agattgaagg
       61 ttgcttatcg ataattttta tatattattt tgtgactatt cctacaataa ttgtcaatgt
      121 gattagaata ggaagaccaa atttaactaa atgaataata ttctctggaa tcttgatttt
      181 gatgttgctg tcgctgtata gatttgcttg ttcaatcaat tttttcttgt ctataaacca
      241 tgttactata acagaaaata ttgcagcaga aatagctatt ccatatgttc caaaggctga
      301 atcaactata tctaaaatag gaatattatt tagcgataga ttaatttgac tatagcttag
      361 agcagatgga agtcctgcaa ttagtactag aacaagaatc aagatgcttt ctttttagaa
      421 taattaaaag tgtcctgaat ggcagaaata ggtacttgaa acattgatag tgaagaggta
      481 attccagcca aaagtaatag aaagaagaac aaagaaccta ctactattcc caagaactcc
      541 aattcaaaga atctagaagg cattacttga aaaattaaag gtattccttg tgcaggatcc
      601 aaattatggg aaaagaccca agaaaagatc atgattcctg ctattatagc tatagataaa
      661 tctgctaaaa ttattattat ggaagattca agtaatggtt ttttaatatc ttgtaaatag
      721 ctaccatacg ttagtagtac tcccattcct atggataaag aaaagaaggc ttgaccaaaa
      781 gcaactgacc atacttctgg tgctacagat ttagcaaaat caggagtgag aaaaaattca
      841 attcccttta ctgctcctgg catagatatt cctaacaatg tcagtggaat gattattcca
      901 attagtaata tgactgctat tttgcttatt ctttctaaac cttttcttat atctgtttta
      961 ataattataa aattgattat agagattcct aaaaaagata gtataggaaa taatgaatta
     1021 gtataatcat tgaaagacag atttattcca aatatcatca agaaaaaaaa tgagagaacc
     1081 catccaagta ttaccaaata ataactaagt atcgagaatg taattccaac tatgagaatt
     1141 ccaacgtatc tgaacctctt ttgtattctt ttcatacttt ccacaactga ggtcttgtag
     1201 tatcttccaa ctacaaactc tagcatcata aaggataaac caaaagtaaa aagtacaatt
     1261 atatacgtta aaaagaaagc accgcctcca ttttccaact atatatggaa atctccagat
     1321 attccctatt cctactgctg cgcctataga agcaaataca aatccagaat aggaattcca
     1381 tctttctcgt ttagtagtag cagcagaatc accaccaata gaagaaaaat cagaattatc
     1441 agaagcgtta ttagcactaa gagaatacat aaaagagtta tatgttgaaa taaaatcaaa
     1501 tgcaataaaa atgcttataa taaaatcaaa aaatatgaaa agatggatga taacatatct
     1561 ttaaactcca aagttataat tggaaatcct gctgatgaaa taataaaatt tgcagatgat
     1621 gaaaaagtag acctaattat tatgggaaca accgggctag caggagtttc aaagtttaag
     1681 gcaattggta gtgttgctag aagtgtctcg gaaaaagcaa aatgcccaat aatgttggtt
     1741 agatgatgtt gataatttta tcaacccata agaagaaaaa atcgatataa aaattccaga
     1801 aattgttatc catatatcag gtaataaaat tgaagaatat ggtaatacta gatttgtata
     1861 taaatatcta aaatgttctt acaaatagaa aagaagataa caaattgtat ttgataatgt
     1921 cctatgaaat gtttatctct taaacaacct ttcgcagact tgctatctat tagagaaaag
     1981 acagtagaat taagaaaatg gaataccaaa tttagaggta aatttcttat tcatgcttca
     2041 aagaatatag atatagaagc ttgtaaaaga ctagatatta atattgacaa acttacaaaa
     2101 ggtgcaataa ttggttttgc ttttttatat gatgttaaag agtataaaaa tcaagaagag
     2161 tttaacaagg ataaacaaaa acatttttct attattagta aatattttga tggatacaaa
     2221 tacggtttct tagttaaaga tgctagaatg cttaaaatat cgattcctta tttaggtaaa
     2281 ttaggattct ttaatgtgga tgattctatt ataagctatg atcctctaat gttggattat
     2341 aacaaagaaa aaatcttgtg aaaaaataac taaaagttac tacaataaca atttgtgtct
     2401 gacgtaaact ctgccattgt gctccagact tatcactttt tcatcataga ccattgtcca
     2461 aacctttttc gacatcggtc tgaagcatct tgataacttt gtctgagaag gtgaatgcca
     2521 ttcagatttt gacaattctt gcaattgact agttatggta actgtaatta aaatattaat
     2581 caaaaatcaa atctgaaatt gaggtatata tagagtaata ttatgtcaat tctcaaatat
     2641 aactaaattg tcagattcag cattcctaac gcattttaac tccatttctc cttatttcga
     2701 tttcacaata aagtcattta attttcaaac acagtatgga tcatctttac ttcactcatg
     2761 gtctagggct atccagcagt ctattatttc tgattttcaa gaagagaatg gtaagaaatt
     2821 tcaagataaa tttcgatata cttttgatag tgaattaaaa aatatgttaa agaaaacaga
     2881 attttgtaaa tcattatcag actttatgga ctcgtataat gaattggcac ctatattgaa
     2941 ccatgacaaa tcatacagat actttgagtc aattatgaat aatttagatt cgataataga
     3001 accatttcgc gacattgtta ataggacacc atctgaagta attccaatgg atgggcgatt
     3061 tgaggtccat cattacaaga gatcttcaca acaaaagtta aagactccaa tactggtggt
     3121 aggttcctta atcaacagac attatatttt ggatttgctc ccacagacaa gtataattag
     3181 atatttccaa caactgggct ttgatgtata tgctacagat tggagaattc ccacagttaa
     3241 ggatgaaaat atgacccttg aaagctatgc acacgagtat cttgaaaatg cagttgacaa
     3301 agtagaagag attacaggtt cta
//
LOCUS       DATIAS010000712         2005 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2036791, whole genome shotgun sequence.
ACCESSION   DATIAS010000712 DATIAS010000000
VERSION     DATIAS010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2036791"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..412)
                     /locus_tag="VLA74_14345"
     CDS             complement(<1..412)
                     /locus_tag="VLA74_14345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HSF51936.1"
                     /translation="MRNTTKTEIENYIHKINNYFISLLSGEPSELYEASSLYIKSGGK
                     RLRPIMVLKSCEMFGGSQEDALPAASAVEFIHNFSLVHDDIMDNDDLRHGIPTVHKNF
                     GLPIAILSGDILFSKAFQILSTNNNKSLKESSLLS"
     gene            complement(409..1494)
                     /gene="fni"
                     /locus_tag="VLA74_14350"
     CDS             complement(409..1494)
                     /gene="fni"
                     /locus_tag="VLA74_14350"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HSF51937.1"
                     /translation="MSESNNSEIDLIMRRKKDGIDIPLSNNVQSKFISNYLEYVKFVH
                     NALPEIDFDEIQTATEFLGYKFRAPIIIDSMTGGTPEALKINSRLSTLAETFGFGMGL
                     GSQRAGLKSESLAETYSVARKNAPSAFLIANIGGAQLAEGLDIKMIEKIISMIDANAL
                     VIHLNPLQELIQPEGEPRYRGVLEKISKITESISIPIIVKEVGAGISREVALVLEKAK
                     VDCINIAGSGGTSWAGIEKIRANKAKSDIKEHLGELFWDWGIPTALSLIEVRNSVGLP
                     LIASGGIRNGLEIAKCISLGANMCAMAYPFLKAASESKENLFKFSEQIINELKGTMFL
                     TGSSNILDLSKSRLILTGELADMVIKK"
     gene            complement(1506..>2005)
                     /locus_tag="VLA74_14355"
     CDS             complement(1506..>2005)
                     /locus_tag="VLA74_14355"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51938.1"
                     /translation="LNPYGLPPSSFLNNGKPYSNKIRELKKMTEHNIIPITYGDIVYI
                     KNNKYSILSGDVLMTMLSKILQPSKIIFALNVDGLYNNIIDKKIIKEINFEYKKKKRG
                     VINFERDLTIKDVTGGIKRKVEEATEIARTGKDVIFLNGLNPIQIEKAVNDKQFKGTI
                     FKGKI"
BASE COUNT          621 a          364 c          263 g          757 t
ORIGIN      
        1 tgctcaacaa agaactttct ttaagtgact tgttgttatt agtagataaa atttggaaag
       61 cttttgagaa aagaatatct cctgataaaa ttgcaatagg caatccgaaa tttttgtgta
      121 cagtgggaat tccatgtcta agatcatcat tatccattat atcatcatgt accaatgaaa
      181 aattatggat aaactcaact gctgaggccg ctggtaatgc gtcttcttga ctacctccaa
      241 acatttcaca agattttaaa accattattg gtctgagacg ttttccacca ctttttatat
      301 aaagagagga tgcttcgtat aattctgaag gttctcctga aagtaaagaa ataaaataat
      361 tattgatttt gtgaatataa ttctcaattt ctgttttagt agtattcctc attttttaat
      421 aaccatgtct gctaattctc cagttaatat aagtcttgat ttggataaat ctaaaatatt
      481 tgacgaacct gttagaaaca ttgttccctt taattcatta attatttgtt cagaaaattt
      541 aaaaagattt tctttggatt ctgaagcagc tttaagaaat ggatatgcca ttgcacacat
      601 atttgctcct agtgatatgc attttgctat ttcaagccca tttcgaatcc caccggacgc
      661 aattaatggt agtcctacag aattacgaac ctctattaaa cttaaagcag tgggaattcc
      721 ccaatcccaa aataactctc caagatgttc tttaatgtcg ctttttgctt tgttagctct
      781 tattttttct attccagccc agcttgtgcc tccagatccg gctatattaa tacaatcgac
      841 ctttgctttt tcaagtacca aagcaacttc tctcgaaata cctgcaccaa cttctttaac
      901 tattatcgga atgcttatgc tttctgtaat ttttgatatc ttttctaaaa cacctctata
      961 tcttggttct ccttctggct gtatcaattc ttgcaatgga ttaagatgaa tgaccaaagc
     1021 attagcatca atcatagaaa ttattttttc aatcatctta atatccaatc cttctgctag
     1081 ctgtgcaccc ccaatattgg cgattaaaaa agctgaaggt gcattctttc tagcaacaga
     1141 ataagtttct gctagcgatt cactttttaa tcctgctctt tggcttccta aacccattcc
     1201 aaatccaaat gtttcagcta atgtactcag ccgagaatta atttttaaag cctctggagt
     1261 tcctcccgtc atagaatcta ttataatagg tgccctaaac ttgtagccta aaaattcagt
     1321 agcagtttga atttcatcaa aatctatctc aggcaatgca ttatgtacaa atttaacata
     1381 ttctaaataa tttgaaataa atttagattg aacattattt gaaagaggga tatcaatacc
     1441 atctttcttt ctacgcatta tcaagtcaat ttcagaattg tttgactcag acatttgata
     1501 tagatttata tttttccctt aaaaattgta cccttaaatt gtttatcatt tacagccttt
     1561 tcaatttgaa taggatttaa tccatttaaa aaaataacat ccttaccagt tctagcaatt
     1621 tcagtggcct cctctacttt tcttttgatt cctcctgtta catctttgat cgttaaatct
     1681 ctttcgaaat taattactcc tcgtttcttt tttttatatt caaaattaat ttcttttata
     1741 atttttttat ctattatatt attataaaga ccatctacat taagggcaaa aataattttt
     1801 gacggttgta aaatttttga caacattgtc attaatacat ccccagacaa tatcgaatat
     1861 ttgttattct ttatataaac aatatcgcca tatgtaatag gaataatatt atgttctgtc
     1921 atttttttta attcccttat tttgttacta tatggtttac cattgtttaa aaatgatgaa
     1981 ggaggtagtc catatggatt gagtc
//
LOCUS       DATIAS010000713         3624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1220076, whole genome shotgun sequence.
ACCESSION   DATIAS010000713 DATIAS010000000
VERSION     DATIAS010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220076"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..411
                     /locus_tag="VLA74_14360"
     CDS             109..411
                     /locus_tag="VLA74_14360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51939.1"
                     /translation="MSKKIPILNTKKSRKRMEELDKKRQKEIQDLKKEEQIKKQKEIP
                     QKNRIQDIKYRIILLIVVVIAFFILLYILGQIVTSSDTLHSHVLGYEIKRNIFEYL"
     gene            complement(457..1251)
                     /locus_tag="VLA74_14365"
     CDS             complement(457..1251)
                     /locus_tag="VLA74_14365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51940.1"
                     /translation="MLNVEGWKKWFLYQLIGEGVHNALYHDQILKEIGKHYDINLDRA
                     LRDLIDDGIIMLIESRQKRKYIVNFERLGDAQKIINVHDKNRIARDEKINYDHNNVNY
                     INLEHNKKYVQPYLSEPSGYAYWFDNEENRQFKKQSVYRIYFKETDRMNFAAQLITKS
                     LGGSKIIYMGSLNDPNSYISRLWRAVISLSNENKDGMFILQNIQDKDRIACGNNRQRG
                     KIALSIFKQLGFIQEADFKGNSTRFKVSGKKPYSITLDEIFNISTK"
     gene            1360..1704
                     /locus_tag="VLA74_14370"
     CDS             1360..1704
                     /locus_tag="VLA74_14370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51941.1"
                     /translation="MNQSHSYKRKRPIENLFKNDIARVLDLFIFNSEFSYSTKELSDL
                     TEIPYQNIQRILITLVKKKIILAKKSGNMKSFSINNNSELSRALIRFVHQSVNMEIDQ
                     FIKNSPEMIIKR"
     gene            2104..2280
                     /locus_tag="VLA74_14375"
     CDS             2104..2280
                     /locus_tag="VLA74_14375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HSF51942.1"
                     /translation="MPFIAVSMYPGRSEDQKKEFAKEVTDLAVKILKTKAEHVIVVFD
                     ENPKENWYLSGKNL"
     gene            complement(2339..3310)
                     /locus_tag="VLA74_14380"
     CDS             complement(2339..3310)
                     /locus_tag="VLA74_14380"
                     /inference="COORDINATES: protein motif:HMM:NF012600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TFIIB-type zinc ribbon-containing protein"
                     /protein_id="HSF51943.1"
                     /translation="MEYKKQDESTKPNPNNPAYCENCHKDAIIFDNSANEFVCSSCGY
                     VLNNDSLNNETIQGYIMQSDFNDRFRTGMPESLAVHHRGLSTLIGMGDTDARGKVLQP
                     KQRMEIQRLRTWNSRSQLNDSVSRNLEKALKYLNNFGDKLCLNQAVIESAAYIYRKAA
                     VKKLAKGRSTIGLVGASLYAACREASTPKTILDVSEICNITSKELMSHYKLILNELDL
                     NIPATKGPDYVTIISNRLKLSEKTKREALQIFGHVEQRGISIGKNPRAIAGAVIYLAS
                     QICDEFIRQVEICQVADISTVSLRKRCKEIKALPGLEHIEKIQQTQQ"
BASE COUNT         1207 a          584 c          487 g         1346 t
ORIGIN      
        1 taattgaaga atttaaagat tattcaaaag cacttgaact ttttaactca aaatcttctg
       61 aggacgtaat tctatacgaa gttcaaagaa ctttgtccga aggttctatt gtcaaaaaaa
      121 atacctatcc ttaacaccaa aaagtctcgt aaaagaatgg aggagttgga taaaaaaaga
      181 caaaaagaaa ttcaagatct taaaaaagag gaacagatta aaaaacaaaa agaaatccca
      241 caaaaaaata gaattcagga cataaaatat agaataatac ttttgatagt tgttgttatt
      301 gcatttttta tcttacttta tattcttggt caaatagtta catcctccga tacacttcat
      361 tctcacgtat taggatatga aatcaaaaga aatatctttg aatatttgta ataggttaat
      421 tattacaaaa ttattctgta tttttttctt tgtcttttat tttgtagata tattaaatat
      481 ttcatcaagt gtgatcgagt acggtttttt accgcttact ttgaacctag ttgagtttcc
      541 cttgaaatca gcctcttgaa taaatcccaa ttgcttaaaa atcgataaag ctatttttcc
      601 cctttgtcta ttattaccac aagcaattct atctttatct tgaatatttt gaagaataaa
      661 cattccatct ttattttcat tcgataatga aataacagcc ctccatagtc gagaaatata
      721 agaattagga tcgtttagtg atcccatgta aataattttt gaaccaccaa gagattttgt
      781 aattagctga gcagcaaaat tcatcctgtc tgtctctttg aaatagattc tatacacgct
      841 ttgttttttg aattgcctat tttcttcatt gtcaaaccaa taagcatatc cagacggttc
      901 tgacaaatat ggttgaacgt attttttgtt atgttctaaa ttaatataat taacattgtt
      961 gtggtcataa ttgatttttt catctcgagc tattctattt ttatcatgga cgttaataat
     1021 cttctgcgca tcacctaatc tttcgaaatt aactatgtat tttctcttct gcctagattc
     1081 gatcaacata ataattccat cgtctatcaa atctctcaat gccctatcta ggttaatatc
     1141 gtaatgcttc ccgatttctt tcaagatttg gtcatggtac agagcattat gtaccccttc
     1201 tccaattaat tgatagagga accacttctt ccagccctcc acattcaaca ttatataaaa
     1261 gctatttttt ttcgaatata taagcataaa cttggattta tttaaaaata tttcaagatt
     1321 atgaaattta tatatgatgc gtatatttta tccgtatcat tgaaccaatc acactcttat
     1381 aaacgaaaac gacccataga gaatctgttt aaaaatgata tcgctcgagt attagatttg
     1441 tttattttta attccgagtt ttcatattcg acaaaagaac taagtgattt aaccgaaatt
     1501 ccatatcaaa acatccaaag gattttgata acattggtga agaagaaaat aattttagct
     1561 aaaaaatcag gcaacatgaa gagcttttcc ataaacaata attctgaact ttcaagagct
     1621 ctaataaggt ttgttcatca atccgttaac atggaaattg accaatttat taaaaattcg
     1681 cctgaaatga taataaaaag gtaataaacc cttttttgaa ttgttactca aaatatgaat
     1741 tgatcaagtt ttgaaaatat tctttgcaaa atccaacaag agcttaggta cgatggacta
     1801 tggcaaaata acaaagttgt atctctttgt cagaatttta attaagaaaa ttttctttaa
     1861 tgcctttttt gtaaaatctc atataataat tccactaaaa agctgaggta tatcgtgtga
     1921 aatttagtac gattgagttt ttaagaattt tgacatgaca ccattattat ttgatgatta
     1981 catttcctaa acctaattga tatctggatt aatttagcga tctcgtataa tttacgaatc
     2041 tcaaatttat atattgatta ttttttaaat tgatttaatt atgagccatt tctattaaag
     2101 ataatgccat tcatcgctgt atctatgtat ccaggaagat cggaagatca aaaaaaagaa
     2161 tttgccaaag aggttacgga tttggctgta aaaattctta aaacaaaagc agaacatgtt
     2221 atcgtagttt ttgatgagaa tccaaaagaa aattggtatt tgtcaggaaa aaacctctaa
     2281 tatcaaataa tcgataaaaa atattttttc tatagaagtc tttatttgat ttatctcatt
     2341 actgctgtgt ttgctgtatt ttttcgatat gctctaaacc gggtaaagcc tttatttctt
     2401 tacatctttt tctcaatgaa actgtagaaa tgtcagctac ttgacatatc tcaacttgtc
     2461 taatgaattc gtcacatatt tgagatgcca aatatatcac tgcgcctgca atcgctcttg
     2521 ggttttttcc tattgatatt cccctttgtt ctacatgacc aaagatttgt aatgcttccc
     2581 tcttggtttt ctcactaagt ttcagcctat tagatattat tgtaacataa tctggacctt
     2641 tagttgcagg aatgttaaga tctaattcat ttaaaatcaa tttataatga gacatcaatt
     2701 ccttgctggt tatgttacaa atttcagata catctagaat agtttttggt gttgaagcct
     2761 ctctacatgc tgcatacaat gaagctccaa ctaatcctat tgtcgatcta ccttttgcca
     2821 atttttttac tgctgctttt ctatagatgt atgcagcact ttcaataacc gcttgattaa
     2881 gacataattt atcaccaaag ttattaagat atttcagagc tttttctaga tttcttgata
     2941 cagaatcatt taattgagac ctgctgttcc atgtacggag tctctgaatc tccattcttt
     3001 gttttggttg caatactttg ccccttgcgt cagtgtcacc cattcctatc aaagttgaca
     3061 aacctctgtg atgaactgct aatgattctg gcattccggt tctgaacctg tcattaaaat
     3121 ctgattgcat aatataaccc tgaatagttt cattgtttag agaatcatta tttaaaacat
     3181 aaccacaaga tgaacaaaca aattcgtttg cagaattatc aaatataatg gcatctttgt
     3241 ggcaattttc acaatatgcc ggattatttg gatttggctt cgtagattcg tcttgtttct
     3301 tgtattccac taagttttca tagtatgcaa ttattttatt tatacgtttt ctagaaattc
     3361 gataaacaaa taatcttact atatatatta agaaatgtct tgataaaata tgattacgta
     3421 ataatctcta atgaatatat attatattct aaagaaatct aactttcatt aataataatg
     3481 tatgtgtttt gttttattta tgaataatgc taatttttgt tatgcatttt ttttatataa
     3541 caataatcaa ttttcttccc agtttccctc atattccaac acaacgttaa tcaaaccctg
     3601 tatccatgaa tgattttgat aggg
//
LOCUS       DATIAS010000714         2658 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1490744, whole genome shotgun sequence.
ACCESSION   DATIAS010000714 DATIAS010000000
VERSION     DATIAS010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490744"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VLA74_14385"
     CDS             complement(<1..525)
                     /locus_tag="VLA74_14385"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF51944.1"
                     /translation="MSQSAKEWSNAQNALAYLNVSDTLPHRSEGEAVLIEHISKDTNR
                     ILDLGTGDGRLIRLIKKNRPNIEAVALDVSPTMLKAARDHFANDSKVKVIEHDLSLPL
                     PDLDYFDAVISSFAIHHLKHERKKSLYEEIYDILTPTGVFCNLEHVASPSLELHIRFL
                     NAIGYTPKKEDRANK"
     gene            854..2008
                     /locus_tag="VLA74_14390"
     CDS             854..2008
                     /locus_tag="VLA74_14390"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSF51945.1"
                     /translation="MINNTNDYNKLCNLLAIKYPIIQAGMSGASTPELVAAVSNAGGL
                     GLLGATSLSLEDLSQNIKKIKCLTNRPFGINLLLAGPETDSADQLNIQHFLDTFRKEL
                     DIELKEESINKKIVLPKLSLSEKIKIIVEEEKVPLLSFGLGDPRPLVKQIHDANDTKI
                     MAMVTTVEEAIQVVENGADIVMAQGAEAGGHRSTFKINSNSELPLIGTMALVPQIVDA
                     LHKDSKNEKEIPAVVAAGGIVDGRGLIAALSLGASGVSIGTRFLLAKENSTFQAYKER
                     LLASKETDTIVTKIFSGRPARGIKNKLVERFINSEINPLPWPLQWFAAEDIYQSSLNN
                     NNADYYPLLAGQGLRILESIQSASEIVEEIVNEANDVLNNLNNQFNNTFH"
     gene            complement(2236..>2658)
                     /locus_tag="VLA74_14395"
     CDS             complement(2236..>2658)
                     /locus_tag="VLA74_14395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51946.1"
                     /translation="VSQHRPTGITIIAVLMIIGGLVLLFTGITPLFLGPLISLESSSD
                     YQISELGLLITIGGLTLVGLGVASLVVSWGLLKGKGWARTITLIISIIAIIFAIISLV
                     SSGDLVHVISVIIYGIIIYYMFTNKVKLFFGKVKEPTT"
BASE COUNT          974 a          410 c          424 g          850 t
ORIGIN      
        1 cttattagct cgatcctctt tcttaggtgt ataacctatg gcattaagaa aacgaatatg
       61 aagttcaagt gatggtgatg ctacatgttc aagattacag aagaccccag taggagtaag
      121 tatgtcataa atttcttcat aaagcgactt tttacgttca tgttttaagt gatgtatagc
      181 aaagctagat atgacagcat caaaataatc tagatctggc agtggtaaac taagatcatg
      241 ttctataacc ttaacctttg aatcattagc aaagtgatct cttgcagctt taagcatagt
      301 tggagataca tctaaggcta ctgcttctat atttggtcta tttttcttta ttaatctaat
      361 tagccgtccg tctcctgtac ccaaatctaa tattctgttt gtatctttag aaatatgttc
      421 aattaaaact gcctcacctt ctgaacgatg tggaagagta tcagatacat taagatatgc
      481 aagagcattt tgagcattag accattcctt tgcagattga ctcataattg aatttcataa
      541 aattataaat tttctaattc aaatactttt cttatgtgat agaatcgtca atagtaaaat
      601 taaactattt taatgttcaa tcgatttctt tttaaaaatt aggcacaaga ttgagatttc
      661 ataatatgat cacaggttat aaaagactaa gaattataaa aaatttaaaa atcattgaac
      721 catgttaatt gccattatct aagggagttg aatagtcatg gtttcagtgt tcaattacta
      781 atatctaatt tttttatcta ttacatataa ttcaacttta tctacaagat aatccataca
      841 aaaaacagaa ggtatgataa ataatactaa tgactataat aaattatgta accttttagc
      901 aataaaatat cctataatcc aagcaggaat gtctggtgca agcacaccag agttagttgc
      961 tgcagtatct aatgctggtg gattaggact attaggagct acttccctta gccttgaaga
     1021 cttaagtcaa aacataaaga aaataaaatg tctaacaaat cgcccttttg gcattaatct
     1081 tcttttggca ggtccagaaa ctgattctgc tgatcaattg aatatacaac attttttgga
     1141 tacttttcga aaagaacttg atattgaatt aaaagaagaa tcaatcaata aaaaaatagt
     1201 tctaccaaaa ttaagtttat ctgaaaaaat aaaaataatt gtagaagaag aaaaagtacc
     1261 actacttagt tttggattag gagatccaag accattagtt aaacaaattc atgacgccaa
     1321 tgatactaaa ataatggcta tggtaactac tgtagaagaa gcaatacaag tcgttgaaaa
     1381 tggagctgat atagtaatgg cacagggagc agaagcaggt ggacatcgct ccacatttaa
     1441 aattaattca aatagtgagc tacctctgat aggcacaatg gcacttgttc cgcagatagt
     1501 agatgctctt cataaagata gtaagaatga gaaagaaata cctgctgtag tagctgctgg
     1561 tggaatagta gatgggagag gtttaattgc agcactaagt cttggtgcat ctggtgtatc
     1621 tattggtact cgttttctat tagctaaaga aaattctaca tttcaagcat acaaagagag
     1681 attattagca tcaaaggaga cagatacaat tgttacaaaa atattttcag gtagacctgc
     1741 tcgtggtatt aaaaataaat tagtagagag atttataaac tcagaaatta atccattacc
     1801 ttggcctctt caatggtttg ctgcagagga catttaccaa tcttcattaa ataataataa
     1861 tgctgactat tatcctcttc tggcaggaca aggactccgt attcttgaga gcatacagag
     1921 tgcatctgag atagtagaag agattgtaaa tgaagctaat gatgttttga ataatttaaa
     1981 taaccaattt aataatactt ttcattaaaa ttttcgctta tgataaaaaa accataacca
     2041 aattaaattt aagttactga tgataaaaaa atatttttat aattattccc aaatagatga
     2101 acccgagaaa actacgggcc cgtcgggagt aataccgata gcggtgctaa aagtggagtc
     2161 caatgtagaa atactactac ctgctattta gcttttatta tttagaatca tattgtaaat
     2221 tgtttttaaa ataaattagg tagttggctc tttaacctta ccaaaaaaca gttttacttt
     2281 gtttgtaaac atatagtaaa ttattatacc atatattatt actgaaataa catgtactaa
     2341 atcaccacta cttacaagag aaataattgc aaatattatt gcaattatgc tgattatgag
     2401 tgtaattgta cgagcccatc cttttccttt taaaagaccc catgaaacaa ctaaacttgc
     2461 tacccccagt cctactaatg ttaaaccacc tattgtaata agtaatccta attcactaat
     2521 ttgataatca gaagaagatt ctaagctaat tagaggacct aaaaatagag gagtaattcc
     2581 agtaaataaa agtactaatc caccaattat cataagaaca gcaattatag taattccagt
     2641 tggacggtgt tgagacac
//
LOCUS       DATIAS010000715         2168 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2037528, whole genome shotgun sequence.
ACCESSION   DATIAS010000715 DATIAS010000000
VERSION     DATIAS010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037528"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VLA74_14400"
     CDS             <1..1041
                     /locus_tag="VLA74_14400"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HSF51947.1"
                     /translation="EQLTAPKKSTATLEDLIGGGAKAGAGVVPVGKNEVCKITKLDLK
                     SGDTGDDISIIQKNLKELGYYPYDVIDKKFGSQTEMSVRLFQISNKLPVTGIVDKTTQ
                     EKICTASTDKNKHKELILNNFVKNPNVSTLDLLKDGQKFKQFKWHANDYIGLPKGPNE
                     NEAVKLVNSLKNIILEDRVTLPPNAILLNATYQQDKIRYNDYFHKQTQQMKDFPSQRM
                     NKHAIVWFDKMREAAKADGIEIVPLSVWRNPVVDEERAKQAKNPYAIGGISHALGVTI
                     DIKMSDGNKKYSEAATKPFSNVIDMRSSPIHKWLAIFAKDFNFHPFTHEPWHWEYNYK
                     NFKDVFLSEFKK"
BASE COUNT          852 a          286 c          333 g          697 t
ORIGIN      
        1 gaacaactaa cagctccaaa gaaaagtaca gcgacacttg aagatttgat tggtggtggc
       61 gctaaagctg gtgccggtgt agtaccagtt ggaaaaaatg aagtttgtaa aattacaaaa
      121 cttgacttaa aatcagggga taccggagat gacatcagta ttattcaaaa aaatcttaaa
      181 gaattaggat attatccata tgatgttata gataagaaat ttggatcgca aacggagatg
      241 tctgtaagat tgtttcaaat ttctaataag ttaccagtaa cagggattgt agataagaca
      301 acacaagaaa agatatgtac tgcttctact gacaagaata aacataaaga attgatatta
      361 aacaattttg ttaaaaaccc aaatgtatct actctggatt tattaaaaga tggacagaaa
      421 tttaagcaat ttaagtggca tgccaatgat tatataggtc tacctaaagg acctaacgaa
      481 aatgaagctg taaaactagt aaactcatta aaaaatataa tattagaaga tcgtgttaca
      541 cttcctccaa atgcgatatt attaaacgct acatatcaac aagacaaaat aagatataat
      601 gattattttc acaaacagac tcagcaaatg aaggattttc cgtcacaaag aatgaacaaa
      661 catgcaatag tttggtttga taaaatgagg gaagccgcta aagccgatgg aattgaaatt
      721 gttccattat ccgtatggcg taatccagtc gttgatgagg aaagagcaaa gcaagcaaag
      781 aatccttatg ccattggagg catttcacat gcactaggag taactattga cataaaaatg
      841 agtgatggca ataaaaaata ttcagaagca gcaactaaac catttagtaa tgtaatagat
      901 atgagaagtt cacctatcca taagtggcta gccatatttg caaaggactt taatttccat
      961 ccatttaccc acgaaccatg gcattgggaa tacaattata aaaacttcaa agacgttttc
     1021 ctctcagaat ttaaaaaatg agttaacagg ttcgttaact cattttaaat ttaatgataa
     1081 aaaattaaaa taattgagtt aacaattatt tacatttact taaataacat tgaaagtata
     1141 taccctcatt acatattcta taaattatat aataattaaa tataaaaaat gtggctctgc
     1201 ctatatgaaa atttaattca gtactagaat ctcaggaaat atgtaagtga gaatacataa
     1261 tacattagaa gataatggaa tagatacaat actagtaaat ctatacaaga caaagataat
     1321 agcatcgaaa agataaaacc agataacctt gatgctccta taatatctta tctgatcaag
     1381 aactggatta atatatgagt cagatgtatc aataagagaa acctaattag atacaagtta
     1441 tccttgtcta gaactaggac aaaattaaaa aaacttaatt ttatacaaaa ctttaaatat
     1501 taaattctct aaatttaata gaataaatat cttaaagtat ggaagacagt tctcctggcg
     1561 ataaatggtc attaatataa agaattattc cttcataaaa cagaattaga tgaattggta
     1621 aaaaaatagt tttcttgagt atcttaatat atagattgat caaggtaacc tagtatgttt
     1681 tatgtatatt gcatttatag actgaaaaat attgatcatt ttatctggat atatcattca
     1741 tactatttta ccgcaatcct cacatattac tagtctacca tatttatcaa aatcttgtaa
     1801 tgaataataa ttaatagggt aggacttata actttgggat tattatatag gtcacataac
     1861 tttgcctatt tatgcttttt agagttgctt tagaattgaa cgatgcagca gcagaagatt
     1921 gggttgaaga tttagttttg ttagtgttat atatattaga tcttttgggt aattagcaag
     1981 gaatcaaaat attctgaaag tataactaat ttttgtaaat tttataaata taataatatt
     2041 attctctttt atcttagatc aaatatgtaa tattttaaat ggttgttaat tacgcaaaag
     2101 atctaatctg ttgtctgatt ttcgtttgaa aaatcactat tatcttcttc tgttgttatt
     2161 gtcatttt
//
LOCUS       DATIAS010000716         2115 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1220560, whole genome shotgun sequence.
ACCESSION   DATIAS010000716 DATIAS010000000
VERSION     DATIAS010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220560"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VLA74_14405"
     CDS             complement(<1..467)
                     /locus_tag="VLA74_14405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51948.1"
                     /translation="MFSYVTLFSYLIGFILSISLVYISIYAENAKFDKGTIVIAEDPF
                     YQSINGTVTSTRILNVEGILQSEVSFFENALINGNITILNQGTFLESIYPNKIIGKGK
                     GIITSSDGQRVTWNAEDIGKVTRNGSIIYQGLIHFDTTSNGSLSFLKDSVGLYV"
     gene            complement(959..>2115)
                     /locus_tag="VLA74_14410"
     CDS             complement(959..>2115)
                     /locus_tag="VLA74_14410"
                     /inference="COORDINATES: protein motif:HMM:NF013275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSF51949.1"
                     /translation="SIGKPVKVALEKAEHDVNKYFEKMNSSSRFNLVMANSKTSPEDS
                     LEALKQLHSAGAKIIVGPATSTAVSAAKDYADTNDIILISYSSTSPLLSIEGDNLFRL
                     VPDDINQGKVIAERMIDDGIKVVVPMWRGDIYGNELYKATKYHFEKLGGKMVEEGINY
                     KPHTGKFATSLHRINFIMWNEDLEKLNSIVADAIKKYGNKSVGVFIISYDEITPILIQ
                     SPMYRSLGDIRWYGSDSIAQNHHITKNIDSALFAVKTNFSNPLYSIDTKSPKIHELIE
                     MLEKELHDGRESITYPAIAYDSFWISSLSLEKNSTISNYLDSKNIKKSFKDIVFETAE
                     SFDNGISGKIQLNDAGDRIGENYDFWSITKHSKKNQYAWKIENVPIRSNH"
BASE COUNT          683 a          345 c          304 g          783 t
ORIGIN      
        1 acatagagac ccactgaatc tttcaagaaa ctaagcgaac cattggacgt tgtatcaaaa
       61 tggatcaagc cttgataaat aatacttcca tttctagtta ccttaccaat gtcttctgca
      121 ttccatgtaa ccctctgacc atctgatgat gttattatac ctttaccttt tccgatgatt
      181 ttattcggat aaatggattc aagaaaagtt ccttgattta atattgtaat atttccattt
      241 attagagcat tttcaaaaaa tgacacttca ctctgtagta ttccttcaac attcaaaatt
      301 ctggttgaag taaccgttcc attaatcgat tggtaaaatg gatcttctgc gataacgatt
      361 gtacctttat caaatttggc attttctgca taaattgaga tataaaccaa ggaaatagat
      421 aaaataaatc cgatcaagta tgaaaataaa gttacataac tgaacataga agatattagt
      481 cattgcaaat taaaatatct ttagattact aaataaaata cttttaatgg attactcttg
      541 attttattcc ttattgtctc gaatcagtgg gtgatttatt tagaattagt atattatttg
      601 tccctatttg aagatgatga gatgttcttt cggccctgac tatatgaaaa tctttattgg
      661 gtcccaatcc attttgtatt caggctaggt tcaaagttaa catactccgt acgagagtgt
      721 tcttaactta atagagccaa aaaagaattc taaaaaattg taaattatta tctattttta
      781 gaatagagat gttcttatgc aattttaaat tatactatgc tcatccgcat tgttagttga
      841 aagcaataga gtttcattaa ataaatctag agaaatcgta tttggttgaa gattattttt
      901 acaaaatatc agacaaaaac agaaatgtat taagttacta caaatgatat acatatatct
      961 aatgatttga tcttattgga acattttcta ttttccaggc atattgattt tttttagaat
     1021 gtttagttat gctccagaaa tcataatttt ctccaattcg atctccagcg tcattaagtt
     1081 gtatttttcc tgaaatacca ttatcaaaag attctgctgt ttcgaaaaca atatctttaa
     1141 atgatttctt tatatttttt gagtcgagat agttactaat agtactgttt ttttccaagc
     1201 ttaaagaaga aatccaaaaa gaatcataag ctattgcagg atatgttata gattctctcc
     1261 catcatgcaa ttccttttct agcatttcaa ttaattcatg aattttcgga gattttgtat
     1321 ctatagaata caaaggattt gaaaaattgg ttttaactgc aaatagtgca gaatctatat
     1381 tctttgtaat atgatgattc tgagctatac tatcacttcc ataccatctg atgtcaccaa
     1441 gcgaacgata cataggagat tgaattaaga taggtgttat ttcatcataa gatattataa
     1501 aaactcctac agatttattg ccatattttt ttattgcgtc agctacaata ctgtttaatt
     1561 tttccagatc ttcattccac atgatgaaat taattctatg taaacttgta gcaaatttgc
     1621 ctgtatgtgg tttgtagttt atcccctcct ctaccatttt tccacccaat ttttcaaaat
     1681 gatattttgt agctttatag agttcatttc catagatatc acctctccac atcggtacaa
     1741 cgactttgat tccatcatca atcattcgct ctgcaataac ctttccttga ttgatatcat
     1801 ctggtacaag tcggaaaagg ttatctcctt ctatagaaag taatggagaa gtactagaat
     1861 agctgataag tataatgtca ttagtatctg cataatcttt tgcagctgaa actgcagtgc
     1921 ttgtagcagg cccaacgata attttggctc cagctgaatg taattgtttt aatgcctcaa
     1981 gagaatcttc tgggcttgtt tttgagtttg ccataacaag attgaacctt gatgaagaat
     2041 tcattttttc aaaatattta tttacgtcat gctcagcttt ttccaaagct acttttacag
     2101 gttttccaat tgacg
//
LOCUS       DATIAS010000717         2138 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1491259, whole genome shotgun sequence.
ACCESSION   DATIAS010000717 DATIAS010000000
VERSION     DATIAS010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491259"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..1053
                     /locus_tag="VLA74_14415"
     CDS             82..1053
                     /locus_tag="VLA74_14415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51950.1"
                     /translation="MVRLEYKSLVTKETIDYYLSIIKDDEKQKKNLLSTVSKFDIRIS
                     TKPVIEEEYEEFHYKIWIWRRGTKKRAHIKLYNRLELLKKEEGESKKTILLPSLGIIL
                     CWIRTYANVPEDFEEYCEITWRDPSDETSRTSHPRHLKRAERFKKFITKEEIKSIPAF
                     LPCYDKDLSLVDDDEFYDLDYGKYPVFLDSNSIFLKKREYDKLADVKSTLEYHAKIVE
                     RYGYDPYTGEYDTKKFPITKEDKQKENIDKDFDNFDQALEEYVNCLKELIKKYGIKST
                     GNLQRLTFKIDTNYNDNRINSKQSQLPNFDSKYISVTVDCDYFVPDA"
     gene            1222..1761
                     /locus_tag="VLA74_14420"
     CDS             1222..1761
                     /locus_tag="VLA74_14420"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HSF51951.1"
                     /translation="MILPTRVLQPGGSLVFLVGHIILDQVIGIFNDFSLTNNNSTKLK
                     YWWTLAVKHSGHHTKIYARNVFPEWKPLLWYIKGEKLNDLVVSNTMGDYIESTPPSKI
                     EHEWQQSTFEAEYIIKNLTIENQTVLDVIMGTGTTGIAALKLNRKFIGIEKNLETFEI
                     AKVRINKQEFEKRIKEGNY"
     gene            1765..2019
                     /locus_tag="VLA74_14425"
     CDS             1765..2019
                     /locus_tag="VLA74_14425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51952.1"
                     /translation="MNFYHGYKDRDDDRLGKNDERKISFYNYYKPCDDCGEIFLKSDL
                     IYVTTGNDDPQNIVETLRLCAECLTAINHEHDEQIFNRKR"
BASE COUNT          896 a          257 c          344 g          641 t
ORIGIN      
        1 attattacta ttatctttat aataaatgaa taataaccaa aaattataaa aatataaact
       61 tatgcaatag tagataataa aatggtcaga ttagaataca aatctttggt aactaaagaa
      121 actatagatt attatctttc cataataaaa gatgatgaga aacagaagaa aaatctacta
      181 agcacagtat ccaaatttga tataaggata tctaccaaac ctgtcataga agaagaatat
      241 gaagaatttc attacaaaat atggatatgg cgaagaggca caaagaaaag ggcacatata
      301 aaattatata ataggttaga attactaaaa aaagaagaag gagaatcgaa aaaaacaata
      361 ttactgccaa gtcttggaat aatactttgt tggataagaa cttatgcaaa tgttccagag
      421 gattttgaag agtattgtga aataacatgg cgagatccat cagatgagac tagcagaact
      481 tctcatccaa gacatttgaa gagagcagaa agatttaaga aatttattac taaagaagaa
      541 attaaatcta ttcccgcttt tttaccttgt tatgataaag atctaagtct tgttgatgat
      601 gatgaatttt atgatttaga ctatggtaag tatccagtat ttttagatag taatagtata
      661 tttttaaaaa aaagagaata cgataaactg gcagacgtaa agagtacttt ggaatatcat
      721 gcaaaaattg tggaacgtta tggttatgat ccatatacag gtgagtatga cacaaaaaag
      781 tttcctatta caaaagaaga taaacaaaaa gaaaatatag ataaagactt tgataacttc
      841 gatcaggcat tagaagaata tgttaattgt ttaaaagaat taataaaaaa atatggtata
      901 aaatcaacag gaaatctcca acgactaacc tttaaaatag atactaatta taatgataat
      961 aggattaatt caaaacaatc acaactgcca aattttgatt caaaatatat ttcagtaact
     1021 gtagattgtg actattttgt tcccgatgca taaacaacta tatcaaaaaa attttctttt
     1081 cttaaaacaa tagtttggga ataaaataat caatataagg aaagtattgt ccatattctc
     1141 ctatcgtcgg gaattacaaa atcgagtgca aaatctcgac aaatatttgg acgatatgaa
     1201 aaaggtccca tcaacgatct agtgatatta ccaactagag tattacaacc cggtggaagt
     1261 cttgttttcc ttgttggtca tatcatatta gatcaagtta tcggaatatt caatgatttt
     1321 tctttaacta ataataattc tacaaaacta aaatattggt ggacattagc agtaaagcat
     1381 tcaggacatc atacaaaaat atatgcaaga aatgtgtttc cagaatggaa accattgttg
     1441 tggtacataa aaggtgaaaa actaaatgat ttggtcgtat ctaacacaat gggcgactat
     1501 attgaatcta ctcctccatc aaaaatagag catgaatggc aacagtcaac atttgaagca
     1561 gagtacatta taaaaaattt aacaattgaa aatcaaacag tattagatgt aataatggga
     1621 actggtacta cgggtatagc agcattgaaa ttaaacagaa aatttattgg aatagaaaaa
     1681 aatcttgaaa catttgaaat tgctaaagta agaataaaca aacaagaatt tgaaaaaaga
     1741 attaaggaag gaaattacta aataatgaat ttctatcatg gatataaaga tagagatgat
     1801 gatagattag gcaaaaatga tgagaggaaa ataagtttct ataattatta caagccatgt
     1861 gatgactgtg gagaaatttt tctaaaatct gatctaattt atgttactac cggtaatgat
     1921 gatcctcaga atatagtaga aacacttaga ctctgcgcag aatgtttaac agcaatcaat
     1981 catgaacatg atgaacaaat atttaataga aaacgataaa catatctata tttcagtgtg
     2041 attgtacttt aacgtaagtg atagtatgag taaaatttga tatatcctta tagttgtatg
     2101 gtttttttcg tagattattt gtagacattt aacagagc
//
LOCUS       DATIAS010000718         5494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1491290, whole genome shotgun sequence.
ACCESSION   DATIAS010000718 DATIAS010000000
VERSION     DATIAS010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5494
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491290"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VLA74_14430"
     CDS             <1..235
                     /locus_tag="VLA74_14430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51953.1"
                     /translation="YHMGDIHRLISAEFSKDEMSIRDIKELKINLSSLINMLLTKSDK
                     IDKVRIKIDSQLATVPNFKDSLADKIAVEEFNF"
     gene            257..979
                     /gene="cas5b"
                     /locus_tag="VLA74_14435"
     CDS             257..979
                     /gene="cas5b"
                     /locus_tag="VLA74_14435"
                     /inference="COORDINATES: protein motif:HMM:TIGR02592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I-B CRISPR-associated protein Cas5b"
                     /protein_id="HSF51954.1"
                     /translation="MNISKILAFDVWGEYACFRRPYSTTSPLTFPFPTRTVISGFVAA
                     ILGLDRDSYYDDFSNENCKIGINLLSPIRKTYIGQNLIDTKKGFYLWDISENQRTQIL
                     FEVLKDVKFRLYLWLKDTTLFQLLENHLNNHTSVYTPYFGLANMLANFHFIDRYKNIK
                     KKEANNTNVSTIVPESFGVKSIPGHRIGRIKMPLYFDKERTPSFDTLIYDTCHDYDET
                     HQLTITRGEYYQIDDNLNIVLI"
     gene            1001..3493
                     /gene="cas3"
                     /locus_tag="VLA74_14440"
     CDS             1001..3493
                     /gene="cas3"
                     /locus_tag="VLA74_14440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase Cas3'"
                     /protein_id="HSF51955.1"
                     /translation="MFKLKSHPSPEDTLFRHLSNVGFSCKEKLSDYKHYQFSKHKCYD
                     DVIFSAYIIGVTHDFAKATSFFQNMLFQDNNRSIYSTHSALSALFTYFVCSKIFPSNI
                     ELQCLSYIVVKRHHGNLRNILNVEADEDGFNIDVISKQIQNILTMDSKGFKAIDELKE
                     IYKILLPSINLDDFFSINLIQLFKDIRRNLKKIVMSENIDNYFLLIALYSVLQIADKT
                     DAGKLPTPPRLCNLDTEIIYKYRQANFFSLSDKMSYLRNDAFNNIVENIGHLDIVNDR
                     ILSITLPTGFGKTIMGLTSALLIRKKAQHDLGYQPRIIYSLPFLSIIDQNAQVFKKIL
                     SYNYINIEDIPSNMLIIHHHLSDFTYRFINKKNHWSEEEEALDSNNDEFEAITYRSSL
                     FLTEGWNAEIIITTFIQLFESLITNNKNRLRKFNSISGSIIILDEIQAIPSKYWDVIE
                     NSLNYICKEFGCWILFMTATKPALLDFSKELSSKNYQYDERVKYKITKENSINSLSDF
                     VLSLIKIKDSILVVLNTIGSSRELYGLIKNKLNLFYDEQSTVNEDGICLFKDLRLVYL
                     STYVLPHTRLKRISDIKNNKHKNNKQNETIKTIVISTQVVEAGVDLDMDCVIRDFAPL
                     DSIIQCAGRCNRNAQNKKLGEVIIVDLMDELNNNREFCRYIYDNVLLSITRNMLASYP
                     ENILIDEKDITGLIDSYFKKVKDSKESEPVIENMKNLHFDKVKEFELIEDYDSVQVFV
                     EFDSQAKEIREKIANNELPDKIKFLPDIKRLFNSYTLNIRKCKEMEVASMLPLIEGTE
                     IRYIPMEQMLTWYDLETGIDLKLDRAIEMQII"
     gene            3490..4005
                     /gene="cas4"
                     /locus_tag="VLA74_14445"
     CDS             3490..4005
                     /gene="cas4"
                     /locus_tag="VLA74_14445"
                     /inference="COORDINATES: protein motif:HMM:NF014040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HSF51956.1"
                     /translation="MNIDLNNSRVTGVMVQYYTACKTELWYFANNISYNDEDENIRIG
                     RLIHKDSFENEKKDVQIDNCISIDYIKNEKNDVVIHEIKKSSKLLEPVKDQVLFYMWF
                     LKNKGINTRAIITFPKERKRQKVILSKDEEIRIENILRDIRNIISLTSPPSPKKKPYC
                     KRCSYFNLCWC"
     gene            4011..5015
                     /gene="cas1b"
                     /locus_tag="VLA74_14450"
     CDS             4011..5015
                     /gene="cas1b"
                     /locus_tag="VLA74_14450"
                     /inference="COORDINATES: protein motif:HMM:TIGR03641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004520 - DNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I-B CRISPR-associated endonuclease Cas1b"
                     /protein_id="HSF51957.1"
                     /translation="MRINYYIKSHGILSRKENTLYFIKKLEDGEIKKIPIPIEKVFAI
                     FCYGRVTLSSGSIHILSKYNIPVHFFNKYGFKVGTYFPRPKKVSGRVLLAQVSYYLDN
                     LKRIVLARTFVKGALSNILINMKYYRRTYHEIFPLEEKVQRYIDQLENVNTVNELMGN
                     EANARKEYYKMFDLILPTPFKFETRSMRPPKNMFNSLLSFGNSLVYSTVLSEIYTTHL
                     DPTISFLHELYDRRFSLSLDISEVFKPLLSDRVIMHLLMKREIGPECFNSDLNGILLN
                     NNGRTKFLKHYEEKLMTTIKHRSLKRNVSYRGLIRLECFKLMKHLLEIEAYKPFVIWW
                     "
     gene            5092..5355
                     /gene="cas2"
                     /locus_tag="VLA74_14455"
     CDS             5092..5355
                     /gene="cas2"
                     /locus_tag="VLA74_14455"
                     /inference="COORDINATES: protein motif:HMM:TIGR01573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HSF51958.1"
                     /translation="MYIIVAYDIQIERIDDVRKYLKRYLNWIQNSLLEGEVTKSELEE
                     IKNNLTKLIDMEKDHIVIYELRSNDLFIRENIGKAKLDASNII"
BASE COUNT         2141 a          678 c          823 g         1852 t
ORIGIN      
        1 ataccatatg ggagacattc acagattgat ttcagcagag ttttcaaaag atgaaatgtc
       61 tataagagat attaaggaat taaagataaa tctatctagc ttgataaata tgttactgac
      121 aaaatctgat aaaattgata aagtaagaat aaaaatagat tctcaattgg caacagttcc
      181 taactttaag gattctcttg cagataaaat tgcagtagaa gaatttaatt tctaaatttg
      241 tttttaagcg attattatga atatttcaaa aatacttgct tttgatgtat ggggagaata
      301 tgcctgtttt agaagacctt attctacaac ttctccactc acatttccat ttcctacaag
      361 aacggtaatt tcaggttttg tcgctgctat tttaggatta gatcgtgatt cttactatga
      421 tgatttttca aatgagaatt gcaaaattgg tattaatctt ttatcaccaa taagaaaaac
      481 atacattggt cagaatctta tagatacaaa aaaaggattt tatttatggg atatttcaga
      541 aaatcaacgt actcagatcc tttttgaagt attaaaagat gttaaattta ggctttattt
      601 atggcttaaa gacactacat tatttcaact tctagaaaat catctaaata accatacttc
      661 agtttatacc ccctactttg gactagctaa tatgctagca aattttcatt ttatagatcg
      721 atataaaaat attaagaaaa aagaagcaaa caataccaac gtatctacaa tagtaccaga
      781 atcttttgga gtgaaatcta ttccaggtca tagaatagga agaataaaaa tgcctttgta
      841 ttttgataaa gaaagaacac cttcatttga tactttgatt tacgatacat gccatgatta
      901 tgatgagact catcaactta cgattacaag aggggaatac tatcaaattg atgataactt
      961 gaatattgtt cttatttgaa aggtcaaata aatcttcaaa atgtttaaat taaaatcaca
     1021 tccatcacca gaagatactt tatttagaca tttaagcaat gttggttttt cctgtaaaga
     1081 gaaactttct gattataaac attaccaatt ttcaaaacat aaatgttatg atgatgttat
     1141 ttttagcgcc tatattatag gagtaactca tgattttgct aaggctacat cattttttca
     1201 aaatatgttg tttcaagaca ataatagatc tatatattcg actcatagcg ccctttcagc
     1261 tttatttaca tattttgttt gttcaaaaat atttccatca aatatagaat tacaatgttt
     1321 gagttacata gttgttaaaa gacatcatgg aaatcttaga aatattttga atgtagaagc
     1381 tgatgaagat ggttttaata ttgatgtgat ttccaaacaa atacaaaaca tcctcacgat
     1441 ggattcaaaa ggtttcaaag ctatagatga attaaaagaa atttataaaa ttcttctacc
     1501 atcaattaac ttagatgatt ttttcagtat caatcttatt caacttttta aagatatacg
     1561 ccgcaattta aaaaagattg taatgtctga aaatatagac aattattttt tattaattgc
     1621 actatattct gtcctgcaga tagcagataa gacggatgca ggcaaactac caactccacc
     1681 aaggttatgc aaccttgata cagaaataat ttacaaatac agacaagcaa attttttttc
     1741 attatcagat aaaatgtctt atctaagaaa tgatgctttt aataatattg tcgaaaatat
     1801 tggtcattta gacattgtca atgatagaat tctttccata actcttccaa caggttttgg
     1861 aaaaactatt atgggattaa cctctgcttt attaatacga aaaaaagcac aacatgattt
     1921 aggatatcaa ccaagaataa tttattcact tccttttctt agtatcattg atcaaaatgc
     1981 tcaagttttc aagaaaatat tgtcttataa ctatattaat attgaagata ttccttcaaa
     2041 tatgttaatt atacatcatc atctttcaga ttttacttat agatttatta ataaaaaaaa
     2101 tcattggtca gaagaagaag aagcattaga tagtaataat gatgaatttg aggcaattac
     2161 atatcggtct tcactttttc ttactgaagg ttggaacgca gaaattataa taactacatt
     2221 tatacaatta tttgaatcgc taattacaaa taataaaaat aggctacgta aatttaatag
     2281 tatttcaggt tcaattatta ttcttgatga aatacaggca attccctcga aatattggga
     2341 tgttatagag aattcactga attatatttg taaagaattt ggatgctgga tactatttat
     2401 gactgcaaca aaacctgctt tattagattt tagtaaagaa ctatcatcaa aaaattatca
     2461 atacgatgaa agagtaaagt ataaaataac taaagaaaat tctataaact cactatcaga
     2521 ttttgttctt tctcttataa aaataaaaga tagtattcta gtggttttaa acaccatagg
     2581 atcctcaaga gaactttatg gtctaattaa gaataaatta aatttatttt atgatgaaca
     2641 atcaacagtt aatgaagatg gtatatgtct tttcaaagat ttaagattag tatatctttc
     2701 tacttatgta ttgcctcata caagattgaa acggatatca gatattaaaa ataataaaca
     2761 taaaaataac aaacagaatg aaacaataaa aacaattgta atatcaacac aagtagtcga
     2821 ggctggtgtg gatcttgata tggattgtgt aattagagat tttgcacctc ttgattcaat
     2881 tattcaatgt gcaggacgtt gtaatagaaa tgctcaaaat aaaaaacttg gagaagtaat
     2941 aatagtagat ttaatggatg aattaaataa taacagagaa ttttgtagat atatttatga
     3001 taatgttctt ttatctatta cacgtaatat gcttgccagc tatcctgaga atattttgat
     3061 agatgaaaaa gatattacag gtctgattga tagttatttt aaaaaagtaa aggactcaaa
     3121 agaaagtgaa ccggtaatcg aaaatatgaa aaatttacat tttgataagg taaaagaatt
     3181 tgaattgatt gaagattatg actcagttca ggtatttgta gaatttgata gtcaagcaaa
     3241 agaaattaga gaaaaaatag caaataatga actacctgat aaaatcaagt ttttaccaga
     3301 tataaagcga ttatttaata gttatactct caatattagg aaatgtaaag aaatggaagt
     3361 tgccagtatg ctaccattaa tagaaggaac agagataagg tatattccaa tggaacagat
     3421 gctgacttgg tatgacttgg aaactggaat tgatttgaaa ttagatagag ctatcgaaat
     3481 gcaaataata tgaacattga tcttaataat agcagagtta ccggtgtaat ggttcaatat
     3541 tacactgctt gtaagactga attatggtat tttgcaaata acataagcta taacgatgaa
     3601 gatgaaaata taagaatagg cagactgata cacaaagatt catttgaaaa tgaaaagaaa
     3661 gacgttcaaa tagataattg tatatcaata gactatatta aaaatgagaa aaatgatgta
     3721 gtaatacatg aaataaaaaa atcaagcaaa ttgttagagc ctgttaaaga ccaagttcta
     3781 ttttatatgt ggtttcttaa aaataaaggg atcaatacac gtgctattat tacatttccc
     3841 aaagaaagaa aaagacaaaa ggttatctta tccaaagatg aagaaattcg tattgaaaat
     3901 atattgaggg atataagaaa tataataagt cttactagcc ctccctctcc aaagaaaaaa
     3961 ccgtattgta aaaggtgtag ctattttaat ttatgttggt gttagtacat atgagaatta
     4021 attactatat caaaagtcat ggaatcttat ctagaaaaga gaatacatta tactttatca
     4081 aaaaattaga ggatggtgaa attaaaaaaa ttccaattcc aattgaaaaa gtttttgcaa
     4141 ttttttgtta tggtagagtc actttaagtt ctggtagtat acacatatta tcaaaatata
     4201 atataccagt acattttttt aataaatatg gcttcaaagt aggtacctat tttcctagac
     4261 ctaaaaaagt atcaggaaga gttttgttag cacaagtatc atattatttg gataatttaa
     4321 agagaatcgt actagctaga acttttgtaa aaggtgcatt atctaatatt ttaattaata
     4381 tgaaatatta tagaagaaca tatcatgaga tttttccact tgaagagaag gttcaaagat
     4441 atattgatca actggaaaat gtaaatactg taaatgaact tatgggaaat gaagctaatg
     4501 caagaaaaga gtattataaa atgtttgatt tgattctgcc aactccattt aaatttgaaa
     4561 cccgctcgat gcgtccacca aagaatatgt ttaattctct tttgagtttt ggcaattctt
     4621 tagtttattc aaccgtactc agcgaaattt atactaccca tttggatcct acgattagtt
     4681 ttttacatga gctttatgat cgaagatttt ccctatctct tgatatcagt gaagtcttca
     4741 aaccattatt atctgacaga gtaataatgc atcttttaat gaaaagagag ataggtccag
     4801 aatgttttaa ttctgatctc aatggcatat tattaaataa taatggaaga acaaaattcc
     4861 ttaaacacta tgaagagaag ttgatgacaa ctataaaaca tcgatcactt aagagaaatg
     4921 tttcttatag ggggttaatt agattagaat gtttcaaact tatgaaacat cttcttgaaa
     4981 tagaagcata caaaccattt gttatatggt ggtaaaagat tgaaatgaag ataattgtct
     5041 ttttattctt ttcatttact ttttttctcc tattatccag tgtgatcgaa aatgtatatt
     5101 atagtagcat atgatataca aatcgaaaga attgatgatg tccgtaaata tttaaaacga
     5161 tatttaaatt ggattcagaa ttctttattg gaaggagaag taaccaaatc agaactagaa
     5221 gagataaaaa ataatttaac aaaattaata gacatggaaa aagatcatat agtaatatat
     5281 gaattaagaa gtaatgatct tttcataaga gaaaatatag gaaaagcaaa actagatgct
     5341 tcaaacataa tttgattgat aattgtcgtg gatgtttata tacaggatta agaattatct
     5401 atacacaata aaaaatgctt attattttat aataatgagc ataatttata cggggtttga
     5461 atttgactaa aataggtttg aaacgatggt tact
//
LOCUS       DATIAS010000719         2162 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1626293, whole genome shotgun sequence.
ACCESSION   DATIAS010000719 DATIAS010000000
VERSION     DATIAS010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626293"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..1171
                     /locus_tag="VLA74_14460"
     CDS             74..1171
                     /locus_tag="VLA74_14460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51959.1"
                     /translation="MKSDHKTITFSMVAILLVSLIASTNLGNQISFAQEKIYFTSFSA
                     VNSYAQQNEKAQNLTETNIPKVLPLVRGFADGNEVFYITTEVSDEKLASYLSKLSKSR
                     VVYTPALKNTPAQSLANIYEFTNGIKGSGPQGFQPNVADSQPGDNNYSPLWKVNLVTW
                     NNDTMPRELTSEEDILKAVKNKELTIKPTDIIVNCPFVQWKDGSLKVRENKTLTDESP
                     YGGGQVLDIDTKKMQVTFVAHRGFAPDGSTIYYIATDASVKQVADDLGVVFVNKTDPT
                     LKSGSSSDLYVFTNGIKGNGPMGYQASIASTNAGDEAYSPLWRIQTVIWKDPAQTQFL
                     TSLNEITEHAKKGHIKTEIAGVIVNCPFVEA"
     gene            1214..1636
                     /locus_tag="VLA74_14465"
     CDS             1214..1636
                     /locus_tag="VLA74_14465"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSF51960.1"
                     /translation="MVERKEFGLFAARIGMAFTFCWPGINKINNSESSNFGQWLLNSI
                     GFDPTTAIQIVSGMGTLEVLFGIFIGVGFLTRPSAIFMIIILVGSQAMFGFIYTQGPA
                     IWKDPGLLGLAILLLFSGAGKFSIDYLISKRTKIYQNN"
     gene            1947..2093
                     /locus_tag="VLA74_14470"
     CDS             1947..2093
                     /locus_tag="VLA74_14470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51961.1"
                     /translation="MGPKFTSNLFHDFLELIMRGTKIKIKTKLKDSVGFETLDKVGPV
                     KLIQ"
BASE COUNT          800 a          315 c          368 g          679 t
ORIGIN      
        1 aaattttaat aatcttacag taaccttaca gtaagtatca aatcttaaat attattaaaa
       61 aatttttatg cttatgaaat cagaccacaa aacaataaca ttttcaatgg tagcaattct
      121 tcttgtatca ctgattgcaa gtacaaatct cggaaatcag atttcttttg cacaagaaaa
      181 gatatatttt acgtccttct ccgcagtaaa ttcttatgca caacagaatg aaaaagcaca
      241 aaatcttacg gaaacaaata ttccaaaggt tcttcctcta gttagaggtt tcgcagatgg
      301 taatgaggta ttctatatta caacagaagt atctgatgaa aagctagcga gttacctttc
      361 aaaactatct aaatcaagag ttgtgtatac tccagcatta aaaaatacac cagcacaatc
      421 acttgcaaac atatatgaat ttactaatgg tatcaaggga agtggtccac aaggatttca
      481 gccaaatgtt gcagactcgc aaccaggaga taataactat tcaccattat ggaaagttaa
      541 tcttgtaaca tggaataatg acacaatgcc aagagaatta acatcagaag aagatatatt
      601 aaaagcagtt aagaacaaag agctaacaat aaaaccaaca gatataattg ttaattgtcc
      661 atttgtacaa tggaaggatg gttctttaaa agttagagaa aataagacat taactgatga
      721 atctccatat ggtggaggac aagttcttga tattgatact aaaaaaatgc aagtcacttt
      781 tgttgcacat agaggatttg ctcctgatgg ttctaccata tattacatag caactgatgc
      841 ttctgtcaag caagttgcag atgatcttgg agttgtattt gtcaataaaa ctgatccaac
      901 tctaaagtca ggctcatctt cagacctata tgtatttact aatggaataa aaggaaatgg
      961 tccaatggga taccaagcaa gtattgcatc tactaatgca ggtgatgaag catatagtcc
     1021 actatggaga attcaaactg taatatggaa agatccagct caaacacaat ttcttacttc
     1081 acttaatgaa ataacagaac atgcaaaaaa aggacatata aagactgaaa ttgctggagt
     1141 aatagttaac tgtccatttg ttgaagcgta gtttatttct ttaccttttt tattagtaga
     1201 agtgaatgtg accatggtag aaaggaaaga gtttggctta tttgcagcaa gaattgggat
     1261 ggcttttact ttctgttggc caggcattaa caaaataaac aattctgaaa gcagtaattt
     1321 tggacaatgg ttattaaatt ctatcggttt tgatccaaca acggctatac aaatagtatc
     1381 tggcatggga acacttgagg tactatttgg gatttttata ggtgtaggat tccttacacg
     1441 gccatcagca atttttatga ttataattct agtaggttct caagccatgt ttggttttat
     1501 ttatacacaa ggtccagcta tatggaaaga tccaggacta ttaggacttg ccattttatt
     1561 attattctca ggggcaggaa aatttagtat agattatttg atttcaaaga gaaccaagat
     1621 atatcaaaac aattaatatc ctcaaatttt ttttattaaa ataatagttc aaatcaacat
     1681 cttcaattga ggttgaaatt taagcatgag attttcataa tattaaaagt gagtgtagta
     1741 actcttcctg aaactaatct atttcagggt ccgaaccaac aaggaaattt ctggctcggg
     1801 caaaaatgag gaatattttt gggattcagc tgatataatt tactatacgg cgagtaaaat
     1861 acgtgcctgt acagtaagca aatattgaac tataatattt ttagcatatt ttactttata
     1921 taaggattca atttcataga attatcatgg gaccaaaatt tacgtcaaat ttgtttcatg
     1981 attttttgga gttaataatg agaggtacaa aaataaaaat aaaaacaaaa ttaaaggatt
     2041 ctgtgggatt tgaaacctta gataaagtgg gaccagttaa attaattcaa tgatattata
     2101 tcataagcat gacatagtta aaggattaaa gagaattata ggttataaaa atatcatctt
     2161 aa
//
LOCUS       DATIAS010000720         5252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2037966, whole genome shotgun sequence.
ACCESSION   DATIAS010000720 DATIAS010000000
VERSION     DATIAS010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5252
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037966"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(987..2384)
                     /locus_tag="VLA74_14475"
     CDS             complement(987..2384)
                     /locus_tag="VLA74_14475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004421 - hydroxymethylglutaryl-CoA
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006084 - acetyl-CoA metabolic process
                     [Evidence IEA];
                     GO_process: GO:0010142 - farnesyl diphosphate biosynthetic
                     process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HSF51962.1"
                     /translation="MSVGIDDMALYVPKLYVDSKDFAKARGIDPYKLENGIGIKKMAI
                     VDTNQDPACMAANACLKLMQKNDLNPNDIGRMYVATESALDESKAMNSFVIGMLEQIY
                     GEGSFEHAGGIECKFACVSGSYALYDNANWIRAEENNGRAAIVIVSDIAKYDMGSAGE
                     YTQGAGAIAMLVKENPRLVIFDPKVTSTIIKNEYDFYRPFGRETPLVNGSYSNYLYLI
                     QVKKAFDSYKEKVLRTNLFQINSDESITDKIDYFSVHLPYRKMGEKALAYLLRHEWRH
                     LPRWKKIIEEVGMEEPVPKDPRGTIESILADKEFMKADETFRRAFIKTSFFKQVFEQK
                     MSSSLEASTIIGNIYTASMYMGLRSLLEFEYKKNIDLANKRIGFGSYGSGSSAMVFSG
                     VVQEEYKEIVKDMNLEMEIGNRTKLDMAEYKRLHSNELPINESLLDHEKEFVLVKIGG
                     NTSDKAGQRDYLFCN"
     gene            complement(2521..3642)
                     /locus_tag="VLA74_14480"
     CDS             complement(2521..3642)
                     /locus_tag="VLA74_14480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CofH family radical SAM protein"
                     /protein_id="HSF51963.1"
                     /translation="MQNSLSYFVSESEIGDILNDILEGKRLNFKDCVKLIGSDDIYAI
                     GLVANLLRDNLFGKTATFINNIILNYTNVCVTYCKFCAFYRPPGHEESYTRTKLDILK
                     RISISKELFGITQILFQGGHNPNLSIEYYEDVFRDIKKYYPSISIHGLSASEIDMIAK
                     VERSSTKEILSRLKMSGLDSLPGAGAEILVDEVKSKISPLKIKSNDWLRIMNEAHDMG
                     ISSSATMMYGTVENDYDIAQHLMKICELQEKTNGFIAFIPWGFEPNKTQLQLEGLTKY
                     SPGGLKLLKMISISRIIFYGLIPHIQSSWLTNGIGMAQLALFFGADDFGGTLIGEEVV
                     SATGARSTELTSTKIIDSIQQVEFHAAERDNFYNIIRFF"
     gene            3741..4844
                     /locus_tag="VLA74_14485"
     CDS             3741..4844
                     /locus_tag="VLA74_14485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF51964.1"
                     /translation="MYSNILNTKPTIALEKVLAGEELSYNDGIQLFKENLFLLGSAAD
                     SIRKIKNGNIVTFASSYYLNYTNVCIASCPLCAFYRKGSEDDAYTLTSEQIVERARLA
                     IKQMGVTELHIVGGFHPKLGLDYYEKMIKSIKNEFPNVTIKALTPAEIFFISKLTKNS
                     VKEILNRLKSSGLDALPGGGAEIFSPEVRNRIVRGKCSGDEWLDTAKQAHEVGLKTNS
                     TMLFGHIEKPEHIVDHIIKIRDLHKKTNGFNTFIPLKFSLDNTELEKNAEIKRESSSL
                     YDLRVIAISRLLLANTLNNISVYWVALGKKIAQVALSYGGNDFVGTAFSEEIFRAAGK
                     NSGTSMEELASLAREVNRQPAQRDTFFNIIKNY"
BASE COUNT         1885 a          841 c          739 g         1787 t
ORIGIN      
        1 agactttatt gctaatatca ttgattttct gataatagca cttgtagttt ttgttgtata
       61 caagttttta tcaagatata aaattgtaga ggacaaaaca aaacctgaag gtaagtagat
      121 atttaaaaaa ttaataacat attttttaca caaatttttt ttaaataaga acgttcgtat
      181 ttttgtcttg tcatctaaac caatcttaag ggatcaagca agactaacaa gatcaaaaaa
      241 aatgtactca aaaaaaagac caataaacaa caacatttac aaagaaagaa attaccaaat
      301 cccataattt acgatccaga caaaaatcaa acaaatatac aattagtaca gcatgctgat
      361 gatagtttga gacagcatcg acaacgaact actaaggacg caatagagat tactacctat
      421 tacctagaac ttcataagaa tatgataaac atgtataatt cggtatattc tcaaatatta
      481 cacgatattt acaatttttc ttggaatgat tttactattt cgggaagatt tacaaattac
      541 ccattccaca ttcaaaatat gtatatcaat ttaattagta aggatgagtc attaaaataa
      601 taaacaatat tataactaat aatttggata catttattaa atcaatggaa cttacacaaa
      661 aattctacaa ggacataatt caaagttacc taaattatat aaaaaaaaga agtagagtaa
      721 caatctagat aacctattcc gaaaccccat tattttgttt ataaaaatat ctgcagaaaa
      781 aatgatgaaa aacaaaatga atatttcaaa gatatggaaa caatattgaa gaaattagat
      841 gaactctaag aaaatagagc tataaactac ttttaggata gattcttaat atgaaaatat
      901 catattgtaa tatagctttc tacaggtaaa gttattaaag aatgcaagag cataatatta
      961 aaaagtgtct aaattagaaa aattatttag ttacaaaaga gatagtctct ttgtccagct
     1021 ttatcagatg tatttccacc aatctttact agaacaaatt ctttctcatg atccaaaagc
     1081 gattcattga ttggtagttc attagagtga agacgtttat attctgccat atcaagttta
     1141 gtacgatttc ctatttccat ttctagattc atgtctttta ctatttcttt atattcttct
     1201 tggaccacac cactgaaaac cattgcacta cttccacttc catatgaacc aaatcctatt
     1261 ctcttatttg ctaaatcaat atttttctta tattcaaatt caagtagact tcgtaatccc
     1321 atgtacatag atgcagtata tatatttcct attattgtag atgcttcaag agaactagac
     1381 atcttttgct cgaatacctg tttaaagaaa cttgttttta taaaggcacg tctgaaggtt
     1441 tcatctgctt tcataaattc tttatcggct agaatagatt caattgttcc tcttggatcc
     1501 tttggaactg gctcctccat tccaacttct tcaattattt ttttccatct tggaagatgt
     1561 ctccattcat gtcgtaaaag ataagccaat gctttttcac ccattttcct ataaggcaga
     1621 tgaacgctaa aataatcaat tttatctgtt attgattcat cactatttat ttggaacaaa
     1681 ttagttctta aaactttttc cttataacta tcaaaggcct ttttgacttg aattagatac
     1741 aaataattag aataactacc attaacaaga ggagtttctc ttccaaacgg tcggtaaaaa
     1801 tcatactcat ttttaataat cgtagaagta actttgggat cgaaaataac taatctagga
     1861 ttttctttga caagcattgc tattgcacct gccccttgag tatattctcc tgcagaaccc
     1921 atatcatact ttgctatatc gcttactatg acaatggctg cacgtccgtt attttcctcg
     1981 gccctgatcc aattagcatt atcatataga gcataggaac cactcacaca agcaaattta
     2041 cattctattc cgccggcatg ttcaaatgag ccttcaccat aaatttgttc gagcatacca
     2101 atcacgaagg aattcattgc tttggattca tccagagctg actcagtagc tacatacatt
     2161 cttcctatat cgtttggatt caagtcattt ttctgcatta gttttaaaca agcattagca
     2221 gccatacatg ctggatcctg attagtatca acaatggcca ttttctttat acctatccca
     2281 ttttctaatt tataagggtc aattcctctt gccttcgcaa aatcttttga atcgacatat
     2341 agcttgggaa cataaagggc catatcgtca ataccaacag acatatcaag ctctatctta
     2401 cgaattagac atttaaacgt acttactatt tatagagaat tttgtaatta ttaatttatt
     2461 ttataaaaaa attataaagt catacaattt ttagataaaa tatcaatttc aaaaattata
     2521 ctaaaaaaaa cgtataatat tataaaagtt atctcgttca gcagcatgaa attcaacttg
     2581 ttgaatggaa tcaattatct tggtcgaagt tagctcggta gaacgtgctc cagtggcact
     2641 tacaacttct tcaccaatta aggtaccccc aaaatcatct gctccaaaaa atagtgctaa
     2701 ctgtgccata cctattccat ttgttaacca tgatgactga atatgaggaa ttaaaccata
     2761 aaagattatt cttgagatag atatcatctt taacaatttt aaccctccag gtgaatattt
     2821 ggtcaatcct tccaattgca attgagtttt attaggttca aatccccaag gaatgaaagc
     2881 tataaaacca ttagttttct cttgtagttc acatattttc atcaagtgtt gagcaatatc
     2941 ataatcattt tctacagttc catacatcat agttgcagaa gaactaattc ccatatcatg
     3001 tgcctcattc attatcctga gccaatcatt acttttgatt ttaagagggc ttattttaga
     3061 ctttacttca tctacaagaa tttccgctcc tgcacctgga agagaatcta aacctgacat
     3121 ctttaatcta gataatattt cctttgtact acttcgttca acttttgcta tcatatctat
     3181 ttcagaggca gaaagaccat ggattgaaat cgatggataa tactttttaa tatctctgaa
     3241 aacatcttcg taatattcta tcgacaaatt tggattgtgt ccaccttgaa aaagtatttg
     3301 agttattccg aacagttctt tggagatgga aattcttttt aatatatcta attttgtacg
     3361 agtatatgat tcttcatgtc caggtggtct gtaaaaagca caaaatttac agtaagttac
     3421 acaaacattg gtgtagttta gaataatatt atttataaaa gtagcagttt tcccaaaaag
     3481 attatctctt aatagattag ctaccaaccc gattgcataa atatcatcag aacctataag
     3541 ttttacacaa tctttgaaat taagtcgttt tccttccaaa atatcattta aaatatctcc
     3601 tatttctgat tcagagacaa agtaagataa gctattttgc aattatgaac tatattttct
     3661 taattctatt tattcgttac aagactaaaa tttgaaagaa gttatatatc aataaataat
     3721 tagattagat ctatcaaaac ttgtatagta atattttaaa tactaaacca actatcgctt
     3781 tagaaaaggt tttagctgga gaagaattat cctataacga tggtattcag ttatttaaag
     3841 aaaacttgtt cttattgggt tcagctgctg atagtatccg aaagataaaa aatgggaata
     3901 ttgttacatt tgcatcatca tattatctaa actatactaa tgtttgtatt gcaagctgtc
     3961 ccctatgtgc attttataga aagggaagtg aggatgatgc gtatactctt acaagtgaac
     4021 agatcgttga acgggctaga ctagctatta aacaaatggg agtaactgag ttacatatag
     4081 ttggaggatt tcacccaaaa cttggacttg attattacga aaaaatgata aaaagtatta
     4141 aaaatgaatt tcctaatgtc acaattaaag cattaacgcc tgcagaaatt ttttttatat
     4201 ctaaattaac aaaaaattca gttaaggaaa tactaaatag attaaaaagt tctggtttgg
     4261 atgcacttcc tggtggggga gcagaaattt tcagtcctga agttaggaat agaattgtaa
     4321 gagggaaatg ttcaggagac gagtggttag ataccgctaa acaggctcat gaagttgggt
     4381 taaaaactaa ttccaccatg ctttttggtc atatcgaaaa accagaacat attgttgatc
     4441 atattattaa aataagagat ctacataaaa aaaccaatgg atttaacacc tttattccgt
     4501 tgaaatttag tttagataat actgaattgg aaaaaaatgc agaaattaaa agagaaagtt
     4561 catctctata tgatcttagg gttattgcaa tatcaagact tttattagca aatactttaa
     4621 acaatatttc tgtttattgg gtagcattag gaaaaaaaat agctcaagtt gcattatcat
     4681 atggtggaaa tgattttgtt ggtactgcat tttcagaaga aatctttcgt gcagccggaa
     4741 agaatagtgg tacttctatg gaagaattag cgagtttggc tagagaggta aatagacaac
     4801 cagctcagag agatacattt tttaatatta taaagaatta ttaacttaat attttattaa
     4861 acaataacaa agattgatgg taagttacag tttttttata tagcttgcat attattaata
     4921 cgagaggaga atagacaaaa aatgaatgtt caaatataca ttgatccaat ctttggatct
     4981 agtttttgtg aaactttaaa aaatagagaa tttatataag caaaagccga aactaattac
     5041 attaatgata aattcttatt cagtaatatt cagattatga tctgtctcga ttttatgata
     5101 actaaaagaa cattttgcct catgcaaaat acacagagaa tggcgataaa atatgttttt
     5161 caatagctag atcaaagacc ttttcaattg cttgttttcc cttatccccc atatcaattg
     5221 taaggtcatt tacgtacata ttaacaaatt tt
//
LOCUS       DATIAS010000721         2303 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_810273, whole genome shotgun sequence.
ACCESSION   DATIAS010000721 DATIAS010000000
VERSION     DATIAS010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_810273"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VLA74_14490"
     CDS             complement(<1..459)
                     /locus_tag="VLA74_14490"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSF51965.1"
                     /translation="MDNNNDNRIKKSNDFSLNPFIVTSMALWQQSATMWMEIYKEFAA
                     RSQKISESWSDALWKTWTSEENLQSRENVSLQGHVDNNNDTSKNNKKKMRALILQGGG
                     SVGAFQAGAFKALYEKITREDKENGNEGRPLFDIIAGTSIGAINAAVLVSH"
     gene            complement(801..1679)
                     /locus_tag="VLA74_14495"
     CDS             complement(801..1679)
                     /locus_tag="VLA74_14495"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HSF51966.1"
                     /translation="MVRSNDNDENNKFIDHLNEVVSIENAAIERLERRIQETAIQDSK
                     KILQQHLQDEKEQQRRLIDLISTYGKKPTDSKADLISLHSLTNEARDKMKKDNVDTGN
                     DTNTTKISSTIHDSNNINNTMMTPEEAEILNTKEDALIKNNEISAYKTILKIDKGVIG
                     KDAIDILKQNLQEKESMYDRIKSSESKMLNEIGENNDDHNESFKVGSAVADMLTSQWN
                     SQENPSKVYLFNRRVHHGAIGALLGLSSLYKKNPLVTGILSGLGAGLQKDDSKDSKEW
                     FLFRKKEDDREENKNH"
BASE COUNT          720 a          353 c          304 g          926 t
ORIGIN      
        1 atgacttact aatacagcag catttattgc accaattgaa gtaccagcaa taatgtcaaa
       61 taatggcctt ccttcatttc cattttcttt gtcttctctt gtaatctttt cgtataatgc
      121 tttgaaagca ccagcttgaa aagctccaac tgatcctcct ccttgtagaa taagagccct
      181 cattttcttt ttgttattct tgcttgtatc attattatta tctacatgac cctgtaatga
      241 tacattttct ctactttgaa gattttcttc gcttgtccat gtcttccaaa gagcatctga
      301 ccaggattca gatattttct gtgaacgtgc agcaaattct ttatatatct ccatccacat
      361 tgtggcagat tgttgccata aagccatact cgtcacaata aagggattaa gtgagaagtc
      421 attggatttt ttaattctgt tatcattatt attatccatt cattaataag gtggtatata
      481 ttgcctatta acagttgtaa tcatcaataa gcgagatcat agtttaattt agataaacag
      541 aagataagcc ctatacataa atttctgggt gggaaaaatg agtcaaattg tttcatatcc
      601 cattggccac attgtgataa tagtcctcta attggattca ctagaaaaat aaaagaaaag
      661 gtgaatcaaa aaatagaaaa tttaggagaa tctaatgcat actaataatt tgtatgttta
      721 gtaaggttac aaataaaaaa gagattcaca agtaacaaga gattattatt gagacgattt
      781 taacaaattg ctattatatg ttaatgattc ttattttctt ctctatcatc ttcttttttt
      841 ctaaataaga accattcttt ggaatcttta gaatcatctt tttgtagacc tgcacccaaa
      901 cctgatagaa taccagtaac aagtggattt tttttatata aagaagataa acctagtaaa
      961 gcaccaattg ctccatgatg gactcgtcta ttgaataaat atactttaga tggattttct
     1021 tgagaattcc attgagatgt caacatatca gcaacggcag atcctacctt aaatgattca
     1081 ttatgatcat cattattttc tcctatctca ttaagcattt tagattcaga actttttatt
     1141 ctatcataca ttgattcttt ttcttgtaaa ttttgtttta gaatatctat tgcatcttta
     1201 ccaattacac ctttatctat ttttaatatt gttttataag ctgatatttc attatttttt
     1261 atcagtgcat cttcttttgt atttagtatc tcggcttctt caggtgtcat catagtgttg
     1321 ttgatattat tactgtcatg gattgtactg gatatttttg ttgtgtttgt atcattacca
     1381 gtatcaacat tatctttttt cattttatct cttgcttcgt tagttaatga atgcaaagaa
     1441 atgagatctg cttttgaatc tgttggcttt ttaccataag tagagatcag atctatcaat
     1501 cttctttgtt gttccttttc atcctgtaga tgctgttgta atatcttttt tgagtcttgt
     1561 atagcggttt cctgtattct tctttctaat cgttctattg cagcattttc aattgataca
     1621 acttcattta aatgatctat aaatttatta ttttcatcat tatcgttaga tctaaccata
     1681 taatggtatg gaaaatattt aacttaagga tttcttgaaa catgaaacaa atctttaaaa
     1741 tatattatct ctgaacatct aataatatag atacaaaaat gattttttaa acccactaaa
     1801 tatgatcttc gaattctctt tttaggtcaa atttggttca catcccattg gccacattga
     1861 actcggttcc aatcatatca tttatagatt tcatgaagca acattgtatt ctcgaattac
     1921 agatttttca cttatgtcaa ggttaggtta ttttaatatt cgataaatta taataaaaaa
     1981 aaatacttgg aagaactata gcttttccaa gttttggatt caattattaa ttatgatttc
     2041 attaattaaa ttttattagt attattgaac actgaaacta tgaccattca actcccttaa
     2101 gtaattattt ttctcggttt ctctattttt aaaaaattat tttaattgat aaaaaaataa
     2161 cttctgtatg agtctctaat ggataattgg cattgatcta atttattgac cttggttgtt
     2221 ttaataagtt ttatagatgg ttataatttt attattactt caggtataag aattagttat
     2281 tgatatacct taaggtaaca tta
//
LOCUS       DATIAS010000722         2338 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1491777, whole genome shotgun sequence.
ACCESSION   DATIAS010000722 DATIAS010000000
VERSION     DATIAS010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491777"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..1427)
                     /locus_tag="VLA74_14500"
     CDS             complement(111..1427)
                     /locus_tag="VLA74_14500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51967.1"
                     /translation="MKLFAPPANINDFDENSQLSIKWNDFLFNRFTEEIIALENTLED
                     DRSDMISFFNPQDPPEGNQLYRLVTWLGFPNTQIIAKGLEEALKASEDPIEVKRYAKN
                     GNNYEEISIYVRAFQDEYLEWAVHKDQKTGKIKEIIFTCEGPEYWDTISQDKDLLLKL
                     YHKYVSEDVQESDLFHTTDIYRRIQNGESNDMYRLEAKKGDYNIWNKWNISHAIHLHQ
                     PNNSLAAEINIAARATILRKNDDQLITDAHSLICCSGYGGPNRNSDPTIGEAVNSQVR
                     SKRWVSLREPIGIYISDIDSSSFKKPGGSLILDFKQRYWTVIRGDEENKMILRAVLRV
                     PEGELIENRQLLLGDLLIDGEPLRYAGQVANTITVGLFATAVQRSNGRSKILPCPRKC
                     CQNVNTPALDNIIYADEECKETEELDVALTKIQEIPYEILPSRTRY"
     gene            complement(2042..>2338)
                     /locus_tag="VLA74_14505"
     CDS             complement(2042..>2338)
                     /locus_tag="VLA74_14505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51968.1"
                     /translation="GYFLKIIENGQMRLFELSTEQISEMYQIISRFINGFDAYHYNDF
                     NSADTDYTLLVSIHSDDPMFPNQGQQYYNWQDAKHIPKGVEFLLEFFNKFNYKG"
BASE COUNT          767 a          376 c          309 g          886 t
ORIGIN      
        1 attattaata gtcagaccta tcaaaagtac atgatcttta ttaaaaccag gaataatatt
       61 tccttgtatt tcatccacat ctaatttggg ttctaactgc tctgccaatc ttaatacctt
      121 gttcttgaag gaagaatttc atatggtatt tcttgtatct ttgttaaagc gacatccaat
      181 tcctctgttt ccttacattc ttcatcagca tatattatat tatcgagagc aggagtattg
      241 acattttgac aacattttct aggacaaggc aatatctttg atcttccatt agatctctgt
      301 actgccgtag caaatagacc tactgtaatt gtgtttgcaa cttgacctgc atatcttaaa
      361 ggttctccat ctattaataa atctcctaat aataattgtc tattttcaat taattctcct
      421 tcaggcaccc ttaaaactgc tctgagaatc attttatttt cttcatctcc tcttattaca
      481 gtccaataac gctgtttgaa atccaaaatc aaagagccac caggtttttt aaaactagat
      541 gaatctatat cagaaatata aattccaata ggttctctta aactcaccca tcttttactt
      601 cttacttgag aatttacagc ttcacctata gttggatcgc tatttctatt tgggcctcca
      661 tatccagaac aacatattaa agaatgagca tccgtaatga gttgatcatc attttttcga
      721 agtattgttg ctctagctgc gatattgatt tctgctgcta atgaattatt aggttgatgc
      781 agatgaattg catgggatat gttccattta ttccatatat tataatcacc ttttttggct
      841 tctagacgat acatatcatt gctttcacca ttttgaattc ttctgtaaat atctgttgta
      901 tgaaataaat cagattcttg aacatcttcg gaaacatatt tatggtataa ttttaatagt
      961 aaatctttat cttgggatat tgtatcccag tattccggac cttcgcaggt aaatataatt
     1021 tctttgattt ttccagtttt ttgatcttta tgcactgccc attctaagta ttcgtcttga
     1081 aaagctctca catatataga aatttcctca taattattcc catttttagc atatcttttt
     1141 acttcaattg gatcttctga ggctttcaaa gcttcttcta atcctttagc aattatctga
     1201 gtgttaggaa atcctagcca tgtaactaag cgatataatt gattaccttc aggaggatct
     1261 tgaggattaa aaaaagaaat catgtctgat ctatcatcct ctaatgtatt ttctaaagct
     1321 atgatttctt ctgtaaatct attaaataaa aaatcattcc atttaatact aagctgacta
     1381 ttttcatcaa aatcattgat gtttgcagga ggtgcaaata gtttcatttt aaagatagaa
     1441 atttgaaact atataagttt tattgttacc gtttatatat catattttta gatcggtatt
     1501 ttatctattc tactaggtct atttcttttt tctaggaaga tatcttttta gtattatttg
     1561 tctaatataa gatgaaatat ttaccacata aagatttcaa aatattaact tcaccaatac
     1621 aatagcaaac taataaagag aactcaagca acgtaagtgg agaagttacg gagatacacc
     1681 atcgtcattt atccaatcat ctttaattga aaaataggaa tcttcaattt ataattatta
     1741 aaattaagat tttttaccta ctatataata taatttaatt catatctgct cagtcctatt
     1801 attaactaaa tgggttcaat aactaaaatc caagcttaga gggcttcgag tatgacatgt
     1861 aattgggatc ggtaaacatg tatttattaa tttagtaact tatttgaata ttcattaaac
     1921 aatttctaat aggatataaa aaatgaaaaa gggaatcagt gggatttgaa cccttcaata
     1981 aagtgggatc agttatttta attcaattgt gcatagaatg taatgaatga aataataaaa
     2041 actatccttt ataattaaat ttattgaaaa attctaacaa aaactcaaca ccttttggga
     2101 tatgtttagc atcttgccaa ttataatatt gttgtccttg atttggaaac attggatcat
     2161 ctgaatgaat acttactaat aaggtataat ctgtatcagc agaattaaag tcgttgtaat
     2221 gatatgcatc aaatccgtta ataaatctac ttataatttg atacatttca gagatttgtt
     2281 ctgttgaaag ttcaaatagt ctcatttgac cattttcaat tattttaaga aaataacc
//
LOCUS       DATIAS010000723         2768 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1221230, whole genome shotgun sequence.
ACCESSION   DATIAS010000723 DATIAS010000000
VERSION     DATIAS010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221230"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..861)
                     /locus_tag="VLA74_14510"
     CDS             complement(<1..861)
                     /locus_tag="VLA74_14510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51969.1"
                     /translation="MSVFLKDRVWVMLSEISKRGVYPLHGYKLGIFRLPVNLTEETTI
                     NNIYNELKKTSFKLDRYADRIYVTHSWREEDKDDFTGKILSISLDITVEIVTGEVIDL
                     IYQVKPIERFGDPYWIKNYRQKADLKAKMVIDTILRNTSIGDKLIAHYQKIEKLSLEK
                     AINKLIELTPLAVNPITRNVNPPPPPAAASITSQEISSTSPRPSVTPPLTAQTIPNIP
                     SGSPNTTISLTGSGTDHSKAEGPIDTTFKTKRQKAGTFKGISVWGPVDPPGQLGIWGD
                     SVCVDFDICIG"
     gene            1503..1596
                     /locus_tag="VLA74_14515"
     tRNA            join(1503..1539,1560..1596)
                     /locus_tag="VLA74_14515"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1537..1539,aa:Ala,seq:tgc)
     gene            complement(1617..2552)
                     /locus_tag="VLA74_14520"
     CDS             complement(1617..2552)
                     /locus_tag="VLA74_14520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HSF51970.1"
                     /translation="MHVQGNILICDPISSVGITILKKAGLNVMDKPSITKSELISEVE
                     KYDVIVVRSRTKITREIISRAKNTKIIARVGVGLDNIDIDSAREFHIEVINSPESAIN
                     AVAELVIGLMLSMARSLILADKEMKKGNWIKKELNGIELKGKYLGIVGVGNIGRNLAR
                     IAKALRMNIIGYDIYPIKRDFINEVGMITTDFNTLIASSDFISCHVPATPETNHMFNE
                     STFSKMKPTAFFINASRGEIVDENSLYDALITKKIAGAALDVFEKEPPPNKKLIELSN
                     VICTPHIGSQTKESQDLASNVIAEKIIQKLLEQNS"
BASE COUNT          895 a          446 c          380 g         1047 t
ORIGIN      
        1 acctatacaa atatcaaaat ctacacagac actgtctccc cagataccca attgtcctgg
       61 aggatcaaca ggtccccaga cactaatacc tttgaatgtt cctgcttttt gtcttttggt
      121 tttaaaggta gtatcaatag gaccttcggc tttggaatga tcagttccac tgccagtaag
      181 agaaatagtg gtattaggac tgccagaagg gatatttggt atcgtctgag ctgttagtgg
      241 cggagtaaca gaaggtctag gcgaagtaga agatatttct tgagaggtga ttgatgcagc
      301 tgctggagga ggaggaggat ttacatttct agttatagga ttaacggcca aaggagttaa
      361 ttctatgagt ttattaatag ctttttcaag agatagtttt tctatttttt gatagtgagc
      421 aatcagttta tctccaatcg atgtatttcg taatatcgta tcaatcacca tttttgcctt
      481 caaatctgct ttttgtctat agttttttat ccaatacgga tcgccaaacc tttcaatagg
      541 tttaacttga taaattagat caataacttc tcctgttaca atttcaacag ttatatcaag
      601 tgagattgat aatattttac ctgtaaaatc atctttatct tcttctctcc aagaatgagt
      661 gacatagata cgatcagcat atctatcaag tttaaaactt gttttcttta attcattata
      721 gatattatta attgtcgttt cttctgtcaa atttaccggc aatctaaata tccctaattt
      781 ataaccatga agaggatata caccacgttt cgaaatttca gaaagcatta cccaaactct
      841 atcctttaag aaaacagaca tacttctatt acgatgttaa aaacctaaaa gggtttcgtt
      901 tttagtattc taccatcaaa aatataattc tttgtataaa gagaataatt ctgttatttt
      961 tgtaaatatt tacatatatc atgaataaaa cctggttatt ttttatgcat ttataaagac
     1021 attacataat tcatttattg tcaatcataa tacaaaaaaa tttattcagt gtaaattcat
     1081 cgcaagatat gtcaagttat ctattattac ttctttcaat tttacaataa aaaaatacta
     1141 tctttatatt tattttcttt taataactaa aagttttggg ttatgcttta cttaaataat
     1201 actctagtat tgcttttaat tttatgttct actctttatt ataaatcata catattcaag
     1261 gtagagaaaa atttttacat ttttccaaaa tttctatctt cctactttta ttaaaaaaat
     1321 ttttatgtgt ccataataag tattccaaac agaaattgca atacttctta atttttcaca
     1381 tgatctattt ctacatatta ttattaaatc tggttaatag atcgaatcat tatgaaactt
     1441 tgaatatagc caaaaaaatt aattaaacat ttaaattata agaactttag gttttgagta
     1501 aagggccggt agtttagcct ggtagaatac ctgccttgca tgccaccaag acagaggaaa
     1561 cgtaggtggt cgtgggttca aatcccaccc ggtccataca atttagggtt taataactaa
     1621 ctattttgtt ctaataactt ttggataatt ttctctgcta ttacatttga agctaaatct
     1681 tgagattctt tagtttgaga gccaatatga ggagtgcaaa ttacatttga taattcaatc
     1741 aattttttat taggtggtgg ttctttttca aagacatcca atgctgctcc agcaattttc
     1801 tttgttatta gagcatcata tagtgaattt tcatccacta tttcccccct tgatgcattt
     1861 ataaaaaagg cagtaggctt catttttgaa aatgtagatt cattgaacat atgattcgtc
     1921 tctggagttg ctggaacatg gcaggagata aaatcagaac tcgctatcaa tgtattaaag
     1981 tctgttgtaa tcattccaac ttcatttata aaatcacgtt tgattggata aatatcataa
     2041 cctataatat tcatacgtag agctttagca attcttgcta agtttctacc tatattgcct
     2101 actcctacaa ttcctaaata ctttcccttt aattcaatac catttagttc cttctttatc
     2161 caatttcctt ttttcatttc tttatctgcc aaaattaaac ttctagccat ggaaagcatt
     2221 aaaccaataa ctaattctgc aacggcattg attgcagatt ctggagaatt aatcacttca
     2281 atatggaatt ctctagcaga gtcaatatca atattgtcta atccgactcc aacccttgct
     2341 attattttag tattttttgc tcttgaaata atttcacgag taattttggt tcgacttctt
     2401 acgacaatta catcgtactt ttctacttct gaaattaatt ctgatttagt tattgatggt
     2461 ttatccataa cattaagacc ggcttttttt aaaatggtta ttccaacaga tgaaattgga
     2521 tcacagatta aaatatttcc ttgtacatgc acagataaaa tttttttaaa tacaaatata
     2581 attattactt tacaaatgaa aaaattattc tgtgatattt agaatataaa taaaatcttt
     2641 attctacttt tttgaaatag tttctcctgt taaatgatca atgtaatagg ttttatttat
     2701 tatcggaaaa taaatttccc atccaaaatg atttccagtt gttaccgttg gagaagtttt
     2761 tcctatat
//
LOCUS       DATIAS010000724         2748 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1626816, whole genome shotgun sequence.
ACCESSION   DATIAS010000724 DATIAS010000000
VERSION     DATIAS010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2748
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626816"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..639)
                     /locus_tag="VLA74_14525"
                     /pseudo
     CDS             complement(159..639)
                     /locus_tag="VLA74_14525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611171.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            complement(920..1564)
                     /locus_tag="VLA74_14530"
     CDS             complement(920..1564)
                     /locus_tag="VLA74_14530"
                     /inference="COORDINATES: protein motif:HMM:NF018696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HSF51971.1"
                     /translation="MSSSNDKKMNFLEMFQDYEEYHKEVNTGKKFRAELIKGWIEKNS
                     TILDVGIGDGLIAEYLMNELNVKIQGLDISENACKKAKQKGISAEVRNINYGLTLRDD
                     EIYDYILLMEVIEHTVQPEKVVMDAVRHAKKGVIVTIPNSGYIKWRIQLLRGYSPRQS
                     YTHLHFWSIKDFEIWCKLLNIKIKSFTTILPKYTSVFKNLLAWQQCWLLYPKRE"
     gene            complement(2278..2544)
                     /locus_tag="VLA74_14535"
     CDS             complement(2278..2544)
                     /locus_tag="VLA74_14535"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF51972.1"
                     /translation="MYMGRIKKDGNKKINWIMIQAANTASRTDSDRLKKYYKKIAKRH
                     GHNVAITHVANKMIRIIWAMLTYKQLYNERKNELYETKLKRIQK"
     gene            complement(2526..>2748)
                     /locus_tag="VLA74_14540"
     CDS             complement(2526..>2748)
                     /locus_tag="VLA74_14540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51973.1"
                     /translation="EIRQIEKQISSEASKNENVKILMSMTGIDYFSVMLINSEIGDIS
                     RFSTAENWYHGVDWVQQYINLVTRCTWVE"
BASE COUNT          832 a          460 c          377 g         1079 t
ORIGIN      
        1 tcttgcaaac gtgcatggta accatatttc tcaagttggt atacttcagg atagtcataa
       61 cccttgtcaa gacagatatg ttgttgttgg gtatttgccg tagacgatga tggtggtggt
      121 agtctgcaaa ccattatact ctgaagagtt gcttttgtca tcttcatata tcatgtctat
      181 tagcaccatc tacagtaatt ccaagaggaa taccttgtcc atccacaaga aggctgcgtt
      241 tggtacctgt tttacttctt ctatctgttg gatttggttc tgtacttttt cttccaagag
      301 gtgcttttgt tattgcacta tccattgatt gccatttcca gttgatgcta actttttcat
      361 cgtataattt caaatcgtca atccacatac gtttgaatac gccatcttgt ctccattcct
      421 gaaatctgtc atgtatagta ctggatgcat caagactttg tggtaatgct ttccactgac
      481 atccagtacg tgctatgtag aagatatagc attcattgcc tttctatcat ccattcttgg
      541 atgacctgtt ttcttttttc ttttgggttt atgtacaaga ggggaaattt gattccataa
      601 tgcatctggt atttcataag atgaatctat tccagagatt tcagatatca aactaatctc
      661 gtgatatata gtgaatagag acatttagct ttaccgagta aatctattgt atcataaata
      721 ctataaacta cttttcggat aggctcttag catctatggt taaattacaa taaattagat
      781 tgtgtatcca ggctttgtta ccttgatcta aaagaaatct gaaaaatttt attattactg
      841 atctgagaac ataattatat aataaaaatt ttgatattta atctaataga accgatttac
      901 catgaagttt aataaatcat tactctcttt taggatacaa taaccaacat tgttgccatg
      961 ctaaaagatt cttaaagact gaagtatatt taggtaatat tgttgtaaac gattttattt
     1021 ttatatttaa aagtttacac caaatttcaa aatctttaat tgaccaaaaa tgtagatgtg
     1081 tataagattg tcttggtgaa tagcctctta ataattgaat tctccattta atatatccgc
     1141 tgtttggtat tgttacaata acaccttttt ttgcatgtct tacagcatcc atcacaactt
     1201 tctctggttg aactgtatgc tctattactt ccatcaataa tatatagtca taaatttcat
     1261 catctcttaa ggttaatcca taattgatat tacggacctc tgcgctgatt cctttttgtt
     1321 ttgctttttt acatgcattt tctgaaatat ccagaccctg aattttaaca tttaattcgt
     1381 tcataagata ttctgctatt aagccatctc caataccaac atctaatatg gttgaatttt
     1441 tttcaatcca acctttaatt agttcggcgc gaaatttctt tcctgtatta acttctttgt
     1501 gatattcttc ataatcttga aacatttcaa gaaaattcat ttttttatca tttgaagaac
     1561 tcaaaatatc ccgacaaatt agcttgaaat agtataagag acctgctctt ttaatttcat
     1621 attttatttg tgttgacatc aatattgtgt ttattatttc aatatttatt ttatatcttc
     1681 aattcttgtc ttttatattt tatttctcta atatgtatta tcccatacat ctgttatacc
     1741 cttttattct acaaaggtaa gcaatgctgt tacactagat gcagtaatga agacgatcgc
     1801 ataaaaatag gacgatggtt tatcagacgt aaattagagg aatggaaagt aactgatatc
     1861 tgcaaaacaa tcaagatttc cagaaccatt aattgttcct gtaaccagta aaattgctag
     1921 aaatattatg ctaattgttt ttcctgatgt taatttatcc agtattcatt agtaccaaat
     1981 atgattatat ctgaaatatg atagataaaa aaagattttt aaaaaatgaa aattagatag
     2041 actattcttt aaaaaaataa cgataataag ataaaaatag aaaaatacta ctaaaagcat
     2101 agctgtataa ttggttccaa aatataacta ttaaataatt acatcatgaa ttggaataaa
     2161 aattttagtc aggaatctat gtaaaagtct cctctagttc tattcttata tcactactgc
     2221 tgtgccattt gatactttgc ctgtctgtat aatacagtaa taatgtatca tatgatctta
     2281 cttctggatc ctcttaagtt ttgtctcata tagttcattt ttcctttcat tgtatagttg
     2341 tttgtatgtt agcatagccc agattatcct tatcatcttg tttgctacat gagttattgc
     2401 tacattatgt ccatgtcttt ttgctatctt tttataatat ttctttagtc tatcactgtc
     2461 tgttcttgat gctgtatttg cagcctgtat cataatccag tttatctttt tgtttccatc
     2521 tttttttatt ctacccatgt acatcgtgtt accagattga tatactgttg gacccaatcc
     2581 acaccatgat accagttttc tgctgtactg aatctagata tatctcctat ctcagaatta
     2641 atgagcatta cagaaaaata gtctattcca gtcatactca tcaatatttt tacattttca
     2701 ttttttgatg cttctgaaga tatctgcttt tcaatctgtc tgatttcg
//
LOCUS       DATIAS010000725         5288 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1491858, whole genome shotgun sequence.
ACCESSION   DATIAS010000725 DATIAS010000000
VERSION     DATIAS010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5288
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491858"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..237)
                     /locus_tag="VLA74_14545"
     CDS             complement(100..237)
                     /locus_tag="VLA74_14545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51974.1"
                     /translation="MAIEKQLYEANLQQIFHMLLSNKTNEQIASELKSIVIFCLVNLV
                     K"
     gene            complement(537..845)
                     /gene="priX"
                     /locus_tag="VLA74_14550"
     CDS             complement(537..845)
                     /gene="priX"
                     /locus_tag="VLA74_14550"
                     /inference="COORDINATES: protein motif:HMM:NF033412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase noncatalytic subunit PriX"
                     /protein_id="HSF51975.1"
                     /translation="MEWIEKILLHPIEDGRKKVVSLILAPYLILVKKLSYEESFQIIN
                     KWLKKCDLLRKLDFNVRTVINTALATAYKKQILPMSIITMKTNYKDLYFLIEQKERKK
                     "
     gene            complement(912..1691)
                     /locus_tag="VLA74_14555"
     CDS             complement(912..1691)
                     /locus_tag="VLA74_14555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51976.1"
                     /translation="MTLQISTTNSTTIPEIEKIVGLDFIINHFDQDRQQLFPRKIQTS
                     KSEGRQIEVFSKQEALRYFKESSFLDCKINGFPSYTEYKGIQRYPPDLIFIDIDRSNF
                     KDDKSFENALSKTEKNIKEKLNGAVPTVNNSGNGYHIIQPIECPIVLEQIEQFQKYKN
                     EFFVSQEFLRFAENFLSNGKSDPGHNPSFKSCQIRVPGSINGKCLENREKRLSDNFKV
                     KTLQKWSGYRPPITREFIEDFRTYLEQKLTEQENSNNNNNN"
     gene            complement(1696..4149)
                     /locus_tag="VLA74_14560"
     CDS             complement(1696..4149)
                     /locus_tag="VLA74_14560"
                     /inference="COORDINATES: protein motif:HMM:NF012704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSF51977.1"
                     /translation="MSISNNNQFEIPLKLSKILEESGTIQKFVIDPNDKYVKLRLNSK
                     YNPVISLDVSTEVIKEKDGWTRFTNKFRNELKPYKIDKNHENWIVSNVTDNGELIRSI
                     ARSTTNDNHHNNSATNSCNQQQQNDLGDVISDQEEKSNTENNNEKEIIKIVSVSQALR
                     MHSGKVNVKGTIIGISKLYKMISKISLYCDTCSKDNEYNFNSFPISNTIGFSRRCKSC
                     TRKIKAIQDDTISDIEHKNAVKIELQDIENFNDMDRLSVILFDKDTEDVTAGDTVVVN
                     GEIHIINEINNKKQIPYLYTSSIIYLNKDNLILTKLDVEAIKKLVKINRNNKIIDQLV
                     SMFDPSVVGYEYVKKGLLMSAVNTSEITSKKEKIHSVLIGDPGLAKSQLLKRTTQLIP
                     NSNYVSAQNTSGKRITAIIDKTDENLFLRLGSIPQARGAISGLNELGRMSLEDQGHIL
                     DVMQEEEFTKSAYGFTTKIPSPTTIIASANPVNNSKWKDNDKIDLSEFPLLTPLIDRF
                     DLKFPFRDRKDPEEIKIFGKKYSETLTKLEQGLLPDYTVMLIKYLEYARQLKPIISQE
                     AKTMLEDFYINVKIKGFGSDRVLPSLRKIAKAIARLKLKDIVDEYDAKEAMEYYNVML
                     LNFQKQVIISESPPEIVYNECVSSLKQQKNFGGIAFEDMLKEVCKNNEQCADYLEYPR
                     KSLQIKNNRKTRKICYKLLNNSHIKKVNEHPIILKWFDDNNNDKDNDSVGDLGDLGDI
                     DKTLNEKNFDKKTEFFNENGQAPVSPTSLTSPRNNEDQKDLEFVKRVQFHPKGEIHEV
                     SNELYKKLKQEEAERGAEI"
     gene            complement(4164..4511)
                     /locus_tag="VLA74_14565"
     CDS             complement(4164..4511)
                     /locus_tag="VLA74_14565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51978.1"
                     /translation="MKPGKVGRSTINLPPQSQARDDKMNYKNNNKKRSNKGLCCPFAC
                     PNCQSLGRDLVKSKYEIINILSDTGDSIFSPMQERYHEYDEDHRSIIRNTGGKVFLSA
                     DLMVDSLFQKFKK"
     gene            complement(4611..4796)
                     /locus_tag="VLA74_14570"
     CDS             complement(4611..4796)
                     /locus_tag="VLA74_14570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51979.1"
                     /translation="MFEIITIPEKQGLKMNCHRCGHDWIYTGQNLFFCSCPKCKTTIT
                     IMSKRKKSREDDTNENI"
     gene            4866..>5288
                     /locus_tag="VLA74_14575"
     CDS             4866..>5288
                     /locus_tag="VLA74_14575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51980.1"
                     /translation="MRTRNNNNGYKIIDNIYESNSNGTGFRQLMRKTGLYQKALSLWL
                     KYLIIDLNFIKIDSKGRYHLTENAIKKYTTNTLIIPPDPRSKKVEKNKIKKQYITKKF
                     DKNYAEIIILILCLAVFGVNKYRLGSGLGSSVYSDPINK"
BASE COUNT         1599 a          807 c          701 g         2181 t
ORIGIN      
        1 tgcttatttc tctgaggtaa atattccaca caacatgaac aacattatat agtaagctaa
       61 agcagttgtt ataaaattca tttgtcaaat taattattat tattttacaa gattgactag
      121 acagaatatt acaatgctct taagttctga tgctatctgc tcatttgttt tgtttgataa
      181 taacatatga aatatttgct gcaaattcgc ttcatacaac tgtttttcta tagccatttt
      241 ttattttcat actcctattc tactataatc attatttttt attttgtaaa aatatgcaac
      301 attatgaaac attctgttat tctactaata ttatatatct gtttcatgaa ataaaatgtt
      361 ttttcttttt gtctttcact ttgtaagcat aattgaaaag aatttcttgc atcggtaatt
      421 atagtttgtc taatagtcat ttggatactt gaattgacca gatttctgtc attaatcatc
      481 ttcttttact ctatcttatc atatttagat ttgtagtcat tctgtataat catttttcat
      541 ttctttcttt ctttttgttc aattaaaaag tacaaatcct tgtaatttgt cttcattgtt
      601 ataatgctca taggtagtat ttgttttttg tatgctgtag caagtgcagt atttataaca
      661 gttcttacat taaaatcaag tttccttaac aaatcacatt tctttaacca tttgttaatt
      721 atttgaaaag actcttcata cgataatttt ttaacaagaa taagataggg tgctaggatt
      781 aaacttacta ctttctttct accatcttca attggatgta ataagatttt ttcaatccat
      841 tcaatacgat tattattatt gctataatga tgatgatttg aattattatt gcttttatat
      901 ttataattgt tttagttatt attattatta ttagaatttt cttgctctgt taatttttgt
      961 tctaaatatg ttctaaaatc ttcaatgaac tctcttgtta taggaggtct ataaccactc
     1021 catttttgca atgtttttac cttaaaattg tcagataatc ttttttctct attctcaaga
     1081 cattttccat tgattgaacc tggaactctt atctgacatg atttgaaaga aggattatgt
     1141 cctggatctg attttccatt agatagaaaa ttttctgcaa atctcagaaa ttcttgtgaa
     1201 acgaaaaact catttttata tttttgaaac tgttctatct gttctaaaac aataggacat
     1261 tcaattggtt gtattatatg ataaccattt ccactattat taactgttgg aacggctcca
     1321 tttaattttt ctttgatatt tttctcagtt tttgataagg cattttcaaa acttttatca
     1381 tctttgaaat tagatctgtc tatgtcaata aatattaaat ctggaggata acgttggatt
     1441 cccttatact cggtataaga gggaaatcca ttaatcttac agtctagaaa tgatgattct
     1501 ttaaaatatc tcaatgcttc ttgctttgag aatacttcta tctgtcttcc ttctgattta
     1561 ctagtttgta tcttcctcgg aaataattgt tgtctatctt gatcaaaatg attaataata
     1621 aaatctaaac ctactatttt ttctatttct gggattgttg ttgaatttgt tgttgatatt
     1681 tgtaatgtca attttttaga tctctgctcc tctctctgct tcttcttgtt ttaatttctt
     1741 gtatagttca tttgatacct catggatctc acctttagga tggaattgaa ctctcttaac
     1801 aaattctaaa tctttttgat cttcattatt tcttggtgac gttagtgacg ttggtgacac
     1861 tggtgcctgt ccattttcat taaaaaattc tgttttttta tcaaaatttt tctcatttag
     1921 tgttttatct atgtcaccaa ggtcaccaag gtcaccaaca ctgtcgttat ctttatcatt
     1981 gttgttatca tcaaaccatt ttaatataat aggatgctca tttacttttt tgatatggga
     2041 attgtttaag agtttataac atatttttcg agttttacga ttgtttttga tttgtaatga
     2101 ttttcgagga tattcaagat aatcagcaca ttgttcatta tttttacaca cttctttaag
     2161 catatcttca aatgctatcc ctccaaaatt cttttgttgt ttaagtgagg atacacattc
     2221 attatatact atttctggtg gagattctga aatgataact tgtttttgga aatttagtaa
     2281 cataacattg taatactcca tcgcttcttt ggcatcgtat tcatcgacaa tatcttttag
     2341 tttaagtcgg gcaattgcct ttgcaatttt acgaagtgaa ggtaaaaccc tatcagatcc
     2401 aaaacccttg atttttacat taatataaaa atcttctaac attgtttttg cttcttgact
     2461 tattataggt tttagttgtc ttgcgtattc aagatatttg ataagcatta ctgtataatc
     2521 cggtaataag ccctgttcta atttggttaa tgtttcacta tatttttttc caaaaatctt
     2581 aatctcctcg ggatcttttc tatctctaaa tggaaacttt agatcaaatc tatcaatcag
     2641 tggtgttaaa agaggaaact cactcaagtc aattttatcg ttatccttcc attttgagtt
     2701 attaactgga tttgctgagg ctataatagt agttggagat ggtatcttag tagtaaaacc
     2761 ataagcagac tttgtaaact cttcttcttg cataacatct aagatatgtc cttggtcttc
     2821 tagactcatt cttcccaatt catttaatcc gcttatggct cctcttgctt gtgggattga
     2881 accaagtcgt aggaacaagt tttcatctgt tttatcgatt attgcagtga tccttttacc
     2941 tgaagtattt tgtgcgctaa cgtaattact gttaggaatt aattgtgtag ttctttttaa
     3001 taattgagat tttgcaagtc ctggatcacc tattaatact gagtgtattt tctctttttt
     3061 tgaagtaatc tcggaagtat taactgctga cattaacaac ccttttttca catattcata
     3121 tccaactaca gaaggatcaa acattgaaac gagttgatca attattttgt tgttgcggtt
     3181 gatttttaca agttttttaa tagcctcaac atctaatttt gttaaaatta aattatcttt
     3241 gtttaggtat attatagaac tggtataaag ataaggaatt tgttttttat tgtttatctc
     3301 atttataata tgaatttcac catttacaac tactgtatca cctgctgtta catcttcggt
     3361 atctttatca aataaaataa cagacaagcg atccatatca ttaaaatttt cgatatcttg
     3421 tagttcgatt tttacagcat ttttgtgttc aatatcacta atagtatcgt cttgaatagc
     3481 ctttatcttt ctagtgcatg atttacatcg tcttgaaaaa ccaatagtat ttgaaatagg
     3541 aaaactatta aaattatatt cattatcttt tgaacatgta tcacaataaa gtgaaatctt
     3601 tgatatcatc ttgtaaagtt tagatattcc tattatagtt cccttaacgt tcaccttacc
     3661 tgaatgcatt ctaagtgctt gagatacgga aacgatttta attatttctt tttcattatt
     3721 attttcagta ttgctttttt cttcttggtc actaataacg tcaccaaggt cattttgttg
     3781 ttgttgatta caactattag tagcggaatt gttatgatga ttatcgtttg ttgttgacct
     3841 tgctatacta cgaattaatt caccattatc agttacattg ctaactatcc aattctcatg
     3901 atttttatca attttatagg gttttaattc atttctaaat ttgttggtaa atcttgtcca
     3961 tccatctttt tctttaatta cttcagttga aacatctaac gaaattactg gattgtattt
     4021 agaatttaat cgaagtttga catatttatc gttaggatct attacaaatt tttgaatagt
     4081 tcctgactct tctaaaattt tggaaagttt aagtggaatt tcaaattgat tattattact
     4141 aatactcata tagtttaaac ctcttatttt ttgaattttt gaaataacga atctaccatc
     4201 aagtcggcag acagaaatac tttaccaccg gtatttctta ttattgatct atggtcttcg
     4261 tcatattcat ggtatcgctc ctgcattggg ctaaaaatac tatcaccagt atctgacaat
     4321 atgtttataa tttcatattt cgactttact agatctcttc ctaatgactg acaattagga
     4381 catgcaaaag gacaacataa acccttatta gatcgtttct tgttattatt tttgtagttc
     4441 atcttatcat ctcttgcttg ggattgtggt ggaaggttaa tggtggacct gcctactttt
     4501 ccaggcttca atttttatat aattccccct tcaatcgact aaattttaat tcgtctaatc
     4561 cattgttcca aactactttt ttatatgttt tagtttgagg atcataaaca tcatatattt
     4621 tcatttgtat catcctctct acttttcttt cttttactca ttatagtgat tgtagttttg
     4681 cactttggac aagaacaaaa aaatagattt tgtccagtat atatccaatc gtgtccacag
     4741 cgatgacagt tcatttttaa tccttgtttt tctggaattg ttataatttc aaacatttaa
     4801 cggtcagtat tatttataaa catctttcgc taaactttcc cttaactatt agtagtacac
     4861 ctaagatgag aacaagaaat aataacaatg ggtataaaat catagacaat atttatgaat
     4921 caaattcaaa tggtacagga tttaggcaat taatgcgaaa gacaggccta tatcaaaaag
     4981 ccctttcatt atggctaaaa tatttaatca ttgatttaaa ttttataaaa atagattcaa
     5041 aaggacgata tcatctaaca gaaaatgcga taaaaaaata cactactaat actctgatca
     5101 tacctccaga tcctagaagt aaaaaagttg agaaaaataa aataaaaaaa cagtatataa
     5161 caaaaaaatt cgataaaaat tatgctgaaa ttataatttt aattttatgt ttggctgttt
     5221 ttggagttaa taagtataga ttgggatcag gattaggaag tagtgtttat tcagatccta
     5281 ttaataaa
//
LOCUS       DATIAS010000726         5305 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_675537, whole genome shotgun sequence.
ACCESSION   DATIAS010000726 DATIAS010000000
VERSION     DATIAS010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5305
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675537"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1091)
                     /locus_tag="VLA74_14580"
     CDS             complement(123..1091)
                     /locus_tag="VLA74_14580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HSF51981.1"
                     /translation="MSNDYALWILFGIFVGIALSIDLGLFGKFKNIIIKQKEKNPIHN
                     HTQQDILDSNHESFQKLQQQTRDALKWTIVWISLAGIFAVIVFFNMGYEKMLEFVTAY
                     TLEKSLSVDNMFIFLLVFSTLSIPYIYQHRILSVGILSAIVFRILLVLVGVSLLESFH
                     WMIYVFGGLLILTASRLIFQKKEKKIDLEKNIAIRMLKVFVPINLNIKSNKFLIKQEG
                     ILYATPLLVALVIIELADILFAIDSIPAVLAISSDYFIVITSNIFAILGLRSLYLLLA
                     GIMEKFYYLKPALVLLLFFIGIKMLISDIYKMPVLLSLIIIDLLRN"
     gene            1583..2542
                     /locus_tag="VLA74_14585"
     CDS             1583..2542
                     /locus_tag="VLA74_14585"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSF51982.1"
                     /translation="MINNFVICGFLSVLLFYGISSYGIIFGESNNTEYQFLNKFGGKG
                     SEDGQLTSPHSIDIDKEGNIYVTDTGNDRIQKYDLGGKFILKWGEEGSEDGQFDKLHD
                     VYVDPSGQFIYTLELSNHRVQKFTPDGKFILKWGFEDTGGRGAERTPHQLSIDSNGSV
                     YLTDRNAHQILKFDENGKFIESYGSKGSTEGKFLEPHGIVFDSNNTMYVTDMKNSRVQ
                     VFDKDFNFKRQWGSFGNASGQFSGTAPGIDYYEKQDLVFVVDKTSTNFQVFDENGKFI
                     SKLGSKGKQDGQFNRPEDLAIDPEGNVFVADTGNSRIQVFGNK"
     gene            2860..3942
                     /locus_tag="VLA74_14590"
     CDS             2860..3942
                     /locus_tag="VLA74_14590"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSF51983.1"
                     /translation="MSESKSIDEKKLNSFMDKIFNDLSGSYTTLLCIIGDRLDLFKKL
                     EKYGPITSQDFAQKSNTSERYAKEWLNGLTCAQYIEYNPIDNTFRLPDEHAQALTKEG
                     GPMFVAGIYQSLFGEVKNLDRLLEAFQNCKGIPIEEYDKNEFLGTERMTSSWFENLLI
                     QEWIPSIPGLIKKLKEGIKVADIGCGRGKAIVKLAKTFPNSKFYGYDIHKESIEGAIL
                     NAKNEKLDNNVFFKISNITNEGLPEKEYDLITTFDVIHDMAHPYDALQIIRKSLKDDG
                     TYLLLEINTKDKLEDNIGPFGTLFYGWSIMYCMTVSLGAGGEGLGTAGLPESKVKEYC
                     TRAGFKYIKKVPLDNPFNSLYEVKNK"
     gene            4098..4289
                     /locus_tag="VLA74_14595"
     CDS             4098..4289
                     /locus_tag="VLA74_14595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51984.1"
                     /translation="MSRPLDSREFKLILKPKIFQVQIDKEIEMLNDKFIHDSDLKLNS
                     EEPTTWIQVISDQNRKISF"
     gene            4588..>5305
                     /locus_tag="VLA74_14600"
     CDS             4588..>5305
                     /locus_tag="VLA74_14600"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSF51985.1"
                     /translation="MTIQEIDQVSITILMDNSTDLLLTNSNHANRPPITKNEKFILPL
                     PVAEHGFSALVNIVIDSENEKEKNNLNKNIKYKNNKKYLFDTGPSENGIIHNADIFGI
                     AFDQIDGIILSHGHFDHFTGLANILRRILLSKQDNTTKIDLFVHPEAFLKRWEVYQNG
                     ERTKMPLLDEEHLQELGALLHKNIGVIFLPSDDSPSLMLTGEIPRKTSFEKGFPFQYV
                     ENQSGNEIKLVPDPLVRDDQA"
BASE COUNT         2037 a          718 c          808 g         1742 t
ORIGIN      
        1 tttgcgtaat taggaaggaa tcaaaatatt ctgaaaatat aactaatttt tataaatttt
       61 ataaatttaa taatattatt ctcttttatc ttggatcaaa tatgtaatat tttatattgt
      121 cactaattac gcaatagatc tataataatt aatgaaagta aaactggcat tttatagatg
      181 tctgaaatta acattttaat tccaataaag aatagcagta acactaatgc aggcttgaga
      241 taatagaatt tttccattat cccagctaaa agtagatata aacttctgag cccaagaatt
      301 gcaaaaatat tggatgtgat aacaataaag taatctgaag agatagccaa cactgctgga
      361 attgaatcta tagcaaataa tatatcagcc agctcgatta tcactaatgc aacaagaaga
      421 ggtgtagcat ataatattcc ctcttgtttt attaaaaact tatttgactt tatgtttaaa
      481 tttataggta caaatacttt taacatacgt attgctatat ttttttctaa atcaatcttt
      541 ttttctttct tttgaaaaat caatctacta gcagttaaaa ttaataaacc accaaataca
      601 tatatcatcc aatggaaact ctctaaaaga gaaacaccaa ccaatactaa taatattcta
      661 aatactatag cactcagtat tccaactgat aaaattcgat gttggtaaat atatggaatt
      721 gataaagtag agaaaactag taaaaatata aacatattat ctacgctcaa acttttctcc
      781 agagtatatg cagtaacaaa ttcaagcatt ttttcatatc ccatgttaaa gaatacaatt
      841 actgcaaata ttcctgctaa tgatatccag actatagtcc attttaaagc atcccgagtt
      901 tgttgttgta gtttttgaaa agattcatga ttagaatcta gtatgtcttg ttgagtgtga
      961 ttatgaattg gattcttttc tttttgttta attattatgt tcttaaattt tccaaataat
     1021 cctaaatcaa tagataatgc aattccaacg aatataccga agagaatcca taaagcataa
     1081 tcattactca taaatataaa ttccaaatat aataaactcc atcaaaacct aagtacttat
     1141 ttttgaaatt tgggatgaat taattgattc tgtcttaaac tcaattccta ttttcattaa
     1201 aatattcagt acaatatata gtttataagc attataatag ataaaatagt gatctatagg
     1261 aaaaatatag aatagataat tttttctttt gcctttaata taatttatat aaaatatgga
     1321 aaaaataata ttctatgttg atttattatt tggacctcta gtaaaggaag cagccagtaa
     1381 aatgatagac aaagtgtacg gagacataaa tacatttaga aagtagatct tatatattca
     1441 ttattttttt tcttttttta tttatataga cttgaataaa cattaagata aaattcaaat
     1501 ttcattggaa aaattaatat actcaatttt tgtcatgcta aaaaattagc atttataaat
     1561 attaatcaat catatcataa caatgattaa caattttgta atatgtggat tcttatctgt
     1621 tttattattt tatggtattt catcatatgg aattattttt ggtgaaagta ataatacgga
     1681 atatcaattt ctaaataaat ttggaggcaa aggaagtgaa gatggacaat tgacatctcc
     1741 tcatagtatt gatattgata aagaaggaaa tatttacgta acagatactg gtaatgacag
     1801 aattcaaaaa tatgatttag gtggtaaatt tattttaaaa tggggagaag aaggatctga
     1861 agatggacaa tttgataaat tgcatgatgt atatgtagat ccatccggcc aatttattta
     1921 cacactagaa ctttcaaacc acagagtaca gaaatttact cctgatggta aatttatttt
     1981 aaaatgggga tttgaagata ctggtggtag aggtgctgaa agaaccccac atcagttatc
     2041 tatagattca aatggctctg tctatttaac tgatagaaat gcacatcaaa ttttaaaatt
     2101 tgatgagaat ggtaaattta tagagtcgta tggttctaaa ggttctacag aaggaaagtt
     2161 tcttgaaccg catggaatcg tttttgattc taataacaca atgtatgtaa cggatatgaa
     2221 aaactcacga gttcaagttt ttgacaaaga ctttaatttt aaaagacaat ggggatcatt
     2281 cgggaatgca tctggacagt tttcaggtac tgcccctgga atcgattact atgaaaagca
     2341 agatctagtt tttgttgttg ataaaacatc aactaatttt caagtatttg atgaaaatgg
     2401 taaattcata agcaaattag gatctaaagg aaaacaagat ggacagttca atagacctga
     2461 agatcttgca atagatcctg aaggaaatgt gtttgtagct gatacaggta attccagaat
     2521 acaggtattt ggtaataaat aattacatat agtgattctg gtatttcttt tagagtcaaa
     2581 agctctaaag ctgttaatat aactagtatt ataatatgag aaggaagtcg tttttctaga
     2641 tttccacatc cgaatgaaat accaacttac ctacgagaaa tgttagagtt gagctcatgg
     2701 tttaattttg ccatttatta caatagataa tcatcatatg agtttggaaa acaaatttaa
     2761 catagaatag aattaaaatt tataacaatt tatgattatt tattctcact gttccttaat
     2821 atattaaaat aatcctctac atattcttaa taattagtaa tgagtgaaag caaaagtatt
     2881 gatgaaaaaa aactaaattc atttatggac aagatattta atgatttaag tggaagctat
     2941 actactttac tttgtattat aggagacaga ttagaccttt ttaaaaaact tgaaaaatac
     3001 ggtcctataa caagtcaaga ttttgcacaa aaatccaata caagtgaaag gtatgcaaaa
     3061 gaatggctta atggattgac ttgtgcacaa tatatagaat acaatcctat tgataatacc
     3121 tttaggcttc cagatgaaca tgcacaagca ttaacaaagg aaggaggacc tatgtttgta
     3181 gcaggaatat atcaaagtct atttggagag gttaagaatt tagacagact tttagaagct
     3241 tttcagaatt gcaaaggaat tccaattgaa gaatatgata aaaacgaatt tttaggaaca
     3301 gagagaatga cctcaagctg gtttgaaaat ctcttaatac aggaatggat accttcaatt
     3361 cctggtttga ttaaaaaact aaaagaagga atcaaagttg cagatatagg ctgtggacgt
     3421 ggaaaagcta ttgttaaatt ggctaaaacc tttcctaatt caaagtttta tggatatgat
     3481 attcataaag aatcaattga aggtgcaata ctcaatgcaa aaaatgagaa attagacaat
     3541 aatgtttttt ttaagatatc taatataacc aatgaaggtc taccagaaaa agaatatgac
     3601 ttgattacta cattcgatgt tatacatgac atggcccatc cttatgatgc tcttcaaata
     3661 ataaggaaat cacttaagga tgatggaact tatcttcttt tagaaattaa tacaaaggat
     3721 aaacttgaag acaatattgg tccatttgga actttattct atggttggag tatcatgtat
     3781 tgtatgactg tttcccttgg agctggcgga gaaggccttg gtactgcagg tctaccagaa
     3841 tcaaaagtga aagaatattg tacacgtgct ggtttcaaat acatcaaaaa agttcctctt
     3901 gacaacccat tcaattcatt atatgaagta aaaaataaat aacatatttt acaaaattac
     3961 tatttataac caattcacta acaactataa ataatcaata ctctattcag catatttata
     4021 atgacaaaaa agacaacttc atcatataat attcaatact tgtatttggc ttgtattatt
     4081 aggaacatat tttttgtatg agtagacctt tagattctag ggaatttaaa ttaatattaa
     4141 aaccaaagat atttcaagtt caaattgaca aagaaattga gatgttgaat gataaattta
     4201 tacatgattc ggatttaaaa ctaaattcag aagaacctac tacttggata caggtgattt
     4261 cagatcaaaa tcgaaaaatt tctttttgag agtaagggag gacaaggaat caaataaatt
     4321 atgatagtac tttaaaatgt agacatcctg atagatacat atcatcatct tacgatcatt
     4381 ataattctat gaaaaaatct acaattaaat ttgaagaaga tataattgct cctcatgtaa
     4441 gtaaattttc tatttcagtc accttattac tactactatt cacacagggg tatggcagca
     4501 aaaatgacta aactagcaac tatgaactcc attactatac tcttaatgaa tagataaagg
     4561 atagtagttt ataggtatag aaaggtaatg actatccaag aaattgatca agtctccatt
     4621 acaattctta tggataactc caccgaccta ttgctaacaa actctaatca tgcaaataga
     4681 cctccgataa cgaagaatga aaaattcata cttccacttc cagttgcaga gcatggattc
     4741 tctgctcttg tcaatattgt catagacagt gaaaatgaaa aggagaaaaa taacttgaat
     4801 aaaaatatca aatacaaaaa taacaaaaaa tatctctttg atacaggacc aagcgaaaat
     4861 ggtataattc ataacgcaga catatttgga atagcttttg atcagattga cggaattatc
     4921 ttaagtcatg gtcattttga tcattttaca ggacttgcta atatactaag gagaatatta
     4981 ttatcaaaac aagataatac tactaaaatt gatctctttg tgcatcctga ggcgtttcta
     5041 aaacgatggg aggtctatca aaatggggaa aggacaaaaa tgccattatt ggatgaagag
     5101 catctacaag aattaggagc actactacac aaaaacatag gtgttatatt tcttcccagt
     5161 gatgactctc cttcacttat gcttacagga gagataccaa ggaaaacaag ttttgagaaa
     5221 ggatttccat ttcagtatgt agagaatcaa tctggtaacg aaataaagct tgttccagat
     5281 ccgttggtta gagacgatca agcaa
//
LOCUS       DATIAS010000727         4460 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_675697, whole genome shotgun sequence.
ACCESSION   DATIAS010000727 DATIAS010000000
VERSION     DATIAS010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4460
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675697"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VLA74_14605"
     CDS             complement(<1..674)
                     /locus_tag="VLA74_14605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51986.1"
                     /translation="MSVSVSPLKEGNNGFNKVYVGTEPSGLYVSSDEGESWERMNGLN
                     NLKSSSSWSFPPRPWTHHIRWIEPDVNNLDYIFVAIEAGALVQSHDGGRTWIDRVEQG
                     PYDTHTMATHKKAPKRLYSSAGDGYFESFDYGESWNRPIVGLKHHYLYGLAVDSTNPQ
                     TVIVSASLTAYYAHYIENADSLVYRRSVDGENWKAVSKGLPESKGTIITILASNPINS
                     GEFFAI"
     gene            complement(947..1510)
                     /locus_tag="VLA74_14610"
     CDS             complement(947..1510)
                     /locus_tag="VLA74_14610"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSF51987.1"
                     /translation="MDLPWNDERSNQFITNVGLITSDGPFGPNVMACEWTHHISYHPG
                     LIAVSLGQTKATVENIRRSKEFGINLCSSDQSVLSSVAGGYTGAKYDKVNALKELGFE
                     FYKAKRIIPLMIKGAAVNIECRLYKEITLGDHITFVGEVIEASSNPDKVPLAYHGGKY
                     WIMDTNLVKPSKEERERIKKVVEKYSR"
     gene            complement(1527..1889)
                     /locus_tag="VLA74_14615"
     CDS             complement(1527..1889)
                     /locus_tag="VLA74_14615"
                     /inference="COORDINATES: protein motif:HMM:NF036395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase family protein"
                     /protein_id="HSF51988.1"
                     /translation="MNKIIEIIEKEILSWPYVTAEPHRFGGIEFRLDKREMGHVHIEG
                     LADIPFPMKIRDELVNSGRVKPHHVLPQSGWVSYWFHNNNKEEDISTVIELFRLRYEQ
                     LKTKTQIKSDIIVIPKKN"
     gene            2163..2852
                     /locus_tag="VLA74_14620"
     CDS             2163..2852
                     /locus_tag="VLA74_14620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF51989.1"
                     /translation="MTISHNLENISGGFSEPKKKMLYYLKVMQQAGLGELANVMKISR
                     MAVHKHLAILQNRGLVESIEVRGNVVGRPRMVYQLTSQSKTVFPKSYSAIATHALDFI
                     ERNMGKEGVEKVLRERQSDLFEQYYKRLKNLDFDKQVKELARIRDEEGYIAESKKESK
                     KSDDSGGKYVILEYNCPIIHIAEKHWEACSTESELFEKLLGADIETTHRVAKGDSICK
                     FVIKQRREEYF"
     gene            complement(3421..3789)
                     /locus_tag="VLA74_14625"
     CDS             complement(3421..3789)
                     /locus_tag="VLA74_14625"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51990.1"
                     /translation="MNVIDYQYQSIAVVDDEEDIVTLFTDALEENDYQVMGFTNPLLF
                     LDYVQEYPDRFDLIIVDYKMSPMKGCELTKEIVAINPKIKMILITAYDDIKNNDLNLE
                     IVKKPITITKLLQIIQQKLD"
     gene            complement(3888..4244)
                     /locus_tag="VLA74_14630"
     CDS             complement(3888..4244)
                     /locus_tag="VLA74_14630"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSF51991.1"
                     /translation="MAITKSIVVVDDEPDVVELFKDAISSYGYGVDAFTDPLIALAHI
                     KRNPKQYNLLITDFSMSKLNGCKLGIKVKELNDKIQVLFISAYSNIECNKLNFELLNK
                     PIPIQTLIDKVNEYTK"
BASE COUNT         1460 a          732 c          657 g         1611 t
ORIGIN      
        1 ttgatagcaa aaaattctcc gctattaata ggatttgacg caaggattgt aattattgtt
       61 cccttagatt ctgggagacc ttttgaaaca gccttccagt tttcgccatc caccgatctc
      121 ctgtatacta gggaatcggc attttcaata taatgtgcat agtacgctgt tagagaagct
      181 gatacgatca cagtttgagg attagttgaa tctacagcaa gtccatagag gtaatgatgt
      241 ttaagcccta ctataggcct attccaggat tctccataat caaagctttc gaaatagcca
      301 tcacctgcag aagagtatag ccgtttaggt gccttcttat gagtggccat cgtatgagta
      361 tcataaggac cctgttctac tcggtctatc caagttctgc caccatcatg gctttgtact
      421 agggctccag cttctatggc aacaaaaata tagtctaaat tatttacatc tggctcaatc
      481 caacgaatat gatgggtcca aggtcttgga ggaaagctcc atgaagagga tgacttcaga
      541 ttattgaggc cattcattct ttcccaagat tcaccttcat cacttgatac ataaagtcca
      601 cttggttcag ttcccacata taccttatta aatccattat ttccttcttt caagggacta
      661 actgaaactg acattatatt agaaatggag attccactct ttccaatact atcccaattt
      721 tgtccaccat catcagtttt ccataaaccc ttgccaaatg taccacagta tgctctgttt
      781 ggattatgac gatcgaatgc tatacattgt ggatgaattc cttttaaatt ctcataaacc
      841 ttcctccagt ctttgaagat tcaagcacaa gaattgaatt ttgcattcca gctataagcg
      901 tagtcattaa aagacaaaaa ccctcctttt cgtgtctcaa cttgtatcat cttgaatatt
      961 tttcaactac tttttttatt cgttcgcgct cttccttaga tggttttact aaatttgtat
     1021 ccatgatcca atactttcct ccatggtatg caagtggtac tttatcagga ttactggaag
     1081 cctcaatgac ttcgccaaca aatgtgatat gatcgcctag agtaatttct ttatataatc
     1141 tacattcaat atttactgca gctcctttta tcataagagg aattattctc tttgctttgt
     1201 agaattcaaa tccaagctct tttaatgcat tgaccttgtc gtacttggca ccggtgtaac
     1261 cacctgcaac actagataat actgattgat cacttgaaca taaattaatt ccaaattcct
     1321 ttgatcttct gatattttca actgtagcct ttgtttgacc cagagaaaca gctatcaaac
     1381 cgggatggta ggatatatga tgagtccatt cacaggccat cacatttggc ccaaaaggac
     1441 cgtcgcttgt aatcaaacct acatttgtta taaattggtt tgatctttcg tcattccatg
     1501 gtaagtccaa gatataaaac accactctaa ttttttttag gaattactat tatatcgctt
     1561 ttaatctggg ttttagtttt gagctgttca tatcgcaatc taaatagttc aattactgtt
     1621 gagatgtcct cttccttatt attattatga aaccaatagc taacccatcc tgactgtggt
     1681 aacacatgat gaggtttaac acgtccagag ttaacaagct cgtctcgaat cttcatagga
     1741 aatggtatat cagctaaacc ttcaatatgt acatgtccca tttctctttt gtctagacga
     1801 aattctatac cgccaaacct atgaggttca gcagtaacat aaggccaact tagtatctct
     1861 ttttcaataa tttctataat tttattcata gatattactt tcatctttga gtttataaac
     1921 ataaaggttt acaaattata tttattctta gtcaatggat agaaagtgaa gtagttaatc
     1981 ttgcaactac taaagagact tagcgtagtg tttttttgaa ttaacaatct tagaaaatat
     2041 ataacataat atatacatat atattagaca aaaaaaaaag aaacgaataa gaacttaata
     2101 ttgacttaat ttgtaaacca aagagtttat gtatgaatta atcaattatt atatataaat
     2161 aattgactat ctctcataat ttagaaaata tttcaggtgg atttagtgaa ccaaagaaaa
     2221 agatgctgta ttatctcaaa gttatgcaac aagcaggact tggggaattg gcaaatgtta
     2281 tgaagatatc aagaatggct gttcacaaac atcttgctat cttgcagaat agaggtttag
     2341 tagaaagtat agaagttaga ggtaatgttg ttggcagacc aagaatggta tatcagctaa
     2401 caagtcaaag taaaactgtt ttcccaaaat cctatagtgc aattgcaact catgcccttg
     2461 atttcattga gagaaatatg ggcaaagaag gtgttgaaaa ggttctacgt gaacgccaaa
     2521 gtgatctatt cgaacaatat tataagcgcc ttaagaattt ggattttgat aaacaagtca
     2581 aggaattagc aaggattaga gatgaggaag gatatatcgc tgaatcaaaa aaggagtcaa
     2641 aaaaaagtga tgatagtgga ggaaaatacg ttattttaga atataattgt ccgattatac
     2701 atatagctga aaaacattgg gaagcatgtt caacagaatc agaattattt gaaaagctgc
     2761 ttggagctga tatagaaaca acacatagag ttgcaaaggg cgattcaatc tgtaaatttg
     2821 taatcaaaca aagaagagaa gaatacttct aaattatggt aatgctgaaa gtagtaacaa
     2881 tcttattctt tcttaaaaaa gctgaatata gtatattcta ttgatttgtg taatttgtaa
     2941 acatcatttg ttataagata cttgctcata attatgaaac aaaaataatc ttgatggata
     3001 tgctcctact attacagata acaatattaa ttttacttta tctgtttcat taaaagaaga
     3061 atggattatt ataggaaatt ttatttattg tcattttcat ttttatcatt tttatttttc
     3121 ttttcaattt tagaaatctt ttcttttagc aagtcataat gcaattcaat taatttactt
     3181 tttgaatatg catccaaaat gtcttcctta gtttctttaa tagattttac tttttcattg
     3241 ttatcaattc ttttattaaa gatttcatga tataatatgg atatttcctc ttttagatta
     3301 gaataatgtt ctgcatttaa ttttctgtaa aattagaggt tttttcttta ttatcgatta
     3361 ttatttaaaa ccatttgtaa tagatgttgt tattatgttt atcataaaaa tcaagtaatg
     3421 ttaatccaac ttttgttgaa ttatttgcaa tagtttagtt attgttattg gtttcttgac
     3481 tatttccaga tttaaatcat tattttttat atcatcatat gcagttatta gtatcatctt
     3541 gatttttgga tttattgcta ctatctcctt agtcaattcg caacccttca ttggtgacat
     3601 tttatagtca acaataatca aatcaaatct atctggatat tcctgaacat aatcaagaaa
     3661 taaaagagga ttggtaaatc ccattacttg ataatcattt tcttcgagtg catctgtaaa
     3721 taaagtaact atatcttctt catcatctac tacagctatt gactgatatt gataatctat
     3781 tacattcaaa gaatcgtatg ccttcgtttg tactacaaac tatttaaaaa attacctttt
     3841 ttataatgta aaaaacaaat agtaatgctt tgaattaata caatcttcta ttttgtatat
     3901 tcattaactt tatctatcaa agtttgtatt ggaattggtt tgttcaatag ctcaaaatta
     3961 agtttgttac attcaatatt tgaatatgca ctaataaaaa gaacttgtat cttgtcattt
     4021 aattctttga ctttaattcc aagtttacat ccattcaatt tgctcatact aaaatcagta
     4081 attaacaagt tatattgttt aggatttctt ttaatatgag caagtgctat taatgggtca
     4141 gtaaaagcat ctacaccata gccatatgac gaaattgcat ctttaaagag ctcaactaca
     4201 tctggttcgt catctacgac gacaattgat ttcgttattg caatagttct gacagaactt
     4261 taaactatat aagtattatt ttatagagct ttaaactcgt tgatattata atagtctttt
     4321 atcaattgcc tatttacctt attactattc tcttctctac ctttttcaga ataatttcaa
     4381 gtttttaggg catttagata tctctacttt ctattttact attacaaaaa atatgtatat
     4441 gaatcccgat ataatacagg
//
LOCUS       DATIAS010000728         3196 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_130675, whole genome shotgun sequence.
ACCESSION   DATIAS010000728 DATIAS010000000
VERSION     DATIAS010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130675"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..1351
                     /locus_tag="VLA74_14635"
     CDS             158..1351
                     /locus_tag="VLA74_14635"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase"
                     /protein_id="HSF51992.1"
                     /translation="MSQNSNFNINKNSIKDDVDLAEIESEQELPLEILEKRRKGLLRT
                     GYTTGTSASAATKAALLTLISSQLFNTIEVSLPKGKIAKLKIAWTRINQDNQSVTSAV
                     IKDGGDDPDVTHGAEICSTVSLTNNKGLIEIDGGIGVGRVTRPGLGLEIGSAAINPVP
                     KKMIEYAVSESAKSLLLQKGIKVIIYVPKGEELAKKTDNPRLGIIGGISILGTTGIVF
                     PYSTASFAASIRQSLDVAISLGTDIVVLTTGGRSEDFIKNIYNYLPDYAFIQMGDFSG
                     YTIKQCTNRNIKKIIIAGFIGKLTKMAMGIKQTHVRGSHVSIEFMTNLASKCVDSKEI
                     INEIRKANTARHVSEIINQYNIKNFFNLICKHVQSEMYNHSNKSIEIVVIMFDFDGKI
                     CGQYP"
     gene            1479..2546
                     /locus_tag="VLA74_14640"
     CDS             1479..2546
                     /locus_tag="VLA74_14640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HSF51993.1"
                     /translation="MKEKIAVLAITKNGIKIAEIIKKNIVNAKIYVPNKFYYENSDII
                     WFSDPTQKIIADLFKANDALVCIFSLGAVIRLISNLLVDKKTDPAVLVIDDQANFVIS
                     TLSGHLGGANALTRYVSSFLNSVPVITTAADVNKTISVDLLGNEFGWIINNYENVTKM
                     SAHMVNNEKIAIFQDTGESNWWEMTKLPENVVIIKDIDNIKDIFFKGGIVITDRIITD
                     NAILSKSVICRPKTLVVGIGLHWDTTKEEILNGIRHIFNKNSLSFDSIKSLSSIKKRI
                     RVKGLDDFAKEFNIPLFLYEKEELQQISVPNPSETVKKFEGITSVSEASSILCSQGTL
                     LIPKQKFPPNLTIAVSRVNFK"
     gene            2543..>3196
                     /locus_tag="VLA74_14645"
     CDS             2543..>3196
                     /locus_tag="VLA74_14645"
                     /inference="COORDINATES: protein motif:HMM:NF017944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CbiX/SirB N-terminal domain-containing protein"
                     /protein_id="HSF51994.1"
                     /translation="MRKAFLIIDRGSKEYEVQEELFLISQKAKEKGGYVYSNYCFLEV
                     RPPYIEEGIKNCINEKVDLITVMPYFLYPGMKLKDAVKKTAEITKKLGLKLVITKPLC
                     YSEMLSSVIRDRLTKLKSDNPIQFKDIECDVLVIGHGSSDRRAREAFIFTIKSITQFY
                     KNVEFCFLELDKPNIEDGINSIVKKNPKVILIMPYFLHKGIHIKSDVIKEIKNAMEKH
                     "
BASE COUNT         1218 a          410 c          532 g         1036 t
ORIGIN      
        1 atttgttcac aagccagagc ctcctctatt aatcgtggta tttatagagg gttatggctt
       61 tcttctttta attaattctg atattttaac aataaataaa tgatagatta atcaagcatt
      121 aatgtaaatt aacagtacaa ttatgtagat gaaaattatg agtcaaaatt ctaatttcaa
      181 tattaacaaa aattcaatta aagatgatgt tgacttggca gaaatagaat ctgaacaaga
      241 acttccttta gaaatattag aaaaacgaag gaaaggttta ctacgaaccg ggtatactac
      301 tggtacctct gcttctgcag ctaccaaagc agccttatta acacttattt cttcgcaact
      361 atttaataca attgaagtct ctcttcccaa gggtaaaata gctaaattaa agattgcttg
      421 gactagaatt aatcaagata atcagtctgt tactagtgca gtaataaaag atgggggaga
      481 tgatcctgac gtaacccatg gtgcagagat atgttctaca gtatctttga ccaataacaa
      541 aggattaatt gaaattgatg ggggaattgg agttggaaga gtaaccagac cagggctcgg
      601 actagaaata ggaagtgctg ccattaatcc tgtaccaaaa aaaatgatag aatatgctgt
      661 ttctgaatca gcaaaatctt tactgcttca aaagggtata aaagttatta tatatgttcc
      721 taagggagaa gaattagcaa aaaagacaga taatccaaga ttgggaataa ttggaggaat
      781 atctatttta ggaacaacag gaatagtgtt tccttattct acggcttcct ttgcagcatc
      841 aattagacaa agtcttgatg ttgctatttc gcttggtact gatattgttg tattaacaac
      901 tggcggtaga agtgaagatt ttataaaaaa tatatataat tatcttcctg actatgcctt
      961 tattcaaatg ggggattttt ctggatatac aattaaacag tgtacaaata gaaacataaa
     1021 aaaaattatt attgctggat ttattggtaa attaactaaa atggctatgg gaataaaaca
     1081 aactcatgta agaggttcgc atgtaagtat agagtttatg actaatttag cttccaagtg
     1141 tgttgattct aaagaaatta ttaatgagat aagaaaagcc aatactgcta gacatgtttc
     1201 tgaaataatc aatcaataca atatcaaaaa ttttttcaat ctaatatgta aacatgttca
     1261 gtcggaaatg tataatcatt ctaacaaatc gatagaaatt gttgtaatta tgttcgattt
     1321 tgatggcaaa atatgtggac aatatccata gaccttattt gtttaaaatc aaaaaatata
     1381 tcaattgaac caatttaaat ttttttagaa tatattttaa tatatactga tttcaaatat
     1441 ggaaagaatt aaattaacta actaataatc taaaagattt gaaagagaaa attgcagttc
     1501 tcgccataac aaaaaatggt attaaaatag ctgaaattat caaaaaaaat attgtgaatg
     1561 ctaagattta tgttccaaat aaattttatt atgaaaattc cgatattatt tggtttagcg
     1621 atccaactca gaaaataata gcagatctct ttaaagcaaa tgatgctctt gtatgtatct
     1681 tttctttagg tgcagtaatc cgattaattt caaatcttct agtagataaa aaaacagatc
     1741 ctgccgtttt agttattgat gatcaagcaa attttgttat tagtacactt tctggacatt
     1801 taggaggggc taatgccttg acacgttatg tttcttcttt tcttaattct gtacctgtaa
     1861 taactacagc tgctgatgtt aataaaacca tcagcgttga cttactcggt aatgaattcg
     1921 gttggataat aaataactat gaaaatgtaa caaaaatgag tgctcatatg gtaaataatg
     1981 agaaaattgc aatttttcaa gatacaggag agagtaattg gtgggaaatg actaagctac
     2041 cagaaaatgt agttataatt aaagatattg ataatataaa agacatcttt tttaaaggtg
     2101 gaatagttat tacagataga ataattactg ataacgcaat tctttctaaa tcagtaattt
     2161 gtcgacctaa aaccttagtt gttggtatag gccttcattg ggatacaaca aaagaagaaa
     2221 tactcaatgg tattagacat atttttaata aaaatagttt gagttttgat tcaattaaaa
     2281 gtctttcttc aattaaaaag agaattaggg taaagggatt ggatgatttt gctaaagagt
     2341 ttaatattcc tttatttctt tatgaaaagg aagaattaca gcaaatatca gttccgaatc
     2401 cctcagagac tgttaaaaaa ttcgagggaa taacaagtgt ttcagaagct tcatctattt
     2461 tgtgttcaca aggaacttta ttaatcccaa aacaaaaatt tcccccaaat ttaactatag
     2521 ccgtatcacg agtgaatttc aaatgagaaa agcatttttg ataattgata gaggtagcaa
     2581 agaatatgaa gtacaagaag aattattcct aatatcacaa aaagctaaag aaaaaggagg
     2641 gtatgtttat tcaaattatt gttttttgga agtaagacct ccttatattg aggaaggaat
     2701 taaaaattgt ataaatgaaa aggtcgattt gataactgta atgccttatt ttctttatcc
     2761 tggaatgaaa ttaaaggatg ctgttaaaaa aactgcagaa attactaaga aattaggcct
     2821 aaaactggtt attacaaaac ctctttgtta ctcagaaatg ctttcatcag taattaggga
     2881 cagattaaca aaattaaaat ctgataatcc tatccaattc aaggacatag aatgtgacgt
     2941 tctggttata ggtcatggaa gctctgatag aagagcaaga gaggccttta tctttactat
     3001 caagagtatc acacaatttt ataaaaatgt tgaattttgt tttctcgaat tagataaacc
     3061 aaatattgaa gacggaatta attctattgt taaaaaaaat cccaaagtaa tattgataat
     3121 gccttatttt ttacataaag ggatacatat aaaaagtgat gtgataaagg aaatcaaaaa
     3181 tgcaatggaa aaacat
//
LOCUS       DATIAS010000729         5044 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_948823, whole genome shotgun sequence.
ACCESSION   DATIAS010000729 DATIAS010000000
VERSION     DATIAS010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5044
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_948823"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..926
                     /gene="purC"
                     /locus_tag="VLA74_14650"
     CDS             66..926
                     /gene="purC"
                     /locus_tag="VLA74_14650"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HSF51995.1"
                     /translation="MKLIHKGKVKDVYQSHNNNLLFVFSNRISAFDIAMKQEIPRKGE
                     ILCKFAKFWFESLNVDNHMIKTIDNNKMLVEKLSMIPIECVVRGYFYGSLVDRYYNNK
                     IDMINSPDFQILSRDFDAIIATKLSEPLFDPTTKSFDHDHPISKSKIISSKILSENDF
                     NYLRNKSIDLYHELSQIIETAGFIIADVKFEFGFNKKGEIILGDSLGPDEYRIWNKEN
                     YRKGLVQESYDKQILRDWLTKIGFKQKVNEYILHNQKPEPPQLPLSIIKKISDRYIYS
                     YEKITGNKFE"
     gene            complement(951..1376)
                     /locus_tag="VLA74_14655"
     CDS             complement(951..1376)
                     /locus_tag="VLA74_14655"
                     /inference="COORDINATES: protein motif:HMM:NF015960.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF371 domain-containing protein"
                     /protein_id="HSF51996.1"
                     /translation="MISDDIEFYGHPNVLATHPRTIEITKDDYLTREGNCIIGIKANK
                     ACNSLHPELQKLIATDNIPIKLEIIVGDDIFQINGFGNSNLTLINQHDIVIRTSNFVC
                     SRTASVKCDKASIHIPREIISKLQNRNTRGILRISVKDF"
     gene            1440..2177
                     /gene="psmA"
                     /locus_tag="VLA74_14660"
     CDS             1440..2177
                     /gene="psmA"
                     /locus_tag="VLA74_14660"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: protein motif:HMM:NF003075.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000502 - proteasome complex [Evidence
                     IEA];
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal proteasome endopeptidase complex
                     subunit alpha"
                     /protein_id="HSF51997.1"
                     /translation="MLPAAAGYDRAITVFSPDGRLYQVEYAIETVRRGTLALGIKCKD
                     GVLLAVEEKTRKLQISDVTQKIFQIDDHIGVAAAGYIPDARAQVDHARFFAQSNKLIY
                     DEPVDVEIVAKNIADMSQQLTQYAGVRPFGVALIIAGVDKTGGELFLTDPSGTFIGYD
                     AIAIGQGSDQVNEFLEKYYGNDISLEKAGKLALESIYLVSEEKTGISHIKMSFIENEN
                     KIMRKVTEEEIDKFAKMAKENPTNSKE"
     gene            2224..2886
                     /locus_tag="VLA74_14665"
     CDS             2224..2886
                     /locus_tag="VLA74_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HSF51998.1"
                     /translation="MSVQVGSKAPNLHVAEWIQGLPTNIDKNIGKVILVEVFQVNCPG
                     CFMYGIPNAIEIYRNYSRDNVVVLGLATAFEDYDKNTTDNLRLLLSSGQVIGETLNAL
                     SQYGQLHEGNKLTYKIPFPVAMDILRKNTSTYSESHILDFIETNIPNYNSFSESDKKI
                     LFERVKHYLKNKKYSALTFDEYKLQGTPSAILVDRKGILRNVFFGASNYINGLINQLV
                     NE"
     gene            2883..3800
                     /locus_tag="VLA74_14670"
     CDS             2883..3800
                     /locus_tag="VLA74_14670"
                     /inference="COORDINATES: protein motif:HMM:NF014637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative RNA uridine N3 methyltransferase"
                     /protein_id="HSF51999.1"
                     /translation="MNRKIRIFVALPDSSLSDEKNLREKTIKIGRFARAFSIFGVKKI
                     IIFKDPTIKNINSDKLLMKLILEFLNTPQYLRKLIYPLNHELSYIGLLPPIKAPQHKK
                     KIKLSELKAGELRIGLIYHRNSVINKIFSNKVTNNKKFLINLRKKNYEYYIDVGLDFP
                     IPFLGKGIDGQKIIVKFIDSYPNIKAIKATEMDIDKEYFGYDIVTINSIDEFLRKLDP
                     NTFVVFTSKKGIFFKNIESQFKDIIKKFETLLIFFGSPSKGISDIYPNFKKIDNSMYL
                     NIFPNQKTDTIRLEEALLGTLTIFNHFIN"
     gene            3933..4949
                     /locus_tag="VLA74_14675"
     CDS             3933..4949
                     /locus_tag="VLA74_14675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HSF52000.1"
                     /translation="MGHRKYSAPRRGSLAFYPRIRAKSLEAKVRNWPEHSENSSLLGF
                     AGFKAGQIQVMTTDDKEKTPNFGKQLDNPSTVISTPPINIIGIRCYKKDAYGEKAVID
                     AYSKDLPKELERKFKTKYNEKSFEVIESSFDSISSIFAIVSVSPKKANLSQKKPFVFE
                     IGVSGKDIQTKYQYLKDILGKEIKISDVFQTGQFIDVSGITRGKGIEGPITRFGVKRK
                     QHKSRKSVRALGTLGPISPAVVMYSVARQGQRGFHQRTEYNKRILMVSSADGSIQTQA
                     QPKKISINPPGGFKHFGLINTDYIVVRGSVPGVPKRLVKMRHPIRNISKRVLEPKIIE
                     VITK"
BASE COUNT         1902 a          654 c          801 g         1687 t
ORIGIN      
        1 ttatttataa atttttttat tatagataat tataaaaata tattttttta tcctatttag
       61 tacaattgaa attaatacat aaaggaaaag tcaaagatgt ttatcagtct cataataata
      121 atctcttatt tgttttttca aatagaatat ctgcatttga tattgcaatg aaacaagaaa
      181 ttccaagaaa aggagaaatc ttgtgtaaat ttgcaaagtt ttggtttgag agtctcaatg
      241 ttgataacca tatgataaaa acaattgaca acaacaaaat gttagtggaa aaattatcaa
      301 tgatacctat tgaatgcgta gtacgtggtt atttttatgg tagtctagtt gaccgatact
      361 acaataataa aattgatatg attaattcac ctgacttcca aattttatct cgtgattttg
      421 atgcaataat agctactaaa ttatcagaac cattgtttga tcctactaca aaatcatttg
      481 atcatgatca tcctatatct aaaagtaaaa ttatttcctc taaaatcttg tcagaaaatg
      541 attttaatta tttgagaaat aaatctattg atctttatca tgagctgagt cagatcatag
      601 agacagcagg ttttataatt gcagatgtaa aatttgaatt tggttttaat aagaaaggcg
      661 aaatcatctt gggagattct cttggcccag atgaatatcg aatttggaat aaagaaaatt
      721 atcggaaggg tttagttcaa gaaagctatg ataaacaaat tctaagagac tggcttacca
      781 aaattggatt caaacaaaaa gtcaacgagt atattttaca taatcaaaag cctgaacctc
      841 cacaattacc tttgtctata atcaaaaaaa tttcagatag atatatctat tcttatgaaa
      901 aaataacagg aaataaattc gaataatcaa aatgaatttt tagatattcc ttagaaatct
      961 tttactgaaa ttcttaaaat tcctcttgta tttcgatttt gtaatttaga tattatttct
     1021 cgtggtatat gaatagatgc tttatcacac tttactgaag cagtccgtga acatacaaaa
     1081 ttactagttc taattacaat atcatgttga tttattagtg taagattgct gtttccaaat
     1141 ccatttattt ggaatatatc gtctccaaca ataatttcta attttattgg aatgttatct
     1201 gtagctatca atttttgtaa ttcaggatgt aaactattac aagccttatt agccttaatt
     1261 cctataatac aatttccctc tcttgttaaa tagtcatctt tggtaatctc tatagttctt
     1321 ggatgagtcg caagaacatt tggatgacca tagaattcaa tatcatcaga tatcattctt
     1381 taagaaggtg cgttaataag gtaaatttaa attaaacact acaaagtagt aatatcgaat
     1441 tgttaccagc agcagcaggt tatgatagag ctataacggt attttctcct gatggaagat
     1501 tatatcaggt tgagtatgca attgagacag taagaagagg tactctagct ttagggataa
     1561 aatgtaaaga tggagtactt ttggcagtag aagaaaaaac aagaaaatta cagatttctg
     1621 atgtcactca aaagatcttt caaattgatg atcacattgg tgtagctgca gcaggttata
     1681 ttcctgatgc aagagctcaa gttgatcatg ctagattttt cgctcaaagt aacaagttaa
     1741 tttatgatga accagttgat gtagaaatag tcgcaaaaaa tatagcagac atgtctcaac
     1801 aattaactca atatgccggt gtaagacctt ttggagttgc attaattata gcaggagtag
     1861 ataaaacagg tggagagtta tttttaactg accctagtgg aacctttata ggctatgatg
     1921 caattgctat tgggcaagga agtgatcaag taaatgaatt tttagaaaaa tattatggaa
     1981 atgatatttc attggaaaaa gcaggaaaat tagctttaga atcaatttat ttagtgagcg
     2041 aagaaaagac tggaatttca catataaaga tgtctttcat tgaaaatgaa aataaaatta
     2101 tgagaaaagt aacggaagaa gaaattgaca aatttgcaaa aatggcaaaa gaaaatccta
     2161 caaattccaa agaataatca ttctaattaa cttattataa tgtttttact taaatgattt
     2221 aaattgtcag tccaagtggg atccaaggct ccaaatctac atgttgccga atggattcag
     2281 ggtttgccaa cgaatattga taaaaatatt ggaaaagtaa ttctcgttga agtctttcag
     2341 gtaaattgtc cgggatgctt tatgtatggg atcccgaatg caatagaaat ttacagaaat
     2401 tatagtagag ataatgttgt tgttttagga ctagctactg cttttgaaga ttatgataaa
     2461 aatacaacag ataatttaag attgttgttg tcttccggac aagtaattgg agaaacatta
     2521 aatgcactta gccaatatgg acaattacac gaggggaata aacttaccta taaaattcct
     2581 ttccctgttg ctatggatat attgcgtaaa aatacttcaa cctattctga atcccatata
     2641 cttgatttta ttgagacaaa tatcccaaat tataattctt ttagtgaatc agataaaaaa
     2701 attttatttg agagagtaaa acattatctt aaaaataaaa aatattctgc tctgactttc
     2761 gatgaatata aactacaggg tactccttct gcaatactag ttgatagaaa aggcatttta
     2821 agaaatgttt ttttcggagc tagtaattat atcaatggtt tgataaatca attagtaaat
     2881 gaatgaatag gaaaattaga atttttgtag ctttaccaga ttcttcgtta tctgatgaga
     2941 agaatttgag agaaaaaact ataaaaattg ggagatttgc tcgggcattt tctatttttg
     3001 gtgttaaaaa aattatcata tttaaagatc caactattaa aaatatcaat tcagataaat
     3061 tactgatgaa actaattctt gaatttctaa atactccaca atatctaaga aagctaattt
     3121 atccattaaa tcatgaatta tcatatattg gtcttcttcc acctataaaa gcaccacaac
     3181 ataaaaaaaa aattaaactt agtgagttga aggcaggtga actaagaata gggcttattt
     3241 atcatagaaa ttctgttatc aataaaatat ttagcaataa agtaacaaac aataaaaaat
     3301 ttctcataaa tttgagaaag aaaaattatg aatattatat agatgtaggt ctagattttc
     3361 ctattccatt tttaggaaaa ggaattgatg gtcaaaagat aattgttaaa tttattgatt
     3421 cttatccgaa cataaaagct ataaaagcaa ctgaaatgga tatagacaaa gaatattttg
     3481 gatatgatat agtgactatt aattcaattg atgagtttct aagaaagctt gatccaaata
     3541 catttgttgt atttacatca aaaaagggaa tatttttcaa aaatatagaa tcgcaattca
     3601 aagatattat caaaaaattc gaaactttat taattttttt tggttctccc agtaaaggaa
     3661 ttagtgatat ctatcctaat tttaaaaaaa tagataattc tatgtatctt aatatatttc
     3721 ctaatcaaaa gactgatact ataagattag aagaagcgct tttaggaact ttaacaatct
     3781 ttaatcattt cataaactaa ttaatataaa gaaatttatt gtcttttgtt caactaaata
     3841 ttttttctat aataatgaaa tattatcact taaccataaa ttttaaaaga tataaattta
     3901 ttaatgggat cagaaagttt tttgctgtat ccatgggtca tagaaagtat agtgctccaa
     3961 gaagaggaag tctagcattt tatcctagaa ttagagctaa gagtcttgaa gctaaggtaa
     4021 gaaattggcc agaacactct gagaatagtt ctcttttagg atttgcaggg tttaaggctg
     4081 gtcagattca agttatgaca acagatgata aagaaaaaac tcctaatttt ggtaaacaac
     4141 ttgataatcc atcaacggtg atctcaacgc cacctattaa tataattggt ataagatgtt
     4201 ataaaaagga tgcttatgga gaaaaggctg ttatagatgc ttactcaaaa gatttaccga
     4261 aagaattaga aagaaaattt aagactaaat acaatgaaaa atcttttgaa gtcattgaat
     4321 catcttttga ttctatttct tctatttttg ccattgtttc agtttcgcct aaaaaagcta
     4381 atctatctca gaagaaacca tttgtttttg aaataggcgt atcaggaaaa gatattcaaa
     4441 caaaatatca atatcttaaa gatattttag gaaaggaaat taaaatatca gatgtttttc
     4501 aaactggtca atttatagat gtatcaggaa tcactcgtgg caaaggtatt gaaggtccaa
     4561 tcactcgttt tggggtaaag cgaaaacaac acaaatctcg aaaaagtgta agagccttag
     4621 gaacattggg tcctatctct cctgctgttg ttatgtattc tgtcgcaagg caaggacaaa
     4681 gaggttttca tcagagaact gaatataata aaagaatttt gatggtgtct tctgctgatg
     4741 gttctatcca aacccaagca caacctaaaa aaatttcaat taatcctcca ggcggtttta
     4801 aacattttgg attgattaat actgattata ttgtagtaag gggatcagtt ccaggggtac
     4861 caaaaagatt agttaaaatg aggcatccta taagaaatat ttctaaaagg gttcttgaac
     4921 ctaaaattat cgaggtaatt acaaaatgag tatagcaaaa attttagagt tggatggtag
     4981 taatcaaaat actatagatc tgccaattgt tttcaaaact ccatatcgtc ctgaagtaat
     5041 tcaa
//
LOCUS       DATIAS010000730         2104 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1492497, whole genome shotgun sequence.
ACCESSION   DATIAS010000730 DATIAS010000000
VERSION     DATIAS010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492497"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1011)
                     /locus_tag="VLA74_14680"
     CDS             complement(34..1011)
                     /locus_tag="VLA74_14680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF52001.1"
                     /translation="MVDLIYGRGITDIIREMPFYLQIFKNNISIKLFHSKPAIYGSVD
                     VNNVCNLHCSHCYWWLNRKNDEQDLGVEDWKKIIKEKFKKQHHIFVVTLVGGEPLLRP
                     DIIEIFCDEMPRRVCVVTNGTFPLPRFENLYFYWISLDGTEEIHDSIRGKGSYEKTRK
                     NIFDYIEKQPKRNGKPAWKDIWLTMTINSLNYSTVIPLAQEWRGKVNKIGFQFHTPFT
                     KDDPLWLPFGDIRNRVVDEIISFKKLYPDYVVNTEKQISLMKGNWGGIDTTPIQCPSW
                     AILSLDHMGRVKQPCCIGSANNKGLKPICEKCGLGCYSILVAQGIKGNN"
BASE COUNT          726 a          355 c          266 g          757 t
ORIGIN      
        1 aaagttgttt agttttctac tatgtcatac tttttaatta ttacccttta taccttgtgc
       61 aacaagtata gaataacatc caagaccaca tttttcacat ataggtttta atcctttatt
      121 gttggcactt ccaatacaac aaggttgttt cactcttccc atatgatcta gcgacaagat
      181 ggcccatgaa ggacattgta ttggtgttgt atcaatacca ccccaattac ctttcatcaa
      241 agatatttgt ttttctgtat ttactacata atctggatat aacttcttaa atgaaataat
      301 ttcatctact accctgttac gtatatctcc aaaaggtagc cacaatggat catctttggt
      361 aaaaggagta tgaaattgga atcctatttt attgacttta cctctccatt cttgtgcaag
      421 aggtatgact gttgaatagt taagagaatt aatagtcata gtaagccata tgtctttcca
      481 agcaggtttc ccattacgtt ttggctgttt ttcaatataa tcaaatatat ttttacgcgt
      541 tttttcataa gatccttttc ctctaatact atcatgaatt tcttctgttc catcaagtga
      601 tatccagtaa aaatatagat tctcaaatct aggcaatgga aatgtgccat tagtaactac
      661 acataccctt cttggcattt catcacagaa tatctctatt atatcaggtc taagcaaagg
      721 ttctccacct actaatgtaa ctacaaagat gtggtgttgt tttttgaatt tttccttgat
      781 tatctttttc caatcttcaa caccaagatc ttgttcatca ttctttcggt taagccacca
      841 gtagcaatga gaacaatgta aattgcaaac attattgaca tctacagatc catatattgc
      901 aggtttggaa tgaaataatt ttatgcttat attattctta aatatttgta aataaaatgg
      961 catctcacgt attatgtcag ttattccacg tccataaatt agatcaacca cattttttca
     1021 tggtatttac aaatagataa acatgttttt ttgtaaaata ataattaacg atgcctgtac
     1081 agttggaata taaaataaac aagatataat gtattattta aggttctata attgaattcc
     1141 atgatgccaa taaaaaccat gatacctgtc aaagcactta acgctatcga gaaaacttaa
     1201 atattatatt cactttattg ctataacagt agactcttat ttttgcaccg ctatcggtat
     1261 tactcccgac gggacgttgg gtttctaggg cctacatatc aagatagaaa aatggaagtc
     1321 agacataagg tggtttttgg cctgcataaa taaaattttt atcttacttt tgattttatt
     1381 atttttgcta ctaaagacaa tagttttaaa atgataccat tcggatgtta tatatggtag
     1441 cctctgtata acgcccaaaa atcctttaag ttacttttac catataatat gtatgcatct
     1501 aaaagattta tgggaaagat ttagaaaaaa gaagaaaatg actgaaaatc ctaaacctga
     1561 taatcaacca gttgaaaacg cataatatac atacaaatcc taattgtttg aatactgaaa
     1621 ctatttaaag tatacagttt ttatttttta tttaagaatt ataaaataag tttctaataa
     1681 taaaagctaa atactatgta atagaaccct actacatgca agactctact cccgacgggc
     1741 ccgcagtttt ctcgggttca ctatgttaga taaaattatt attatcatca ctaaaatgga
     1801 aatttcccca acaacaacat ttatcaaaaa tacaattagg acattcaaat ggtgattggc
     1861 tatctttaca atcttttata tcacacatac aatcagcaca tttcaataca gttactattg
     1921 gagcataaat aatataaaat tgttttaatt cttataacaa aaaacaaagt ataaacttgc
     1981 agattcttca tagccttcaa ttatctttct aatttcaaaa ttacctttta taaaaaattt
     2041 tatatcttct tttgtaaaaa atctaatatg aaaaccatta atatcataaa tattttctgt
     2101 tact
//
LOCUS       DATIAS010000731         4047 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_949057, whole genome shotgun sequence.
ACCESSION   DATIAS010000731 DATIAS010000000
VERSION     DATIAS010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949057"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..664
                     /locus_tag="VLA74_14685"
     CDS             290..664
                     /locus_tag="VLA74_14685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52002.1"
                     /translation="MRYQKGKSIVTSLLMLTIMTGGLLVLNPSNSVYADDEAEVNCKD
                     LAVALISWDGLYAYIDDDDITDLEDDFGDDPNNDVDPSSFDDIVDDHMEDILDDFEDK
                     NCEKHTSNDNEDWIEEEVDFER"
     gene            1281..1613
                     /locus_tag="VLA74_14690"
     CDS             1281..1613
                     /locus_tag="VLA74_14690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52003.1"
                     /translation="MIVGFETDLEEMANKVILESKSNMSIEDHNPTHNQFLELEIEVL
                     QWVLDVKSKQDNDLHSLKRIIQERINKLYIELENTRNISNTNKISYIINILKPCLFII
                     SLNLGEKG"
     gene            1864..2850
                     /locus_tag="VLA74_14695"
     CDS             1864..2850
                     /locus_tag="VLA74_14695"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSF52004.1"
                     /translation="MTRPMAMTIPMIDSNDTVVSRRGASGLFIVGIVVIIIGFGIGFF
                     LIDDNTVEILSVIIGIVLIISSFIFIIKQYERSIVLRLGKFTKQRNPGIHSRIPFIDN
                     VLVVDIREKVREFNAERMLTKDNVPVTIDAILRYKIIEERTKDAILNVENFNEMIKQV
                     SQTTLRNNIGSSLFQDILSKREEINYHIKSIISNEASNWGIEVTGVEIRQVIIPQELE
                     AAMSKQAQAEREKMARITYSESEVLVAKKFDEASKAYANNPIAYALRQSNMLFESIKV
                     QGNTIVMVPSESLNSMGFGNLAMTVAYLENTKKAATSKEQTEKDVETNKIKE"
     gene            3218..>4047
                     /locus_tag="VLA74_14700"
     CDS             3218..>4047
                     /locus_tag="VLA74_14700"
                     /EC_number="4.4.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HSF52005.1"
                     /translation="MFKDLSKNRIDNKKPRKEGLTYIIDKLSSLDKDTFEILSPEIDM
                     VKIYNVFPLLMSESQLAKRISFYHDLDIPVSTGSTFAEYAIMNKSLDNFVKDVSKMGF
                     DIIEIGESHVDLTLEQKEKIREMILSNNLEIHWKIGKKDPRHQLGVSTIITKIEEAIK
                     VGANKIILEANQGYNVGIYDENGLVKWTFIRALTAKFPPSTFIFEAPLESQQSALLAE
                     FGERVNLSEIGIEFLASIESQRLGFLSKSSFSLTYLKPPDGGPALKFVYYIIKNKNPT
                     "
BASE COUNT         1586 a          526 c          667 g         1268 t
ORIGIN      
        1 tcgttgtccc agttgtcgtt ataagggaat caataacctg tataaaatgt ttggtttggg
       61 ttagtagcag aagatggata attatttttt aacttcatga tattatctat ctctgcaaat
      121 atttcatttt ctacctaaaa attattttct attcttccta cagttcttaa ttcagaatct
      181 tatactacta caataaaata taaattccat tctgaatata aaaatattat aagatgatat
      241 aagatccttt ctaaccataa atatattaaa ttcgaattat agaatggtaa tgagatatca
      301 gaaagggaaa tcaattgtaa catcattact gatgttaaca ataatgacag gaggtctatt
      361 ggttctaaac ccgtctaatt ctgtatatgc agatgacgaa gcggaagtta attgcaaaga
      421 tcttgctgtt gctcttataa gttgggatgg attgtatgca tacatagatg acgatgatat
      481 aacagatctt gaggatgact ttggtgatga tccaaacaat gacgtagatc catcttcctt
      541 tgacgatatc gttgatgacc atatggagga catattagat gactttgaag ataaaaactg
      601 tgagaagcat actagtaatg ataatgagga ctggatagaa gaggaagttg attttgaaag
      661 ataaaaatac atagatagac ttcaaaagat aaagttacca cctctaactt tttttcttat
      721 ccttaaacct ctaattctat aaaagaaagt atctaatgtt tagttttttt tcagaaatat
      781 aaaattaatc tcttataatg actatgacta tgaattggtt acaaatattt gggcaattct
      841 gatattagtg tcaattattc tttgaccaat aacattttaa agaaaatgaa atataaaagt
      901 tctattttat tttatctttt tacctgaaaa aattaaaaat tcttagtata aacaagtgct
      961 gcaaaaaaaa ttgcagaaca tcaaaaataa aataatttca gagcaggctt caaagttttt
     1021 agtcgttctt attcacttct agacaattat taaatatatt aagaaaatat ataatagaga
     1081 aaatattagt tggttcgatt aatcttttta taaaattaat tcatttttaa atttaccatg
     1141 aaatagtctc gtgaaaatat tgatgaccag aagagatcaa atacgatctt gatacacccc
     1201 actctccctc ctcgaagtga tcctgtatta aaataaccaa gaaattgaga tcttattgat
     1261 ttgcgaggta ttgaaataaa atgattgtag gatttgaaac tgatttagaa gaaatggcaa
     1321 ataaagtaat tctagaatcc aaatccaata tgagcataga agatcacaat cctactcata
     1381 atcagttttt agaacttgaa atagaggtac tgcaatgggt cttggatgta aaaagcaaac
     1441 aagataatga tctacattct ttgaagagaa taattcagga aaggataaat aaactctaca
     1501 tagaactaga aaacacaaga aatatctcga acaccaacaa aatctcatat atcattaaca
     1561 tattgaaacc atgtttgttt ataataagtc tgaatttggg agagaaaggc tgagaaaatt
     1621 ttattaaaaa attaataatc ggtaaagtct tagtaaaatc attaaaaata gtgcctttaa
     1681 aaaataaaag ataaatttaa aaaataaaga caagctatta aattaatata aaaatcataa
     1741 aattgaatgt gccgcagtat tattgaatat tgattgacga tccaaatgtt tgtgtaatat
     1801 tgaatttggt caaaaaatat aggaaattct aaatcatcgt caatatatta tattattatg
     1861 gctatgacaa gacctatggc tatgacaata cctatgattg attcaaatga tacagtagtt
     1921 agtagaagag gggccagcgg tttatttatt gttggaattg ttgtcattat tattggattt
     1981 ggaataggat tttttttaat cgatgataat acagttgaaa tcttatcagt aataatagga
     2041 attgtattga ttatctcgtc atttattttt ataatcaaac agtatgaaag atcgattgtt
     2101 ttgagattag gaaaattcac taaacaaaga aatcctggca tccatagcag aattccattt
     2161 attgataacg tacttgtagt agatataaga gaaaaagtta gagaatttaa tgctgagaga
     2221 atgttgacaa aagataatgt tccagttaca atcgatgcaa tattgagata caaaattatt
     2281 gaagagagaa ctaaagatgc tatattaaat gtagaaaatt ttaatgaaat gattaaacag
     2341 gtttcacaaa ctactttacg aaataacatt ggttcatctt tattccaaga tatattatct
     2401 aaaagagagg aaattaatta ccatatcaaa tccataatat caaatgaggc aagtaattgg
     2461 gggattgaag ttacaggtgt agagattcgc caggtaatca taccacaaga attagaagcg
     2521 gccatgtcga aacaagcaca agctgaaaga gagaaaatgg ctaggattac atatagtgaa
     2581 tcagaggttc tagttgcaaa aaaattcgac gaggcatcca aagcttatgc aaataaccca
     2641 attgcttatg ccttaagaca atccaatatg ttatttgaat caataaaagt tcaaggaaac
     2701 actatagtaa tggtgccttc ggaaagcttg aattctatgg gatttggaaa tttagcaatg
     2761 actgttgcat atttagagaa cacaaaaaaa gctgcgactt ccaaagaaca aacagaaaag
     2821 gatgttgaaa caaataaaat caaagaatag actgtggtta aattttataa taaaaaatga
     2881 caagttgcat aattgactac tgctaaccca tttagctgac ctattttggt catattatgg
     2941 gaactcgaaa aattacaatg agtatatggt aaagaggtga gctattattt gatattgacg
     3001 ttattgacaa ctagcatact gaattcgaaa agatgaacaa aaacaagtaa ggcagaaatt
     3061 ggtatatcaa gattcattta cgtatggaat taattggtta tatgaggata tattttcatt
     3121 taccatatag acagactgaa ggtgtagtaa gagcacatca aattaatttg gagtatacca
     3181 caaattcaaa tatacctcac ttgcattaat tgtagtcttg ttcaaggatc tttcaaaaaa
     3241 tagaatagat aataaaaagc cgcgaaaaga gggtttaact tacatcatag acaaactatc
     3301 atcacttgat aaagatacct ttgaaatttt atcaccagaa atagatatgg taaaaattta
     3361 caatgtattt ccattattaa tgtcagaatc tcaattagca aaacgaatta gcttctatca
     3421 tgatttagat attcctgtat ctacaggaag cacatttgca gaatatgcga taatgaataa
     3481 atcacttgat aattttgtaa aagatgtttc taagatggga tttgacatca tagagatagg
     3541 agaaagtcat gtagacttga ctctggagca gaaagaaaaa atccgtgaaa tgatattatc
     3601 caataactta gagatccatt ggaaaatagg aaaaaaggat ccacgccatc aacttggagt
     3661 aagcaccata attacaaaga tagaggaggc aataaaagtt ggagcaaata aaataatttt
     3721 agaagccaat cagggatata atgtaggcat atatgatgaa aacggtctag taaaatggac
     3781 ttttattaga gcccttacag ctaagtttcc accaagtaca tttatttttg aagctcctct
     3841 tgaatctcaa caatctgcat tattagccga gtttggtgag cgagtaaatc tttcagaaat
     3901 aggaatagaa tttctagcat ctatagaatc gcaacgatta ggatttttat ctaaatcaag
     3961 tttcagttta acatatctta aaccaccaga tggtggacca gcattgaagt ttgtgtatta
     4021 tataatcaaa aataaaaatc caacaga
//
LOCUS       DATIAS010000732         2036 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1492842, whole genome shotgun sequence.
ACCESSION   DATIAS010000732 DATIAS010000000
VERSION     DATIAS010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492842"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..1527)
                     /locus_tag="VLA74_14705"
     CDS             complement(301..1527)
                     /locus_tag="VLA74_14705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSF52006.1"
                     /translation="MAIGTESSAIFIHVIISLALLLFTAKIFAELFHRIKLPIVLGEL
                     LAGIIIGPYALGGLPLFNGEPLVILDETIKNIGELAAIVILFVAGLEITPREFLRGGA
                     SSFTIGALGVIVPFFVGYFVFSLYGLDALETLLIATALTATSIAISIQVLTSLGKMQT
                     REARLILGAAIVDDILAIAVLSVVLTMVQTGNTTPDIMEITFLILKILGLFIVLLVGS
                     IVIVPRILHRERLWKSQGSIEGITTAIFFGGAGIAALVGLSPIVGAFAIGMAVASTRL
                     IKQVEEYVHKLQIIFAPLFFAIIGAQVDLRGINLDVLLIAGILIFIAIATKILGCGLP
                     SLIFLKKDKTKAMRVGIGMVSRGEVGLIVAGVGATSGVLSGDVYTAIIVMVAVTTIIT
                     PIWLKKSYQKEEITTT"
     gene            complement(1636..>2036)
                     /locus_tag="VLA74_14710"
     CDS             complement(1636..>2036)
                     /locus_tag="VLA74_14710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52007.1"
                     /translation="VKQMSNDASYDKIKHLVEVEDDIFAVFTIGSKKEVNDLSIDKDI
                     SIERKLVEDIITNFKDIFKEDNEKSITNDTLGKLKWKIFEYEKIRLLFISEIDKTVVV
                     LIKSNTSLDETVDNILGYYYEEDNIPKSLF"
BASE COUNT          716 a          372 c          242 g          706 t
ORIGIN      
        1 ttatcttaca tttaccatct ctcatttgcc aataccataa gaatattggt aaaacaatta
       61 ttccaatcta aaatatataa aagacaaaga aaaatttaat atcaattgat attataatca
      121 gtagttaaat ttttcattgc ctaaaaattt gtcatatcta actaatttta tagaaaatga
      181 tagatacagt ctgatatctt tgacaaatta tatgttatta gcagtagtat tatcatttct
      241 tcctttttca catttctact ttaattaaat ccctattgtt agaagaatta gataatcaat
      301 ctatgttgtt gttatttctt ccttttgata ggatttctta agccatatag gtgtaattat
      361 tgttgtcaca gccaccataa caataattgc agtatagaca tctccagata atacgcctga
      421 tgttgcacca actcctgcca caattaaacc cacttctcct ctagatacca tccctattcc
      481 aactctcata gctttggtct tgtctttttt aagaaaaatc aatgagggta atccacaacc
      541 aagaatctta gtggctatcg ctataaaaat aagtattcct gctatcaata atacatcaag
      601 attaattcct cgtaaatcaa cttgtgcgcc aattatagca aaaaaaagtg gagcaaaaat
      661 aatttgtaat ttgtggacat attcttctac ttgttttatt aatcgagtac tggcaactgc
      721 cattccaatt gcaaaagcac caacaatggg agaaagtcct actaaagcag caatacccgc
      781 acctccaaaa aaaattgcag tagtaattcc ttctatactt ccttgagatt tccataatct
      841 ttctctatga agtattcttg gaacaataac aatcgaacct accaatagta cgataaataa
      901 tcccaaaatc ttcaaaatga gaaacgtaat ttccattata tcgggagtag tattacctgt
      961 ttgtaccata gtaagaacta cagataaaac tgctattgct aaaatatcgt ctactatggc
     1021 cgcacccaaa atcaatcgcg cttctcttgt ttgcatcttt cctaaagatg tcaaaacttg
     1081 aatagatatt gctatactag tagcagtcaa tgctgtagca attaaaagtg tttcaagtgc
     1141 gtccaatcca tacagagaaa atacaaaata acctacgaaa aatggaacaa ttacacctag
     1201 tgcacctatt gtaaatgaac ttgctcctcc tcgtaaaaac tctcttgggg taatttctaa
     1261 accggctaca aaaagaataa ctattgcagc taattctcct atattcttga ttgtttcatc
     1321 aagaataact aatggttctc cattaaataa tggcaatcct cctaatgcat aaggacctat
     1381 tataattccc gctaaaagtt ctcctaatac tattggaagt ttaattcgat gaaaaagctc
     1441 tgcaaatatt tttgcagtaa atagcaatag tgcaagggaa attattacat gaataaatat
     1501 tgcagaagat tcagtgccta ttgccataat gagtaatgtt ataaaaatta atgacgttat
     1561 aaaaattaat tattcaattt tggaattcca atattggaat tgattccaag actaacactt
     1621 gcgagaacaa taatatcaaa acaaactttt cggtatatta tcttcttcat aataatagcc
     1681 aagtatatta tctactgttt catccaaact agtattgctt tttattaaga ccacaacagt
     1741 tttgtctatc tcagaaatga ataacaatct tattttttca tattcaaaga ttttccattt
     1801 taatttacct aatgtgtcat tagtaatact cttttcatta tcttctttga atatatcttt
     1861 aaaattagta attatatctt caacaagttt tctttcaata cttatatctt tatcaatact
     1921 caaatcattt acttcttttt ttgagcctat ggtgaaaaca gcaaatatat catcctcaac
     1981 ctctactaaa tgtttaattt tgtcataact tgcatcatta ctcatttgtt taacat
//
LOCUS       DATIAS010000733         2502 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_811936, whole genome shotgun sequence.
ACCESSION   DATIAS010000733 DATIAS010000000
VERSION     DATIAS010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_811936"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VLA74_14715"
     CDS             <1..187
                     /locus_tag="VLA74_14715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HSF52008.1"
                     /translation="RIRFRDKTNEETKLVYTLNSTLVAIQRTLVAILENYQTSNGVII
                     PEILQKYMGGMREIKSK"
     gene            complement(277..729)
                     /locus_tag="VLA74_14720"
     CDS             complement(277..729)
                     /locus_tag="VLA74_14720"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HSF52009.1"
                     /translation="MNNNTDKYHCIFCSIINGKNEGIIVYDNNYFLVLMDKYPISRGH
                     TLVIPKTHYDNLLYMPQNEVGKLYSLVSIIAKAVVSAVSADGFNIGQNNGKSANQIIP
                     HVHVHIIPRFKNDNSNGRWPTRYIAKEEELYDFSKKIKKQLDGLSILY"
     gene            857..1045
                     /locus_tag="VLA74_14725"
     CDS             857..1045
                     /locus_tag="VLA74_14725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52010.1"
                     /translation="MAETIEIENFNVIFSFDCPKCEYHNDEISLADLTNGSAECGMCE
                     TIFKIEGIDTLKITATIE"
     gene            1127..>2502
                     /locus_tag="VLA74_14730"
     CDS             1127..>2502
                     /locus_tag="VLA74_14730"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSF52011.1"
                     /translation="MELPSRKTLEGPSRAPHRAMYKAMGLKDKDLDKPLIGVSSSCNE
                     ATPCNIHLGNLAQFAKKGVLKSDCTPREFTTIAVSDGIAMGHEGMKASLVSREIIADS
                     IEIMMRAHQYDGLVGISGCDKSLPGTLMAMARLNLPSIFVYGGTIMPGTWNNKNVTIQ
                     DVYEAVGSFEANKITLEELIQLENVACPSAGSCGGMYTANTMASISEALGMSLPGSAS
                     PPAESEKRNEICYETGKTIATLIENSISPKDIMTFEAFENAITIANALGGSTNAVLHL
                     LAIAKEIGIKLTLKDFERIRKRTPHIVNMRPGGLYVMLDLDKIGGIPIVLKTLLKNGL
                     INGKTLTVTGKTMEQNLELFNLNSNIDQNVLSPYENPIEKEGTIKILKGTLAPDGAVV
                     KIAGVKSTKFLGKAKVFENEENAFKAISKNKIVEGDIVVIRYEGPKGGPGMREMLSVT
                     AALVGQGLG"
BASE COUNT          960 a          331 c          423 g          788 t
ORIGIN      
        1 aagaattaga ttcagagata aaacaaatga agagactaaa ttagtctata ctttaaatag
       61 cacactagta gcaattcaaa gaacactagt cgcaatttta gaaaactatc agacatctaa
      121 tggagtaata ataccagaaa tattacaaaa atacatggga ggaatgagag aaattaaatc
      181 aaagtgaatt ttatatttta tatatttgtc ttaattatta gtaaataata gaaacatatt
      241 aaatttacat taagagaaaa aagaagttgt atttaattaa tataaaatag ataaaccatc
      301 taattgtttt tttatctttt tagagaagtc atataactct tcttcttttg caatatatct
      361 tgtaggccat ctcccattag aattatcatt tttaaatcta ggaataatat gaacatgaac
      421 atgaggaatt atctggtttg ctgattttcc attattttgt cctatattaa atccatctgc
      481 agaaactgct gaaactactg ctttagctat aatactaaca agagaatata atttgcctac
      541 ttcattttga ggcatataaa gtaaattatc ataatgtgtc tttggaatca ctaaggtatg
      601 tccacgacta attggatatt tatccatcaa tactaaaaaa taattgttat cataaacaat
      661 tattccttca ttcttcccat taattattga acagaaaata caatggtatt tatccgtatt
      721 attattcata ataacttttt tctatcatta ctaatattac tatttatttc ttgatattcc
      781 aaatataaaa tttaaaataa gcataaatta ttatagccaa ttttaaatat aactatttcc
      841 tcctatctct tacataatgg cagaaactat tgaaatagag aattttaatg taattttttc
      901 atttgactgt cctaaatgcg aataccataa tgatgaaata tctcttgctg atttgactaa
      961 tggaagtgca gaatgcggaa tgtgtgagac tatctttaag attgaaggaa tagatacatt
     1021 aaaaattaca gctacaatag aataaaaaat aaatttttag atttttcgta tatattataa
     1081 ttttgaagga aagactatta aaatatacct ttatattctt aatttaatgg aattacccag
     1141 tagaaaaact cttgaaggac catcaagggc acctcataga gctatgtata aagcaatggg
     1201 attaaaagac aaagatctag ataaacctct tattggtgta tcttctagtt gcaatgaagc
     1261 cactccttgt aacatacatt taggtaatct tgcacaattt gcaaagaaag gggtattaaa
     1321 gtcggattgt actccaagag agtttactac tattgcggta tcagatggta tagctatggg
     1381 acatgaaggt atgaaagcat ctttagtcag tagggaaata atagcagact caatagaaat
     1441 tatgatgaga gcccatcaat atgatggttt agtgggaatt tcaggttgtg ataaaagttt
     1501 gccaggaaca ttaatggcca tggccagatt aaacttacct tcaatttttg tctatggagg
     1561 aacaataatg cctggaactt ggaacaataa aaatgtaaca atacaagatg tttatgaagc
     1621 tgttggttca tttgaagcaa ataagatcac tttagaagaa ctaattcaac tagaaaatgt
     1681 tgcttgtcct tctgctggtt catgtggagg tatgtatact gcaaatacaa tggcatctat
     1741 cagcgaagct ttaggaatgt cgttacctgg tagtgcttcg cctccagcag aaagtgaaaa
     1801 aagaaatgaa atatgttatg aaacaggaaa gactatagca actcttatag aaaatagcat
     1861 tagtccaaaa gacataatga cttttgaagc atttgaaaat gcgataacta ttgcaaatgc
     1921 attaggagga tcaacaaatg cagtattgca tctcctagca atagcgaaag aaataggtat
     1981 aaaattaact ttaaaggatt ttgagagaat acgaaaacgt actcctcata ttgtgaatat
     2041 gagaccagga ggattatatg taatgttaga tttggacaaa attggaggga ttccaatcgt
     2101 attaaaaacg ctattaaaaa atggactgat aaatggaaag acactaacag ttaccggcaa
     2161 aacaatggaa caaaatttag aattatttaa cttaaattca aatattgatc aaaatgtttt
     2221 gagtccttat gaaaatccta ttgagaaaga aggaacaata aaaattttaa agggtacgct
     2281 agcaccagat ggtgctgttg taaaaatcgc tggagtgaaa tccaccaagt ttttaggaaa
     2341 agcaaaggta tttgagaatg aagagaatgc atttaaggca atatctaaaa ataaaattgt
     2401 cgaaggcgat atagtagtaa taagatatga aggtcctaag ggaggtccag gtatgagaga
     2461 aatgctatct gtaactgcag cattagtagg acaaggtcta gg
//
LOCUS       DATIAS010000734         2784 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2040043, whole genome shotgun sequence.
ACCESSION   DATIAS010000734 DATIAS010000000
VERSION     DATIAS010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040043"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            345..1475
                     /locus_tag="VLA74_14735"
     CDS             345..1475
                     /locus_tag="VLA74_14735"
                     /inference="COORDINATES: protein motif:HMM:NF019642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSF52012.1"
                     /translation="MSEENKDFVKVADTTDIQPSHMKEVQVAGESICIVNVEGKYYAI
                     GNICTHEGGPLADGTLVGYEVECPWHASKFDVRTGEVKEPPASEPEPVYQIKVDGNNI
                     LLKKQDKKSKSPLHQIELTLIEKDKVEGTDVMSFKFNKHNDDSDVENKTLLDYTAGQF
                     AFFDIGEVYNDPKGPIRHFTISSSPTENFIMFTTRIRDSPYKKRLLALEKGTKVKVRG
                     PEGQFVIHQDYTKPVVFLSGGIGVTPFRSMIKYVTDMQLPVKIIMFDSNRNLNNIIFK
                     KEFDEWASINKNLKIIYTISEKDQNDEQSLSLSTATDDWKGEYGRINKAMILKYVDTH
                     VLDNSIFYICGPPSMLKAMQSLLQEDLEIPKERIKVEEFTGY"
     gene            1914..2522
                     /locus_tag="VLA74_14740"
     CDS             1914..2522
                     /locus_tag="VLA74_14740"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSF52013.1"
                     /translation="MNLAKKLLLFALVSTTFFINIILSNTTVFAGINEVFAVTNNTTD
                     FGGNTALSNNTILVKPSSLEAEHKEVHEKLEKIVSSSGDTANIAKQVQSIMQPHFEKE
                     EQLSIPVLGALQPYVNGILTERTKNQAIQISQQFKQEYPTMLEEHKQIVAALDNLENT
                     AMKENRQDVISFIADLKSHAMNEEQVTYPATIVIGELLELKK"
BASE COUNT         1097 a          394 c          447 g          846 t
ORIGIN      
        1 taaacaagaa attgttaaat tattcttgga aaaagctgaa caaggaacaa taactttact
       61 ctatagttca aaagaagaaa aatacaataa tgctatagca ttaaaagaat atttacaatc
      121 caacaaatta caactaaaat aaattagaag aaagcaaaaa aaacagtatt atagatagtc
      181 aaatcatatc tattggctcg tgagacagag gaaaaataat aataataata ataattgttc
      241 aaagcctcag atcataattg tatctagaaa tttatagcgt atctagatat ttataggtag
      301 aaaagtatat acaatttaga cattatagtg aaaatgatca tattttgagt gaggaaaata
      361 aggattttgt taaggttgct gatacaactg atattcaacc ttcacacatg aaagaagttc
      421 aagtagctgg agaaagtatc tgcatagtca acgttgaggg aaaatactat gctattggta
      481 atatttgcac tcatgaaggc ggtcctctag cagatggaac tcttgttggc tatgaagttg
      541 aatgtccatg gcatgcttcc aaatttgatg taaggacagg agaggtgaag gaacctcctg
      601 caagcgaacc agaaccagta tatcaaataa aagtagatgg aaataacata ttattaaaga
      661 aacaagacaa aaaaagtaaa tctcccctac accagattga gctcactcta atagaaaaag
      721 acaaagttga aggtactgat gtaatgtcat ttaagtttaa taagcataat gatgattctg
      781 atgtagaaaa caaaacacta ttagattata ctgctggtca gtttgctttt tttgatatag
      841 gggaagtcta taatgatccc aaaggtccaa ttagacattt tactatttca tcttctccca
      901 ctgagaattt tataatgttt actactagaa taagagattc accatacaaa aaaagacttt
      961 tagctttaga gaaaggcacc aaagtcaagg tgagaggacc agaaggacaa tttgtaatac
     1021 atcaggatta tacaaaacct gttgtatttc tttctggtgg aataggtgtt actccattta
     1081 gaagtatgat aaagtatgtc acagacatgc aattgccagt aaaaataata atgtttgatt
     1141 ccaataggaa tcttaacaat atcatattca aaaaagagtt tgatgaatgg gcaagtataa
     1201 ataaaaattt aaagattatc tataccatta gtgaaaagga tcaaaatgat gaacaatcat
     1261 tatcactatc aactgcaact gatgattgga aaggagagta tggaagaata aacaaagcaa
     1321 tgattttaaa atatgtcgac actcatgtac tagataattc aatattctat atatgtggtc
     1381 ctcctagtat gctaaaagct atgcaatctt tgctacaaga agatttagaa attccaaaag
     1441 aaagaatcaa agttgaagag tttacgggtt attgatatga atgtaatgat tatgttctat
     1501 taatcaacta tgataacatc tagttgttgt gattttatct tcaagatgtt tatatcataa
     1561 accttcattc aaattttggc caggaaatat gtgtctgttg ttatattttc tctttaggca
     1621 tgtcaaaaat ggaattctaa acttagcaat aatcttcaaa atgagtttta acctacataa
     1681 taatatgccc aagaaatatg tgtatacacc tttattattg tgacaaataa tagaaaatct
     1741 tttttgcaac ttaacttaga tttgatgcaa agaaaaaata tttatctgca attaaaatat
     1801 tattatcatg cttgaatcga ttttgctatt tgtaccattg atctctgtaa caataatttc
     1861 aggcaacgag ttaacagaaa tctttatata tattctttat aattcgagtc acaatgaatc
     1921 tagcaaaaaa actgttacta tttgctctag tctcaacaac cttctttata aatataatat
     1981 taagcaatac tacagtcttt gcaggtatta atgaagtttt tgcagtaaca aataatacta
     2041 ctgattttgg tggtaatact gcattgtcca ataatacaat tctagtaaaa ccatcatcat
     2101 tagaagcaga acataaagaa gtacatgaaa aattagagaa aatagtttca tcttcaggag
     2161 atacagcaaa tattgcaaag caagtacaat ctataatgca accacatttt gaaaaagaag
     2221 aacaattatc aattccagta cttggagcat tacaacccta tgttaatgga atactaactg
     2281 aaagaacaaa aaatcaagca atacaaatat ctcaacagtt caagcaagaa taccctacta
     2341 tgcttgagga gcataagcaa atagttgctg cactagacaa cttggaaaat actgccatga
     2401 aagagaatag gcaagatgta atatcattta ttgcagatct taagagccat gcaatgaatg
     2461 aagaacaagt aacatatcct gctacaatag ttataggaga gttattggaa ttaaagaaat
     2521 aaaaaaaatc tgcaagttct atctttatat tgcgtagtct ctttatctga gaatctaaac
     2581 aattctgcat ctttatacat tttttatata cgatagtatc atttcttgac ttgtttgaat
     2641 atgtattccg ccttaatgag atgcaaatga tagataagat agtatggaaa cgctggaagg
     2701 tacttacgga aacaatcatg acaataccaa agtttagaag catctggatc aagacaaagg
     2761 aatcacatcc agataaggac tttg
//
LOCUS       DATIAS010000735         2670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1493612, whole genome shotgun sequence.
ACCESSION   DATIAS010000735 DATIAS010000000
VERSION     DATIAS010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1493612"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="VLA74_14745"
     CDS             <1..679
                     /locus_tag="VLA74_14745"
                     /inference="COORDINATES: protein motif:HMM:NF015406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HSF52014.1"
                     /translation="KFGICSIREAYSAIQKELGFNHHLIRQLYWRDFYVYIGFHFPFV
                     FNSPFQERYRRNVIEWKNEPKEFELWCNGKTGFPIVDAGMRELNETGYMHNRLRLITA
                     SFLVKDLHIDWRYGERYFGLKLFDYNPSINNGNWQWVASTGCDAQPFFRIFNPWLQQK
                     KFDPDCIYIKKWISELKEVPINTIHEWYKANSVIDKSTNSSSRDYPKPIVEHQKEITI
                     TRELYNI"
     gene            complement(901..1329)
                     /locus_tag="VLA74_14750"
     CDS             complement(901..1329)
                     /locus_tag="VLA74_14750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52015.1"
                     /translation="MVKNFFILVLVITGLLGSVTVSSNINPQKDLNFQYGNYPKNLAE
                     TVENASKDPNNIEMKLLQCVTFVNSASRGETREIYNQTWFDIQSIIRLELSLDVKVNG
                     IAVEWNAIDTSNSPIPNAIDLCAKTYEETGKFIQELEEWT"
     gene            complement(1393..1992)
                     /locus_tag="VLA74_14755"
     CDS             complement(1393..1992)
                     /locus_tag="VLA74_14755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52016.1"
                     /translation="MNTIQQVFVSSGCTIFLTLTFLLSSDNDVFAIEFSNYTSEKYGI
                     QFEYPTDWKINEKSRFDSGPDMMIADFSSSRSFNLGFPISSGGSLANVLDILGFEKVI
                     ELALHIATKRFEEAYEAKIIEEPSMMSIDGKETVTFLVTSEDKYEHYAVKYARQFWIT
                     NVNDKLYAFKFIAPTTIFDDPENIEIRDHFIYSIKFLVR"
     gene            2468..>2670
                     /locus_tag="VLA74_14760"
     CDS             2468..>2670
                     /locus_tag="VLA74_14760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52017.1"
                     /translation="MVPNIVVYAYNAIHEYQESEESKTEGLIEKSAEQRAEFVLFAGI
                     ATIYAVSTFFVVRYRNRTLPYYI"
BASE COUNT          950 a          379 c          379 g          962 t
ORIGIN      
        1 taaatttgga atatgttcta ttagagaagc atattccgca atacagaagg aattgggttt
       61 taatcaccat ttgataagac aattgtattg gagagatttt tatgtgtata taggatttca
      121 ctttcctttt gtatttaata gtccttttca agaaagatat agaagaaatg ttattgaatg
      181 gaaaaatgaa ccaaaagaat ttgaattatg gtgcaatgga aaaactggtt ttccaattgt
      241 agatgcagga atgagagaac tgaatgaaac aggttatatg cataatagat taaggctaat
      301 tactgcttct tttttagtaa aagatttaca tattgattgg agatatggag aaagatattt
      361 tggattaaaa ctttttgatt ataatccctc tattaataat ggcaattggc aatgggtagc
      421 ttcaactgga tgtgatgctc aacctttttt cagaatcttt aatccatggt tacaacaaaa
      481 aaagtttgat ccggattgta tttatataaa aaaatggatt tcagaactta aagaggttcc
      541 tattaataca atacatgaat ggtataaggc taattcagta attgataaat caactaattc
      601 ctcttcgaga gattatccta aaccaatagt ggaacaccaa aaagaaatta caattacaag
      661 agaattatat aatatctaat atattactaa tgacaaattt ataattactc gatcgatatt
      721 ttcacaaata attaatatgc gtttagctaa ttatactact atataattaa tttattttgt
      781 tgacttatcc attatttaaa aacgttgttg ataatctgta ggtgttaaat aggaagaata
      841 ctatctggca tcatcaaata cattagttat tcatcgatct atgtcaagaa tttacatcat
      901 ctatgtccat tcttccaatt cttgtatgaa tttacctgtt tcttcatatg ttttagcaca
      961 taaatcgatt gcatttggta tcggtgagtt agacgtatcg attgcattcc attcgactgc
     1021 aattccattt acttttacat ccagagatag ttcaagtctg attatagatt ggatgtcaaa
     1081 ccatgtttgg ttatatattt cgcgtgtttc tccacgtgat gcactgttta caaatgtaac
     1141 acattgtagt aatttcattt ctatgttgtt tggatctttt gatgcatttt ctacagtttc
     1201 agctaaattt tttggatagt ttccatattg aaaattaaga tctttttgtg gatttatatt
     1261 tgaggagacc gtgacgcttc ccaacagtcc agttataact aggaccaaaa taaaaaaatt
     1321 cttcaccacg tactttttac gcaaattagc taataaggtt tttttaattg tttgtttttt
     1381 gattgataat tattaccgaa ctagaaattt aattgaatat ataaaatggt cacgaatctc
     1441 tatattttct ggatcatcaa aaattgtagt aggggctata aatttaaaag cgtataattt
     1501 atcattaaca ttagttatcc aaaattgtct agcatattta acagcataat gctcatattt
     1561 atcttcgcta gtaaccaaaa aagttacagt ttctttacca tcaatagaca tcatcgatgg
     1621 ttcttctata attttagctt catacgcttc ttcaaacctc ttagtagcaa tatgaagagc
     1681 tagttcaatc accttttcaa atccaagaat atctaatacg ttcgctaatg atcctcccga
     1741 ggaaatcgga aaccctaggt tgaaacttct acttgacgaa aagtctgcta tcatcatatc
     1801 aggtccacta tcaaatctag atttttcatt aattttccag tcagttggat attcaaattg
     1861 aattccatat ttctcacttg tataattaga gaattctatt gcaaaaacat cattatctga
     1921 agatagtaaa aaggtcaaag ttaaaaaaat agtacatcca gatgatacaa atacttgttg
     1981 tattgtgttc atcaatcgta taaaatgttt atctgacgga taaactttta tttatgactg
     2041 ttcatcttaa cgaagccata caaaaatcga taaatatttt aaatatagca actcctcatc
     2101 attttcaaat ttggagaatt gagtaggtat ttctgcttga ccagatgaat tctgagatac
     2161 taaaaagaaa agagtaaaat tgtcatttca tttcaatatt tcatttcatt attaattaat
     2221 taactaacta ataagaaaat aactaactaa taagaaaatt tattagccga agttaataat
     2281 ataatttttt atttattatg ggattgaata agacacatat tttaaccatt ttatattttt
     2341 atttttatta tactacatac cactttaaat aaatgctgta tgaggcataa atacaaaaac
     2401 aaattttaac aacggataac aaaaggaaaa acttcccaat attctactag ttctctttat
     2461 cgtattaatg gttccaaata tagtagttta tgcatacaat gccattcatg aatatcaaga
     2521 atcagaagaa tcaaaaacag aaggattaat agaaaaatca gcagaacaaa gagcagagtt
     2581 tgtattgttt gcaggtattg caactatata tgcagtatct actttttttg tagtacgcta
     2641 tagaaatcgt acattacctt attacataat
//
LOCUS       DATIAS010000736        12795 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1766043, whole genome shotgun sequence.
ACCESSION   DATIAS010000736 DATIAS010000000
VERSION     DATIAS010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 12795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12795
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766043"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1509
                     /locus_tag="VLA74_14765"
     CDS             <1..1509
                     /locus_tag="VLA74_14765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSF52018.1"
                     /translation="MYKKFSTYWKDGKGAHAPNVMVDKCACPTNCGLCTNHLSHSGLS
                     NMIVTNRCDLTCWYCFFYVKKGLEGAYLYEPNYEQIRAMMKTLKAERPIAGNSIQITG
                     GEPMLRDDITEVIKIMKEEGVDHVQLNTNGIKLAMSPETMRQVRTAGVSNLYLSFDGV
                     TPRTNPKNHWEIPYTLESARKCGMTVVFVPTVIKSINDHELGGIIRYAQKNMDVVHAV
                     NFQPVSLTGRMNKKEREKYRITIPDCIERIEEQTNGEISTDSWFPVPSCMPMTDVIEA
                     FSKKPKYELSIHFACGAGTYVFEDVQTKKLTPLTSFVDIKGLLEYFEEKADEIRSGAN
                     RYWTTLEVVRKLNQFVDKTKQPHGLNLARMFSSILLKRNFDAVGSWHVRSLFLGMMHF
                     QDKYNEDLERLQRCDIHYLTPDLRIVPFCAFNVIPEWYRDRIQKKYSIPVEEWEKAHG
                     ETLEAGLYRGLMRRGKPEAQMGCALSEMHKAAAESEMQDHKAVELRSGMAGA"
     gene            1643..2506
                     /locus_tag="VLA74_14770"
     CDS             1643..2506
                     /locus_tag="VLA74_14770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSF52019.1"
                     /translation="MSTMKYVLLEPMGEIAIIKINRPDALNSMNLDVIWELSKTIDIV
                     GTDESIKAVIITGSGERSFCAGADIAYMVNINPVEAEKYASSAQSVLNKIEKLEKPVI
                     AAVNGFALGGGCELALVCDIRIASSNAKIGQPEVTIGIPPGWGGTQRLLRIVGPSKAK
                     ELIFTGKMISAEEAYEIGLINILVKLTHEDTIPDEVPQDDVVKVKEREKEIAKVLNTK
                     LLNQAISLTKEITKNSYNAIKASKLLINKGMDMDIDSGLRMEIYAWALCFAHEDRQKL
                     MSAFLNKSKKK"
     gene            complement(2575..3534)
                     /locus_tag="VLA74_14775"
     CDS             complement(2575..3534)
                     /locus_tag="VLA74_14775"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HSF52020.1"
                     /translation="MTESFCIATAPSSTANLGPGFDTFGLALNLFEDEVKVIKKQSKN
                     QKITINKIIQSEPKIPIEIEHNSSSIVVKKMAEDFRIQNDIEIEIRKCVPAGYGIGSS
                     AASSVAAAYAFNELFALQLDKKRLVEYAAEGEIASAGTKHYDNVACSLLGGFVIVRTF
                     PKIDLIKIEPPNDLNIVVGIPKIPVPKKKTEAARNILPQSVPLENVIKNIANASTIVA
                     GFALKDVEMISRGMEDTIVEPVRKKMIPGYDVVKKYALNAGALAFTISGAGPSIVAIL
                     KTDKNSDKIINAIEKGFNDSNINNEVYLCKPSDGAKVIQTNEY"
     gene            complement(3537..4295)
                     /locus_tag="VLA74_14780"
     CDS             complement(3537..4295)
                     /locus_tag="VLA74_14780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HSF52021.1"
                     /translation="MNAIFITGTAGSGKSLLTSRLDQWYKARDNLSITLNLDPAVENL
                     PYNPDIDIRDYIDINELKERYSLGPNGSIIMAYDLVATKIGEMQIEIDRLSPDYLLVD
                     TPGQIELFSYRSSGPYIVANINSENKATIFLMDGVLVSSPINFVSLSLLSASINLRLR
                     TPQINVLSKKDLILNDLENILEWSSSDSALREALDKENDFEFSLLSKDIIRNLSENAL
                     GNELIAVSNVTMNGFIDLSATLSRILNQGEEIQY"
     gene            complement(4435..4575)
                     /locus_tag="VLA74_14785"
     CDS             complement(4435..4575)
                     /locus_tag="VLA74_14785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52022.1"
                     /translation="MTERIKGNNPTLKISFIDIGEKMNNKMIGRRLTIMAMNRQFNIS
                     NQ"
     gene            4553..5488
                     /locus_tag="VLA74_14790"
     CDS             4553..5488
                     /locus_tag="VLA74_14790"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSF52023.1"
                     /translation="MPFILSVIFSLGKIFLQSYRFKYFVDNFLGYKISSTSKLMSIRV
                     GSEFVTNTTPSYVGGEIIRIAWLTRNNVPAGIAAWIATMEIIADVFVGTTLALIAGII
                     ALYHGATLIGLITILVSVLVLGFWLLVVIFSAKYDIQLPNFVTKLIKKFLSKERSGKI
                     INYTNSAIRELCTMSKENFNSSKTLKIFFVGIFLTFLAFVCHGASFLILGELVESNLG
                     LFDSILATAASTQLGSLPITVGGSGITELGLWAYVSDLNHIPSLNDVLGDSHLKVIIS
                     WRIASYHIPLIIMWIVLMRITVDKGITSKKKKLSE"
     gene            complement(5620..6057)
                     /locus_tag="VLA74_14795"
     CDS             complement(5620..6057)
                     /locus_tag="VLA74_14795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52024.1"
                     /translation="MPRTKSSSKTSEREGIPQWVEDEIRSIELGESEILNRTGYILET
                     YYNDNKLDIQLYESLPDGRTIIEGIGIPKSQDISDCMKGFVYEFKIKMSKGKLSEKTR
                     EFLKIQYMLEMDHIYQFELIELQLMDVESEEAIKEPTDVDDEA"
     gene            complement(6672..7235)
                     /locus_tag="VLA74_14800"
     CDS             complement(6672..7235)
                     /locus_tag="VLA74_14800"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSF52025.1"
                     /translation="MDYVNTDTMDKIANEIKICTLCTLSDSRKNAVPGEGEFRKKLMI
                     IGEAPGFNEDQSGRPFVGMAGMILRKTLTKCGIDIEDVFITNIVKCKPPNNRQPKNHE
                     KDTCSKYLARQINLLKPKIICILGNVAGSYILDIKSISQHRGKILRKNGIDYFITYHP
                     AATIYNRNLILDFENDIKHLAEIINKN"
     gene            7634..8305
                     /locus_tag="VLA74_14805"
     CDS             7634..8305
                     /locus_tag="VLA74_14805"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52026.1"
                     /translation="MIIDNCFFPDDLLYDMENFVWVDISNKNSIKLGITPIMSSISGR
                     VFSVKLKEKNVIIAKGKSVGSIESLKYFGIVRSPISGKIETGNNRIIEKPKLVNDSPY
                     EQGWFVTIYPTNLENELKYLKKANDCRARFKIVIKDLNVRCFKYFPDYELYEIGSECV
                     ATLMKLDDLLSRIKVGEIVYLVSDDVTADIELQRWSLENSQSVVDIRKEKNLFHFLIR
                     KQKDV"
     gene            complement(8321..9163)
                     /locus_tag="VLA74_14810"
     CDS             complement(8321..9163)
                     /locus_tag="VLA74_14810"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HSF52027.1"
                     /translation="MEYANPNVLVDTKWVEEHLNDDKVRIAEVDYDPKTNYFLGHIPN
                     SVLFDWKNDINDPDTRNIISKEDCLNLLQKAGINDDTTIVLYGDFNNWFAAFAFWVFE
                     YYGLKNVKIMNGGRKKWLEEDRPISKEIPTFTTGNILPAEPDLNLRSFLNQVKDSLQS
                     EKTVRIDVRSPAEFSGLITAPPEYPTEHAQRGGHIPGAINIPWAKAVNEDGTFKSADD
                     LLNLYQSAGITPDKEVITYCRIGERSSHTWFVLRHLLGYKDVKNYDGSWTEWGNMIAN
                     PIEK"
     gene            9260..9589
                     /locus_tag="VLA74_14815"
     CDS             9260..9589
                     /locus_tag="VLA74_14815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTPase"
                     /protein_id="HSF52028.1"
                     /translation="MDKLDYIFQMQKDLEKYVATTRYPNKPEDRISALSVAIIHEAVE
                     LQRLTNWKWWKTPVDFDLKLAKEELIDILHFVIQVSIELGMSPSEILQEFSKKHSVNM
                     KRQKTNY"
     gene            complement(9579..10079)
                     /locus_tag="VLA74_14820"
     CDS             complement(9579..10079)
                     /locus_tag="VLA74_14820"
                     /inference="COORDINATES: protein motif:HMM:NF016124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52029.1"
                     /translation="MTTERSSIRSEFDKILGICCYYLIPIKKQYFLGEGSHIAICTLS
                     SLKLLEKIGKDREIMNKISIVGRLLSENRGIDQIIKFTEENKKIHTILMCGKDVRGHF
                     SGQALISLKKNGINRQKRIIGAKGSYPILSCTEEHIENFRNKIELIDKIGLTDFRKIK
                     SIVASN"
     gene            complement(10109..11074)
                     /locus_tag="VLA74_14825"
     CDS             complement(10109..11074)
                     /locus_tag="VLA74_14825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52030.1"
                     /translation="MNSDSLPMQNKHVILQNWNDEKVLMSDIITNIFNLLNFHDNNIK
                     SEITEILRNNQKSNPSDKWFDALKLISIYCVQNNFTFSQSQIYDLLTIFSRIVDEKKK
                     DVVNTVTFNVYRDVMENHYKINEKLKLIFPVIIVNLMHIIKYGKDIEGNSVNLFSINN
                     YYQNSKSNLEQQLLKIRSFDLQGGRGVSIKNQIIKILELVTGRNEKDLQNSYSNLQES
                     DQKKLIELCNNYQKIQEFSKLIETEKFSDAIERQAGRKLSESQLQHAANSIKKTKLYL
                     EKVLDGGFAPKGKHGINHVKHNIEYGFQLMGIIQSKRRKQEIKNN"
     gene            11220..11753
                     /gene="cobO"
                     /locus_tag="VLA74_14830"
     CDS             11220..11753
                     /gene="cobO"
                     /locus_tag="VLA74_14830"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HSF52031.1"
                     /translation="MKTNGLVLIYTGKGKGKTTAALGIVLRALGHGLKVLMVQFIKGE
                     WYYGELSSSKRLEPEFELIAAGRGFIGILDDDHEFEEHKRAATDAIVLAKEKILSRAF
                     DIVILDEINYAIKLNLITIDEVMELIDVKPKETSLVLTGNYAPKEIIQVADLVTEMKE
                     IKHPYRLGVKAKEGIDY"
     gene            12080..>12795
                     /locus_tag="VLA74_14835"
     CDS             12080..>12795
                     /locus_tag="VLA74_14835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HSF52032.1"
                     /translation="MEELKNIPEEGDIVFANVKQVTNHGAYVSLEEFGNMTGFLHISE
                     IATGWIRNIERYVRPNQKIVLKVIRVNKTRSEVDLSLKQVSGEEKKSKIIEVKKNEKA
                     NAFMKIIQDKANLSDDQIRQIEDKILTKYDYVYDLFEAVAKKGIEILTPFELSEEIIK
                     TIEEESNKIPIPHVEIRGIVEISSQKPNGVEIVKSILNSVETTKGNVKILISYIAAPK
                     YRLVVAADNFKLAEKALNIC"
BASE COUNT         4275 a         2024 c         2021 g         4475 t
ORIGIN      
        1 atgtacaaaa agtttagtac ttattggaaa gatggtaaag gtgctcatgc tcccaatgtt
       61 atggtagata aatgtgcatg tccaacaaat tgtggattat gtacaaatca tttatcacat
      121 tctggattat ctaacatgat agtcaccaac agatgtgatt tgacatgttg gtattgtttc
      181 ttttatgtca aaaagggtct tgaaggtgca tatctctatg aacctaacta tgaacaaatt
      241 agagccatga tgaaaaccct taaagcagaa agaccaatag caggaaattc aattcaaatc
      301 actggtggtg aaccaatgtt acgcgatgat ataaccgaag taataaaaat tatgaaggaa
      361 gaaggagtag atcatgttca attaaatacc aatggtatca agttagcaat gtcaccagaa
      421 acaatgcgtc aagtaagaac agctggtgta agcaatcttt acctttcttt tgatggtgtt
      481 actccgcgga ctaatcctaa aaaccattgg gagataccat atactcttga atctgcacga
      541 aagtgtggaa tgaccgtggt ttttgttcca actgtaataa aatctataaa cgatcacgaa
      601 ttgggaggaa taattagata tgctcaaaag aacatggatg ttgttcatgc agtcaacttc
      661 caacctgtat cacttactgg tagaatgaac aaaaaggaac gagaaaaata taggataaca
      721 atccctgatt gtattgaacg aatcgaagaa caaaccaatg gtgaaatttc aacagattct
      781 tggttcccag ttccatcttg tatgccaatg actgatgtaa ttgaagcatt cagtaaaaaa
      841 ccaaaatacg agttatctat tcactttgct tgtggtgcag gtacatatgt attcgaagat
      901 gtccaaacta aaaaattaac tccactaacc tcttttgtag atattaaggg cttattggaa
      961 tactttgaag aaaaggccga cgaaatacgt tccggtgcta atagatactg gacaactcta
     1021 gaagttgtac gtaaattaaa tcaatttgta gataaaacaa agcaacctca tggattgaat
     1081 ttagcgagga tgttttctag catattatta aaacgtaatt ttgatgcagt gggttcatgg
     1141 catgttagat cacttttcct tggtatgatg catttccaag ataaatataa tgaagattta
     1201 gaaaggttac aaaggtgcga tattcattat ctgacaccag atcttagaat agtgcctttc
     1261 tgtgcattca atgttattcc agagtggtat agagatagaa ttcaaaagaa atatagtatt
     1321 ccagttgaag agtgggaaaa agctcacggt gaaacgttag aagctggact gtatcgagga
     1381 ttaatgagac gtggtaaacc agaggcacaa atgggttgcg cattatcaga aatgcacaag
     1441 gccgctgcag aaagtgaaat gcaagatcat aaggcggtag aattaagaag cggtatggcc
     1501 ggagcataaa tatcgtttta accatttttt ttgaagatta tatcacagct attaattttg
     1561 tacgcttgat tctataattt atttaattta accatatttt attcaataaa ctttaattta
     1621 tgtatgataa tcgaataata ttatgtctac catgaaatat gttcttctgg aacctatggg
     1681 tgaaattgca attattaaga tcaacagacc tgatgcatta aattccatga atcttgatgt
     1741 aatatgggaa ttatctaaaa ctattgatat tgttggaaca gatgaatcta ttaaggcagt
     1801 tattataaca ggctctggcg aaagatcatt ctgtgctgga gccgatatcg cttatatggt
     1861 taatatcaat cctgtagagg cagaaaagta tgcatcttct gctcaatcag tgttgaacaa
     1921 gattgaaaaa ttagaaaaac cagtaatcgc tgctgtaaat gggtttgcat tgggtggcgg
     1981 atgtgagtta gctctcgttt gtgatattcg aatcgcgtca tctaacgcaa aaataggaca
     2041 accagaagta acaataggca taccccctgg ctggggtggt acgcaaagac ttctgagaat
     2101 agtgggacca tccaaagcga aagaattgat ttttactgga aagatgatta gtgcagaaga
     2161 agcttatgaa ataggattaa taaacatttt agtaaaattg actcatgaag acactatccc
     2221 tgatgaagta cctcaagatg atgtagttaa ggtaaaggaa agagaaaaag aaatcgcaaa
     2281 agttctaaat actaagttac ttaatcaagc tatttctcta acaaaggaaa tcacaaagaa
     2341 cagttataac gctatcaaag ctagcaagtt gctaattaac aagggtatgg acatggatat
     2401 tgattcaggc ctaagaatgg aaatatatgc atgggcgcta tgttttgcac acgaagatag
     2461 acaaaaactt atgtcagcat ttttaaataa aagtaaaaag aagtaaaatt agaactaatg
     2521 aagaacagca ataatagtca ctaataaaag attctaaata caaaataata actatcaata
     2581 ttcatttgtt tgtataacct ttgcaccatc actgggttta cagaggtaaa cctcgttatt
     2641 tatatttgaa tcattaaatc ctttttcaat cgcattaatg atcttatctg aatttttgtc
     2701 cgtttttagt attgctacaa ttgatggacc tgcaccacta atagtgaaag ctaatgcacc
     2761 tgcattaaga gcatattttt tcactacatc ataccctgga atcattttct ttcttacagg
     2821 ctctactatc gtatcttcca tacctctaga aatcatttct acatccttta aagcaaatcc
     2881 cgcaactatg gtgctagcat tagctatgtt tttaataaca ttttctaatg gcacactctg
     2941 tggaagtata ttccttgcgg cttctgtctt tttttttggt actggtatct ttggtattcc
     3001 tactacaata ttgagatcat ttggtggttc gatttttatt aaatcaattt ttggaaaagt
     3061 tcttactatt acaaatcccc ctagcaatga acatgcaaca ttgtcataat gtttggtacc
     3121 tgcagaagcg atctctcctt cggccgcgta ctccaccaac ctcttcttat ctagttgtag
     3181 cgcgaataat tcattaaatg catatgccgc ggcaactgaa gaagcagcac tactaccaat
     3241 tccataacct gctgggacac attttctaat ctctatttct atatcatttt gtatcctaaa
     3301 atcttcggcc atttttttaa ctacaatgct agaagaatta tgttctattt ctatgggaat
     3361 ttttggttct gattgtataa ttttatttat tgtaattttt tgattctttg attgtttctt
     3421 tatcacttta acctcatctt caaataggtt taaggccaat ccaaaagtat caaatccagg
     3481 acctagatta gctgtggaag aaggtgcagt agcaatacag aaactttctg tcatgatcaa
     3541 tattgaattt cttccccttg attaagtatt cttgataatg ttgcagatag atctataaat
     3601 ccattcatgg ttacatttga gactgcaatc aattcattac ccagagcatt ttcagaaaga
     3661 tttctaataa tatccttgct aagtaatgaa aactcaaaat cattttcttt atctaatgct
     3721 tctcttagag ctgaatcaga agatgaccat tccaaaatat tctctaaatc attcaaaatt
     3781 aaatcttttt ttgataatac attaatttgc ggtgttctta atcttagatt aattgatgca
     3841 gataaaagtg atagcgatac aaaatttatt ggtgaggaaa ccaaaacccc atccatcaaa
     3901 aatattgttg ccttattttc tgaattaata ttagcaacaa tataaggtcc actggatcga
     3961 taggaaaaaa gttcgatttg accaggagta tccactaata ggtaatctgg acttaatctg
     4021 tctatctcta tttgcatctc tccgatcttt gtcgcaacca aatcatatgc catgattatc
     4081 gagccatttg gtcccaaact atatctctct tttaactcat tgatatctat gtaatctcga
     4141 atatctatat ctggattata tggtaaattc tctactgccg gatccaaatt cagtgtaatc
     4201 gataaattgt cacgagcttt ataccattgg tcaagcctag aagttaataa tgactttcca
     4261 gagccagcag ttccagtaat aaaaatcgca ttcatatgtt attattcttt aattttcaaa
     4321 tatcaggatt ttaattaata tcttcctgta ggatatatgt atgatgtcat ggtaatatca
     4381 attaatcata aattatatta ttaaattgat tgattattat atacctaaat tagtttactg
     4441 attagagata ttgaactggc ggttcatagc cattattgtt agtcttcttc ctatcatttt
     4501 attgttcatt ttctctccga tatcaataaa agatatcttt agtgttggat tgttgccttt
     4561 tatcctttcg gtcattttta gtttagggaa gatattttta caatcatata ggtttaaata
     4621 ttttgtagac aattttttag gatataaaat ctcttctact tccaaactta tgtcaataag
     4681 agtaggcagt gaattcgtta ccaacactac tccttcgtat gttggtggag aaattattag
     4741 aattgcttgg ttgacacgaa ataatgttcc tgctggtatt gctgcatgga ttgctacaat
     4801 ggaaataatt gctgacgtat ttgttggaac gactcttgca ttgattgcgg gaataatcgc
     4861 cctttatcat ggggcaacat tgataggtct tatcacaatt ttggtctctg ttttggtttt
     4921 aggtttttgg ttactggtag ttattttttc agccaaatat gacattcaat tgcctaattt
     4981 tgttacaaaa ttaattaaaa agtttttgtc taaggaaaga tcaggtaaaa ttatcaatta
     5041 tacaaattct gctatccgtg agctctgtac tatgagcaaa gaaaatttta actcctcaaa
     5101 aacattaaag atattctttg ttggtatttt tcttacattt ttagcatttg tatgtcacgg
     5161 agcgtcgttt ttaatattag gggaattggt agaatccaat ttgggattat ttgattcaat
     5221 actagctact gctgcttcga cccagctagg cagtttacca ataactgttg gaggttccgg
     5281 gataacagaa ctgggtcttt gggcttatgt ttctgatctc aatcatatac catcattaaa
     5341 tgatgtttta ggagattcgc atttaaaagt aataatatct tggaggattg cctcttatca
     5401 tattccattg attataatgt ggattgtctt gatgagaata acagtcgata aggggattac
     5461 ttctaaaaaa aagaaattat ctgaataagt attaccacga taatagtttc tagtttcaag
     5521 caaaagaaaa taaaaaaaaa caaaattcga aatacaaaaa taatttttaa agtattaaat
     5581 tttatatatt tatatattta tatggaacta ttatattccc tacgcttcat catcaacatc
     5641 tgtaggctct ttaattgctt cttcagattc aacatccatc agttgtaatt caattaattc
     5701 aaattgataa atgtgatcca tttctaacat atattgtatc ttgagaaatt ctctagtttt
     5761 ttcactaagt tttccctttg acatttttat cttaaattca taaacaaatc ctttcataca
     5821 atcggaaata tcttgagatt ttggaatccc aattccctct ataatggttc gaccatcagg
     5881 taatgattca tataattgta tatctaattt attatcgttg taatatgttt ctagtatata
     5941 tccagtccta tttagtattt cagattcacc taattcgata gatcttattt catcctccac
     6001 ccattgagga attccttctc tttctgatgt tttgcttgag cttttggttc tcggcatttt
     6061 atttattatt agaatattta actagataaa agttttccat atcataatca agtttctcga
     6121 gagtcaatct taaaatatat ttctaatagc atattttcct atatttttct aatataccta
     6181 aatttaatat tgttcttgtc aaataaaaat aattgctttt gagtcgcgaa atagggttca
     6241 atttttttca taaataataa gataattctt gtccaagaaa atcacctatg ctattggtgc
     6301 aaaatgatct ggacttctac ttgtttctct atcaatccat gttatataca gattttcaga
     6361 tttctctacg aattttactg ctactatata ctcttcaaca ttattgaaga gtttgaaaaa
     6421 tgttcataag caaagtacgc tttctcataa acaatagaaa aatttttatc gttttttagc
     6481 attataaaac catatcagga tgtttgtgca gagttataag gattgcgcct cccatcaaat
     6541 aagtctacaa atactcgatc agatgcatag aataacacat cgaaaatttt caatgatagt
     6601 tttcaacgat gaatagatat ttcattttta aaaacttcct tggagaaacg catattatct
     6661 tatgctgatt cttaattctt gtttataatt tccgctaaat gcttaatatc attttcaaaa
     6721 tccaaaatca gattcctatt ataaattgta gctgcaggat ggtatgttat aaaataatct
     6781 attccattct ttcttaaaat ctttcctcta tgttgactta ttgatttgat atctagaata
     6841 taagagcctg caacgtttcc caatatgcat attatttttg gttttaaaag attgatttgt
     6901 ctagcaagat attttgaaca tgtatctttc tcatgattct taggttgtct gttgtttgga
     6961 ggtttacatt ttacaatatt tgtaataaat acatcttcaa tatcaatacc acatttcgtt
     7021 aatgtttttc tcaagatcat tcctgccata cccacaaatg gtcttccact ttgatcttca
     7081 ttaaatcccg gagcttcgcc tatgatcatt aatttttttc gaaattctcc ttcgccaggt
     7141 actgcattct ttctactatc tgaaagtgta cataaggtac atattttaat ctcatttgct
     7201 attttatcca ttgtatcagt attaacataa tccattatat cttttagaaa ctagaatatc
     7261 tttttaatgt tatattaaat attctttttt actatctttt aaatttatat caaaatcgaa
     7321 aactatgaga catgtaattc cttatgttac acaacttgga caagtggcga tctagataat
     7381 atggtattat tttagcatag atatttttgt aatggataat taaggtttat gattagacat
     7441 gtaatagata aatcgataat aaatcatatt taaaccacgt caataaatag aatgttttct
     7501 acacagtcac gttaatgtta gataaatatc actcttattt gagtatacca tatcctcaag
     7561 atatctattc ctatttcaga atatttcgta atggacataa agactcaaat tggttcgaga
     7621 attacatcga aatgtgatta tagataattg tttttttcca gatgatcttc tctatgatat
     7681 ggaaaatttt gtctgggttg atatttctaa taaaaactcc atcaagttag gtataactcc
     7741 aataatgtcc tctatttctg gtagagtgtt ctctgttaaa ttaaaagaaa aaaatgtcat
     7801 aattgcaaag ggaaaaagtg tcggatcaat tgaaagttta aaatattttg gaatagtaag
     7861 atctccaatt tctgggaaaa tagaaactgg gaataacaga atcattgaaa aaccgaaatt
     7921 ggtaaatgat agtccttacg aacaaggttg gtttgtaaca atttatccta caaatttaga
     7981 aaatgaatta aaatatctaa agaaggcaaa cgattgtcgt gcacgattca aaatagtaat
     8041 aaaagatctg aatgttcgtt gtttcaagta ttttccagac tacgaattat atgaaatcgg
     8101 atcggaatgc gttgcgacac tcatgaaatt agatgatttg ttatcaagaa ttaaggttgg
     8161 tgaaatagta tatttagttt ccgatgatgt gacagcagat attgaacttc aaagatggtc
     8221 attggaaaat tcccaatccg ttgttgacat cagaaaagag aaaaatcttt ttcatttttt
     8281 gatacgaaaa caaaaagatg tttaaaactt gtattgtatt ttatttttct attggatttg
     8341 ctatcatatt tccccattct gtccatgagc cgtcataatt ctttacatct ttataaccca
     8401 acaaatgtct taaaacgaac catgtgtgag atgaacgttc tcctattctg cagtatgtaa
     8461 ttacttcttt gtccggcgta attccagctg attgatatag atttaaaaga tcatcggcag
     8521 atttgaatgt cccatcctca tttactgcct tagcccatgg aatatttatg gcaccgggga
     8581 tgtgacctcc tctttgtgca tgttcagttg ggtattcggg cggtgccgtg atcagaccac
     8641 taaattctgc gggacttctt acatcaattc ttacagtctt ttctgattgt aaagagtctt
     8701 taacctgatt taaaaaagac cttaaattta agtctggttc agcagggagt atatttccag
     8761 tagtaaatgt aggtatctct tttgaaattg gtctgtcttc ttctaaccat tttttcctgc
     8821 ctccattcat tattttaacg tttttcaaac cataatattc aaacacccaa aaagcgaaag
     8881 ctgcgaacca attgttaaaa tcaccatata aaactatggt agtatcgtca tttattccag
     8941 ctttttgcag caagttcaag caatcttcct ttgaaataat atttcttgta tccggatcat
     9001 tgatatcatt cttccaatcg aataatacag aatttggtat gtggccaaga aaataatttg
     9061 tctttggatc ataatccacc tcagctatac gtactttgtc atcattaaga tgttcttcta
     9121 cccactttgt atctacaagt acattaggat tagcgtactc cattagtaat gtaattaaaa
     9181 cagtgttata aaaattaaat cttctaaaat gcctttatgt agctaaatta gttaaatatc
     9241 tgaaatttac atttaccata tggataaatt agattatatt tttcaaatgc aaaaggatct
     9301 agaaaaatat gttgctacta ctagatatcc caataaacca gaagatagaa tttcagcttt
     9361 gtctgtcgca ataattcatg aagcagtaga gcttcaaaga ttaacaaatt ggaagtggtg
     9421 gaaaacacca gtagattttg atcttaaact tgcaaaagag gaattgatag atatcctaca
     9481 tttcgttata caagtttcaa tagaactagg aatgagtcct tccgaaatat tacaagaatt
     9541 ttcaaaaaaa cattctgtaa atatgaagag acaaaaaact aattactagc tactatcgat
     9601 tttatttttc taaagtctgt taatccgatt ttgtctatta attctatttt attcctaaaa
     9661 ttttcgatgt gttcttctgt gcaggataaa ataggatatg aacctttagc accaattatt
     9721 ctcttctgtc tatttattcc attttttttc aaagaaatca gagcctgtcc tgagaaatgt
     9781 cctctaacgt ctttaccaca cattaaaata gtatgtattt ttttattttc ttctgtaaat
     9841 ttgatgatct gatctatccc tctattctcc gaaagtagtc tcccgactat cgatatttta
     9901 ttcataattt cgcgatcttt tccaattttt tcaagtagtt tcaaactaga taaagtacaa
     9961 attgcaatgt gactcccctc tccaaggaaa tattgttttt taattggaat caaataataa
    10021 caacaaattc caagtatttt atcgaattca gatcttattg aggatctttc tgtagtcata
    10081 tttttagagc ttatgtcaca tgaaattgtt aattgttctt gatttcctgc tttcttcttt
    10141 tcgattgaat tattcccatc aactgaaaac catattctat gttatgtttg acatgattta
    10201 taccatgttt tcctttaggg gcaaaacctc catctaatac tttttccaag tataattttg
    10261 ttttctttat agaattggca gcgtgttgta attgactttc ggacaatttt cttccggctt
    10321 gcctttcaat agcgtcacta aatttctctg tttcaattaa tttactgaat tcctgaatct
    10381 tttgatagtt attgcataac tcgattaatt ttttctggtc agattcttgt aaatttgaat
    10441 atgaattctg taaatccttt tcatttcttc cagttaccag ttctaatatt ttgattattt
    10501 gattcttaat agaaacacca cggccacctt gtaaatcaaa tgaccttatt ttcaggagtt
    10561 gttgttccaa gttagacttt gaattttgat aatagttatt tattgaaaat aaattgacag
    10621 aattcccttc tatatctttt ccatatttaa taatgtgcat cagatttaca ataattactg
    10681 ggaaaattag tttcagcttt tcattaattt tataatgatt ctccataaca tctctataaa
    10741 cattaaaagt tacagtattt acaacatcct ttttcttctc atcaactatc cttgagaata
    10801 ttgttaacaa gtcataaatt tgtgattgtg aaaaagtgaa attattctga acacaatata
    10861 ttgatattaa ttttagagca tcaaaccatt tgtcagatgg attagacttt tgattatttc
    10921 ttagtatttc tgtaatttcg cttttaatat tattatcgtg aaaattgagc aagttaaata
    10981 tattagtaat tatatcactc atcaagacct tttcgtcatt ccaattttgt aaaattacat
    11041 gtttattctg cattggtaga gaatcactgt tcataataat ccttaagatc taccttttta
    11101 tactaaagat ttctttaaaa acctattgga aattttgaga taatctagaa aaaatattaa
    11161 ttcgaatcaa caccataatt atatactaat atttcgctag atgatacgat atcctcaaaa
    11221 tgaaaacaaa tggacttgta ttgatttata ctggaaaagg caaaggaaaa actactgccg
    11281 cattaggaat agtattaaga gctctaggac atggtttgaa agtattaatg gttcaattca
    11341 ttaaaggaga atggtactat ggcgagcttt ctagttctaa aagactggaa ccagaattcg
    11401 agctaatagc agctgggcga ggattcatag gaatattgga tgatgatcat gaatttgaag
    11461 agcacaaaag ggctgcaaca gacgcaatcg ttctagccaa ggaaaagata ttgtcgagag
    11521 cattcgatat agttatcctt gatgaaatca attatgccat taaacttaat ctcataacaa
    11581 ttgatgaggt tatggaactc atcgatgtaa aacccaaaga gacttcacta gttttgacag
    11641 gaaattatgc tcccaaggaa attatacaag tagcagattt ggttactgaa atgaaagaaa
    11701 taaaacatcc atatagatta ggtgtaaagg ctaaggaagg gatagattac taaatattat
    11761 tttaaatccg tcattttaaa atgtgaagtt ctatcattgt tggattttca tagagatcgt
    11821 ctattgagta ataatatttg tgaaaactta ttagtaaacg aattagcaca aaatatatct
    11881 cattatgcgt gcaactgcaa aacaagaaca tccctagttt gatgtcgaaa ttaattaatc
    11941 atattcaaat atatgttaga tattaaattg aattacaaaa gtagtattca ttcactcaat
    12001 catgacttca ttcactgaat gatgacccag cctaaagtaa gaacataatt aatatgtcgt
    12061 ttattagggt taataaaaga tggaagaatt aaaaaatatc ccagaagagg gcgatatagt
    12121 ttttgctaac gttaagcaag ttactaacca cggtgcctat gtttccttag aagaattcgg
    12181 caatatgact ggatttttac atatttctga gatcgcaaca ggatggatta gaaatatcga
    12241 aagatatgtt agacctaacc aaaagatcgt tctaaaggta attcgagtca acaagacaag
    12301 atctgaagtt gacttgtccc taaaacaagt ttcgggtgag gaaaagaagt ccaagattat
    12361 tgaagtgaag aaaaatgaga aggcaaatgc ttttatgaaa ataattcaag ataaggccaa
    12421 tctatccgat gaccaaataa gacaaatcga agacaaaata ttgactaaat acgattatgt
    12481 ttacgacctt tttgaagcag tcgcaaaaaa aggaatagaa atacttacac catttgaatt
    12541 atctgaagaa attattaaaa cgatcgagga agaaagcaat aaaatcccca tccctcacgt
    12601 tgaaattaga ggtatagtag aaatttcctc tcagaaacca aacggggttg aaatcgtcaa
    12661 atcgatcttg aatagcgtgg aaacaactaa aggaaatgtc aagatattga tcagttatat
    12721 tgctgccccc aagtatagac ttgttgtagc tgcggataat ttcaaattgg ctgaaaaagc
    12781 tcttaatatc tgtat
//
LOCUS       DATIAS010000737         3696 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1357328, whole genome shotgun sequence.
ACCESSION   DATIAS010000737 DATIAS010000000
VERSION     DATIAS010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3696
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1357328"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VLA74_14840"
     CDS             <1..412
                     /locus_tag="VLA74_14840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSF52033.1"
                     /translation="IIKHYLKIVDLTDYSDSYIHQLSGGMKQRVSLARALALNPKILL
                     MDEPFAALDISIKNSLYKELLELHRRTRKTILFVTHNINEAVLLGDRVILMSPKLCSI
                     KKEYIIDIPKEERLNNLHIKNLIDQITLDLYEDD"
     gene            442..1266
                     /locus_tag="VLA74_14845"
     CDS             442..1266
                     /locus_tag="VLA74_14845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSF52034.1"
                     /translation="MESQIQSSKKKYNLSKNIVNKDTLSLIVFIVSFLALWQLVYMLE
                     IWPKVSLPSPFAVGQTIVDLLSDFTLVKGTAISLWRLFLGFLMSISIGLIVGLIMVKF
                     LHFGKTMSSFALGLQSFPSIAWIPFAILLIGFNDYGILFVVVMSSVFSVMLSTYSGIQ
                     NISPIYIKAAKNMGAKGFSLFRYVLIPAATPSLIIGMRQAWSFAWHALIGAEMLITTL
                     VGLGHILSVGREFSNMSQIIATMLVIFAIGLVFDRFVFSKIEEKVRDRWGLNQQQN"
     gene            1584..2657
                     /locus_tag="VLA74_14850"
     CDS             1584..2657
                     /locus_tag="VLA74_14850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSF52035.1"
                     /translation="MDKKIRSSENAILLISLAVMILFPILQQSFSQTGDKKILRIGYF
                     PNINHAQAVIGIGNGDFQKVLGNNIEIKSLVFNAGPSAIEALFAKQVDVTYVGPNPAI
                     NGYVVSGGEDIRIISGASSGGAVFIIRADSGIESTKDFANKKFASPQLGNTQDVALRN
                     YLIENGYKTTENGGNVTVLPAKNPDIVTLFLKKEIDGAWIPEPWGERLIKEANGKLFL
                     DERDLWPDGKFVTGLIVARSEYLKQNPDVIEKFLKAHVEETQWINNNKEEAIKAFNTE
                     LKKLTGQTIPEDTLKESLTRLELTYDPIQQSLYKSANDAFDIGFLGKTKPDLSNIFDL
                     NIQNKILEEKALVSINSTSSGIS"
     gene            3455..>3696
                     /locus_tag="VLA74_14855"
     CDS             3455..>3696
                     /locus_tag="VLA74_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52036.1"
                     /translation="MIIIIVTLSSMLIYNTNFNLKRDLSDQYETLLDFNNHNKKADAV
                     EFSDTAENSFEYIFDISEYLGFKGSKNITGSDNGDG"
BASE COUNT         1344 a          492 c          594 g         1266 t
ORIGIN      
        1 aataataaaa cactacttga agattgttga tttaactgat tattcggatt cctatattca
       61 tcaactttca ggaggaatga aacaacgagt ttctctggct agggcgctcg cgttaaatcc
      121 taaaatttta cttatggatg aaccatttgc tgctttagat atttcaatta aaaactctct
      181 ttacaaagag cttttagagt tacatagaag aactagaaaa acaattctat tcgttactca
      241 caatattaac gaagctgtat tgttgggaga tagggttata ttaatgtctc caaaattatg
      301 cagtataaag aaagagtata ttattgatat tcctaaagag gaaagactca ataatctaca
      361 tatcaaaaat ttaattgacc aaattaccct agatttatat gaagatgatt aaacaagact
      421 tgacgctgga gactaaaaag cttggaatca caaatacaaa gtagtaaaaa aaaatataat
      481 ctaagtaaaa acatagtaaa caaggatacg ttaagtttaa tagtttttat cgtaagtttc
      541 ttagctcttt ggcaattagt ttacatgtta gaaatatggc caaaagtatc tctaccatcg
      601 ccgtttgcgg taggacagac aattgtagat ttattatcag atttcacatt agttaaaggt
      661 acagcaattt cactatggag gttattttta ggttttctaa tgtctatttc aataggacta
      721 attgtaggtt tgatcatggt caagttttta cattttggga aaactatgag ttcatttgct
      781 ttaggtttgc agtcatttcc aagtattgct tggattccat ttgctatttt attaataggc
      841 tttaacgatt atggaatatt gttcgtagtt gttatgagtt ctgttttttc agtgatgctc
      901 tcaacttata gtgggattca aaatatttct ccaatatata taaaagctgc caagaatatg
      961 ggtgcaaagg gattttcatt atttagatat gtattgatcc ctgctgctac tccttctttg
     1021 attataggta tgaggcaggc atggtcattt gcttggcatg cactaattgg tgcagaaatg
     1081 ctaataacaa cgcttgtcgg attgggtcac atattatcag taggaagaga attctctaat
     1141 atgagtcaaa taattgcaac catgttggtt atatttgcaa taggtttagt ctttgataga
     1201 ttcgtttttt caaaaattga agaaaaggtg cgcgatagat ggggactaaa tcagcagcag
     1261 aattaacaat aatattttca aagaaaattt atttactaat aataaattgt taatagatga
     1321 tattagatat gaccttgata aatattatgt cacgattaca gtaaattatg tttataaaat
     1381 atatatatta tttactctat ttaatcacag attcattata gatacatatt tgacttgact
     1441 taaataataa ctttcaaatg ctatcatatt gttcccaaga ttctctactc aattttttag
     1501 ttagttaatg gaaaagaatg cgtataaatg tcaaattatg cgtattcaat agcattctta
     1561 tatagatttt accttgttta tttatggaca aaaaaattag atccagtgaa aatgcaatcc
     1621 tgttaattag tctagcagta atgatccttt ttccaatatt acaacaatca ttttctcaga
     1681 caggggataa aaaaatatta agaattggtt atttcccgaa cattaatcat gctcaagcag
     1741 taataggaat aggaaatgga gattttcaaa aagtattagg taataatatt gaaattaagt
     1801 ctcttgtatt taatgcaggt ccttctgcaa tagaagcgtt atttgccaaa caagtcgatg
     1861 ttacatatgt cggaccaaat ccagctatta acggatatgt tgtgtcaggt ggtgaagata
     1921 ttaggataat atcaggtgcc tctagtggag gagcagtatt cattattaga gcagattcag
     1981 gtatagaatc tactaaagat tttgcaaata agaaatttgc atcgcctcaa ctaggcaata
     2041 ctcaagacgt agcgttaaga aattatctta tagaaaatgg atataagacg acagaaaatg
     2101 gtggaaatgt taccgtttta cctgcaaaga atccagatat agtaacatta tttctgaaaa
     2161 aggagattga tggcgcatgg attccagagc cgtggggaga acgattaatt aaagaagcta
     2221 acggaaaatt attcttagat gaacgtgatt tatggcctga tggaaaattt gtaactggtc
     2281 taattgttgc aagatctgag tatctaaaac agaatcctga tgtcattgaa aaatttctta
     2341 aagctcatgt agaagagact caatggataa ataataataa agaagaagca ataaaggctt
     2401 ttaatactga gctcaagaag ttaactggac agacaatacc agaagacacc ttgaaagaat
     2461 cattgacaag gctcgaacta acttatgacc ccatacaaca atctctatac aaatcggcta
     2521 atgatgcttt tgatatagga tttcttggaa aaacaaaacc tgatctttct aatatatttg
     2581 atctaaatat acagaacaaa atattagaag aaaaggcttt agttagcata aatagtacga
     2641 gtagtggtat atcctaaaaa taggtttgct gtcaatgtta catagcacaa atacaacaac
     2701 attaaaaaat cttgctggaa agatattttc tgtcatcttt ccagtttttt ccttgttatt
     2761 cctgtcattt ctttcgtagt aactatttac gaaactttga ccaatggtca ttcaagtgaa
     2821 aaaacctatt aactataact ttaaaaaata tggactactt caaatggcta atgtctataa
     2881 ttttaattga atttgaaaga actttaatta tcaaattttc aattctagtt ttagggtaac
     2941 atattgtaac aaaatttttc agtagtaaat gtacccgtgt tttatatgca gaaaagtaag
     3001 gagtagttgg tagcattcat ttattagaac ttattaaaac agagaaaata caattatata
     3061 ataaataatt ataattttaa gtttattgac aaccattgaa taagtattat caattttgtt
     3121 cttctggttt agttttattc aactctcaat ctcataaaaa aaataaatat ttatcaacaa
     3181 taggtaagta atctctacta tgaattaggt tattttccga ttttatccta ctatataata
     3241 ctactgctat cacattgtga acgagataac aatcctcaga aagtatagta atattttgaa
     3301 agataattta catatagata tattatcaac attatttata atttaaacta tagtaacaat
     3361 aaaactgtta atagcgctat aatgttaaaa taaagaggaa tcgatatttt catgtttaag
     3421 gagtttgaaa ctgtataatt acaatattct ttatttgata atcataatag ttactttatc
     3481 ttctatgcta atatacaata ctaattttaa tttaaaaaga gatctttctg atcaatatga
     3541 gactttatta gatttcaata atcataacaa aaaagcagac gcagtagaat tttcagatac
     3601 tgcagaaaat tcattcgagt atatctttga catatctgaa tatttaggat ttaagggttc
     3661 taaaaatata accggttctg ataacggtga tggaaa
//
LOCUS       DATIAS010000738         8407 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1494010, whole genome shotgun sequence.
ACCESSION   DATIAS010000738 DATIAS010000000
VERSION     DATIAS010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 8407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8407
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494010"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1243
                     /locus_tag="VLA74_14860"
     CDS             <1..1243
                     /locus_tag="VLA74_14860"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSF52037.1"
                     /translation="IVVVAPDDGGIDLPGGKPGKFDDSTYNIINNDNIFTVSYQSSTV
                     YNSSNNETAVSEGFDNSSNNAIIKTIKVGSQPSDIDINTNSNKIYVANAGNNTVSVID
                     GFTDNVINNNITVGNGPSDIKINEKTNKIYVANAGSNTVSVIDGFTDNVINNNITVGN
                     GPSDVAINENTNMIYVTNNSSNSVSVIDGFTDNIVAGLKFSITPAYAGQIICGEKEYP
                     LNVYIYVIPGTECKAETKKAFEFRGWLENLNKDSSIPIHPSENSNSFYNSFLKFFNVY
                     HEDPTFKVTKYGTFTANFKELPPPFPPEYWLALFGVIVSSIVGSWFIPGIIKWGKTKL
                     QMKEFRRLRSNIEPSNKVTQQSTENNIDIESITDAYAEGKINELQYKLLKEKIEINTA
                     ENNKIKNKFTSQNQIDKKTPV"
     gene            2189..3355
                     /locus_tag="VLA74_14865"
     CDS             2189..3355
                     /locus_tag="VLA74_14865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52038.1"
                     /translation="MINNIINNKKIILLMEVISILLIVPIISSFILAQPTDIQNNSIH
                     LSNQNEDIFSPFDDRVINKIKSSQFSHFAESIPSPLIFKEKKEQLEKLVESKEYKLML
                     KQCEFTNINKGRENVINIIKSQIQKQEGIFNDRVQDQNYRKVWYLDTKNFELKNNNFT
                     LQIREQYKNNGDLKEYDIVLKNRDDDIYNALKYDLSNPTKNPEFNYKKEPEFKFEEDI
                     ITPFHSKFSASTKFEFKPQQKPKLETWQDILSVFPNLLNLGISPTKSLLPVNGFMAKE
                     FSYELGNLKFGNGNEFKTEISLWYLPNETDKNFSLSSIANKVPLVVEFDIDVKADETS
                     ADNGILLYEFTPSFLQKIKRFYMELQNESIIDLNANTTKTDYVYKHLNKDRICT"
     gene            complement(3477..3767)
                     /locus_tag="VLA74_14870"
     CDS             complement(3477..3767)
                     /locus_tag="VLA74_14870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52039.1"
                     /translation="MTKGQNLLEYFKKRFDEAHSIKGLEDNDYRQYFSIFSNTLSRIP
                     DEEFDKIVNALEVFRRLRPRKYKYKEYITIKVDVLFLTNLNNMQVRIGYSQL"
     gene            4312..5277
                     /locus_tag="VLA74_14875"
     CDS             4312..5277
                     /locus_tag="VLA74_14875"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSF52040.1"
                     /translation="MSHKIFSLVFAAVILSFIVYVAIIQGHSAYAVVVFPDFNFGAAG
                     DWGCTSDANSTAKNMIEKGIELNLGLGDYSYDDPRGAKCWLDTIKPIFNKTKISMGNN
                     DNIIEYMNVFNLTKQYYSFDVQNVHFLVISTELQNDFTEPQNDSDNDQLKFVRDDLNK
                     TSSNPDIDWIVVYFHRQAYTSLIKDVLNPGGLDRADNTTRNKYHPLFDKYNVDIVLQA
                     HNHNYERSYPLNYNKVNPDNPIKVSNETNNYYSDLSGPIFVTVGTGGNGHYKFVGKKD
                     YIINQTDSSYGFLNVDVINNGTKLNAKFLSNNGIVEDQFTIVKSP"
     gene            5798..6178
                     /locus_tag="VLA74_14880"
     CDS             5798..6178
                     /locus_tag="VLA74_14880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52041.1"
                     /translation="MRNMVESTKLEASYSGNHSYGFQDDILRIDPYSLFLHAMKSPVT
                     KKKYCRRLEMFFNFIKIPGENLEEQCLTFVNNGKDNANWVFTNILKFVLFYKQRIDKK
                     EISEATLINQTFTNQFSRTLVLVV"
     gene            6630..7607
                     /locus_tag="VLA74_14885"
     CDS             6630..7607
                     /locus_tag="VLA74_14885"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSF52042.1"
                     /translation="MIIPSTAIIMLTITTNDPVYGQQDKTNFNETDSLTIQSIPAKKV
                     QVGDIEIAYKMLGKGDPILLFNGASDGMDAWDPSFPMTLSSNHTVIAFDSRGLGNTTM
                     GSKPYSMQQLADDAAGLLDALKIPKADVMGYSLGSDIAQKFTIMYPDKVNTLVLVAST
                     CGGKDHTPKPPEYIKLELEIANKSLNNIPVTQEEMKELVAASLGSGWIKLHPESLENI
                     PTDLQQAKPGLSFDAMNNQNNIGLKWLATNWSGACDELAKLDKPTLVITGTDDNKIVP
                     YVNSLKIAEKIPAAWLVQIKNAGHAVMDQYPEEMGKIMNTFLSTTAQSH"
     gene            complement(8207..>8407)
                     /locus_tag="VLA74_14890"
     CDS             complement(8207..>8407)
                     /locus_tag="VLA74_14890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52043.1"
                     /translation="KHDYSVYKDEHPITPPQVKNYFDLGYKGIENDFPDLKAVLPVKK
                     KRNIELTKSEKRYNKRHSRQKE"
BASE COUNT         3126 a         1196 c         1186 g         2899 t
ORIGIN      
        1 tatagttgta gtagctccag atgatggtgg catagatctt ccaggaggaa agccaggaaa
       61 gtttgatgat tctacatata acataataaa taacgataat attttcactg taagttatca
      121 atcctctact gtatataatt cttcaaataa tgaaacagct gtttcagaag gatttgataa
      181 ttcttcaaat aatgcgatca ttaaaactat caaagtaggt tctcaacctt ctgatataga
      241 tattaatact aattcaaata aaatctatgt tgctaatgcc ggtaataata cagtatctgt
      301 aatagatggg tttacagaca acgtaataaa taacaatatc acagtcggta atggaccttc
      361 tgatataaaa attaatgaaa aaacaaataa aatctatgtt gctaatgccg gttctaatac
      421 tgtatctgta atagatgggt ttacagacaa cgtaataaat aacaatatca cagtcggtaa
      481 tggaccttca gacgtagcca ttaatgagaa tacaaatatg atttatgtaa ccaataattc
      541 atcaaattca gtatctgtaa tagatggatt tacagataac atagtagcag gcttaaaatt
      601 tagtattact ccagcttatg ctggacaaat catatgtggt gaaaaagagt atccactaaa
      661 tgtctacatt tatgtcatac caggaacaga atgcaaagct gaaactaaaa aggcatttga
      721 atttagagga tggcttgaaa atctaaacaa agattcatcc atacccatac atccatcaga
      781 aaattcaaat tcattttata attcgttctt aaaatttttt aatgtttatc atgaagatcc
      841 aacatttaag gttaccaaat atggcacctt tacggctaat tttaaagaac ttcctccgcc
      901 ttttcctcca gaatattggc ttgcattatt tggagtaatt gttagttcga tagttggaag
      961 ttggtttata cctggaataa ttaaatgggg taaaacaaaa ttacaaatga aagaattccg
     1021 tcgccttaga agcaatattg aaccatctaa taaagtgact caacaatcta cagagaacaa
     1081 tatagatatt gaaagtataa ctgatgcata tgcagaagga aagatcaatg aattacagta
     1141 taaattgtta aaagagaaaa ttgaaattaa tacagcagag aataataaaa taaaaaataa
     1201 atttacatct caaaatcaga ttgataagaa aactccagta taactttaaa agaaaattta
     1261 ttatattatg ttgctaacaa taatataacg aaattcgaag cccttatcct tttataaaaa
     1321 agaaaatttt accgtttaat tacttgtaat ttaataatta agatacttgt attatcatcc
     1381 tgctatatct tttttgagca ataaatttgg ttggatatat tttatcaata gttcactttc
     1441 taaactattt ttcttgctat actctttttt ataatcattt ctatatcttg ctgtaataat
     1501 ttttgtttta tgtgaaaagt ttcttttgga taaaaactaa ttttataaga atatgagtga
     1561 taaggtgaga tatatattga aacatatgtc atataccact gaatttgtta actctatttt
     1621 tttaataatt tataatatta tgtcaacatc aatttttatc tttttaaatt agaatataag
     1681 acccaattaa gaattttaat aatttaaaaa ctcattatta tttcaatata taaaaattta
     1741 atttctaata ataaaagcta aatactacgt agtagaatca tactacatgg aaggttccac
     1801 tcccgactgt caattaaata tgtagatgag cccgattgtt aagcccgaaa aatctactgt
     1861 gtatgctata aattagttga aatatattct aacaatagca atatattaaa attatttgta
     1921 aaattttaga agccgaaaaa ttttactatt ttaatacgat tcttagattt agtagaacta
     1981 tttctatttg accatcatat atcaatatat ttattaataa tgaaactttg gtcattttta
     2041 gttttcatat acattgttta atagtaaata gttgtaaatc aaagtgttga aataaaatca
     2101 ttcaaatttt attttacttc acttgtactc ttaatttttt taatgttcta ataaaaaatg
     2161 ataaatataa ctatccgtta ttttttttat gataaataat atcataaata acaaaaagat
     2221 aattcttctg atggaagtta tatctatttt attgatagtt cctataataa gttcttttat
     2281 attggctcaa ccgactgata tacaaaataa tagtatacat ttatcaaatc aaaatgagga
     2341 tatattttct ccttttgatg acagagttat taataaaata aaaagttctc aatttagtca
     2401 ttttgctgag tcaattccat ctcctctaat atttaaagaa aagaaagaac aattagaaaa
     2461 attagtagaa agtaaagaat ataaactcat gcttaaacaa tgtgaattta caaacataaa
     2521 caaaggcagg gaaaatgtca taaacattat caaatctcaa attcaaaaac aggaaggaat
     2581 atttaatgat agagttcaag atcaaaatta taggaaagta tggtatttag atactaaaaa
     2641 ctttgagctt aaaaataaca atttcacact tcaaataaga gaacaatata aaaataatgg
     2701 cgatttaaaa gaatatgata tcgtactaaa gaatagagat gatgatatat ataatgcatt
     2761 aaaatatgat ctttcaaatc ctacaaaaaa cccagaattc aattataaaa aagaacctga
     2821 atttaaattt gaagaagata taataacacc attccatagt aaattttcag cttcgacaaa
     2881 atttgaattc aaaccacaac aaaagccaaa acttgagaca tggcaagata ttctatctgt
     2941 ctttcctaac ctactaaatt tgggtatttc acctactaaa agtctcttgc cagtaaatgg
     3001 atttatggcc aaggaatttt cctatgaatt aggtaatttg aagtttggaa acggaaatga
     3061 atttaaaact gaaattagct tgtggtattt gccaaatgaa acagataaaa atttttcatt
     3121 atcatcaatt gcaaataaag ttcctttagt tgtagaattt gatattgatg tcaaggcaga
     3181 tgaaacatca gcagataacg gaattttact gtatgaattt acaccgtcat ttttgcaaaa
     3241 aataaagaga ttctatatgg aattacaaaa tgaaagtatt atagatctca atgctaatac
     3301 aacaaagaca gattatgtat ataaacattt aaacaaagat agaatatgta cataaatatt
     3361 tagaactaaa taaccttttt tgctttcgtc aatctaatta caatgtatta catattaata
     3421 ctaattaata ctgaataaca attaattcta aaggctctgt taaggtaacg ataaatctat
     3481 agctgtgaat atcctattct aacttgcatg ttattaagat ttgtcagaaa tagaacatcc
     3541 acctttattg ttatgtattc tttgtatttg tactttcttg gtctcagtct tcgaaatact
     3601 tctaaagcat taacaatttt atcaaattct tcatcaggaa ttctacttag ggtattacta
     3661 aatattgaaa aatattgtct ataatcatta tcctctagac cttttataga atgtgcttca
     3721 tcaaatcgtt ttttaaaata ttctaataga ttttgtcctt tagtcaatgt tatacaaata
     3781 agaaatatgg atataaattt acttatatga atgaatgata attgtctaag aaatattttt
     3841 tttatatttc tttacattta ttagatcaat taaagaaaat caaggatcaa tattctatta
     3901 taaactataa agaaataccg tgattgtttt ttaataatat ttttttgtaa atcttattaa
     3961 gttataaaat tgtaaaataa ttttacaaat cgaaagactg atttcttaac catggatatt
     4021 ttttattatt tatcgatgga taatttccta aataataaaa tctaaatacg acacctaaag
     4081 acagtccttt taaatttcaa ttgcaccaag tcataactaa gagcacctat gaagcatata
     4141 tccgattata aagaagaacg tcttgttgtc ctattacgtt caaacatcat aatatattta
     4201 ttttgatctg aatatgcttt agcaattact tttgcttaac atggctgtat ttttaacaag
     4261 aatattaata tactaatata cttgtataca agtcaaaaaa tgattgtaaa gatgtctcat
     4321 aaaatctttt cattagtatt tgctgcggta attttatcat ttattgttta tgttgccata
     4381 attcaaggac attcagcata tgctgttgtt gtttttcctg attttaattt tggcgctgct
     4441 ggagactggg ggtgcacttc agatgcaaat tcaacagcaa agaacatgat agagaaggga
     4501 attgagttga atcttggact aggtgactat tcatatgatg accctagagg tgcaaaatgt
     4561 tggttagaca caataaagcc aatctttaat aaaactaaaa tttctatggg taacaatgat
     4621 aatataatag aatatatgaa tgtctttaat cttacaaagc aatattactc ctttgacgtt
     4681 caaaatgttc atttcttggt tatctctaca gagctacaga atgattttac agagccacag
     4741 aatgattctg acaatgacca acttaaattt gtaagagatg atcttaataa gacctcatct
     4801 aatccggata tagattggat agtagtctat tttcatagac aggcatacac ttccctaatt
     4861 aaagatgtat taaatccagg tggattagat agagcagata acacaactag aaacaaatat
     4921 catccattat ttgataaata taatgttgac attgtgttgc aggcacataa tcataattat
     4981 gaacgatcgt atcctttaaa ttataataaa gtaaatccag ataatccaat aaaggtcagc
     5041 aatgagacga ataattatta tagtgattta tcaggtccaa tatttgtcac agtaggtaca
     5101 ggtggtaatg ggcattataa attcgttgga aaaaaggatt acataatcaa tcaaacagat
     5161 tcatcatatg gattcctaaa tgtagatgta attaataatg gaacaaaatt aaatgcaaaa
     5221 ttccttagca acaatggaat agtagaagat caattcacta ttgtaaaatc accataatag
     5281 ttttacgcaa atatttatat agcattttac aaaatgactc taactactac tattatattc
     5341 ttaatcttct catccaacgt gccatctctt tatttttcgc tttttagtct cattgaataa
     5401 catcattccg ggtatgcaaa tatattattt aataatgagt attcagccca gtcattttct
     5461 aaagtttatt tatttttggt tatgcaatag tgatgtagta atgaaaaata attttgtcaa
     5521 aaaaaatttc tataaataat taacaaattc tattcaactt caaatatata cataaagtat
     5581 ttcaaatatt gactgaacct ttgtattagt aaagtttaaa atccctctga attcaaaaag
     5641 aaagcagaaa tttatctcat tttttacaat cagttaaaac aagttcaaac aataaaagct
     5701 aaatactatg tagtagaacc ctactacatg gagggcacta ctccgacggg gcccgcaacg
     5761 atatcggtgc taatatagga gtccaacata tataaaagtg agaaatatgg tggaatcaac
     5821 aaaattggag gcatcgtact ctggaaatca tagctatggt ttccaggatg atattttaag
     5881 gattgaccct tatagcttat ttttacatgc tatgaagtct cctgttacaa agaaaaaata
     5941 ttgtagacgt cttgaaatgt tttttaactt tattaaaata cctggagaaa atcttgaaga
     6001 gcaatgttta acttttgtca ataatggaaa agataatgct aattgggtat ttacaaatat
     6061 tttaaaattt gtactatttt ataaacaaag gatagacaaa aaagaaattt ctgaagctac
     6121 gttaatcaac caaacattca ccaatcaatt tagtcgcaca ttagttctag tagtatagaa
     6181 caagaaatca cttccctaca atttttttat taaatcagaa attatcctga tagagtcaca
     6241 aatatctata acagctactt tgttttctta tcaattctaa taagataata tatcactaaa
     6301 aaatggtcta gtaaaagatg ccattgcaat ctgagaaaat actagtgaag ttaaacaagt
     6361 aaaaacttaa agatcataat aaaatacaac caatagtaat attttttaaa atgttgtata
     6421 ctattcgtta attctagtga taccggtttc agttaaattg ttgaggttgt atcaatatag
     6481 ttggtatcat cttttgaata ttatgtggat aataaaaaat aaggttaata gtaagcagat
     6541 gttatctcaa tccagataac aaaatgtatt acccacaaaa aattaaagga aataaaactt
     6601 ctgctttcat cattatcttc atgtttataa tgattatccc tagtactgct attattatgt
     6661 tgacgattac tactaacgat cctgtttatg gtcagcaaga taagacaaat ttcaatgaaa
     6721 cagattcatt aaccatacaa agtattccag caaaaaaagt tcaggtaggg gatattgaaa
     6781 ttgcatacaa gatgttagga aaaggcgacc ctattttact tttcaatggc gcttctgatg
     6841 gtatggatgc ttgggaccca tcctttccaa tgactctttc ttcaaaccac acagtaattg
     6901 cgtttgatag tcgcggacta ggaaatacaa caatgggttc caaaccatat tctatgcagc
     6961 aactagcaga cgatgcagct ggtctgcttg atgctttgaa aataccaaaa gcagatgtta
     7021 tgggatattc tcttggatca gatatagccc aaaagtttac aatcatgtat ccagataagg
     7081 ttaacactct tgtacttgtt gcttcaacat gtggcggaaa agatcataca cctaaaccac
     7141 ctgagtatat aaaattggaa ctcgaaattg caaacaaatc tctaaataat attcctgtta
     7201 ctcaggaaga gatgaaagag cttgtggctg cttcattagg atctggatgg attaaactgc
     7261 atcctgaatc ccttgagaac attccaacag atttacaaca agcgaagcct ggactttcct
     7321 ttgatgcaat gaataatcag aataacatag gactgaaatg gttggcaacc aactggagtg
     7381 gtgcctgtga tgagcttgcg aaattagaca aacctacttt ggtgataact ggaactgatg
     7441 ataataagat agtgccgtat gttaattctt taaagattgc agaaaagatt ccagcagcct
     7501 ggcttgtaca gatcaaaaat gcgggtcatg cagtaatgga tcaatatcca gaagagatgg
     7561 gtaaaataat gaatacattt ctttcgacta cagcccaatc tcactaatgc aattagtatg
     7621 atctattagt agtaggataa gttattagtt ctaatcttgg agtcaataag taaattatat
     7681 ttaataataa aagaaccccc aaatgtgcct atagggttcg aatttcactc taagtattta
     7741 actcatgaaa tcattttttt atctttacca ttataaaatt tctgcgttat tgtaaaaaaa
     7801 agtcaaaata tgtagaattt gtacttatat tgcatttgtc tatgttagga cttttatata
     7861 atctaaatga atattgaaca ctgaaaccat gaccattcaa ctcccgacgg gcccgtactt
     7921 ttcttgggtt catctatttt tgattttgta tattacagat ttactattag ttattatcaa
     7981 tactgtctat tttgatatat tagatctctt gcgtaattag aaaacatacc gaatgttttc
     8041 attgtttatt ggtttacaat tatcttcttc tgctatggat tattctatag ttaaccagac
     8101 cagaaacaat atcagacatt acatcatatc tctttagtct gtttctctgt atctgcttcc
     8161 cattatacca aatttcttta tcctgcagat agggtgtgtt ctacaattac tctttttgtc
     8221 tactatgtct tttgttgtat ctcttttctg atttggtgag ttcaatatta cgtttctttt
     8281 ttactggtaa tactgcttta agatcaggaa aatcattttc tattccttta tacccaagat
     8341 caaaataatt tttaacctgt ggtggtgtta ttggatgttc gtctttgtag acagaatagt
     8401 catgctt
//
LOCUS       DATIAS010000739         3575 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1494133, whole genome shotgun sequence.
ACCESSION   DATIAS010000739 DATIAS010000000
VERSION     DATIAS010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494133"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1081
                     /locus_tag="VLA74_14895"
     CDS             <1..1081
                     /locus_tag="VLA74_14895"
                     /inference="COORDINATES: protein motif:HMM:NF018479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HSF52044.1"
                     /translation="SNFFGFLFLFITVWWSWVGTAFFATRFYSDDIKHRLLLLLQMGG
                     AGAMAVNISGAFSNTFSGFALSYAFMRLILVIEYVRVFRATTTKQITSKSIIPNPLIK
                     RYIVGFSIAAIIWLISTFVPVAEERFVLWIIGLIVDFATPITAGKLHSQFAPDISHLP
                     ERMGLFTLIVLGEAIAGIITGMTDQVWNIYSVTVASLGLCISFSLWWLYFDSSGRLPI
                     HILKEKGSIAIYYIWLYTHFPLVVAITAVGVGIRRLVSSDQNSALANSDLWLICGSVA
                     ISLISQAILHIISVESDSKIGFNHRKKFAIYRIVSAIAIISIPILFSNYNIIPIIIAS
                     ILTAICGIQIVLDLKLHTEHRSFKL"
     gene            complement(1159..1719)
                     /locus_tag="VLA74_14900"
                     /pseudo
     CDS             complement(1159..1719)
                     /locus_tag="VLA74_14900"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
     gene            1870..2340
                     /locus_tag="VLA74_14905"
     CDS             1870..2340
                     /locus_tag="VLA74_14905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSF52045.1"
                     /translation="MTIDQQNSNFNLDYDTNNNNSNSKSKFIIEERRRLVAKLWAQSK
                     TETEIARELHCNVSTICRDIKYLKKLSQQFVFDLAKDLGFYYKGCIDTMDQIQQKCWN
                     IYNNDNQVSQKDRLLALKIIKETCESKFSLIEKGPSVMALNSLQERVEKIESNN"
     gene            2324..3556
                     /locus_tag="VLA74_14910"
     CDS             2324..3556
                     /locus_tag="VLA74_14910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52046.1"
                     /translation="MNRITNLDKTIQELTNRLDEVHPYSASSSISNYQNSNDGVNYWK
                     GKKIIPVKDWNDLYKKKSTYIDNYKITLTSRIPLQYFPDDYNDSISASGIVDEKLKEE
                     IQKWNTDYYELLEYKKNPILGRMKCSKCLLSGSNDDPIFIGIEKVFARIVTNQCNNAI
                     NTHSNGFISYHCNVMNIFSCPFESKEEYRNNNREEIKLSYTKEDLFALHQISFAIEQA
                     ITTFFEITKNNEIIYEVDFVNDSVQEIHTNYNGEPESWGWNDNVKEQLSKVKSISNIV
                     IRDENDIYSILTNKEKLEYLFQEYEKKYQLDREVCCDENTPCGTNEDNNSNNIELVSS
                     TLTATTTESLAIGKKQQQLQQQQVQDEQEGYSLKGENRHSKNTGEGELDNNEKLISNL
                     KAQIKDEIEEQEEWLHLN"
BASE COUNT         1337 a          502 c          554 g         1182 t
ORIGIN      
        1 atctaatttt tttggattct tatttctctt tataactgtt tggtggtcat gggtaggtac
       61 agcattcttt gctactagat tttattctga tgatataaag cataggcttt tattgttatt
      121 acaaatgggt ggagcaggtg ctatggctgt aaatatttca ggtgcattta gtaatacatt
      181 ttctggtttt gcattatctt acgcatttat gcgtttaata cttgtaatag aatatgttcg
      241 tgtatttaga gctactacta ctaaacagat aacatcgaaa tcaataatac ctaatccttt
      301 gataaaaaga tatatagtag gtttctctat tgcagcaatc atctggttaa tttctacatt
      361 tgtgcctgta gctgaagaac gttttgtatt atggattatt ggattaatag ttgattttgc
      421 tactccaatt acagctggga aattacattc acaatttgct cctgatatat ctcatttacc
      481 agaacgtatg ggtttgttta cacttatagt acttggagaa gctattgctg gtataattac
      541 tggaatgact gatcaagtat ggaatatcta ctcagtaact gtggcatctt taggattatg
      601 tatatctttt agtctgtggt ggttatattt tgacagtagt ggaagattac ccatacatat
      661 tctaaaggaa aaaggcagta ttgcaatata ctatatttgg ctatatacac actttccatt
      721 agttgttgca ataactgcag taggagttgg tataagacgt ttagtatcaa gtgaccaaaa
      781 ttctgcttta gctaattcag atttatggct tatttgtggt tcagtagcta tatcattaat
      841 ttcccaagct atacttcata taatttcggt agaaagtgat tctaagattg gatttaatca
      901 tagaaaaaag tttgcaattt atagaatagt ttcagcaata gctatcatta gtatccctat
      961 tttgttcagt aattataata tcataccaat tatcatagct tctatactca ctgcaatatg
     1021 tggcattcaa attgttcttg atctaaaact tcatactgag catagatcct ttaaattata
     1081 gagtttaaga tctaaatata ataaagtaat aaagaaaatg ttaagtgtac taaattatat
     1141 ctactaatct tttattatct attttttata tttttctact atttttcgta ttctctcacg
     1201 ttcctgttga ttaggtttta tctgtgattg taaagaccaa tactttccat catgatatat
     1261 caatgacttt ttttctggat tatgtatagc atctaatact tcaccaataa acattatatg
     1321 atctccaaat gtaatttctt gaaatagctt gcactcaacg ttgagtgagg ctccttttat
     1381 cagtaatgtc ttgatttttt tagcatcata aaactaaaat cctaattccc ttagtgcatc
     1441 aaccttatta tacttgctac cactatatcc acctgctaca ctagataaaa cagattgatc
     1501 acttgcacat aaattaacac caaattcttt tgagcttcta atattctcaa ctgtagcctt
     1561 tgtaggacct aaagaaacag ctatcaaacc aggatcatat gaaagatgat gtgtccattc
     1621 acaagccatg atgttgtgtc cattatgtcc atttgatgtt attaatccta tagtcgttgc
     1681 aaatttgtta gatctaggat cattccatgg taattccata taagagagtt aaattgaaag
     1741 gatgataaaa aatttcttat tattaacaaa atttacaatg ctagattatt tttaaatagt
     1801 atatattcaa agcatttcca atttaaagaa aaaatataaa agattaaact gaatatataa
     1861 atgcaataat tgaccataga tcagcaaaat tctaatttta atttagatta tgatactaat
     1921 aacaacaata gtaacagcaa atcaaaattc attattgaag agagaagacg cttggtagcc
     1981 aagttatggg cacaatcaaa aacagaaaca gaaatagcaa gagaactcca ttgcaatgtt
     2041 tctactattt gtagagatat caagtatcta aagaagttat cacaacagtt tgtatttgat
     2101 ttagccaaag atttaggttt ttattataaa ggatgtatag atacaatgga tcagatacaa
     2161 cagaaatgtt ggaatattta taataatgac aatcaggtat ctcaaaaaga tcggctgcta
     2221 gcgctaaaaa taattaaaga aacctgcgaa tccaaattct cattgataga gaaaggacct
     2281 tcagttatgg ctctaaactc attgcaggaa agggttgaaa aaattgaatc gaataactaa
     2341 tttagataaa acaattcagg aattaacaaa tagattagat gaagttcatc catattctgc
     2401 ttcttcatct attagtaatt atcaaaatag caatgatgga gttaattatt ggaaaggaaa
     2461 gaaaataatt cccgtaaaag attggaatga tctatacaaa aagaagtcaa catatataga
     2521 taattacaaa attactttaa catccagaat accattacaa tacttcccag atgattacaa
     2581 tgattcaata tctgcatcag gaatagtaga tgagaagtta aaggaagaaa ttcagaaatg
     2641 gaatactgat tattatgagt tactggaata caaaaagaat cccatactgg gaagaatgaa
     2701 atgttcaaag tgtttgttaa gtggttcaaa tgacgatccc atttttatag gtattgaaaa
     2761 agtatttgca agaattgtaa ccaaccaatg caataatgca ataaatactc actctaatgg
     2821 cttcatttcc tatcattgca atgtcatgaa tatattttca tgtccttttg agagtaaaga
     2881 agaatatcgt aataataata gagaagaaat aaaattgtct tacacaaaag aagacctatt
     2941 tgctttacat caaatatcat ttgcaattga acaagcaata actacatttt ttgaaataac
     3001 aaaaaataat gaaataatat atgaagtaga ttttgtaaat gatagtgttc aagagattca
     3061 taccaattac aatggtgaac cagaaagttg gggatggaat gataatgtaa aagagcaatt
     3121 atctaaagtt aaatcaattt caaatatagt aataagagat gaaaatgata tctattctat
     3181 tttaactaat aaagaaaaat tagaatattt atttcaagaa tatgaaaaga agtatcagtt
     3241 agatagagaa gtttgctgtg acgaaaatac cccttgtggg actaatgagg acaataattc
     3301 aaataatatc gaactagtat catcaacatt aacagccacc acaaccgaat cattagcaat
     3361 aggaaaaaaa caacaacaat tacaacaaca gcaagtacaa gatgaacaag aaggctattc
     3421 actcaagggg gaaaatcgtc acagcaaaaa cactggagaa ggagaattag ataataatga
     3481 aaaactaata tcaaatctaa aagcgcaaat aaaagatgaa atagaggaac aagaggaatg
     3541 gctgcactta aattaaacag atcatttatc ggtat
//
LOCUS       DATIAS010000740         3367 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1357728, whole genome shotgun sequence.
ACCESSION   DATIAS010000740 DATIAS010000000
VERSION     DATIAS010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1357728"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLA74_14915"
     CDS             <1..249
                     /locus_tag="VLA74_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52047.1"
                     /translation="FPYRVRRRRSCQQLFKLGIIINFVHLFLNIKWFILMIHSEAIKQ
                     SHSLIQNVSCRYFDKGYGFYQFLNYIQLEEFVILRNRF"
     gene            complement(273..527)
                     /locus_tag="VLA74_14920"
     CDS             complement(273..527)
                     /locus_tag="VLA74_14920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52048.1"
                     /translation="MSDCCDVSSFTDPLLAYEHIKENPNKYSLLIINDKMPNVNGLFM
                     GTKLLEINPKLNVIILSDYFATLKCNYKFNILKSVYRYLN"
     gene            complement(571..1686)
                     /locus_tag="VLA74_14925"
     CDS             complement(571..1686)
                     /locus_tag="VLA74_14925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52049.1"
                     /translation="MKNYKKKLENNLKIKLTSTKKTVTSMAIIMITMLLIITTIDNLF
                     TMKNASAQTHVGTPGNDRGNNRITGDPNSFNDMYGDAFPSLPPGTQGGNDQMIGGSNS
                     INQIYGDSLEMNGARGGNDQIIGGSESVNFLVGDASQMSGGSKGGDDTISSTGSGNVI
                     SGDAEGMLSSTGGDDRLTVYANGGEFNNLYGDSAGFMTSSTGGDDRINVNDGNDNSLF
                     GDSDTMFDSQGGDDRLTSNDGSGNTLYGDAFQMSGGSKGGDDRLTSGFGSDTMYGDAA
                     FVDSSSTGGDDTLNAAKGGPVKGGQDVLYGDAPNTAEGNGGADHFIVGGNKDATVKDY
                     NEADGDKISGVINNPKLNEQQQVEGQLNAMLLKGKSK"
     gene            2089..2559
                     /locus_tag="VLA74_14930"
     CDS             2089..2559
                     /locus_tag="VLA74_14930"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSF52050.1"
                     /translation="MVVEKQLYEAHLQQIFLMLLENKTNEQIASELKISIRSVQYYKR
                     RLEQRYGNFQMQKTNDTLIFEVQLYKNRMLTLYKALEQMVISNDRNVSGTEKAKCAEV
                     AADLILSVLKLEAEGIKTIQEIISNNNKRQRYLNNLQSKNDEYNIKEYDPNRKF"
     gene            2680..3144
                     /locus_tag="VLA74_14935"
     CDS             2680..3144
                     /locus_tag="VLA74_14935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52051.1"
                     /translation="MNENILSQINIPKFTTAHSLLEDKFSIEISTYKNNKKKNKIQLI
                     LGDKVCFVVKPYTGLVCDTIVRGLLPKKIGGLESPTVYLLVADNKLDFYKIVEKARKK
                     YKMNLDIVLDQILIKRIFTIHQLAHFLIFDLAKDIKKYKSKLVIITGDFISK"
BASE COUNT         1186 a          565 c          488 g         1128 t
ORIGIN      
        1 tttccatata gagtaagaag aagaaggtca tgtcaacaac tatttaaact tggaattata
       61 attaactttg ttcatttatt tttaaatata aaatggttta tactcatgat ccacagcgaa
      121 gcgattaaac aaagtcatag ccttattcaa aatgtttcat gtcgctattt tgataagggc
      181 tatggctttt atcaattttt aaattacata caattagagg agtttgtcat cttgagaaat
      241 agattttgat atacttttat tgacggcatc aattaattta gatatcgata cacgctttta
      301 agaatattaa atttataatt acatttcaag gtagcgaaat aatcactcaa tatgattaca
      361 tttagttttg gatttatctc taatagtttg gttcccataa ataacccatt tacgttgggc
      421 attttatcat tgataattaa taatgaatat ttattcgggt tttccttgat atgctcatat
      481 gccaaaagag ggtcagtgaa actagaaaca tcacaacagt cactcatctt taaagcctcg
      541 ctaattattg ttgttgtaat aaatattata ttactttgac tttcctttca aaagcatagc
      601 atttaattgt ccttctactt gttgctgttc atttaatttt ggattgttaa ttacacctga
      661 tattttgtcc ccatctgctt cattataatc ctttactgtt gcatccttat ttccacctac
      721 aataaagtgg tctgctccac cgttaccttc tgctgtattg ggtgcatcac catacaaaac
      781 atcttgtcct cctttcactg gtccaccttt agccgcatta agagtatcat ctcctccagt
      841 tgaactagaa tcaacaaaag cggcatcccc atacatagtg tctgatccaa agccactagt
      901 aagtctatcg tctccacctt tagagcctcc agacatttga aaagcatcac catacaaagt
      961 attaccacta ccatcatttg acgttaatct gtcatctccc ccttgagaat caaacattgt
     1021 atcagaatca ccaaatagag agttgtcatt gccatcattt acatttattc tatcatctcc
     1081 acctgtagaa cttgtcatga aaccagcact atcaccatag agattgttaa attcaccacc
     1141 attagcatat actgttagtc tatcatctcc acctgtagag gatagcatac cctcggcatc
     1201 accacttatc acattcccag aacctgttga acttattgta tcgtctccac ctttagaccc
     1261 gccagacatt tgagaagcat cgccaaccaa aaaattaaca ctctcacttc cacctattat
     1321 ttgatcatta ccacctctag caccattcat ttcaagagaa tcaccataaa tttgattaat
     1381 actattactt ccacctatca tctgatcatt accaccttga gttccaggag gaagagatgg
     1441 aaaagcatca ccatacatat cattaaaaga attaggatct cctgtaattc gattatttcc
     1501 tcgatcattt cctggagttc ctacgtgcgt ctgagcagat gcgtttttca ttgtaaatag
     1561 gttatctatt gttgttatta ttaacaacat cgtaatcata attattgcca tagaagtaac
     1621 agtttttttt gttgatgtta actttatttt tagattattt tctaattttt ttttataatt
     1681 tttcatgtta tattgttgtt atattcaaga tcttacatat aaggagcagg actacattgc
     1741 aaggaataat tgtagagaaa tgaccttttt ttatttttga gattataaca atatttatta
     1801 gtttatcaaa aaatgtattg cagtgcatgc ataacttatt taatcaatgt aactgggaaa
     1861 ctactatatc tgcaacaatg atgatgatgc tatcaaatta gtaaatatat ctggtaatgg
     1921 aaagggacgg ccaatagaga tgacaagaga acaatacgag tcatgggaaa gacatgaaaa
     1981 aagagatcga agatgatgat gatgattgag atgatgtttc gtaatattgc atgttttcac
     2041 attaaaaaat tgactataat gacaaattgg agttgaaaaa ataaaaaaat ggttgtagaa
     2101 aagcaattgt atgaagctca tttgcagcaa atattcctga tgttattgga aaataaaaca
     2161 aatgagcaaa tagcatcaga actaaaaata agtattagga gcgtacaata ttataaaagg
     2221 cgcctcgagc agcgctacgg aaattttcag atgcagaaga caaatgatac tctaattttt
     2281 gaagttcaac tttacaaaaa tagaatgcta actttataca aggcattaga acagatggtc
     2341 atatcaaacg atagaaatgt atctggcact gaaaaagcca aatgtgctga agttgctgca
     2401 gatttaatct taagtgtctt aaaacttgaa gcggaaggaa tcaaaacgat tcaagaaatc
     2461 atatcaaata ataataaaag acaaagatat ttgaataatc ttcaatctaa aaatgacgaa
     2521 tataatatta aagaatatga tcccaaccga aaattttaat taagtaaagt gattaacaac
     2581 aaaaaatact ctagttaaga aggaattagg actctctccc tctctccctc tcttcaactg
     2641 tctctatcga atttataata ctattttcta ctattatgat tgaacgagaa catattaagt
     2701 caaatcaata ttccaaagtt tacaacagcc catagtcttc tcgaagacaa gttttcaatt
     2761 gaaatatcta catataaaaa taacaaaaag aaaaataaaa ttcagttaat cttaggagat
     2821 aaagtttgtt ttgttgttaa gccttatact ggtttagtgt gtgatactat tgtaagaggt
     2881 cttttaccta aaaaaattgg tggtttagag tctcctactg tatatcttct agttgcagat
     2941 aataagttag acttttataa aatagtggaa aaagcccgta aaaagtacaa aatgaattta
     3001 gatattgtat tagatcaaat attaataaaa agaattttta caattcatca gttagcacat
     3061 ttcttgatat ttgatcttgc aaaagatata aaaaaataca aatctaaatt ggttattata
     3121 actggtgatt tcatttctaa atgattccta cattgaaaaa gaagaaaaag attggctata
     3181 tcttcaaatg attaatatct tcttataaac cttcagatat ttggaccagt aatgaccata
     3241 tactatttct gaaatattgt cctgaaaaac gtgataaaaa atgttatcat gctatggctt
     3301 tggatacttc agcaagacca catgagctac tatctttgaa aatcaaagat atcaagttta
     3361 gagtttc
//
LOCUS       DATIAS010000741         3336 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1087321, whole genome shotgun sequence.
ACCESSION   DATIAS010000741 DATIAS010000000
VERSION     DATIAS010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1087321"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..1219)
                     /locus_tag="VLA74_14940"
     CDS             complement(71..1219)
                     /locus_tag="VLA74_14940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52052.1"
                     /translation="MNYKNIKFLTYSDLEISLFILIVSTIGSFIQIAGGSWDVTSHLL
                     NQPESFFTPSHTILYSGIGLIVFSAGISSFLLRKKEIKQYASISLSFKLLIIGSFLSL
                     IAAPFDYLWHQTFGFDGLLSPTHITLTTGMLINSVAVFIGLYGVIKNNNISRWKNLGK
                     LFLIPSLSSLWFTSIWYVFMFVLPFSESEFFNFNLNIYGATLIASIFLPLVNSIMFLC
                     SSKVFNNVFGYSFIIVYLLVFVNTFSTIIPTGNLLSPLIPWYLVTVLGASLLADILLN
                     ARFIRINTQIKNNKLIASSIVGAIFYFFNYPMIVWTYGTFLNSNLESLNDIVPTFLNT
                     IVSITFITIPVGAVMGLIGYFIFSKIENSLNILIREKNNNSKVMKSNH"
     gene            1675..2802
                     /locus_tag="VLA74_14945"
     CDS             1675..2802
                     /locus_tag="VLA74_14945"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSF52053.1"
                     /translation="MSKIIINSNSSNIVLMLIFLASGTFFGIANAQNLTDASTTSKNL
                     SIGELYEFVIKSVVQVTKTTPPADPLGPNKENQTSLGTGFIYNNSGYIITNNHVVENA
                     PVVDITFINGDRYTANITGTDPFSDLAVIKINENVTENFPNPLVIGNSSKLRVGDPVV
                     AIGHPFGLESSMTTGIVSQIGRLLSVDEKGFSIPNAIQTDALINPGNSGGPLLNMKGE
                     VIGVNTAGIFPGNIGLAVPSDTVLRIIPVLIEGKNYTHPWLGVTGTTLTADLAKREKV
                     DRSQKGVLIDNIVKDGPADLAGLNGSTVNQYGEKRGGDLITAIDGKQIIKMEDLISYL
                     ELNKSVNENATLSIYRDGETLDKQITLKSRPTAPITNQTQN"
     gene            2917..3204
                     /locus_tag="VLA74_14950"
     CDS             2917..3204
                     /locus_tag="VLA74_14950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52054.1"
                     /translation="MKKIRFFVFSSLSVFFILLIIDIRIGQNIISGYAIELFGGHTSG
                     YSKLTTSGEIIDPTNQIIENGVIDPDKYLREFNYGRISTLDNGTVLRELPS"
     gene            3173..3319
                     /locus_tag="VLA74_14955"
     CDS             3173..3319
                     /locus_tag="VLA74_14955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52055.1"
                     /translation="MERFLENYHHSIRYSVKENSPGIFYNVWTFNGTVPVPTIRATEG
                     DLMS"
BASE COUNT         1343 a          435 c          494 g         1064 t
ORIGIN      
        1 ttctttggat taaagtatgt ataaaaaaat tttttattat tgataaagca atctgattga
       61 tataatagat ctaatgattg gatttcataa ctttagaatt attgtttttt tctctaatca
      121 aaatatttaa agaattctct atctttgaga atataaaata tccaatcaat cccataacag
      181 cacccactgg tatagtaata aaagttatag atacaatagt atttagaaac gttggtacta
      241 tatcatttaa cgattctaga ttactgttta ggaaagttcc atatgtccat acaatcatag
      301 gataattaaa gaaatagaaa attgctccaa ctatagaaga agctatcaat ttattatttt
      361 ttatttgagt attaattcta atgaatcttg catttaataa tatatctgca agaagagatg
      421 ctcctaacac agtaacaaga taccaaggaa taagaggaga aagcaaatta ccagttggaa
      481 taatagttga aaaagtattt acaaatacca ataaatagac tattataaac gaatatccga
      541 aaacgttatt gaataccttt gaggagcata aaaacataat agaattaact aatggaagaa
      601 aaatacttgc tataagagtt gcaccatata tatttaaatt aaaattaaaa aattcagatt
      661 cagaaaatgg taaaacgaac ataaagacat accagattga tgtaaaccat aaagaagaaa
      721 gagaaggaat aaggaaaagt ttacccaaat ttttccaacg tgaaatatta ttatttttta
      781 ttacaccata tagccctatg aaaactgcaa cagaattaat cagcattcct gtagtcaaag
      841 ttatatgagt tggacttagt agaccatcaa atccaaaagt ttgatgccat aaataatcaa
      901 aaggcgctgc aattaaagat aaaaatgatc ctattatcaa taatttaaaa gaaagagaaa
      961 tagaagcata ttgtttgatt tccttttttc tcaatagaaa tgagctgatc ccagcagaaa
     1021 atactattaa tcctattcca ctatacagga tagtatgaga aggtgtgaaa aatgattctg
     1081 gctgatttaa tagatgagaa gttacatccc aacttccccc agcaatttgt ataaatgatc
     1141 ctatagtaga aacaattaaa ataaacaatg atatttctaa atctgaataa gttaaaaatt
     1201 taatattttt ataattcata tttataaaca attttagcct atatacaact aataaggata
     1261 actaataata aaagcaaaat ccagttaaat aaaaaagaag aagaataaga atcaaataat
     1321 aggaaagaac ataatttatt acttgtaatc acatgtgaaa ttataaaaca agtcatttcg
     1381 acaataaagg ataaactttt tttcatttct tctttattat attagaataa ctgaatattc
     1441 attatataat tatcaaattg aagctaataa ctattaaatt aaaaaattat ttaaatttaa
     1501 taaatataac agaaaaaaat ttgtagattt acatttttat ttatttatat actctttgta
     1561 taaatatagg agaataataa atgaatttga gatcatcgta taactctgta atcaaaatat
     1621 caatctttta ttttaaaaga atatatagaa ataataaaat tacttaatgt ttagatgtca
     1681 aaaattataa tcaatagtaa tagtagtaat attgttttaa tgctaatatt tctagccagt
     1741 ggtacatttt ttggaatagc taatgctcaa aatttgactg acgcatctac taccagcaaa
     1801 aatttatcca taggtgagct atatgaattt gtaataaaat cagttgttca agtaacaaaa
     1861 acaacacctc ctgctgatcc cttaggtcca aataaagaaa atcagacttc attaggtaca
     1921 ggatttattt ataacaattc aggatatatt attacaaata atcatgttgt tgaaaatgca
     1981 ccagttgtag atataacttt cattaatggt gatagatata cagcaaatat aactggaaca
     2041 gatcctttca gtgatttagc agttataaag ataaatgaaa atgtaacaga gaactttcct
     2101 aatcccttag taattggaaa ttcatctaag ctaagggttg gagatccagt agtagctata
     2161 ggtcatccat ttggattaga gagttcaatg acaacaggaa tcgttagtca gataggtaga
     2221 ctcttatctg tagacgaaaa aggattttca ataccaaatg ctattcaaac tgatgcatta
     2281 atcaatcccg gaaattctgg aggtccacta ttaaatatga aaggagaagt cataggagtt
     2341 aatactgcag gtatttttcc agggaatatt ggattagctg ttccttctga tacagtatta
     2401 cgaataattc cagtattgat agaagggaaa aattatactc atccatggct aggtgtaact
     2461 ggaactacct taacagcaga tcttgctaag agagaaaaag tagatagaag ccaaaaaggt
     2521 gtccttatag acaacatagt caaagatggt cctgcagatt tagcaggctt gaatggtagc
     2581 actgtcaatc aatatggcga aaagagagga ggagatctca ttacagcaat agatggcaaa
     2641 caaataatca agatggaaga tttgatatca tatttagaat tgaacaaatc ggtaaatgag
     2701 aatgcaacat tatcgatata tagagatgga gagactctag ataaacagat tactttaaag
     2761 agcagaccaa cagctcctat aacaaatcaa acacagaatt aatttttaaa aattttttta
     2821 ttatatcaaa cctaaagtat tggtatcttc tttatcctgc ttctcaaaag ttagtatagg
     2881 ctaacattta tttagtaata taactatatt tacattatga aaaaaattcg gttttttgta
     2941 ttttcatctt tatctgtttt ctttatatta ttgatcatag atattcgaat tggtcagaac
     3001 ataatatctg ggtatgctat agaactcttt ggaggacata cttcaggcta cagtaaatta
     3061 accacttcag gagaaattat tgatccaact aatcaaataa tagagaatgg ggtaatagat
     3121 ccggataaat atcttcgtga attcaattat ggaagaatat caacattaga taatggaacg
     3181 gttcttagag aattaccatc atagcatcag atactctgta aaggaaaatt ctccaggaat
     3241 attttataac gtatggacgt ttaatggaac agttcctgta ccaacaataa gagctactga
     3301 aggagattta atgagttaat ttcataaata atggtt
//
LOCUS       DATIAS010000742         2849 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_2041763, whole genome shotgun sequence.
ACCESSION   DATIAS010000742 DATIAS010000000
VERSION     DATIAS010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2041763"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VLA74_14960"
     CDS             <1..878
                     /locus_tag="VLA74_14960"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSF52056.1"
                     /translation="KIGVSTYKEAAQIVLDFSIKKIQRIIEPMIKQYQLETDQMFLIG
                     GGGGASALVPYMAKKLKYQFELAQNAEVISSIGVAAAMIYEEIEKTINQPKPEDVSLL
                     IDEIKKRALERGAAPESISIQTEYINERSLLRATASGNVELDIGKNNKRELNFAEVEN
                     IAIKVLGSNEVKQILNMKNYYGFTCEIIKKNFFVKVRKTPIVILDKLGRIRLMLENAE
                     IINGTRDLKTNIESLVYKFSNKNKDDLAPQIHILDDVKIIDFSSLSSPEHLIEAIKKE
                     FDKLTVETVTIIIKK"
     gene            1206..2099
                     /locus_tag="VLA74_14965"
     CDS             1206..2099
                     /locus_tag="VLA74_14965"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0002189 - ribose phosphate
                     diphosphokinase complex [Evidence IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HSF52057.1"
                     /translation="MLKDSVVIAGPASEQLAFNIAKRLNIKFIKPELRIFADGESKIK
                     LESVENNQCIIIQSLYPPIDRHIIQLLMMIQKCRRDKALKTIVVIPYMAYARQDKAFL
                     EGEVISISILAEIIECFGVSRVITVDIHSQSSLSYFGNIIKNISAIPILAEYALQNIF
                     LNNAIIISPDFGGLKRAQKFGEIIQREVTFLKKTRDRLTGMVSIEDVLDFKVKDKDVI
                     LVDDMISTGNSIIKACEVLRNNGAESIFVICSHALLLDKALDKIIRAGATEIISTNSI
                     PNSCSKVDLSKIISEVISENS"
     gene            2146..>2849
                     /locus_tag="VLA74_14970"
     CDS             2146..>2849
                     /locus_tag="VLA74_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HSF52058.1"
                     /translation="MTDMKLVFLGTSAAIPTLQRGLSSLAIVRGNEILIFDAGEGMQT
                     RFIESKIGMNKKMKIFITHMHGDHCVGLLGLLQTLSLMGRNKPIEIFGEPTIAEFLNQ
                     NIRIINFKLSYDVVIHKISGEGIVISEKDYKITSCFADHSKLAYSFCLEEFDRPGIFH
                     LDAVKRLGIPEGKIYSDLQHGKDITFKGEKISSKGITGPPRPGRKIGISGDTRPTLKL
                     TYFFKDSDVLIFEATF"
BASE COUNT         1100 a          379 c          523 g          847 t
ORIGIN      
        1 aaaaaatagg agtaagtacc tacaaggaag cggcacaaat agtattagat ttttctatta
       61 aaaaaattca acggataatt gaaccgatga ttaagcaata tcagttagaa acagaccaga
      121 tgttcctaat cgggggaggc ggcggagcct ctgcattggt tccgtatatg gcaaagaagc
      181 taaaatatca gttcgaatta gctcaaaatg cggaggtaat atcatctata ggagtggctg
      241 cagcaatgat atatgaggaa atagaaaaaa ccataaatca gccgaaaccc gaagacgttt
      301 cattattaat tgacgaaatt aaaaaaagag ccctcgaaag aggagcagca ccagaatcaa
      361 tttcaatcca aactgaatat atcaatgagc gttcattatt aagagcaaca gcatcaggaa
      421 acgttgagtt agatatcgga aaaaataaca aaagagagct gaattttgca gaagtagaga
      481 atattgcaat aaaagttcta ggaagtaacg aagtgaaaca aattctgaat atgaaaaatt
      541 attatggatt tacctgcgaa ataataaaga agaatttttt tgtcaaagta aggaagaccc
      601 cgattgtaat tttagataaa ctaggcagaa tacgattaat gctagaaaat gcagaaataa
      661 ttaatggaac gagagattta aaaaccaata tagaatcatt agtatataaa tttagtaaca
      721 aaaataaaga cgacttagcc ccacaaatcc atattttgga tgatgtaaag attatagatt
      781 tttcaagttt aagctctcct gaacatctaa tcgaagccat aaaaaaagag ttcgataaat
      841 taactgtcga aaccgtaact atcattataa aaaaatagaa gagtagaata gaacatcatc
      901 atatgagaga tttctttaat caacaaaaat catttttaaa atattccaat ttttaatttc
      961 tattactagg tattcgatta atcgataatt gttttgcaga aatggacaat tactagtaca
     1021 tctaccttaa ttagatatag tcttatttat ttaattataa tttcaaaaac tatttttaac
     1081 aaatttctac tcttctgttc aataaaaaaa ctgtagataa gaaaaaattg aataaaatag
     1141 tgattaacta gaatatagcg gacctcataa ggtttttatg attcgattag ttttattgtt
     1201 attatttgtt aaaggatagt gtggtaatcg cagggccagc atcagaacag ttagcattta
     1261 atattgcaaa aagattaaat ataaaattca taaaacctga gctcaggata tttgcagacg
     1321 gggaaagtaa aataaagcta gaatctgtag agaataacca atgcataatt attcaatctc
     1381 tttatccgcc tatcgacaga cacataatcc aattattaat gatgatccaa aagtgtagaa
     1441 gagataaagc attaaaaact attgtagtga ttccatacat ggcttacgca aggcaggata
     1501 aagcatttct cgagggtgaa gtaataagca tatcaatctt ggcagaaatt atagaatgtt
     1561 ttggagttag tagagtaata acggtcgata tccatagtca atcatcgtta tcttattttg
     1621 gaaatattat caaaaacatt tcggcaattc caatattagc ggaatacgct ctgcagaaca
     1681 tatttcttaa taatgccata attatttctc cggattttgg tggattaaaa cgagcacaaa
     1741 aattcgggga aataatacaa agagaagtaa cttttctaaa gaaaacacgt gacagactaa
     1801 caggaatggt ctcgattgag gatgtattgg attttaaagt aaaagataaa gacgtaattt
     1861 tggttgatga tatgattagc acaggtaata gcataataaa ggcttgtgaa gtgctaagaa
     1921 ataatggagc tgaaagcatt tttgtaattt gttctcatgc attactgctt gataaagcgt
     1981 tagacaaaat aatacgagct ggcgcaacag agataatctc tacaaattcc attcccaaca
     2041 gttgttccaa ggttgatcta tctaaaatta tatctgaagt aattagtgag aatagctgat
     2101 tggattattg taaagtatta gcagatataa ttggaaatga tataaatgac tgacatgaaa
     2161 cttgtttttt taggtacatc tgcagcgatc cctacattgc aacgtggact atcatcccta
     2221 gctatcgtga gaggaaatga gattttaatt ttcgatgccg gagaaggaat gcaaacaaga
     2281 tttattgaat caaagattgg gatgaataaa aaaatgaaga ttttcataac tcatatgcat
     2341 ggtgatcatt gtgtaggatt gttaggttta ttgcaaactc tttctttaat gggaagaaac
     2401 aagccaatag aaatttttgg agaaccaacg atcgcagaat ttttaaatca aaatataaga
     2461 ataattaatt tcaaattaag ttacgatgtt gttattcata aaatatctgg agagggaata
     2521 gtaatcagtg aaaaagatta taaaattacc agttgttttg cggatcattc gaagttagct
     2581 tattcttttt gtctcgaaga atttgatagg cctgggattt ttcatttaga tgcggtaaaa
     2641 cgtttgggga ttccagaggg aaagatttat agtgatttac aacacgggaa agatataacc
     2701 tttaaaggag agaaaatatc ttcaaaaggt attactgggc caccgcgacc tggaagaaaa
     2761 ataggaatat caggagatac gagacctaca ttaaaattga catatttctt caaggattca
     2821 gatgttttaa tatttgaagc gactttttt
//
LOCUS       DATIAS010000743         4148 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_813881, whole genome shotgun sequence.
ACCESSION   DATIAS010000743 DATIAS010000000
VERSION     DATIAS010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 4148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4148
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813881"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VLA74_14975"
     CDS             complement(<1..340)
                     /locus_tag="VLA74_14975"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HSF52059.1"
                     /translation="MKEYRNPRPTVDAIIQKSSFLLVIKRQNDPYKDTFALPGGFVDE
                     GETVEEALIREVFEETSLEIHPIEILGVYSNPKRDPRGHMITVVFITTIHGGEPNAGD
                     DAKELHWIPLD"
     gene            401..643
                     /locus_tag="VLA74_14980"
     CDS             401..643
                     /locus_tag="VLA74_14980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52060.1"
                     /translation="MQLLWREEWLKPLIDYEISSEECNFCKKKFLDFSFVTSCEFCDI
                     GIMHDYCANSHLVGIHYQELIKKTKRYKEKQLHDFQ"
     gene            complement(670..1578)
                     /locus_tag="VLA74_14985"
     CDS             complement(670..1578)
                     /locus_tag="VLA74_14985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSF52061.1"
                     /translation="MTIRAVDNVSFCLNAGESFGIAGESGCGKSTLASAILKNISYPG
                     KIESGSIFFNDEDISKLSDKDFSLKIRWKKISMIFQGAMNSLDPVYKIKSQINGIFLA
                     HREKENLEKILQIFKDFGLDKSILDKYPHELSGGMKQRIIIAMALLLDPEVIIADEPT
                     TALDVLIQAQIINLLKKLKKEKQISIILISHDIPLIAQLVDKIGIMYAGELVEINSTK
                     EIIFNPKHPYTKSLISQIPDIKAEFIVKKVNLNGDKLPILNDKINSNGCKYYSECEHA
                     MKKCMNNPPDYKIGKDGYVKCWLYEE"
     gene            1732..2241
                     /locus_tag="VLA74_14990"
     CDS             1732..2241
                     /locus_tag="VLA74_14990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52062.1"
                     /translation="MKTPICSFDAKTGILCSKCESKLKSGHLTEGDVEASIKLTKLAE
                     KNNTIDKFTLTGAYKLDEGLIMVLPSPDISIIRSDENIMNKIKEEFKENIWIIETGAT
                     EKRFIENLVYPVKIDSINLVWLPDGNKLTKIVISEKKNKNKIMEEVKIKAIASKIKNI
                     ELLIEYVKK"
     gene            2293..3585
                     /gene="aspS"
                     /locus_tag="VLA74_14995"
     CDS             2293..3585
                     /gene="aspS"
                     /locus_tag="VLA74_14995"
                     /EC_number="6.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004815 - aspartate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006422 - aspartyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA(Asn) ligase"
                     /protein_id="HSF52063.1"
                     /translation="MKKRNKRTHYSNQLNEKMIGNRVNVGGWIEDLRDIGKIIFLIIR
                     DITGPIQIVVNSDDFPEIKEIPRQSSVLISGIVQKSRAREIKVELKLDKIITISYAQH
                     PLPIDPTGRLESAIDKRLDSRALDLRNMYVSRLFIIRSIALEIIRKTLRKKGFIEVNT
                     PKIIGSASEGGANLFSFDYFKKKAYLAQSPQLYKEQLILALDRVFEIAPYFRAENSNT
                     VRHLTEFQSVDIEAAFVDYHEIMEIMEETIKNVISKIRKDDLINLDNNEKIKTALESK
                     FEILPYKECVVELRKIGEDIEYGDDLSDTSLRKLGQLHPGFYFITDWPLKLKPFYIHE
                     NEDDPFLSYSFDLQIGYLELISGGTRQHNPDKIKKRLIEQGLNPDNFSEHLKTFHWGM
                     PPHSGCGLGLDRLMMAITNSTNVREVVLYPRDPDRLNP"
     gene            complement(3575..3997)
                     /locus_tag="VLA74_15000"
     CDS             complement(3575..3997)
                     /locus_tag="VLA74_15000"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HSF52064.1"
                     /translation="MDSIILSISDYNLTHLERLAKDSIPLECCALLLGKKNSLTNYSV
                     KNIIITNNFSKSSTFFTVHPKDLITFYEKSKSMNLDVISIFHSHPSIPYPSTTDLRYM
                     EINPVIWLIYSTTEFSFKAFLLSEEKKIIEVLINRIKD"
BASE COUNT         1492 a          590 c          683 g         1383 t
ORIGIN      
        1 tatctaatgg gatccagtgt aattcttttg cgtcatcccc agcgtttggc tcacctccat
       61 gtatagtggt aatgaaaaca acagttatca tatgtcctct tggatctcgt ttagggttag
      121 aataaactcc aagaatttca ataggatgaa tttctagaga tgtttcttca aaaacttccc
      181 ttattaacgc ttcttctact gtttcacctt catcaacaaa tccacctgga agggcaaaag
      241 tatccttata aggatcattt tgtcttttaa tcaccaataa aaaagatgat ttttgaatta
      301 tggcatcaac tgttggtcta ggatttctat attctttcat atgactaaat atcaaggatt
      361 attttaaaaa tattatatat aataagtgtg aaagaccagt atgcaacttt tatggagaga
      421 agaatggctt aagcctttaa tagattatga gataagttct gaagagtgta atttctgcaa
      481 aaaaaagttc ctagattttt cttttgtaac ctcatgtgaa ttctgtgaca taggaataat
      541 gcatgattat tgtgcgaatt cacatttagt gggtattcat taccaggagt tgataaaaaa
      601 aacaaaaaga tacaaggaaa aacaattaca tgatttccaa taatgtatag ttaaattaga
      661 aatatatttt cattcctcat agagccaaca ttttacataa ccgtctttcc caattttata
      721 atctggggga ttattcatac attttttcat tgcatgttca cactctgagt aatacttaca
      781 accattggaa ttgattttat cattcaatat aggcaattta tctccgttta gatttacttt
      841 tttaactata aattcagctt tgatatctgg aatctgtgat atcaaagatt tagtgtaagg
      901 gtgttttgga ttaaatatta tctctttggt agagtttatt tcaacgagtt cccctgcata
      961 cataattcct atcttgtcta ctaattgtgc aattaatgga atatcatggg aaattaatat
     1021 aatacttatc tgtttttctt tttttaattt ttttaagaga ttaataatct gagcttgaat
     1081 caacacatcc aaagcagtag ttggttcatc agcaataatt acctctgggt caagcaataa
     1141 agccatggca atgattatcc tttgtttcat tccaccactt aattcatgag gatatttatc
     1201 aagtattgat ttatccaacc caaaatcttt aaaaatttgc agtattttct ctaaattttc
     1261 tttttctcta tgcgctaaaa atataccatt tatttgagat tttattttat aaacagggtc
     1321 caatgaattc attgcacctt gaaatatcat ggaaattttt ttccacctta tcttcaaact
     1381 gaaatcctta tcagataatt tagaaatatc ttcgtcatta aaaaatatgc tacctgattc
     1441 tatttttccg ggataactga tatttttcaa tattgctgat gctaaagtac ttttaccgca
     1501 tcctgattct cctgcgattc caaaagattc tcctgcatta agacaaaagg atacgttgtc
     1561 tactgctcta atagtcagat tatgtaggta atatgaaaca cttaaatctt taacaactaa
     1621 tcgctttccg gaaggcagtt tattattttt atcccaagag atattttaat tttcagatat
     1681 ttattctaga tatatatact ggataaaaaa agaattgaat ataaagaaaa attgaaaact
     1741 cctatttgtt cttttgatgc taaaactggt atattgtgtt caaaatgtga atccaaatta
     1801 aaatcaggtc atcttacaga aggcgatgta gaagcatcga taaaattaac gaagttagca
     1861 gaaaaaaata atactatcga taaattcacg ttaactggag cgtataagct tgacgaaggt
     1921 ttgataatgg ttcttcccag tccagatatc agtatcataa gatctgatga aaatataatg
     1981 aataaaatta aagaagaatt taaagaaaat atttggatta ttgagacggg ggcgactgaa
     2041 aagagattca ttgagaattt agtatatcct gtcaaaatag attctataaa cctagtatgg
     2101 ttaccagatg gtaacaaact tacaaagata gtgatatcgg aaaaaaagaa taaaaataaa
     2161 attatggaag aagtcaagat aaaagcaatc gccagcaaga taaaaaatat tgagctatta
     2221 atagaatatg tcaagaaata atttttacta caaggaaaaa atgaaataaa ccataaaaac
     2281 cattataaaa tattgaaaaa aagaaataaa aggactcatt actctaatca gctaaatgaa
     2341 aagatgattg gtaatagggt gaatgtcgga ggatggattg aggacttgcg agatatagga
     2401 aaaataattt tcttaataat tagagatata actggaccga ttcaaattgt tgtaaattct
     2461 gatgattttc cagaaataaa ggaaattcct aggcaaagtt cggtacttat ttcaggaata
     2521 gtacagaaaa gcagagcaag ggaaattaaa gtcgaactaa agctcgataa gataataact
     2581 atatcatatg cccagcaccc tcttccaata gatccaaccg gaagactaga atcggctatt
     2641 gataagagac tggattcaag agcacttgat ttgcgaaata tgtatgtttc aaggctgttc
     2701 attattaggt caattgctct cgagatcata agaaagacct taagaaaaaa aggctttata
     2761 gaagtaaaca ctccaaaaat tataggaagt gcaagtgaag gaggagctaa tttattctct
     2821 tttgattatt ttaagaaaaa agcttatctg gcccagagtc ctcaattata taaggaacaa
     2881 ttaattcttg cgttggatcg tgtcttcgaa atagctccat attttcgagc tgaaaattcc
     2941 aatactgtta ggcatctaac cgaattccaa agtgtcgata ttgaagcagc atttgttgac
     3001 taccatgaga tcatggaaat aatggaagaa acaataaaaa atgtcatcag taaaatacgg
     3061 aaagatgatt taattaattt agacaataat gaaaagataa aaactgcatt ggagtcgaaa
     3121 tttgaaattt tgccttacaa agaatgtgtg gtagagctaa gaaagattgg agaggatata
     3181 gaatatggag atgacctttc agacacatcc ttaagaaaat tagggcaact acatccagga
     3241 ttttacttca taactgattg gcctttgaaa ttgaagccat tttatattca tgaaaatgag
     3301 gacgatcctt ttctttcata ctcctttgat ttgcagattg gatatttgga attgatttcg
     3361 ggtggaacgc gacaacataa tccggataag atcaaaaaaa gattgataga acaaggcctc
     3421 aacccagata atttttccga acatttgaaa acttttcatt ggggaatgcc tcctcattct
     3481 ggatgcgggt tgggtctgga taggctgatg atggcaatta cgaattctac gaatgtacga
     3541 gaagtagtac tttatccaag ggatcctgac aggcttaatc cttaattcta tttatgagta
     3601 cttcaataat ttttttttct tcacttagca agaaagcttt aaatgaaaat tccgttgttg
     3661 aatatattag ccaaataact ggatttattt ccatatatct taggtcagtt gtagagggat
     3721 aaggtattga tggatgagag tgaaatattg atataacatc caaattcatt gacttggatt
     3781 tttcataaaa ggttatcaaa tcttttggat gtactgtgaa aaatgtagaa gactttgaga
     3841 aattatttgt tattatgata ttttttacag aataattagt taaagaattt ttttttccta
     3901 aaagcaaagc acagcattct agaggaattg aatcttttgc caacctttct aaatgagtta
     3961 aattataatc acttatagaa agaattattg agtccataat gacaatttaa ataaaacaaa
     4021 ataaattttt ttttaaataa aaaagaatag tcagaagaat ttgcttttct gttttttttg
     4081 tcgaatgaaa tctttatttt aaaaaaaatt agctagagcc atactctgta atgaactggg
     4141 tttctaga
//
LOCUS       DATIAS010000744         2398 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1630440, whole genome shotgun sequence.
ACCESSION   DATIAS010000744 DATIAS010000000
VERSION     DATIAS010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630440"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VLA74_15005"
     CDS             <1..630
                     /locus_tag="VLA74_15005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52065.1"
                     /translation="KLTGNHPIRIERKNQHAYDTILHPKLIFNANQLPISPDNSDAHF
                     RREIILSFPNQFEGEKEDPDLLKKLSTEEELSGIFNIIAIALKRILEKQKIHINEKTI
                     KERREKAELIYDSVGSFLKDAVAEDSTESDCVTKDDFHIAYSRFCKFHKLPVEQKEIF
                     GKILKQKYNYQDGRETKGEKRKTIWKGRRLIKWNSNDPLQDILILSNDK"
     gene            complement(964..>2398)
                     /locus_tag="VLA74_15010"
     CDS             complement(964..>2398)
                     /locus_tag="VLA74_15010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52066.1"
                     /translation="NFSPTLRYNPFENRSDEDIFSWKNKKKNNSQTKVGSSIIDILND
                     CGYSYDIQKHNRSKPNLVMINLISPRIDYAGRNKSYIKLDHFVSSSQEIYNFCKSASP
                     RNKNKNNSGDGSSNGANEGTMIYHLRKLLIKRYHDVKDNPDLIKTDRWTLSTVFYRLR
                     PILIEKGIPVNRKSITGAIDRVCKNDLPTKCKRHEIGIITAARAQLYFNGKSHGVSID
                     EISNLMEMGTDLVIIEKEGAVEVLGPFADKYGIALLYTRGFLTEYALELSEKSGSNIV
                     ILTDFDASGLLLASKLPGNIHRIGVDFQTLEELDIDIELVQEPYESKDGGHYDALQNI
                     AKNNPLYPIVKESIRYLRHHRIEIDSVLAKLDNNELFWDFILDKLVDIFPTRNYNRSI
                     DVKESIMPEKLEEFITNITDLISQIQKAEREKIKKELENTDGFINNIEMKKEEIENRL
                     RSVVENDNGIKEILSDCKELNRKHFNK"
BASE COUNT          830 a          367 c          325 g          876 t
ORIGIN      
        1 aaactaactg ggaaccatcc tataaggata gaaagaaaaa atcaacatgc atatgataca
       61 attttacatc ctaaattgat ctttaatgct aaccaattac caattagtcc agataattcg
      121 gatgctcact ttcgacgaga aattattctt agttttccta atcaatttga gggggaaaaa
      181 gaagatccag atttactgaa gaaattatcg actgaggaag aattatctgg aatattcaat
      241 ataattgcaa ttgcattaaa aagaatactc gagaagcaaa aaatccatat aaatgaaaaa
      301 actataaagg aaagaagaga aaaggccgaa ttaatttatg attctgttgg ttcgttcttg
      361 aaagatgcag ttgcagagga ttctactgaa tccgactgtg tgacaaaaga tgactttcat
      421 attgcatatt caagattttg caaatttcat aaactaccag tagaacaaaa agaaattttt
      481 ggtaaaatat taaagcaaaa gtacaattat caagatggga gagaaacaaa aggagaaaag
      541 agaaaaacaa tctggaaagg aaggcgttta atcaaatgga atagtaatga tcctttacag
      601 gatattttga tattatcaaa tgataaatga gcaagaattt tatttatttt gtcgtcatag
      661 ttcgtcatag ttgtcatagt acaacttcaa tcagaaaaac aaaaaaatat ttttatattt
      721 tccactattt tattctgata ttgatttaaa ccatgacaac tctgacaact ctgacgaata
      781 caacaaaaac atctattttt agaattgcta attagtcttt gtagaaatca aaaaccatat
      841 gttcaataac aaagatattt actaatatta atctccatta aataataata ttcatatcaa
      901 atcagtacag tctttactaa tgctttttca aattttatac tgtgaatgta tttattattt
      961 atattatttg ttaaaatgtt ttctgttaag ttccttacag tcagataata tctcttttat
     1021 accattatca ttttcaacaa cagatcttaa tctattttct atctcttctt ttttcatttc
     1081 tatattattg ataaatccat ctgtattttc aagttccttc tttatcttct ctcgttctgc
     1141 tttttgaatt tgagaaatta aatctgttat atttgtaata aattcttcta atttttctgg
     1201 cataatagat tctttaacat ctattgatct gttataattc ctagtgggaa aaatatctac
     1261 aagtttatca aggatgaaat cccagaataa ttcattatta tcaagtttag caagaacact
     1321 gtctatttct atacgatgat gacgtaaata tcttattgat tctttcacta ttggatatag
     1381 tggattgttc tttgcaatat tttgaagggc atcataatga ccaccatctt tagactcata
     1441 gggttcttgc actaattcga tatctatatc aagttcttca agagtttgaa aatctacacc
     1501 tattctatga atgttcccag gtaatttact tgcaagtaat aatccagatg catcaaaatc
     1561 agttaaaatt actatattag aacctgattt ttcagataat tcaagtgcat actctgtaag
     1621 aaagccacga gtatataata atgcaatacc atatttgtct gcaaatggtc ctaaaacttc
     1681 tactgcacct tctttctcga ttattactaa atcagtaccc atttccatta aattggaaat
     1741 ctcatcaata ctaacaccat gagatttacc attaaagtaa agttgtgctc ttgctgctgt
     1801 gataattcca atttcatgtc ttttgcattt agtaggcagg tcatttttgc atactctatc
     1861 tattgcacct gtaatggatt ttctatttac aggtatacct ttttcaataa gtattggtct
     1921 cagccgataa aatacagtac ttagggtcca tctatctgtt tttattagat caggattatc
     1981 ttttacatca tggtatcgtt tgatcaataa ctttcttaaa tgataaatca ttgtaccttc
     2041 attggcgccg ttgctactgc catcaccact attattctta tttttatttc gtggtgatgc
     2101 tgatttacaa aaattatata tttcttgaga actagaaaca aaatggtcta acttgatata
     2161 tgatttatta cgaccagcat aatcgatcct aggagaaatt aaattaatca taacgagatt
     2221 aggtttagat ctattatgtt tttgtatatc ataagaatac ccgcaatcat ttagaatatc
     2281 aataatagaa cttcctactt ttgtttggct attattcttc tttttgtttt tccaggaaaa
     2341 tatatcttca tcagatcgat tttcaaaggg attatatctt aatgttggtg agaaattt
//
LOCUS       DATIAS010000745         2253 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1358764, whole genome shotgun sequence.
ACCESSION   DATIAS010000745 DATIAS010000000
VERSION     DATIAS010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358764"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            310..876
                     /locus_tag="VLA74_15015"
     CDS             310..876
                     /locus_tag="VLA74_15015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52067.1"
                     /translation="MLFRKLLLVYRLKHFKDPIPDLNIGVEGRDKELVKHSIQLFYGC
                     ECLEEVQETLQYFLDLKNEKKESTIESILLQIVAELVKYEGTEISSQSIWNTLMEEIP
                     GMPNEKNPNEYHTNDYGTIYRTSTLPSYLGDSFGGKVKHTKKGNVWIFNRDTIESLAK
                     EDKSRITISEVNESEGVKAVNTPEEGGS"
     gene            1088..1738
                     /locus_tag="VLA74_15020"
     CDS             1088..1738
                     /locus_tag="VLA74_15020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52068.1"
                     /translation="MTLQQYPPQLLDNEIESGLDFILTHFDQQQEQFLFPRKISTYKS
                     NNKQFLVRSTQAIIDAFRDSNFVDCKINAYPFLTEYKGISRYKPNFIFVDVDKTDFKS
                     GRSCKLALSNTLKNIKEKLVEGYPTVLFTGGGYHIYQPVYIPTALENITEFQKFEKPS
                     QEFLRFAKDYLSNGKADKNSNPSLKSCLLRIPGSINSKYNTKVTIVQKWNGYRPPI"
     gene            1788..2153
                     /gene="priX"
                     /locus_tag="VLA74_15025"
     CDS             1788..2153
                     /gene="priX"
                     /locus_tag="VLA74_15025"
                     /inference="COORDINATES: protein motif:HMM:NF037089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase noncatalytic subunit PriX"
                     /protein_id="HSF52069.1"
                     /translation="MNIVIDKKILKARRYNTNNNNIIFWIEKLLNTPIADFRKNALIL
                     ILAPYLILIKKLPYQESFDILSEWLKKCDSIRKLDFINSSDQQVKSALNTAIKKRILP
                     MKLETLKNKNLELYKKFYK"
BASE COUNT          904 a          310 c          351 g          688 t
ORIGIN      
        1 tatggtttta gaggaagccg ataaaatcga taagataact gagttaatgg cagttttaaa
       61 aactggctac tcttattatg gatcggttcc taagataaat ccttatactc aaacaggaat
      121 ttttctttag ttattgtcca aagattatag tatctgaaag atcactaaat catgccattg
      181 ctaagggtgt caactctaga acatttccaa ttaattgtat caagggaagt acaaaacatg
      241 acatcaaaga aatcttgaat ccaactaata cacgtggctt agaaaaataa aaatatattg
      301 caagaaatta tgctatttag aaaattatta ctagtttaca gactaaaaca tttcaaagat
      361 ccaattcctg atttaaatat tggagttgaa ggcagggaca aagagttagt aaagcattct
      421 atccaattgt tttatggttg tgagtgttta gaagaagtac aagagacttt gcaatatttt
      481 ctagacttaa agaacgaaaa gaaagaatct acaattgaat caatactact gcaaatagtt
      541 gcagagttgg ttaaatacga aggaactgag atatcttctc aaagtatttg gaatacattg
      601 atggaagaaa ttcctggtat gccaaacgaa aagaatccta atgagtatca tacaaatgac
      661 tatggaacaa tatatcgaac ttcaacatta cctagttatt taggtgattc atttggagga
      721 aaagtaaaac atacaaaaaa aggcaatgtc tggatcttta accgtgatac tattgaaagt
      781 cttgcaaaag aagacaagtc aagaataaca attagcgaag taaatgagag tgaaggggtg
      841 aaggcggtga atactccaga ggaagggggg tcgtgatttt gaaaaaaaat tttatagata
      901 aatttaatca acagaataat gttatagaag aatcagactc catttggagt ccgaatgttc
      961 tagaagattc ttctaataat aatgagattt taagagtaaa aaatatttta aaaataggta
     1021 ccccccttac cctagagcct tcactgtatt cacctattca ccataactgt tttatggaga
     1081 aggtaaattg acgttacaac aatatccacc acaactttta gacaatgaaa tagaatcagg
     1141 tttagacttt atcctaactc atttcgatca acaacaagaa caatttttat ttccaagaaa
     1201 gatatcaact tacaagtcaa ataataagca gtttctcgta agaagcacac aagcaattat
     1261 tgatgcattt agagattcta attttgtaga ttgcaaaatc aatgcttatc cttttttgac
     1321 agagtataaa ggaatatcta gatacaaacc aaattttata tttgttgatg tagacaaaac
     1381 tgatttcaaa agcggtagaa gttgtaaact tgcattatca aatactttga aaaatatcaa
     1441 agagaaatta gtagagggat atccaactgt tttatttacc ggtggaggct atcatatcta
     1501 tcagcctgtt tatattccga ctgctcttga aaatattacc gagtttcaaa aatttgaaaa
     1561 gccatcacaa gaatttctaa gatttgcaaa agattatttg tcaaatggta aagcagataa
     1621 aaatagtaat ccttccttaa aatcatgctt gttaagaata cctggatcta taaattctaa
     1681 atataatact aaagtcacaa ttgttcagaa atggaatgga tatagacctc ctatatagga
     1741 agaactttta gaagatttta gaacctattt aatacaaaaa aagattgatg aatatcgtta
     1801 tagacaaaaa aattttgaag gcaagaagat ataatactaa taataataac attatattct
     1861 ggatagaaaa acttctcaat acaccaatag cagattttag aaaaaatgct ttaattctga
     1921 ttcttgctcc ataccttata cttatcaaaa agttaccata ccaagaatca tttgatattt
     1981 tgagtgaatg gttaaagaag tgtgattcaa taaggaaact tgattttatt aattcaagcg
     2041 atcaacaagt aaagtctgct ttaaatactg caattaaaaa aagaatacta cctatgaaat
     2101 tagaaacatt gaaaaataaa aatttagaat tatataaaaa attttataaa taaaatatta
     2161 aattctggaa aagaataata gtaatactat gttacaaaat tctggtaaac aaaaacagcg
     2221 ttaccaaaat ttacccctag cactatattt ttt
//
LOCUS       DATIAS010000746         5420 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1358791, whole genome shotgun sequence.
ACCESSION   DATIAS010000746 DATIAS010000000
VERSION     DATIAS010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 5420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5420
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358791"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /locus_tag="VLA74_15030"
     CDS             <1..685
                     /locus_tag="VLA74_15030"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HSF52070.1"
                     /translation="AMYLYFVLWPGCSIREVSLEVVVPFPRCYRFIRTVMEKILSSSS
                     SSSAKLGDNVEGDEFYIKTGLKGRSYHDEIVKSVGRKPKKRGLKPWRGRGTFYKDHPM
                     ITCIHQRRNGMTYFDVPLRQSLLDIICTRVQYGSTVFTDEYRAYDQLEEHGFIHKSVT
                     HSQKEYANGNVHVNNCECRSNLYQLWIRKFMGVNKYNLQGYSKVFQFIHNNRTKTRKE
                     RFMEILCYQ"
     gene            1112..2377
                     /locus_tag="VLA74_15035"
     CDS             1112..2377
                     /locus_tag="VLA74_15035"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSF52071.1"
                     /translation="MKIFLILPILLFSLYSLIFILCNDDSSFFTIHGQPDIKTTKSRD
                     IVIDLGNSIKTNARLSIPIIGNGPFPGVLLVQGSGAIDMNTRPSVQIAEYLSERGFAV
                     LQYNKRAIGEINTILDSNLWGNITFNDLQQDAEKALDVFIQQPEVDANRITILGHSQG
                     ATITPRVAIDNPDKVKNIVLMSVLAQNLSKIIELQGVTTPVQYAKEVLDHNHDGLFSL
                     QEANKDPFFRDMVGNLLIHPTQQNNTITTTANDTTISTSSSSLEQQQLNSKYNTNSDV
                     YVSIDNELKPKLLDIIQSLSVVKPGMKCIDINSCPIWIKSEYALQPNLNIIGNVSSNT
                     SILILQGENDMQTPVQQAILLQQKLTDVKHPDHILITYPNLGHFFYPSSQLLTEVGPI
                     QENVLKDLYLWLESHSGLIPLMRTTNSFQ"
     gene            2632..3870
                     /locus_tag="VLA74_15040"
     CDS             2632..3870
                     /locus_tag="VLA74_15040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52072.1"
                     /translation="MKRIGTSERYQNNNLKAIIAYSKFLEPSISFAQVKNKSQIISFL
                     DTKIKNSEGDPDKRWITTWNDYLVRIKYFFRWMYNCKDKDEYENISFSEWLTPDFVQI
                     KKKKTKRISPYLENELWEREDLLTIIKYESYKRNKAILTLLWDLDARPHEITLLKIKH
                     IRLKEKYGEGEIPYEAKTGTGPILLTTSFPYVRDWLNEHPFRNEPNSRLICNLINGSP
                     ITPDNIDKVMKQLRERIIRLLENGEITNIEEKEKLQFLLKTKKWNPYCIRHSAITSDS
                     DYLPEYALKKKVRWSMNSRQGSRYIKRRMGNDLKQKILVYNGIVSENEIKKKPIVHLC
                     PRCELVNAIDNKYCSKCSYPLTAQAFEEIKVEENAKISSLEKKVEETNHRMIQILSII
                     QQIPSLSHIKPEALLQKEIE"
     gene            complement(3903..4742)
                     /locus_tag="VLA74_15045"
     CDS             complement(3903..4742)
                     /locus_tag="VLA74_15045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52073.1"
                     /translation="MNSDERQRKIIEFVETHPGCLTERAIEALEQFMSRKTFFKELDI
                     LKEKGEIIVKNKNKRDKELYVDKNNLLITVPKELEQFEKDFLDLAETISFKLNALFLV
                     KNLNKVSKGKGKSKKINLTQTEIYLASYILLLKILFRIIDSYIFRFLIKWPSSNLKEE
                     DKVQLFTIIFSRISKIILKFPEFFRLLTLKNGHPDLYPEINKRLEGAKFLFSTQKIFS
                     IFPIEDQVNKVIDNIWNIDGEIREFIYQEPKQCKFDFDYKKDDWKHLVKKYEPHFEPN
                     KNL"
     gene            4808..4963
                     /locus_tag="VLA74_15050"
     CDS             4808..4963
                     /locus_tag="VLA74_15050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52074.1"
                     /translation="MNNFQKDKGTVLIKDETKDRLKKSGFKGQTYDEIINELLDLKFK
                     HEQLNNN"
     gene            4979..5170
                     /locus_tag="VLA74_15055"
     CDS             4979..5170
                     /locus_tag="VLA74_15055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52075.1"
                     /translation="MNNNNNSSIQYQNNKVTICEKVSCSSYATTKIKVNVKDIGSITL
                     LLCDQCKLLFSDIGEKINE"
     gene            5163..>5420
                     /locus_tag="VLA74_15060"
     CDS             5163..>5420
                     /locus_tag="VLA74_15060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52076.1"
                     /translation="MSEYNDLLQELRSKIIDLQKPIIATAKEYIPKMYKAILKENPNL
                     TPIEAREKIEKDCREELWSKRTIIAALPDEAKNLEKQKAGRQ"
BASE COUNT         2064 a          791 c          835 g         1730 t
ORIGIN      
        1 ggcaatgtat ctatactttg tactctggcc tggatgttct ataagagagg tatcgcttga
       61 ggtagttgta ccatttccaa gatgctatcg atttatcaga acagttatgg aaaaaatatt
      121 atcatcatca tcatcatcat ctgctaaact cggtgataat gttgaaggtg atgaattcta
      181 tatcaagaca ggattgaaag gtagatcata tcatgatgag atagtaaaat cagtaggaag
      241 aaaacccaag aaaagagggc taaagccatg gagaggtaga ggtacatttt acaaggatca
      301 tccaatgata acatgtattc atcaaagaag gaacggaatg acatattttg atgttccttt
      361 acgacagtca cttcttgata ttatatgtac cagagtacag tatggttcaa ctgtatttac
      421 agatgaatat agagcatatg accagctgga agaacatggc ttcatacaca aaagtgtaac
      481 tcattcacag aaagaatacg caaatggtaa tgtgcatgtg aataattgtg aatgcagaag
      541 caacctgtac cagttatgga taagaaagtt catgggtgta aacaagtaca atttacaggg
      601 atattccaag gtatttcagt ttattcataa taatagaaca aagacaagga aagaaagatt
      661 catggagatt ctttgctatc agtagctgaa acattcagaa ataagagcga ttatctttat
      721 tgtttctata tagtctaaga tagatgttac cagaataaga gataactaaa gatgtaaaac
      781 ctctccaatg tatttgatat aaaaaatttt tctttactat tcatgaatga atgtttcttc
      841 ttctatcttt atcctcttag acgatctata ttaaattcag gatcaccata ttcggacact
      901 tttgattttc tttcatgtac ttttttatga ttttccaagc gtctcttatc ttcaaaagtc
      961 atattgcatt ttttgcattt gaaagatgac atagagatat aatagacaaa tagtaaaatg
     1021 taaataaata cattatgact gattctggat aatcatagta tgatcataga tatcaaatat
     1081 attatatagt tcctatttac cgatatacat attgaaaatt tttctgatat tgccaatact
     1141 tcttttttct ctttattctc ttattttcat attatgtaat gatgacagta gtttttttac
     1201 tattcatggt caaccagaca ttaagacaac aaaatctaga gacatagtaa tagatttggg
     1261 taatagtata aagactaatg cacggctgtc aattcctatt attgggaatg gaccatttcc
     1321 aggtgtcctt cttgtgcaag gatctggtgc aatagatatg aatactagac catcagttca
     1381 aatagctgaa tatctttcag aaagaggatt tgcagtatta cagtataata aaagagctat
     1441 aggtgaaatt aatacaatct tagatagcaa tttatgggga aatataacat ttaatgatct
     1501 acaacaggat gcagaaaaag ctctagatgt tttcatacaa cagccagaag ttgatgctaa
     1561 tagaataaca atattaggac atagccaagg tgccaccata acacctagag tcgcaattga
     1621 caatccagat aaagtaaaaa atattgtgct tatgagtgtg ttagcacaaa acctgagtaa
     1681 aataatagag ttacaaggag taaccacacc agtccaatat gctaaagagg tactagacca
     1741 taatcatgat ggattatttt cactacagga agcaaataag gatccctttt ttagagatat
     1801 ggttggaaac cttctcatac atcccacaca acaaaataat actattacta ccaccgctaa
     1861 tgacacaact atatcaacat cttcatcatc attggaacaa cagcaattga attccaaata
     1921 caatacaaat agtgatgtat atgtaagcat tgataatgag ctcaaaccta aactattaga
     1981 tattattcaa tcactttcag ttgtgaaacc aggtatgaag tgtatcgata ttaattcatg
     2041 tcctatttgg ataaaatcag aatatgcttt gcagcctaac ttgaatataa ttggcaatgt
     2101 ttcttctaat acaagtattt taatacttca aggcgaaaac gatatgcaaa ctccagtaca
     2161 gcaggcaatt cttttacagc aaaaactaac agatgtaaaa catcctgatc atatattaat
     2221 aacgtatcca aatcttggtc atttcttcta tccttcatct caattgctga ctgaagtagg
     2281 tccaatacaa gaaaatgttt taaaggatct ttatttatgg cttgaatctc attctgggct
     2341 gatacctctt atgaggacta ccaattcttt tcaatgaatc taacctctca gaatgcataa
     2401 ttactttatc tgataaattt gcaattgaac actgaaacaa tgtctattca actcccgacg
     2461 ggcccgttat gtattcgggt tcatatacat gttttataga tataataaac atagaaaaga
     2521 agaggaggct caagaaagac gacagttaag ctatctacaa caatcaacaa tattgaaagg
     2581 gatgttctca atccagaaaa caagcaatta cttgtacaat tctacgagtt tatgaaaaga
     2641 attggtactt ctgaaagata tcaaaacaat aacctaaaag caattatagc ttatagtaaa
     2701 tttcttgaac cctctatttc ttttgctcaa gtaaaaaaca aaagccaaat tatttcattt
     2761 ttggatacaa aaataaaaaa tagtgaaggt gatccagata aacgttggat tacaacatgg
     2821 aatgattatc ttgtaagaat aaagtacttt ttcagatgga tgtacaactg taaggataaa
     2881 gatgaatatg aaaatatttc attttcagaa tggttaactc ctgattttgt acaaataaag
     2941 aaaaagaaaa caaagaggat tagcccttat cttgaaaatg aattatggga aagggaagat
     3001 ctattgacca taataaagta cgaatcttac aagagaaata aggcaattct tacattgctt
     3061 tgggacttgg atgcacgacc tcacgaaatt acattattaa aaataaaaca catccgttta
     3121 aaagaaaaat atggcgaagg tgaaatacca tatgaagcaa aaacaggaac aggtcctata
     3181 ctacttacta cctcatttcc ctatgtcaga gattggttaa atgaacatcc cttcagaaat
     3241 gaaccaaatt caagactaat ttgtaatctt attaatggtt caccaataac tccagacaat
     3301 attgataaag taatgaaaca actacgtgag agaataatcc gattgttaga aaatggagaa
     3361 attactaaca tagaggaaaa agagaaacta cagtttttat taaaaacaaa gaaatggaat
     3421 ccatattgta ttaggcatag tgcaataacc tcagattcag attatttacc agaatatgcc
     3481 ctaaagaaaa aagttagatg gtctatgaat tcaagacaag gttcacgata tataaagaga
     3541 agaatgggta atgatctcaa acaaaaaatt ctagtttata atgggatagt ttcagaaaat
     3601 gaaattaaaa agaagccaat agttcatttg tgtccaagat gtgaattagt gaatgctata
     3661 gataataagt attgttcaaa atgcagttat ccattgacag ctcaagcatt tgaggaaatt
     3721 aaagtagaag agaatgcaaa gataagttct ttagaaaaaa aggttgaaga aactaaccat
     3781 agaatgatac agattttatc tataattcaa caaattccat cacttagtca tataaaacca
     3841 gaagcactat tgcaaaaaga aatagaataa ttttttattt ttgttacctt atatctatag
     3901 aattacaaat ttttatttgg ttcaaaatga ggttcatact tttttactaa gtgtttccaa
     3961 tcatcttttt tgtaatcaaa atcaaattta cattgttttg gttcttggta aatgaattca
     4021 cgaatttcac catctatatt ccatatgtta tcgatgactt tattcacttg atcctctatt
     4081 ggaaatatag aaaaaatttt ttgggttgag aataggaact ttgcaccttc taaacgttta
     4141 tttatttctg gatataaatc gggatgacca tttttcaggg ttaacaatct aaaaaattca
     4201 ggaaatttaa gtataatttt tgatattctt gaaaagatta ttgtaaaaag ttgtactttg
     4261 tcttcttctt taagattgga agaaggccat tttattaaaa aacggaaaat ataggaatca
     4321 atgatacgga ataaaatttt taacaataaa atataagaag ctaaataaat ctccgtttgt
     4381 gtcaaattta tctttttgga tttccccttt ccttttgata ctttattcaa atttttaaca
     4441 aggaataatg catttaattt aaatgaaata gtttcagcta agtctaaaaa atctttttca
     4501 aattgttcca attcttttgg aacggttatt agaaggttat tcttatctac ataaagttct
     4561 ttatctcttt tatttttatt ttttactatt atctctccct tttctttcag tatatctaat
     4621 tccttaaaaa aggtctttct tgacatgaat tgttcgagtg cttcaattgc tctctctgta
     4681 agacatcctg gatgagtttc aacaaattct attatttttc tttgtctttc atcactattc
     4741 atttaatata tcatagtata ttagtgtact catttataca tatctattag ttattctaac
     4801 atagaatatg aataattttc aaaaagataa aggaactgtt ttaattaagg atgaaactaa
     4861 agaccgattg aaaaaatcag gatttaaggg ccagacctat gatgaaatca tcaatgaatt
     4921 attagatttg aaattcaagc atgaacaatt aaataataat tgaagagctg aaactaaaat
     4981 gaataataat aataatagta gcattcaata tcaaaataat aaagtaacaa tttgtgaaaa
     5041 agtcagctgt tcttcgtatg caactaccaa aattaaagtc aatgtcaaag atattggctc
     5101 aataacacta ttactttgtg accaatgcaa attacttttt tcagatatag gtgaaaaaat
     5161 aaatgagtga atataacgat ctacttcaag aattaagatc aaaaatcatt gatttgcaaa
     5221 aaccaataat cgctactgct aaagaataca ttccaaaaat gtataaagca attttaaaag
     5281 aaaatccaaa tttaactcct atagaagcta gagaaaagat agaaaaagat tgtagagaag
     5341 agttatggag taaaagaacc ataatagccg ccttaccaga tgaagcaaaa aatttagaaa
     5401 aacaaaaagc cggaagacag
//
LOCUS       DATIAS010000747         3208 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1630622, whole genome shotgun sequence.
ACCESSION   DATIAS010000747 DATIAS010000000
VERSION     DATIAS010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630622"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VLA74_15065"
     CDS             complement(<1..332)
                     /locus_tag="VLA74_15065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52077.1"
                     /translation="MSDQQQNYISEKFTHGDPYESFLYALKAPETKRQYPKRLKVVFD
                     YLVSINELKEIRLENQCKEVFSKTLQNPHWLTSCLMRFIIFQNERIQRKEIVAITAYN
                     YIRSLKLF"
     gene            complement(389..463)
                     /locus_tag="VLA74_15070"
     tRNA            complement(389..463)
                     /locus_tag="VLA74_15070"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(426..428),aa:Arg,seq:tcg)
     gene            883..1086
                     /locus_tag="VLA74_15075"
     CDS             883..1086
                     /locus_tag="VLA74_15075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52078.1"
                     /translation="MKIPVEERKKYVISLRKRGYTERQIAKELHMSTRDVTKILKENK
                     REEKEAREREIIEKEENEKERLF"
     gene            1105..1839
                     /locus_tag="VLA74_15080"
     CDS             1105..1839
                     /locus_tag="VLA74_15080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52079.1"
                     /translation="MKLYKKGTIPLDVAIELDISAEEAKAFYHGYLSLESPPQFLQLY
                     TELNNTNSFNSFTDLFYLLREKSLSIEEGIEAIEMNNDIFLLKEKHLDLYNSIENLKE
                     INGFLTSDNNFLRDQNEEMQNRLNSITEKIITEEKNLEIIRKKVIETEVELDKIKSGE
                     DYYEARKQIKFIIEFLGYRINVIHLAVLCLFNTIKEKNQKESPIKGLPKSVYEYLPDS
                     SDSDVYREKFQNVDEKLWDSYFRSMY"
     gene            2200..>3208
                     /locus_tag="VLA74_15085"
     CDS             2200..>3208
                     /locus_tag="VLA74_15085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSF52080.1"
                     /translation="MKVSERTTGVEYAIRDIITHAREYEKKHGKKGIYLNIGDPVQYD
                     FPTPDHIKNALIKAVQNNENYYTASEGLPELRQAIVEKEKKGKGFDVTENDVLVTNGV
                     SEALDMTLASVVSPNDEILMPGPHYPPYKSYVKFYGGKPVEFKIHSDGKPDIDYLKSK
                     ITSKTSAICLISPNNPTGEVFSYNDLKDIVDVAAQHDLYIICDEIYDKIVFDETFSGI
                     GSVSKDLPVILLNGFSKVYLMTGWRCGYMCINSSSPKLDDFRNNVPKLARVRIASNLP
                     VQKAAVEALRGPQHHIGEMVHKLKNRRNYIVKRLNSMPRVSCTLPKGAFYVFPKINLD
                     GR"
BASE COUNT         1249 a          445 c          526 g          988 t
ORIGIN      
        1 ataaataatt tcaaggaacg aatgtaatta taagcagtaa tagcaacaat ttcttttctt
       61 tgaattctct cattttgaaa tattataaat ctcattaaac aggaagttag ccaatgagga
      121 ttttgcaagg tttttgaaaa aacttcttta cattggtttt ctaacctaat ctcttttaat
      181 tcatttatag aaactaaata atcaaaaaca actttcaatc ttttgggata ttgtcttttg
      241 gtttctgggg ctttcagggc atacaaaaat gattcatagg gatcaccatg agtaaatttt
      301 tcagaaatat agttttgttg ttggtcagac aaagaaattc tcttattagt ttatagacat
      361 gggctgaatt taagcgtcgt tgtcaatacg ggctcggagg gcttcgatcc cacgacctgc
      421 ggttccgaag accgccgcga tatcctgact acgctacgaa cccattattc agtattatta
      481 aaatctctta attaaactaa accacagatt ttcgttatta ttcttaagtt taaaaattat
      541 atgatatcat tagataataa tatcactggt aaattataac tgaaaaatta acataaaaaa
      601 ttttggtagt aaattgaaaa caatcttgag gattgaaaac actaatacag ataatataag
      661 accaattttt agaagaaggt aatagctcct agtcatataa tatctttaga aaaataaata
      721 atttttgcat aatcaaatag aacagtattt taagattaac aattttttgg agaaaacaaa
      781 tgaaaacaat gaaaattcat ggtaacaatg aaaccaataa taataaagca aaaataagaa
      841 taaaaaaatg ataaaagcag aacgttataa atgtattaga gaatgaaaat accagtagaa
      901 gaaaggaaga aatatgttat aagtttgcgt aaaagaggtt atacagaacg gcaaattgcc
      961 aaagaactgc atatgtcgac cagagatgta accaaaattc ttaaagagaa taaaagagag
     1021 gaaaaagaag caagagaaag agaaataata gaaaaagagg aaaatgaaaa agagagatta
     1081 ttttagtcaa agagatcaga agcattgaaa ttatacaaga aaggaacaat tcctttagat
     1141 gttgcgatag aattagatat tagtgcagaa gaagcaaaag cgttttacca tggatattta
     1201 tctcttgaat ctcctcctca attcttacaa ctctatacgg aattaaacaa tacaaactca
     1261 ttcaattctt ttactgactt gttttatctt ttgagagaga agagtttgag tattgaagaa
     1321 ggaattgagg caattgaaat gaataatgac atttttttgc ttaaagagaa acatctagat
     1381 ctttataaca gcatagaaaa tcttaaggaa ataaacggtt ttctgacaag cgataataat
     1441 tttttaagag atcaaaatga ggaaatgcaa aatagactta attctataac agaaaaaatt
     1501 attaccgagg aaaaaaattt agaaattatt agaaaaaagg taatagagac agaagtagaa
     1561 cttgataaaa taaagtctgg agaagattac tatgaagcta gaaagcaaat caaattcatt
     1621 atagaatttt taggttatag aataaacgta attcacctag cagttttatg tctttttaat
     1681 actataaaag aaaaaaatca aaaagaaagt ccaattaaag gtctaccaaa atctgtttat
     1741 gaatatcttc cagattcttc agacagcgac gtttatcgag aaaaatttca aaatgtagat
     1801 gaaaaactgt gggattctta tttccgatct atgtactgat gatgttctaa atccttcttc
     1861 aaatatttca aaggattaaa aatgataata ccatgacttt ctatattagt ccagtccagg
     1921 taaattgatg tgagttatga atgaaaatac cgatacaaaa tttattaaaa tttccattta
     1981 tataaacaaa cacgattacc aatcatactc taatacctag aatcttgatt gtaaaattaa
     2041 attcagtctt atccatatat tttactagat ccactaatac atctttgttt tttgtgcagc
     2101 ttattatata ttgtaatata acatcaccac cactaatttg tttattactt gctttggaga
     2161 atactttatc taggtaattc gtaataagta gatactcaat tgaaagtttc agagaggaca
     2221 acaggtgttg aatatgctat tagagatatt attacgcatg caagagaata tgaaaagaag
     2281 catggaaaaa aaggaatata tctaaatatt ggtgacccag tacagtatga ctttcccact
     2341 ccagatcata taaaaaatgc attaattaaa gcagttcaga ataatgaaaa ttattataca
     2401 gcatcagaag gattaccaga actcagacaa gccattgtag aaaaagagaa aaaaggaaag
     2461 ggttttgacg taactgaaaa tgatgttttg gttacaaatg gagtctctga agcattggat
     2521 atgactttgg catccgtagt cagtcctaac gatgagatac ttatgcctgg tccccactat
     2581 ccaccataca agtcatatgt caagttttat gggggaaaac cagtagaatt taaaatccat
     2641 tctgatggaa aacctgatat cgactattta aaatccaaaa ttacttctaa aactagtgca
     2701 atctgtctca taagtcccaa caatcctaca ggtgaggtat tttcttataa tgatttaaag
     2761 gatatcgtag atgttgctgc ccagcatgat ctgtatataa tttgtgatga aatatatgac
     2821 aaaatagtat ttgatgagac attttctgga attggaagtg tatctaaaga tcttcctgtt
     2881 atacttttga acggcttctc taaagtctat ctaatgactg gatggcgctg tggttacatg
     2941 tgtataaata gcagttctcc aaaattggac gattttcgaa ataatgttcc caagcttgca
     3001 agggtaagaa tagcttcaaa tcttcctgtt cagaaagcag ctgttgaagc attgcgagga
     3061 ccacaacatc atataggtga gatggtacac aaattaaaaa atagacgcaa ttacattgtc
     3121 aaaaggctaa actctatgcc acgagtttct tgcactttgc caaaaggtgc attttatgta
     3181 tttccaaaaa ttaatttaga tggacgat
//
LOCUS       DATIAS010000748         2426 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1359377, whole genome shotgun sequence.
ACCESSION   DATIAS010000748 DATIAS010000000
VERSION     DATIAS010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1359377"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VLA74_15090"
     CDS             complement(<1..256)
                     /locus_tag="VLA74_15090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52081.1"
                     /translation="MINLYKINKLRHLNNNTVKKSILQGGIISSITIISYILIVIFTS
                     PNLPATTSIYAALEVNSPIIIGLTIGTGIQGFVISYRKKVI"
     gene            complement(391..1509)
                     /locus_tag="VLA74_15095"
     CDS             complement(391..1509)
                     /locus_tag="VLA74_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52082.1"
                     /translation="MKNLLQLNKRDAKNFSNVMAFAIIGSLLMITGPLLTTNKIVYAQ
                     QSDPSSVLKLAAANIPIDIPLIKEYVNGKEMYAIATDASDKDTADLITNKTGFKANVA
                     PVLSKTPTDVLGQAYIFKNGINGEGLFGFQSSVLNAKPGDNGYSPLYQLNIVEWVNQE
                     NVQELKSVDEISKLENNGQLKIERTNVVVNEPAVKWDGGELKIKEGEINDETPYGEGQ
                     VTKIDIENMVATFVAHRGWGPDGSTIYYIVTDAVPELPANMMGVVFAPSDEKLATTPS
                     AVDLTQFTNGINGTGPMGFQPGIGHAGPTDENYSPMWRINFAEWNDPIQAKLLQTLAD
                     LNDAREKGFLTIAPAMEGKHVVNCPFFDQQTVLKHMSK"
     gene            complement(1593..2252)
                     /locus_tag="VLA74_15100"
     CDS             complement(1593..2252)
                     /locus_tag="VLA74_15100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52083.1"
                     /translation="MKTLQIATFGTEEQEAIAFGIKNFPIHKLILICFHEDKNKAEEF
                     SRRIKSILGLPITITLVTKENVIRDTMDRINEILQLHSNEFEDILMNVSCGDKLLGCA
                     ALSTAFIHGVKAFGMDYTHTMPLMMPVLKLSYNEIISDAKKKILMAIDNAGVTVDSLD
                     QLEKISGFGKPLLSYHVQGSKDAKGLAELGLVDIEKGERNKISTNITTLGKLLISSKS
                     L"
BASE COUNT          762 a          395 c          319 g          950 t
ORIGIN      
        1 taataacttt ttttctatat gatataacaa atccttgaat tcctgttcca atggtcaatc
       61 caataattat aggagagttt acttcaagtg cagcatatat ggatgttgta gcaggcaaat
      121 taggagaagt aaatattact attaatatat aagaaataat agttatagaa ctgataatac
      181 ctccttgtaa tatggatttt tttactgtat tgttatttag gtgtcttaat ttgtttatct
      241 tgtataggtt aatcatgata tatgccaata taaagatctt ttatttaaca agatatttca
      301 atagttcaac aatatcttta acagtttaat tttgaaatta ataaaaagaa tgagaagaaa
      361 ttatatgatt gtaaatgcct tttcatttta ttatttgctc atatgtttta aaactgtttg
      421 ttgatcaaaa aatggacaat taacaacatg ttttccttcc atggctggag caatagtcaa
      481 aaatcctttt tctcttgcat cattgagatc ggctagtgtt tgcagtaact ttgcttgtat
      541 tggatcattc cactctgcaa agtttattct ccacattgga ctatagtttt catcagtagg
      601 tcctgcatgt cctatacctg gctgaaatcc cataggtcca gtaccattta ttccattagt
      661 gaattgagtc aagtctactg cagatggtgt agtagcaagt ttttcatcag aaggggcaaa
      721 gacaactccc atcatgtttg caggcaattc aggaactgca tcagtcacaa tgtaatatat
      781 agtgcttcca tcaggacccc atcctcgatg agcaacaaaa gtagcaacca tattttctat
      841 atcaattttt gtcacctgac cttctccata tggagtttca tcattaattt caccttcttt
      901 gatctttaat tctccaccat cccattttac tgctggttcg tttactacga cattagttct
      961 ttctattttt aattgtccat tattttctaa ttttgaaatt tcatctacag attttaattc
     1021 ttgtacattt tcttgattga cccattctac tatatttagt tgatacagtg gactatatcc
     1081 attatcacca ggtttagcgt ttaatacaga agattgaaat ccaaatagtc cctctccatt
     1141 aattccattt ttaaatatat aagcctgtcc taaaacatct gttggtgttt ttgataaaac
     1201 tggagcaaca ttggctttaa atcctgtctt gtttgttatc aaatcagcag tgtctttatc
     1261 tgatgcatca gttgctattg catacatctc ttttccattc acatattctt tgattaatgg
     1321 aatatcaatt ggtatattgg ctgcagcaag ttttaatacc gaacttggat cagattgctg
     1381 agcatataca atcttgtttg ttgttagtaa tggacctgta atcatgagca atgaaccaat
     1441 aattgcaaac gccattacgt ttgaaaaatt ttttgcatct cttttattta gttgtaatag
     1501 atttttcatt aattaaaaaa taaaattgat atataaaagt aataacttga agcattcaag
     1561 ttattattga acatgtaaaa acttcattta atttataatg acttactgct tatcaaaagt
     1621 tttccaagag ttgtgatatt agttgaaatt ttatttcttt ctcctttttc tatatctacc
     1681 agtcctaatt ctgcaagtcc ttttgcatct ttcgatcctt gtacatgata acttaaaagt
     1741 ggctttccaa atccagaaat cttttcaagt tgatctagac tatcaacagt tactccagca
     1801 ttatcaatag ccataaggat tttcttcttt gcatctgata taatctcatt ataactaagt
     1861 ttcaaaacag gcatcattaa tggcattgta tgagtataat ccattccaaa tgctttcaca
     1921 ccatgtataa atgctgtaga aagagcagca caacccaata atttatcacc acaactaaca
     1981 ttcatcaata tatcttcaaa ttcattacta tgtaattgta agatttcatt tattctatcc
     2041 attgtatctc taattacatt ttctttagta actaaggtaa ttgttattgg aagacctaaa
     2101 atgcttttaa ttcttcttga aaattcttcg gctttatttt tatcttcatg aaagcagatc
     2161 aatattaatt tgtgaatggg aaaatttttg ataccaaatg ctattgcttc ttgttcctct
     2221 gtaccaaaag tagcaatctg taaagtcttc aattaattat tttaatttct cttgatttaa
     2281 ttataaagta tatctttaac tgttcaattt tttgttaaat aacgaagtta taataatagc
     2341 agagtattct attttatttg aaatattttt atcttttagt attagttatt ctcaaattat
     2401 tattaaaaat ttttaattaa accatt
//
LOCUS       DATIAS010000749         2104 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1496730, whole genome shotgun sequence.
ACCESSION   DATIAS010000749 DATIAS010000000
VERSION     DATIAS010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496730"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VLA74_15105"
     CDS             <1..482
                     /locus_tag="VLA74_15105"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSF52084.1"
                     /translation="ADWQNMENTNDPGEKLSVDWSPNANNDVFTNIMVGVKQLAGKIE
                     QGGDTRVFTPLWNFNNPQKSTSVILHPLGGCNMGEDVNNGVVNSYGQVFWNDGSADKT
                     KVYPKLYVVDGSIIPEPLGVNPSLTISAVSFRAARHILVDISEVPLPPEEANKFLPK"
     gene            complement(1238..1525)
                     /locus_tag="VLA74_15110"
     CDS             complement(1238..1525)
                     /locus_tag="VLA74_15110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52085.1"
                     /translation="MDSPLWGVMRLTHDLPLWNVDESCVIHDTPSLLDWIIFYYNPIG
                     TCQVWENSWPIEGQPTSMVIFWSIVTRIGVAVILILRQERLKSLKYYFHLK"
     gene            complement(1571..1810)
                     /locus_tag="VLA74_15115"
     CDS             complement(1571..1810)
                     /locus_tag="VLA74_15115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52086.1"
                     /translation="MQIDVQRSHWSKKKIFVVVILISFGYGIWFNYLDSAKYCSDDGK
                     ICEDIGKILGGNAIYQPWNIIGHCIPGLFLLVMTP"
BASE COUNT          783 a          305 c          293 g          723 t
ORIGIN      
        1 aagcggattg gcaaaacatg gaaaatacaa atgatccagg ggaaaaatta tctgtagatt
       61 ggtctcccaa tgctaacaat gatgtattta caaatataat ggttggagtt aaacaattag
      121 caggaaagat cgaacaaggt ggagataccc gagtatttac tcctctatgg aattttaata
      181 atcctcaaaa aagtacttct gtaattcttc atcctttagg cggttgtaac atgggagaag
      241 atgtaaacaa tggagttgta aatagctatg gtcaggtatt ttggaatgac ggttcagcgg
      301 ataaaactaa agtttatcct aaattatatg tagttgatgg gtcaataata cctgagccgt
      361 taggtgtaaa tccttcatta actatatctg ctgtttcatt tagagcagca agacatattt
      421 tagttgatat ttctgaagtg cctttacctc cagaagaagc aaataaattt ttaccaaaat
      481 gagaagtaaa ttatgacttt tgaattaata gattatatgt aatctatctc tatattattt
      541 tattcaattc tactcttgaa actatataat gcattatcaa atatcaaatg tttcccgtta
      601 ggtatggtaa cataaatatt tcaaggtatg atattcttcg gcgccgaaaa atatcattat
      661 ttatactatt ttaaaaaaaa agatgaatga atgaacttat gaatttctgt aataacatca
      721 actatactga ctaacaaaag ttcgcttaca aattattttc aataaatatg tttattgtgc
      781 ttaaaatcag atgtttttga atgtagtaga tatgcgaatt tatcttagtt agtatactat
      841 gttatgttaa cataattctg ccaaaaaatt agatgttgcc gatggatcta taattcctac
      901 ttcattaggc gtgaatcctt ctctaactat aagtgcattg gcatttagaa tagcatctca
      961 tattgagcaa aatttacaat agtaactttc ggcatctttt tgtaattttc aaatcatctt
     1021 tttgggtcaa atttgtttca catccaacgg aaacagagac gaaaatagta ttaatccatt
     1081 gatttatgga atgtcaaagt atcaaattga actacaacat gataaaataa taacaaagga
     1141 taaaagatag tataattttg aggtgccgaa aaaatttatt atatgtattt ttttaaaaac
     1201 atatgaatag cttctgatgt gctataagca ataattatta ttttaaatga aagtaatact
     1261 ttaatgattt aagcctctcc tgtcttaaaa ttagaattac agcaacacca attcttgtaa
     1321 ctatactcca aaatataacc attgatgttg gttgaccttc aatgggccaa gaattttccc
     1381 aaacttgaca agtaccaatt ggattatagt aaaaaataat ccaatctaga agtgatggcg
     1441 tatcatgaat aacacagctc tcatcaacat tccacaaagg caaatcatgg gttaatctca
     1501 ttacacccca taatggtgaa tccattaccg aagacgatat taatacacct gctaaaaata
     1561 atccccatct ttacggagtc attacaagaa ggaaaagtcc aggaatacaa tgtccaataa
     1621 tattccatgg ttgataaatc gcattgccac caagaatttt tcctatatct tcgcatattt
     1681 taccatcatc agaacaatat ttagctgaat caagatagtt aaaccatatt ccatatccaa
     1741 atgaaatcaa aattactact acaaatatct tttttttact ccaatgactt ctttggacat
     1801 cgatttgcaa ttttataatt ctttgaaatt tattaaatat aaatatgatc cactatttaa
     1861 ccaacaaaac aaaaaaattt aaatctagat attattgagg tttaataatg gtattgttat
     1921 aaatattaat tattattgta catttaatag ataaaaaatc aacatatcaa tattttaaca
     1981 taattttcaa atcctaattt agatagaatt tacaaagcaa taatgatact gacaaagaat
     2041 taatttttac tttttgtaat tatttatttt ggaattgttt aactaaaatt gaaactgtag
     2101 gttg
//
LOCUS       DATIAS010000750         2112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1498470, whole genome shotgun sequence.
ACCESSION   DATIAS010000750 DATIAS010000000
VERSION     DATIAS010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498470"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..499
                     /locus_tag="VLA74_15120"
     CDS             20..499
                     /locus_tag="VLA74_15120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52087.1"
                     /translation="MEYSLVRKSNNNNRNIDIKLSSLVPSREDLKNLELSDLIIMASI
                     SYDFDYRFKYFFKRDAFTLSDPFKNPENHLYYLFADRDNRSNVISLVIIRNNINIEKG
                     TWDKIRGHDIAMLEIKSEQANDIKDELMPKDTNNFYPFRKDGKIVGYIMFAYQICGL"
     gene            complement(597..791)
                     /locus_tag="VLA74_15125"
     CDS             complement(597..791)
                     /locus_tag="VLA74_15125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52088.1"
                     /translation="MAINTNIEDTKNIKYGEERNLFAIALLLSSLVIAEFRVLFEVLI
                     LSIVIIIVTVFLKSIIISYT"
     gene            969..1319
                     /locus_tag="VLA74_15130"
     CDS             969..1319
                     /locus_tag="VLA74_15130"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF52089.1"
                     /translation="MNKGKHHKHIIRTIIRIPDHLWNEIKNILPDEKPENTIGRHIIP
                     YRKVLDGILFILRTGCQWKMLPKEYGSGSTCHRRFQEWRESDIFEKLWIKMLQIYDNK
                     IGIKWNWQSLVVNQ"
     gene            1407..1694
                     /locus_tag="VLA74_15135"
     CDS             1407..1694
                     /locus_tag="VLA74_15135"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSF52090.1"
                     /translation="MYPLSTVITSANTHDVTVAIDTVDNMVIKRQSSSSSSTTTSTDR
                     NNKKKQNLCLDKAYHSKEVEQEIIKRGYIPHIRHRREKNYFIQNILLGDGL"
     gene            1879..>2112
                     /locus_tag="VLA74_15140"
     CDS             1879..>2112
                     /locus_tag="VLA74_15140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52091.1"
                     /translation="MLESILLFVPLISVAIVSGLLVFAFINFSISRKNMQRQSEQQIA
                     NLKIQNEQEIYSRIIEARLKLENTEEFTKMASES"
BASE COUNT          839 a          290 c          322 g          661 t
ORIGIN      
        1 cttatgaata ggaataaaaa tggaatactc attagtaaga aaaagtaata ataataatag
       61 aaatatcgat ataaaacttt cgtctcttgt tccttcacga gaagacttaa aaaatcttga
      121 gctctctgat ttgatcatta tggcttccat ttcttatgat tttgattata gattcaaata
      181 tttttttaaa agagatgctt ttaccttatc tgaccctttt aaaaatcctg aaaatcattt
      241 atactattta tttgcggata gagacaatcg tagcaatgtt atatcactgg ttataataag
      301 aaataatatc aatatagaaa aaggtacttg ggataaaatc agaggtcatg atatagcgat
      361 gttagagatc aaatctgaac aagcaaatga cataaaagac gaattgatgc caaaagatac
      421 caataacttt tatcctttta gaaaagatgg aaaaatagta ggttatataa tgtttgcata
      481 tcaaatttgc ggtttataga atgcctttga atataagaca attcataagt gtcctattaa
      541 cggtctagaa gttatagtta catttacaca ggataaattt gatgcaaatg gaaagtttat
      601 gtataagata ttataataga ttttagaaat actgttacaa taataatcac aatagataat
      661 attaatacct cgaacaaaac tctaaactct gcgataacta atgatgataa caataaagca
      721 attgcaaata agtttctttc ttcaccatac ttaatatttt ttgtatcctc tatattggta
      781 tttattgcca taatccctgt tgtgatcaaa gaaaacataa tatataaaga ctactaaaat
      841 ataattctat gatgttttta tcttttagta tctaaataaa tttgcatctt attttagaac
      901 ttagagtcta tcccaacaat cggtaggaat atagctcctc tattttatca tctttattta
      961 tattacaatt gaacaaaggg aaacatcata aacatattat tagaacaatt atacgtattc
     1021 cagatcatct atggaatgaa attaaaaata ttttaccaga tgagaaaccg gagaatacaa
     1081 taggccgaca cattattcca tacagaaaag tacttgatgg tattctgttt atcctaagaa
     1141 caggatgtca atggaaaatg ttacctaaag agtatggttc tggttccaca tgtcatagaa
     1201 gattccagga atggagagaa tcagatatat ttgaaaaatt atggataaaa atgttacaaa
     1261 tatatgataa caagatagga attaaatgga attggcaatc tcttgtagta aatcagtaaa
     1321 atcaccttta ggggggagat gactggacat aatccaactg acaggagtaa attaggaacc
     1381 aaaagacaca ttctaactga taaaaattgt atcctctctc tactgttata acatctgcaa
     1441 atacccatga tgttactgtt gcaattgata cagttgataa tatggttatc aaaagacaat
     1501 catcatcatc atcatcaaca acaacatcaa cagacagaaa taacaaaaag aaacagaatc
     1561 tatgtctcga caaagcatat cattccaaag aagtagaaca agaaatcatc aaaagaggat
     1621 acataccaca tatacgacac agaagagaaa aaaattattt catacaaaat atcctgctag
     1681 gagatgggct gtagaaagaa ctaattcttg gcataacaga ttcaggaaat tatttacaag
     1741 atatgaaaag aaagaacaga actatctagg tcttgtacag ttagcaaata gtttaattgt
     1801 ttataggagg ttaattttgg gataggctct tagattagat gcaaagaaat agttatctgc
     1861 atttaaaata ttattatcat gcttgaatcg attttgctat ttgtaccatt gatctctgtc
     1921 gcaatagttt caggtcttct tgtatttgca ttcattaact tttcaatttc aagaaagaat
     1981 atgcaaagac agagtgaaca acaaatagct aatttaaaaa tacaaaatga gcaggagatt
     2041 tattctagaa taatagaggc tagacttaaa ctagaaaata ctgaagagtt tacaaaaatg
     2101 gcaagtgaaa gt
//
LOCUS       DATIAS010000751         3751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Nitrososphaeraceae archaeon isolate SMAG_U16270
            k141_1634015, whole genome shotgun sequence.
ACCESSION   DATIAS010000751 DATIAS010000000
VERSION     DATIAS010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935765
            Sequence Read Archive: SRR25158333
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Nitrososphaeraceae archaeon (soil metagenome)
  ORGANISM  Nitrososphaeraceae archaeon
            Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
            Nitrososphaeraceae.
REFERENCE   1  (bases 1 to 3751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 04:42:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 31
            tRNAs                             :: 31
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3751
                     /organism="Nitrososphaeraceae archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634015"
                     /isolate="SMAG_U16270"
                     /isolation_source="soil"
                     /db_xref="taxon:2169593"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..1416)
                     /locus_tag="VLA74_15145"
     CDS             complement(31..1416)
                     /locus_tag="VLA74_15145"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HSF52092.1"
                     /translation="MKFGGTLLDNEDKLRNVISVISSYYSEGHDIVVIISALNGITDK
                     ILDLCKDIKKINKNIINNFVDNIEIIHTSLIEKVITNSEKKTEILEIIANLLKEFKEI
                     LVGISILGEITPKSRDYLVSFGERLSTPIVSFSLMDKGLKSEFFNGKEIGILTDSNYG
                     DAKPLMDTTKLRVRHKIEPLIAEKIIPVITGFIGCDQNGNITTIGRGGSDYSATIIAA
                     SINADEVWLWSDTDGLMTADPKIVENAMMLDELSFSEALELSMFGPKYMHPRALEPVM
                     DSKIAVRIRNINNLKNSGTVILQNPLKNSTRTVKSITAIGHTALIDVSGGGLIGYPGT
                     AAKIFDALAKNQVNIMMISQTPSESSISIVVKKNDLDKAITTLELNFLGKLIKRIDVN
                     ENVAIIAVVGSGMRGIKGVAARTFGAVAKNNINVIMIAQGSSELNLAFVIDGHDRNKA
                     VKALHQEFIDK"
     gene            complement(1535..2287)
                     /gene="pcn"
                     /locus_tag="VLA74_15150"
     CDS             complement(1535..2287)
                     /gene="pcn"
                     /locus_tag="VLA74_15150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030337 - DNA polymerase processivity
                     factor activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proliferating cell nuclear antigen (pcna)"
                     /protein_id="HSF52093.1"
                     /translation="MIFVATTKTPEEWKAIASAISTLVDEATFEASIEGISFRGMDPS
                     HVALIDIFWPNSAFEKYECDSLVKFGVRIDEFSKLIKRSEKRDSVEISIDQNSMLSIK
                     IQNGYKKEYKMRLIESSSSSTPLPKLSFNSKIILSSNAFDKILSDIQVLSEYITIDAG
                     PETVSFLGRGDSGEVNILLEPKSEGLEELTSKEDSLATYSIDYLLKITKAISSVGGSV
                     IAEYSSKMPLRLEFTVASLGRIHFYLAPRIQD"
     gene            complement(2405..2749)
                     /locus_tag="VLA74_15155"
     CDS             complement(2405..2749)
                     /locus_tag="VLA74_15155"
                     /inference="COORDINATES: protein motif:HMM:TIGR01384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor S"
                     /protein_id="HSF52094.1"
                     /translation="MKFCPNCETRMRLKFDENQVICPKCDFRAEGNINGINLNTSSIT
                     GNTATIQDGNALRIMDGENNGEILPTINIDCPKCNNNLAVWWMLQTRSADEATTQFYR
                     CSKCNHTWRNYS"
     gene            complement(2751..3032)
                     /locus_tag="VLA74_15160"
     CDS             complement(2751..3032)
                     /locus_tag="VLA74_15160"
                     /inference="COORDINATES: protein motif:HMM:NF025040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoL/Rpb11 RNA polymerase subunit family
                     protein"
                     /protein_id="HSF52095.1"
                     /translation="MQAEISNLTDREMELKLKDEDISILYILQHHILNEKGVEFAGVI
                     VKHPLIKEFLLKITSKDNPLNILEKSIQTANDFAKNFSDSVESIFKQAK"
     gene            3090..3605
                     /locus_tag="VLA74_15165"
     CDS             3090..3605
                     /locus_tag="VLA74_15165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSF52096.1"
                     /translation="MQNNNRLENIVLTKTKNKISINETISLNLSFKISGSIRDLFTQS
                     TWEKAYNKFDNTFRIMIDADIKVGKKKIHSVKFLRKAIFFWARNPKIQHRIWVSIVKD
                     DSPFYPLSEHESRSLLFDVNKIIEFSISDLNQGIYNFHANVRVSWGKHNFTGALKLEG
                     ISNQEQIEIIH"
BASE COUNT         1210 a          654 c          523 g         1364 t
ORIGIN      
        1 aaatttatct ctttatgtgt tttcttgaat tcatttgtct ataaattctt gatgtaaagc
       61 tttaacagct ttgttacgat cgtgtccgtc tattacaaaa gctaagttca attctgagga
      121 accttgagca atcattatta cattaatatt gttttttgct accgcaccaa atgttcttgc
      181 tgccactcct tttattcctc tcattccaga ccccactact gctattatcg caacattttc
      241 atttacatct attcttttga ttaactttcc aagaaagttc aattccagcg ttgtaatagc
      301 cttatccaaa tcattttttt ttactacgat agaaatagag gattcagaag gtgtctgtga
      361 gatcatcatt atatttactt gattcttagc aagtgcatca aaaatttttg cagcagtacc
      421 aggatatcca attagccccc caccactgac atctattaat gctgtatgtc ctatagctgt
      481 gatagacttt actgttcttg ttgaattttt caatggattt tgtagaatta ctgtaccact
      541 attttttaaa ttatttatgt tcctaattct caccgctatt ttcgaatcca ttacaggttc
      601 aagtgctctt ggatgcatgt actttggacc aaacatcgat aactctaatg cttccgaaaa
      661 agataattca tcaagcatca tggcgttttc tactatcttc ggatctgcag tcattaatcc
      721 atcagtgtca ctccataacc acacctcatc agcatttatg ctggcagcta ttatagttgc
      781 agaatagtct gaaccccctc tacctatggt agtaatattt ccattttgat cacagccaat
      841 aaatcctgtt atcacgggga ttattttttc tgcaattaac ggttctatct tgtgacgaac
      901 ccttaatttt gttgtatcca taaggggctt ggcatctcca taatttgaat cagtaaggat
      961 tcctatttct tttccattaa aaaattctga ttttaatcct ttatccatta acgaaaaaga
     1021 cactattggt gttgatagcc tctcgccaaa agatacgagg tagtctctag attttggagt
     1081 tatctctcct aaaatcgaaa ttcctaccaa aatttctttg aattctttta gcagattcgc
     1141 tatgatttcc aatatttcag tctttttttc tgaattagtg attactttct ctatcaggct
     1201 agtatgaatg atttcgatat tatcgacaaa attattaata atattcttat taattttttt
     1261 aatgtcttta cataaatcca aaattttatc agttattcca tttagagcag aaattattac
     1321 aacaatatcg tggccttcag aataatatga gcttatgacg cttattacgt ttcggagctt
     1381 atcttcatta tcaagcaaag taccaccaaa cttcattaca attcgcatag ctgttatatt
     1441 ttcttgtttc ctagattaat ccttcgataa aattaattta cgaaaaaata ataatcaaaa
     1501 taattataat aatattatga tattgtcact aatttcaatc ttgaattcgt ggagcaagat
     1561 aaaaatgaat tcttcctaaa ctcgctacag taaactctaa tcgtaatggc atcttacttg
     1621 aatattctgc aataactgaa ccaccaacgc tgctaatagc tttagtaatt tttaagaggt
     1681 aatctatgct atacgtagct aaactgtctt cctttgaagt taattcttct aaaccttcgc
     1741 tttttggttc caggagtata tttacttctc cagaatctcc tcttccgaga aaactaacgg
     1801 tctcaggccc agcatctatc gttatatatt ctgacaggac ttgtatatct gaaagaattt
     1861 tatcaaaagc attagaggat aaaataattt tagaattaaa acttaatttt ggcaagggag
     1921 ttgaactaga agaactctca atcaaacgca ttttgtattc ctttttatat ccattttgta
     1981 ttttaataga taacatacta ttttggtcaa tcgatatctc gactgaatct cttttctcag
     2041 atcgttttat taattttgaa aattcgtcta tccttactcc aaattttaca agtgagtcac
     2101 attcatattt ttcaaaagcc gaattaggcc agaaaatatc aataagggca acatgcgagg
     2161 gatccattcc cctaaatgat atcccctcta ttgaagcttc aaaagtagcc tcatccacca
     2221 atgtggagat agcggaagct attgctttcc attcttcagg tgtttttgtc gttgctacaa
     2281 aaatcaatct aaatctatgt tttggctata ttttgagaac tttaaatctt cctattgtta
     2341 aaaaataaaa aattatttct gttttcccaa tcatttttga aaaagaccta gtaagttttt
     2401 aactttatga gtaatttctc catgtgtggt tacatttaga acatctatag aattgggttg
     2461 ttgcctcatc tgcagatcta gtttgcagca tccaccaaac ggctaaatta ttgttacatt
     2521 tagggcaatc aatgttgatt gttggtaaaa tttcaccatt attttcacca tccattattc
     2581 ttaatgcgtt tccatcctga attgtggcgg tatttccagt gattgagctt gtatttaggt
     2641 taatgccgtt gatattgcct tctgccctga aatcgcattt tggacaaata acctgatttt
     2701 cgtcaaactt taatctcatt cttgtttcac aattaggaca aaatttcatg ttatttcgcc
     2761 tgcttgaaaa ttgattcaac tgaatcagaa aaattctttg caaagtcgtt tgccgtttgt
     2821 atcgattttt ccagaatatt caaagggtta tctttagatg ttatctttaa caaaaattcc
     2881 tttattaaag gatgtttaac tataactcca gcaaattcta ctcctttttc attaagaata
     2941 tgatgttgaa gaatatataa tattgaaata tcttcatctt ttaattttag ttccatttct
     3001 ctatcagtta aatttgatat ctctgcctgc attaaagagt gaagtactta tttaggatat
     3061 aaatcatacc aaatagtatt taataattga tgcaaaataa taacagatta gaaaatatag
     3121 tactaactaa aacgaagaac aaaatttcaa ttaatgaaac aatttcacta aatctgagtt
     3181 ttaaaataag tggcagtatt cgtgatttat ttactcaatc aacttgggaa aaagcatata
     3241 ataaatttga taacacattc cgaataatga tagatgctga tattaaagtt ggaaagaaga
     3301 aaattcattc agtcaaattc ctacgtaaag caatcttttt ctgggcaagg aatcccaaaa
     3361 ttcagcatag aatttgggtg tcaattgtca aagatgactc tccattctat ccattatcag
     3421 aacacgaatc tagatcttta ttatttgatg taaacaagat aatagaattt agtatatctg
     3481 atttgaatca aggaatatac aattttcatg caaatgtgcg agtatcctgg ggaaaacata
     3541 attttactgg agcattaaaa ctagaaggaa tatcaaacca agagcaaatt gaaataatcc
     3601 attaacaata accaaacttt cataacaatt aaacatataa aatattaata tttctgactc
     3661 tagtcataga acctctttta aggaaaattt ataaaaatgt aataaatatt tggtagtgat
     3721 ggctaaattt gatggaataa aagggcagga a
//
